BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006842
         (629 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|296086512|emb|CBI32101.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/663 (67%), Positives = 507/663 (76%), Gaps = 73/663 (11%)

Query: 3   STSTISLYSHP-------------------KLSHRAQPVLSRS---------FCQARDAP 34
           STS I LYSHP                   ++SHRA+P   RS         +C    A 
Sbjct: 5   STSAICLYSHPMVLSSSSSQSPNLTFCSDSQISHRARPRNLRSQVLGSSWWGYC----AL 60

Query: 35  LSFALPFSGTRRCFRLKRLVVKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIAS 90
           L  ++  S  R  +R + LV  AA+  +G  R+    RRV++QSQ    L+  PV++IAS
Sbjct: 61  LPTSVYVSSIRH-YRFRTLVTVAASTADGVPRRPVSGRRVFKQSQGQGPLSPVPVREIAS 119

Query: 91  FVVPAGVFVSATFVLWKLVEKLLMPKPSRPSKPTA----EGMNWSVGAGTNLLSGFTGKL 146
           FVVPA +F + TFVLW+LVEK+L+PK SR S         G+ WS   GTNLL+G T K 
Sbjct: 120 FVVPASLFFAVTFVLWRLVEKILLPKSSRSSSLEKKSSSPGVKWSFAPGTNLLAGLTAKF 179

Query: 147 FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            RESKQ LNEFAKE+R+F SVDMSGRNFGDEGLFFLAESL YNQ AEEVSFAANGITAAG
Sbjct: 180 DRESKQKLNEFAKEIRSFGSVDMSGRNFGDEGLFFLAESLAYNQNAEEVSFAANGITAAG 239

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           +KAFDGVLQSNI LKTL+LSGNPIGDEG KCLCDIL+DNAG+++LQL+S DL DEGAKAI
Sbjct: 240 LKAFDGVLQSNIVLKTLDLSGNPIGDEGAKCLCDILIDNAGIQKLQLNSADLGDEGAKAI 299

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE+LK NS LR++ELNNNMIDYSGFTSL  ALLEN+TIR++HLNGNYGGALG  ALAKGL
Sbjct: 300 AEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGALGVAALAKGL 359

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           E NKSLRELHLHGNSIGDEG+R LMSGLSS KGKL +LDIGNN IS++GAFHVAEYIK  
Sbjct: 360 EANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVAEYIKKA 419

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           KSLLW+NLYMNDIGDEGAEKIADALK+NR+I TIDLGGNNIH+KG S IA VLKDN+VIT
Sbjct: 420 KSLLWLNLYMNDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIAGVLKDNTVIT 479

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +L+L YNPIG +GAKALSEVLKFHG I TLKLGWCQIGA GAEF+AD L+YN TIS LDL
Sbjct: 480 TLELGYNPIGPEGAKALSEVLKFHGKIKTLKLGWCQIGAKGAEFIADTLKYNTTISTLDL 539

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSID 566
           RANGLRDE                                GA CLA+S KVVNEAL S+D
Sbjct: 540 RANGLRDE--------------------------------GAVCLARSMKVVNEALASLD 567

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVN 626
           L FNEIRD+GAFAIAQALKANEDVAVTSLNLA+NFLTKFGQSALTDA+D VYEMSEKEVN
Sbjct: 568 LGFNEIRDEGAFAIAQALKANEDVAVTSLNLASNFLTKFGQSALTDARDHVYEMSEKEVN 627

Query: 627 IFF 629
           IFF
Sbjct: 628 IFF 630


>gi|255558382|ref|XP_002520218.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223540710|gb|EEF42273.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 607

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/646 (68%), Positives = 499/646 (77%), Gaps = 56/646 (8%)

Query: 1   MGSTSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRC---------FRLK 51
           MGS ST SLY HPK+S R Q     S  +     LSF    + +             R +
Sbjct: 1   MGSISTHSLYFHPKISLRLQ-----SEPRVHGGLLSFPNTIATSFTTTTTSRRRNFLRFR 55

Query: 52  RLVVKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWK 107
            L V+AAA  +GG R+    RRVYRQSQ ++AL  APV+QIAS V+PAG F+  TFVLWK
Sbjct: 56  SLTVRAAA--DGGSRRAASGRRVYRQSQGESALPNAPVQQIASVVMPAGAFLVVTFVLWK 113

Query: 108 LVEKLLMPKPSRPS----KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRA 163
           LVEK++MPKP R +    K  ++GMNWS  AG+NL  G T K+ RESKQ LNEFAKELR+
Sbjct: 114 LVEKMMMPKPKRAAIVENKSPSKGMNWSFAAGSNLFPGLTAKIDRESKQKLNEFAKELRS 173

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           FS VDMSG NFGDEGLFFLAES+ YNQT EEVSFAANGITA G+KAFD VLQSNI LKTL
Sbjct: 174 FSIVDMSGCNFGDEGLFFLAESIAYNQTLEEVSFAANGITAEGVKAFDRVLQSNIVLKTL 233

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLSGNPIGD+G K L DIL DNAG+E+LQL+S DL DEGAKAIA+LLK N  LRV+ELNN
Sbjct: 234 NLSGNPIGDDGAKSLSDILADNAGIEKLQLNSTDLGDEGAKAIADLLKKNPNLRVIELNN 293

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           NMIDYSGFTSLA + LEN+T+RS++LNGNYGGALGANAL+KG+EGNK+LRELHL GNSIG
Sbjct: 294 NMIDYSGFTSLAGSFLENATLRSIYLNGNYGGALGANALSKGIEGNKALRELHLQGNSIG 353

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           DEG+RALMSGLSS K KL  LDIGNNS+SAKGAFHVAEYIK  KSL W+N+YMNDIGDEG
Sbjct: 354 DEGVRALMSGLSSSKAKLTHLDIGNNSLSAKGAFHVAEYIKKSKSLFWMNMYMNDIGDEG 413

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           AEKIADALKQNR++  IDLGGNNIH+KG S IA+VLKDNS+IT+L++ YNPIG DGAKAL
Sbjct: 414 AEKIADALKQNRSLANIDLGGNNIHAKGISEIAQVLKDNSIITTLEVGYNPIGPDGAKAL 473

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
           SEVLKFHGN+  LKLGWCQIGA GAE +AD L+YNNTISILDLR NGLRDE         
Sbjct: 474 SEVLKFHGNVKALKLGWCQIGAKGAEDIADTLKYNNTISILDLRGNGLRDE--------- 524

Query: 524 FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
                                  GA CLA+S  VVNE LT +DL FNEIRDDGAFAIAQA
Sbjct: 525 -----------------------GAICLARSLTVVNEVLTELDLGFNEIRDDGAFAIAQA 561

Query: 584 LKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           LKANEDV +TSLNLANNFLTKFGQSAL+DA+D VYEM+EKEVNI F
Sbjct: 562 LKANEDVKITSLNLANNFLTKFGQSALSDARDHVYEMNEKEVNIVF 607


>gi|359473416|ref|XP_002266381.2| PREDICTED: protein NLRC3-like [Vitis vinifera]
          Length = 684

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/632 (69%), Positives = 496/632 (78%), Gaps = 54/632 (8%)

Query: 15  LSHRAQPVLSRS---------FCQARDAPLSFALPFSGTRRCFRLKRLVVKAAARPEGGR 65
           +SHRA+P   RS         +C     P S    +  + R +R + LV  AA+  +G  
Sbjct: 90  ISHRARPRNLRSQVLGSSWWGYCAL--LPTSV---YVSSIRHYRFRTLVTVAASTADGVP 144

Query: 66  RQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPSRPS 121
           R+    RRV++QSQ    L+  PV++IASFVVPA +F + TFVLW+LVEK+L+PK SR S
Sbjct: 145 RRPVSGRRVFKQSQGQGPLSPVPVREIASFVVPASLFFAVTFVLWRLVEKILLPKSSRSS 204

Query: 122 KPTA----EGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDE 177
                    G+ WS   GTNLL+G T K  RESKQ LNEFAKE+R+F SVDMSGRNFGDE
Sbjct: 205 SLEKKSSSPGVKWSFAPGTNLLAGLTAKFDRESKQKLNEFAKEIRSFGSVDMSGRNFGDE 264

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           GLFFLAESL YNQ AEEVSFAANGITAAG+KAFDGVLQSNI LKTL+LSGNPIGDEG KC
Sbjct: 265 GLFFLAESLAYNQNAEEVSFAANGITAAGLKAFDGVLQSNIVLKTLDLSGNPIGDEGAKC 324

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           LCDIL+DNAG+++LQL+S DL DEGAKAIAE+LK NS LR++ELNNNMIDYSGFTSL  A
Sbjct: 325 LCDILIDNAGIQKLQLNSADLGDEGAKAIAEMLKKNSSLRIVELNNNMIDYSGFTSLGGA 384

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           LLEN+TIR++HLNGNYGGALG  ALAKGLE NKSLRELHLHGNSIGDEG+R LMSGLSS 
Sbjct: 385 LLENNTIRNIHLNGNYGGALGVAALAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSH 444

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
           KGKL +LDIGNN IS++GAFHVAEYIK  KSLLW+NLYMNDIGDEGAEKIADALK+NR+I
Sbjct: 445 KGKLTLLDIGNNEISSRGAFHVAEYIKKAKSLLWLNLYMNDIGDEGAEKIADALKENRSI 504

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
            TIDLGGNNIH+KG S IA VLKDN+VIT+L+L YNPIG +GAKALSEVLKFHG I TLK
Sbjct: 505 ATIDLGGNNIHAKGVSKIAGVLKDNTVITTLELGYNPIGPEGAKALSEVLKFHGKIKTLK 564

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
           LGWCQIGA GAEF+AD L+YN TIS LDLRANGLRDE                       
Sbjct: 565 LGWCQIGAKGAEFIADTLKYNTTISTLDLRANGLRDE----------------------- 601

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
                    GA CLA+S KVVNEAL S+DL FNEIRD+GAFAIAQALKANEDVAVTSLNL
Sbjct: 602 ---------GAVCLARSMKVVNEALASLDLGFNEIRDEGAFAIAQALKANEDVAVTSLNL 652

Query: 598 ANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           A+NFLTKFGQSALTDA+D VYEMSEKEVNIFF
Sbjct: 653 ASNFLTKFGQSALTDARDHVYEMSEKEVNIFF 684


>gi|356501981|ref|XP_003519801.1| PREDICTED: protein NLRC3-like [Glycine max]
          Length = 606

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/639 (67%), Positives = 504/639 (78%), Gaps = 43/639 (6%)

Query: 1   MGSTSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRCFRLKRLVVKAAAR 60
           M  TST+S+YSHP++    Q + S  F  A  A  +  LP    RR    +  V + ++ 
Sbjct: 1   MAFTSTLSIYSHPQVRLLNQRLQSLPFTAAGVAQFA-PLPPLNRRRTCSPRSFVFRVSSS 59

Query: 61  PEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPK 116
            EG R +    RRVYRQSQ+   L++APVKQIA+ V P   F + TFV+WKLVEKLL+P 
Sbjct: 60  VEGSRARSGGSRRVYRQSQASAPLSSAPVKQIANVVAPVAAFFALTFVIWKLVEKLLVPT 119

Query: 117 PSR------PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
           P +       S+  ++G+ WS  AGTNLLS    K+ R+SKQ LNEFA+ELR+FSS+DMS
Sbjct: 120 PKQLKSLTVESQSPSQGLKWSFAAGTNLLSQLGEKIERQSKQKLNEFARELRSFSSIDMS 179

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
           GRNFGDEGLFFLAESL +NQTAEEVSFAANGITAAG++AFDGVLQSNI LKTL+LSGN +
Sbjct: 180 GRNFGDEGLFFLAESLAFNQTAEEVSFAANGITAAGLRAFDGVLQSNITLKTLDLSGNLV 239

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GDEG KCLCDILV+N+ +E+LQL+S DL DEGAKAIAE+LK NS LRVLELNNNMI+YSG
Sbjct: 240 GDEGAKCLCDILVNNSSIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSG 299

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F+SLA ALLEN++IR++HLNGNYGGALGANALAK LE NKSLRELHLHGNSIGDEGIR+L
Sbjct: 300 FSSLAGALLENNSIRNIHLNGNYGGALGANALAKALESNKSLRELHLHGNSIGDEGIRSL 359

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           M+GLSS KGKL +LDIGNNS++AKGAFHVAEYIK  KSLLW+NLYMNDIGDEGAEKIA A
Sbjct: 360 MTGLSSHKGKLTLLDIGNNSLTAKGAFHVAEYIKKSKSLLWLNLYMNDIGDEGAEKIAVA 419

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK+NR+I+T+DLGGNNIH  G +AIA+VLKDN VIT+L+L+YNPIG DGAKAL+EVLKFH
Sbjct: 420 LKENRSISTLDLGGNNIHVDGVNAIAQVLKDNLVITTLELSYNPIGPDGAKALAEVLKFH 479

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY 530
           GNI TLKLGWCQIGA GAEF+AD L+YN TISILDLRANGLRDE                
Sbjct: 480 GNIKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDE---------------- 523

Query: 531 SLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
                           GA+ LA+S KVVNEALTS+DL FNEIRDDGAFAIAQALK+N+DV
Sbjct: 524 ----------------GAQSLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDV 567

Query: 591 AVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           AVTSLN+ +NFLTKFGQ AL DA+D V EM+EKE+NIF 
Sbjct: 568 AVTSLNIGSNFLTKFGQGALADARDHVLEMTEKEINIFL 606


>gi|357486129|ref|XP_003613352.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
 gi|355514687|gb|AES96310.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
          Length = 606

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/637 (67%), Positives = 498/637 (78%), Gaps = 44/637 (6%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRCFRL----KRLVVKAA 58
           STST+SLYSHP+          +S   A  A     LP    RR F L    +R VVKA 
Sbjct: 4   STSTLSLYSHPQPPQLRLRRRLQSL--AGTAIQFVILPTLNRRRPFGLGAGSRRFVVKAE 61

Query: 59  ARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPS 118
                    RRVYR+SQ+D  L+ A VKQIA+ V P GVF++ T V+WKLVEKL+ P P 
Sbjct: 62  GTSARASGSRRVYRESQADATLSVASVKQIATNVAPFGVFLALTIVIWKLVEKLVAPTPK 121

Query: 119 RPSKPTAE------GMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGR 172
           +    TAE      G+ WS  AGTNLLS    K+  +SKQ LNEFA+ELR+FS  DMSGR
Sbjct: 122 QSKSTTAESQSASQGLKWSFAAGTNLLSQLGAKIDSQSKQKLNEFARELRSFSYTDMSGR 181

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           NFGDEGLFFLAESL +NQ AEEVSFAANGITAAG+KAFDGVLQSNI LKTL+LSGNP+GD
Sbjct: 182 NFGDEGLFFLAESLAFNQNAEEVSFAANGITAAGMKAFDGVLQSNITLKTLDLSGNPVGD 241

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EG KCLCDIL+ N+ +E+LQL+S DL DEGAKAIAE+LK NS LRVLELNNNMI+YSGFT
Sbjct: 242 EGAKCLCDILMGNSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFT 301

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           SLA ALLEN++IR++HLNGNYGGALG NALAK LEGNKS+RELHLHGNSIGDEGIR+LM+
Sbjct: 302 SLAGALLENNSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMT 361

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
           GL+S KGKL +LDIGNNS++AKGAF+VA YIK  KSLLW+N+YMNDIGDEGAEK+ADALK
Sbjct: 362 GLTSHKGKLTLLDIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALK 421

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +NR+ITT+D+GGNNIH+ G  A+A+VLKDNSVIT+L+L+YNPIG DGAKAL+EV+KFHGN
Sbjct: 422 ENRSITTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEVIKFHGN 481

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           + TLKLGWCQIGA GAEF+AD L+YN TIS+LDLRANGLRDE                  
Sbjct: 482 VKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDE------------------ 523

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                         GA CLA+S KVVNEALTS+DL FNEIRDDGAFAIAQALK+NEDVAV
Sbjct: 524 --------------GALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNEDVAV 569

Query: 593 TSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           TSLN+ +NFLTKFGQSAL+DA+D V+EM+EKE+ IFF
Sbjct: 570 TSLNIGSNFLTKFGQSALSDARDHVFEMTEKEIAIFF 606


>gi|297843864|ref|XP_002889813.1| EMB2004 [Arabidopsis lyrata subsp. lyrata]
 gi|297335655|gb|EFH66072.1| EMB2004 [Arabidopsis lyrata subsp. lyrata]
          Length = 605

 Score =  840 bits (2170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/635 (67%), Positives = 496/635 (78%), Gaps = 42/635 (6%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLS----FALPFSGTRRCFRLKRLVVKAA 58
           STS+++L+S PK S       S    +   + +S       P     R  RL    +KAA
Sbjct: 5   STSSLNLHSLPKASSGLSQWRSGFRYELLGSSVSRNRLLVSPVVILHRSPRLP--AIKAA 62

Query: 59  ARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPS 118
              +GG ++ RVY++SQ+ +    A ++QIAS ++P G F   TFVLWK+VEK + PK  
Sbjct: 63  YNSDGGSKRSRVYKESQAASGFPNAKLQQIASSLLPLGSFAVVTFVLWKVVEKFMSPKSP 122

Query: 119 RPS----KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNF 174
           + +    K + +G+ WS+GAGTNLL GF  K+ RE+KQ LNEFAKELR+F SVDMSG NF
Sbjct: 123 KTAAGENKSSTQGVKWSIGAGTNLLQGFAAKVDREAKQRLNEFAKELRSFRSVDMSGCNF 182

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEGLFFLAESLGYNQT EEVSF+ANGITAAG+KAFDGVLQSNI LK LNLSGNPIGDEG
Sbjct: 183 GDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKVLNLSGNPIGDEG 242

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            K LC  L++N+ +E LQL+S D+ DEGAK IAELLK NS LR++ELNNNMIDYSGFTSL
Sbjct: 243 AKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSL 302

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A ALLEN+TIR+LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG RALM+GL
Sbjct: 303 AGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGL 362

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           SS KGKLA+LD+GNNSISAKGAF+VAEYIK  KSL+W+NLYMNDIGDEGAEKIADALKQN
Sbjct: 363 SSHKGKLALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADALKQN 422

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           R+I TIDLGGNNIH++G +AIA+ LKDN++IT+L++ YNPIG DGAKALSE+LKFHGN+ 
Sbjct: 423 RSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVK 482

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           TLKLGWCQI A GAE VADMLRYNNTIS+LDLRANGLRDE                    
Sbjct: 483 TLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDE-------------------- 522

Query: 535 MLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
                       GA CLA+S KVVNEALTS+DL FNEIRDDGAFAIAQALKANEDV VTS
Sbjct: 523 ------------GASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQALKANEDVTVTS 570

Query: 595 LNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           +NL NNF+TKFGQSALTDA+D V EM+EKEV IFF
Sbjct: 571 INLGNNFITKFGQSALTDARDHVLEMTEKEVEIFF 605


>gi|18391166|ref|NP_563871.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein [Arabidopsis thaliana]
 gi|15810395|gb|AAL07085.1| unknown protein [Arabidopsis thaliana]
 gi|20258921|gb|AAM14154.1| unknown protein [Arabidopsis thaliana]
 gi|332190466|gb|AEE28587.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein [Arabidopsis thaliana]
          Length = 605

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/635 (67%), Positives = 495/635 (77%), Gaps = 42/635 (6%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLS----FALPFSGTRRCFRLKRLVVKAA 58
           STS+++L+S PK S       S    +   + +S    F  P     R  RL    +KAA
Sbjct: 5   STSSLNLHSLPKASSGLGQWKSGFRYELLGSSVSRNRLFVSPVVIHHRSPRLP--AIKAA 62

Query: 59  ARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPS 118
              +GG ++ RVY++SQ+ +    A V+QIAS V+P G F   TFVLWK+V K + PK  
Sbjct: 63  YNSDGGSKRSRVYKESQAASGFPNAKVQQIASSVLPLGSFAVVTFVLWKVVGKFMSPKSP 122

Query: 119 RPS----KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNF 174
           + S      + +G+ WS+GAGTNLL GF  K+ RE+KQ LNEFAKELR+F SVDMSG NF
Sbjct: 123 KTSAGENNSSTQGVKWSIGAGTNLLQGFAAKVDREAKQRLNEFAKELRSFRSVDMSGCNF 182

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEGLFFLAESLGYNQT EEVSF+ANGITAAG+KAFDGVLQSNI LK LNLSGNPIGDEG
Sbjct: 183 GDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEG 242

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            K LC  L++N+ +E LQL+S D+ DEGAK IAELLK NS LR++ELNNNMIDYSGFTSL
Sbjct: 243 AKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSL 302

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A ALLEN+TIR+LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG RALM+GL
Sbjct: 303 AGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGL 362

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           SS KGK+A+LD+GNNSISAKGAF+VAEYIK  KSL+W+NLYMNDIGDEGAEKIAD+LKQN
Sbjct: 363 SSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQN 422

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           R+I TIDLGGNNIH++G +AIA+ LKDN++IT+L++ YNPIG DGAKALSE+LKFHGN+ 
Sbjct: 423 RSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVK 482

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           TLKLGWCQI A GAE VADMLRYNNTIS+LDLRANGLRDE                    
Sbjct: 483 TLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDE-------------------- 522

Query: 535 MLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
                       GA CLA+S KVVNEALTS+DL FNEIRDDGAFAIAQALKANEDV VTS
Sbjct: 523 ------------GASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQALKANEDVTVTS 570

Query: 595 LNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           +NL NNF+TKFGQSALTDA+D V EM+EKEV IFF
Sbjct: 571 INLGNNFITKFGQSALTDARDHVLEMTEKEVEIFF 605


>gi|356498020|ref|XP_003517853.1| PREDICTED: protein NLRC3-like [Glycine max]
          Length = 606

 Score =  837 bits (2162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/639 (66%), Positives = 505/639 (79%), Gaps = 43/639 (6%)

Query: 1   MGSTSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRCFRLKRLVVKAAAR 60
           M  TST+SLYSHP++  R Q + S +F  A  A  +  LP    RR    +  VV+A++ 
Sbjct: 1   MAFTSTLSLYSHPQVRLRCQRLQSLAFTAAGVAQFA-PLPPLNCRRTCSPRSFVVRASSS 59

Query: 61  PEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPK 116
            EG R +    RRVYRQSQ++  L++APVKQIA+ V P   F + TFV+WKLVEKLL+P 
Sbjct: 60  VEGSRARAGGSRRVYRQSQANAPLSSAPVKQIANVVAPVAAFFALTFVIWKLVEKLLVPT 119

Query: 117 PSR------PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
           P +       S+  ++G+ WS  AGTNLLS    K+ R+S+Q LNEFA+ELR+F S+DMS
Sbjct: 120 PKQLKYSTGESQSPSQGLKWSFAAGTNLLSQLGEKIERQSRQKLNEFARELRSFPSIDMS 179

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
           GRNFGDEGLFFLAESL +NQ AEEVSFAANGITAAG++AFDGVLQSNI LKTL+LSGN +
Sbjct: 180 GRNFGDEGLFFLAESLAFNQIAEEVSFAANGITAAGLRAFDGVLQSNITLKTLDLSGNLV 239

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GDEG KCLCDILV+N+ +E+LQL+S DL D GAKAIAE+LK NS LRVLELNNNMI+YSG
Sbjct: 240 GDEGAKCLCDILVNNSSIEKLQLNSADLGDVGAKAIAEMLKKNSSLRVLELNNNMIEYSG 299

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F+SLA ALLEN++IR++HLNGNYGGALGANALAK LE NKS+RELHLHGNSIGDEGI +L
Sbjct: 300 FSSLAGALLENNSIRNIHLNGNYGGALGANALAKALESNKSIRELHLHGNSIGDEGICSL 359

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           M+GLSS KGKL +LDIGNNS++AKG+FHVAEYI+  ++LLW+NLYMNDIGDEGAEKIA A
Sbjct: 360 MTGLSSHKGKLTLLDIGNNSLTAKGSFHVAEYIRKSRNLLWLNLYMNDIGDEGAEKIAVA 419

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK+NR+I+T+DLGGNNIH  G +AIA+VLKDN VIT+L+L+YNPIG DGAKAL+EVLKFH
Sbjct: 420 LKENRSISTLDLGGNNIHVDGVNAIAQVLKDNLVITTLELSYNPIGPDGAKALAEVLKFH 479

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY 530
           GNI TLKLGWCQIGA GAE +AD L+YN TISILDLRANGLRDE                
Sbjct: 480 GNIKTLKLGWCQIGAKGAECIADALKYNTTISILDLRANGLRDE---------------- 523

Query: 531 SLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
                           GA+ LA+S KVVNEALTS+DL FNEIRDDGAFAIAQALK+N+DV
Sbjct: 524 ----------------GAQSLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDV 567

Query: 591 AVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           AVTSLN+A+NFLTKFGQ AL DA+D V EM+EKE+NIF 
Sbjct: 568 AVTSLNIASNFLTKFGQGALADARDHVLEMTEKEINIFL 606


>gi|258678027|gb|ACV87735.1| chloroplast envelope protein 1 [Nicotiana benthamiana]
          Length = 614

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/648 (64%), Positives = 497/648 (76%), Gaps = 53/648 (8%)

Query: 1   MGSTSTISLYSHP---------KLSHRAQPVLSRSFCQARDAPLSFALPFSGT---RRCF 48
           MGS ST+SL SH          KL       L+ S+      P+S +L FS +    +C 
Sbjct: 1   MGSASTLSLCSHSTVNFEFYRRKLGFGRDQALNSSYSSYVLLPISPSLYFSSSCSRSKCL 60

Query: 49  RLKRLVVKAAARPEGGRRQRR----VYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFV 104
           +LKR++V+A++    G R+      VY++SQ+     T PV QIASFVVPAG FV  +FV
Sbjct: 61  QLKRVIVRASSSSSTGSRRSSSSRRVYKESQAQPP--TLPVDQIASFVVPAGAFVVISFV 118

Query: 105 LWKLVEKLLMPKPSRPS---KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKEL 161
           LWKLVEK+L PKP+R S     + EG+ W +  GTNLL GF  K+ RESK  LNEFAKEL
Sbjct: 119 LWKLVEKILQPKPARTSAEESKSTEGVKWFIAPGTNLLPGFGEKIERESKLRLNEFAKEL 178

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+FS VDMSGRNFG++GL FLAESL YNQTAEEV+FAANGITA G+KAFDG+LQSNIALK
Sbjct: 179 RSFSIVDMSGRNFGNDGLIFLAESLAYNQTAEEVNFAANGITAEGLKAFDGILQSNIALK 238

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TLNLSGN IGDEG KCLC+IL +N+G+++LQL+S  L DEGAKAI E+LK NS LRV+EL
Sbjct: 239 TLNLSGNAIGDEGAKCLCEILANNSGIQKLQLNSTGLGDEGAKAIGEMLKTNSTLRVVEL 298

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NNN IDYSGF+ LA +LLEN +++SLHLNGNYGG LGA ALAKGLEGNKSLREL+L GNS
Sbjct: 299 NNNQIDYSGFSGLAGSLLENKSLQSLHLNGNYGGPLGAAALAKGLEGNKSLRELYLQGNS 358

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGDEG+RAL+SGLSSRKGKL +LD+ NNSI+A+GA+HVAEY K  KSLLW+NLYMNDI D
Sbjct: 359 IGDEGVRALISGLSSRKGKLVLLDMANNSITARGAYHVAEYAKKSKSLLWLNLYMNDIKD 418

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGAEKIA+ALK+NR+IT IDLGGN+IH+KG SA+A VLKDNSVITSL+L YNPIG +GAK
Sbjct: 419 EGAEKIAEALKENRSITNIDLGGNDIHAKGISALAEVLKDNSVITSLELGYNPIGPEGAK 478

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           AL+EVLKFHGN+  L LGWCQIGA GAE +ADML+YN+TIS LDLRANGLRDE       
Sbjct: 479 ALAEVLKFHGNVKDLMLGWCQIGAKGAEAIADMLKYNSTISNLDLRANGLRDE------- 531

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
                                    GA CLA+S KVVNEALT+++L FNEIRD+GAF+IA
Sbjct: 532 -------------------------GAICLARSLKVVNEALTTLNLGFNEIRDEGAFSIA 566

Query: 582 QALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           QALKANEDV +TS+NL +NFLTK GQ+ALTDA+D V+EM+EKE+ + F
Sbjct: 567 QALKANEDVRLTSINLTSNFLTKLGQTALTDARDHVFEMTEKELAVMF 614


>gi|449452044|ref|XP_004143770.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Cucumis
           sativus]
          Length = 602

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/635 (64%), Positives = 485/635 (76%), Gaps = 45/635 (7%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFA----LPFSGTRRCFRLKRLVVKAA 58
           STSTIS  SHPK+  R   + S             A    L  +   R FRL+ LV+KA 
Sbjct: 5   STSTISFCSHPKIFLRLHSLGSPRVGFGASGLNYHANGAFLSVTHRTRGFRLRNLVLKAT 64

Query: 59  ARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLM 114
            R + G R+    RRVYR SQ+ ++   APVKQ+AS V+PAGV V  TFVLWKLVE+L++
Sbjct: 65  LRSDSGSRRAATSRRVYRDSQTQSSSLVAPVKQLASTVLPAGVLVVFTFVLWKLVERLMV 124

Query: 115 PKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNF 174
            K  + S       ++  GAG NL      K+ RE+K  LN+FAKELR F SVDM+ RNF
Sbjct: 125 QKSDKSSSSVKNKWSF--GAGINLFPDLAAKVDREAKLKLNDFAKELRTFRSVDMTARNF 182

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEGLFFLAESLGYNQT EEV+F+ANGITA GIKAFDGVLQSNI LKTL+LSGNPIGD+G
Sbjct: 183 GDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLSGNPIGDDG 242

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           VK LCD+LV+N+ +E L+L+S D+ DEGAKA++E+LKNNS LR++ELNNNMIDYSGFTSL
Sbjct: 243 VKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRIIELNNNMIDYSGFTSL 302

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
               LEN+TIR++HL GNYGGALGANALAKGLEGNKSLRELHL+GNSIGDEG+R L+SGL
Sbjct: 303 X---LENNTIRNIHLTGNYGGALGANALAKGLEGNKSLRELHLNGNSIGDEGVRTLISGL 359

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           SSRKGKLA+LDIGNNSI+AKGAFHVAE++K  KSL+ +NLYMNDIGDEGAEKIAD+LKQN
Sbjct: 360 SSRKGKLALLDIGNNSITAKGAFHVAEFVKRTKSLVLLNLYMNDIGDEGAEKIADSLKQN 419

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           RTI T+DLGGNNIH +G S +A+ LKDN  IT+L+++YNPIG +GA+ALSEVLKFHGN+ 
Sbjct: 420 RTIKTLDLGGNNIHGEGISKVAQALKDNDTITTLEISYNPIGPEGAEALSEVLKFHGNVK 479

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
            LKLGWC+IG  GAEF+A+ L+YN TIS+LDLR NGLRDE                    
Sbjct: 480 NLKLGWCKIGPKGAEFIAETLKYNTTISVLDLRGNGLRDE-------------------- 519

Query: 535 MLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
                       GA CLA+S KVVNEALTS+DL FNEIRD GAFAIAQALKAN D+AVTS
Sbjct: 520 ------------GATCLARSLKVVNEALTSLDLGFNEIRDPGAFAIAQALKANGDIAVTS 567

Query: 595 LNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           LNLANNFLTKFGQSALTDA+D V+EM E+EV I +
Sbjct: 568 LNLANNFLTKFGQSALTDARDHVHEMCEREVCISY 602


>gi|343172599|gb|AEL99003.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/580 (65%), Positives = 454/580 (78%), Gaps = 38/580 (6%)

Query: 49  RLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKL 108
           RL+   V+AA+   G  R RR YR+SQ+ N L   PVK+ A+ V PAGVF++ +FVLWKL
Sbjct: 47  RLRYTSVRAASGSSG--RSRRAYRESQAQNPLPIGPVKEFATAVAPAGVFLALSFVLWKL 104

Query: 109 VEKLLMPKPSR----PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAF 164
           V K+L+PKP +     +KP+     WS   G+NL    + K+ R+SK  L++FA+ELR+F
Sbjct: 105 VGKVLLPKPQKFTTAENKPSTPATKWSFAPGSNLFKNLSQKIERDSKLKLDDFARELRSF 164

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
             VDMSGRNFGD+GL FLAESL YN+  EEV F+ANGITAAG+KAFDG+LQSN  LKTLN
Sbjct: 165 RIVDMSGRNFGDDGLIFLAESLAYNKAVEEVDFSANGITAAGLKAFDGILQSNFFLKTLN 224

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LSGNPIGDEG KCLC+ILV N G+++LQL+S  L DEGAKAIA+LL+ NS L  +ELNNN
Sbjct: 225 LSGNPIGDEGAKCLCEILVSNTGIQKLQLNSTGLGDEGAKAIAQLLRKNSNLTAIELNNN 284

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            IDYSGF S+A ALLENSTIR+LHLNGNYGG LG  ALAKGLEGNKS+ ELHLHGN++G+
Sbjct: 285 TIDYSGFASIAGALLENSTIRALHLNGNYGGTLGVAALAKGLEGNKSVSELHLHGNAMGN 344

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           EG+R+LMSGLS+RKG++ +LDI NN I ++GAFH+AEY+K  KSLLW+N+YMNDIGDEGA
Sbjct: 345 EGVRSLMSGLSARKGRMTLLDISNNEIGSRGAFHIAEYVKKTKSLLWLNVYMNDIGDEGA 404

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           EKIADALKQNR+ITTIDLGGNNIH++G + IA +LKDN+VIT+L++AYNP G DGAKA+S
Sbjct: 405 EKIADALKQNRSITTIDLGGNNIHARGITCIAEILKDNNVITTLEIAYNPFGPDGAKAIS 464

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           EVLKFHGN+ TLKLGWCQIG  GAEF+ADM++YN TIS LDLRANGL D+          
Sbjct: 465 EVLKFHGNVKTLKLGWCQIGRQGAEFIADMIKYNTTISTLDLRANGLMDD---------- 514

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                 GA CLAQS KVVNEALTS+DL FNEIRD GAFAIAQAL
Sbjct: 515 ----------------------GAVCLAQSLKVVNEALTSVDLGFNEIRDTGAFAIAQAL 552

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKE 624
           KANEDVA+TS+NL++NF+TK GQSALTDA D V EM+ KE
Sbjct: 553 KANEDVALTSINLSSNFITKLGQSALTDASDHVMEMNGKE 592


>gi|224100227|ref|XP_002311795.1| predicted protein [Populus trichocarpa]
 gi|222851615|gb|EEE89162.1| predicted protein [Populus trichocarpa]
          Length = 490

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/522 (73%), Positives = 425/522 (81%), Gaps = 38/522 (7%)

Query: 114 MPKPSRPSKPTAE------GMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSV 167
           MPKP+R S   AE      GM WS   GTNLLSGFT K+ RESKQ LNEFAK+LRAF SV
Sbjct: 1   MPKPARSSLSAAENKSPEKGMKWSFAPGTNLLSGFTAKVDRESKQKLNEFAKQLRAFRSV 60

Query: 168 DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           DMSG NFGDEGLFFLAESL YNQ  EEVSFAANGITA G KAFD VLQSNI+LKTLN+SG
Sbjct: 61  DMSGCNFGDEGLFFLAESLAYNQILEEVSFAANGITAEGTKAFDRVLQSNISLKTLNISG 120

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           NPIGDEG K LC+ILVDN G+E+LQL+S DL DEGAKAIA+LLK +S LRV+ELNNNMID
Sbjct: 121 NPIGDEGAKILCEILVDNVGIEKLQLNSADLGDEGAKAIADLLKKSSTLRVVELNNNMID 180

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
           YSGFTSLA ALLEN+ +RS++LNGNYGGALGANALAKGLEGNKSLRELHL GNSIGDEG+
Sbjct: 181 YSGFTSLAGALLENNAVRSIYLNGNYGGALGANALAKGLEGNKSLRELHLQGNSIGDEGV 240

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           RALMSGLSS K KL  LDIGNNSISAKGAFHVAEY+K  KSL W+N+YMNDIGDEGAEKI
Sbjct: 241 RALMSGLSSTKAKLTHLDIGNNSISAKGAFHVAEYVKKSKSLFWLNMYMNDIGDEGAEKI 300

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           ADALKQNR+I  IDLGGNNIH+KG S IA+VLKDN+VIT+L++ YNP G DG K LSE+L
Sbjct: 301 ADALKQNRSIAIIDLGGNNIHAKGISEIAQVLKDNTVITTLEIGYNPFGPDGMKVLSEIL 360

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
           KFHGN+  LKLGWCQIGA G+E++AD L+YNNTISILDLR NGLRDE             
Sbjct: 361 KFHGNVKALKLGWCQIGAKGSEYIADTLKYNNTISILDLRGNGLRDE------------- 407

Query: 528 AIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
                              GA CLA+S KVVNE LT +DL FNEIRDDGAFAIAQALK+N
Sbjct: 408 -------------------GAVCLARSLKVVNEVLTELDLGFNEIRDDGAFAIAQALKSN 448

Query: 588 EDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           EDV +TSLNL NNFLTKFGQSALTDA+D VYEM+EKEVNI F
Sbjct: 449 EDVKITSLNLGNNFLTKFGQSALTDARDHVYEMNEKEVNIVF 490


>gi|343172597|gb|AEL99002.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/580 (65%), Positives = 454/580 (78%), Gaps = 38/580 (6%)

Query: 49  RLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKL 108
           RL+   V+AA+   G  R RR YR+SQ+ N L   PVK+ A+ V PAGVF++ +FVLWKL
Sbjct: 47  RLRYTSVRAASGSSG--RSRRAYRESQAQNPLPIGPVKEFATAVAPAGVFLALSFVLWKL 104

Query: 109 VEKLLMPKPSR----PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAF 164
           V K+L+PKP +     +KP+     WS   G+NL    + K+ R+SK  L++FA+ELR+F
Sbjct: 105 VGKVLLPKPQKFTTAENKPSTPATKWSFAPGSNLFKNLSQKIERDSKLKLDDFARELRSF 164

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
             VDMSGRNFGD+GL FLAESL YN+  EEV F+ANGITAAG+KAFDG+LQSN  LKTLN
Sbjct: 165 RIVDMSGRNFGDDGLIFLAESLAYNKAVEEVDFSANGITAAGLKAFDGILQSNFFLKTLN 224

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LSGNPIGDEG KCLC+ILV N G+++LQL+S  L DEGAKAIAELL+ NS L  +ELNNN
Sbjct: 225 LSGNPIGDEGAKCLCEILVSNTGLQKLQLNSTGLGDEGAKAIAELLRKNSNLTAIELNNN 284

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            IDYSGF S++ ALLENSTIR+LHLNGNYGGALG  ALAKGLEGNKS+ ELHLHGN++G+
Sbjct: 285 TIDYSGFASISGALLENSTIRALHLNGNYGGALGVAALAKGLEGNKSVSELHLHGNAMGN 344

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           EG+R+LM GLS+RKG++ +LDI NN I ++GAFH+AEY+K  KSLLW+N+YMNDIGDEGA
Sbjct: 345 EGVRSLMLGLSARKGRMTLLDISNNEIGSRGAFHIAEYVKKTKSLLWLNVYMNDIGDEGA 404

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           EKIADALKQNR+ITTIDLGGNNIH++G + IA +LKDN+VIT+L++AYNP G DGAKA+S
Sbjct: 405 EKIADALKQNRSITTIDLGGNNIHARGITCIAEILKDNNVITTLEIAYNPFGPDGAKAIS 464

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           EVLKFHGN+ TLKLGWCQIG  GAEF+ADM++YN TIS LDLRANGL D+          
Sbjct: 465 EVLKFHGNVKTLKLGWCQIGRQGAEFIADMIKYNTTISTLDLRANGLMDD---------- 514

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                 GA CLAQS KVVNEALTS+DL FNEIRD GAFAIAQAL
Sbjct: 515 ----------------------GAVCLAQSLKVVNEALTSVDLGFNEIRDTGAFAIAQAL 552

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKE 624
           KANEDVA+TS+NL++NF+TK GQSALTDA D V EM+ KE
Sbjct: 553 KANEDVALTSINLSSNFITKLGQSALTDASDHVMEMNGKE 592


>gi|5091543|gb|AAD39572.1|AC007067_12 T10O24.12 [Arabidopsis thaliana]
          Length = 681

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/726 (57%), Positives = 481/726 (66%), Gaps = 148/726 (20%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRCFRLKRLVVKAAARPE 62
           STS+++L+S PK+      +L+R F            P     R  RL    +KAA   +
Sbjct: 5   STSSLNLHSLPKV-----ILLNRLFVS----------PVVIHHRSPRLP--AIKAAYNSD 47

Query: 63  GGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATF------------------- 103
           GG ++ RVY++SQ+ +    A V+QIAS V+P G F   TF                   
Sbjct: 48  GGSKRSRVYKESQAASGFPNAKVQQIASSVLPLGSFAVVTFGTSIARRASFVYPSLLKTW 107

Query: 104 -VLWKLVEKLLMPKPSRPS----KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFA 158
            +LWK+V K + PK  + S      + +G+ WS+GAGTNLL GF  K+ RE+KQ LNEFA
Sbjct: 108 TILWKVVGKFMSPKSPKTSAGENNSSTQGVKWSIGAGTNLLQGFAAKVDREAKQRLNEFA 167

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KELR+F SVDMSG NFGDEGLFFLAESLGYNQT EEVSF+ANGITAAG+KAFDGVLQSNI
Sbjct: 168 KELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNI 227

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK LNLSGNPIGDEG K LC  L++N+ +E LQL+S D+ DEGAK IAELLK NS LR+
Sbjct: 228 MLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRI 287

Query: 279 LELNNNMIDYSG--FTSLAEALLENSTIRSLHLN-GNYGGALGANALAKGLEGNKSLREL 335
           +ELNNNMIDYS   F S    L    T +   LN GNYGGALGANALAKGLEGNKSLREL
Sbjct: 288 IELNNNMIDYSVSFFCSCVVQLYFRLTYQVYELNLGNYGGALGANALAKGLEGNKSLREL 347

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           HLHGNSIGDEG RALM+GLSS KGK+A+LD+GNNSISAKGAF+VAEYIK  KSL+W+NLY
Sbjct: 348 HLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLY 407

Query: 396 MNDIGDE---------------------------------------GAEKIADALKQNRT 416
           MNDIGDE                                       GAEKIAD+LKQNR+
Sbjct: 408 MNDIGDEVHIYPIYNNNLDCVCASLISENLVSFCSVVYLKDFQWFQGAEKIADSLKQNRS 467

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I TIDLGGNNIH++G +AIA+ LKDN++IT+L++ YNPIG DGAKALSE+LKFHGN+ TL
Sbjct: 468 IATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTL 527

Query: 477 KLGWC---------------------------------QIGASGAEFVADMLRYNNTISI 503
           KLGWC                                 QI A GAE VADMLRYNNTIS+
Sbjct: 528 KLGWCQVKPVHNSLSRNKSISSQLLISFCHGSFHFLFLQIAAKGAEHVADMLRYNNTISV 587

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
           LDLRANGLRDE                                GA CLA+S KVVNEALT
Sbjct: 588 LDLRANGLRDE--------------------------------GASCLARSLKVVNEALT 615

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEK 623
           S+DL FNEIRDDGAFAIAQALKANEDV VTS+NL NNF+TKFGQSALTDA+D V EM+EK
Sbjct: 616 SVDLGFNEIRDDGAFAIAQALKANEDVTVTSINLGNNFITKFGQSALTDARDHVLEMTEK 675

Query: 624 EVNIFF 629
           EV IFF
Sbjct: 676 EVEIFF 681


>gi|357118248|ref|XP_003560868.1| PREDICTED: protein NLRC3-like [Brachypodium distachyon]
          Length = 614

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/613 (56%), Positives = 447/613 (72%), Gaps = 48/613 (7%)

Query: 33  APLSFAL---PFSGTRRCFRLKRLV------VKAAARPEG---GRRQRRVYRQSQSDNAL 80
           +PLS  L   P    RR     R V      + +   P G   G  +R+ YR+ Q + A 
Sbjct: 34  SPLSRCLLPSPPPRARRWTMAPRAVSEVFDGIHSQHNPPGVGRGGARRKAYREVQGEPAA 93

Query: 81  TTAPV--KQIASFVVPAGVFVSATFVLWKLVEKLL--MPKPSRPSKPTAEGMNWSVGAGT 136
               V  + +  ++VPAG  ++ +FV+W++V   L    K    ++PT+ G+ WS  AG+
Sbjct: 94  PPLAVPARGVTGYIVPAGALLALSFVVWRVVLNFLPGKKKDRTSAEPTSSGIMWSFAAGS 153

Query: 137 NLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
           NL +  + K  +ESK+ LN F KELR   +V+M+GR FGDEGLFFLAESL YN++AEEV 
Sbjct: 154 NLSTSTSFKAEKESKKNLNRFYKELRTLKNVNMAGRQFGDEGLFFLAESLAYNKSAEEVD 213

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
           F+ N ITA GI+AFDG+LQ N ALKTLNLSGN IGDEG KCL  ILV+N G+++L L+S 
Sbjct: 214 FSGNAITAVGIEAFDGILQINTALKTLNLSGNAIGDEGAKCLSGILVENVGIQKLLLNST 273

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
           ++ DEGAKAI+++LK N  +R+++L+NN+I+YSGF S+AEALLEN+ +RSL+LNGNYGG 
Sbjct: 274 NIGDEGAKAISDMLKKNKTIRIVQLSNNVIEYSGFASIAEALLENNALRSLYLNGNYGGP 333

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           LGA++LAKG+ GNKSLRELHLHGN   +EG+R LMS LSS KGK+ VLDIGNN+I+++G+
Sbjct: 334 LGASSLAKGVVGNKSLRELHLHGNGFVNEGLRVLMSALSSHKGKITVLDIGNNNITSEGS 393

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            +VA++IK  KSL W++LYMND+GDEGAEK+ADALKQN+TI+T+D GGNNIHS+G +AIA
Sbjct: 394 LYVADFIKRTKSLRWLSLYMNDVGDEGAEKVADALKQNQTISTMDFGGNNIHSRGVTAIA 453

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             LK+N+V+T+L+L+YNPIG +G KAL +VLKF G + TLKLGWCQIG SGAEF+AD L+
Sbjct: 454 ETLKENAVLTTLELSYNPIGPEGVKALCDVLKFDGKLQTLKLGWCQIGVSGAEFIADCLK 513

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
            N T+S LDLRANGL D+                                GA CLA+S K
Sbjct: 514 CNTTLSTLDLRANGLGDD--------------------------------GAICLARSLK 541

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            +NE+L S+DL FNEIRDDGAFA+AQALKANED+A+TSLNLANNF  KFGQ ALT+A+D 
Sbjct: 542 TINESLKSLDLGFNEIRDDGAFALAQALKANEDLAITSLNLANNFFGKFGQVALTEARDH 601

Query: 617 VYEMSEKEVNIFF 629
           VYEMSEKE++I+F
Sbjct: 602 VYEMSEKEIDIYF 614


>gi|242095286|ref|XP_002438133.1| hypothetical protein SORBIDRAFT_10g008560 [Sorghum bicolor]
 gi|241916356|gb|EER89500.1| hypothetical protein SORBIDRAFT_10g008560 [Sorghum bicolor]
          Length = 614

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/579 (59%), Positives = 432/579 (74%), Gaps = 44/579 (7%)

Query: 60  RPEGGRR---QRRVYRQSQSDNALTTAPV--KQIASFVVPAGVFVSATFVLWKLVEKLLM 114
           RP G  R    RR YR++Q + A+       +++A + VP G  +  +FV+WK+V+ ++ 
Sbjct: 71  RPPGTGRGGAPRRSYREAQGEAAVPPLAAAARKVAPYAVPVGAVLMLSFVIWKVVQNMIP 130

Query: 115 PKP----SRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
            K     S  S P+  G+ WS  AG+NL S  T    +ES++ LN+F KE+R   +V+M+
Sbjct: 131 GKKKDQNSGESAPS--GIMWSFAAGSNL-STPTLSAEKESRKNLNKFYKEIRTSKTVNMA 187

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
           GR FGDEGLFFLAESL YN++AEEV F+ NGITA GI+AFDG+LQ N  LKTLNLSGN I
Sbjct: 188 GRQFGDEGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTTLKTLNLSGNDI 247

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GDEG KCL DILV+N G+++L L+S+++ DEGAKAI+ +LK N  +R L+L+NN IDYSG
Sbjct: 248 GDEGAKCLSDILVENFGIQKLLLNSINIGDEGAKAISNMLKKNKSIRFLQLSNNTIDYSG 307

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F S+AE LLEN+ IRSL+LNGNYGG LGA++LA+G+ GNKSLRE+HLHGN IG+EGIR L
Sbjct: 308 FASIAEGLLENNLIRSLYLNGNYGGPLGASSLAQGILGNKSLREIHLHGNGIGNEGIREL 367

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           MS LS+ KGK+ ++DIGNN+IS +G   VA ++K  KSL W +L MNDI DEGAEK+A+A
Sbjct: 368 MSALSAHKGKITIVDIGNNNISPEGLRPVASFLKRTKSLQWFSLCMNDISDEGAEKVAEA 427

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK N+TI+TIDLGGNNIHSKG S IA  LKDN+V+T+LDL+YNPIG+DG KAL +VLKFH
Sbjct: 428 LKDNKTISTIDLGGNNIHSKGVSVIAETLKDNAVLTTLDLSYNPIGSDGVKALCDVLKFH 487

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY 530
           G I TLKLGWCQIG  GAE +AD L+YN T+S LDLRANGL D+                
Sbjct: 488 GKIQTLKLGWCQIGVEGAECIADCLKYNTTLSTLDLRANGLGDD---------------- 531

Query: 531 SLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
                           GA CLA+SFK++NE+LTS+DL FNEIRDDGAFA+AQALKANED+
Sbjct: 532 ----------------GAICLARSFKIINESLTSLDLGFNEIRDDGAFALAQALKANEDL 575

Query: 591 AVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           AVTSLNLANNF TKFGQ AL++A+D V+EM EKE++I+F
Sbjct: 576 AVTSLNLANNFFTKFGQVALSEARDHVFEMHEKEIDIYF 614


>gi|413952546|gb|AFW85195.1| hypothetical protein ZEAMMB73_319583 [Zea mays]
          Length = 615

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/603 (57%), Positives = 438/603 (72%), Gaps = 51/603 (8%)

Query: 45  RRCFRLKRLVVKAAA-----------RPEG---GRRQRRVYRQSQSDNALTTAPVKQIAS 90
           R   RL R V +A++           RP G   G  +RR YR++Q + A+        A 
Sbjct: 46  RGSRRLGRAVPRASSEAFGDGFRSQDRPPGVSSGGVRRRTYREAQGEAAVPPVAAAARAV 105

Query: 91  FVV--PAGVFVSATFVLWKLVEKLL--MPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKL 146
                P G  +  +FV+WK+V+ ++    K     K    G+ WS  AG+NL +  T   
Sbjct: 106 APYVAPVGAVLMLSFVIWKVVQNMIPGKKKDHGSGKHAPSGIMWSFAAGSNLATS-TLSA 164

Query: 147 FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            +ES++ LN+F KELR   +V+M+GR FGDEGLFFLAESL Y+++AEEV F+ NGITA G
Sbjct: 165 EKESRKNLNKFYKELRTLKTVNMAGRQFGDEGLFFLAESLAYDKSAEEVDFSGNGITAVG 224

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           I+AFDGVLQ N  LKTLNLSGN IGDEG KCL DILV+N G+++L L+S+++ DEGAKA+
Sbjct: 225 IEAFDGVLQINTTLKTLNLSGNDIGDEGAKCLSDILVENVGIQKLLLNSINIGDEGAKAL 284

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           + +LK N  +R+L+ +NN I+YSGF S+AEALLEN+TIRSL+LNGNYGG LGA +LA+G+
Sbjct: 285 SNMLKKNKSIRILQFSNNAIEYSGFASIAEALLENNTIRSLYLNGNYGGPLGACSLAQGI 344

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
            GNKSLRE+HLHGN IG+EGIR LMS LS+ KGK+ V+DIGNN+IS +G   VAE++K  
Sbjct: 345 LGNKSLREIHLHGNGIGNEGIRELMSALSAHKGKITVVDIGNNNISPEGLHPVAEFLKRT 404

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           KSL W +LYMNDI DEGAEK+A+ALK N+TI+TIDLGGNNIHSK  SA+A  LKDN+V+T
Sbjct: 405 KSLQWFSLYMNDISDEGAEKVAEALKDNKTISTIDLGGNNIHSKAVSAVAETLKDNAVLT 464

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +LDL+YNPIG+DG KAL +VLKFHG I TLKLGWCQIG  GAE +AD L+YN T+S LDL
Sbjct: 465 TLDLSYNPIGSDGVKALCDVLKFHGKIQTLKLGWCQIGMEGAECIADCLKYNTTLSTLDL 524

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSID 566
           RANGL ++                                GA CLA+SFK++NE+LTS+D
Sbjct: 525 RANGLGND--------------------------------GAICLARSFKIINESLTSLD 552

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVN 626
           L FNEIRDDGAFA+AQALKANED+AVTSLNLANNF TKFGQ AL++A+D VYEM+E+E++
Sbjct: 553 LGFNEIRDDGAFALAQALKANEDLAVTSLNLANNFFTKFGQVALSEARDHVYEMTEREID 612

Query: 627 IFF 629
           I+F
Sbjct: 613 IYF 615


>gi|147788465|emb|CAN61184.1| hypothetical protein VITISV_031253 [Vitis vinifera]
          Length = 629

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/641 (57%), Positives = 425/641 (66%), Gaps = 134/641 (20%)

Query: 3   STSTISLYSHP-------------------KLSHRAQPVLSRS---------FCQARDAP 34
           STS I LYSHP                   ++SHRA+P   RS         +C     P
Sbjct: 5   STSAICLYSHPMVLSSSSSQSPNLTFYSDSQISHRARPRNLRSQVLGSSWWGYCAL--LP 62

Query: 35  LSFALPFSGTRRCFRLKRLVVKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIAS 90
            S    +  + R +R + LV  AA+  +G  R+    RRV++QSQ    L+  PV++IAS
Sbjct: 63  TSV---YVSSIRHYRFRTLVTVAASTADGVPRRPVSGRRVFKQSQGQGPLSPVPVREIAS 119

Query: 91  FVVPAGVFVSATFVLWKLVEKLLMPKPSRPSKPTA----EGMNWSVGAGTNLLSGFTGKL 146
           FVVPA +F + TFVLW+LVEK+L+PK SR S         G+ WS   GTNLL+G T K 
Sbjct: 120 FVVPASLFFAVTFVLWRLVEKILLPKSSRSSSLEKKSSSPGVKWSFAPGTNLLAGLTAKF 179

Query: 147 FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            RESKQ LNEFAKE+R+F SVDMS                                  AG
Sbjct: 180 DRESKQKLNEFAKEIRSFGSVDMS----------------------------------AG 205

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           +KAFDGVLQSNI LKTL+LSGNPIGDEG KCLCDIL+DNAG+++LQL+S DL DEGAKAI
Sbjct: 206 LKAFDGVLQSNIVLKTLDLSGNPIGDEGAKCLCDILIDNAGIQKLQLNSADLGDEGAKAI 265

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE+LK NS LR++ELNNNMIDYSGFTSL  ALLEN+TIR++HLNGNYGGALG  ALAKGL
Sbjct: 266 AEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGALGVAALAKGL 325

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           E NKSLRELHLHGNSIGDEG+R LMSGLSS KGKL +LDIGNN IS++GAFHVAE  K  
Sbjct: 326 EANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVAEXXKKA 385

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           KSLLW+NLYMNDIGDEGAEKIADALK+NR+I TIDLGGNNIH+KG S IA VLKDN+VIT
Sbjct: 386 KSLLWLNLYMNDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIAGVLKDNTVIT 445

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +L+L YNPIG +GAKALSEVLKFHG I TLKLGWCQIGA GAEF+AD L+YN TIS LDL
Sbjct: 446 TLELGYNPIGPEGAKALSEVLKFHGKIKTLKLGWCQIGAKGAEFIADTLKYNTTISTLDL 505

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSID 566
           RANGLRDE                               +GA  +AQ             
Sbjct: 506 RANGLRDED------------------------------EGAFAIAQ------------- 522

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
                           ALKANEDVAVTSLNLA+NFLTKFGQ
Sbjct: 523 ----------------ALKANEDVAVTSLNLASNFLTKFGQ 547


>gi|222635277|gb|EEE65409.1| hypothetical protein OsJ_20746 [Oryza sativa Japonica Group]
          Length = 873

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/517 (62%), Positives = 406/517 (78%), Gaps = 34/517 (6%)

Query: 101 ATFVLWKLVEKLLMPKPSRPS--KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFA 158
           A  V+W++V+ LL  K    S  + T  G+ WS  AG+NL +  +    +ES++ LN+F 
Sbjct: 105 ARTVIWRVVQNLLPGKTKDQSSGESTPSGIMWSFAAGSNLSTSASFNAEKESRKNLNKFY 164

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KE+R   +V+M+GR FGDEGLFFLAESL YN++AEEV F+ NGITA GI+AFDG+LQ N 
Sbjct: 165 KEIRTLKNVNMAGRQFGDEGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINT 224

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           ALK+LNLSGN IGDEG KCL DILV+N G+++L L+S ++ DEGAKAI+++LK N  +R 
Sbjct: 225 ALKSLNLSGNAIGDEGAKCLSDILVENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRT 284

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+NN I+YSGF S+AEALLEN+ +RSL +NGNYGG LGA++LAKG+ GNK+LRELHLH
Sbjct: 285 LQLSNNTIEYSGFASIAEALLENNVLRSLFVNGNYGGPLGASSLAKGILGNKTLRELHLH 344

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN  G+EG+RALMS LS+ KGK+ VLDIGNN+I+++G+ HVAE+IK  KSLLW++LYMND
Sbjct: 345 GNGFGNEGVRALMSALSAHKGKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMND 404

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEGAEK+ADALKQN+TI+T+DLGGNNIHSKG SAIA  LKDNSV+T+L+L+YNPIG +
Sbjct: 405 ISDEGAEKVADALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPE 464

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           G KAL +VLKF+G I TLKLGWCQIG SGAEFVAD L+YN T+S LDLRANGL D+    
Sbjct: 465 GVKALCDVLKFNGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDD---- 520

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                       GA CLA+SFK++NE+LTS+DL FNEIRDDGAF
Sbjct: 521 ----------------------------GAICLARSFKIINESLTSLDLGFNEIRDDGAF 552

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
           A+AQALKANED+AVTSLNLANNF TKFGQ AL++A+D
Sbjct: 553 ALAQALKANEDLAVTSLNLANNFFTKFGQVALSEARD 589


>gi|51535809|dbj|BAD37894.1| deliriumA-like [Oryza sativa Japonica Group]
          Length = 628

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/558 (58%), Positives = 417/558 (74%), Gaps = 49/558 (8%)

Query: 67  QRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPSRPS--KPT 124
           + RV +      A   A V+ ++ +VVPA   ++ +FV+W++V+ LL  K    S  + T
Sbjct: 82  EYRVEQGEAPPAAAAAAAVRGVSPYVVPAAAVLALSFVIWRVVQNLLPGKTKDQSSGEST 141

Query: 125 AEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAE 184
             G+ WS  AG+NL +  +    +ES++ LN+F KE+R   +V+M+GR FGDEGLFFLAE
Sbjct: 142 PSGIMWSFAAGSNLSTSASFNAEKESRKNLNKFYKEIRTLKNVNMAGRQFGDEGLFFLAE 201

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           SL YN++AEEV F+ NGITA GI+AFDG+LQ N ALK+LNLSGN IGDEG KCL DILV+
Sbjct: 202 SLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDILVE 261

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N G+++L L+S ++ DEGAKAI+++LK N  +R L+L+NN I+YSGF S+AEALLEN+ +
Sbjct: 262 NVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAEALLENNVL 321

Query: 305 RSLHL---------------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           RSL +               +GNYGG LGA++LAKG+ GNK+LRELHLHGN  G+EG+RA
Sbjct: 322 RSLFVKLVAHNPVALYVIYDDGNYGGPLGASSLAKGILGNKTLRELHLHGNGFGNEGVRA 381

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           LMS LS+ KGK+ VLDIGNN+I+++G+ HVAE+IK  KSLLW++LYMNDI DEGAEK+AD
Sbjct: 382 LMSALSAHKGKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMNDISDEGAEKVAD 441

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           ALKQN+TI+T+DLGGNNIHSKG SAIA  LKDNSV+T+L+L+YNPIG +G KAL +VLKF
Sbjct: 442 ALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKALCDVLKF 501

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI 529
           +G I TLKLGWCQIG SGAEFVAD L+YN T+S LDLRANGL D+               
Sbjct: 502 NGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDD--------------- 546

Query: 530 YSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 589
                            GA CLA+SFK++NE+LTS+DL FNEIRDDGAFA+AQALKANED
Sbjct: 547 -----------------GAICLARSFKIINESLTSLDLGFNEIRDDGAFALAQALKANED 589

Query: 590 VAVTSLNLANNFLTKFGQ 607
           +AVTSLNLANNF TKFGQ
Sbjct: 590 LAVTSLNLANNFFTKFGQ 607


>gi|218197870|gb|EEC80297.1| hypothetical protein OsI_22316 [Oryza sativa Indica Group]
          Length = 618

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 309/566 (54%), Positives = 400/566 (70%), Gaps = 72/566 (12%)

Query: 86  KQIASFVVPAGVFVSATF--------------------VLWKLVEKLLMPKPSRPS--KP 123
           + +A +VVPA   ++ +F                    V+W++V+ LL  K    S  + 
Sbjct: 103 RGVAPYVVPAAAVLALSFEHVIFSAVCGINTNSLFQRTVIWRVVQNLLPGKTKDQSSGES 162

Query: 124 TAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLA 183
           T  G+ WS  AG+NL +  +    +ES++ LN+F KE+R   +V+M+GR FGDEGLFFLA
Sbjct: 163 TPSGIMWSFAAGSNLSTSTSFNAEKESRKNLNKFYKEIRTLKNVNMAGRQFGDEGLFFLA 222

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           ESL YN++AEEV F+ NGITA GI+AFDG+LQ N ALK+LNLSGN IGDEG KCL DILV
Sbjct: 223 ESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDILV 282

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           +N G+++L L+S ++ DEGAKAI+++LK N  +R L+L+NN I+YSGF S+AEALLEN+ 
Sbjct: 283 ENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAEALLENNV 342

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +RSL +       +  N +A  +  ++   E+ L     G + I           GK+ V
Sbjct: 343 LRSLFVK-----LVAHNPVALYVIYDECAYEVVLR--YCGSDYI-----------GKITV 384

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LDIGNN+I+++G+ HVAE+IK  KSLLW++LYMNDI DEGAEK+ADALKQN+TI+T+D+G
Sbjct: 385 LDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMNDISDEGAEKVADALKQNKTISTVDVG 444

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GNNIHSKG SAIA  LKDNSV+T+L+L+YNPIG +G KAL +VLKF+G I TLKLGWCQI
Sbjct: 445 GNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKALCDVLKFNGKIQTLKLGWCQI 504

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G SGAEFVAD L+YN T+S LDLRANGL D+                             
Sbjct: 505 GVSGAEFVADCLKYNTTLSTLDLRANGLGDD----------------------------- 535

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
              GA CLA+SFK++NE+LTS+DL FNEIRDDGAFA+AQALKANED+AVTSLNLANNF T
Sbjct: 536 ---GAICLARSFKIINESLTSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLANNFFT 592

Query: 604 KFGQSALTDAKDLVYEMSEKEVNIFF 629
           KFGQ AL++A++ VYEMSEKE++IFF
Sbjct: 593 KFGQVALSEAREHVYEMSEKEIDIFF 618


>gi|168024089|ref|XP_001764569.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684147|gb|EDQ70551.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 293/487 (60%), Positives = 358/487 (73%), Gaps = 34/487 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K  RES   LNEF++ELR F  VD++G+ FGDEG  +LAE L +NQ+AE V F+ANGITA
Sbjct: 17  KFRRESMAKLNEFSRELRTFREVDLAGKGFGDEGFVYLAEGLAFNQSAESVDFSANGITA 76

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            GIKA   VL +N  LKTLNLSGN IGDEG   L  +L  N G+ +LQL+S++L DEGAK
Sbjct: 77  TGIKALSQVLPANTFLKTLNLSGNSIGDEGAAELAGLLEKNQGITKLQLNSINLGDEGAK 136

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE+LK N  +  LELNNN++D++GF ++A+AL  N T+RS+ +N NYGGALG +A AK
Sbjct: 137 AIAEMLKKNEHITTLELNNNVVDFAGFAAIADALTTNKTLRSIQINNNYGGALGGSAFAK 196

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK-GKLAVLDIGNNSISAKGAFHVAEYI 383
           GL+ NKSLRELHLHGN +G+EGIR LM GL + K GK++ LDIGNN I  KGAFHVAEYI
Sbjct: 197 GLQENKSLRELHLHGNDMGNEGIRELMVGLMAHKAGKISNLDIGNNKIGPKGAFHVAEYI 256

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K  KSL W+NLYMND GD+GAE+IA+ALK+NR+I TIDLGGNNI ++G + +A  LKDNS
Sbjct: 257 KKAKSLQWLNLYMNDFGDQGAERIAEALKRNRSIVTIDLGGNNISAEGTAHLAAALKDNS 316

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            IT+ + +YNPIG +GAK L++ LKFHG I TL+LGWCQIG  GAE +AD L YN TIS 
Sbjct: 317 TITTFEFSYNPIGMNGAKVLADTLKFHGKIETLRLGWCQIGVKGAEAIADCLLYNATIST 376

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
           LDLRAN L D+                                GA  LA+S KVVNE LT
Sbjct: 377 LDLRANSLGDD--------------------------------GAALLAKSLKVVNEHLT 404

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE- 622
           S+DL FNEIRD GAFA+AQALKAN D AV++LNL +NFLTK+GQ ALT+AKD V EM++ 
Sbjct: 405 SLDLGFNEIRDAGAFALAQALKANGDAAVSTLNLTSNFLTKYGQVALTEAKDHVSEMNDG 464

Query: 623 KEVNIFF 629
           KEVNI+F
Sbjct: 465 KEVNIYF 471


>gi|357486131|ref|XP_003613353.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
 gi|355514688|gb|AES96311.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
          Length = 355

 Score =  567 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 279/385 (72%), Positives = 326/385 (84%), Gaps = 32/385 (8%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N+ +E+LQL+S DL DEGAKAIAE+LK NS LRVLELNNNMI+YSGFTSLA ALLEN++I
Sbjct: 3   NSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSI 62

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R++HLNGNYGGALG NALAK LEGNKS+RELHLHGNSIGDEGIR+LM+GL+S KGKL +L
Sbjct: 63  RNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLL 122

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           DIGNNS++AKGAF+VA YIK  KSLLW+N+YMNDIGDEGAEK+ADALK+NR+ITT+D+GG
Sbjct: 123 DIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSITTLDMGG 182

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           NNIH+ G  A+A+VLKDNSVIT+L+L+YNPIG DGAKAL+EV+KFHGN+ TLKLGWCQIG
Sbjct: 183 NNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEVIKFHGNVKTLKLGWCQIG 242

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
           A GAEF+AD L+YN TIS+LDLRANGLRDE                              
Sbjct: 243 AKGAEFIADALKYNTTISVLDLRANGLRDE------------------------------ 272

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
             GA CLA+S KVVNEALTS+DL FNEIRDDGAFAIAQALK+NEDVAVTSLN+ +NFLTK
Sbjct: 273 --GALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNEDVAVTSLNIGSNFLTK 330

Query: 605 FGQSALTDAKDLVYEMSEKEVNIFF 629
           FGQSAL+DA+D V+EM+EKE+ IFF
Sbjct: 331 FGQSALSDARDHVFEMTEKEIAIFF 355



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 3/304 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + ++  + GDEG   +AE L  N +   +    N I  +G  +  G L  N +++ ++L+
Sbjct: 9   LQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLN 68

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNM 285
           GN  G  GV  L   L  N  +  L L    + DEG +++   L  +   L +L++ NN 
Sbjct: 69  GNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDIGNNS 128

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +   G   +A  + +  ++  L++  N  G  GA  LA  L+ N+S+  L + GN+I   
Sbjct: 129 LTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSITTLDMGGNNIHAV 188

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+ A+   L      +  L++  N I   GA  +AE IK   ++  + L    IG +GAE
Sbjct: 189 GVGAVAKVLKDNS-VITTLELSYNPIGPDGAKALAEVIKFHGNVKTLKLGWCQIGAKGAE 247

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALS 464
            IADALK N TI+ +DL  N +  +GA  +AR LK  N  +TSLDL +N I  DGA A++
Sbjct: 248 FIADALKYNTTISVLDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIA 307

Query: 465 EVLK 468
           + LK
Sbjct: 308 QALK 311



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 163/321 (50%), Gaps = 5/321 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K+  +   ++++       G   LA +L  N +   +    N   A G+ 
Sbjct: 19  EGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGALGVN 78

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIA 267
           A    L+ N +++ L+L GN IGDEG++ L   L  + G +  L + +  L  +GA  +A
Sbjct: 79  ALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDIGNNSLTAKGAFYVA 138

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             +K    L  L +  N I   G   LA+AL EN +I +L + GN   A+G  A+AK L+
Sbjct: 139 GYIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSITTLDMGGNNIHAVGVGAVAKVLK 198

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N  +  L L  N IG +G +AL   +    G +  L +G   I AKGA  +A+ +K   
Sbjct: 199 DNSVITTLELSYNPIGPDGAKALAEVIKFH-GNVKTLKLGWCQIGAKGAEFIADALKYNT 257

Query: 388 SLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNS--V 444
           ++  ++L  N + DEGA  +A +LK  N  +T++DLG N I   GA AIA+ LK N    
Sbjct: 258 TISVLDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNEDVA 317

Query: 445 ITSLDLAYNPIGADGAKALSE 465
           +TSL++  N +   G  ALS+
Sbjct: 318 VTSLNIGSNFLTKFGQSALSD 338


>gi|302773037|ref|XP_002969936.1| hypothetical protein SELMODRAFT_93050 [Selaginella moellendorffii]
 gi|300162447|gb|EFJ29060.1| hypothetical protein SELMODRAFT_93050 [Selaginella moellendorffii]
          Length = 475

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/488 (59%), Positives = 355/488 (72%), Gaps = 33/488 (6%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           T K  +ES   + EF+KEL+ F   DMSGR FGDEG+  L+ SLGYN++ E   F+AN I
Sbjct: 20  TQKYIQESMSRIREFSKELQTFPEADMSGRKFGDEGIKILSSSLGYNKSLEYADFSANNI 79

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           TA G       L++N  LKTLN+SGNPIGD+G   LCD L  N  +E+LQL+S ++ DEG
Sbjct: 80  TAVGSSEMRKYLRANSHLKTLNMSGNPIGDDGAGVLCDFLFTNGTLEKLQLNSCNISDEG 139

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           AK +A  LK+N  L VLELNNN IDY GF ++AEAL+ N TIR +HLNGNYGGALGA AL
Sbjct: 140 AKLLANALKSNQTLVVLELNNNTIDYPGFAAIAEALIVNKTIRGVHLNGNYGGALGALAL 199

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           AKGLE NK LRE+HLHGN +G+EGIR LM GL+S K KL+ LDIGNNSI  KG ++VAEY
Sbjct: 200 AKGLEQNKILREIHLHGNGMGNEGIRTLMEGLASSKAKLSSLDIGNNSIGPKGVYYVAEY 259

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K  KS+ W+NLYMNDIGDEGAEKIA+ALK+N+TI+TID+GGNNI + GA+ IA  LKDN
Sbjct: 260 MKKSKSIQWLNLYMNDIGDEGAEKIAEALKRNKTISTIDIGGNNITAAGATHIANALKDN 319

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S ITSL+++YNPIG DGAK L++ LK +GN+ TL+LGWCQIG  GA   A+ L+YN+T+S
Sbjct: 320 STITSLEMSYNPIGGDGAKILADTLKHNGNVQTLRLGWCQIGVKGAAAFAECLQYNSTMS 379

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            LDLRANGL DE                                GA  LA+S KVVNE L
Sbjct: 380 TLDLRANGLGDE--------------------------------GAAILARSLKVVNETL 407

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 622
           TS+DL FNEIRD+GAFA+AQALK N D AVT+LNL NNF TK+G+ ALT+AK+ V E+ +
Sbjct: 408 TSLDLGFNEIRDNGAFALAQALKNNVDAAVTTLNLMNNFFTKYGKVALTEAKEHVCEVQD 467

Query: 623 -KEVNIFF 629
            KE+NIFF
Sbjct: 468 GKEINIFF 475


>gi|302799292|ref|XP_002981405.1| hypothetical protein SELMODRAFT_154424 [Selaginella moellendorffii]
 gi|300150945|gb|EFJ17593.1| hypothetical protein SELMODRAFT_154424 [Selaginella moellendorffii]
          Length = 448

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 287/477 (60%), Positives = 350/477 (73%), Gaps = 33/477 (6%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           + EF+KEL+ F   DMSGR FGDEG+  L+ SLGYN++ E   F+AN ITA G       
Sbjct: 4   IREFSKELQTFPEADMSGRKFGDEGIKILSSSLGYNKSLEYADFSANNITAVGSSEMRKY 63

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  LKTLN+SGNPIGD+G   LCD L  N  +E+LQL+S ++ DEGAK +A  LK+N
Sbjct: 64  LRANSHLKTLNMSGNPIGDDGAGVLCDFLFTNGTLEKLQLNSCNISDEGAKLLANALKSN 123

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L VLELNNN IDY GF ++AEAL+ N TIR +HLNGNYGGALGA ALAKGLE NK LR
Sbjct: 124 QTLVVLELNNNTIDYPGFAAIAEALIVNKTIRGVHLNGNYGGALGALALAKGLEQNKILR 183

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+HLHGN +G+EGIR LM GL+S K KL+ LDIGNNSI  KG ++VAEY+K  KS+ W+N
Sbjct: 184 EIHLHGNGMGNEGIRTLMEGLASSKAKLSSLDIGNNSIGPKGVYYVAEYMKKSKSIQWLN 243

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LYMNDIGDEGAEKIA+ALK+N+TI+TID+GGNNI + GA+ IA  LKDNS ITSL+++YN
Sbjct: 244 LYMNDIGDEGAEKIAEALKRNKTISTIDIGGNNITAAGATHIANALKDNSTITSLEMSYN 303

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           PIG DGAK L+E LK +GN+ TL+LGWCQIG  GA   A+ L+YN+T+S LDLRANGL D
Sbjct: 304 PIGGDGAKILAETLKHNGNVQTLRLGWCQIGVKGAAAFAECLQYNSTMSTLDLRANGLGD 363

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           E                                GA  LA+S KVVNE LTS+DL FNEIR
Sbjct: 364 E--------------------------------GAAILARSLKVVNETLTSLDLGFNEIR 391

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE-KEVNIFF 629
           D+GAFA+AQALK N D AVT+LNL NNF TK+G+ ALT+AK+ V E+ + KE+NIFF
Sbjct: 392 DNGAFALAQALKNNVDAAVTTLNLMNNFFTKYGKVALTEAKEHVCEVQDGKEINIFF 448



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 29/182 (15%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K  +  S++D+ G N                            ITAAG  
Sbjct: 252 EGAEKIAEALKRNKTISTIDIGGNN----------------------------ITAAGAT 283

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+ N  + +L +S NPIG +G K L + L  N  V+ L+L    +  +GA A AE
Sbjct: 284 HIANALKDNSTITSLEMSYNPIGGDGAKILAETLKHNGNVQTLRLGWCQIGVKGAAAFAE 343

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLE 327
            L+ NS +  L+L  N +   G   LA +L + N T+ SL L  N     GA ALA+ L+
Sbjct: 344 CLQYNSTMSTLDLRANGLGDEGAAILARSLKVVNETLTSLDLGFNEIRDNGAFALAQALK 403

Query: 328 GN 329
            N
Sbjct: 404 NN 405


>gi|449486586|ref|XP_004157340.1| PREDICTED: protein NLRC3-like [Cucumis sativus]
          Length = 420

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/300 (68%), Positives = 237/300 (79%), Gaps = 32/300 (10%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K   ELHL+GNSIGDEG+R L+SGLSSRKGKLA+LDIGNNSI+AKGAFHVAE++K  KSL
Sbjct: 153 KEFLELHLNGNSIGDEGVRTLISGLSSRKGKLALLDIGNNSITAKGAFHVAEFVKRTKSL 212

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + +NLYMNDIGDEGAEKIAD+LKQNRTI T+DLGGNNIH +G S +A+ LKDN  IT+L+
Sbjct: 213 VLLNLYMNDIGDEGAEKIADSLKQNRTIKTLDLGGNNIHGEGISKVAQALKDNDTITTLE 272

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++YNPIG +GA+ALSEVLKFHGN+  LKLGWC+IG  GAEF+A+ L+YN TIS+LDLR N
Sbjct: 273 ISYNPIGPEGAEALSEVLKFHGNVKNLKLGWCKIGPKGAEFIAETLKYNTTISVLDLRGN 332

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF 569
           GLRDE                                GA CLA+S KVVNEALTS+DL F
Sbjct: 333 GLRDE--------------------------------GATCLARSLKVVNEALTSLDLGF 360

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           NEIRD GAFAIAQALKAN D+AVTSLNLANNFLTKFGQSALTDA+D V+EM E+EV I +
Sbjct: 361 NEIRDPGAFAIAQALKANGDIAVTSLNLANNFLTKFGQSALTDARDHVHEMCEREVCISY 420



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 1/226 (0%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNI 218
           E + F  + ++G + GDEG+  L   L   +     +    N ITA G       ++   
Sbjct: 151 ETKEFLELHLNGNSIGDEGVRTLISGLSSRKGKLALLDIGNNSITAKGAFHVAEFVKRTK 210

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  LNL  N IGDEG + + D L  N  ++ L L   ++  EG   +A+ LK+N  +  
Sbjct: 211 SLVLLNLYMNDIGDEGAEKIADSLKQNRTIKTLDLGGNNIHGEGISKVAQALKDNDTITT 270

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           LE++ N I   G  +L+E L  +  +++L L     G  GA  +A+ L+ N ++  L L 
Sbjct: 271 LEISYNPIGPEGAEALSEVLKFHGNVKNLKLGWCKIGPKGAEFIAETLKYNTTISVLDLR 330

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GN + DEG   L   L      L  LD+G N I   GAF +A+ +K
Sbjct: 331 GNGLRDEGATCLARSLKVVNEALTSLDLGFNEIRDPGAFAIAQALK 376



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 1/175 (0%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           EF K  ++   +++   + GDEG   +A+SL  N+T + +    N I   GI      L+
Sbjct: 204 EFVKRTKSLVLLNLYMNDIGDEGAEKIADSLKQNRTIKTLDLGGNNIHGEGISKVAQALK 263

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  + TL +S NPIG EG + L ++L  +  V+ L+L    +  +GA+ IAE LK N+ 
Sbjct: 264 DNDTITTLEISYNPIGPEGAEALSEVLKFHGNVKNLKLGWCKIGPKGAEFIAETLKYNTT 323

Query: 276 LRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           + VL+L  N +   G T LA +L + N  + SL L  N     GA A+A+ L+ N
Sbjct: 324 ISVLDLRGNGLRDEGATCLARSLKVVNEALTSLDLGFNEIRDPGAFAIAQALKAN 378


>gi|303273528|ref|XP_003056125.1| leucine rich repeat-containing protein [Micromonas pusilla
           CCMP1545]
 gi|226462209|gb|EEH59501.1| leucine rich repeat-containing protein [Micromonas pusilla
           CCMP1545]
          Length = 705

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/482 (45%), Positives = 307/482 (63%), Gaps = 33/482 (6%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E K+ L +   +LR +S+VD+ GRN G+EG  +++E+L +N  A  V F+ANGI   G+ 
Sbjct: 256 EFKRVLRDMMGDLRRYSTVDLHGRNLGNEGAAYVSEALAFNDNATCVDFSANGIGDVGVV 315

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+SN AL+ L+L+ N +GD     L + L  +  +  L L+S  + D+GA A+A+
Sbjct: 316 AICEALKSNHALEMLSLASNNLGDSATIQLAEYLKIDKTITTLNLNSSGIGDKGAAALAD 375

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +LK N+ L  LELNNN IDY G  SLAEAL+ENST+ +L L+GNY G +GA+ALA GL+ 
Sbjct: 376 MLKVNTTLSALELNNNSIDYEGTCSLAEALVENSTLETLSLSGNYVGRMGASALANGLKM 435

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N  ++ L L+GN IG+ GI+ L   LS R  KL  LD+GNN I  +     A+YIK    
Sbjct: 436 NSGIKGLFLNGNDIGNLGIQPLCRALSERDAKLTDLDVGNNGIGFEAGKFFADYIKQDSD 495

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  +NLYMN++ D GA +IA+AL  N  I  +D+GGNNI   GA A+A  LK N  + +L
Sbjct: 496 LTHLNLYMNELCDLGATEIANALSDNCAIEVLDIGGNNILDAGAMALAEALKVNKTLRTL 555

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           +L YNPIGA GA+A++E +KFH  + TL++GWC+I   GA ++AD ++YN  I  LDLR 
Sbjct: 556 ELGYNPIGARGAQAMAESVKFHSKVTTLRMGWCKITKDGAWYLADAIKYNEHICTLDLRG 615

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
           N L DE C+                                 LAQS +VVNE L S+DL 
Sbjct: 616 NELGDEGCT--------------------------------ALAQSLQVVNENLISLDLG 643

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE-KEVNI 627
           +NEI+D+GAFA+AQA+K+N + A+ S+++ NN++TKFG+ ALT+A +LV EM++ +E+ I
Sbjct: 644 YNEIKDNGAFALAQAIKSNANGALQSISVNNNYITKFGEVALTEAVELVQEMNDSRELYI 703

Query: 628 FF 629
            F
Sbjct: 704 QF 705


>gi|449520593|ref|XP_004167318.1| PREDICTED: uncharacterized protein LOC101226018, partial [Cucumis
           sativus]
          Length = 350

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/347 (61%), Positives = 256/347 (73%), Gaps = 19/347 (5%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSF--------CQARDAPLSFALPFSGTRRCFRLKRLV 54
           STSTIS  SHPK+  R   + S             A  A LS     +   R FRL+ LV
Sbjct: 5   STSTISFCSHPKIFLRLHSLGSPRVGFGASGLNYHANGAFLSV----THRTRGFRLRNLV 60

Query: 55  VKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVE 110
           +KA  R + G R+    RRVYR SQ+ ++   APVKQ+AS V+PAGV V  TFVLWKLVE
Sbjct: 61  LKATLRSDSGSRRAATSRRVYRDSQTQSSSLVAPVKQLASTVLPAGVLVVFTFVLWKLVE 120

Query: 111 KLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
           +L++ K  + S       ++  GAG NL      K+ RE+K  LN+FAKELR F SVDM+
Sbjct: 121 RLMVQKSDKSSSSVKNKWSF--GAGINLFPDLAAKVDREAKLKLNDFAKELRTFRSVDMT 178

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
            RNFGDEGLFFLAESLGYNQT EEV+F+ANGITA GIKAFDGVLQSNI LKTL+LSGNPI
Sbjct: 179 ARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLSGNPI 238

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GD+GVK LCD+LV+N+ +E L+L+S D+ DEGAKA++E+LKNNS LR++ELNNNMIDYSG
Sbjct: 239 GDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRIIELNNNMIDYSG 298

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           FTSL  ALLEN+TIR++HL GNYGGALGANALAKGLEGNKSLR +HL
Sbjct: 299 FTSLGGALLENNTIRNIHLTGNYGGALGANALAKGLEGNKSLR-VHL 344



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 79/129 (61%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           ++ K  ++   +++   + GDEG   +A++L  N+T+  ++   N I ++G  A   VL+
Sbjct: 164 DFAKELRTFRSVDMTARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQ 223

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N ++ +LDL+ NPIG DG K L ++L  + +I TL+L    +G  GA+ V++ML+ N++
Sbjct: 224 SNIILKTLDLSGNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSS 283

Query: 501 ISILDLRAN 509
           + I++L  N
Sbjct: 284 LRIIELNNN 292



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 1/169 (0%)

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           E  T RS+ +     G  G   LA+ L  N+++ E++   N I  EGI+A   G+     
Sbjct: 168 ELRTFRSVDMTARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAF-DGVLQSNI 226

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            L  LD+  N I   G   + + + N  S+  + L   D+GDEGA+ +++ LK N ++  
Sbjct: 227 ILKTLDLSGNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRI 286

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           I+L  N I   G +++   L +N+ I ++ L  N  GA GA AL++ L+
Sbjct: 287 IELNNNMIDYSGFTSLGGALLENNTIRNIHLTGNYGGALGANALAKGLE 335



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 1/153 (0%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   LAE+L  N T+  ++ + N   A G  A    L+ N  L+ L L GN IGD+G++ 
Sbjct: 186 GLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLSGNPIGDDGVKT 245

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L   L      +  L + +  +  +GA  V+E +KN  SL  I L  N I   G   +  
Sbjct: 246 LCD-LLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRIIELNNNMIDYSGFTSLGG 304

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           AL +N TI  I L GN   + GA+A+A+ L+ N
Sbjct: 305 ALLENNTIRNIHLTGNYGGALGANALAKGLEGN 337



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+   +   +G F +AE +   +++  +N   N I  EG +     L+ N  + T+DL 
Sbjct: 175 VDMTARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLS 234

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I   G   +  +L +NS I +L L    +G +GAKA+SE+LK + ++  ++L    I
Sbjct: 235 GNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRIIELNNNMI 294

Query: 484 GASGAEFVADMLRYNNTISILDLRAN 509
             SG   +   L  NNTI  + L  N
Sbjct: 295 DYSGFTSLGGALLENNTIRNIHLTGN 320



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 4/187 (2%)

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           L  N  AK L   ++ R + +   + GDEG+  L   L   +  +  ++   N I+A+G 
Sbjct: 160 LKLNDFAKEL---RTFRSVDMTARNFGDEGLFFLAESLGYNQ-TVEEVNFSANGITAEGI 215

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                 +++   L  ++L  N IGD+G + + D L  N +I T+ L   ++  +GA A++
Sbjct: 216 KAFDGVLQSNIILKTLDLSGNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVS 275

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            +LK+NS +  ++L  N I   G  +L   L  +  I  + L     GA GA  +A  L 
Sbjct: 276 EMLKNNSSLRIIELNNNMIDYSGFTSLGGALLENNTIRNIHLTGNYGGALGANALAKGLE 335

Query: 497 YNNTISI 503
            N ++ +
Sbjct: 336 GNKSLRV 342



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 8/204 (3%)

Query: 392 INLYMN---DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           INL+ +    +  E   K+ D  K+ RT  ++D+   N   +G   +A  L  N  +  +
Sbjct: 144 INLFPDLAAKVDREAKLKLNDFAKELRTFRSVDMTARNFGDEGLFFLAESLGYNQTVEEV 203

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           + + N I A+G KA   VL+ +  + TL L    IG  G + + D+L  N++I  L L +
Sbjct: 204 NFSANGITAEGIKAFDGVLQSNIILKTLDLSGNPIGDDGVKTLCDLLVNNSSIETLRLNS 263

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
             + DE   G   +S       SL+ +   +  I+Y  G   L  +  + N  + +I L 
Sbjct: 264 TDVGDE---GAKAVSEMLKNNSSLRIIELNNNMIDY-SGFTSLGGAL-LENNTIRNIHLT 318

Query: 569 FNEIRDDGAFAIAQALKANEDVAV 592
            N     GA A+A+ L+ N+ + V
Sbjct: 319 GNYGGALGANALAKGLEGNKSLRV 342


>gi|145344673|ref|XP_001416852.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577078|gb|ABO95145.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 471

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/476 (43%), Positives = 300/476 (63%), Gaps = 32/476 (6%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           + RE+K+ L +   ELR   +VD SG+N GDEG  F+AE+  YN  A  V  +ANGI   
Sbjct: 19  ITREAKRMLRDVMDELRRVQTVDASGKNLGDEGTCFIAEAFAYNNVATCVDMSANGIGVE 78

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G+ A    L+ N  L  L+L+ N +GDEG K L D L  +  +  + L++  + DEGA+A
Sbjct: 79  GVTALCEALKCNDTLTMLSLASNSLGDEGAKVLADYLKTDEKITTINLNACSIGDEGARA 138

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IAE LK N+ +  LE+NNNM+DY G  +LA+A  +NST+  L L+GNY G LGA AL   
Sbjct: 139 IAEALKTNTTITSLEMNNNMVDYEGSGALAQAFAQNSTVELLALSGNYVGTLGAAALGAA 198

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            + N  LR L L+GN IG+EG   L  GL++RK K+  LD+GNNSI  +    + +Y+K+
Sbjct: 199 FKENTGLRSLQLNGNDIGNEGCIKLCEGLAARKDKINNLDLGNNSIGPEAGPALRDYLKD 258

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L  +NLYMN++ ++G   +A++LK N+ I  +D+GGNNI + GA  +A  L+DN  +
Sbjct: 259 DDALTHLNLYMNELANDGCAAVAESLKDNKKIELLDIGGNNIGAFGAEKLAEALRDNESL 318

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            +L+L YNPIG  G KAL+E +KFHG +NT+++GWC+IG  G    AD ++Y++++++LD
Sbjct: 319 VTLELGYNPIGVPGGKALAETVKFHGKLNTMRMGWCKIGKEGGFAFADAIKYSSSLAVLD 378

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSI 565
           LR N L D+                                G   LAQS  VVNE LT++
Sbjct: 379 LRGNDLGDD--------------------------------GVAALAQSLGVVNEVLTNL 406

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           DL +NEI+D GAFA+AQA+K N D ++ +L++ NN+LTKFG+ ALT+A +LV EM+
Sbjct: 407 DLGYNEIKDKGAFALAQAIKNNADGSLQTLSINNNYLTKFGEVALTEAVELVQEMN 462



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 33/369 (8%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL----------- 186
           +LS  +  L  E  + L ++ K     ++++++  + GDEG   +AE+L           
Sbjct: 95  MLSLASNSLGDEGAKVLADYLKTDEKITTINLNACSIGDEGARAIAEALKTNTTITSLEM 154

Query: 187 -----------------GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
                              N T E ++ + N +   G  A     + N  L++L L+GN 
Sbjct: 155 NNNMVDYEGSGALAQAFAQNSTVELLALSGNYVGTLGAAALGAAFKENTGLRSLQLNGND 214

Query: 230 IGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           IG+EG   LC+ L      +  L L +  +  E   A+ + LK++  L  L L  N +  
Sbjct: 215 IGNEGCIKLCEGLAARKDKINNLDLGNNSIGPEAGPALRDYLKDDDALTHLNLYMNELAN 274

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AE+L +N  I  L + GN  GA GA  LA+ L  N+SL  L L  N IG  G +
Sbjct: 275 DGCAAVAESLKDNKKIELLDIGGNNIGAFGAEKLAEALRDNESLVTLELGYNPIGVPGGK 334

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   +    GKL  + +G   I  +G F  A+ IK   SL  ++L  ND+GD+G   +A
Sbjct: 335 ALAETVKFH-GKLNTMRMGWCKIGKEGGFAFADAIKYSSSLAVLDLRGNDLGDDGVAALA 393

Query: 409 DALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNS--VITSLDLAYNPIGADGAKALSE 465
            +L   N  +T +DLG N I  KGA A+A+ +K+N+   + +L +  N +   G  AL+E
Sbjct: 394 QSLGVVNEVLTNLDLGYNEIKDKGAFALAQAIKNNADGSLQTLSINNNYLTKFGEVALTE 453

Query: 466 VLKFHGNIN 474
            ++    +N
Sbjct: 454 AVELVQEMN 462


>gi|255071059|ref|XP_002507611.1| predicted protein [Micromonas sp. RCC299]
 gi|226522886|gb|ACO68869.1| predicted protein [Micromonas sp. RCC299]
          Length = 559

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/477 (42%), Positives = 301/477 (63%), Gaps = 32/477 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           ++  E K+ L +   E+R +++VD  GRN GD G  +++E+L +N  A  +  +ANG+  
Sbjct: 106 EIHGEFKRQLRDMMSEMRRYNTVDFHGRNLGDNGSAYISEALAFNDVATCIDLSANGMGE 165

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG+ A    L+SN AL+ L+L+ N + D G   L + L  ++ +  L L+S  + D GA 
Sbjct: 166 AGVFAICEALKSNSALEMLSLASNNLQDAGAVALANYLQSDSSINTLNLNSCGISDTGAI 225

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+AE+LK N+ L  LELNNN IDY G  ++AEAL EN+T+ +L ++GNY G LGA+ALAK
Sbjct: 226 ALAEMLKKNTSLVALELNNNNIDYEGTCAIAEALSENATLTTLSISGNYIGGLGASALAK 285

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GL  NK L+ L ++GN IG+ G+ AL   +S+R+ KL  LD+GNN I  +   ++A YIK
Sbjct: 286 GLVKNKGLKGLIINGNDIGNIGVEALCKAISARETKLTNLDMGNNGIGHESGEYIAAYIK 345

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K L  +NLYMN++ D GA  + +AL+QN  I  +D+GGNNI   GA ++   LK+N  
Sbjct: 346 TDKELASLNLYMNELCDLGAIAVCNALRQNTAIQILDIGGNNILQAGAESLGDALKENIS 405

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           + +L++ YNPIG  G  AL++  KFH  + TL++GWC+I   GA  +AD ++YN  ++ L
Sbjct: 406 LRTLEIGYNPIGPKGGAALADAFKFHSKLTTLRMGWCKITKEGARHIADAMKYNEHVTTL 465

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
           DLR N L DE C+                                 +AQS  +VNE LTS
Sbjct: 466 DLRGNELGDEGCA--------------------------------AIAQSLGMVNENLTS 493

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           +DL +NEI+D+GAFA+AQA+K N D ++TS++L NN++TKFG+ ALT+A +LV E++
Sbjct: 494 LDLGYNEIKDNGAFALAQAIKNNADASITSISLNNNYITKFGEVALTEAVELVQELN 550


>gi|412985803|emb|CCO17003.1| predicted protein [Bathycoccus prasinos]
          Length = 772

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/485 (41%), Positives = 300/485 (61%), Gaps = 33/485 (6%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           + RE K+   +   ELR F +VD++GR  GD+G   +AE + +N+TA  V F ANG    
Sbjct: 320 MSREFKRLCRDCVDELRRFQTVDLNGRKLGDDGAKIIAEGIAFNETASCVDFGANGFGET 379

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
            + A    +  N  L+ ++ + NP+ D GV  L + L  +  +  L ++S    D+GAKA
Sbjct: 380 AMLAITEAMSQNKKLRMVSFASNPLLDVGVIALANYLKTDTKITTLNINSCSFGDDGAKA 439

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE LK+N+ +  LE+NNN IDY G T+LA+AL +N T+  + L GNY GALG  ALA  
Sbjct: 440 LAEALKSNTSITSLEMNNNAIDYEGSTALAQALAQNDTLEHVSLQGNYVGALGTVALANA 499

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  N SL+ L L+GN IG+EG   L   LS RK KL  LDIGNN+I       + +Y+K+
Sbjct: 500 LVDNSSLKSLTLNGNDIGNEGCVKLCEALSKRKTKLTNLDIGNNAIGPDSGAALCDYLKD 559

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L  +NLYMN++ D+GA K++ ALK N T+  +D+GGNNI + GA A+++ LK+N+ +
Sbjct: 560 DDALTHLNLYMNELSDDGAVKMSPALKDNATLKNLDIGGNNIGALGAMALSKSLKENTAL 619

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T+L+L YNPIG DG  AL+E LKFH  I TL++GWC+IG  GA  +AD + YN +++ LD
Sbjct: 620 TTLELGYNPIGKDGGIALAESLKFHAKIETLRVGWCKIGKEGAAALADTITYNESLTTLD 679

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSI 565
           LR N L D+                                G + L +S  VVNE L+++
Sbjct: 680 LRGNELGDD--------------------------------GVRSLGKSLAVVNEHLSTL 707

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE-KE 624
           DL +NEI+D+GAFA+A A+K N + A+ ++++ NN++TK G+ AL +A +LV E++E +E
Sbjct: 708 DLGYNEIKDEGAFALAAAIKNNAEGALENVSVNNNYITKLGEVALIEAAELVAELNEDRE 767

Query: 625 VNIFF 629
           + + F
Sbjct: 768 LYVQF 772


>gi|308801333|ref|XP_003077980.1| unnamed protein product [Ostreococcus tauri]
 gi|116056431|emb|CAL52720.1| unnamed protein product [Ostreococcus tauri]
          Length = 517

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/489 (43%), Positives = 307/489 (62%), Gaps = 37/489 (7%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
            TGK    +++ L +   ELR  ++VD+SG+N GDEG  F+AE+  YN  A  V  +ANG
Sbjct: 65  ITGK----ARRMLRDVMDELRRVATVDVSGKNLGDEGACFIAEAFAYNNVASCVDMSANG 120

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I   G  A    L+ N  L  L+L+ NPIGD+G K L + L  +  +  L L++  + DE
Sbjct: 121 IGLDGTTALCEALKCNDTLTMLSLASNPIGDDGAKVLAEYLKVDKKITTLNLNACSIGDE 180

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAIAE LK N+ +  LE+NNNM+DY G  ++A+AL +N+T+  L LNGNY GALGA++
Sbjct: 181 GAKAIAEALKMNTTIISLEMNNNMVDYEGSGAMAQALAQNTTLELLALNGNYVGALGASS 240

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
               L+ N  LR L L+GN IG+EG   L  GL++R  K+  LD+GNNSI       + +
Sbjct: 241 FGAALKENTGLRSLQLNGNDIGNEGCIKLCEGLAARSEKINNLDLGNNSIGPAAGPALRD 300

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           Y+K   SL  +NLYMN++ ++G   IA+ALK N+ I  +D+GGNNI   GA  +A  L+D
Sbjct: 301 YLKVDDSLTHLNLYMNELANDGCAAIAEALKDNKKIEMLDIGGNNIGGYGAEQLALALRD 360

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           NS +T+L+L YNPIG  G KAL+E +KFHG + T+++GWC+IG  G    A+ ++Y+ ++
Sbjct: 361 NSSLTTLELGYNPIGVPGGKALAETVKFHGALGTMRMGWCKIGKEGGFAFAEAIKYSQSL 420

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           ++LDLR N L D+                                G   L+QS  VVNE 
Sbjct: 421 AVLDLRGNDLGDD--------------------------------GVAALSQSLAVVNEV 448

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           LT++DL +NEI+D GAFA+AQA+K N + ++ +L++ NN+LTKFG+ ALT+A +LV EM+
Sbjct: 449 LTNLDLGYNEIKDKGAFALAQAIKNNAEGSLQTLSINNNYLTKFGEVALTEAVELVEEMN 508

Query: 622 -EKEVNIFF 629
            ++++ I F
Sbjct: 509 PDRDLYIQF 517



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 175/369 (47%), Gaps = 33/369 (8%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAE------------- 184
           +LS  +  +  +  + L E+ K  +  ++++++  + GDEG   +AE             
Sbjct: 141 MLSLASNPIGDDGAKVLAEYLKVDKKITTLNLNACSIGDEGAKAIAEALKMNTTIISLEM 200

Query: 185 ---------------SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
                          +L  N T E ++   N + A G  +F   L+ N  L++L L+GN 
Sbjct: 201 NNNMVDYEGSGAMAQALAQNTTLELLALNGNYVGALGASSFGAALKENTGLRSLQLNGND 260

Query: 230 IGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           IG+EG   LC+ L   +  +  L L +  +      A+ + LK +  L  L L  N +  
Sbjct: 261 IGNEGCIKLCEGLAARSEKINNLDLGNNSIGPAAGPALRDYLKVDDSLTHLNLYMNELAN 320

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AEAL +N  I  L + GN  G  GA  LA  L  N SL  L L  N IG  G +
Sbjct: 321 DGCAAIAEALKDNKKIEMLDIGGNNIGGYGAEQLALALRDNSSLTTLELGYNPIGVPGGK 380

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   +    G L  + +G   I  +G F  AE IK  +SL  ++L  ND+GD+G   ++
Sbjct: 381 ALAETVKFH-GALGTMRMGWCKIGKEGGFAFAEAIKYSQSLAVLDLRGNDLGDDGVAALS 439

Query: 409 DALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNS--VITSLDLAYNPIGADGAKALSE 465
            +L   N  +T +DLG N I  KGA A+A+ +K+N+   + +L +  N +   G  AL+E
Sbjct: 440 QSLAVVNEVLTNLDLGYNEIKDKGAFALAQAIKNNAEGSLQTLSINNNYLTKFGEVALTE 499

Query: 466 VLKFHGNIN 474
            ++    +N
Sbjct: 500 AVELVEEMN 508


>gi|384246674|gb|EIE20163.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
          Length = 660

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 206/500 (41%), Positives = 301/500 (60%), Gaps = 48/500 (9%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           +L +E+ Q LN    ELR   + D+S +N G+EG  F++E   +N        + NGI  
Sbjct: 194 QLQKEAVQRLNVMIDELRNSQNADLSAKNLGEEGCIFISEGFAFNDRCVAADLSKNGIGV 253

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            GI A    L  N  L+TL L  N IGDEG + L   L  ++ + RL LS  ++ D+GA 
Sbjct: 254 KGITAVTDALSHNDVLQTLVLDTNSIGDEGAEVLAKHLTGDSTIRRLNLSGNNVGDKGAT 313

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +AE+LK N+ L  LELN+N IDY G  +LAEA+ EN+++ +LHL+ NY GALGA+ LA 
Sbjct: 314 LLAEMLKMNTTLTSLELNSNNIDYDGALALAEAITENTSLSALHLSDNYIGALGASVLAN 373

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ NKSLRELH+ GN +G+EG+RA+   L  R+  +  LD GNNS++ +GA  +A  + 
Sbjct: 374 ALKKNKSLRELHMKGNELGNEGVRAICEALIERQSPVTSLDFGNNSLTEEGAEAIAR-VA 432

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +   L  +NLYMNDIGD G  K+A AL+ + ++ ++D+GGNN+   G +A+A  L+ N  
Sbjct: 433 DKAHLKELNLYMNDIGDAGIFKLAKALEGDSSLVSLDVGGNNVGPDGITALAGALRGNDT 492

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA-SGAEFVADMLRYNNTISI 503
           + +L+L YNPIG  GA AL++V+K+   + TLK+GWC +GA +GA+ VAD+L +NN+I++
Sbjct: 493 LRTLELGYNPIGDKGALALADVVKYDLKVETLKMGWCHVGADAGAKAVADLLMFNNSIAV 552

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEAL 562
           LDLR NGL +                                 GA  +A+S K   N+ L
Sbjct: 553 LDLRGNGLGN--------------------------------AGAAQIARSLKEHTNDKL 580

Query: 563 TSIDLAFNEIRDDGAFAIA------------QALKANEDVAVTSLNLANNFLTKFGQSAL 610
           T +DL +NEI+D+GA  +A            QALKAN + A   L +  N++ +FGQ AL
Sbjct: 581 TELDLGYNEIKDEGACTLAQARPRTPLSGFLQALKANPERAPRELKVNANYIGRFGQVAL 640

Query: 611 TDAKDLVYEMS-EKEVNIFF 629
           T+A D+VYEM+  +E+ I +
Sbjct: 641 TEALDMVYEMAGGREIVITY 660


>gi|307105454|gb|EFN53703.1| hypothetical protein CHLNCDRAFT_136530 [Chlorella variabilis]
          Length = 607

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 204/486 (41%), Positives = 302/486 (62%), Gaps = 35/486 (7%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L +E++Q LNEF   LR  ++ D+S +N GDEG  ++ ++L +N       F+ NGI   
Sbjct: 155 LAKEAQQRLNEFMDVLRNMATADLSAKNLGDEGFAYVVDALSFNDRCVAADFSKNGIGPQ 214

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G      VL SN  LKTL L  N +GDEG   L   L   + +  L LS  ++ D GAKA
Sbjct: 215 GCAQLCQVLTSNSGLKTLLLDTNTLGDEGAAMLATALAGGSRLTSLNLSGNNIGDAGAKA 274

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE+LK N+ L VLELN N+IDY G  +LAEAL +N+++++L L+ NY    GA  LA  
Sbjct: 275 LAEMLKTNTTLEVLELNGNVIDYEGVGALAEALAQNTSLKTLGLSDNYIQTPGAALLAAA 334

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L+EL++ GN +GDEGI+++   L   K +L  +D GNNS+  +GAF +AE ++ 
Sbjct: 335 LKENNTLQELYIKGNELGDEGIKSVCEALKQHK-ELKAVDFGNNSMGKEGAFALAELLRG 393

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
           C ++  +N+ MND+G++GA +IA A+K NR++  +D+GGNNI   GA A+A  LK N  +
Sbjct: 394 CTTITDVNINMNDVGNDGAFQIAAAIKDNRSLKLLDVGGNNIGEDGAKALAAALKGNEEL 453

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA-SGAEFVADMLRYNNTISIL 504
            SL+L+YNP+G +GA+A ++++K+   +  L +GWC++G+  G + VADML YNNTI  L
Sbjct: 454 RSLELSYNPMGPEGAQAFADIIKYDMKLEVLGMGWCKVGSGDGVKAVADMLMYNNTIRRL 513

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALT 563
           DLR NGL ++                                GA   ++ FK   N+AL 
Sbjct: 514 DLRGNGLGND--------------------------------GAIWFSRGFKEHTNDALR 541

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEK 623
            ++L +NEI+D+GA A+AQALKAN + A     +  N++TKFGQ ALT+A D+VY+M++K
Sbjct: 542 ELELGYNEIKDEGACALAQALKANPEGAPKEFKINANYITKFGQVALTEALDMVYDMAKK 601

Query: 624 EVNIFF 629
           E+ I F
Sbjct: 602 EITITF 607


>gi|302836580|ref|XP_002949850.1| hypothetical protein VOLCADRAFT_104495 [Volvox carteri f.
           nagariensis]
 gi|300264759|gb|EFJ48953.1| hypothetical protein VOLCADRAFT_104495 [Volvox carteri f.
           nagariensis]
          Length = 378

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/392 (41%), Positives = 230/392 (58%), Gaps = 45/392 (11%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    + D GA A+AE LK N+ L+ L+L+ N ID  G  +LA A+  +ST+  L L 
Sbjct: 19  LDLGQNGIGDSGAAALAEALKLNTRLQRLDLSGNAIDKEGAAALAAAVAASSTLEVLVLT 78

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL---------SSRKGKL 361
            NY G  GA +LA  L  N SLRELHL GN IGD G+ A+   L          +R G +
Sbjct: 79  DNYLGEAGALSLADALRANSSLRELHLKGNEIGDAGVAAICEALMVGGAGVGGEARHGDI 138

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           AVLD+GNNS++  GA  +   +   +SL  +NLYMNDIGD G  K+A A+  N+ +  +D
Sbjct: 139 AVLDLGNNSLTEAGAAVLTRLLSLKRSLKDLNLYMNDIGDIGVGKMAHAIADNKGLAVLD 198

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGW 480
           LGGNNI  KG +A+A  L+++  ++SL+L YNP+G +G K ++++ KF+   + TLK+GW
Sbjct: 199 LGGNNIGPKGVAALAGALRNHGSLSSLELGYNPLGPEGTKTVTDLAKFNLPKLTTLKMGW 258

Query: 481 CQI-GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
           C++ G  GA  ++D+L  N+T+S LDLR N L ++                         
Sbjct: 259 CKVAGGDGARALSDLLLLNSTLSHLDLRGNSLGND------------------------- 293

Query: 540 LCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                  GA  L++  K   N  L  +DL +NEI+DDGA A+AQALKAN + A   L L 
Sbjct: 294 -------GAILLSRGLKAAENSKLVDLDLGYNEIKDDGACALAQALKANPEGAPKELKLN 346

Query: 599 NNFLTKFGQSALTDAKDLVYEMSE-KEVNIFF 629
           +N++TKFGQ AL++A D+VY+M + K   + F
Sbjct: 347 SNYITKFGQVALSEAVDMVYDMGKGKMTTVHF 378



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 168/329 (51%), Gaps = 15/329 (4%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +    NGI  +G  A    L+ N  L+ L+LSGN I  EG   L   +  ++ +E L L+
Sbjct: 19  LDLGQNGIGDSGAAALAEALKLNTRLQRLDLSGNAIDKEGAAALAAAVAASSTLEVLVLT 78

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL----------ENSTI 304
              L + GA ++A+ L+ NS LR L L  N I  +G  ++ EAL+           +  I
Sbjct: 79  DNYLGEAGALSLADALRANSSLRELHLKGNEIGDAGVAAICEALMVGGAGVGGEARHGDI 138

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             L L  N     GA  L + L   +SL++L+L+ N IGD G+  +   ++  KG LAVL
Sbjct: 139 AVLDLGNNSLTEAGAAVLTRLLSLKRSLKDLNLYMNDIGDIGVGKMAHAIADNKG-LAVL 197

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLG 423
           D+G N+I  KG   +A  ++N  SL  + L  N +G EG + + D  K N   +TT+ +G
Sbjct: 198 DLGGNNIGPKGVAALAGALRNHGSLSSLELGYNPLGPEGTKTVTDLAKFNLPKLTTLKMG 257

Query: 424 GNNIH-SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGW 480
              +    GA A++ +L  NS ++ LDL  N +G DGA  LS  LK   N  +  L LG+
Sbjct: 258 WCKVAGGDGARALSDLLLLNSTLSHLDLRGNSLGNDGAILLSRGLKAAENSKLVDLDLGY 317

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRAN 509
            +I   GA  +A  L+ N   +  +L+ N
Sbjct: 318 NEIKDDGACALAQALKANPEGAPKELKLN 346



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 158/319 (49%), Gaps = 15/319 (4%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+     GD G   LAE+L  N   + +  + N I   G  A    + ++  L+ L
Sbjct: 16  LTTLDLGQNGIGDSGAAALAEALKLNTRLQRLDLSGNAIDKEGAAALAAAVAASSTLEVL 75

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL----------KNN 273
            L+ N +G+ G   L D L  N+ +  L L   ++ D G  AI E L            +
Sbjct: 76  VLTDNYLGEAGALSLADALRANSSLRELHLKGNEIGDAGVAAICEALMVGGAGVGGEARH 135

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             + VL+L NN +  +G   L   L    +++ L+L  N  G +G   +A  +  NK L 
Sbjct: 136 GDIAVLDLGNNSLTEAGAAVLTRLLSLKRSLKDLNLYMNDIGDIGVGKMAHAIADNKGLA 195

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWI 392
            L L GN+IG +G+ AL   L +  G L+ L++G N +  +G   V +  K N   L  +
Sbjct: 196 VLDLGGNNIGPKGVAALAGALRNH-GSLSSLELGYNPLGPEGTKTVTDLAKFNLPKLTTL 254

Query: 393 NL-YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK--DNSVITSLD 449
            + +    G +GA  ++D L  N T++ +DL GN++ + GA  ++R LK  +NS +  LD
Sbjct: 255 KMGWCKVAGGDGARALSDLLLLNSTLSHLDLRGNSLGNDGAILLSRGLKAAENSKLVDLD 314

Query: 450 LAYNPIGADGAKALSEVLK 468
           L YN I  DGA AL++ LK
Sbjct: 315 LGYNEIKDDGACALAQALK 333



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 14/199 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+   +++   + GD G+  +A ++  N+    +    N I   G+ A  G L+++ +L 
Sbjct: 164 RSLKDLNLYMNDIGDIGVGKMAHAIADNKGLAVLDLGGNNIGPKGVAALAGALRNHGSLS 223

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL------RDEGAKAIAELLKNNSI 275
           +L L  NP+G EG K + D+    A     +L+++ +        +GA+A+++LL  NS 
Sbjct: 224 SLELGYNPLGPEGTKTVTDL----AKFNLPKLTTLKMGWCKVAGGDGARALSDLLLLNST 279

Query: 276 LRVLELNNNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEGNK--S 331
           L  L+L  N +   G   L+  L   ENS +  L L  N     GA ALA+ L+ N   +
Sbjct: 280 LSHLDLRGNSLGNDGAILLSRGLKAAENSKLVDLDLGYNEIKDDGACALAQALKANPEGA 339

Query: 332 LRELHLHGNSIGDEGIRAL 350
            +EL L+ N I   G  AL
Sbjct: 340 PKELKLNSNYITKFGQVAL 358



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 23/172 (13%)

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI 529
           H ++ TL LG   IG SGA  +A+ L+ N  +  LDL  N +  E  +         S +
Sbjct: 13  HPHLTTLDLGQNGIGDSGAAALAEALKLNTRLQRLDLSGNAIDKEGAAALAAAVAASSTL 72

Query: 530 YSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA- 586
             L       L  NYL   GA  LA + +  N +L  + L  NEI D G  AI +AL   
Sbjct: 73  EVL------VLTDNYLGEAGALSLADALR-ANSSLRELHLKGNEIGDAGVAAICEALMVG 125

Query: 587 ---------NEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
                    + D+AV  L+L NN LT+ G + LT  + L  + S K++N++ 
Sbjct: 126 GAGVGGEARHGDIAV--LDLGNNSLTEAGAAVLT--RLLSLKRSLKDLNLYM 173


>gi|297849646|ref|XP_002892704.1| hypothetical protein ARALYDRAFT_888610 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338546|gb|EFH68963.1| hypothetical protein ARALYDRAFT_888610 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 195

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/260 (52%), Positives = 154/260 (59%), Gaps = 88/260 (33%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           +ELHLHGNSIGDEG RALM+GLSS KG      I ++S                      
Sbjct: 15  QELHLHGNSIGDEGTRALMAGLSSHKG----FSIEHSS---------------------- 48

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
                    +GAEKIADALKQNR+I TIDLGGNNIH++G +AIA+ LKDN++IT+     
Sbjct: 49  ---------DGAEKIADALKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITT----- 94

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
                           FHGN+  LKLGWCQI A GAE +ADMLRYNNTIS+LDLRANGLR
Sbjct: 95  ----------------FHGNVKMLKLGWCQIAAKGAEHIADMLRYNNTISVLDLRANGLR 138

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
           DE                                GA CLA+S KVVNEALTS+DL F EI
Sbjct: 139 DE--------------------------------GASCLARSLKVVNEALTSVDLGFIEI 166

Query: 573 RDDGAFAIAQALKANEDVAV 592
           RDDGAFAIAQALKANEDV V
Sbjct: 167 RDDGAFAIAQALKANEDVTV 186



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 104/209 (49%), Gaps = 43/209 (20%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           + LHL+GN                            SIGDEG RALM+GLSS KG     
Sbjct: 15  QELHLHGN----------------------------SIGDEGTRALMAGLSSHKG----F 42

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT----- 419
            I +   S+ GA  +A+ +K  +S+  I+L  N+I  EG   IA ALK N  ITT     
Sbjct: 43  SIEH---SSDGAEKIADALKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITTFHGNV 99

Query: 420 --IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTL 476
             + LG   I +KGA  IA +L+ N+ I+ LDL  N +  +GA  L+  LK  +  + ++
Sbjct: 100 KMLKLGWCQIAAKGAEHIADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEALTSV 159

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILD 505
            LG+ +I   GA  +A  L+ N  +++ D
Sbjct: 160 DLGFIEIRDDGAFAIAQALKANEDVTVRD 188



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 17/173 (9%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           + L+L GN IGDEG + L       AG+   +  S++   +GA+ IA+ LK N  +  ++
Sbjct: 15  QELHLHGNSIGDEGTRALM------AGLSSHKGFSIEHSSDGAEKIADALKQNRSIATID 68

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG---------GALGANALAKGLEGNKS 331
           L  N I   G  ++A+AL +N+ I + H  GN            A GA  +A  L  N +
Sbjct: 69  LGGNNIHAEGVNAIAQALKDNAIITTFH--GNVKMLKLGWCQIAAKGAEHIADMLRYNNT 126

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           +  L L  N + DEG   L   L      L  +D+G   I   GAF +A+ +K
Sbjct: 127 ISVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFIEIRDDGAFAIAQALK 179



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 12/155 (7%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           AG +   GF+ +   +  + + +  K+ R+ +++D+ G N   EG+  +A++L  N  A 
Sbjct: 34  AGLSSHKGFSIEHSSDGAEKIADALKQNRSIATIDLGGNNIHAEGVNAIAQALKDN--AI 91

Query: 194 EVSFAAN---------GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-V 243
             +F  N          I A G +    +L+ N  +  L+L  N + DEG  CL   L V
Sbjct: 92  ITTFHGNVKMLKLGWCQIAAKGAEHIADMLRYNNTISVLDLRANGLRDEGASCLARSLKV 151

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            N  +  + L  +++RD+GA AIA+ LK N  + V
Sbjct: 152 VNEALTSVDLGFIEIRDDGAFAIAQALKANEDVTV 186


>gi|156390401|ref|XP_001635259.1| predicted protein [Nematostella vectensis]
 gi|156222351|gb|EDO43196.1| predicted protein [Nematostella vectensis]
          Length = 398

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 158/430 (36%), Positives = 222/430 (51%), Gaps = 44/430 (10%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +D+ G   GDEG   +A++L  N T E++    N I   G  A    L +N  L+ L
Sbjct: 6   LEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKL 65

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQL--SSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L GN IGD+G   +   L+ N+ +E+L L  + +   DEGA AIA+ L  NS L  L+L
Sbjct: 66  DLEGNKIGDDGAIAIAKALMTNSTLEKLDLEGNKIGDEDEGAIAIAKALMTNSTLEKLDL 125

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  ++A+AL+ NST+  L L GN  G  GA A+AK L  N +L +L L GN 
Sbjct: 126 EGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNK 185

Query: 342 IGDEG----IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           IGDEG     +ALM+  + +K     LD+  N I  +GA  +A+ +    +L  ++L  N
Sbjct: 186 IGDEGAIAIAKALMTNSTLKK-----LDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGN 240

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IGDEGA  IA AL  N T+  +DL GN I  +GA AIA+ L  NS +  LDL  N IG 
Sbjct: 241 KIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGD 300

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
           +GA A+++ L  +  +  L L   +IG  GA  +A  L  N+T+  LDL  N + DE   
Sbjct: 301 EGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDE--- 357

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
                                        GA  +A++  + N  L  +DL  N+I D+GA
Sbjct: 358 -----------------------------GAIAIAKAL-MTNSTLKKLDLEGNKIGDEGA 387

Query: 578 FAIAQALKAN 587
            AIA+AL  N
Sbjct: 388 IAIAKALMTN 397



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/376 (38%), Positives = 204/376 (54%), Gaps = 12/376 (3%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +N  L+ L+L GN IGDEG   +   L+ N+ +E+L L    + DEGA AIA+ L  NS 
Sbjct: 2   TNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNST 61

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG--ALGANALAKGLEGNKSLR 333
           L  L+L  N I   G  ++A+AL+ NST+  L L GN  G    GA A+AK L  N +L 
Sbjct: 62  LEKLDLEGNKIGDDGAIAIAKALMTNSTLEKLDLEGNKIGDEDEGAIAIAKALMTNSTLE 121

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           +L L GN IGDEG  A+   L +    L  LD+  N I  +GA  +A+ +    +L  ++
Sbjct: 122 KLDLEGNKIGDEGAIAIAKALMTNS-TLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLD 180

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGDEGA  IA AL  N T+  +DL GN I  +GA AIA+ L  NS +  LDL  N
Sbjct: 181 LEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGN 240

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG +GA A+++ L  +  +  L L   +IG  GA  +A  L  N+T+  LDL  N + D
Sbjct: 241 KIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGD 300

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
           E      G      A+ +   +    L  N +  +GA  +A++  + N  L  +DL  N+
Sbjct: 301 E------GAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKAL-MTNSTLKKLDLEGNK 353

Query: 572 IRDDGAFAIAQALKAN 587
           I D+GA AIA+AL  N
Sbjct: 354 IGDEGAIAIAKALMTN 369



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/284 (40%), Positives = 160/284 (56%), Gaps = 9/284 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +D+ G   GDEG   +A++L  N T E++    N I   G  A    L +N  L+ L
Sbjct: 120 LEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKL 179

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L GN IGDEG   +   L+ N+ +++L L    + DEGA AIA+ L  NS L+ L+L  
Sbjct: 180 DLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEG 239

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++A+AL+ NST++ L L GN  G  GA A+AK L  N +L++L L GN IG
Sbjct: 240 NKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIG 299

Query: 344 DEG----IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           DEG     +ALM+  + +K     LD+  N I  +GA  +A+ +    +L  ++L  N I
Sbjct: 300 DEGAIAIAKALMTNSTLKK-----LDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKI 354

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           GDEGA  IA AL  N T+  +DL GN I  +GA AIA+ L  NS
Sbjct: 355 GDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNS 398



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 154/293 (52%), Gaps = 12/293 (4%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           + NST+  L L GN  G  GA A+AK L  N +L +L L GN IGDEG  A+   L +  
Sbjct: 1   MTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNS 60

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG--DEGAEKIADALKQNRT 416
             L  LD+  N I   GA  +A+ +    +L  ++L  N IG  DEGA  IA AL  N T
Sbjct: 61  -TLEKLDLEGNKIGDDGAIAIAKALMTNSTLEKLDLEGNKIGDEDEGAIAIAKALMTNST 119

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  +DL GN I  +GA AIA+ L  NS +  LDL  N IG +GA A+++ L  +  +  L
Sbjct: 120 LEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKL 179

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L   +IG  GA  +A  L  N+T+  LDL  N + DE      G      A+ +   + 
Sbjct: 180 DLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDE------GAIAIAKALMTNSTLK 233

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
              L  N +  +GA  +A++  + N  L  +DL  N+I D+GA AIA+AL  N
Sbjct: 234 KLDLEGNKIGDEGAIAIAKAL-MTNSTLKKLDLEGNKIGDEGAIAIAKALMTN 285


>gi|194678537|ref|XP_584462.3| PREDICTED: protein NLRC3 [Bos taurus]
 gi|297490053|ref|XP_002697992.1| PREDICTED: protein NLRC3 [Bos taurus]
 gi|296473604|tpg|DAA15719.1| TPA: NLR family, CARD domain containing 3 [Bos taurus]
          Length = 1065

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 234/439 (53%), Gaps = 7/439 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S   L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 625  SPGVLQSLLPQLLYCRSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+ +AE
Sbjct: 685  ALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARCMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L  
Sbjct: 745  ALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L+ L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  +A  ++   +
Sbjct: 805  NQGLKSLDLQSNSISDPGVAALMGALCTNQTLLS-LNLRENSISPEGAQDLARALRTNST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ +A+A+++NRT+T++ L  N I +  A A+ + L+ N+ +TSL
Sbjct: 864  LKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQLNTSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +  EV +G   L+       SL+ +      +  ++GA C+A +    N  L  I+L 
Sbjct: 984  NTI--EV-AGAKALASALKVNSSLQRLNLQENSLG-MEGAICVATALS-GNHGLRHINLQ 1038

Query: 569  FNEIRDDGAFAIAQALKAN 587
             N I + GA  I++A+K N
Sbjct: 1039 GNHIGESGARMISEAIKTN 1057



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 194/383 (50%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 668  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 727

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I   G   +AEAL  N T+  LHL  N  G +G   +A  L+ N+SL+EL    
Sbjct: 728  SLQSNRIRDDGARCMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSS 787

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL +NL  N I
Sbjct: 788  NSIGDGGAKALAEALMVNQG-LKSLDLQSNSISDPGVAALMGALCTNQTLLSLNLRENSI 846

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ +A AL+ N T+ ++DL  N +H +GA A+A  +++N  +TSL L +N I A  
Sbjct: 847  SPEGAQDLARALRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGA 906

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            AKAL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 907  AKALGQALQLNTSLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAP----- 961

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
                                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 962  ---------------------------GAQALGEAL-AVNRTLEILDLRGNTIEVAGAKA 993

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 994  LASALKVNS--SLQRLNLQENSL 1014



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 170/340 (50%), Gaps = 13/340 (3%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 640 RSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTTL 699

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  NSIG +G +AL   L   +  LA L + +N I   GA  +AE +   ++L  ++L 
Sbjct: 700 DLRSNSIGPQGAKALADALKINR-TLASLSLQSNRIRDDGARCMAEALATNRTLSVLHLQ 758

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  G +++ADALKQNR++  +    N+I   GA A+A  L  N  + SLDL  N I
Sbjct: 759 KNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMVNQGLKSLDLQSNSI 818

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I   GA+ +A  LR N+T+  LDL AN L D+ 
Sbjct: 819 SDPGVAALMGALCTNQTLLSLNLRENSISPEGAQDLARALRTNSTLKSLDLTANLLHDQ- 877

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIR 573
                G      A+   + +    L  N++Q   AK L Q+ ++ N +LTS+DL  N I 
Sbjct: 878 -----GAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQL-NTSLTSLDLQENAIG 931

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D+GA A+A ALK N    +T+L L    +   G  AL +A
Sbjct: 932 DEGASAVASALKVN--TVLTALYLQVASIGAPGAQALGEA 969


>gi|159466436|ref|XP_001691415.1| hypothetical protein CHLREDRAFT_170113 [Chlamydomonas reinhardtii]
 gi|158279387|gb|EDP05148.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 364

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/411 (36%), Positives = 225/411 (54%), Gaps = 60/411 (14%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           VL S + ++TL L+ N +GD G + L   +  +  +  L L    + D GA A+AE LK 
Sbjct: 1   VLPSAV-IQTLVLNTNSLGDGGSEQLAKAIAGHPHLTTLDLGQNGIGDAGATALAEALKL 59

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L+ L+L+ N ID  G  +LA A+  +ST+  L L  NY G  GA ALA  L  N S+
Sbjct: 60  NTRLQRLDLSGNAIDKDGAAALAGAVAGSSTLEVLVLTDNYLGEAGALALADALRANTSV 119

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           +ELHL GN +GD G+ A+   L SR   +  LD+GNNSI+  GA H+   +   +SL  +
Sbjct: 120 KELHLKGNEMGDAGVTAICEALMSRACDITFLDLGNNSITEAGATHLNRLLFQKRSLKEL 179

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++YMNDIGDEG                          KG + +A  L+++  ++SL+L Y
Sbjct: 180 HMYMNDIGDEGV------------------------GKGVAVLAGALRNHGALSSLELGY 215

Query: 453 NPIGADGAKALSEVLKFH-GNINTLKLGWCQI-GASGAEFVADMLRYNNTISILDLRANG 510
           NP+G +G K ++++ KF    + TLKLGWC++ G  GA  ++D+L  N +++ LDLR N 
Sbjct: 216 NPLGPEGTKTITDLAKFQLPKLTTLKLGWCKVAGGDGARALSDLLLLNASLTHLDLRGNS 275

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAF 569
           L ++                                GA  L++  K   N  L  +DL +
Sbjct: 276 LGND--------------------------------GAILLSRGLKAAENSKLADLDLGY 303

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 620
           NEI+DDGA A+AQALKAN + A   L L +N++T+FGQ AL++A D V++M
Sbjct: 304 NEIKDDGACALAQALKANPEGAPRELKLNSNYITRFGQVALSEAVDQVFDM 354



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 162/304 (53%), Gaps = 8/304 (2%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   LA+++  +     +    NGI  AG  A    L+ N  L+ L+LSGN I  
Sbjct: 16  SLGDGGSEQLAKAIAGHPHLTTLDLGQNGIGDAGATALAEALKLNTRLQRLDLSGNAIDK 75

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           +G   L   +  ++ +E L L+   L + GA A+A+ L+ N+ ++ L L  N +  +G T
Sbjct: 76  DGAAALAGAVAGSSTLEVLVLTDNYLGEAGALALADALRANTSVKELHLKGNEMGDAGVT 135

Query: 293 SLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR--- 348
           ++ EAL+  +  I  L L  N     GA  L + L   +SL+ELH++ N IGDEG+    
Sbjct: 136 AICEALMSRACDITFLDLGNNSITEAGATHLNRLLFQKRSLKELHMYMNDIGDEGVGKGV 195

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINL-YMNDIGDEGAEK 406
           A+++G     G L+ L++G N +  +G   + +  K     L  + L +    G +GA  
Sbjct: 196 AVLAGALRNHGALSSLELGYNPLGPEGTKTITDLAKFQLPKLTTLKLGWCKVAGGDGARA 255

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLK--DNSVITSLDLAYNPIGADGAKALS 464
           ++D L  N ++T +DL GN++ + GA  ++R LK  +NS +  LDL YN I  DGA AL+
Sbjct: 256 LSDLLLLNASLTHLDLRGNSLGNDGAILLSRGLKAAENSKLADLDLGYNEIKDDGACALA 315

Query: 465 EVLK 468
           + LK
Sbjct: 316 QALK 319


>gi|345802365|ref|XP_547153.3| PREDICTED: protein NLRC3 [Canis lupus familiaris]
          Length = 1068

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/465 (33%), Positives = 231/465 (49%), Gaps = 37/465 (7%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 628  SRSVLQSLLPQLLYCRSLRLDNNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 687

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L  L+L  N IG +G K L D L  N  +  L L S ++RD GA+++AE
Sbjct: 688  ALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNEIRDNGARSMAE 747

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N +   G   +AE L +N +++ L  + N  G  GA ALAK L  
Sbjct: 748  ALATNRTLSVLHLQKNTVGPVGAQLMAETLKQNRSLKELIFSSNSIGDGGAEALAKALRV 807

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L  L++  NSIS +GA  +A  +++  +
Sbjct: 808  NQGLENLDLQSNSISDTGVAALMGALCANQA-LTSLNLRENSISPEGARELARALRSNST 866

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++N+ +T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 867  LKNLDLTANLLHDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSL 926

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + D L  N T+ ILDLR 
Sbjct: 927  DLQENAIGDEGASAVASALKTNATLTALYLQAASIGARGAQALGDALAVNGTLEILDLRG 986

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +                                 + GAK LA + K VN +L  ++L 
Sbjct: 987  NAI--------------------------------GVAGAKALANALK-VNSSLRRLNLQ 1013

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             N +  DGA  +A AL  N    +  +NL  N + + G   +++A
Sbjct: 1014 ENSLGMDGAICVATALSGNH--GLQHINLQGNHIGESGARMISEA 1056



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 163/337 (48%), Gaps = 29/337 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  S + +     G  G   +AE+L  N++ +E+ F++N I   G +A    L+ N  L+
Sbjct: 753  RTLSVLHLQKNTVGPVGAQLMAETLKQNRSLKELIFSSNSIGDGGAEALAKALRVNQGLE 812

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N I D GV  L   L  N  +  L L    +  EGA+ +A  L++NS L+ L+L
Sbjct: 813  NLDLQSNSISDTGVAALMGALCANQALTSLNLRENSISPEGARELARALRSNSTLKNLDL 872

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N++   G  ++A A+ EN  + SLHL  N+  A  A AL + L+ N+SL  L L  N+
Sbjct: 873  TANLLHDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENA 932

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            IGDEG  A                             VA  +K   +L  + L    IG 
Sbjct: 933  IGDEGASA-----------------------------VASALKTNATLTALYLQAASIGA 963

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + DAL  N T+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 964  RGAQALGDALAVNGTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1023

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  +  + L    IG SGA  +++ ++ N
Sbjct: 1024 CVATALSGNHGLQHINLQGNHIGESGARMISEAIKTN 1060



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 158/299 (52%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + E  K+ R+   +  S  + GD G   LA++L  NQ  E +   +N I+  G+ A  
Sbjct: 771  QLMAETLKQNRSLKELIFSSNSIGDGGAEALAKALRVNQGLENLDLQSNSISDTGVAALM 830

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N AL +LNL  N I  EG + L   L  N+ ++ L L++  L D+GA+AIA  ++
Sbjct: 831  GALCANQALTSLNLRENSISPEGARELARALRSNSTLKNLDLTANLLHDQGAQAIAVAMR 890

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA+A+A  L+ N +
Sbjct: 891  ENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKTNAT 950

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G +AL   L+   G L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 951  LTALYLQAASIGARGAQALGDALAV-NGTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1009

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL  N  +  I+L GN+I   GA  I+  +K N+   ++++
Sbjct: 1010 LNLQENSLGMDGAICVATALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPSCTVEM 1068



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 150/286 (52%), Gaps = 11/286 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 643 RSLRLDNNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTAL 702

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+  + L  N I   GA ++A  L  N  ++ L L  
Sbjct: 703 DLRSNSIGPQGAKALADALKINRTLAFLSLQSNEIRDNGARSMAEALATNRTLSVLHLQK 762

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N +G  GA+ ++E LK + ++  L      IG  GAE +A  LR N  +  LDL++N + 
Sbjct: 763 NTVGPVGAQLMAETLKQNRSLKELIFSSNSIGDGGAEALAKALRVNQGLENLDLQSNSIS 822

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + +   +L  N +  +GA+ LA++ +  N  L ++DL  N
Sbjct: 823 D------TGVAALMGALCANQALTSLNLRENSISPEGARELARALRS-NSTLKNLDLTAN 875

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            + D GA AIA A++ N+  A+TSL+L  NF+      AL  A  L
Sbjct: 876 LLHDQGAQAIAVAMRENQ--ALTSLHLQWNFIQAGAAKALGQALQL 919


>gi|194219286|ref|XP_001499317.2| PREDICTED: protein NLRC3 [Equus caballus]
          Length = 1063

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/465 (33%), Positives = 233/465 (50%), Gaps = 37/465 (7%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 623  SQGVLQSLLPQLLYCRSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 682

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA++IAE
Sbjct: 683  ALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNTIRDDGARSIAE 742

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 743  ALGTNRTLSVLHLQKNTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKV 802

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  +A  +    +
Sbjct: 803  NQGLENLDLQSNSISDAGVAALMGALCTNQTLLS-LNLRENSISPEGAQDLAHALCTNST 861

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + DEGA+ IA A+++NR +T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 862  LKNLDLTANLLHDEGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSL 921

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 922  DLQENAIGDEGASAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 981

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +                                 + GAK LA + K VN +L  ++L 
Sbjct: 982  NTI--------------------------------GVAGAKALANALK-VNSSLRRLNLQ 1008

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             N +  DGA  +A AL  N    +  +NL  N + + G   +++A
Sbjct: 1009 ENSLGMDGAICVATALSGNH--GLQHINLQGNHIGESGARMISEA 1051



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 167/337 (49%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G   +AE+LG N+T   +    N I   G +     L+ N +LK
Sbjct: 720  RTLASLSLQSNTIRDDGARSIAEALGTNRTLSVLHLQKNTIGPVGTQRMADALKQNKSLK 779

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N +GD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 780  ELMFSSNSMGDGGAKALAEALKVNQGLENLDLQSNSISDAGVAALMGALCTNQTLLSLNL 839

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 840  RENSISPEGAQDLAHALCTNSTLKNLDLTANLLHDEGAQAIAVAVRENRALTSLHLQWNF 899

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 900  IQAGAAKALGQALQLNR-SLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGA 958

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 959  PGAQALGEALAVNRTLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1018

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  +  + L    IG SGA  +++ ++ N
Sbjct: 1019 CVATALSGNHGLQHINLQGNHIGESGARMISEAIKTN 1055



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 166/317 (52%), Gaps = 1/317 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  S + +     G  G   +A++L  N++ +E+ F++N +   G KA    L+ N  L+
Sbjct: 748  RTLSVLHLQKNTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKVNQGLE 807

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N I D GV  L   L  N  +  L L    +  EGA+ +A  L  NS L+ L+L
Sbjct: 808  NLDLQSNSISDAGVAALMGALCTNQTLLSLNLRENSISPEGAQDLAHALCTNSTLKNLDL 867

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N++   G  ++A A+ EN  + SLHL  N+  A  A AL + L+ N+SL  L L  N+
Sbjct: 868  TANLLHDEGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENA 927

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            IGDEG  A+ S L +    L  L +   SI A GA  + E +   ++L  ++L  N IG 
Sbjct: 928  IGDEGASAVASALKANTA-LTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIGV 986

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ +A+ALK N ++  ++L  N++   GA  +A  L  N  +  ++L  N IG  GA+
Sbjct: 987  AGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHINLQGNHIGESGAR 1046

Query: 462  ALSEVLKFHGNINTLKL 478
             +SE +K +    T+++
Sbjct: 1047 MISEAIKTNAPSCTVEM 1063



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 150/286 (52%), Gaps = 11/286 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 638 RSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTTL 697

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+ ++ L  N I   GA +IA  L  N  ++ L L  
Sbjct: 698 DLRSNSIGPQGAKALADALKINRTLASLSLQSNTIRDDGARSIAEALGTNRTLSVLHLQK 757

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  G + +++ LK + ++  L      +G  GA+ +A+ L+ N  +  LDL++N + 
Sbjct: 758 NTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKVNQGLENLDLQSNSIS 817

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + +L  +L  N +  +GA+ LA +    N  L ++DL  N
Sbjct: 818 DA------GVAALMGALCTNQTLLSLNLRENSISPEGAQDLAHAL-CTNSTLKNLDLTAN 870

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            + D+GA AIA A++ N   A+TSL+L  NF+      AL  A  L
Sbjct: 871 LLHDEGAQAIAVAVRENR--ALTSLHLQWNFIQAGAAKALGQALQL 914


>gi|395835837|ref|XP_003790878.1| PREDICTED: protein NLRC3 [Otolemur garnettii]
          Length = 1065

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 155/441 (35%), Positives = 229/441 (51%), Gaps = 11/441 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S   L     +L    S+ +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SPGVLQSLLPQLLYCQSLRLDTNQFQDPVMDLLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINHTLISLSLQSNTIRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L VL L  N I   G   +A+AL +N  ++ L L+ N  G  G  ALA+ ++ 
Sbjct: 745  ALASNRTLSVLHLQKNTIGPMGAQRMADALKQNKNLKELMLSSNSIGDGGTKALAEAMKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+SL  L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  VA  +    +
Sbjct: 805  NQSLESLDLQSNSISDVGVAALMGALCTNQTLLS-LNLRENSISPEGAQAVAHALCTNST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NR +T++ L  N I +  A  + + L+ N  +TSL
Sbjct: 864  LRNLDLTANLLHDQGAQAIAAAVRENRALTSLHLQWNFIQASAAKVLGQALQLNRNLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDEGASAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     SA+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 984  NAI------GVAGAKALASALKVNSSLRRLNLQENSLGMDGAICVATALS-GNHRLQHIN 1036

Query: 567  LAFNEIRDDGAFAIAQALKAN 587
            L  N I + GA  I++A+K N
Sbjct: 1037 LQGNHIGESGARMISEAIKTN 1057



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 193/383 (50%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINHTLISL 727

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ NK+L+EL L  
Sbjct: 728  SLQSNTIRDDGARSMAEALASNRTLSVLHLQKNTIGPMGAQRMADALKQNKNLKELMLSS 787

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   +   +  L  LD+ +NSIS  G   +   +   ++LL +NL  N I
Sbjct: 788  NSIGDGGTKALAEAMKVNQ-SLESLDLQSNSISDVGVAALMGALCTNQTLLSLNLRENSI 846

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ +A AL  N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  
Sbjct: 847  SPEGAQAVAHALCTNSTLRNLDLTANLLHDQGAQAIAAAVRENRALTSLHLQWNFIQASA 906

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            AK L + L+ + N+ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 907  AKVLGQALQLNRNLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGAP----- 961

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
                                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 962  ---------------------------GAQALGEAL-AVNRTLEILDLRGNAIGVAGAKA 993

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 994  LASALKVNS--SLRRLNLQENSL 1014



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 114/340 (33%), Positives = 173/340 (50%), Gaps = 40/340 (11%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           ++ + L  N I   G  +LA +LL N ++ +L L  N  G  GA ALA  L+ N +L  L
Sbjct: 668 IQKISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINHTLISL 727

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N+I D+G R++   L+S +  L+VL +  N+I   GA  +A+ +K  K+L  + L 
Sbjct: 728 SLQSNTIRDDGARSMAEALASNR-TLSVLHLQKNTIGPMGAQRMADALKQNKNLKELMLS 786

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD G + +A+A+K N+++ ++DL  N+I   G +A+   L  N  + SL+L  N I
Sbjct: 787 SNSIGDGGTKALAEAMKVNQSLESLDLQSNSISDVGVAALMGALCTNQTLLSLNLRENSI 846

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
             +GA+A                            VA  L  N+T+  LDL AN L D+ 
Sbjct: 847 SPEGAQA----------------------------VAHALCTNSTLRNLDLTANLLHDQ- 877

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIR 573
                G     +A+   + +    L  N++Q   AK L Q+ ++ N  LTS+DL  N I 
Sbjct: 878 -----GAQAIAAAVRENRALTSLHLQWNFIQASAAKVLGQALQL-NRNLTSLDLQENAIG 931

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D+GA A+A ALKAN   A+T+L L    +   G  AL +A
Sbjct: 932 DEGASAVASALKAN--TALTALYLQVASIGAPGAQALGEA 969



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 149/286 (52%), Gaps = 11/286 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 640 QSLRLDTNQFQDPVMDLLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTTL 699

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK N T+ ++ L  N I   GA ++A  L  N  ++ L L  
Sbjct: 700 DLRSNSIGPQGAKALADALKINHTLISLSLQSNTIRDDGARSMAEALASNRTLSVLHLQK 759

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + N+  L L    IG  G + +A+ ++ N ++  LDL++N + 
Sbjct: 760 NTIGPMGAQRMADALKQNKNLKELMLSSNSIGDGGTKALAEAMKVNQSLESLDLQSNSIS 819

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + +L  +L  N +  +GA+ +A +    N  L ++DL  N
Sbjct: 820 DV------GVAALMGALCTNQTLLSLNLRENSISPEGAQAVAHAL-CTNSTLRNLDLTAN 872

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            + D GA AIA A++ N   A+TSL+L  NF+       L  A  L
Sbjct: 873 LLHDQGAQAIAAAVRENR--ALTSLHLQWNFIQASAAKVLGQALQL 916


>gi|431906605|gb|ELK10726.1| Protein NLRC3 [Pteropus alecto]
          Length = 1104

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 154/452 (34%), Positives = 233/452 (51%), Gaps = 11/452 (2%)

Query: 147  FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAA 205
             R S+  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  
Sbjct: 661  LRLSQGVLQSLLPQLLYCRSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNK 720

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
            G KA    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+G+++
Sbjct: 721  GAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGSRS 780

Query: 266  IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
            IAE L  N  L VL L  N I  +G   +A+AL +N +++ L  + N  G  GA ALA+ 
Sbjct: 781  IAEALAANRTLSVLHLQKNTIGPTGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEA 840

Query: 326  LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            L+ N+ L+ L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA H+A  +  
Sbjct: 841  LKVNQGLQSLDLQSNSISDTGVAALMGALCANRTLLS-LNLRENSISPEGAQHLARALCT 899

Query: 386  CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              +L  ++L  N + D+GA+ IA A+++N  +T++ L  N I +  A A+ + L+ N  +
Sbjct: 900  NSTLKNLDLTANLLHDQGAQAIAVAVRENHALTSLHLQWNFIQAGAAKALGQALQFNRSL 959

Query: 446  TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            TSLDL  N IG +G  A++  LK +  +  L L    IGA GA+ + + L  N T+ ILD
Sbjct: 960  TSLDLQENAIGDEGVCAVANALKANTALTALYLQVTSIGAPGAQALGEALSVNRTLEILD 1019

Query: 506  LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALT 563
            LR N +      G  G     +A+     +   +L  N L   GA C+A +    N  L 
Sbjct: 1020 LRGNTI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALS-GNHGLQ 1072

Query: 564  SIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
             I+L  N I + GA  I++A+K N  +    +
Sbjct: 1073 HINLQGNHIGESGARMISEAIKTNAPLCTVEM 1104



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 170/340 (50%), Gaps = 13/340 (3%)

Query: 277  RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 679  RSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTTL 738

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  NSIG +G +AL   L   +  LA L + +N I   G+  +AE +   ++L  ++L 
Sbjct: 739  DLRSNSIGPQGAKALADALKINR-TLASLSLQSNRIRDDGSRSIAEALAANRTLSVLHLQ 797

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IG  GA+++ADALKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 798  KNTIGPTGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLQSLDLQSNSI 857

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
               G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL AN L D+ 
Sbjct: 858  SDTGVAALMGALCANRTLLSLNLRENSISPEGAQHLARALCTNSTLKNLDLTANLLHDQ- 916

Query: 516  CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIR 573
                 G      A+     +    L  N++Q   AK L Q+ +  N +LTS+DL  N I 
Sbjct: 917  -----GAQAIAVAVRENHALTSLHLQWNFIQAGAAKALGQALQF-NRSLTSLDLQENAIG 970

Query: 574  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            D+G  A+A ALKAN   A+T+L L    +   G  AL +A
Sbjct: 971  DEGVCAVANALKAN--TALTALYLQVTSIGAPGAQALGEA 1008


>gi|348583996|ref|XP_003477758.1| PREDICTED: protein NLRC3-like [Cavia porcellus]
          Length = 1065

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 153/446 (34%), Positives = 231/446 (51%), Gaps = 11/446 (2%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
             L     +L    S+ +    F D  +  L+  L       +++S A N I+  G KA  
Sbjct: 628  VLQSLLPQLLYCQSLRLDTNQFQDPVMELLSSVLSRKDCRIQKISLAENQISNKGAKALA 687

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N +L TL+L  N IG +G K L D L  N  +  L L S  ++D+GA+++AE L 
Sbjct: 688  RSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNAIKDDGARSVAEALA 747

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N +L VL L  N+I   G   +AEAL +N +++ L L+ N  G  GA ALA+ L+ N++
Sbjct: 748  VNQMLSVLHLQKNVIGPRGAQQMAEALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQA 807

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  +A+ + +  +L  
Sbjct: 808  LLNLDLQSNSISDMGVAALMGALCANQTLLS-LNLRENSISPEGAQALAQALGSNSTLKH 866

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + D+GA+ IA A+ +N T+ ++ L  N I    A A+ + L+ NS +TSLDL 
Sbjct: 867  LDLTANLLHDQGAQAIAVAVGENHTLQSLHLQWNFIQVGAARALGQALQLNSSLTSLDLQ 926

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N IG +GA AL+  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR N +
Sbjct: 927  ENAIGDEGASALASALKVNTALTALYLQVASIGSPGAQVLGEALAVNRTLEILDLRGNAI 986

Query: 512  RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAF 569
                  G  G     +A+     +   SL  N L   G  C+A +    N  L  I+L  
Sbjct: 987  ------GVAGAKALANALKVNSSLRRLSLQENSLGMDGVICVATALS-GNHGLQHINLQG 1039

Query: 570  NEIRDDGAFAIAQALKANEDVAVTSL 595
            N I + GA  I+ A+K N  +    +
Sbjct: 1040 NRIGESGARMISDAIKTNAPMCTVEM 1065



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 156/299 (52%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + E  K+ R+   + +S  + GD G   LAE+L  NQ    +   +N I+  G+ A  
Sbjct: 768  QQMAEALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQALLNLDLQSNSISDMGVAALM 827

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N  L +LNL  N I  EG + L   L  N+ ++ L L++  L D+GA+AIA  + 
Sbjct: 828  GALCANQTLLSLNLRENSISPEGAQALAQALGSNSTLKHLDLTANLLHDQGAQAIAVAVG 887

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L+ L L  N I      +L +AL  NS++ SL L  N  G  GA+ALA  L+ N +
Sbjct: 888  ENHTLQSLHLQWNFIQVGAARALGQALQLNSSLTSLDLQENAIGDEGASALASALKVNTA 947

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G + L   L+  +  L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 948  LTALYLQVASIGSPGAQVLGEALAVNR-TLEILDLRGNAIGVAGAKALANALKVNSSLRR 1006

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N +G +G   +A AL  N  +  I+L GN I   GA  I+  +K N+ + ++++
Sbjct: 1007 LSLQENSLGMDGVICVATALSGNHGLQHINLQGNRIGESGARMISDAIKTNAPMCTVEM 1065



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 188/368 (51%), Gaps = 41/368 (11%)

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + L+L +   +D   + ++ +L + +  ++ + L  N I   G  +LA +LL N ++ +L
Sbjct: 640 QSLRLDTNQFQDPVMELLSSVLSRKDCRIQKISLAENQISNKGAKALARSLLVNRSLTTL 699

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  G  GA ALA  L+ N++L  L L  N+I D+G R++   L+  +  L+VL + 
Sbjct: 700 DLRSNSIGPQGAKALADALKINRTLTSLSLQSNAIKDDGARSVAEALAVNQ-MLSVLHLQ 758

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N I  +GA  +AE +K  +SL  + L  N IGD GA+ +A+ALK N+ +  +DL  N+I
Sbjct: 759 KNVIGPRGAQQMAEALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQALLNLDLQSNSI 818

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              G +A+   L  N  + SL+L  N I  +GA+AL++ L                    
Sbjct: 819 SDMGVAALMGALCANQTLLSLNLRENSISPEGAQALAQALG------------------- 859

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ- 546
                     N+T+  LDL AN L D+   G   ++      ++L+ +    L  N++Q 
Sbjct: 860 ---------SNSTLKHLDLTANLLHDQ---GAQAIAVAVGENHTLQSL---HLQWNFIQV 904

Query: 547 -GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
             A+ L Q+ ++ N +LTS+DL  N I D+GA A+A ALK N   A+T+L L    +   
Sbjct: 905 GAARALGQALQL-NSSLTSLDLQENAIGDEGASALASALKVN--TALTALYLQVASIGSP 961

Query: 606 GQSALTDA 613
           G   L +A
Sbjct: 962 GAQVLGEA 969



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 151/286 (52%), Gaps = 11/286 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 640 QSLRLDTNQFQDPVMELLSSVLSRKDCRIQKISLAENQISNKGAKALARSLLVNRSLTTL 699

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L  N I   GA ++A  L  N +++ L L  
Sbjct: 700 DLRSNSIGPQGAKALADALKINRTLTSLSLQSNAIKDDGARSVAEALAVNQMLSVLHLQK 759

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ ++E LK + ++  L L    IG  GA+ +A+ L+ N  +  LDL++N + 
Sbjct: 760 NVIGPRGAQQMAEALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQALLNLDLQSNSIS 819

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + +L  +L  N +  +GA+ LAQ+    N  L  +DL  N
Sbjct: 820 D------MGVAALMGALCANQTLLSLNLRENSISPEGAQALAQALG-SNSTLKHLDLTAN 872

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            + D GA AIA A+   E+  + SL+L  NF+      AL  A  L
Sbjct: 873 LLHDQGAQAIAVAV--GENHTLQSLHLQWNFIQVGAARALGQALQL 916



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 95/202 (47%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D+G   +A ++G N T + +    N I     +
Sbjct: 849  EGAQALAQALGSNSTLKHLDLTANLLHDQGAQAIAVAVGENHTLQSLHLQWNFIQVGAAR 908

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N +L +L+L  N IGDEG   L   L  N  +  L L    +   GA+ + E
Sbjct: 909  ALGQALQLNSSLTSLDLQENAIGDEGASALASALKVNTALTALYLQVASIGSPGAQVLGE 968

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N I  +G  +LA AL  NS++R L L  N  G  G   +A  L G
Sbjct: 969  ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLSLQENSLGMDGVICVATALSG 1028

Query: 329  NKSLRELHLHGNSIGDEGIRAL 350
            N  L+ ++L GN IG+ G R +
Sbjct: 1029 NHGLQHINLQGNRIGESGARMI 1050


>gi|390471247|ref|XP_003734453.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Callithrix jacchus]
          Length = 1187

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/464 (32%), Positives = 233/464 (50%), Gaps = 37/464 (7%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 747  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 806

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    ++D+GA+++AE
Sbjct: 807  ALARSLLVNRSLTSLDLRGNSIGPQGAKGLADALKINRTLTSLSLQGNTIKDDGARSMAE 866

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L VL L  N I  +G   +A+AL +N +++ L L+ N  G  GA ALA+ L+G
Sbjct: 867  ALASNRTLSVLHLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGGAKALAEALKG 926

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 927  NQGLESLDLQSNSISDTGVAALMGALCTNQALLS-LSLRENSISPEGAKAIARALRANST 985

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ +A A+++NR +T++ L  N I +  A  + + L+ N  +TSL
Sbjct: 986  LKNLDLTANLLHDQGAQAVAGAVRENRALTSLHLQWNFIQAGAAQVLGQALQLNRSLTSL 1045

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +G  A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 1046 DLQENDIGDEGVCAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 1105

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +                                 + GAK LA + K VN +L  ++L 
Sbjct: 1106 NAI--------------------------------GVAGAKALANALK-VNSSLRRLNLQ 1132

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N +  DGA  IA AL  N    +  +NL  N +   G   +++
Sbjct: 1133 ENSLGMDGAIFIATALSGNHR--LQHINLQGNHIGDSGARMISE 1174


>gi|320170161|gb|EFW47060.1| hypothetical protein CAOG_05004 [Capsaspora owczarzaki ATCC 30864]
          Length = 1342

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/434 (34%), Positives = 230/434 (52%), Gaps = 30/434 (6%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           +  GD+    +AE+L  N T  ++  + + I   G +A    L+ N  L  L+L GN IG
Sbjct: 8   QKIGDDEAQAIAEALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLHLHGNQIG 67

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           D G + L + L  N  + +L L    +   GA+AIAE LK N+ L  L L  N I + G 
Sbjct: 68  DAGTQALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGA 127

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++AEAL  N T+  ++L+ N  G  GA A+A+ L+ N +L +L L  N IGD G +A+ 
Sbjct: 128 QAIAEALKVNPTLTQVNLHSNRVGDAGAQAIAEALKVNTTLTQLDLFSNEIGDAGAQAIA 187

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             +      L  LD+ +N I   GA  +AE +K   +L  + L  N IGD GA+ IA+AL
Sbjct: 188 DAVKG-NTTLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEAL 246

Query: 412 KQNRTITTIDLGGNNIHS---KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           K N T+T ++L  N I+     GA AIA VLK N+ +T LDL  N +G  GA+A++E LK
Sbjct: 247 KINTTLTQLELFNNQINQVGDVGAQAIAEVLKVNTTLTQLDLRGNQVGDVGAQAIAEALK 306

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
            +  +  L LGW ++G +GA+ +AD L+ N  +  L                      S 
Sbjct: 307 VNTALIQLDLGWNKVGDAGAQAIADALKGNTALIQL-------------------VSTSE 347

Query: 529 IYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
            Y L      S+  N +   GA+ ++++  + N  L +++L  N+I+D GA +I++AL+ 
Sbjct: 348 EYDLAKP--QSVDSNRVGDAGARSVSEAL-LKNTTLQNLNLWLNQIKDAGARSISEALQK 404

Query: 587 NEDVAVTSLNLANN 600
           N    + +LNLA N
Sbjct: 405 N--TTLQNLNLAEN 416



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 189/357 (52%), Gaps = 17/357 (4%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G   GD G   LAE+L  N T  ++    N I   G +A    L+ N AL  L+L  N
Sbjct: 61  LHGNQIGDAGTQALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRN 120

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG  G + + + L  N  + ++ L S  + D GA+AIAE LK N+ L  L+L +N I  
Sbjct: 121 QIGHVGAQAIAEALKVNPTLTQVNLHSNRVGDAGAQAIAEALKVNTTLTQLDLFSNEIGD 180

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++A+A+  N+T+  L L+ N    +GA A+A+ L+ N +L +L+L  N IGD G +
Sbjct: 181 AGAQAIADAVKGNTTLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQ 240

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISA---KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           A+   L      L  L++ NN I+     GA  +AE +K   +L  ++L  N +GD GA+
Sbjct: 241 AIAEALKI-NTTLTQLELFNNQINQVGDVGAQAIAEVLKVNTTLTQLDLRGNQVGDVGAQ 299

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL-------DLAY------ 452
            IA+ALK N  +  +DLG N +   GA AIA  LK N+ +  L       DLA       
Sbjct: 300 AIAEALKVNTALIQLDLGWNKVGDAGAQAIADALKGNTALIQLVSTSEEYDLAKPQSVDS 359

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           N +G  GA+++SE L  +  +  L L   QI  +GA  +++ L+ N T+  L+L  N
Sbjct: 360 NRVGDAGARSVSEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAEN 416



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 185/375 (49%), Gaps = 17/375 (4%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E  K     + + +     G  G   +AE+L  N    ++    N I   G +A  
Sbjct: 72  QALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGAQAIA 131

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  +NL  N +GD G + + + L  N  + +L L S ++ D GA+AIA+ +K
Sbjct: 132 EALKVNPTLTQVNLHSNRVGDAGAQAIAEALKVNTTLTQLDLFSNEIGDAGAQAIADAVK 191

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L+L++N ID  G  ++AEAL  N+T+  L+L  N  G +GA A+A+ L+ N +
Sbjct: 192 GNTTLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEALKINTT 251

Query: 332 LRELHLHGNSI---GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           L +L L  N I   GD G +A+   L      L  LD+  N +   GA  +AE +K   +
Sbjct: 252 LTQLELFNNQINQVGDVGAQAIAEVLKV-NTTLTQLDLRGNQVGDVGAQAIAEALKVNTA 310

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTI-------DLG------GNNIHSKGASAI 435
           L+ ++L  N +GD GA+ IADALK N  +  +       DL        N +   GA ++
Sbjct: 311 LIQLDLGWNKVGDAGAQAIADALKGNTALIQLVSTSEEYDLAKPQSVDSNRVGDAGARSV 370

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           +  L  N+ + +L+L  N I   GA+++SE L+ +  +  L L   +IG      +   +
Sbjct: 371 SEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRIGYVEETVLRHSI 430

Query: 496 RYNNTISILDLRANG 510
                + I D R +G
Sbjct: 431 HPTLQLHIADQRRSG 445



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 120/226 (53%), Gaps = 11/226 (4%)

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           +W       IGD+ A+ IA+ALK N T+T +DL  + I   GA AIA  LK N+ +  L 
Sbjct: 1   MWRQFEFQKIGDDEAQAIAEALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLH 60

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  G +AL+E LK +  +  L L   QIG  GA+ +A+ L+ N  +  L L+ N
Sbjct: 61  LHGNQIGDAGTQALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRN 120

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDL 567
            +      G  G      A+     +   +L  N +   GA+ +A++ K VN  LT +DL
Sbjct: 121 QI------GHVGAQAIAEALKVNPTLTQVNLHSNRVGDAGAQAIAEALK-VNTTLTQLDL 173

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             NEI D GA AIA A+K N    +T L+L++N + + G  A+ +A
Sbjct: 174 FSNEIGDAGAQAIADAVKGN--TTLTQLDLSSNKIDRVGAQAIAEA 217



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 125/289 (43%), Gaps = 41/289 (14%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L  F+ ++     Q + +  K     + +D+S       G   +AE+L  N T  ++   
Sbjct: 171 LDLFSNEIGDAGAQAIADAVKGNTTLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQ 230

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A    L+ N  L  L L  N I   G                        
Sbjct: 231 RNQIGDVGAQAIAEALKINTTLTQLELFNNQINQVG------------------------ 266

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            D GA+AIAE+LK N+ L  L+L  N +   G  ++AEAL  N+ +  L L  N  G  G
Sbjct: 267 -DVGAQAIAEVLKVNTTLTQLDLRGNQVGDVGAQAIAEALKVNTALIQLDLGWNKVGDAG 325

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A  L+GN +L +L     S  +E   A    + S            N +   GA  
Sbjct: 326 AQAIADALKGNTALIQL----VSTSEEYDLAKPQSVDS------------NRVGDAGARS 369

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           V+E +    +L  +NL++N I D GA  I++AL++N T+  ++L  N I
Sbjct: 370 VSEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRI 418



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 16/217 (7%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           + K+ R   Q + E  K     + + +     GD G   +AE+L  N T  ++    N I
Sbjct: 203 SNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEALKINTTLTQLELFNNQI 262

Query: 203 TAAG---IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
              G    +A   VL+ N  L  L+L GN +GD G + + + L  N  + +L L    + 
Sbjct: 263 NQVGDVGAQAIAEVLKVNTTLTQLDLRGNQVGDVGAQAIAEALKVNTALIQLDLGWNKVG 322

Query: 260 DEGAKAIAELLKNNSILRVL-------------ELNNNMIDYSGFTSLAEALLENSTIRS 306
           D GA+AIA+ LK N+ L  L              +++N +  +G  S++EALL+N+T+++
Sbjct: 323 DAGAQAIADALKGNTALIQLVSTSEEYDLAKPQSVDSNRVGDAGARSVSEALLKNTTLQN 382

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           L+L  N     GA ++++ L+ N +L+ L+L  N IG
Sbjct: 383 LNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRIG 419


>gi|397488253|ref|XP_003815183.1| PREDICTED: protein NLRC3 isoform 2 [Pan paniscus]
          Length = 1112

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/449 (34%), Positives = 233/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 672  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 731

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 732  ALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAE 791

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ 
Sbjct: 792  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKV 851

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 852  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALRANST 910

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 911  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 970

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 971  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 1030

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 1031 NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHIN 1083

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1084 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1112



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 196/383 (51%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L    +  +G+KA+A+ LK N  L  L
Sbjct: 715  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSL 774

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL L  
Sbjct: 775  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 834

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N I
Sbjct: 835  NSIGDGGAKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSI 893

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ IA AL+ N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  
Sbjct: 894  SPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGA 953

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A+AL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 954  AQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASI-------- 1005

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             G S                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 1006 -GAS-----------------------GAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKA 1040

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 1041 LANALKVNS--SLRRLNLQENSL 1061



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 170/339 (50%), Gaps = 11/339 (3%)

Query: 277  RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 687  RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 746

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 747  DLRGNSIGPQGSKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQ 805

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IG  GA+++ADALKQNR++  + L  N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 806  KNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSI 865

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
               G  AL   L  +  + +L L    I   GA+ +A  LR N+T+  LDL AN L D+ 
Sbjct: 866  SDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQ- 924

Query: 516  CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                 G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 925  -----GARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 979

Query: 575  DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            DGA A+A+ALK N   A+T+L L    +   G   L +A
Sbjct: 980  DGACAVARALKVN--TALTALYLQVASIGASGAQVLGEA 1016


>gi|397488251|ref|XP_003815182.1| PREDICTED: protein NLRC3 isoform 1 [Pan paniscus]
          Length = 1065

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/449 (34%), Positives = 233/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ 
Sbjct: 745  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 805  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALRANST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 864  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 984  NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHIN 1036

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1037 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1065



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 196/383 (51%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L    +  +G+KA+A+ LK N  L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSL 727

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL L  
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 787

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N I
Sbjct: 788  NSIGDGGAKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSI 846

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ IA AL+ N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  
Sbjct: 847  SPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGA 906

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A+AL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 907  AQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASI-------- 958

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             G S                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 959  -GAS-----------------------GAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKA 993

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 994  LANALKVNS--SLRRLNLQENSL 1014



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 170/339 (50%), Gaps = 11/339 (3%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 700 DLRGNSIGPQGSKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQ 758

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+++ADALKQNR++  + L  N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 759 KNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSI 818

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I   GA+ +A  LR N+T+  LDL AN L D+ 
Sbjct: 819 SDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQ- 877

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 878 -----GARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 932

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           DGA A+A+ALK N   A+T+L L    +   G   L +A
Sbjct: 933 DGACAVARALKVN--TALTALYLQVASIGASGAQVLGEA 969


>gi|440901436|gb|ELR52378.1| Protein NLRC3 [Bos grunniens mutus]
          Length = 1089

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/439 (34%), Positives = 231/439 (52%), Gaps = 8/439 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S   L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 650  SPGVLQSLLPQLLYCRSLRLDTNQFQDPVMELLGSVLSGKDCHIQRISLAENQISNKGAK 709

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+++AE
Sbjct: 710  ALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARSMAE 769

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L  
Sbjct: 770  ALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMV 829

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L+ L   G   G    RALM  L + +  L+ L++  NSIS +GA  +A  ++   +
Sbjct: 830  NQGLKSLDWQGLDCGARE-RALMGALCTNQTLLS-LNLRENSISPEGAQDLARALRTNST 887

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ +A+A+++NRT+T++ L  N I +  A A+ + L+ N+ +TSL
Sbjct: 888  LKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQLNTSLTSL 947

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 948  DLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 1007

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +  EV +G   L+       SL+ +      +  ++GA C+A +    N  L  I+L 
Sbjct: 1008 NTI--EV-AGAKALANALKVNSSLRRLNLQENSLG-MEGAICVATALS-GNHGLRHINLQ 1062

Query: 569  FNEIRDDGAFAIAQALKAN 587
             N I + GA  I++A+K N
Sbjct: 1063 GNHIGESGARMISEAIKTN 1081



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 190/383 (49%), Gaps = 37/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 693  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 752

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I   G  S+AEAL  N T+  LHL  N  G +G   +A  L+ N+SL+EL    
Sbjct: 753  SLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSS 812

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD       A+    +     N ++LL +NL  N I
Sbjct: 813  NSIGDGGAKALAEALMVNQG-LKSLDWQGLDCGARERALMGALCTN-QTLLSLNLRENSI 870

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ +A AL+ N T+ ++DL  N +H +GA A+A  +++N  +TSL L +N I A  
Sbjct: 871  SPEGAQDLARALRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGA 930

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            AKAL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 931  AKALGQALQLNTSLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAP----- 985

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
                                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 986  ---------------------------GAQALGEAL-AVNRTLEILDLRGNTIEVAGAKA 1017

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 1018 LANALKVNS--SLRRLNLQENSL 1038



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 169/340 (49%), Gaps = 14/340 (4%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 665 RSLRLDTNQFQDPVMELLGSVLSGKDCHIQRISLAENQISNKGAKALARSLLVNRSLTTL 724

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  NSIG +G +AL   L   +  LA L + +N I   GA  +AE +   ++L  ++L 
Sbjct: 725 DLRSNSIGPQGAKALADALKINR-TLASLSLQSNRIRDDGARSMAEALATNRTLSVLHLQ 783

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  G +++ADALKQNR++  +    N+I   GA A+A  L  N  + SLD      
Sbjct: 784 KNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMVNQGLKSLDWQGLDC 843

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           GA   +AL   L  +  + +L L    I   GA+ +A  LR N+T+  LDL AN L D+ 
Sbjct: 844 GAR-ERALMGALCTNQTLLSLNLRENSISPEGAQDLARALRTNSTLKSLDLTANLLHDQ- 901

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIR 573
                G      A+   + +    L  N++Q   AK L Q+ ++ N +LTS+DL  N I 
Sbjct: 902 -----GAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQL-NTSLTSLDLQENAIG 955

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D+GA A+A ALK N    +T+L L    +   G  AL +A
Sbjct: 956 DEGASAVASALKVN--TVLTALYLQVASIGAPGAQALGEA 993



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 65/140 (46%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +S+D+     GDEG   +A +L  N     +      I A G +A    L  N  L+ 
Sbjct: 943  SLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEI 1002

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L GN I   G K L + L  N+ + RL L    L  EGA  +A  L  N  LR + L 
Sbjct: 1003 LDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQ 1062

Query: 283  NNMIDYSGFTSLAEALLENS 302
             N I  SG   ++EA+  N+
Sbjct: 1063 GNHIGESGARMISEAIKTNA 1082


>gi|320170518|gb|EFW47417.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 623

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 158/456 (34%), Positives = 232/456 (50%), Gaps = 14/456 (3%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  R   D     LAE+L  N    ++S   N I  AG  A    L+ N  L  L+L  N
Sbjct: 22  LEAREIDDHDTLGLAEALQVNTKRADLSLGQNQIGCAGAGAIAEALKVNTTLVRLSLDDN 81

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N G+E L L+   +   G +AIAE LK N  L  L+L++N +  
Sbjct: 82  QIGDAGAQAIAEALKVNTGLETLDLNWNRIGAAGTQAIAEALKVNKTLTNLDLSDNQMGD 141

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AE L  N+T+ +L+L  N  G  G   +A+ L+ N  L +L L  N IGD G +
Sbjct: 142 VGAQAIAEGLKVNTTLDTLNLASNTIGEAGV--IAEALKVNTRLTQLRLGENRIGDAGAQ 199

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L      L  L +G+N I   GA  +AE +K   +L  + L  N IGD GA+ IA
Sbjct: 200 AIAEALKVNP-TLRELMLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGAQAIA 258

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +ALK N T+  + LG N I   GA AIA VLK N+ +T L L  N IG  GA+A++E+LK
Sbjct: 259 EALKVNPTLRELVLGSNRIGDAGAQAIAEVLKPNTAMTWLGLGGNQIGPLGAQAIAEMLK 318

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
            +  +  L +   + G  GA  +A+  + N T++ LDLR N L D       G    ++ 
Sbjct: 319 VNKTMKNLYVAGNRFGGDGALAIAEAFKVNTTMTTLDLRDNQLGDAGAMSIAGTLKVNTT 378

Query: 529 IYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           +  +       LC N +   GA+ +A + K VN  LTS+ L  N+I + GA  IA+AL+ 
Sbjct: 379 VTGV------YLCDNQIGSAGAREIALALK-VNTTLTSLGLRANQITETGAQEIAKALRV 431

Query: 587 NEDVAVTSLNLANN--FLTKFGQSALTDAKDLVYEM 620
           N+ +     +L  N    + F + A  D    V+ +
Sbjct: 432 NKKLKYLENDLQMNPRVFSMFPRLATADEVQAVFRL 467



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 134/362 (37%), Positives = 195/362 (53%), Gaps = 9/362 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K      ++D++    G  G   +AE+L  N+T   +  + N +   G +A  
Sbjct: 89  QAIAEALKVNTGLETLDLNWNRIGAAGTQAIAEALKVNKTLTNLDLSDNQMGDVGAQAIA 148

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L TLNL+ N IG+ GV  + + L  N  + +L+L    + D GA+AIAE LK
Sbjct: 149 EGLKVNTTLDTLNLASNTIGEAGV--IAEALKVNTRLTQLRLGENRIGDAGAQAIAEALK 206

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  LR L L +N I  +G  ++AEAL  N T+R L L  N  G  GA A+A+ L+ N +
Sbjct: 207 VNPTLRELMLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGAQAIAEALKVNPT 266

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           LREL L  N IGD G +A+   L      +  L +G N I   GA  +AE +K  K++  
Sbjct: 267 LRELVLGSNRIGDAGAQAIAEVLKPNTA-MTWLGLGGNQIGPLGAQAIAEMLKVNKTMK- 324

Query: 392 INLYM--NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
            NLY+  N  G +GA  IA+A K N T+TT+DL  N +   GA +IA  LK N+ +T + 
Sbjct: 325 -NLYVAGNRFGGDGALAIAEAFKVNTTMTTLDLRDNQLGDAGAMSIAGTLKVNTTVTGVY 383

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL--DLR 507
           L  N IG+ GA+ ++  LK +  + +L L   QI  +GA+ +A  LR N  +  L  DL+
Sbjct: 384 LCDNQIGSAGAREIALALKVNTTLTSLGLRANQITETGAQEIAKALRVNKKLKYLENDLQ 443

Query: 508 AN 509
            N
Sbjct: 444 MN 445



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 140/388 (36%), Positives = 199/388 (51%), Gaps = 14/388 (3%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L L    I D     L + L  N     L L    +   GA AIAE LK N+ L  L 
Sbjct: 18  KELCLEAREIDDHDTLGLAEALQVNTKRADLSLGQNQIGCAGAGAIAEALKVNTTLVRLS 77

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L++N I  +G  ++AEAL  N+ + +L LN N  GA G  A+A+ L+ NK+L  L L  N
Sbjct: 78  LDDNQIGDAGAQAIAEALKVNTGLETLDLNWNRIGAAGTQAIAEALKVNKTLTNLDLSDN 137

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD G +A+  GL      L  L++ +N+I   G   +AE +K    L  + L  N IG
Sbjct: 138 QMGDVGAQAIAEGLKVNT-TLDTLNLASNTIGEAGV--IAEALKVNTRLTQLRLGENRIG 194

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D GA+ IA+ALK N T+  + LG N I   GA AIA  LK N  +  L L  N IG  GA
Sbjct: 195 DAGAQAIAEALKVNPTLRELMLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGA 254

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
           +A++E LK +  +  L LG  +IG +GA+ +A++L+ N  ++ L L  N +      G  
Sbjct: 255 QAIAEALKVNPTLRELVLGSNRIGDAGAQAIAEVLKPNTAMTWLGLGGNQI------GPL 308

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           G       +   K M    +  N     GA  +A++FK VN  +T++DL  N++ D GA 
Sbjct: 309 GAQAIAEMLKVNKTMKNLYVAGNRFGGDGALAIAEAFK-VNTTMTTLDLRDNQLGDAGAM 367

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFG 606
           +IA  LK N    VT + L +N +   G
Sbjct: 368 SIAGTLKVN--TTVTGVYLCDNQIGSAG 393


>gi|119605757|gb|EAW85351.1| NOD3 protein, isoform CRA_d [Homo sapiens]
          Length = 1112

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 155/449 (34%), Positives = 231/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 672  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 731

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 732  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 791

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 792  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 851

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +
Sbjct: 852  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANST 910

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 911  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 970

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 971  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 1030

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 1031 NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHIN 1083

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1084 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1112



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 168/339 (49%), Gaps = 11/339 (3%)

Query: 277  RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 687  RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 746

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 747  DLRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQ 805

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IG  GA+++ADALKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 806  KNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSI 865

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
               G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL AN L D+ 
Sbjct: 866  SDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQ- 924

Query: 516  CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                 G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 925  -----GARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 979

Query: 575  DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            DGA A+A+ALK N   A+T+L L    +   G   L +A
Sbjct: 980  DGACAVARALKVN--TALTALYLQVASIGASGAQVLGEA 1016


>gi|30348948|tpg|DAA01245.1| TPA_inf: NOD3 [Homo sapiens]
          Length = 1112

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/449 (34%), Positives = 231/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 672  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 731

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 732  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 791

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 792  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 851

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +
Sbjct: 852  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANST 910

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 911  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 970

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 971  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 1030

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 1031 NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHIN 1083

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1084 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1112



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 168/339 (49%), Gaps = 11/339 (3%)

Query: 277  RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 687  RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 746

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 747  DLRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQ 805

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IG  GA+++ADALKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 806  KNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSI 865

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
               G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL AN L D+ 
Sbjct: 866  SDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQ- 924

Query: 516  CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                 G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 925  -----GARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 979

Query: 575  DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            DGA A+A+ALK N   A+T+L L    +   G   L +A
Sbjct: 980  DGACAVARALKVN--TALTALYLQVASIGASGAQVLGEA 1016


>gi|355756510|gb|EHH60118.1| hypothetical protein EGM_11416, partial [Macaca fascicularis]
          Length = 1108

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 154/449 (34%), Positives = 232/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 668  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 727

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 728  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 787

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L VL L  N I   G   +A+AL +N +++ L L+ N  G  G+ ALA+ L+ 
Sbjct: 788  ALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKV 847

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +G   +A  +    +
Sbjct: 848  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGGQAIAHALCTNST 906

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 907  LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 966

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 967  DLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 1026

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G +G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 1027 NAI------GVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALS-GNHRLQHIN 1079

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1080 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1108



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 167/339 (49%), Gaps = 11/339 (3%)

Query: 277  RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 683  RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 742

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 743  DLRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSVLHLQ 801

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IG  GA+++ADALKQNR++  + L  N+I   G+ A+A  LK N  + SLDL  N I
Sbjct: 802  KNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSI 861

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
               G  AL   L  +  + +L L    I   G + +A  L  N+T+  LDL AN L D+ 
Sbjct: 862  SDAGVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQ- 920

Query: 516  CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                 G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 921  -----GAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 975

Query: 575  DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            DGA A+A ALK N   A+T+L L    +   G   L +A
Sbjct: 976  DGACAVAHALKVN--TALTALYLQVASIGAPGAQVLGEA 1012


>gi|355709913|gb|EHH31377.1| hypothetical protein EGK_12437, partial [Macaca mulatta]
          Length = 1100

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 154/449 (34%), Positives = 232/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 660  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 719

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 720  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 779

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L VL L  N I   G   +A+AL +N +++ L L+ N  G  G+ ALA+ L+ 
Sbjct: 780  ALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKV 839

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +G   +A  +    +
Sbjct: 840  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGGQAIAHALCTNST 898

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 899  LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 958

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 959  DLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 1018

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G +G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 1019 NAI------GVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALS-GNHRLQHIN 1071

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1072 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1100



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 161/325 (49%), Gaps = 9/325 (2%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 675 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 734

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 735 DLRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSVLHLQ 793

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+++ADALKQNR++  + L  N+I   G+ A+A  LK N  + SLDL  N I
Sbjct: 794 KNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSI 853

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I   G + +A  L  N+T+  LDL AN L D+ 
Sbjct: 854 SDAGVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQ- 912

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 913 -----GAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 967

Query: 575 DGAFAIAQALKANEDVAVTSLNLAN 599
           DGA A+A ALK N  +    L +A+
Sbjct: 968 DGACAVAHALKVNTALTALYLQVAS 992



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 148/272 (54%), Gaps = 11/272 (4%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R+L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 675 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 734

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L  N  ++ L L  
Sbjct: 735 DLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSVLHLQK 794

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L L    IG  G++ +A+ L+ N  +  LDL++N + 
Sbjct: 795 NSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSIS 854

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + +L  SL  N +  +G + +A +    N  L ++DL  N
Sbjct: 855 DA------GVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHAL-CTNSTLKNLDLTAN 907

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            + D GA AIA A++ N    +TSL+L  NF+
Sbjct: 908 LLHDQGAQAIAVAVRENR--TLTSLHLQWNFI 937


>gi|426380992|ref|XP_004057141.1| PREDICTED: protein NLRC3 isoform 2 [Gorilla gorilla gorilla]
          Length = 1112

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 154/449 (34%), Positives = 231/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 672  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 731

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L  N IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 732  ALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 791

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ 
Sbjct: 792  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKV 851

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 852  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALRANST 910

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 911  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 970

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 971  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 1030

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 1031 NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHIN 1083

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1084 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1112



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 195/383 (50%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 715  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSL 774

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL L  
Sbjct: 775  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 834

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N I
Sbjct: 835  NSIGDGGAKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSI 893

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ IA AL+ N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  
Sbjct: 894  SPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGA 953

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A+AL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 954  AQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAP----- 1008

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
                                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 1009 ---------------------------GAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKA 1040

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 1041 LANALKVNS--SLRRLNLQENSL 1061



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 169/339 (49%), Gaps = 11/339 (3%)

Query: 277  RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 687  RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 746

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  NSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 747  DLRSNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQ 805

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IG  GA+++ADALKQNR++  + L  N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 806  KNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSI 865

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
               G  AL   L  +  + +L L    I   GA+ +A  LR N+T+  LDL AN L D+ 
Sbjct: 866  SDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQ- 924

Query: 516  CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                 G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 925  -----GARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 979

Query: 575  DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            DGA A+A+ALK N   A+T+L L    +   G   L +A
Sbjct: 980  DGACAVARALKVN--TALTALYLQVASIGAPGAQVLGEA 1016


>gi|426380990|ref|XP_004057140.1| PREDICTED: protein NLRC3 isoform 1 [Gorilla gorilla gorilla]
          Length = 1065

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 154/449 (34%), Positives = 231/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L  N IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ 
Sbjct: 745  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 805  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALRANST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 864  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 984  NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHIN 1036

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1037 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1065



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 195/383 (50%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSL 727

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL L  
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 787

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N I
Sbjct: 788  NSIGDGGAKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSI 846

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ IA AL+ N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  
Sbjct: 847  SPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGA 906

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A+AL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 907  AQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAP----- 961

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
                                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 962  ---------------------------GAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKA 993

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 994  LANALKVNS--SLRRLNLQENSL 1014



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 164/323 (50%), Gaps = 11/323 (3%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  NSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 700 DLRSNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQ 758

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+++ADALKQNR++  + L  N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 759 KNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSI 818

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I   GA+ +A  LR N+T+  LDL AN L D+ 
Sbjct: 819 SDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQ- 877

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 878 -----GARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 932

Query: 575 DGAFAIAQALKANEDVAVTSLNL 597
           DGA A+A+ALK N   A+T+L L
Sbjct: 933 DGACAVARALKVN--TALTALYL 953



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 150/272 (55%), Gaps = 11/272 (4%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R+L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L  N  ++ L L  
Sbjct: 700 DLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQK 759

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L L    IG  GA+ +A+ L+ N  +  LDL++N + 
Sbjct: 760 NSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 819

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + +L  SL  N +  +GA+ +A + +  N  L ++DL  N
Sbjct: 820 DA------GVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALR-ANSTLKNLDLTAN 872

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            + D GA AIA A++ N    +TSL+L  NF+
Sbjct: 873 LLHDQGARAIAVAVRENR--TLTSLHLQWNFI 902


>gi|118918429|ref|NP_849172.2| protein NLRC3 [Homo sapiens]
 gi|158563940|sp|Q7RTR2.2|NLRC3_HUMAN RecName: Full=Protein NLRC3; AltName: Full=CARD15-like protein;
            AltName: Full=Caterpiller protein 16.2; Short=CLR16.2;
            AltName: Full=Nucleotide-binding oligomerization domain
            protein 3
 gi|54633547|gb|AAT48367.1| caterpiller 16.2 [Homo sapiens]
 gi|119605756|gb|EAW85350.1| NOD3 protein, isoform CRA_c [Homo sapiens]
 gi|227809550|gb|ACP40993.1| NLRC3 [Homo sapiens]
          Length = 1065

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/449 (34%), Positives = 231/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 745  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +
Sbjct: 805  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 864  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 984  NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHIN 1036

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1037 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1065



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 194/383 (50%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L    +  +GAKA+A+ LK N  L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 727

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL    
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSS 787

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N I
Sbjct: 788  NSIGDGGAKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSI 846

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ IA AL  N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  
Sbjct: 847  SPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGA 906

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A+AL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 907  AQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASI-------- 958

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             G S                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 959  -GAS-----------------------GAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKA 993

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 994  LANALKVNS--SLRRLNLQENSL 1014



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 168/339 (49%), Gaps = 11/339 (3%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 700 DLRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQ 758

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+++ADALKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 759 KNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSI 818

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL AN L D+ 
Sbjct: 819 SDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQ- 877

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 878 -----GARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 932

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           DGA A+A+ALK N   A+T+L L    +   G   L +A
Sbjct: 933 DGACAVARALKVN--TALTALYLQVASIGASGAQVLGEA 969


>gi|383411373|gb|AFH28900.1| protein NLRC3 [Macaca mulatta]
 gi|383411375|gb|AFH28901.1| protein NLRC3 [Macaca mulatta]
          Length = 1065

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/449 (34%), Positives = 232/449 (51%), Gaps = 11/449 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  G+ ALA+ L+ 
Sbjct: 745  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +G   +A  +    +
Sbjct: 805  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGGQAIAHALCTNST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 864  LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G +G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 984  NAI------GVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALS-GNHRLQHIN 1036

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1037 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1065



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 161/325 (49%), Gaps = 9/325 (2%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+ N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L 
Sbjct: 700 DLRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQ 758

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+++ADALKQNR++  + L  N+I   G+ A+A  LK N  + SLDL  N I
Sbjct: 759 KNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSI 818

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I   G + +A  L  N+T+  LDL AN L D+ 
Sbjct: 819 SDAGVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQ- 877

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRD 574
                G      A+   + +    L  N++Q     A    +  N +LTS+DL  N I D
Sbjct: 878 -----GAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 932

Query: 575 DGAFAIAQALKANEDVAVTSLNLAN 599
           DGA A+A ALK N  +    L +A+
Sbjct: 933 DGACAVAHALKVNTALTALYLQVAS 957



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 148/272 (54%), Gaps = 11/272 (4%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R+L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L  N  ++ L L  
Sbjct: 700 DLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQK 759

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L L    IG  G++ +A+ L+ N  +  LDL++N + 
Sbjct: 760 NSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSIS 819

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + +L  SL  N +  +G + +A +    N  L ++DL  N
Sbjct: 820 DA------GVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHAL-CTNSTLKNLDLTAN 872

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            + D GA AIA A++ N    +TSL+L  NF+
Sbjct: 873 LLHDQGAQAIAVAVRENR--TLTSLHLQWNFI 902


>gi|326679847|ref|XP_002666753.2| PREDICTED: protein NLRC3-like [Danio rerio]
          Length = 1127

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/462 (31%), Positives = 228/462 (49%), Gaps = 37/462 (8%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            +L     +L   S + M    F +  +  L   L   +   + +S A N I++ G+K   
Sbjct: 690  SLKRLLPQLLYCSKLRMENNEFKEGAMELLGSLLSAKECHIQMLSLADNSISSKGVKPLS 749

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L TL+L GN IG +G K LC+ L  N  +  + L +  + DEGA++++E+L+
Sbjct: 750  RALLVNRTLTTLDLRGNNIGAKGAKTLCEALKLNQFLVSVNLQNNHIEDEGARSLSEVLQ 809

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +N  L  L +  N I   G   +AE L++N T++  +++ N+ G LG  ALA+ L  N  
Sbjct: 810  SNRKLTTLNVQKNGIGPEGMKKIAEGLIKNQTLQDFNVSSNHLGDLGTVALAQALMVNHV 869

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  NS+ D GI+AL   L S +G L  L++  NSI   GA  +A+ +K    L  
Sbjct: 870  LHTLSLQSNSVSDRGIKALSHALQSNRG-LCCLNLRENSIGVAGAKDIAKALKVNTCLRE 928

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + DEG   IA+A++ NR+I+++ L  N + +  A A+A  L  N+ I  LDL 
Sbjct: 929  LDLTANLLHDEGVTAIAEAMRVNRSISSLHLQWNFMKAGAAKALAESLSSNTCIQLLDLQ 988

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N +G +G  AL+  L  + ++  L L     G SGA  +AD +  N T+  LDLR N +
Sbjct: 989  ENALGDNGVIALAAALMSNSSLTVLYLQGVSAGKSGAVALADAMVVNKTLHTLDLRGNSI 1048

Query: 512  RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
                  G  G   F SA+ +                           N +L S++L  N 
Sbjct: 1049 ------GMEGAKAFSSALKN---------------------------NRSLRSLNLQENS 1075

Query: 572  IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +  DGA  IA AL+ N    +T +NL  N + + G   ++DA
Sbjct: 1076 LGMDGAIFIATALRGNHQ--LTYINLQGNGIGESGAKVVSDA 1115



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 175/320 (54%), Gaps = 1/320 (0%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  ++L+E  +  R  +++++     G EG+  +AE L  NQT ++ + ++N +   G  
Sbjct: 799  EGARSLSEVLQSNRKLTTLNVQKNGIGPEGMKKIAEGLIKNQTLQDFNVSSNHLGDLGTV 858

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N  L TL+L  N + D G+K L   L  N G+  L L    +   GAK IA+
Sbjct: 859  ALAQALMVNHVLHTLSLQSNSVSDRGIKALSHALQSNRGLCCLNLRENSIGVAGAKDIAK 918

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             LK N+ LR L+L  N++   G T++AEA+  N +I SLHL  N+  A  A ALA+ L  
Sbjct: 919  ALKVNTCLRELDLTANLLHDEGVTAIAEAMRVNRSISSLHLQWNFMKAGAAKALAESLSS 978

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N  ++ L L  N++GD G+ AL + L S    L VL +   S    GA  +A+ +   K+
Sbjct: 979  NTCIQLLDLQENALGDNGVIALAAALMS-NSSLTVLYLQGVSAGKSGAVALADAMVVNKT 1037

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N IG EGA+  + ALK NR++ +++L  N++   GA  IA  L+ N  +T +
Sbjct: 1038 LHTLDLRGNSIGMEGAKAFSSALKNNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYI 1097

Query: 449  DLAYNPIGADGAKALSEVLK 468
            +L  N IG  GAK +S+ +K
Sbjct: 1098 NLQGNGIGESGAKVVSDAIK 1117



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 179/355 (50%), Gaps = 1/355 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E  K  +   SV++   +  DEG   L+E L  N+    ++   NGI   G+K   
Sbjct: 774  KTLCEALKLNQFLVSVNLQNNHIEDEGARSLSEVLQSNRKLTTLNVQKNGIGPEGMKKIA 833

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L+  N+S N +GD G   L   L+ N  +  L L S  + D G KA++  L+
Sbjct: 834  EGLIKNQTLQDFNVSSNHLGDLGTVALAQALMVNHVLHTLSLQSNSVSDRGIKALSHALQ 893

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +N  L  L L  N I  +G   +A+AL  N+ +R L L  N     G  A+A+ +  N+S
Sbjct: 894  SNRGLCCLNLRENSIGVAGAKDIAKALKVNTCLRELDLTANLLHDEGVTAIAEAMRVNRS 953

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            +  LHL  N +     +AL   LSS    + +LD+  N++   G   +A  + +  SL  
Sbjct: 954  ISSLHLQWNFMKAGAAKALAESLSSNTC-IQLLDLQENALGDNGVIALAAALMSNSSLTV 1012

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            + L     G  GA  +ADA+  N+T+ T+DL GN+I  +GA A +  LK+N  + SL+L 
Sbjct: 1013 LYLQGVSAGKSGAVALADAMVVNKTLHTLDLRGNSIGMEGAKAFSSALKNNRSLRSLNLQ 1072

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             N +G DGA  ++  L+ +  +  + L    IG SGA+ V+D ++      ++D+
Sbjct: 1073 ENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIKAGAPDCVVDI 1127


>gi|432111550|gb|ELK34664.1| Protein NLRC3 [Myotis davidii]
          Length = 1065

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 153/465 (32%), Positives = 231/465 (49%), Gaps = 37/465 (7%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCQSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L  N IG +G K L D L  N  +  L L S  +RD+GAK +AE
Sbjct: 685  ALARSLLVNRSLTSLDLRCNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGAKFMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L V+ L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 745  ALAANRTLSVMHLQKNTIGPMGAQHMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  +A  +    +
Sbjct: 805  NQGLETLDLQSNSISDTGVAALMGALCANRALLS-LNLRENSISPEGAQDLARALCTNST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++N T+ ++ L  N I +  A A+ + L+ N  + SL
Sbjct: 864  LKNLDLTANLLHDQGAQAIAMAVRENHTLMSLHLQWNFIQAGAAKALGQALQFNKSLISL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDEGACAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +         G++                       GAK LA + K VN +L  ++L 
Sbjct: 984  NAI---------GVA-----------------------GAKALANALK-VNSSLRRLNLQ 1010

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             N +  DG   IA AL  N    +  +NL  N + + G   +++A
Sbjct: 1011 ENSLGMDGMICIATALSGNH--GIQHINLQGNHIGESGARMISEA 1053



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 165/337 (48%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G  F+AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 722  RTLASLSLQSNRIRDDGAKFMAEALAANRTLSVMHLQKNTIGPMGAQHMADALKQNRSLK 781

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 782  ELMFSSNSIGDGGAKALAEALKVNQGLETLDLQSNSISDTGVAALMGALCANRALLSLNL 841

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA AL  NST+++L L  N     GA A+A  +  N +L  LHL  N 
Sbjct: 842  RENSISPEGAQDLARALCTNSTLKNLDLTANLLHDQGAQAIAMAVRENHTLMSLHLQWNF 901

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   K  L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 902  IQAGAAKALGQALQFNK-SLISLDLQENAIGDEGACAVASALKANTALTALYLQVASIGA 960

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DG  
Sbjct: 961  PGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGMI 1020

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  I  + L    IG SGA  +++ ++ N
Sbjct: 1021 CIATALSGNHGIQHINLQGNHIGESGARMISEAIKTN 1057



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 156/299 (52%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+   +  S  + GD G   LAE+L  NQ  E +   +N I+  G+ A  
Sbjct: 768  QHMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLETLDLQSNSISDTGVAALM 827

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N AL +LNL  N I  EG + L   L  N+ ++ L L++  L D+GA+AIA  ++
Sbjct: 828  GALCANRALLSLNLRENSISPEGAQDLARALCTNSTLKNLDLTANLLHDQGAQAIAMAVR 887

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA A+A  L+ N +
Sbjct: 888  ENHTLMSLHLQWNFIQAGAAKALGQALQFNKSLISLDLQENAIGDEGACAVASALKANTA 947

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G +AL   L+  +  L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 948  LTALYLQVASIGAPGAQALGEALAVNR-TLEILDLRGNAIGVAGAKALANALKVNSSLRR 1006

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +G   IA AL  N  I  I+L GN+I   GA  I+  +K N+   ++++
Sbjct: 1007 LNLQENSLGMDGMICIATALSGNHGIQHINLQGNHIGESGARMISEAIKTNAPSCTVEM 1065


>gi|18676566|dbj|BAB84935.1| FLJ00180 protein [Homo sapiens]
          Length = 499

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 155/441 (35%), Positives = 230/441 (52%), Gaps = 11/441 (2%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 59  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 118

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 119 ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 178

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L +N  L +L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 179 ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 238

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +
Sbjct: 239 NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANST 297

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 298 LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 357

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 358 DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 417

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
           N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I+
Sbjct: 418 NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHIN 470

Query: 567 LAFNEIRDDGAFAIAQALKAN 587
           L  N I D GA  I++A+K N
Sbjct: 471 LQGNHIGDSGARMISEAIKTN 491



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 194/383 (50%), Gaps = 36/383 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           ++ ++L+ N I ++G K L   L+ N  +  L L    +  +GAKA+A+ LK N  L  L
Sbjct: 102 IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 161

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL    
Sbjct: 162 SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSS 221

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N I
Sbjct: 222 NSIGDGGAKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSI 280

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             EGA+ IA AL  N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  
Sbjct: 281 SPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGA 340

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
           A+AL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+   +        
Sbjct: 341 AQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASI-------- 392

Query: 520 NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
            G S                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 393 -GAS-----------------------GAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKA 427

Query: 580 IAQALKANEDVAVTSLNLANNFL 602
           +A ALK N   ++  LNL  N L
Sbjct: 428 LANALKVNS--SLRRLNLQENSL 448



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 149/272 (54%), Gaps = 11/272 (4%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R+L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 74  RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 133

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L  N  ++ L L  
Sbjct: 134 DLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQK 193

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L      IG  GA+ +A+ L+ N  +  LDL++N + 
Sbjct: 194 NSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 253

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + +L  SL  N +  +GA+ +A +    N  L ++DL  N
Sbjct: 254 DA------GVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHAL-CANSTLKNLDLTAN 306

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            + D GA AIA A++  E+  +TSL+L  NF+
Sbjct: 307 LLHDQGARAIAVAVR--ENRTLTSLHLQWNFI 336



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +S+D+     GD+G   +A +L  N     +      I A+G +     L  N  L+
Sbjct: 352 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 411

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 412 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 471

Query: 282 NNNMIDYSGFTSLAEALLENS 302
             N I  SG   ++EA+  N+
Sbjct: 472 QGNHIGDSGARMISEAIKTNA 492



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 381 ALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 440

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 441 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 499


>gi|301605721|ref|XP_002932504.1| PREDICTED: protein NLRC3 [Xenopus (Silurana) tropicalis]
          Length = 1071

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/454 (32%), Positives = 229/454 (50%), Gaps = 37/454 (8%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNI 218
            +L+  +++ M    F D  +  LA  L     A + +S A N ++  G+KA    L  N 
Sbjct: 641  QLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNR 700

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L  L+L  N IG  G   L ++L  N  +  L L +  ++ EGA+ +A+ L  N  LR 
Sbjct: 701  TLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRA 760

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L +  N I   G  SL+ +L +N  ++ L L+GN  G  GA ALA+ L+ N  L  L L 
Sbjct: 761  LNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQ 820

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             NSI D G+  L SGLS  +  L  L++  NSI  +GA  +AE ++   +LL ++L  N 
Sbjct: 821  SNSISDRGLSLLTSGLSQNR-SLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANL 879

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            + DEG E +A AL++N+++ ++ L  N +    A  +A  L+ N  +  LDL  N +G +
Sbjct: 880  LHDEGMEALARALRENQSLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALGDE 939

Query: 459  GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
            GA ALS+ LK +  ++ L L    IGASG + +A+ L  N ++  LDLR N +       
Sbjct: 940  GAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIG------ 993

Query: 519  CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                      L+GAK LA + K +N  L S++L  N I  DGA 
Sbjct: 994  --------------------------LRGAKALAGALK-INNTLQSLNLQENSIVLDGAI 1026

Query: 579  AIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +A A+  N   ++TSL+L  N + + G   ++D
Sbjct: 1027 CLANAVSGNS--SLTSLSLQGNHIGQSGAKVISD 1058



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 219/425 (51%), Gaps = 37/425 (8%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQS-NIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
            Q    +    NG     ++    +L++ + A++ ++L+ N + + GVK L   L+ N  +
Sbjct: 643  QYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNRTL 702

Query: 249  ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
              L L S ++   GA A+AE+L++N +L  L L NN I   G   LA++LL N  +R+L+
Sbjct: 703  AVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALN 762

Query: 309  LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            +  N  GA G  +L+  L+ N+ L+EL L GNS+GD G  AL   L S   KL+ LD+ +
Sbjct: 763  IQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKS-NSKLSTLDLQS 821

Query: 369  NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
            NSIS +G   +   +   +SL  +NL  N IG EGA+ +A++L++N T+  +DL  N +H
Sbjct: 822  NSISDRGLSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANLLH 881

Query: 429  SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             +G  A+AR L++N  + SL L +N +    A+ L+  L+ +  +  L L    +G  GA
Sbjct: 882  DEGMEALARALRENQSLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALGDEGA 941

Query: 489  EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
              ++D L+ NNT+S                         A+Y    M+  S       G 
Sbjct: 942  AALSDALKENNTLS-------------------------ALYLQGTMIGAS-------GT 969

Query: 549  KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
            + LA +   VN +L ++DL  N I   GA A+A ALK N    + SLNL  N +   G  
Sbjct: 970  QSLANAL-AVNRSLKTLDLRGNNIGLRGAKALAGALKINN--TLQSLNLQENSIVLDGAI 1026

Query: 609  ALTDA 613
             L +A
Sbjct: 1027 CLANA 1031



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 1/343 (0%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            L E  +  +   S+++       EG  FLA+SL  N+    ++   N I A G+++  G 
Sbjct: 720  LAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNIGAEGVESLSGS 779

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            L+ N  L+ L LSGN +GD G   L + L  N+ +  L L S  + D G   +   L  N
Sbjct: 780  LKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQSNSISDRGLSLLTSGLSQN 839

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
              L+ L L  N I   G  +LAE+L  NST+  L L  N     G  ALA+ L  N+SL 
Sbjct: 840  RSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARALRENQSLE 899

Query: 334  ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
             LHL  N +     R L + L   K  L  LD+  N++  +GA  +++ +K   +L  + 
Sbjct: 900  SLHLQWNFLRVASARYLAAALRVNKA-LRCLDLQENALGDEGAAALSDALKENNTLSALY 958

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L    IG  G + +A+AL  NR++ T+DL GNNI  +GA A+A  LK N+ + SL+L  N
Sbjct: 959  LQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQEN 1018

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             I  DGA  L+  +  + ++ +L L    IG SGA+ ++D ++
Sbjct: 1019 SIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISDTIK 1061



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 189/360 (52%), Gaps = 22/360 (6%)

Query: 266 IAELLKNNSILRVLE----LNNNMIDYSGFTSLAEALL------ENSTIRSLHLNGNYGG 315
           +++ L  N + R+L       N  ++ +GF  +   LL      ++  I+ + L  N   
Sbjct: 626 LSQCLSFNLVQRLLPQLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRLS 685

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G  AL + L  N++L  L LH N+IG  G  AL   L S +  L+ L++ NN I ++G
Sbjct: 686 NRGVKALGRALMVNRTLAVLDLHSNNIGPSGAMALAEVLRSNQVLLS-LNLQNNQIKSEG 744

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +A+ +   + L  +N+  N+IG EG E ++ +LKQN+ +  + L GN++  +GA+A+
Sbjct: 745 AQFLAQSLLANRKLRALNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAAL 804

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A  LK NS +++LDL  N I   G   L+  L  + ++  L L    IG  GA+ +A+ L
Sbjct: 805 AEALKSNSKLSTLDLQSNSISDRGLSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAESL 864

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQ 553
           R N+T+  LDL AN L DE      G+     A+   + +    L  N+L+   A+ LA 
Sbjct: 865 RRNSTLLHLDLTANLLHDE------GMEALARALRENQSLESLHLQWNFLRVASARYLAA 918

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + +V N+AL  +DL  N + D+GA A++ ALK N    +++L L    +   G  +L +A
Sbjct: 919 ALRV-NKALRCLDLQENALGDEGAAALSDALKENN--TLSALYLQGTMIGASGTQSLANA 975



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 154/294 (52%), Gaps = 13/294 (4%)

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N    L  N + + L   +    L +  N   D  +  L S L ++   +  + +  N +
Sbjct: 625 NLSQCLSFNLVQRLLPQLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRL 684

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S +G   +   +   ++L  ++L+ N+IG  GA  +A+ L+ N+ + +++L  N I S+G
Sbjct: 685 SNRGVKALGRALMVNRTLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEG 744

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A  +A+ L  N  + +L++  N IGA+G ++LS  LK +  +  L L    +G  GA  +
Sbjct: 745 AQFLAQSLLANRKLRALNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAAL 804

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI---YSLKHMLFYSLCINYLQGA 548
           A+ L+ N+ +S LDL++N + D       GLS   S +    SLKH+      I  ++GA
Sbjct: 805 AEALKSNSKLSTLDLQSNSISDR------GLSLLTSGLSQNRSLKHLNLRENSIG-IEGA 857

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
           + LA+S +  N  L  +DL  N + D+G  A+A+AL+ N+  ++ SL+L  NFL
Sbjct: 858 QALAESLR-RNSTLLHLDLTANLLHDEGMEALARALRENQ--SLESLHLQWNFL 908



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 92/203 (45%), Gaps = 28/203 (13%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L E  +       +D++     DEG+  LA +L  NQ+ E +    N +  A  +
Sbjct: 855  EGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARALRENQSLESLHLQWNFLRVASAR 914

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN---------------AGVERL-- 251
                 L+ N AL+ L+L  N +GDEG   L D L +N               +G + L  
Sbjct: 915  YLAAALRVNKALRCLDLQENALGDEGAAALSDALKENNTLSALYLQGTMIGASGTQSLAN 974

Query: 252  ------QLSSVDLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
                   L ++DLR       GAKA+A  LK N+ L+ L L  N I   G   LA A+  
Sbjct: 975  ALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQENSIVLDGAICLANAVSG 1034

Query: 301  NSTIRSLHLNGNYGGALGANALA 323
            NS++ SL L GN+ G  GA  ++
Sbjct: 1035 NSSLTSLSLQGNHIGQSGAKVIS 1057



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E    L++  KE    S++ + G   G  G   LA +L  N++ + +    N I   G K
Sbjct: 939  EGAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAK 998

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A  G L+ N  L++LNL  N I  +G  CL + +  N+ +  L L    +   GAK I++
Sbjct: 999  ALAGALKINNTLQSLNLQENSIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISD 1058

Query: 269  LLKNNS 274
             +KN++
Sbjct: 1059 TIKNSA 1064


>gi|410985304|ref|XP_003998963.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Felis catus]
          Length = 1064

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/441 (35%), Positives = 228/441 (51%), Gaps = 11/441 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            SK  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 624  SKGVLQSLLPQLLYCRSLRLDSNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 683

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L  L+L GN IG +G K L D L  N  +  L L +  +RD GA+ +AE
Sbjct: 684  ALARSLLVNRSLTALDLRGNSIGPQGAKALADALKINRTLAFLSLQNNAIRDNGARFVAE 743

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G    A+AL +N +++ L  + N  G  GA ALAK L+ 
Sbjct: 744  ALAANRTLSVLHLQKNTIGPLGAQQTADALKQNRSLKELIFSSNSIGDKGAEALAKALKV 803

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L  L++  NSIS++GA  +A+ + +  +
Sbjct: 804  NQGLESLDLQSNSISDAGVAALMGALCTNQ-TLISLNLRENSISSEGARDLAQALCSNST 862

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ +A A+++NR +T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 863  LKNLDLTANLLHDQGAQAVALAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSL 922

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA AL+  LK +  +  L L    IGA GA+ + D L  N T+ ILDLR 
Sbjct: 923  DLQENAIGDEGASALASALKANTALTALYLQVASIGARGAQALGDALAVNRTLEILDLRG 982

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   G  C+A +    N +L  I+
Sbjct: 983  NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGVICVATALS-GNHSLQHIN 1035

Query: 567  LAFNEIRDDGAFAIAQALKAN 587
            L  N I + GA  I++A+K N
Sbjct: 1036 LQGNHIGESGARMISEAIKTN 1056



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 179/340 (52%), Gaps = 13/340 (3%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L++N         L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 639 RSLRLDSNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTAL 698

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNSIG +G +AL   L   +  LA L + NN+I   GA  VAE +   ++L  ++L 
Sbjct: 699 DLRGNSIGPQGAKALADALKINR-TLAFLSLQNNAIRDNGARFVAEALAANRTLSVLHLQ 757

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA++ ADALKQNR++  +    N+I  KGA A+A+ LK N  + SLDL  N I
Sbjct: 758 KNTIGPLGAQQTADALKQNRSLKELIFSSNSIGDKGAEALAKALKVNQGLESLDLQSNSI 817

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I + GA  +A  L  N+T+  LDL AN L D+ 
Sbjct: 818 SDAGVAALMGALCTNQTLISLNLRENSISSEGARDLAQALCSNSTLKNLDLTANLLHDQ- 876

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIR 573
             G   ++    A+   + +    L  N++Q   AK L Q+ + +N +LTS+DL  N I 
Sbjct: 877 --GAQAVAL---AVRENRALTSLHLQWNFIQAGAAKALGQALQ-LNRSLTSLDLQENAIG 930

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D+GA A+A ALKAN   A+T+L L    +   G  AL DA
Sbjct: 931 DEGASALASALKAN--TALTALYLQVASIGARGAQALGDA 968



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 161/301 (53%), Gaps = 2/301 (0%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
            ++QT +   K+ R+   +  S  + GD+G   LA++L  NQ  E +   +N I+ AG+ A
Sbjct: 766  AQQTADAL-KQNRSLKELIFSSNSIGDKGAEALAKALKVNQGLESLDLQSNSISDAGVAA 824

Query: 210  FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
              G L +N  L +LNL  N I  EG + L   L  N+ ++ L L++  L D+GA+A+A  
Sbjct: 825  LMGALCTNQTLISLNLRENSISSEGARDLAQALCSNSTLKNLDLTANLLHDQGAQAVALA 884

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
            ++ N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA+ALA  L+ N
Sbjct: 885  VRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASALASALKAN 944

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             +L  L+L   SIG  G +AL   L+  +  L +LD+  N+I   GA  +A  +K   SL
Sbjct: 945  TALTALYLQVASIGARGAQALGDALAVNR-TLEILDLRGNAIGVAGAKALANALKVNSSL 1003

Query: 390  LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
              +NL  N +G +G   +A AL  N ++  I+L GN+I   GA  I+  +K N+   +++
Sbjct: 1004 RRLNLQENSLGMDGVICVATALSGNHSLQHINLQGNHIGESGARMISEAIKTNAPSCTVE 1063

Query: 450  L 450
            +
Sbjct: 1064 M 1064



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 147/286 (51%), Gaps = 11/286 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 639 RSLRLDSNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTAL 698

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+  + L  N I   GA  +A  L  N  ++ L L  
Sbjct: 699 DLRGNSIGPQGAKALADALKINRTLAFLSLQNNAIRDNGARFVAEALAANRTLSVLHLQK 758

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+  ++ LK + ++  L      IG  GAE +A  L+ N  +  LDL++N + 
Sbjct: 759 NTIGPLGAQQTADALKQNRSLKELIFSSNSIGDKGAEALAKALKVNQGLESLDLQSNSIS 818

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + ++  +L  N +  +GA+ LAQ+    N  L ++DL  N
Sbjct: 819 DA------GVAALMGALCTNQTLISLNLRENSISSEGARDLAQAL-CSNSTLKNLDLTAN 871

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            + D GA A+A A++ N   A+TSL+L  NF+      AL  A  L
Sbjct: 872 LLHDQGAQAVALAVRENR--ALTSLHLQWNFIQAGAAKALGQALQL 915


>gi|281343653|gb|EFB19237.1| hypothetical protein PANDA_014381 [Ailuropoda melanoleuca]
          Length = 1086

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 151/440 (34%), Positives = 228/440 (51%), Gaps = 9/440 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            SK  L     +L    S+ +    F D  +  L   L G +   + +S A N I   G K
Sbjct: 646  SKGVLQSLLPQLLYCRSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAK 705

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L  L+L  N IG +G K L D L  N  +  L L S  +RD GA+++AE
Sbjct: 706  ALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDNGARSVAE 765

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+ L +N +++ L  + N  G  GA ALA  L+ 
Sbjct: 766  ALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKV 825

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK 387
            N+ L  L L  NSI D G+ ALM  L + +  L  L++  NSIS++GA  +A  +  NC 
Sbjct: 826  NQGLESLDLQSNSISDAGVAALMGALCANQ-TLISLNLRENSISSEGARELARALCINC- 883

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            +L  ++L  N + D+GA+ IA A+++N+ +T++ L  N I +  A A+ + L+ N  +TS
Sbjct: 884  TLKNLDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTS 943

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            LDL  N IG +GA A++  LK +  +  L L    IG+ GA+ + D L  N T+ ILDLR
Sbjct: 944  LDLQENAIGDEGASAVASALKANTALTALYLQVASIGSRGAQALGDALAVNKTLEILDLR 1003

Query: 508  ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
             N +              +S++  L ++   SL ++   GA C+A +    N +L  I+L
Sbjct: 1004 GNTIGAAGAKALANALKVNSSLRRL-NLQENSLGMD---GAICVATALS-GNHSLQHINL 1058

Query: 568  AFNEIRDDGAFAIAQALKAN 587
              N I + GA  I++A++ N
Sbjct: 1059 QGNHIGESGARMISEAIRTN 1078



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 204/421 (48%), Gaps = 62/421 (14%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N IG++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 689  IQRISLAENQIGNKGAKALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFL 748

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I  +G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL    
Sbjct: 749  SLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSS 808

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G  AL   L   +G L  LD+ +NSIS  G   +   +   ++L+ +NL  N I
Sbjct: 809  NSIGDGGAEALAMALKVNQG-LESLDLQSNSISDAGVAALMGALCANQTLISLNLRENSI 867

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA ++A AL  N T+  +DL  N +  +GA AIA  +++N  +TSL L +N I A  
Sbjct: 868  SSEGARELARALCINCTLKNLDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNFIQAGA 927

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            AKAL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+            
Sbjct: 928  AKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTALTALYLQV----------- 976

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV---------------------- 557
                   ++I S              +GA+ L  +  V                      
Sbjct: 977  -------ASIGS--------------RGAQALGDALAVNKTLEILDLRGNTIGAAGAKAL 1015

Query: 558  -----VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
                 VN +L  ++L  N +  DGA  +A AL  N   ++  +NL  N + + G   +++
Sbjct: 1016 ANALKVNSSLRRLNLQENSLGMDGAICVATALSGNH--SLQHINLQGNHIGESGARMISE 1073

Query: 613  A 613
            A
Sbjct: 1074 A 1074



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 175/340 (51%), Gaps = 13/340 (3%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+NN         L   L  ++  I+ + L  N  G  GA ALA+ L  N+SL  L
Sbjct: 661 RSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAKALARSLLVNRSLTAL 720

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  NSIG +G +AL   L   +  LA L + +N+I   GA  VAE +   ++L  ++L 
Sbjct: 721 DLRSNSIGPQGAKALADALKINR-TLAFLSLQSNAIRDNGARSVAEALAANRTLSVLHLQ 779

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+++AD LKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 780 KNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSI 839

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I + GA  +A  L  N T+  LDL AN L+D+ 
Sbjct: 840 SDAGVAALMGALCANQTLISLNLRENSISSEGARELARALCINCTLKNLDLTANLLQDQ- 898

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIR 573
                G      A+   + +    L  N++Q   AK L Q+ ++ N +LTS+DL  N I 
Sbjct: 899 -----GAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQL-NRSLTSLDLQENAIG 952

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D+GA A+A ALKAN   A+T+L L    +   G  AL DA
Sbjct: 953 DEGASAVASALKAN--TALTALYLQVASIGSRGAQALGDA 990



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+   +  S  + GD G   LA +L  NQ  E +   +N I+ AG+ A  
Sbjct: 789  QRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSISDAGVAALM 848

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N  L +LNL  N I  EG + L   L  N  ++ L L++  L+D+GA+AIA  ++
Sbjct: 849  GALCANQTLISLNLRENSISSEGARELARALCINCTLKNLDLTANLLQDQGAQAIAVAMR 908

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA+A+A  L+ N +
Sbjct: 909  ENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTA 968

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G +AL   L+  K  L +LD+  N+I A GA  +A  +K   SL  
Sbjct: 969  LTALYLQVASIGSRGAQALGDALAVNK-TLEILDLRGNTIGAAGAKALANALKVNSSLRR 1027

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL  N ++  I+L GN+I   GA  I+  ++ N+   ++++
Sbjct: 1028 LNLQENSLGMDGAICVATALSGNHSLQHINLQGNHIGESGARMISEAIRTNAPSCTVEM 1086



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 151/286 (52%), Gaps = 11/286 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL  +
Sbjct: 661 RSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAKALARSLLVNRSLTAL 720

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+  + L  N I   GA ++A  L  N  ++ L L  
Sbjct: 721 DLRSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDNGARSVAEALAANRTLSVLHLQK 780

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L      IG  GAE +A  L+ N  +  LDL++N + 
Sbjct: 781 NTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSIS 840

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + ++  +L  N +  +GA+ LA++   +N  L ++DL  N
Sbjct: 841 DA------GVAALMGALCANQTLISLNLRENSISSEGARELARAL-CINCTLKNLDLTAN 893

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            ++D GA AIA A++ N+  A+TSL+L  NF+      AL  A  L
Sbjct: 894 LLQDQGAQAIAVAMRENQ--ALTSLHLQWNFIQAGAAKALGQALQL 937


>gi|301779075|ref|XP_002924946.1| PREDICTED: protein NLRC3-like [Ailuropoda melanoleuca]
          Length = 1066

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 151/440 (34%), Positives = 228/440 (51%), Gaps = 9/440 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            SK  L     +L    S+ +    F D  +  L   L G +   + +S A N I   G K
Sbjct: 626  SKGVLQSLLPQLLYCRSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAK 685

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L  L+L  N IG +G K L D L  N  +  L L S  +RD GA+++AE
Sbjct: 686  ALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDNGARSVAE 745

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+ L +N +++ L  + N  G  GA ALA  L+ 
Sbjct: 746  ALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKV 805

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK 387
            N+ L  L L  NSI D G+ ALM  L + +  L  L++  NSIS++GA  +A  +  NC 
Sbjct: 806  NQGLESLDLQSNSISDAGVAALMGALCANQ-TLISLNLRENSISSEGARELARALCINC- 863

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            +L  ++L  N + D+GA+ IA A+++N+ +T++ L  N I +  A A+ + L+ N  +TS
Sbjct: 864  TLKNLDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTS 923

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            LDL  N IG +GA A++  LK +  +  L L    IG+ GA+ + D L  N T+ ILDLR
Sbjct: 924  LDLQENAIGDEGASAVASALKANTALTALYLQVASIGSRGAQALGDALAVNKTLEILDLR 983

Query: 508  ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
             N +              +S++  L ++   SL ++   GA C+A +    N +L  I+L
Sbjct: 984  GNTIGAAGAKALANALKVNSSLRRL-NLQENSLGMD---GAICVATALS-GNHSLQHINL 1038

Query: 568  AFNEIRDDGAFAIAQALKAN 587
              N I + GA  I++A++ N
Sbjct: 1039 QGNHIGESGARMISEAIRTN 1058



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 204/421 (48%), Gaps = 62/421 (14%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N IG++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 669  IQRISLAENQIGNKGAKALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFL 728

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I  +G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL    
Sbjct: 729  SLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSS 788

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G  AL   L   +G L  LD+ +NSIS  G   +   +   ++L+ +NL  N I
Sbjct: 789  NSIGDGGAEALAMALKVNQG-LESLDLQSNSISDAGVAALMGALCANQTLISLNLRENSI 847

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA ++A AL  N T+  +DL  N +  +GA AIA  +++N  +TSL L +N I A  
Sbjct: 848  SSEGARELARALCINCTLKNLDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNFIQAGA 907

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            AKAL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L L+            
Sbjct: 908  AKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTALTALYLQV----------- 956

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV---------------------- 557
                   ++I S              +GA+ L  +  V                      
Sbjct: 957  -------ASIGS--------------RGAQALGDALAVNKTLEILDLRGNTIGAAGAKAL 995

Query: 558  -----VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
                 VN +L  ++L  N +  DGA  +A AL  N   ++  +NL  N + + G   +++
Sbjct: 996  ANALKVNSSLRRLNLQENSLGMDGAICVATALSGNH--SLQHINLQGNHIGESGARMISE 1053

Query: 613  A 613
            A
Sbjct: 1054 A 1054



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 175/340 (51%), Gaps = 13/340 (3%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L L+NN         L   L  ++  I+ + L  N  G  GA ALA+ L  N+SL  L
Sbjct: 641 RSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAKALARSLLVNRSLTAL 700

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  NSIG +G +AL   L   +  LA L + +N+I   GA  VAE +   ++L  ++L 
Sbjct: 701 DLRSNSIGPQGAKALADALKINR-TLAFLSLQSNAIRDNGARSVAEALAANRTLSVLHLQ 759

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+++AD LKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I
Sbjct: 760 KNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSI 819

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              G  AL   L  +  + +L L    I + GA  +A  L  N T+  LDL AN L+D+ 
Sbjct: 820 SDAGVAALMGALCANQTLISLNLRENSISSEGARELARALCINCTLKNLDLTANLLQDQ- 878

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIR 573
                G      A+   + +    L  N++Q   AK L Q+ ++ N +LTS+DL  N I 
Sbjct: 879 -----GAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQL-NRSLTSLDLQENAIG 932

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D+GA A+A ALKAN   A+T+L L    +   G  AL DA
Sbjct: 933 DEGASAVASALKAN--TALTALYLQVASIGSRGAQALGDA 970



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+   +  S  + GD G   LA +L  NQ  E +   +N I+ AG+ A  
Sbjct: 769  QRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSISDAGVAALM 828

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N  L +LNL  N I  EG + L   L  N  ++ L L++  L+D+GA+AIA  ++
Sbjct: 829  GALCANQTLISLNLRENSISSEGARELARALCINCTLKNLDLTANLLQDQGAQAIAVAMR 888

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA+A+A  L+ N +
Sbjct: 889  ENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTA 948

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G +AL   L+  K  L +LD+  N+I A GA  +A  +K   SL  
Sbjct: 949  LTALYLQVASIGSRGAQALGDALAVNK-TLEILDLRGNTIGAAGAKALANALKVNSSLRR 1007

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL  N ++  I+L GN+I   GA  I+  ++ N+   ++++
Sbjct: 1008 LNLQENSLGMDGAICVATALSGNHSLQHINLQGNHIGESGARMISEAIRTNAPSCTVEM 1066



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 151/286 (52%), Gaps = 11/286 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL  +
Sbjct: 641 RSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAKALARSLLVNRSLTAL 700

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+  + L  N I   GA ++A  L  N  ++ L L  
Sbjct: 701 DLRSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDNGARSVAEALAANRTLSVLHLQK 760

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L      IG  GAE +A  L+ N  +  LDL++N + 
Sbjct: 761 NTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSIS 820

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ + + ++  +L  N +  +GA+ LA++   +N  L ++DL  N
Sbjct: 821 DA------GVAALMGALCANQTLISLNLRENSISSEGARELARAL-CINCTLKNLDLTAN 873

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            ++D GA AIA A++ N+  A+TSL+L  NF+      AL  A  L
Sbjct: 874 LLQDQGAQAIAVAMRENQ--ALTSLHLQWNFIQAGAAKALGQALQL 917


>gi|222137288|gb|ACM45226.1| NLRC3 receptor [Ictalurus punctatus]
          Length = 800

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 234/462 (50%), Gaps = 37/462 (8%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
           +L +   +L   S + M    F D+ +  L   L    +  + +S A + I++ GIK   
Sbjct: 363 SLKQLLPQLLYCSKLRMENNKFKDDAMELLGSLLSAKDSHIQSLSMADSSISSKGIKPLS 422

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N  L TL+L GN IG +G K L D L  N  +  + L S  + DEGA A+AE+L+
Sbjct: 423 RALLVNRTLTTLDLHGNNIGTKGAKTLADALKMNQVIVSVNLQSNQIGDEGAHALAEVLQ 482

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N  L  L +  N I   G   +AEAL +N  ++ L+++GN+ G +GA ALA+ L  N +
Sbjct: 483 SNRKLSTLNVKKNSIGPEGVKKIAEALKKNQILQDLNVSGNHLGDIGALALAQALAVNHT 542

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L+ L L  NS+ D G++AL   L   KG L  L++  NSI  +GA  +   ++   +L  
Sbjct: 543 LQTLSLRSNSVSDRGMKALTQALCYNKG-LTKLNLRENSIGVEGARAIGRALQENHTLRE 601

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N + DEG + IA A+K NR +T++ L  N + +  A A+A+ L+ N+ I  LDL 
Sbjct: 602 LDLTANLLNDEGVKAIAAAVKVNRALTSLHLQWNFMKAGAAKALAQSLQSNTFIQLLDLQ 661

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +G DG  +L+  LK + ++  L L     G +GA  +A+ L  N ++  LDLR N +
Sbjct: 662 ENALGDDGVVSLAGALKVNSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNSI 721

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
                                            + GAK L+ + K  N +L S++L  N 
Sbjct: 722 G--------------------------------MGGAKALSSALK-TNRSLRSLNLQENS 748

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +  DGA  IA AL+ N    +T +NL  N + + G   ++DA
Sbjct: 749 LGMDGAIFIATALRGNHQ--LTYINLQGNGIGESGAKVVSDA 788



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 179/355 (50%), Gaps = 1/355 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +TL +  K  +   SV++     GDEG   LAE L  N+    ++   N I   G+K   
Sbjct: 447 KTLADALKMNQVIVSVNLQSNQIGDEGAHALAEVLQSNRKLSTLNVKKNSIGPEGVKKIA 506

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L+ LN+SGN +GD G   L   L  N  ++ L L S  + D G KA+ + L 
Sbjct: 507 EALKKNQILQDLNVSGNHLGDIGALALAQALAVNHTLQTLSLRSNSVSDRGMKALTQALC 566

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L  N I   G  ++  AL EN T+R L L  N     G  A+A  ++ N++
Sbjct: 567 YNKGLTKLNLRENSIGVEGARAIGRALQENHTLRELDLTANLLNDEGVKAIAAAVKVNRA 626

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  LHL  N +     +AL   L S    + +LD+  N++   G   +A  +K   SL+ 
Sbjct: 627 LTSLHLQWNFMKAGAAKALAQSLQSNTF-IQLLDLQENALGDDGVVSLAGALKVNSSLMV 685

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L     G+ GA  +A+AL  N+++ T+DL GN+I   GA A++  LK N  + SL+L 
Sbjct: 686 LYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNSIGMGGAKALSSALKTNRSLRSLNLQ 745

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            N +G DGA  ++  L+ +  +  + L    IG SGA+ V+D +R +    ++D+
Sbjct: 746 ENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIRSDAPECVVDI 800



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 1/218 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + +    +E      +D++     DEG+  +A ++  N+    +    N + A   K
Sbjct: 584 EGARAIGRALQENHTLRELDLTANLLNDEGVKAIAAAVKVNRALTSLHLQWNFMKAGAAK 643

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    LQSN  ++ L+L  N +GD+GV  L   L  N+ +  L L  V   + GA A+AE
Sbjct: 644 ALAQSLQSNTFIQLLDLQENALGDDGVVSLAGALKVNSSLMVLYLQGVSAGEAGAVALAE 703

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L  N  L  L+L  N I   G  +L+ AL  N ++RSL+L  N  G  GA  +A  L G
Sbjct: 704 ALTVNQSLHTLDLRGNSIGMGGAKALSSALKTNRSLRSLNLQENSLGMDGAIFIATALRG 763

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           N  L  ++L GN IG+ G + +   + S   +  V+DI
Sbjct: 764 NHQLTYINLQGNGIGESGAKVVSDAIRSDAPE-CVVDI 800


>gi|311251627|ref|XP_003124699.1| PREDICTED: protein NLRC3 [Sus scrofa]
          Length = 1066

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 154/441 (34%), Positives = 229/441 (51%), Gaps = 11/441 (2%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S   L     +L    S+ +    F D  +  L   L G +     +S A N I+  G K
Sbjct: 626  SPGVLQSLLPQLLYCQSLRLDANQFQDPVMELLGSVLSGNDCRIRRISLAENQISNKGAK 685

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+A+AE
Sbjct: 686  ALARSLLVNRSLTTLDLHSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDDGARALAE 745

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L +N +   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 746  ALAANRTLSVLHLQSNAVGPVGTQWIADALKQNRSLKELIFSSNSIGDGGAKALAEALKV 805

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L+ L L  NSI D G+ ALM+ L + +  L+ L++  NSIS  GA  +A  +    +
Sbjct: 806  NQGLKSLDLQSNSISDTGVAALMAALCTNQTLLS-LNLRENSISPDGAQDLARALCTNST 864

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NR +T++ L  N I +  A A+ + L+ N+ +TSL
Sbjct: 865  LKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSL 924

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 925  DLQENAIGDEGASAVAIALKANTTLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 984

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L   GA C+A +    N  L  I 
Sbjct: 985  NAI------GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALS-GNHGLQHIS 1037

Query: 567  LAFNEIRDDGAFAIAQALKAN 587
            L  N I + GA  I++A+K N
Sbjct: 1038 LQGNHIGESGARMISEAIKTN 1058



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 195/383 (50%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 669  IRRISLAENQISNKGAKALARSLLVNRSLTTLDLHSNSIGPQGAKALADALKINRTLAFL 728

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I   G  +LAEAL  N T+  LHL  N  G +G   +A  L+ N+SL+EL    
Sbjct: 729  SLQSNAIRDDGARALAEALAANRTLSVLHLQSNAVGPVGTQWIADALKQNRSLKELIFSS 788

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL +NL  N I
Sbjct: 789  NSIGDGGAKALAEALKVNQG-LKSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSI 847

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              +GA+ +A AL  N T+ ++DL  N +H +GA AIA  +++N  +TSL L +N I A  
Sbjct: 848  SPDGAQDLARALCTNSTLKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGA 907

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            AKAL + L+ + ++ +L L    IG  GA  VA  L+ N T++ L L+   +        
Sbjct: 908  AKALGQALQLNTSLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQVASIGAP----- 962

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
                                       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 963  ---------------------------GAQALGEAL-AVNRTLEILDLRGNAIGVAGAKA 994

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 995  LANALKVNS--SLRRLNLQENSL 1015



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 11/286 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS    ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 641 QSLRLDANQFQDPVMELLGSVLSGNDCRIRRISLAENQISNKGAKALARSLLVNRSLTTL 700

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L+ N IG +GA+ +ADALK NRT+  + L  N I   GA A+A  L  N  ++ L L  
Sbjct: 701 DLHSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDDGARALAEALAANRTLSVLHLQS 760

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N +G  G + +++ LK + ++  L      IG  GA+ +A+ L+ N  +  LDL++N + 
Sbjct: 761 NAVGPVGTQWIADALKQNRSLKELIFSSNSIGDGGAKALAEALKVNQGLKSLDLQSNSIS 820

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++   +A+ + + +L  +L  N +   GA+ LA++    N  L S+DL  N
Sbjct: 821 D------TGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARAL-CTNSTLKSLDLTAN 873

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            + D GA AIA A++ N   A+TSL+L  NF+      AL  A  L
Sbjct: 874 LLHDQGAQAIAVAVRENR--ALTSLHLQWNFIQAGAAKALGQALQL 917


>gi|183985790|gb|AAI66378.1| LOC100158644 protein [Xenopus (Silurana) tropicalis]
          Length = 566

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 149/454 (32%), Positives = 229/454 (50%), Gaps = 37/454 (8%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNI 218
           +L+  +++ M    F D  +  LA  L     A + +S A N ++  G+KA    L  N 
Sbjct: 136 QLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNR 195

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L  L+L  N IG  G   L ++L  N  +  L L +  ++ EGA+ +A+ L  N  LR 
Sbjct: 196 TLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRA 255

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L +  N I   G  SL+ +L +N  ++ L L+GN  G  GA ALA+ L+ N  L  L L 
Sbjct: 256 LNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQ 315

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NSI D G+  L SGLS  +  L  L++  NSI  +GA  +AE ++   +LL ++L  N 
Sbjct: 316 SNSISDRGLSLLTSGLSQNR-SLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANL 374

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + DEG E +A AL++N+++ ++ L  N +    A  +A  L+ N  +  LDL  N +G +
Sbjct: 375 LHDEGMEALARALRENQSLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALGDE 434

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA ALS+ LK +  ++ L L    IGASG + +A+ L  N ++  LDLR N +       
Sbjct: 435 GAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNI------- 487

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                     L+GAK LA + K +N  L S++L  N I  DGA 
Sbjct: 488 -------------------------GLRGAKALAGALK-INNTLQSLNLQENSIVLDGAI 521

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            +A A+  N   ++TSL+L  N + + G   ++D
Sbjct: 522 CLANAVSGNS--SLTSLSLQGNHIGQSGAKVISD 553



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/415 (33%), Positives = 217/415 (52%), Gaps = 37/415 (8%)

Query: 200 NGITAAGIKAFDGVLQS-NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
           NG     ++    +L++ + A++ ++L+ N + + GVK L   L+ N  +  L L S ++
Sbjct: 148 NGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNRTLAVLDLHSNNI 207

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
              GA A+AE+L++N +L  L L NN I   G   LA++LL N  +R+L++  N  GA G
Sbjct: 208 GPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNIGAEG 267

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             +L+  L+ N+ L+EL L GNS+GD G  AL   L S   KL+ LD+ +NSIS +G   
Sbjct: 268 VESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKS-NSKLSTLDLQSNSISDRGLSL 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +   +   +SL  +NL  N IG EGA+ +A++L++N T+  +DL  N +H +G  A+AR 
Sbjct: 327 LTSGLSQNRSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARA 386

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L++N  + SL L +N +    A+ L+  L+ +  +  L L    +G  GA  ++D L+ N
Sbjct: 387 LRENQSLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALGDEGAAALSDALKEN 446

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
           NT+S                         A+Y    M+  S       G + LA +   V
Sbjct: 447 NTLS-------------------------ALYLQGTMIGAS-------GTQSLANAL-AV 473

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N +L ++DL  N I   GA A+A ALK N    + SLNL  N +   G   L +A
Sbjct: 474 NRSLKTLDLRGNNIGLRGAKALAGALKINN--TLQSLNLQENSIVLDGAICLANA 526



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 1/343 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  +  +   S+++       EG  FLA+SL  N+    ++   N I A G+++  G 
Sbjct: 215 LAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNIGAEGVESLSGS 274

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L+ L LSGN +GD G   L + L  N+ +  L L S  + D G   +   L  N
Sbjct: 275 LKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQSNSISDRGLSLLTSGLSQN 334

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L+ L L  N I   G  +LAE+L  NST+  L L  N     G  ALA+ L  N+SL 
Sbjct: 335 RSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARALRENQSLE 394

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            LHL  N +     R L + L   K  L  LD+  N++  +GA  +++ +K   +L  + 
Sbjct: 395 SLHLQWNFLRVASARYLAAALRVNKA-LRCLDLQENALGDEGAAALSDALKENNTLSALY 453

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L    IG  G + +A+AL  NR++ T+DL GNNI  +GA A+A  LK N+ + SL+L  N
Sbjct: 454 LQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQEN 513

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            I  DGA  L+  +  + ++ +L L    IG SGA+ ++D ++
Sbjct: 514 SIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISDTIK 556



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 180/336 (53%), Gaps = 18/336 (5%)

Query: 286 IDYSGFTSLAEALL------ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++ +GF  +   LL      ++  I+ + L  N     G  AL + L  N++L  L LH 
Sbjct: 145 MENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNRTLAVLDLHS 204

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N+IG  G  AL   L S +  L+ L++ NN I ++GA  +A+ +   + L  +N+  N+I
Sbjct: 205 NNIGPSGAMALAEVLRSNQVLLS-LNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNI 263

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G EG E ++ +LKQN+ +  + L GN++  +GA+A+A  LK NS +++LDL  N I   G
Sbjct: 264 GAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQSNSISDRG 323

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
              L+  L  + ++  L L    IG  GA+ +A+ LR N+T+  LDL AN L DE     
Sbjct: 324 LSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANLLHDE----- 378

Query: 520 NGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
            G+     A+   + +    L  N+L+   A+ LA + +V N+AL  +DL  N + D+GA
Sbjct: 379 -GMEALARALRENQSLESLHLQWNFLRVASARYLAAALRV-NKALRCLDLQENALGDEGA 436

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            A++ ALK  E+  +++L L    +   G  +L +A
Sbjct: 437 AALSDALK--ENNTLSALYLQGTMIGASGTQSLANA 470



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 92/203 (45%), Gaps = 28/203 (13%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q L E  +       +D++     DEG+  LA +L  NQ+ E +    N +  A  +
Sbjct: 350 EGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARALRENQSLESLHLQWNFLRVASAR 409

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN---------------AGVERL-- 251
                L+ N AL+ L+L  N +GDEG   L D L +N               +G + L  
Sbjct: 410 YLAAALRVNKALRCLDLQENALGDEGAAALSDALKENNTLSALYLQGTMIGASGTQSLAN 469

Query: 252 ------QLSSVDLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
                  L ++DLR       GAKA+A  LK N+ L+ L L  N I   G   LA A+  
Sbjct: 470 ALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQENSIVLDGAICLANAVSG 529

Query: 301 NSTIRSLHLNGNYGGALGANALA 323
           NS++ SL L GN+ G  GA  ++
Sbjct: 530 NSSLTSLSLQGNHIGQSGAKVIS 552



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L++  KE    S++ + G   G  G   LA +L  N++ + +    N I   G K
Sbjct: 434 EGAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAK 493

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A  G L+ N  L++LNL  N I  +G  CL + +  N+ +  L L    +   GAK I++
Sbjct: 494 ALAGALKINNTLQSLNLQENSIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISD 553

Query: 269 LLKNNS 274
            +KN++
Sbjct: 554 TIKNSA 559


>gi|126335269|ref|XP_001370217.1| PREDICTED: protein NLRC3 [Monodelphis domestica]
          Length = 1093

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/397 (35%), Positives = 213/397 (53%), Gaps = 10/397 (2%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
            +++S A N I   G K+    L  N +L  L+L  N IG +G K L D L  N  +  L 
Sbjct: 697  QKISLAENQIHNKGTKSLARSLLVNRSLTVLDLRSNSIGPQGAKALADSLKINRVLVSLS 756

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L +  ++D+GAK +A+ L  N  L VL+L  N I   G  S+A+AL +N +++ L  + N
Sbjct: 757  LQNNAIKDDGAKFVADALMVNHKLSVLQLQKNTIGPLGAKSIADALKKNGSLKELIFSSN 816

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
              G  G+ ALA+ L+ N+SL  L L  NSI D G+ AL   L S +  L+ L++  NSIS
Sbjct: 817  SVGNDGSKALAEALKVNQSLITLDLQSNSISDAGVTALTHALRSNQTLLS-LNLRENSIS 875

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             +GA  +A  + + + L  ++L  N + DEGA+ IA A+K+NR + ++ L  N I +  A
Sbjct: 876  PEGARDIASALCSNRVLQNLDLTANLLQDEGAQAIALAVKENRALKSLHLQWNFIQANAA 935

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
             A+ + L+ N  +T LDL  N IG +G  ALS  LK + ++  L L    IG  GA+ + 
Sbjct: 936  KALGQALQSNRSLTILDLQENAIGDEGMMALSRALKINTSLTALYLQVASIGVLGAQALG 995

Query: 493  DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKC 550
            D L  N T+ ILDLR N +      G +G     +A+     +   +L  N L   GA C
Sbjct: 996  DALAVNRTLEILDLRGNSI------GADGAKAMANALKINPSLQMLNLQENSLGMDGAIC 1049

Query: 551  LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            +A +    N  L  ++L  N I + GA  I++A+K N
Sbjct: 1050 IATALS-GNHGLQHVNLQGNHIGESGARMISEAIKTN 1085



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 178/348 (51%), Gaps = 1/348 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ + +D+   + G +G   LA+SL  N+    +S   N I   G K     L  N  L 
Sbjct: 722  RSLTVLDLRSNSIGPQGAKALADSLKINRVLVSLSLQNNAIKDDGAKFVADALMVNHKLS 781

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L L  N IG  G K + D L  N  ++ L  SS  + ++G+KA+AE LK N  L  L+L
Sbjct: 782  VLQLQKNTIGPLGAKSIADALKKNGSLKELIFSSNSVGNDGSKALAEALKVNQSLITLDL 841

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G T+L  AL  N T+ SL+L  N     GA  +A  L  N+ L+ L L  N 
Sbjct: 842  QSNSISDAGVTALTHALRSNQTLLSLNLRENSISPEGARDIASALCSNRVLQNLDLTANL 901

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG +A+   +   +  L  L +  N I A  A  + + +++ +SL  ++L  N IGD
Sbjct: 902  LQDEGAQAIALAVKENRA-LKSLHLQWNFIQANAAKALGQALQSNRSLTILDLQENAIGD 960

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG   ++ ALK N ++T + L   +I   GA A+   L  N  +  LDL  N IGADGAK
Sbjct: 961  EGMMALSRALKINTSLTALYLQVASIGVLGAQALGDALAVNRTLEILDLRGNSIGADGAK 1020

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            A++  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N
Sbjct: 1021 AMANALKINPSLQMLNLQENSLGMDGAICIATALSGNHGLQHVNLQGN 1068



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 172/345 (49%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R   S+ +      D+G  F+A++L  N     +    N I   G K+    L+ N +LK
Sbjct: 750  RVLVSLSLQNNAIKDDGAKFVADALMVNHKLSVLQLQKNTIGPLGAKSIADALKKNGSLK 809

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N +G++G K L + L  N  +  L L S  + D G  A+   L++N  L  L L
Sbjct: 810  ELIFSSNSVGNDGSKALAEALKVNQSLITLDLQSNSISDAGVTALTHALRSNQTLLSLNL 869

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   +A AL  N  +++L L  N     GA A+A  ++ N++L+ LHL  N 
Sbjct: 870  RENSISPEGARDIASALCSNRVLQNLDLTANLLQDEGAQAIALAVKENRALKSLHLQWNF 929

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L S +  L +LD+  N+I  +G   ++  +K   SL  + L +  IG 
Sbjct: 930  IQANAAKALGQALQSNRS-LTILDLQENAIGDEGMMALSRALKINTSLTALYLQVASIGV 988

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + DAL  NRT+  +DL GN+I + GA A+A  LK N  +  L+L  N +G DGA 
Sbjct: 989  LGAQALGDALAVNRTLEILDLRGNSIGADGAKAMANALKINPSLQMLNLQENSLGMDGAI 1048

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    IG SGA  +++ ++ N    I+++
Sbjct: 1049 CIATALSGNHGLQHVNLQGNHIGESGARMISEAIKTNAPNCIVEM 1093



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 175/355 (49%), Gaps = 36/355 (10%)

Query: 276  LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            ++ + L  N I   G  SLA +LL N ++  L L  N  G  GA ALA  L+ N+ L  L
Sbjct: 696  IQKISLAENQIHNKGTKSLARSLLVNRSLTVLDLRSNSIGPQGAKALADSLKINRVLVSL 755

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  N+I D+G + +   L     KL+VL +  N+I   GA  +A+ +K   SL  +   
Sbjct: 756  SLQNNAIKDDGAKFVADALMVNH-KLSVLQLQKNTIGPLGAKSIADALKKNGSLKELIFS 814

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN-- 453
             N +G++G++ +A+ALK N+++ T+DL  N+I   G +A+   L+ N  + SL+L  N  
Sbjct: 815  SNSVGNDGSKALAEALKVNQSLITLDLQSNSISDAGVTALTHALRSNQTLLSLNLRENSI 874

Query: 454  -PIGA-------------------------DGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             P GA                         +GA+A++  +K +  + +L L W  I A+ 
Sbjct: 875  SPEGARDIASALCSNRVLQNLDLTANLLQDEGAQAIALAVKENRALKSLHLQWNFIQANA 934

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG 547
            A+ +   L+ N +++ILDL+ N + DE   G   LS       SL  +      I  L G
Sbjct: 935  AKALGQALQSNRSLTILDLQENAIGDE---GMMALSRALKINTSLTALYLQVASIGVL-G 990

Query: 548  AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            A+ L  +   VN  L  +DL  N I  DGA A+A ALK N  + +  LNL  N L
Sbjct: 991  AQALGDAL-AVNRTLEILDLRGNSIGADGAKAMANALKINPSLQM--LNLQENSL 1042



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 149/283 (52%), Gaps = 11/283 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LSS+   +  + +  N I  KG   +A  +   +SL  +
Sbjct: 668 RNLRLDNNQFQDNVMELLGSVLSSKDCYIQKISLAENQIHNKGTKSLARSLLVNRSLTVL 727

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +AD+LK NR + ++ L  N I   GA  +A  L  N  ++ L L  
Sbjct: 728 DLRSNSIGPQGAKALADSLKINRVLVSLSLQNNAIKDDGAKFVADALMVNHKLSVLQLQK 787

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GAK++++ LK +G++  L      +G  G++ +A+ L+ N ++  LDL++N + 
Sbjct: 788 NTIGPLGAKSIADALKKNGSLKELIFSSNSVGNDGSKALAEALKVNQSLITLDLQSNSIS 847

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           D       G++    A+ S + +L  +L  N +  +GA+ +A +    N  L ++DL  N
Sbjct: 848 DA------GVTALTHALRSNQTLLSLNLRENSISPEGARDIASAL-CSNRVLQNLDLTAN 900

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            ++D+GA AIA A+K N   A+ SL+L  NF+      AL  A
Sbjct: 901 LLQDEGAQAIALAVKENR--ALKSLHLQWNFIQANAAKALGQA 941


>gi|46446975|ref|YP_008340.1| hypothetical protein pc1341 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400616|emb|CAF24065.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1764

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 142/417 (34%), Positives = 213/417 (51%), Gaps = 8/417 (1%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            F+  GI     +     L  N AL++L L  N I D G +     L  NA ++ L L + 
Sbjct: 1337 FSRVGINDKEAEIIANALALNTALRSLRLQNNQISDRGAEAFARALASNATLKALWLDNN 1396

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             + +EGA+AIA+ L +N+ LR L L NN I   G  ++A+AL  N+T+ +L L+ N    
Sbjct: 1397 QISNEGAEAIAQALASNTALRELYLGNNQISDKGTEAIAQALASNTTLETLWLDNNQISF 1456

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             G  AL + L  N +L+ +HL+ N I DEG  A+   L+S    L +LD+GNN IS KG 
Sbjct: 1457 KGVKALVQSLAFNTTLKVIHLNSNKISDEGAEAIAQALAS-NTTLKILDLGNNQISDKGG 1515

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              + + +     L  + L  N I DEGAE IA AL  N T+ T+ L  N I  KG  A+ 
Sbjct: 1516 KEIGKALAFNTVLRRLYLRNNQISDEGAEAIAQALASNTTLETLWLDNNQISFKGVKALV 1575

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            + L  N+V+ +L L  N I   G +AL++ L  +  +  + L   QI   G E  A  L 
Sbjct: 1576 QSLASNTVLENLSLNGNQISNKGMEALAQALASNRKLREISLNGNQISDEGMEAFARALT 1635

Query: 497  YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
             N  + +L L +N + D+           ++A   L+ +      IN  +GA+ +AQ+F 
Sbjct: 1636 SNTALKVLHLGSNQISDKGAGALAQALASNTA---LRELYLGDNQIND-KGAETIAQAF- 1690

Query: 557  VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              N  L ++ L  N+I D+GA AIAQA  +N    + +L+L  N ++  G  A+  A
Sbjct: 1691 ASNTKLETLSLKGNQISDEGAKAIAQAFASN--TKLETLSLRGNLISDEGAKAIAQA 1745



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/300 (38%), Positives = 170/300 (56%), Gaps = 1/300 (0%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
            +G+  L +SL +N T + +   +N I+  G +A    L SN  LK L+L  N I D+G K
Sbjct: 1457 KGVKALVQSLAFNTTLKVIHLNSNKISDEGAEAIAQALASNTTLKILDLGNNQISDKGGK 1516

Query: 237  CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
             +   L  N  + RL L +  + DEGA+AIA+ L +N+ L  L L+NN I + G  +L +
Sbjct: 1517 EIGKALAFNTVLRRLYLRNNQISDEGAEAIAQALASNTTLETLWLDNNQISFKGVKALVQ 1576

Query: 297  ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            +L  N+ + +L LNGN     G  ALA+ L  N+ LRE+ L+GN I DEG+ A    L+S
Sbjct: 1577 SLASNTVLENLSLNGNQISNKGMEALAQALASNRKLREISLNGNQISDEGMEAFARALTS 1636

Query: 357  RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
                L VL +G+N IS KGA  +A+ + +  +L  + L  N I D+GAE IA A   N  
Sbjct: 1637 NTA-LKVLHLGSNQISDKGAGALAQALASNTALRELYLGDNQINDKGAETIAQAFASNTK 1695

Query: 417  ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
            + T+ L GN I  +GA AIA+    N+ + +L L  N I  +GAKA+++    + N+ T+
Sbjct: 1696 LETLSLKGNQISDEGAKAIAQAFASNTKLETLSLRGNLISDEGAKAIAQAFASNTNLKTI 1755



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 200/434 (46%), Gaps = 34/434 (7%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A  S+ +      D G    A +L  N T + +    N I+  G +A    L SN AL+ 
Sbjct: 1359 ALRSLRLQNNQISDRGAEAFARALASNATLKALWLDNNQISNEGAEAIAQALASNTALRE 1418

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L L  N I D+G + +   L  N  +E L L +  +  +G KA+ + L  N+ L+V+ LN
Sbjct: 1419 LYLGNNQISDKGTEAIAQALASNTTLETLWLDNNQISFKGVKALVQSLAFNTTLKVIHLN 1478

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +N I   G  ++A+AL  N+T++ L L  N     G   + K L  N  LR L+L  N I
Sbjct: 1479 SNKISDEGAEAIAQALASNTTLKILDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQI 1538

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             DEG  A+   L+S    L  L + NN IS KG   + + + +   L  ++L  N I ++
Sbjct: 1539 SDEGAEAIAQALAS-NTTLETLWLDNNQISFKGVKALVQSLASNTVLENLSLNGNQISNK 1597

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            G E +A AL  NR +  I L GN I  +G  A AR L  N+ +  L L  N I   GA A
Sbjct: 1598 GMEALAQALASNRKLREISLNGNQISDEGMEAFARALTSNTALKVLHLGSNQISDKGAGA 1657

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
            L++ L  +  +  L LG  QI   GAE +A     N  +  L L+ N + DE        
Sbjct: 1658 LAQALASNTALRELYLGDNQINDKGAETIAQAFASNTKLETLSLKGNQISDE-------- 1709

Query: 523  SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
                                    GAK +AQ+F   N  L ++ L  N I D+GA AIAQ
Sbjct: 1710 ------------------------GAKAIAQAF-ASNTKLETLSLRGNLISDEGAKAIAQ 1744

Query: 583  ALKANEDVAVTSLN 596
            A  +N ++     N
Sbjct: 1745 AFASNTNLKTIYFN 1758



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 175/363 (48%), Gaps = 36/363 (9%)

Query: 238  LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
            L  + ++++G   L  S V + D+ A+ IA  L  N+ LR L L NN I   G  + A A
Sbjct: 1322 LFQLYMNDSGTIALGFSRVGINDKEAEIIANALALNTALRSLRLQNNQISDRGAEAFARA 1381

Query: 298  LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L  N+T+++L L+ N     GA A+A+ L  N +LREL+L  N I D+G  A+   L+S 
Sbjct: 1382 LASNATLKALWLDNNQISNEGAEAIAQALASNTALRELYLGNNQISDKGTEAIAQALAS- 1440

Query: 358  KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
               L  L + NN IS KG   + + +    +L  I+L  N I DEGAE IA AL  N T+
Sbjct: 1441 NTTLETLWLDNNQISFKGVKALVQSLAFNTTLKVIHLNSNKISDEGAEAIAQALASNTTL 1500

Query: 418  TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
              +DLG N I  KG   I + L  N+V+  L L  N I  +GA+A+++ L  +  + TL 
Sbjct: 1501 KILDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQISDEGAEAIAQALASNTTLETLW 1560

Query: 478  LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
            L   QI   G + +   L  N  +  L L  N + +                        
Sbjct: 1561 LDNNQISFKGVKALVQSLASNTVLENLSLNGNQISN------------------------ 1596

Query: 538  YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
                    +G + LAQ+    N  L  I L  N+I D+G  A A+AL +N   A+  L+L
Sbjct: 1597 --------KGMEALAQAL-ASNRKLREISLNGNQISDEGMEAFARALTSN--TALKVLHL 1645

Query: 598  ANN 600
             +N
Sbjct: 1646 GSN 1648



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+      D+G   + ++L +N     +    N I+  G +A    L SN  L+TL L 
Sbjct: 1503 LDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQISDEGAEAIAQALASNTTLETLWLD 1562

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N I  +GVK L   L  N  +E L L+   + ++G +A+A+ L +N  LR + LN N I
Sbjct: 1563 NNQISFKGVKALVQSLASNTVLENLSLNGNQISNKGMEALAQALASNRKLREISLNGNQI 1622

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
               G  + A AL  N+ ++ LHL  N     GA ALA+ L  N +LREL+L  N I D+G
Sbjct: 1623 SDEGMEAFARALTSNTALKVLHLGSNQISDKGAGALAQALASNTALRELYLGDNQINDKG 1682

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
               +    +S   KL  L +  N IS +GA  +A+   +   L  ++L  N I DEGA+ 
Sbjct: 1683 AETIAQAFAS-NTKLETLSLKGNQISDEGAKAIAQAFASNTKLETLSLRGNLISDEGAKA 1741

Query: 407  IADALKQNRTITTIDLGGN 425
            IA A   N  + TI    N
Sbjct: 1742 IAQAFASNTNLKTIYFNNN 1760


>gi|395747418|ref|XP_002826110.2| PREDICTED: protein NLRC3 [Pongo abelii]
          Length = 1037

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 153/449 (34%), Positives = 220/449 (48%), Gaps = 39/449 (8%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G                            AKA+A+
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQG----------------------------AKALAD 716

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             LK N  L  L L  N I   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ 
Sbjct: 717  ALKINRTLTSLSLQGNTIGDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ 776

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+SL+EL L  NSIGD G +AL   L   +G L  LD+  NSIS +GA  +A  ++   +
Sbjct: 777  NRSLKELMLSSNSIGDGGGKALAEALKVNQG-LESLDLRENSISPEGAQAIAHALRANST 835

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 836  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 895

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 896  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 955

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSID 566
            N +      G  G     +A+     +   +L  N L+  GA C+A +    N  L  I+
Sbjct: 956  NAI------GVAGAKALANALKVNSSLRKLNLQENSLEMDGAICVATALS-GNHRLQHIN 1008

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L  N I D GA  I++A+K N       +
Sbjct: 1009 LQGNHIGDSGARMISEAIKTNAPTCTVEM 1037



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 196/366 (53%), Gaps = 25/366 (6%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           +L+L +   +D   + +  +L      ++ + L  N I   G  +LA +LL N ++ SL 
Sbjct: 641 KLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLD 700

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L GN  G  GA ALA  L+ N++L  L L GN+IGD+G R++   L+S +  L++L +  
Sbjct: 701 LRGNSIGPQGAKALADALKINRTLTSLSLQGNTIGDDGARSMAEALASNR-TLSMLHLQK 759

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           NSI   GA  +A+ +K  +SL  + L  N IGD G + +A+ALK N+ + ++DL  N+I 
Sbjct: 760 NSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGGKALAEALKVNQGLESLDLRENSIS 819

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            +GA AIA  L+ NS + +LDL  N +   GA+A++  ++ +  + +L L W  I A  A
Sbjct: 820 PEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAA 879

Query: 489 EFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ- 546
           + +   L+ N +++ LDL+ N + D+  C+    L   ++A+ +L           YLQ 
Sbjct: 880 QALGQALQLNRSLTSLDLQENAIGDDGACAVARALKV-NTALTAL-----------YLQV 927

Query: 547 ------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
                 GA+ L ++   VN  L  +DL  N I   GA A+A ALK N   ++  LNL  N
Sbjct: 928 ASIGAPGAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKALANALKVNS--SLRKLNLQEN 984

Query: 601 FLTKFG 606
            L   G
Sbjct: 985 SLEMDG 990



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 154/310 (49%), Gaps = 37/310 (11%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R+L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L GN I   GA ++A  L  N  ++ L L  
Sbjct: 700 DLRGNSIGPQGAKALADALKINRTLTSLSLQGNTIGDDGARSMAEALASNRTLSMLHLQK 759

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L L    IG  G + +A+ L+ N  +  LDLR N + 
Sbjct: 760 NSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGGKALAEALKVNQGLESLDLRENSIS 819

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK-------------- 556
            E   G   ++    A  +LK++    L  N L  QGA+ +A + +              
Sbjct: 820 PE---GAQAIAHALRANSTLKNL---DLTANLLHDQGARAIAVAVRENRTLTSLHLQWNF 873

Query: 557 -------------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
                         +N +LTS+DL  N I DDGA A+A+ALK N   A+T+L L    + 
Sbjct: 874 IQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVN--TALTALYLQVASIG 931

Query: 604 KFGQSALTDA 613
             G   L +A
Sbjct: 932 APGAQVLGEA 941


>gi|354493274|ref|XP_003508768.1| PREDICTED: protein NLRC3 [Cricetulus griseus]
          Length = 1088

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 230/465 (49%), Gaps = 37/465 (7%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +   + +S   N I   G K
Sbjct: 648  SQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIQNISLTENQIGNKGAK 707

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  ++D G   +AE
Sbjct: 708  ALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAE 767

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  + +L+L  N+I  +G   +A+AL +N +++ L  + N  G  GA ALA+ L+G
Sbjct: 768  ALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALKG 827

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  N+I + G+  LM  L   +  L+ L++  NSIS +GA  +A+ +    +
Sbjct: 828  NQGLENLDLQSNAISNTGVAVLMRALCVNQ-TLSSLNLRENSISPEGAQALAQALCMNNT 886

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 887  LKHLDLTANLLHDQGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 946

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IG  GA+ + + L  N T+ ILDLR 
Sbjct: 947  DLQENAIGDEGASAVAGALKVNTTLTALYLQVASIGTQGAQALGEALAVNRTLEILDLRG 1006

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +         G++                       GAK LA + K +N +L  ++L 
Sbjct: 1007 NDI---------GVA-----------------------GAKALANALK-LNSSLRRLNLQ 1033

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             N +  DGA  +A AL  N    +  +NL  N + + G   +++A
Sbjct: 1034 ENSLGMDGAIYVAAALSENH--GLHHINLQGNPIGESGARMISEA 1076



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 176/358 (49%), Gaps = 1/358 (0%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            +  + L +  K+ R  +S+ +      D G+  +AE+L  NQT   +    N I   G +
Sbjct: 732  QGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQ 791

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                 L+ N +LK L  S N IGD G   L + L  N G+E L L S  + + G   +  
Sbjct: 792  RMADALKQNKSLKELMFSSNTIGDGGAMALAEALKGNQGLENLDLQSNAISNTGVAVLMR 851

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L  L L  N I   G  +LA+AL  N+T++ L L  N     GA A+A  +  
Sbjct: 852  ALCVNQTLSSLNLRENSISPEGAQALAQALCMNNTLKHLDLTANLLHDQGAQAIAVAVGE 911

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N SL  LHL  N I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +
Sbjct: 912  NHSLTHLHLQWNFIQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASAVAGALKVNTT 970

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  + L +  IG +GA+ + +AL  NRT+  +DL GN+I   GA A+A  LK NS +  L
Sbjct: 971  LTALYLQVASIGTQGAQALGEALAVNRTLEILDLRGNDIGVAGAKALANALKLNSSLRRL 1030

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            +L  N +G DGA  ++  L  +  ++ + L    IG SGA  +++ ++ N     +++
Sbjct: 1031 NLQENSLGMDGAIYVAAALSENHGLHHINLQGNPIGESGARMISEAIKTNAPTCTVEM 1088



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 179/360 (49%), Gaps = 21/360 (5%)

Query: 251 LQLSSVDLRDEGA--------KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-EN 301
           LQLS  D+R + A          +  LL      + L L+NN         L   L  ++
Sbjct: 631 LQLS--DIRSQEANLSLCLSQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKD 688

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             I+++ L  N  G  GA ALA+ L  N+SL  L L  N+IG +G +AL   L   +  L
Sbjct: 689 CRIQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNR-TL 747

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L + +N I   G   +AE + + +++  + L  N IG  GA+++ADALKQN+++  + 
Sbjct: 748 TSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELM 807

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
              N I   GA A+A  LK N  + +LDL  N I   G   L   L  +  +++L L   
Sbjct: 808 FSSNTIGDGGAMALAEALKGNQGLENLDLQSNAISNTGVAVLMRALCVNQTLSSLNLREN 867

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
            I   GA+ +A  L  NNT+  LDL AN L D+   G   ++      +SL H+    L 
Sbjct: 868 SISPEGAQALAQALCMNNTLKHLDLTANLLHDQ---GAQAIAVAVGENHSLTHL---HLQ 921

Query: 542 INYLQG--AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            N++Q   A+ L Q+ ++ N  LT++DL  N I D+GA A+A ALK N  +    L +A+
Sbjct: 922 WNFIQAGAARALGQALQL-NRTLTTLDLQENAIGDEGASAVAGALKVNTTLTALYLQVAS 980


>gi|188501476|gb|ACD54608.1| leucine rich repeat containing proteins-like protein [Adineta vaga]
          Length = 1420

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 158/519 (30%), Positives = 271/519 (52%), Gaps = 31/519 (5%)

Query: 107 KLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSS 166
           ++++     KP   +  T E +++S     N   G+ G       + L +  +     + 
Sbjct: 15  EVIQNYDSQKPLNATLQTLEQLDFS-----NKQIGYKGA------EQLADAVRNSTTLTE 63

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S  + GD+G+ +LA++L +N+T   +  A N I A G        ++N  L  +NLS
Sbjct: 64  LDLSKNHIGDQGVQYLADALLHNKTIATLDLADNSIGAHGAHHLANAFRNNKTLVNINLS 123

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +GDEG++ L D    N  +      S  + D GA+ +A+ L+NN+ +  L+L  N I
Sbjct: 124 NNQLGDEGIEYLADAFRYNTVIMDF---SNRITDYGAECLAKTLRNNTTINTLDLRWNNI 180

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   LAEAL  N+T+ +L L+ N     GA +LA  L+ N  L  L+L  N IG  G
Sbjct: 181 STKGTQQLAEALPHNTTLTNLDLSWNAIDDQGAQSLADALQNNTILETLNLASNRIGGHG 240

Query: 347 IRALMSGLSSRKGK--LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            + L+   +SR+    L   ++ +N I   G   +A+ +K  KS++ ++L  N IGD+G 
Sbjct: 241 AQQLV---ASRQNHDILTTFNLSSNHIGHDGMKLLADALKTNKSIVTLDLASNRIGDDGV 297

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + +  ALK N T+TT++L  N I + G + +++ ++D + +T +DL+YN IG  GAK L+
Sbjct: 298 QHLIVALKNNTTLTTLNLSSNQIRTSGIAYLSQAIEDTTALTVIDLSYNEIGITGAKDLA 357

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
            ++  +  I TL +   QIG+SG ++++  L+ N TI  +DL  N + DE      G+  
Sbjct: 358 TIILTNATITTLLVSNNQIGSSGIQYISYALQNNTTIISIDLSKNQIGDE------GMKH 411

Query: 525 FHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
             +A+     +    L  N +  +G + L    K  N  LT+I L  N+I D GA ++A 
Sbjct: 412 LANALKHNTTITTIDLSQNQITDKGIEHLGNVLK-FNTTLTNISLVSNKITDKGADSLAS 470

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           +++ ++ + +  LNLA+N +   G  +L  A  L Y+ +
Sbjct: 471 SIQQHK-IMINELNLAHNLIGDQGARSL--ANYLQYQTT 506



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 242/524 (46%), Gaps = 78/524 (14%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSN 217
           K     +++D+S     D+G+  L   L +N T   +S  +N IT  G  +    + Q  
Sbjct: 417 KHNTTITTIDLSQNQITDKGIEHLGNVLKFNTTLTNISLVSNKITDKGADSLASSIQQHK 476

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           I +  LNL+ N IGD+G + L + L     + +L+L    +    ++ +++  ++N+ L 
Sbjct: 477 IMINELNLAHNLIGDQGARSLANYLQYQTTLTKLELIGNPITSNASRYLSDAFRHNTTLV 536

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L L+ + ID     ++  A   NST  SL L  +  G  GA  L        +L  L+L
Sbjct: 537 SLNLSLSQIDEEERQTVTNAYRSNSTFTSLDLEHSGIGRTGAQILT-------TLSNLNL 589

Query: 338 HGNSIGDEGIRALMSGLSSRKGK----------------------------LAVLDIGNN 369
             N I  + I+ L   L  R G                             L  LD+  N
Sbjct: 590 RHNKITGKAIQHLSEAL--RTGTVNEYFSHYFSFHVSSNIDWIQNFLPPQTLTTLDLAAN 647

Query: 370 SISAKGAFHVAEYIKNCKSLLWINL-----------YMND-----------IGDEGAEKI 407
            I  +GA ++A+ I+N K++  ++L           Y+ D           IG EG + +
Sbjct: 648 GIGTEGARYLADAIRNNKTITSLDLKSNKIGSGGVRYLADTLVTLDLGSNAIGTEGIQYL 707

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            D  + N+T++ +DLG N I   GA  +A   ++N  +T+LDL  N IG +G + LS++ 
Sbjct: 708 VDVFQDNKTLSALDLGTNGIGVDGAQHLANAFRNNVTLTTLDLRGNEIGVEGVRHLSDMF 767

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF-FH 526
           + +  +  L L    IG  GA+++A+  R NNT++ L L +NG+R        G+ +   
Sbjct: 768 RDNKTLTILDLRSNGIGDKGAQYLAEAFRNNNTLTTLHLGSNGIR------AKGIRYLLL 821

Query: 527 SAIYSLKHMLFYSLCINY--LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
            A  S + + +  L  N   L+G K LA   +  N+ LT+I+LA N++  +G   IA AL
Sbjct: 822 DAFQSNQTLTYLDLSDNKISLEGVKYLADGLR-TNKTLTNINLANNKVGVEGIQYIADAL 880

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 628
           ++N  V +T L+L+ N   K G      A+ L   +   EV IF
Sbjct: 881 RSN--VTLTMLDLSGN---KMGVEG---AQHLANAIRNNEVVIF 916



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 199/386 (51%), Gaps = 53/386 (13%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
             + N  L TL+L+ N IG EG + + +   DN  +  L L S  + DEGA+ +A+  + N
Sbjct: 1069 FRDNQTLTTLDLTFNAIGPEGAQHIANAFQDNKTLTTLLLGSNRIADEGARHLAKSFRTN 1128

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            + L  L+L  N I   G   LA+A   N+T+ +L L  N  G  GA   A     N +L 
Sbjct: 1129 TTLTTLDLTLNGIGSEGARYLADAFRHNATLTTLDLRSNSIGTEGARCFADAFRNNMTLT 1188

Query: 334  ELHLHGNSIGDEGIRALMSGLSSR-----------KGKLAVLDIGNNSISAKGAFHVAEY 382
             L    N I +EG + L+     +           K K  +L +          +H++  
Sbjct: 1189 SLDFSSNKISNEGAQYLVDIFRDQTEWNRYLMHFEKIKYILLYLA-------YCYHMSTS 1241

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            +   ++L+ ++L  ++IGD G + +ADA++ ++TITTIDL  N+I ++G   +A VL+DN
Sbjct: 1242 V--TQTLVVLDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDN 1299

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +++T LDL++N IGA+GA+ LSE ++ +  I +L L   +IG  GA+++AD  R N T++
Sbjct: 1300 TMLTKLDLSFNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLT 1359

Query: 503  ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
             ++LR+NG+ D                                +GA+ L  + +  N+ L
Sbjct: 1360 TINLRSNGIGD--------------------------------KGAQYLTNALQ-SNKIL 1386

Query: 563  TSIDLAFNEIRDDGAFAIAQALKANE 588
            T++DL+ N I D G   +  AL+ N+
Sbjct: 1387 TNLDLSDNGIGDRGVHLLTTALRDNK 1412



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 250/507 (49%), Gaps = 49/507 (9%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E        +++D+S     D+G   LA++L  N   E ++ A+N I   G +   
Sbjct: 186 QQLAEALPHNTTLTNLDLSWNAIDDQGAQSLADALQNNTILETLNLASNRIGGHGAQQLV 245

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA------ 265
              Q++  L T NLS N IG +G+K L D L  N  +  L L+S  + D+G +       
Sbjct: 246 ASRQNHDILTTFNLSSNHIGHDGMKLLADALKTNKSIVTLDLASNRIGDDGVQHLIVALK 305

Query: 266 ----------------------IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
                                 +++ +++ + L V++L+ N I  +G   LA  +L N+T
Sbjct: 306 NNTTLTTLNLSSNQIRTSGIAYLSQAIEDTTALTVIDLSYNEIGITGAKDLATIILTNAT 365

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           I +L ++ N  G+ G   ++  L+ N ++  + L  N IGDEG++ L + L      +  
Sbjct: 366 ITTLLVSNNQIGSSGIQYISYALQNNTTIISIDLSKNQIGDEGMKHLANAL-KHNTTITT 424

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDL 422
           +D+  N I+ KG  H+   +K   +L  I+L  N I D+GA+ +A +++Q++  I  ++L
Sbjct: 425 IDLSQNQITDKGIEHLGNVLKFNTTLTNISLVSNKITDKGADSLASSIQQHKIMINELNL 484

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I  +GA ++A  L+  + +T L+L  NPI ++ ++ LS+  + +  + +L L   Q
Sbjct: 485 AHNLIGDQGARSLANYLQYQTTLTKLELIGNPITSNASRYLSDAFRHNTTLVSLNLSLSQ 544

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRD---EVCSGCNGLSFFHSAIY--SLKHML- 536
           I     + V +  R N+T + LDL  +G+     ++ +  + L+  H+ I   +++H+  
Sbjct: 545 IDEEERQTVTNAYRSNSTFTSLDLEHSGIGRTGAQILTTLSNLNLRHNKITGKAIQHLSE 604

Query: 537 ---------FYSLCINYLQGAKC-LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
                    ++S   ++   +     Q+F +  + LT++DLA N I  +GA  +A A++ 
Sbjct: 605 ALRTGTVNEYFSHYFSFHVSSNIDWIQNF-LPPQTLTTLDLAANGIGTEGARYLADAIRN 663

Query: 587 NEDVAVTSLNLANNFLTKFGQSALTDA 613
           N+   +TSL+L +N +   G   L D 
Sbjct: 664 NK--TITSLDLKSNKIGSGGVRYLADT 688



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 29/406 (7%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  +++D++    G EG  +LA+++  N+T   +   +N I + G++     L       
Sbjct: 637  QTLTTLDLAANGIGTEGARYLADAIRNNKTITSLDLKSNKIGSGGVRYLADTL------V 690

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL+L  N IG EG++ L D+  DN  +  L L +  +  +GA+ +A   +NN  L  L+L
Sbjct: 691  TLDLGSNAIGTEGIQYLVDVFQDNKTLSALDLGTNGIGVDGAQHLANAFRNNVTLTTLDL 750

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   L++   +N T+  L L  N  G  GA  LA+    N +L  LHL  N 
Sbjct: 751  RGNEIGVEGVRHLSDMFRDNKTLTILDLRSNGIGDKGAQYLAEAFRNNNTLTTLHLGSNG 810

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I  +GIR L+         L  LD+ +N IS +G  ++A+ ++  K+L  INL  N +G 
Sbjct: 811  IRAKGIRYLLLDAFQSNQTLTYLDLSDNKISLEGVKYLADGLRTNKTLTNINLANNKVGV 870

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG + IADAL+ N T+T +DL GN +  +GA  +A  +++N V+         I  + + 
Sbjct: 871  EGIQYIADALRSNVTLTMLDLSGNKMGVEGAQHLANAIRNNEVV---------IFENSSI 921

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
               + +     +  L L   +IG  G +++ D L+ N  I  + +        +   C  
Sbjct: 922  LFIQNIVILKTLIILNLADNRIGDQGVQYLGDALQNNTVIIFVSI--------LILNCLD 973

Query: 522  LSFFHSAIYSLKHMLFYSLCIN-----YLQGAKCLAQSFKVVNEAL 562
            L  F S  Y    ++F+S+ I      YLQ +    +  + V++AL
Sbjct: 974  LYSF-SKSYVFFILIFHSIHIKVLTKVYLQRSDMNNKETQRVSDAL 1018



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 235/504 (46%), Gaps = 65/504 (12%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K  ++  ++D++    GD+G+  L  +L  N T   ++ ++N I  +GI      ++   
Sbjct: 277 KTNKSIVTLDLASNRIGDDGVQHLIVALKNNTTLTTLNLSSNQIRTSGIAYLSQAIEDTT 336

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           AL  ++LS N IG  G K L  I++ NA +  L +S+  +   G + I+  L+NN+ +  
Sbjct: 337 ALTVIDLSYNEIGITGAKDLATIILTNATITTLLVSNNQIGSSGIQYISYALQNNTTIIS 396

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++L+ N I   G   LA AL  N+TI ++ L+ N     G   L   L+ N +L  + L 
Sbjct: 397 IDLSKNQIGDEGMKHLANALKHNTTITTIDLSQNQITDKGIEHLGNVLKFNTTLTNISLV 456

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D+G  +L S +   K  +  L++ +N I  +GA  +A Y++   +L  + L  N 
Sbjct: 457 SNKITDKGADSLASSIQQHKIMINELNLAHNLIGDQGARSLANYLQYQTTLTKLELIGNP 516

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I    +  ++DA + N T+ +++L  + I  +    +    + NS  TSLDL ++ IG  
Sbjct: 517 ITSNASRYLSDAFRHNTTLVSLNLSLSQIDEEERQTVTNAYRSNSTFTSLDLEHSGIGRT 576

Query: 459 GA---------------------KALSEVLK-------------FH--GNIN-------- 474
           GA                     + LSE L+             FH   NI+        
Sbjct: 577 GAQILTTLSNLNLRHNKITGKAIQHLSEALRTGTVNEYFSHYFSFHVSSNIDWIQNFLPP 636

Query: 475 ----TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY 530
               TL L    IG  GA ++AD +R N TI+ LDL++N +      G  G+ +    + 
Sbjct: 637 QTLTTLDLAANGIGTEGARYLADAIRNNKTITSLDLKSNKI------GSGGVRYLADTLV 690

Query: 531 SLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
           +L       L  N +  +G + L   F+  N+ L+++DL  N I  DGA  +A A + N 
Sbjct: 691 TL------DLGSNAIGTEGIQYLVDVFQ-DNKTLSALDLGTNGIGVDGAQHLANAFRNN- 742

Query: 589 DVAVTSLNLANNFLTKFGQSALTD 612
            V +T+L+L  N +   G   L+D
Sbjct: 743 -VTLTTLDLRGNEIGVEGVRHLSD 765



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 160/316 (50%), Gaps = 16/316 (5%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  +++ +      DEG   LA+S   N T   +    NGI + G +      + N  L 
Sbjct: 1101 KTLTTLLLGSNRIADEGARHLAKSFRTNTTLTTLDLTLNGIGSEGARYLADAFRHNATLT 1160

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN----NSILR 277
            TL+L  N IG EG +C  D   +N  +  L  SS  + +EGA+ + ++ ++    N  L 
Sbjct: 1161 TLDLRSNSIGTEGARCFADAFRNNMTLTSLDFSSNKISNEGAQYLVDIFRDQTEWNRYLM 1220

Query: 278  VLELNNNMIDYSGF-----TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
              E    ++ Y  +     TS+ + L+       L L  +  G  G   LA  +  ++++
Sbjct: 1221 HFEKIKYILLYLAYCYHMSTSVTQTLV------VLDLQSDEIGDNGVQYLADAIRNHQTI 1274

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
              + L  NSIG EGI+ L + L      L  LD+  N I A+GA +++E I+   ++  +
Sbjct: 1275 TTIDLSDNSIGAEGIQHLANVLRDNT-MLTKLDLSFNLIGAEGARYLSETIRENTTITSL 1333

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            NL+ N+IG EGA+ +ADA + N+T+TTI+L  N I  KGA  +   L+ N ++T+LDL+ 
Sbjct: 1334 NLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQSNKILTNLDLSD 1393

Query: 453  NPIGADGAKALSEVLK 468
            N IG  G   L+  L+
Sbjct: 1394 NGIGDRGVHLLTTALR 1409



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 140/570 (24%), Positives = 248/570 (43%), Gaps = 136/570 (23%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  + +D+S      EG+ +LA+ L  N+T   ++ A N +   GI+     L+SN+ L 
Sbjct: 828  QTLTYLDLSDNKISLEGVKYLADGLRTNKTLTNINLANNKVGVEGIQYIADALRSNVTLT 887

Query: 222  TLNLSGNPIGDEGVKCLCD-------ILVDNAGVERLQ----------LSSVDLR--DEG 262
             L+LSGN +G EG + L +       ++ +N+ +  +Q          L+  D R  D+G
Sbjct: 888  MLDLSGNKMGVEGAQHLANAIRNNEVVIFENSSILFIQNIVILKTLIILNLADNRIGDQG 947

Query: 263  AKAIAELLKNNSIL---RVLELNNNMIDYSGFTS----------------LAEALLENST 303
             + + + L+NN+++    +L L  N +D   F+                 L +  L+ S 
Sbjct: 948  VQYLGDALQNNTVIIFVSILIL--NCLDLYSFSKSYVFFILIFHSIHIKVLTKVYLQRSD 1005

Query: 304  IRSLHLNGNYGGALGANA----------------LAKGLEGNKS---LRELHLHGNSIGD 344
            + +         AL A+                 ++K +  N +   LR+L      +G 
Sbjct: 1006 MNNKETQ-RVSDALRAHIQTLPAQNVPVTEVLTDVSKTIADNMTKLCLRDL-----KMGP 1059

Query: 345  EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            E  R L +     +  L  LD+  N+I  +GA H+A   ++ K+L  + L  N I DEGA
Sbjct: 1060 EECRHLAAAFRDNQ-TLTTLDLTFNAIGPEGAQHIANAFQDNKTLTTLLLGSNRIADEGA 1118

Query: 405  EK----------------------------IADALKQNRTITTIDLGGNNIHSKGASAIA 436
                                          +ADA + N T+TT+DL  N+I ++GA   A
Sbjct: 1119 RHLAKSFRTNTTLTTLDLTLNGIGSEGARYLADAFRHNATLTTLDLRSNSIGTEGARCFA 1178

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT------------LKLGWC--- 481
               ++N  +TSLD + N I  +GA+ L ++ +     N             L L +C   
Sbjct: 1179 DAFRNNMTLTSLDFSSNKISNEGAQYLVDIFRDQTEWNRYLMHFEKIKYILLYLAYCYHM 1238

Query: 482  ----------------QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
                            +IG +G +++AD +R + TI+ +DL  N +      G  G+   
Sbjct: 1239 STSVTQTLVVLDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSI------GAEGIQHL 1292

Query: 526  HSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
             + +     +    L  N +  +GA+ L+++ +  N  +TS++L  NEI  +GA  +A A
Sbjct: 1293 ANVLRDNTMLTKLDLSFNLIGAEGARYLSETIR-ENTTITSLNLHSNEIGTEGAQYLADA 1351

Query: 584  LKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             + N+   +T++NL +N +   G   LT+A
Sbjct: 1352 FRNNK--TLTTINLRSNGIGDKGAQYLTNA 1379



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 161/359 (44%), Gaps = 32/359 (8%)

Query: 174  FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
             G E    LA +   NQT   +    N I   G +      Q N  L TL L  N I DE
Sbjct: 1057 MGPEECRHLAAAFRDNQTLTTLDLTFNAIGPEGAQHIANAFQDNKTLTTLLLGSNRIADE 1116

Query: 234  GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            G + L      N  +  L L+   +  EGA+ +A+  ++N+ L  L+L +N I   G   
Sbjct: 1117 GARHLAKSFRTNTTLTTLDLTLNGIGSEGARYLADAFRHNATLTTLDLRSNSIGTEGARC 1176

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALAK----GLEGNKSLRE--------------- 334
             A+A   N T+ SL  + N     GA  L        E N+ L                 
Sbjct: 1177 FADAFRNNMTLTSLDFSSNKISNEGAQYLVDIFRDQTEWNRYLMHFEKIKYILLYLAYCY 1236

Query: 335  ------------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                        L L  + IGD G++ L   + + +  +  +D+ +NSI A+G  H+A  
Sbjct: 1237 HMSTSVTQTLVVLDLQSDEIGDNGVQYLADAIRNHQ-TITTIDLSDNSIGAEGIQHLANV 1295

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            +++   L  ++L  N IG EGA  +++ +++N TIT+++L  N I ++GA  +A   ++N
Sbjct: 1296 LRDNTMLTKLDLSFNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQYLADAFRNN 1355

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              +T+++L  N IG  GA+ L+  L+ +  +  L L    IG  G   +   LR N  I
Sbjct: 1356 KTLTTINLRSNGIGDKGAQYLTNALQSNKILTNLDLSDNGIGDRGVHLLTTALRDNKVI 1414



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 227/527 (43%), Gaps = 84/527 (15%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +  ++ +  S++D+     G +G   LA +   N T   +    N I   G++
Sbjct: 702  EGIQYLVDVFQDNKTLSALDLGTNGIGVDGAQHLANAFRNNVTLTTLDLRGNEIGVEGVR 761

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA-IA 267
                + + N  L  L+L  N IGD+G + L +   +N  +  L L S  +R +G +  + 
Sbjct: 762  HLSDMFRDNKTLTILDLRSNGIGDKGAQYLAEAFRNNNTLTTLHLGSNGIRAKGIRYLLL 821

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            +  ++N  L  L+L++N I   G   LA+ L  N T+ +++L  N  G  G   +A  L 
Sbjct: 822  DAFQSNQTLTYLDLSDNKISLEGVKYLADGLRTNKTLTNINLANNKVGVEGIQYIADALR 881

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC- 386
             N +L  L L GN +G EG + L + +  R  ++ + +  N+SI          +I+N  
Sbjct: 882  SNVTLTMLDLSGNKMGVEGAQHLANAI--RNNEVVIFE--NSSIL---------FIQNIV 928

Query: 387  --KSLLWINLYMNDIGDEGAEKIADALKQNRTITTID---LGGNNIHSKGASAIARVLKD 441
              K+L+ +NL  N IGD+G + + DAL+ N  I  +    L   +++S   S +  +L  
Sbjct: 929  ILKTLIILNLADNRIGDQGVQYLGDALQNNTVIIFVSILILNCLDLYSFSKSYVFFILIF 988

Query: 442  NS----VITSLDLAYNPIGADGAKALSEVLKFH-----------------------GNIN 474
            +S    V+T + L  + +     + +S+ L+ H                        N+ 
Sbjct: 989  HSIHIKVLTKVYLQRSDMNNKETQRVSDALRAHIQTLPAQNVPVTEVLTDVSKTIADNMT 1048

Query: 475  TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
             L L   ++G      +A   R N T++ LDL  N +      G  G     +A    K 
Sbjct: 1049 KLCLRDLKMGPEECRHLAAAFRDNQTLTTLDLTFNAI------GPEGAQHIANAFQDNKT 1102

Query: 535  MLFYSLCINYL--QGAKCLAQSFKVV---------------------------NEALTSI 565
            +    L  N +  +GA+ LA+SF+                             N  LT++
Sbjct: 1103 LTTLLLGSNRIADEGARHLAKSFRTNTTLTTLDLTLNGIGSEGARYLADAFRHNATLTTL 1162

Query: 566  DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            DL  N I  +GA   A A + N  + +TSL+ ++N ++  G   L D
Sbjct: 1163 DLRSNSIGTEGARCFADAFRNN--MTLTSLDFSSNKISNEGAQYLVD 1207



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 87/171 (50%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+     GD G+ +LA+++  +QT   +  + N I A GI+    VL+ N  L  L+LS
Sbjct: 1249 LDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLTKLDLS 1308

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IG EG + L + + +N  +  L L S ++  EGA+ +A+  +NN  L  + L +N I
Sbjct: 1309 FNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGI 1368

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
               G   L  AL  N  + +L L+ N  G  G + L   L  NK + E + 
Sbjct: 1369 GDKGAQYLTNALQSNKILTNLDLSDNGIGDRGVHLLTTALRDNKVIIEFYF 1419



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 77/153 (50%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q L +  +  +  +++D+S  + G EG+  LA  L  N    ++  + N I A G +   
Sbjct: 1262 QYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLTKLDLSFNLIGAEGARYLS 1321

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              ++ N  + +LNL  N IG EG + L D   +N  +  + L S  + D+GA+ +   L+
Sbjct: 1322 ETIRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQ 1381

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
            +N IL  L+L++N I   G   L  AL +N  I
Sbjct: 1382 SNKILTNLDLSDNGIGDRGVHLLTTALRDNKVI 1414



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L    ++    + +D+S    G EG  +L+E++  N T   ++  +N I   G +
Sbjct: 1287 EGIQHLANVLRDNTMLTKLDLSFNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQ 1346

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                  ++N  L T+NL  N IGD+G + L + L  N  +  L LS   + D G   +  
Sbjct: 1347 YLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQSNKILTNLDLSDNGIGDRGVHLLTT 1406

Query: 269  LLKNNSIL 276
             L++N ++
Sbjct: 1407 ALRDNKVI 1414


>gi|183178960|gb|ACC43968.1| FBox-LRR protein [Philodina roseola]
          Length = 594

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/350 (36%), Positives = 193/350 (55%), Gaps = 1/350 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+D+     G+EG+ +LA++L  NQT   +   AN I   G K     L+ N  L 
Sbjct: 191 RTLTSLDLGLNEQGNEGVKYLADALKVNQTLMTLDLYANRIDREGAKYLADSLKVNSVLS 250

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL L  N IG EG+K L D L  N  +  L L S  L DEG K +A+ LK N  L  L L
Sbjct: 251 TLKLYSNSIGAEGMKYLADALKTNRALATLTLGSNKLGDEGVKYLADALKCNQTLNTLVL 310

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +       L++AL+ N T+ +L LNGN  G  GA  LA  L  N++L+ L L+   
Sbjct: 311 YQNNLGAEAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIR 370

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +  EG++ L   L S +G L  L++G N +S + A ++++ +K  ++L  ++L  + IG 
Sbjct: 371 LRAEGMKYLAVSLMSNQG-LTRLEVGRNHLSPEAAKYLSDALKINQTLDTLHLDFSSIGV 429

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA+ +++ALK N+T+ T+ L  +++  +     A  LK N  + SLDL  N  G +GAK
Sbjct: 430 EGAKDLSNALKVNQTLHTLILHNSHLGVEEMKYFADALKTNQTLRSLDLNDNKAGVEGAK 489

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            L+E L  + N+ +L+L    IG  GA + A+ L+ N T+ IL+L  N L
Sbjct: 490 YLAEALIKNKNLTSLELKMNDIGVEGARYFANALKINQTLHILNLYGNHL 539



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 239/482 (49%), Gaps = 41/482 (8%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +++ +     G +G  +LA+SL  N T  ++    N   A G K     L+ N  LK
Sbjct: 79  RTLTTLGLGLVTLGAQGAKYLADSLKINSTLNKLRLNHNDFGAEGTKYLFNALKINQTLK 138

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           T+ LS N +  +  +CL D+L+ N  +  L+L    L     K +A  LK N  L  L+L
Sbjct: 139 TIRLSENHVNADAAQCLADVLLSNQTLNTLELYYCYLNATVFKYLATALKVNRTLTSLDL 198

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N     G   LA+AL  N T+ +L L  N     GA  LA  L+ N  L  L L+ NS
Sbjct: 199 GLNEQGNEGVKYLADALKVNQTLMTLDLYANRIDREGAKYLADSLKVNSVLSTLKLYSNS 258

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG EG++ L   L + +  LA L +G+N +  +G  ++A+ +K  ++L  + LY N++G 
Sbjct: 259 IGAEGMKYLADALKTNRA-LATLTLGSNKLGDEGVKYLADALKCNQTLNTLVLYQNNLGA 317

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV----------------- 444
           E A+ ++DAL  N+T+T ++L GN + ++GA  +A  L +N                   
Sbjct: 318 EAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRAEGMK 377

Query: 445 -----------ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
                      +T L++  N +  + AK LS+ LK +  ++TL L +  IG  GA+ +++
Sbjct: 378 YLAVSLMSNQGLTRLEVGRNHLSPEAAKYLSDALKINQTLDTLHLDFSSIGVEGAKDLSN 437

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY--LQGAKCL 551
            L+ N T+  L L  + L      G   + +F  A+ + + +    L  N   ++GAK L
Sbjct: 438 ALKVNQTLHTLILHNSHL------GVEEMKYFADALKTNQTLRSLDLNDNKAGVEGAKYL 491

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
           A++  + N+ LTS++L  N+I  +GA   A ALK N+ + +  LNL  N L   G   L 
Sbjct: 492 AEAL-IKNKNLTSLELKMNDIGVEGARYFANALKINQTLHI--LNLYGNHLNA-GIKYLA 547

Query: 612 DA 613
           DA
Sbjct: 548 DA 549



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 183/355 (51%), Gaps = 2/355 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   ++D+       EG  +LA+SL  N     +   +N I A G+K     L++N AL 
Sbjct: 219 QTLMTLDLYANRIDREGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTNRALA 278

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL L  N +GDEGVK L D L  N  +  L L   +L  E AK +++ L +N  L  LEL
Sbjct: 279 TLTLGSNKLGDEGVKYLADALKCNQTLNTLVLYQNNLGAEAAKYLSDALMSNQTLTNLEL 338

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           N NM+   G   LA+AL+ N T+++L LN     A G   LA  L  N+ L  L +  N 
Sbjct: 339 NGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRAEGMKYLAVSLMSNQGLTRLEVGRNH 398

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +  E  + L   L   +  L  L +  +SI  +GA  ++  +K  ++L  + L+ + +G 
Sbjct: 399 LSPEAAKYLSDALKINQ-TLDTLHLDFSSIGVEGAKDLSNALKVNQTLHTLILHNSHLGV 457

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           E  +  ADALK N+T+ ++DL  N    +GA  +A  L  N  +TSL+L  N IG +GA+
Sbjct: 458 EEMKYFADALKTNQTLRSLDLNDNKAGVEGAKYLAEALIKNKNLTSLELKMNDIGVEGAR 517

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             +  LK +  ++ L L    + A G +++AD LR N T++ L L +N   DE  
Sbjct: 518 YFANALKINQTLHILNLYGNHLNA-GIKYLADALRVNQTLNTLTLYSNYPSDETV 571



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 196/377 (51%), Gaps = 10/377 (2%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L TL L    +G +G K L D L  N+ + +L+L+  D   EG K +   LK N
Sbjct: 75  LKNNRTLTTLGLGLVTLGAQGAKYLADSLKINSTLNKLRLNHNDFGAEGTKYLFNALKIN 134

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L+ + L+ N ++      LA+ LL N T+ +L L   Y  A     LA  L+ N++L 
Sbjct: 135 QTLKTIRLSENHVNADAAQCLADVLLSNQTLNTLELYYCYLNATVFKYLATALKVNRTLT 194

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N  G+EG++ L   L   +  L  LD+  N I  +GA ++A+ +K    L  + 
Sbjct: 195 SLDLGLNEQGNEGVKYLADALKVNQ-TLMTLDLYANRIDREGAKYLADSLKVNSVLSTLK 253

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LY N IG EG + +ADALK NR + T+ LG N +  +G   +A  LK N  + +L L  N
Sbjct: 254 LYSNSIGAEGMKYLADALKTNRALATLTLGSNKLGDEGVKYLADALKCNQTLNTLVLYQN 313

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +GA+ AK LS+ L  +  +  L+L    +G  GA+ +AD L  N T+  L L    LR 
Sbjct: 314 NLGAEAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRA 373

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
           E      G+ +   ++ S + +    +  N+L  + AK L+ + K +N+ L ++ L F+ 
Sbjct: 374 E------GMKYLAVSLMSNQGLTRLEVGRNHLSPEAAKYLSDALK-INQTLDTLHLDFSS 426

Query: 572 IRDDGAFAIAQALKANE 588
           I  +GA  ++ ALK N+
Sbjct: 427 IGVEGAKDLSNALKVNQ 443



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 189/364 (51%), Gaps = 7/364 (1%)

Query: 109 VEKLLMPKPSRPSKPTAEGMNW-----SVGAGTNLLSGFTGKLFRESKQTLNEFAKELRA 163
           V + LM      ++   EG  +      V +  + L  ++  +  E  + L +  K  RA
Sbjct: 217 VNQTLMTLDLYANRIDREGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTNRA 276

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++ +     GDEG+ +LA++L  NQT   +    N + A   K     L SN  L  L
Sbjct: 277 LATLTLGSNKLGDEGVKYLADALKCNQTLNTLVLYQNNLGAEAAKYLSDALMSNQTLTNL 336

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L+GN +G+EG K L D LV+N  ++ L+L+ + LR EG K +A  L +N  L  LE+  
Sbjct: 337 ELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRAEGMKYLAVSLMSNQGLTRLEVGR 396

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +       L++AL  N T+ +LHL+ +  G  GA  L+  L+ N++L  L LH + +G
Sbjct: 397 NHLSPEAAKYLSDALKINQTLDTLHLDFSSIGVEGAKDLSNALKVNQTLHTLILHNSHLG 456

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            E ++     L + +  L  LD+ +N    +GA ++AE +   K+L  + L MNDIG EG
Sbjct: 457 VEEMKYFADALKTNQ-TLRSLDLNDNKAGVEGAKYLAEALIKNKNLTSLELKMNDIGVEG 515

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A   A+ALK N+T+  ++L GN++++ G   +A  L+ N  + +L L  N    +  + L
Sbjct: 516 ARYFANALKINQTLHILNLYGNHLNA-GIKYLADALRVNQTLNTLTLYSNYPSDETVRYL 574

Query: 464 SEVL 467
           + VL
Sbjct: 575 ANVL 578



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 184/354 (51%), Gaps = 2/354 (0%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           +  ++ RE  + L +  K     S++ +   + G EG+ +LA++L  N+    ++  +N 
Sbjct: 227 YANRIDREGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTNRALATLTLGSNK 286

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +   G+K     L+ N  L TL L  N +G E  K L D L+ N  +  L+L+   L +E
Sbjct: 287 LGDEGVKYLADALKCNQTLNTLVLYQNNLGAEAAKYLSDALMSNQTLTNLELNGNMLGNE 346

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAK +A+ L NN  L+ L+LN   +   G   LA +L+ N  +  L +  N+     A  
Sbjct: 347 GAKHLADALVNNRTLKTLKLNEIRLRAEGMKYLAVSLMSNQGLTRLEVGRNHLSPEAAKY 406

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L+  L+ N++L  LHL  +SIG EG + L + L   +  L  L + N+ +  +   + A+
Sbjct: 407 LSDALKINQTLDTLHLDFSSIGVEGAKDLSNALKVNQ-TLHTLILHNSHLGVEEMKYFAD 465

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K  ++L  ++L  N  G EGA+ +A+AL +N+ +T+++L  N+I  +GA   A  LK 
Sbjct: 466 ALKTNQTLRSLDLNDNKAGVEGAKYLAEALIKNKNLTSLELKMNDIGVEGARYFANALKI 525

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           N  +  L+L  N + A G K L++ L+ +  +NTL L           ++A++L
Sbjct: 526 NQTLHILNLYGNHLNA-GIKYLADALRVNQTLNTLTLYSNYPSDETVRYLANVL 578



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 11/209 (5%)

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           I D  +  +T+  +DL    I S+ A  +   LK+N  +T+L L    +GA GAK L++ 
Sbjct: 43  IIDTYQPYQTLNNLDLQFYEISSQAALNLVDALKNNRTLTTLGLGLVTLGAQGAKYLADS 102

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           LK +  +N L+L     GA G +++ + L+ N T+  + L  N +  +       +   +
Sbjct: 103 LKINSTLNKLRLNHNDFGAEGTKYLFNALKINQTLKTIRLSENHVNADAAQCLADVLLSN 162

Query: 527 SAIYSLKHMLFYSLCINYLQGA--KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
             + +L+  L+Y  C  YL     K LA + K VN  LTS+DL  NE  ++G   +A AL
Sbjct: 163 QTLNTLE--LYY--C--YLNATVFKYLATALK-VNRTLTSLDLGLNEQGNEGVKYLADAL 215

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDA 613
           K N+   + +L+L  N + + G   L D+
Sbjct: 216 KVNQ--TLMTLDLYANRIDREGAKYLADS 242



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+++   + G EG  + A +L  NQT   ++   N + A GIK     L+ N  L 
Sbjct: 499 KNLTSLELKMNDIGVEGARYFANALKINQTLHILNLYGNHLNA-GIKYLADALRVNQTLN 557

Query: 222 TLNLSGNPIGDEGVKCLCDILVD 244
           TL L  N   DE V+ L ++L D
Sbjct: 558 TLTLYSNYPSDETVRYLANVLSD 580


>gi|410896007|ref|XP_003961491.1| PREDICTED: protein NLRC3-like [Takifugu rubripes]
          Length = 1067

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 195/350 (55%), Gaps = 1/350 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+++   N G +G  FLAE+L  NQ    ++  +NGI  AG +A   VLQ N  L 
Sbjct: 696  RTLTSLNLRNNNIGSKGARFLAEALKMNQALVSLNLQSNGIDEAGAEALAEVLQCNRKLV 755

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TLN+  N +G  G K + D L  N  +  L + S  L D+G  A+AE L  N  L  L+L
Sbjct: 756  TLNMQKNIVGAGGAKRIADALKTNKTLTELMICSNQLGDKGTAALAEALTVNHTLLSLQL 815

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G T+L +AL  N  + SL+L  N  G  GA  +AK L+ N SL++L L  + 
Sbjct: 816  QSNSISNRGMTALTKALSLNRGLVSLNLRENSIGVEGARNMAKALQKNSSLQDLDLTADL 875

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G++A+ + + + +G L  L +  N I +     +A  +    ++  ++L  N +G+
Sbjct: 876  LHDDGVQAIAAAIKNNQG-LRSLHLQWNFIKSSATKALAHSLHFNTTMELLDLQENAVGN 934

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG   +ADALK N ++ T+ L G ++ + GA A+A  L  N  + +LDL  N +G +GAK
Sbjct: 935  EGVTFLADALKANTSLRTLCLQGVSVGTGGAIALAEALMSNQTLQTLDLRGNSVGMEGAK 994

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            AL+  LK + ++ +L L    +G  GA F+A   + N+ ++ ++L+ NG+
Sbjct: 995  ALANALKTNRSLKSLNLQENSLGMDGAIFIATAFKENHQLTYINLQGNGI 1044



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 223/461 (48%), Gaps = 37/461 (8%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
            T+     +L   S + +   NF D+ +  L   L       +++S A N I+  G KA  
Sbjct: 630  TVKCLLPQLLYCSHLRLESNNFKDDVMELLGSLLSAKDCQIQKMSLAENAISNKGAKALS 689

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L +LNL  N IG +G + L + L  N  +  L L S  + + GA+A+AE+L+
Sbjct: 690  RALLVNRTLTSLNLRNNNIGSKGARFLAEALKMNQALVSLNLQSNGIDEAGAEALAEVLQ 749

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L +  N++   G   +A+AL  N T+  L +  N  G  G  ALA+ L  N +
Sbjct: 750  CNRKLVTLNMQKNIVGAGGAKRIADALKTNKTLTELMICSNQLGDKGTAALAEALTVNHT 809

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  NSI + G+ AL   LS  +G L  L++  NSI  +GA ++A+ ++   SL  
Sbjct: 810  LLSLQLQSNSISNRGMTALTKALSLNRG-LVSLNLRENSIGVEGARNMAKALQKNSSLQD 868

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  + + D+G + IA A+K N+ + ++ L  N I S    A+A  L  N+ +  LDL 
Sbjct: 869  LDLTADLLHDDGVQAIAAAIKNNQGLRSLHLQWNFIKSSATKALAHSLHFNTTMELLDLQ 928

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N +G +G   L++ LK + ++ TL L    +G  GA  +A+ L  N T+  LDLR N +
Sbjct: 929  ENAVGNEGVTFLADALKANTSLRTLCLQGVSVGTGGAIALAEALMSNQTLQTLDLRGNSV 988

Query: 512  RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
                                             ++GAK LA + K  N +L S++L  N 
Sbjct: 989  G--------------------------------MEGAKALANALK-TNRSLKSLNLQENS 1015

Query: 572  IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            +  DGA  IA A K N    +T +NL  N + + G   ++D
Sbjct: 1016 LGMDGAIFIATAFKENHQ--LTYINLQGNGIGESGAKVISD 1054



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/282 (36%), Positives = 147/282 (52%), Gaps = 1/282 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  + + +     GD+G   LAE+L  N T   +   +N I+  G+ A    L  N  L 
Sbjct: 780  KTLTELMICSNQLGDKGTAALAEALTVNHTLLSLQLQSNSISNRGMTALTKALSLNRGLV 839

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +LNL  N IG EG + +   L  N+ ++ L L++  L D+G +AIA  +KNN  LR L L
Sbjct: 840  SLNLRENSIGVEGARNMAKALQKNSSLQDLDLTADLLHDDGVQAIAAAIKNNQGLRSLHL 899

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I  S   +LA +L  N+T+  L L  N  G  G   LA  L+ N SLR L L G S
Sbjct: 900  QWNFIKSSATKALAHSLHFNTTMELLDLQENAVGNEGVTFLADALKANTSLRTLCLQGVS 959

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            +G  G  AL   L S +  L  LD+  NS+  +GA  +A  +K  +SL  +NL  N +G 
Sbjct: 960  VGTGGAIALAEALMSNQ-TLQTLDLRGNSVGMEGAKALANALKTNRSLKSLNLQENSLGM 1018

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            +GA  IA A K+N  +T I+L GN I   GA  I+  ++ N+
Sbjct: 1019 DGAIFIATAFKENHQLTYINLQGNGIGESGAKVISDTIRGNT 1060


>gi|348502188|ref|XP_003438651.1| PREDICTED: protein NLRC3 [Oreochromis niloticus]
          Length = 1130

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 153/462 (33%), Positives = 224/462 (48%), Gaps = 37/462 (8%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            T+     +L   S + +   +F D+ +  L   L       +++S A N I+  G KA  
Sbjct: 693  TVKCLLPQLLYCSHLRLENNHFKDDVMELLGSLLSAKDCHIQKISLADNAISNKGAKALS 752

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L +LNL  N IG +G K L + L  N  +  +   +  + +EGA+++AE+L+
Sbjct: 753  RALLVNRTLTSLNLRNNNIGSKGAKFLAEALKMNQVLTSINFQNNAIEEEGAQSLAEVLQ 812

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G   +AEAL  N T+  L L GN  G  G  ALA+ L  N +
Sbjct: 813  CNRKLVSLNLRKNTIAAGGAKRIAEALKTNRTLTKLILCGNQLGDKGTVALAEALAVNHT 872

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  LHL  NSI ++G+ AL   L    G L  L++  NSI  +GA ++A  +    +L  
Sbjct: 873  LLSLHLQSNSISNKGMTALTKALRLNHG-LVSLNLRENSIGVEGAKNMAHALHENNTLQD 931

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + D+G + IA A+K NR +T++ L  N I S    A+A  L  NS +  LDL 
Sbjct: 932  LDLTANLLHDDGIQAIAGAIKFNRGLTSLHLQWNFIKSTATKALAHALLSNSTMQLLDLQ 991

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N IG +G   L+E LK + ++ TL L     G SGA  +A+ L  N T+  LDLR N +
Sbjct: 992  ENAIGNEGVTFLAEALKTNASLRTLCLQGVSAGTSGAIKMAEALMTNQTLQTLDLRGNTV 1051

Query: 512  RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
                                             ++GAK LA + K  N +L S++L  N 
Sbjct: 1052 G--------------------------------MEGAKALANALK-SNRSLKSLNLQENS 1078

Query: 572  IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +  DGA  IA ALK N    +T +NL  N + + G   ++DA
Sbjct: 1079 LGMDGAIFIATALKGNHQ--LTYINLQGNGIGESGAKVISDA 1118



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 1/285 (0%)

Query: 156  EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
            E  K  R  + + + G   GD+G   LAE+L  N T   +   +N I+  G+ A    L+
Sbjct: 837  EALKTNRTLTKLILCGNQLGDKGTVALAEALAVNHTLLSLHLQSNSISNKGMTALTKALR 896

Query: 216  SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             N  L +LNL  N IG EG K +   L +N  ++ L L++  L D+G +AIA  +K N  
Sbjct: 897  LNHGLVSLNLRENSIGVEGAKNMAHALHENNTLQDLDLTANLLHDDGIQAIAGAIKFNRG 956

Query: 276  LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            L  L L  N I  +   +LA ALL NST++ L L  N  G  G   LA+ L+ N SLR L
Sbjct: 957  LTSLHLQWNFIKSTATKALAHALLSNSTMQLLDLQENAIGNEGVTFLAEALKTNASLRTL 1016

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L G S G  G   +   L + +  L  LD+  N++  +GA  +A  +K+ +SL  +NL 
Sbjct: 1017 CLQGVSAGTSGAIKMAEALMTNQ-TLQTLDLRGNTVGMEGAKALANALKSNRSLKSLNLQ 1075

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             N +G +GA  IA ALK N  +T I+L GN I   GA  I+  ++
Sbjct: 1076 ENSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIR 1120


>gi|395515531|ref|XP_003761956.1| PREDICTED: protein NLRC3 [Sarcophilus harrisii]
          Length = 1153

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/435 (33%), Positives = 221/435 (50%), Gaps = 7/435 (1%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDG 212
            L     +L    S+ +    F D  +  L   L       +++S A N I   G KA   
Sbjct: 717  LKSLLPQLLYCRSLRLDNNQFQDNVMELLGSVLSSKDCHIQKISLAENQIHNKGAKALAR 776

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
             L  N +L  L+L  N IG +G K L D L  N  +  L L +  ++DEGAK IA+ L  
Sbjct: 777  SLLVNRSLTVLDLRNNSIGPQGAKALADSLKINRVLISLSLQNNVIKDEGAKFIADALMV 836

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            N +L +L L  N I   G   +A+AL +N +++ L L+ N  G  G+ ALA+ L+ N+ L
Sbjct: 837  NHMLSMLHLQKNSIGSLGAKPIADALKKNGSLKELMLSSNSVGNDGSKALAEALKVNQGL 896

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
              L L  NSI D G+ AL   L      L+ L++  NSIS  GA  +A  +++ ++L  +
Sbjct: 897  ITLDLQSNSISDAGVAALTRALCINHTLLS-LNLRENSISPDGAQEIASALRSNQALQNL 955

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            +L  N + D+GA+ IA A+K+NR + T+ L  N I    A A+ + L+ N  +TSLDL  
Sbjct: 956  DLTANLLHDQGAQAIAAAVKENRVLRTLHLQWNFIQVNAAKALGQALQFNRSLTSLDLQE 1015

Query: 453  NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            N IG +G  AL+  LK + ++  L L    IG  GA+ + D L  N T+ ILDLR N + 
Sbjct: 1016 NAIGDEGMMALARALKMNTSLTALYLQVASIGVLGAQALGDALAVNKTLEILDLRGNSIG 1075

Query: 513  DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
                         +S++  L ++   SL ++   GA C+A +    N     I+L  N I
Sbjct: 1076 AAGAKAIANALKINSSLRML-NLQENSLGMD---GAICIATAL-TNNHGFKHINLQGNHI 1130

Query: 573  RDDGAFAIAQALKAN 587
             + GA  I++A+K N
Sbjct: 1131 GESGARMISEAIKTN 1145



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 202/383 (52%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L +  +  +GAKA+A+ LK N +L  L
Sbjct: 756  IQKISLAENQIHNKGAKALARSLLVNRSLTVLDLRNNSIGPQGAKALADSLKINRVLISL 815

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L NN+I   G   +A+AL+ N  +  LHL  N  G+LGA  +A  L+ N SL+EL L  
Sbjct: 816  SLQNNVIKDEGAKFIADALMVNHMLSMLHLQKNSIGSLGAKPIADALKKNGSLKELMLSS 875

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NS+G++G +AL   L   +G L  LD+ +NSIS  G   +   +    +LL +NL  N I
Sbjct: 876  NSVGNDGSKALAEALKVNQG-LITLDLQSNSISDAGVAALTRALCINHTLLSLNLRENSI 934

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              +GA++IA AL+ N+ +  +DL  N +H +GA AIA  +K+N V+ +L L +N I  + 
Sbjct: 935  SPDGAQEIASALRSNQALQNLDLTANLLHDQGAQAIAAAVKENRVLRTLHLQWNFIQVNA 994

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            AKAL + L+F+ ++ +L L    IG  G   +A  L+ N +++ L L+            
Sbjct: 995  AKALGQALQFNRSLTSLDLQENAIGDEGMMALARALKMNTSLTALYLQV----------- 1043

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
                   ++I  L              GA+ L  +   VN+ L  +DL  N I   GA A
Sbjct: 1044 -------ASIGVL--------------GAQALGDAL-AVNKTLEILDLRGNSIGAAGAKA 1081

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            IA ALK N  + +  LNL  N L
Sbjct: 1082 IANALKINSSLRM--LNLQENSL 1102



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 169/345 (48%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R   S+ +      DEG  F+A++L  N     +    N I + G K     L+ N +LK
Sbjct: 810  RVLISLSLQNNVIKDEGAKFIADALMVNHMLSMLHLQKNSIGSLGAKPIADALKKNGSLK 869

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L LS N +G++G K L + L  N G+  L L S  + D G  A+   L  N  L  L L
Sbjct: 870  ELMLSSNSVGNDGSKALAEALKVNQGLITLDLQSNSISDAGVAALTRALCINHTLLSLNL 929

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   +A AL  N  +++L L  N     GA A+A  ++ N+ LR LHL  N 
Sbjct: 930  RENSISPDGAQEIASALRSNQALQNLDLTANLLHDQGAQAIAAAVKENRVLRTLHLQWNF 989

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I  +G   +A  +K   SL  + L +  IG 
Sbjct: 990  IQVNAAKALGQALQFNRS-LTSLDLQENAIGDEGMMALARALKMNTSLTALYLQVASIGV 1048

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + DAL  N+T+  +DL GN+I + GA AIA  LK NS +  L+L  N +G DGA 
Sbjct: 1049 LGAQALGDALAVNKTLEILDLRGNSIGAAGAKAIANALKINSSLRMLNLQENSLGMDGAI 1108

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +     + L    IG SGA  +++ ++ N    I+++
Sbjct: 1109 CIATALTNNHGFKHINLQGNHIGESGARMISEAIKTNAPDCIVEM 1153



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 13/340 (3%)

Query: 277  RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            R L L+NN    +    L   L  ++  I+ + L  N     GA ALA+ L  N+SL  L
Sbjct: 728  RSLRLDNNQFQDNVMELLGSVLSSKDCHIQKISLAENQIHNKGAKALARSLLVNRSLTVL 787

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  NSIG +G +AL   L   +  L  L + NN I  +GA  +A+ +     L  ++L 
Sbjct: 788  DLRNNSIGPQGAKALADSLKINR-VLISLSLQNNVIKDEGAKFIADALMVNHMLSMLHLQ 846

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IG  GA+ IADALK+N ++  + L  N++ + G+ A+A  LK N  + +LDL  N I
Sbjct: 847  KNSIGSLGAKPIADALKKNGSLKELMLSSNSVGNDGSKALAEALKVNQGLITLDLQSNSI 906

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
               G  AL+  L  +  + +L L    I   GA+ +A  LR N  +  LDL AN L D+ 
Sbjct: 907  SDAGVAALTRALCINHTLLSLNLRENSISPDGAQEIASALRSNQALQNLDLTANLLHDQ- 965

Query: 516  CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIR 573
                 G     +A+   + +    L  N++Q   AK L Q+ +  N +LTS+DL  N I 
Sbjct: 966  -----GAQAIAAAVKENRVLRTLHLQWNFIQVNAAKALGQALQF-NRSLTSLDLQENAIG 1019

Query: 574  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            D+G  A+A+ALK N   ++T+L L    +   G  AL DA
Sbjct: 1020 DEGMMALARALKMN--TSLTALYLQVASIGVLGAQALGDA 1057


>gi|392331630|ref|XP_003752343.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Rattus
            norvegicus]
 gi|392351031|ref|XP_003750824.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Rattus
            norvegicus]
          Length = 1157

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 231/465 (49%), Gaps = 37/465 (7%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S++ L     +L    S+ +    F D  +  L   L G +   +++S A N I   G +
Sbjct: 717  SQRVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIQKISLAENQIGNKGAR 776

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                 L  N +L TL+L  N IG +G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 777  GLARSLLVNRSLVTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNVIKDDGVMYMAE 836

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N I+  L+L  N+I   G   +A+AL +N ++R L  + N  G  GA ALA+ L+ 
Sbjct: 837  ALVSNQIISTLQLQKNLIGPRGAQQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKV 896

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  N+I + G+  LM  L + +  L+ L++  NSIS +GA  +A+ +    +
Sbjct: 897  NQGLENLDLQSNAISNTGVAVLMRALCTNQ-TLSSLNLRENSISPEGAQALAQALCRNTT 955

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 956  LKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 1015

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR 
Sbjct: 1016 DLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRTLEILDLRG 1075

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +         G++                       GAK LA   K +N +L  ++L 
Sbjct: 1076 NDV---------GVA-----------------------GAKALANGLK-LNSSLRRLNLQ 1102

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             N +  DGA  +A AL  N    +  +NL  N + + G   ++ A
Sbjct: 1103 ENSLGMDGAIYVATALSENH--GLHHINLQGNPIGESGARMISQA 1145



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 169/345 (48%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G+ ++AE+L  NQ    +    N I   G +     L+ N +L+
Sbjct: 814  RTLTSLSLQSNVIKDDGVMYMAEALVSNQIISTLQLQKNLIGPRGAQQMADALKKNRSLR 873

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G   L + L  N G+E L L S  + + G   +   L  N  L  L L
Sbjct: 874  ELMFSSNTIGDRGAMALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNL 933

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  +LA+AL  N+T++ L L  N     GA A+A  +  N SL  LHL  N 
Sbjct: 934  RENSISPEGAQALAQALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNF 993

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 994  IQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGS 1052

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA+ + +AL  NRT+  +DL GN++   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 1053 QGAQALGEALAVNRTLEILDLRGNDVGVAGAKALANGLKLNSSLRRLNLQENSLGMDGAI 1112

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  ++ + L    IG SGA  ++  +  N     +++
Sbjct: 1113 YVATALSENHGLHHINLQGNPIGESGARMISQAIEKNAPTCTVEM 1157



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+   +  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 860  QQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDLQSNAISNTGVAVLM 919

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L +N  L +LNL  N I  EG + L   L  N  ++ L L++  L D+GA+AIA  + 
Sbjct: 920  RALCTNQTLSSLNLRENSISPEGAQALAQALCRNTTLKHLDLTANLLHDQGAQAIATAVG 979

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 980  ENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 1039

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG +G +AL   L+  +  L +LD+  N +   GA  +A  +K   SL  
Sbjct: 1040 LTALYLQVASIGSQGAQALGEALAVNR-TLEILDLRGNDVGVAGAKALANGLKLNSSLRR 1098

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL +N  +  I+L GN I   GA  I++ ++ N+   ++++
Sbjct: 1099 LNLQENSLGMDGAIYVATALSENHGLHHINLQGNPIGESGARMISQAIEKNAPTCTVEM 1157



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 148/286 (51%), Gaps = 11/286 (3%)

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            + L L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ +
Sbjct: 732  QSLRLDNNQFQDPVMELLGSVLSGKDCRIQKISLAENQIGNKGARGLARSLLVNRSLVTL 791

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            +L  N IG +GA+ +ADALK NRT+T++ L  N I   G   +A  L  N +I++L L  
Sbjct: 792  DLRSNSIGPQGAKALADALKINRTLTSLSLQSNVIKDDGVMYMAEALVSNQIISTLQLQK 851

Query: 453  NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            N IG  GA+ +++ LK + ++  L      IG  GA  +A+ L+ N  +  LDL++N + 
Sbjct: 852  NLIGPRGAQQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDLQSNAIS 911

Query: 513  DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
            +       G++    A+ + + +   +L  N +  +GA+ LAQ+    N  L  +DL  N
Sbjct: 912  N------TGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQAL-CRNTTLKHLDLTAN 964

Query: 571  EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
             + D GA AIA A+   E+ ++T L+L  NF+      AL  A  L
Sbjct: 965  LLHDQGAQAIATAV--GENCSLTHLHLQWNFIQAGAARALGQALQL 1008


>gi|449278877|gb|EMC86605.1| Protein NLRC3, partial [Columba livia]
          Length = 994

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 220/421 (52%), Gaps = 36/421 (8%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +++S A N I+  G KA    L  N +L  L+L  N IG  G K L D L  N  +  L 
Sbjct: 598 QKLSLAENQISNKGAKALARSLMVNRSLTVLDLRSNSIGPTGAKALADALKKNQVLLSLN 657

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L    ++++GA  +AE L  N  L  L L  N I   G   +AEAL +N +++ L L+ N
Sbjct: 658 LQHNVIKEDGATFLAEALLTNHRLTTLHLQKNAIGAHGARKIAEALKQNCSLKELTLSSN 717

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  G+ ALA+ L+ N SL+ L L  NSI   G+ AL  GL + KG L  L++  NSIS
Sbjct: 718 SVGDNGSVALAEALKVNHSLQSLDLQSNSISSTGVTALTLGLCANKG-LISLNLRENSIS 776

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            +G   +A  ++   +L  ++L  N + DEG + IA A+K+N+ +T++ L  N I +K A
Sbjct: 777 KEGGPAIARALRTNSTLRKLDLAANLLYDEGGKAIALAMKENQALTSLHLQWNFIQAKAA 836

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           +A+A+ L+ NS + +LDL  N IG +G  ALS  LK +  ++ L L    +GA+GA+ +A
Sbjct: 837 TALAQALQSNSSLATLDLQENAIGDEGMAALSTALKVNTTLSDLHLQVASVGATGAQALA 896

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA 552
           + L  N ++ ILDLR N +                                 + GAK +A
Sbjct: 897 EALMVNKSLQILDLRGNSIG--------------------------------VVGAKAMA 924

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            + K VN +L  ++L  N +  DGA  IA ALK N    +T +NL  N + + G   ++D
Sbjct: 925 NALK-VNRSLRRLNLQENSLGMDGAICIATALKGNH--GLTYVNLQGNRIGQSGAKMISD 981

Query: 613 A 613
           A
Sbjct: 982 A 982



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 184/372 (49%), Gaps = 27/372 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ + +D+   + G  G   LA++L  NQ    ++   N I   G       L +N  L 
Sbjct: 623 RSLTVLDLRSNSIGPTGAKALADALKKNQVLLSLNLQHNVIKEDGATFLAEALLTNHRLT 682

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL+L  N IG  G + + + L  N  ++ L LSS  + D G+ A+AE LK N  L+ L+L
Sbjct: 683 TLHLQKNAIGAHGARKIAEALKQNCSLKELTLSSNSVGDNGSVALAEALKVNHSLQSLDL 742

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G T+L   L  N  + SL+L  N     G  A+A+ L  N +LR+L L  N 
Sbjct: 743 QSNSISSTGVTALTLGLCANKGLISLNLRENSISKEGGPAIARALRTNSTLRKLDLAANL 802

Query: 342 IGDEGIRALMSGLSSRKG---------------------------KLAVLDIGNNSISAK 374
           + DEG +A+   +   +                             LA LD+  N+I  +
Sbjct: 803 LYDEGGKAIALAMKENQALTSLHLQWNFIQAKAATALAQALQSNSSLATLDLQENAIGDE 862

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   ++  +K   +L  ++L +  +G  GA+ +A+AL  N+++  +DL GN+I   GA A
Sbjct: 863 GMAALSTALKVNTTLSDLHLQVASVGATGAQALAEALMVNKSLQILDLRGNSIGVVGAKA 922

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A  LK N  +  L+L  N +G DGA  ++  LK +  +  + L   +IG SGA+ ++D 
Sbjct: 923 MANALKVNRSLRRLNLQENSLGMDGAICIATALKGNHGLTYVNLQGNRIGQSGAKMISDA 982

Query: 495 LRYNNTISILDL 506
           +R N+   ++D+
Sbjct: 983 IRTNSPDCVVDV 994



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 1/288 (0%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K+  +   + +S  + GD G   LAE+L  N + + +   +N I++ G+ A    L 
Sbjct: 701 EALKQNCSLKELTLSSNSVGDNGSVALAEALKVNHSLQSLDLQSNSISSTGVTALTLGLC 760

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +N  L +LNL  N I  EG   +   L  N+ + +L L++  L DEG KAIA  +K N  
Sbjct: 761 ANKGLISLNLRENSISKEGGPAIARALRTNSTLRKLDLAANLLYDEGGKAIALAMKENQA 820

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L L  N I     T+LA+AL  NS++ +L L  N  G  G  AL+  L+ N +L +L
Sbjct: 821 LTSLHLQWNFIQAKAATALAQALQSNSSLATLDLQENAIGDEGMAALSTALKVNTTLSDL 880

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           HL   S+G  G +AL   L   K  L +LD+  NSI   GA  +A  +K  +SL  +NL 
Sbjct: 881 HLQVASVGATGAQALAEALMVNKS-LQILDLRGNSIGVVGAKAMANALKVNRSLRRLNLQ 939

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            N +G +GA  IA ALK N  +T ++L GN I   GA  I+  ++ NS
Sbjct: 940 ENSLGMDGAICIATALKGNHGLTYVNLQGNRIGQSGAKMISDAIRTNS 987



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 179/345 (51%), Gaps = 23/345 (6%)

Query: 261 EGAKAIAELLKNNSILRVL-ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           E AKA+ E +KN S+  +L  +N + + Y     +++  +E +         N    L  
Sbjct: 507 EIAKAVEEAMKNESLAGMLTPVNCSALAY--LLQVSDVCVEET---------NLSSCLTY 555

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N     L      + L L  N   D  +  L S LS +  ++  L +  N IS KGA  +
Sbjct: 556 NVCKSLLPQLLFCQNLRLDNNQFKDNVMELLGSMLSVKDCQIQKLSLAENQISNKGAKAL 615

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  +   +SL  ++L  N IG  GA+ +ADALK+N+ + +++L  N I   GA+ +A  L
Sbjct: 616 ARSLMVNRSLTVLDLRSNSIGPTGAKALADALKKNQVLLSLNLQHNVIKEDGATFLAEAL 675

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N  +T+L L  N IGA GA+ ++E LK + ++  L L    +G +G+  +A+ L+ N+
Sbjct: 676 LTNHRLTTLHLQKNAIGAHGARKIAEALKQNCSLKELTLSSNSVGDNGSVALAEALKVNH 735

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKV 557
           ++  LDL++N +     +G   L+     + + K ++  +L  N +  +G   +A++ + 
Sbjct: 736 SLQSLDLQSNSISS---TGVTALTL---GLCANKGLISLNLRENSISKEGGPAIARALR- 788

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            N  L  +DLA N + D+G  AIA A+K N+  A+TSL+L  NF+
Sbjct: 789 TNSTLRKLDLAANLLYDEGGKAIALAMKENQ--ALTSLHLQWNFI 831


>gi|449475581|ref|XP_002192566.2| PREDICTED: protein NLRC3 [Taeniopygia guttata]
          Length = 1007

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 154/448 (34%), Positives = 225/448 (50%), Gaps = 36/448 (8%)

Query: 166 SVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S+ +    F D+ +  L   L G +   + +S A N I+  G KA    L  N +L  L+
Sbjct: 582 SLRLDNNQFKDDVMELLGSVLSGKDCQIQRLSLAENQISNKGAKALARSLLVNRSLMVLD 641

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG  G K L D L  N  +  L L    ++++GA  +AE L  N  L  L L  N
Sbjct: 642 LRSNSIGPTGAKALADALKKNQILLSLNLQHNSIKEDGATFLAEALLTNHRLVTLHLQKN 701

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G   +AEAL +N ++R L L+ N  G  G+ ALA+ L  N SL+ L L  NSI  
Sbjct: 702 GIGAQGTRKMAEALKQNCSLRELILSSNSVGDNGSIALAEALRVNHSLQSLDLQSNSISS 761

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G+ AL + L S KG L+ L++  NSIS +G   +A  +++  +L  ++L  N + D+G 
Sbjct: 762 AGVTALTAALCSNKGLLS-LNLRENSISKEGGPAIARALRSNSTLRKLDLAANLLHDDGG 820

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IA A+ +NR +T++ L  N I +K A+A+A+ L+ NS + SLDL  N IG +G  ALS
Sbjct: 821 KAIASAIGENRALTSLHLQWNFIQAKAATALAQALQSNSSLASLDLQENAIGDEGVAALS 880

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
             LK +  +  L L    +G +GA+ +A+ L  N ++ ILDLR N L             
Sbjct: 881 AALKVNTTLADLHLQVASVGVAGAQALAEALMVNKSLQILDLRGNSLGPA---------- 930

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                 GAK +A + K VN +L  + L  N +  DGA  IA AL
Sbjct: 931 ----------------------GAKAVANALK-VNRSLRWLKLQENSLGMDGAICIATAL 967

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTD 612
           K N  +  TS NL  N + + G   ++D
Sbjct: 968 KGNHGL-TTSSNLQGNRIGQSGAKMISD 994



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 184/373 (49%), Gaps = 28/373 (7%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+   +D+   + G  G   LA++L  NQ    ++   N I   G       L +N  L 
Sbjct: 635  RSLMVLDLRSNSIGPTGAKALADALKKNQILLSLNLQHNSIKEDGATFLAEALLTNHRLV 694

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL+L  N IG +G + + + L  N  +  L LSS  + D G+ A+AE L+ N  L+ L+L
Sbjct: 695  TLHLQKNGIGAQGTRKMAEALKQNCSLRELILSSNSVGDNGSIALAEALRVNHSLQSLDL 754

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G T+L  AL  N  + SL+L  N     G  A+A+ L  N +LR+L L  N 
Sbjct: 755  QSNSISSAGVTALTAALCSNKGLLSLNLRENSISKEGGPAIARALRSNSTLRKLDLAANL 814

Query: 342  IGDEGIRALMSGLSSRKG---------------------------KLAVLDIGNNSISAK 374
            + D+G +A+ S +   +                             LA LD+  N+I  +
Sbjct: 815  LHDDGGKAIASAIGENRALTSLHLQWNFIQAKAATALAQALQSNSSLASLDLQENAIGDE 874

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   ++  +K   +L  ++L +  +G  GA+ +A+AL  N+++  +DL GN++   GA A
Sbjct: 875  GVAALSAALKVNTTLADLHLQVASVGVAGAQALAEALMVNKSLQILDLRGNSLGPAGAKA 934

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVAD 493
            +A  LK N  +  L L  N +G DGA  ++  LK  HG   +  L   +IG SGA+ ++D
Sbjct: 935  VANALKVNRSLRWLKLQENSLGMDGAICIATALKGNHGLTTSSNLQGNRIGQSGAKMISD 994

Query: 494  MLRYNNTISILDL 506
             +R N+   ++D+
Sbjct: 995  TIRSNSPDCVVDV 1007



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 176/359 (49%), Gaps = 13/359 (3%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-EN 301
           V +  +E   LSS    +     +++LL  +S    L L+NN         L   L  ++
Sbjct: 551 VSDVCMEETNLSSCLTYNVCKSLLSQLLFCHS----LRLDNNQFKDDVMELLGSVLSGKD 606

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             I+ L L  N     GA ALA+ L  N+SL  L L  NSIG  G +AL   L   +  L
Sbjct: 607 CQIQRLSLAENQISNKGAKALARSLLVNRSLMVLDLRSNSIGPTGAKALADALKKNQILL 666

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           + L++ +NSI   GA  +AE +     L+ ++L  N IG +G  K+A+ALKQN ++  + 
Sbjct: 667 S-LNLQHNSIKEDGATFLAEALLTNHRLVTLHLQKNGIGAQGTRKMAEALKQNCSLRELI 725

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N++   G+ A+A  L+ N  + SLDL  N I + G  AL+  L  +  + +L L   
Sbjct: 726 LSSNSVGDNGSIALAEALRVNHSLQSLDLQSNSISSAGVTALTAALCSNKGLLSLNLREN 785

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
            I   G   +A  LR N+T+  LDL AN L D+      G     SAI   + +    L 
Sbjct: 786 SISKEGGPAIARALRSNSTLRKLDLAANLLHDD------GGKAIASAIGENRALTSLHLQ 839

Query: 542 INYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            N++Q     A +  +  N +L S+DL  N I D+G  A++ ALK N  +A   L +A+
Sbjct: 840 WNFIQAKAATALAQALQSNSSLASLDLQENAIGDEGVAALSAALKVNTTLADLHLQVAS 898


>gi|46445898|ref|YP_007263.1| hypothetical protein pc0264 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46399539|emb|CAF22988.1| hypothetical protein pc0264 [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1805

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 215/462 (46%), Gaps = 36/462 (7%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F+SV++S +   D G   LA SL  N T + +    N I+  G +A    L SN AL+TL
Sbjct: 1342 FASVNLSNQKISDRGAEVLAHSLASNTTLKSLDLDRNQISDKGAEAIAQALASNAALETL 1401

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             L+GN I D+G + +   L  NA + +L L+   + D+G +A A+ L +N+IL  L LN 
Sbjct: 1402 WLNGNQISDKGAEAIAQSLASNAALWKLSLNGNQISDQGMEAFAQALASNTILMDLSLNG 1461

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N I   G  + A+AL  N++IR L LN N        A A+ L  N S+  L L+GN I 
Sbjct: 1462 NQISDQGMKAFAQALASNTSIRVLSLNENQISDKEMEAFAQALASNTSIGVLSLNGNQIS 1521

Query: 344  DEGIRALMSGLSSR---------------KG------------KLAVLDIGNNSISAKGA 376
            D+G+ A    L+S                KG             + VL +  N IS KG 
Sbjct: 1522 DKGMEAFAQALASNTTLRTLRLDNNQISDKGMEAFAQALASNTSIGVLSLNGNQISDKGI 1581

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              +A+ + +   L  ++L  N I D+G E  A AL  N  +  + L  N I  KG  A A
Sbjct: 1582 VALAQALASNTILSELSLNENQISDQGMEAFAQALASNTALRALRLDNNQISDKGMEAFA 1641

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            + L  N++++ L L  N I   G +A ++ L  +  +  L+L   QI   G E  A  L 
Sbjct: 1642 QALASNTILSELSLNGNQISDQGMEAFAQALASNITLRALRLDNNQISDQGMEAFAQTLA 1701

Query: 497  YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQS 554
             N T+  L L  N + D+      G+  F   + S   +   SL  N +  QG K  AQ+
Sbjct: 1702 SNTTLRALRLDNNQISDK------GMEAFAQTMASNTSIRVLSLNGNQISDQGMKAFAQT 1755

Query: 555  FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
              V N  L  + L  N+I D    A AQ L +N  V    LN
Sbjct: 1756 L-VSNTILMDLSLNGNQISDKRMKAFAQTLASNTAVGWFRLN 1796



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 189/381 (49%), Gaps = 14/381 (3%)

Query: 232  DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            D G+  L  + +++     + LS+  + D GA+ +A  L +N+ L+ L+L+ N I   G 
Sbjct: 1328 DSGI--LLQLYMNDPKFASVNLSNQKISDRGAEVLAHSLASNTTLKSLDLDRNQISDKGA 1385

Query: 292  TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             ++A+AL  N+ + +L LNGN     GA A+A+ L  N +L +L L+GN I D+G+ A  
Sbjct: 1386 EAIAQALASNAALETLWLNGNQISDKGAEAIAQSLASNAALWKLSLNGNQISDQGMEAFA 1445

Query: 352  SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
              L+S    L  L +  N IS +G    A+ + +  S+  ++L  N I D+  E  A AL
Sbjct: 1446 QALAS-NTILMDLSLNGNQISDQGMKAFAQALASNTSIRVLSLNENQISDKEMEAFAQAL 1504

Query: 412  KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
              N +I  + L GN I  KG  A A+ L  N+ + +L L  N I   G +A ++ L  + 
Sbjct: 1505 ASNTSIGVLSLNGNQISDKGMEAFAQALASNTTLRTLRLDNNQISDKGMEAFAQALASNT 1564

Query: 472  NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYS 531
            +I  L L   QI   G   +A  L  N  +S L L  N + D+      G+  F  A+ S
Sbjct: 1565 SIGVLSLNGNQISDKGIVALAQALASNTILSELSLNENQISDQ------GMEAFAQALAS 1618

Query: 532  LKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 589
               +    L  N +  +G +  AQ+    N  L+ + L  N+I D G  A AQAL +N  
Sbjct: 1619 NTALRALRLDNNQISDKGMEAFAQAL-ASNTILSELSLNGNQISDQGMEAFAQALASN-- 1675

Query: 590  VAVTSLNLANNFLTKFGQSAL 610
            + + +L L NN ++  G  A 
Sbjct: 1676 ITLRALRLDNNQISDQGMEAF 1696



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 3/196 (1%)

Query: 150  SKQTLNEFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            S Q +  FA+ L    A  ++ +      D+G+   A++L  N    E+S   N I+  G
Sbjct: 1605 SDQGMEAFAQALASNTALRALRLDNNQISDKGMEAFAQALASNTILSELSLNGNQISDQG 1664

Query: 207  IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            ++AF   L SNI L+ L L  N I D+G++     L  N  +  L+L +  + D+G +A 
Sbjct: 1665 MEAFAQALASNITLRALRLDNNQISDQGMEAFAQTLASNTTLRALRLDNNQISDKGMEAF 1724

Query: 267  AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            A+ + +N+ +RVL LN N I   G  + A+ L+ N+ +  L LNGN        A A+ L
Sbjct: 1725 AQTMASNTSIRVLSLNGNQISDQGMKAFAQTLVSNTILMDLSLNGNQISDKRMKAFAQTL 1784

Query: 327  EGNKSLRELHLHGNSI 342
              N ++    L+G  I
Sbjct: 1785 ASNTAVGWFRLNGQVI 1800


>gi|327286098|ref|XP_003227768.1| PREDICTED: protein NLRC3-like [Anolis carolinensis]
          Length = 1002

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 148/442 (33%), Positives = 220/442 (49%), Gaps = 37/442 (8%)

Query: 173 NFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
            F D  +  L   L G +   +++S A N I   G KA    L  N +L  L+L  N IG
Sbjct: 585 QFKDNAMDLLGSILSGKDCQIQKISLAENQIGNKGAKALARSLMVNRSLVALDLRSNSIG 644

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            +G K + D L  N  +  L L +  ++++GAK++AE L NN  L  L+L  N I   G 
Sbjct: 645 PKGAKAIADALKINQSLLSLNLENNTMKEDGAKSLAEALVNNHTLMTLQLQKNSIGPQGS 704

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +AEAL +N +++ L L+ N  G +GA AL +GL+ N SL  L L  NSI D G  AL 
Sbjct: 705 KKIAEALKKNWSLKELLLSSNCVGDVGAVALGEGLKINHSLLTLDLQSNSISDAGATALT 764

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L S +G L  L +  NSIS +GA  +   ++  + L  ++L  N + DEG + IA AL
Sbjct: 765 RALCSNQG-LTRLSLRENSISPEGAREIGIALQANRCLGNLDLAANLLHDEGVQAIALAL 823

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           K N+T+ ++ L  N I S  A  +++ L+ N+ +  LDL  N IG +G  AL+  L+ + 
Sbjct: 824 KANQTLASLHLQWNFIQSNAAKTLSQALQFNNSLEVLDLQENAIGDEGIVALALALRVNS 883

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYS 531
            +  L L    IG  GA  + + L  N ++++LDLR N +                    
Sbjct: 884 TLTALYLQATLIGERGAVALGEALSVNKSLAVLDLRGNAIG------------------- 924

Query: 532 LKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
                        L GAK +A + KV N  L  ++L  N +  DGA  IA AL  +   +
Sbjct: 925 -------------LAGAKAMAGALKV-NGTLRRLNLQENLLGMDGAICIATALTRSH--S 968

Query: 592 VTSLNLANNFLTKFGQSALTDA 613
           +T +NL  N + + G   +TDA
Sbjct: 969 LTYINLQGNRIGESGAKVITDA 990



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 177/345 (51%), Gaps = 18/345 (5%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL------ENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           ++L  NN  +DY+ F   A  LL      ++  I+ + L  N  G  GA ALA+ L  N+
Sbjct: 572 QLLYCNNLRLDYNQFKDNAMDLLGSILSGKDCQIQKISLAENQIGNKGAKALARSLMVNR 631

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SL  L L  NSIG +G +A+   L   +  L+ L++ NN++   GA  +AE + N  +L+
Sbjct: 632 SLVALDLRSNSIGPKGAKAIADALKINQSLLS-LNLENNTMKEDGAKSLAEALVNNHTLM 690

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L  N IG +G++KIA+ALK+N ++  + L  N +   GA A+   LK N  + +LDL
Sbjct: 691 TLQLQKNSIGPQGSKKIAEALKKNWSLKELLLSSNCVGDVGAVALGEGLKINHSLLTLDL 750

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             N I   GA AL+  L  +  +  L L    I   GA  +   L+ N  +  LDL AN 
Sbjct: 751 QSNSISDAGATALTRALCSNQGLTRLSLRENSISPEGAREIGIALQANRCLGNLDLAANL 810

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLA 568
           L DE      G+     A+ + + +    L  N++Q   AK L+Q+ +  N +L  +DL 
Sbjct: 811 LHDE------GVQAIALALKANQTLASLHLQWNFIQSNAAKTLSQALQF-NNSLEVLDLQ 863

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            N I D+G  A+A AL+ N    +T+L L    + + G  AL +A
Sbjct: 864 ENAIGDEGIVALALALRVNS--TLTALYLQATLIGERGAVALGEA 906



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 1/302 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++ +   + G +G   +AE+L  N + +E+  ++N +   G  A    L+ N +L TL+L
Sbjct: 691 TLQLQKNSIGPQGSKKIAEALKKNWSLKELLLSSNCVGDVGAVALGEGLKINHSLLTLDL 750

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N I D G   L   L  N G+ RL L    +  EGA+ I   L+ N  L  L+L  N+
Sbjct: 751 QSNSISDAGATALTRALCSNQGLTRLSLRENSISPEGAREIGIALQANRCLGNLDLAANL 810

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +   G  ++A AL  N T+ SLHL  N+  +  A  L++ L+ N SL  L L  N+IGDE
Sbjct: 811 LHDEGVQAIALALKANQTLASLHLQWNFIQSNAAKTLSQALQFNNSLEVLDLQENAIGDE 870

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           GI AL   L      L  L +    I  +GA  + E +   KSL  ++L  N IG  GA+
Sbjct: 871 GIVALALALRV-NSTLTALYLQATLIGERGAVALGEALSVNKSLAVLDLRGNAIGLAGAK 929

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A ALK N T+  ++L  N +   GA  IA  L  +  +T ++L  N IG  GAK +++
Sbjct: 930 AMAGALKVNGTLRRLNLQENLLGMDGAICIATALTRSHSLTYINLQGNRIGESGAKVITD 989

Query: 466 VL 467
            +
Sbjct: 990 AI 991



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 1/337 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++  S+++      ++G   LAE+L  N T   +    N I   G K     L+ N +LK
Sbjct: 659 QSLLSLNLENNTMKEDGAKSLAEALVNNHTLMTLQLQKNSIGPQGSKKIAEALKKNWSLK 718

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L LS N +GD G   L + L  N  +  L L S  + D GA A+   L +N  L  L L
Sbjct: 719 ELLLSSNCVGDVGAVALGEGLKINHSLLTLDLQSNSISDAGATALTRALCSNQGLTRLSL 778

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G   +  AL  N  + +L L  N     G  A+A  L+ N++L  LHL  N 
Sbjct: 779 RENSISPEGAREIGIALQANRCLGNLDLAANLLHDEGVQAIALALKANQTLASLHLQWNF 838

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I     + L   L      L VLD+  N+I  +G   +A  ++   +L  + L    IG+
Sbjct: 839 IQSNAAKTLSQALQF-NNSLEVLDLQENAIGDEGIVALALALRVNSTLTALYLQATLIGE 897

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA  + +AL  N+++  +DL GN I   GA A+A  LK N  +  L+L  N +G DGA 
Sbjct: 898 RGAVALGEALSVNKSLAVLDLRGNAIGLAGAKAMAGALKVNGTLRRLNLQENLLGMDGAI 957

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            ++  L    ++  + L   +IG SGA+ + D +  N
Sbjct: 958 CIATALTRSHSLTYINLQGNRIGESGAKVITDAICTN 994



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 67/151 (44%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +TL++  +   +   +D+     GDEG+  LA +L  N T   +   A  I   G  A  
Sbjct: 845 KTLSQALQFNNSLEVLDLQENAIGDEGIVALALALRVNSTLTALYLQATLIGERGAVALG 904

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N +L  L+L GN IG  G K +   L  N  + RL L    L  +GA  IA  L 
Sbjct: 905 EALSVNKSLAVLDLRGNAIGLAGAKAMAGALKVNGTLRRLNLQENLLGMDGAICIATALT 964

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            +  L  + L  N I  SG   + +A+  N+
Sbjct: 965 RSHSLTYINLQGNRIGESGAKVITDAICTNA 995


>gi|428176268|gb|EKX45153.1| hypothetical protein GUITHDRAFT_94709 [Guillardia theta CCMP2712]
          Length = 605

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 142/442 (32%), Positives = 224/442 (50%), Gaps = 36/442 (8%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  S+ +   N GDE    +  +L  N T   +  + N I A G  A    LQ+N  + +
Sbjct: 132 SIHSLYLDNNNAGDEFGKDMGVTLTMNSTLRFLDLSDNDIKATGAMALAKALQNNSVVTS 191

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           +N+S N I +EG   +  +L+ N  +++L++S   + D GA  +A++L  NS LR+ ++ 
Sbjct: 192 MNISRNNIANEGATEIARMLLTNTSLQQLRMSWNTINDGGAHELAKVLSENSTLRLFDIA 251

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N +   G T LA+AL  N++I +LHL+GN     GA  +A  L  NKSL+EL+L  N I
Sbjct: 252 DNRVSSVGATELAKALRVNNSITALHLSGNGIAGPGAQEVAAALHVNKSLQELYLAWNCI 311

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            + G +AL   L      L  LD+G                             N IG E
Sbjct: 312 VEHGAKALADALCENT-TLTTLDMG----------------------------ANGIGKE 342

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA AL QN T+  + L GN +  +G   IA+ L+ N  +  LDL  N IG +  K 
Sbjct: 343 GASHIARALTQNTTLKVLHLHGNVLKEEGPKQIAKALQTNKFLEFLDLDGNEIGVNNIKE 402

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           L+E +K + ++ TLKL   +I   GA  +A+ L+ N +++ LDL  N + +   +G N  
Sbjct: 403 LAESVKINCSLQTLKLARNKINDIGAWELAEALKINRSLTKLDLTRNNVEETGATGLNDC 462

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
              ++ +  L H+ +  +      GA  +AQ+   VN  L ++ +A N+I D GA  IA+
Sbjct: 463 LHINNTLREL-HLSYNKI---KETGAMSIAQAIN-VNTTLHTLLIADNDIPDAGAMKIAE 517

Query: 583 ALKANEDVAVTSLNLANNFLTK 604
           AL AN    + +L+L  N ++K
Sbjct: 518 ALAANS--TIHTLDLLGNTISK 537



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 147/470 (31%), Positives = 230/470 (48%), Gaps = 23/470 (4%)

Query: 152 QTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           + +NE    L      S V M G   G  G+  +A ++  N     V  ++NG+   G  
Sbjct: 6   EMVNEMVSRLNCGEHLSEVKMPGCLIGKTGIAQVATAIQSNPHVRYVDLSSNGLNEYGAT 65

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+   +L++L+L  N I   G + L   +  N+ +  L LS   + D G + IA 
Sbjct: 66  QISQFLRVTNSLRSLSLDDNSIKTAGAEELSKAIETNSNLHILHLSCNRIEDAGCRMIAL 125

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L+NN+ +  L L+NN         +   L  NST+R L L+ N   A GA ALAK L+ 
Sbjct: 126 ALRNNNSIHSLYLDNNNAGDEFGKDMGVTLTMNSTLRFLDLSDNDIKATGAMALAKALQN 185

Query: 329 NKSLRELHLHGNSIGDEG----IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           N  +  +++  N+I +EG     R L++  S     L  L +  N+I+  GA  +A+ + 
Sbjct: 186 NSVVTSMNISRNNIANEGATEIARMLLTNTS-----LQQLRMSWNTINDGGAHELAKVLS 240

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
              +L   ++  N +   GA ++A AL+ N +IT + L GN I   GA  +A  L  N  
Sbjct: 241 ENSTLRLFDIADNRVSSVGATELAKALRVNNSITALHLSGNGIAGPGAQEVAAALHVNKS 300

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L LA+N I   GAKAL++ L  +  + TL +G   IG  GA  +A  L  N T+ +L
Sbjct: 301 LQELYLAWNCIVEHGAKALADALCENTTLTTLDMGANGIGKEGASHIARALTQNTTLKVL 360

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEAL 562
            L  N L++E      G      A+ + K + F  L  N +     K LA+S K +N +L
Sbjct: 361 HLHGNVLKEE------GPKQIAKALQTNKFLEFLDLDGNEIGVNNIKELAESVK-INCSL 413

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            ++ LA N+I D GA+ +A+ALK N   ++T L+L  N + + G + L D
Sbjct: 414 QTLKLARNKINDIGAWELAEALKINR--SLTKLDLTRNNVEETGATGLND 461



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 187/363 (51%), Gaps = 6/363 (1%)

Query: 157 FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+     +S+++S  N  +EG   +A  L  N + +++  + N I   G      V
Sbjct: 179 LAKALQNNSVVTSMNISRNNIANEGATEIARMLLTNTSLQQLRMSWNTINDGGAHELAKV 238

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  L+  +++ N +   G   L   L  N  +  L LS   +   GA+ +A  L  N
Sbjct: 239 LSENSTLRLFDIADNRVSSVGATELAKALRVNNSITALHLSGNGIAGPGAQEVAAALHVN 298

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L+ L L  N I   G  +LA+AL EN+T+ +L +  N  G  GA+ +A+ L  N +L+
Sbjct: 299 KSLQELYLAWNCIVEHGAKALADALCENTTLTTLDMGANGIGKEGASHIARALTQNTTLK 358

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWI 392
            LHLHGN + +EG + +   L + K  L  LD+  N I       +AE +K NC SL  +
Sbjct: 359 VLHLHGNVLKEEGPKQIAKALQTNKF-LEFLDLDGNEIGVNNIKELAESVKINC-SLQTL 416

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N I D GA ++A+ALK NR++T +DL  NN+   GA+ +   L  N+ +  L L+Y
Sbjct: 417 KLARNKINDIGAWELAEALKINRSLTKLDLTRNNVEETGATGLNDCLHINNTLRELHLSY 476

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   GA ++++ +  +  ++TL +    I  +GA  +A+ L  N+TI  LDL  N + 
Sbjct: 477 NKIKETGAMSIAQAINVNTTLHTLLIADNDIPDAGAMKIAEALAANSTIHTLDLLGNTIS 536

Query: 513 DEV 515
            +V
Sbjct: 537 KKV 539



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 170/344 (49%), Gaps = 4/344 (1%)

Query: 156 EFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E A+ L   +S+    MS     D G   LA+ L  N T      A N +++ G      
Sbjct: 206 EIARMLLTNTSLQQLRMSWNTINDGGAHELAKVLSENSTLRLFDIADNRVSSVGATELAK 265

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L+ N ++  L+LSGN I   G + +   L  N  ++ L L+   + + GAKA+A+ L  
Sbjct: 266 ALRVNNSITALHLSGNGIAGPGAQEVAAALHVNKSLQELYLAWNCIVEHGAKALADALCE 325

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L++  N I   G + +A AL +N+T++ LHL+GN     G   +AK L+ NK L
Sbjct: 326 NTTLTTLDMGANGIGKEGASHIARALTQNTTLKVLHLHGNVLKEEGPKQIAKALQTNKFL 385

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L GN IG   I+ L   +      L  L +  N I+  GA+ +AE +K  +SL  +
Sbjct: 386 EFLDLDGNEIGVNNIKELAESVKI-NCSLQTLKLARNKINDIGAWELAEALKINRSLTKL 444

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N++ + GA  + D L  N T+  + L  N I   GA +IA+ +  N+ + +L +A 
Sbjct: 445 DLTRNNVEETGATGLNDCLHINNTLRELHLSYNKIKETGAMSIAQAINVNTTLHTLLIAD 504

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           N I   GA  ++E L  +  I+TL L    I     E +  ++R
Sbjct: 505 NDIPDAGAMKIAEALAANSTIHTLDLLGNTISKKVEELLDQIMR 548



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 156 EFAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK LR   + +++ +SG      G   +A +L  N++ +E+  A N I   G KA   
Sbjct: 262 ELAKALRVNNSITALHLSGNGIAGPGAQEVAAALHVNKSLQELYLAWNCIVEHGAKALAD 321

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L  N  L TL++  N IG EG   +   L  N  ++ L L    L++EG K IA+ L+ 
Sbjct: 322 ALCENTTLTTLDMGANGIGKEGASHIARALTQNTTLKVLHLHGNVLKEEGPKQIAKALQT 381

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L  L+L+ N I  +    LAE++  N ++++L L  N    +GA  LA+ L+ N+SL
Sbjct: 382 NKFLEFLDLDGNEIGVNNIKELAESVKINCSLQTLKLARNKINDIGAWELAEALKINRSL 441

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            +L L  N++ + G   L   L      L  L +  N I   GA  +A+ I    +L  +
Sbjct: 442 TKLDLTRNNVEETGATGLNDCLHI-NNTLRELHLSYNKIKETGAMSIAQAINVNTTLHTL 500

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            +  NDI D GA KIA+AL  N TI T+DL GN I  K    + +++++ S   ++
Sbjct: 501 LIADNDIPDAGAMKIAEALAANSTIHTLDLLGNTISKKVEELLDQIMRNTSAYVTI 556


>gi|432924330|ref|XP_004080575.1| PREDICTED: protein NLRC3-like [Oryzias latipes]
          Length = 1133

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 223/462 (48%), Gaps = 37/462 (8%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            T+     +L   S + +   NF D+ +  L   L       +++S A N I+  G KA  
Sbjct: 696  TVKSLLPQLLYCSHLRLENNNFKDDVMELLGSLLSAKDCHIQKLSLADNAISNKGAKALS 755

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L  LNL  N IG +G K L + L  N  +  +   +  + +EGA+A+AE+L+
Sbjct: 756  RALLVNRTLTYLNLRNNNIGSKGAKFLAEALKMNQVLTSINFQNNSIEEEGAQALAEVLQ 815

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L +  N I   G   +A+AL  N T+  L L  N  G  G  ALA+ L+ N++
Sbjct: 816  CNRKLVSLNVRKNKIGADGAKRIADALKMNQTLTKLILCSNQLGDKGTVALAEALKLNQT 875

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  NSI + G+ AL   L    G L  L++  NSI  +GA ++A+ +K   SL  
Sbjct: 876  LLSLQLQSNSISNRGMTALTKALRFNHG-LVTLNLRENSIGIEGAKNMAQALKENNSLQN 934

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + DEG + I+ A+K N+ +T++ L  N I S     +A  L  N+ I  LDL 
Sbjct: 935  LDLTANLLHDEGVQAISAAIKFNQGLTSLHLQWNFIKSTATKVLANALMSNATIKLLDLQ 994

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N IG +G   L+E LK + ++ TL L     G SGA  +A+ L  N ++  LDLR N +
Sbjct: 995  ENAIGNEGVIFLAEALKVNTSLQTLCLQGVSAGTSGAVALAEALMENQSLQTLDLRGNSI 1054

Query: 512  RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
                                             ++GAK LA + K  N +L S++L  N 
Sbjct: 1055 G--------------------------------MEGAKALANALK-CNRSLKSLNLQENS 1081

Query: 572  IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +  DGA  IA ALK N  +A   +NL  N + + G   ++DA
Sbjct: 1082 LGMDGAIFIATALKGNHQLAY--INLQGNGIGESGAKVISDA 1121



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/289 (35%), Positives = 149/289 (51%), Gaps = 1/289 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  + + +     GD+G   LAE+L  NQT   +   +N I+  G+ A    L+ N  L 
Sbjct: 846  QTLTKLILCSNQLGDKGTVALAEALKLNQTLLSLQLQSNSISNRGMTALTKALRFNHGLV 905

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TLNL  N IG EG K +   L +N  ++ L L++  L DEG +AI+  +K N  L  L L
Sbjct: 906  TLNLRENSIGIEGAKNMAQALKENNSLQNLDLTANLLHDEGVQAISAAIKFNQGLTSLHL 965

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I  +    LA AL+ N+TI+ L L  N  G  G   LA+ L+ N SL+ L L G S
Sbjct: 966  QWNFIKSTATKVLANALMSNATIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLCLQGVS 1025

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
             G  G  AL   L   +  L  LD+  NSI  +GA  +A  +K  +SL  +NL  N +G 
Sbjct: 1026 AGTSGAVALAEALMENQS-LQTLDLRGNSIGMEGAKALANALKCNRSLKSLNLQENSLGM 1084

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +GA  IA ALK N  +  I+L GN I   GA  I+  ++  ++   +D+
Sbjct: 1085 DGAIFIATALKGNHQLAYINLQGNGIGESGAKVISDAIRATALSCVVDI 1133



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  + + +  KE  +  ++D++     DEG+  ++ ++ +NQ    +    N I +   K
Sbjct: 917  EGAKNMAQALKENNSLQNLDLTANLLHDEGVQAISAAIKFNQGLTSLHLQWNFIKSTATK 976

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                 L SN  +K L+L  N IG+EGV  L + L  N  ++ L L  V     GA A+AE
Sbjct: 977  VLANALMSNATIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLCLQGVSAGTSGAVALAE 1036

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L+ L+L  N I   G  +LA AL  N +++SL+L  N  G  GA  +A  L+G
Sbjct: 1037 ALMENQSLQTLDLRGNSIGMEGAKALANALKCNRSLKSLNLQENSLGMDGAIFIATALKG 1096

Query: 329  NKSLRELHLHGNSIGDEGIRAL 350
            N  L  ++L GN IG+ G + +
Sbjct: 1097 NHQLAYINLQGNGIGESGAKVI 1118


>gi|426255089|ref|XP_004021197.1| PREDICTED: protein NLRC3 [Ovis aries]
          Length = 1048

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 207/384 (53%), Gaps = 13/384 (3%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 670  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 729

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I   G  S+AEAL  N T+  LHL  N  G +G   +A  L+ N+SL+EL L  
Sbjct: 730  SLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELILQS 789

Query: 340  NSIGDEGIRALMSGLSSRKGKLAV--------LDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            NSI D G+ A +  L +    LA+        L++  NSI  +GA  +A  ++   +L  
Sbjct: 790  NSISDPGVAAPLGALRTNPKLLALCTNQTLLSLNLRENSIGPEGARDLAGALRTNSTLKS 849

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + D+GA+ +A+A+++N  +T++ L  N I +  A A+ + L+ N+ +TSLDL 
Sbjct: 850  LDLTANLLHDQGAQAVAEAVRENCALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQ 909

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR N +
Sbjct: 910  ENAIGDEGASAVASALKVNTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTI 969

Query: 512  RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
              EV +G   L+       SL+ +      +  ++GA C+A +    N  L  I+L  N 
Sbjct: 970  --EV-AGAKALANALKVNSSLRRLNLQENSLG-MEGAICVATALS-GNHGLRHINLQGNH 1024

Query: 572  IRDDGAFAIAQALKANEDVAVTSL 595
            I + GA  I++A+K N  +    +
Sbjct: 1025 IGESGARMISEAIKTNAPLCTVEM 1048



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 170/354 (48%), Gaps = 38/354 (10%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 724  RTLASLSLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLK 783

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERL----QLSSVDLRD-----EGAKAIAELLKN 272
             L L  N I D GV      L  N  +  L     L S++LR+     EGA+ +A  L+ 
Sbjct: 784  ELILQSNSISDPGVAAPLGALRTNPKLLALCTNQTLLSLNLRENSIGPEGARDLAGALRT 843

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            NS L+ L+L  N++   G  ++AEA+ EN  + SLHL  N+  A  A AL + L+ N SL
Sbjct: 844  NSTLKSLDLTANLLHDQGAQAVAEAVRENCALTSLHLQWNFIQAGAAKALGQALQLNTSL 903

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
              L L  N+IGDEG  A+ S L             N +++A                  +
Sbjct: 904  TSLDLQENAIGDEGASAVASALKV-----------NTALTA------------------L 934

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
             L +  IG  GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  
Sbjct: 935  YLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIEVAGAKALANALKVNSSLRRLNLQE 994

Query: 453  NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            N +G +GA  ++  L  +  +  + L    IG SGA  +++ ++ N  +  +++
Sbjct: 995  NSLGMEGAICVATALSGNHGLRHINLQGNHIGESGARMISEAIKTNAPLCTVEM 1048



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 170/358 (47%), Gaps = 32/358 (8%)

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGAL 317
           RD     +  LL      R L L+ N         L   L  ++  I+ + L  N     
Sbjct: 624 RDPSPGFLQSLLPQLLYCRNLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNK 683

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA ALA+ L  N+SL  L L  NSIG +G +AL   L   +  LA L + +N I   GA 
Sbjct: 684 GAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINR-TLASLSLQSNRIRDDGAR 742

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +AE +   ++L  ++L  N IG  G +++ADALKQNR++  + L  N+I   G +A   
Sbjct: 743 SMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELILQSNSISDPGVAAPLG 802

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N  +  L L  N                   + +L L    IG  GA  +A  LR 
Sbjct: 803 ALRTNPKL--LALCTN-----------------QTLLSLNLRENSIGPEGARDLAGALRT 843

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSF 555
           N+T+  LDL AN L D+           + A+ SL H+ +     N++Q   AK L Q+ 
Sbjct: 844 NSTLKSLDLTANLLHDQGAQAVAEAVRENCALTSL-HLQW-----NFIQAGAAKALGQAL 897

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           ++ N +LTS+DL  N I D+GA A+A ALK N   A+T+L L    +   G  AL +A
Sbjct: 898 QL-NTSLTSLDLQENAIGDEGASAVASALKVN--TALTALYLQVASIGAPGAQALGEA 952



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 134/238 (56%), Gaps = 9/238 (3%)

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+C+ +  I+L  N I ++GA+ +A +L  NR++TT+DL  N+I  +GA A+A  LK N 
Sbjct: 666 KDCR-IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINR 724

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + SL L  N I  DGA++++E L  +  ++ L L    IG  G + +AD L+ N ++  
Sbjct: 725 TLASLSLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKE 784

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSL---KHMLFYSLCINYL--QGAKCLAQSFKVV 558
           L L++N + D   +   G    +  + +L   + +L  +L  N +  +GA+ LA + +  
Sbjct: 785 LILQSNSISDPGVAAPLGALRTNPKLLALCTNQTLLSLNLRENSIGPEGARDLAGALRT- 843

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           N  L S+DL  N + D GA A+A+A++  E+ A+TSL+L  NF+      AL  A  L
Sbjct: 844 NSTLKSLDLTANLLHDQGAQAVAEAVR--ENCALTSLHLQWNFIQAGAAKALGQALQL 899


>gi|441659579|ref|XP_003269125.2| PREDICTED: protein NLRC3 [Nomascus leucogenys]
          Length = 1136

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/378 (35%), Positives = 201/378 (53%), Gaps = 10/378 (2%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 767  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSL 826

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N +   G  S+AEAL    T+  LHL  N  G +GA  +A  L+ N+SL+EL L  
Sbjct: 827  SLQGNTVRDDGARSVAEALASTRTLSMLHLQKNSIGPMGAQQMADALKQNRSLKELMLSS 886

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N +
Sbjct: 887  NSIGDGGAKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLTANLL 945

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSLDL  N IG DG
Sbjct: 946  HDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDG 1005

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR N +      G 
Sbjct: 1006 ACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAI------GV 1059

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
             G     +A+     +   +L  N L   GA C+A +    N  L  I+L  N + D GA
Sbjct: 1060 AGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG-NHRLQHINLQGNHVGDSGA 1118

Query: 578  FAIAQALKANEDVAVTSL 595
              I++A+K N       +
Sbjct: 1119 RMISEAIKTNAPTCTVEM 1136



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 176/345 (51%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+   + G +G   LA++L  N+T   +S   N +   G ++    L S   L 
Sbjct: 793  RSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSVAEALASTRTLS 852

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L LSS  + D GAKA+AE LK N  L  L+L
Sbjct: 853  MLHLQKNSIGPMGAQQMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 912

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 913  QSNSISDAGVAALMGALCTNQTLLSLSLTANLLHDQGARAIAVAVRENRTLTSLHLQWNF 972

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I   GA  VA  +K   +L  + L +  IG 
Sbjct: 973  IQAGAAQALGQALQLNR-SLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGA 1031

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 1032 PGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1091

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    +G SGA  +++ ++ N     +++
Sbjct: 1092 CIATALSGNHRLQHINLQGNHVGDSGARMISEAIKTNAPTCTVEM 1136



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 24/335 (7%)

Query: 276  LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            ++ + L  N I   G  +LA +LL N ++ SL L  N  G  GA ALA  L+ N++L  L
Sbjct: 767  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSL 826

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L GN++ D+G R++   L+S +  L++L +  NSI   GA  +A+ +K  +SL  + L 
Sbjct: 827  SLQGNTVRDDGARSVAEALASTR-TLSMLHLQKNSIGPMGAQQMADALKQNRSLKELMLS 885

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IGD GA+ +A+ALK N+ + ++DL  N+I   G +A+   L  N  + SL L  N +
Sbjct: 886  SNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLTANLL 945

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE- 514
               GA+A++  ++ +  + +L L W  I A  A+ +   L+ N +++ LDL+ N + D+ 
Sbjct: 946  HDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDG 1005

Query: 515  VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ-------GAKCLAQSFKVVNEALTSIDL 567
             C+    L   ++A+ +L           YLQ       GA+ L ++   VN  L  +DL
Sbjct: 1006 ACAVARALKV-NTALTAL-----------YLQVASIGAPGAQVLGEAL-AVNRTLEILDL 1052

Query: 568  AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
              N I   GA A+A ALK N   ++  LNL  N L
Sbjct: 1053 RGNAIGVAGAKALANALKVNS--SLRRLNLQENSL 1085



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 37/310 (11%)

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            R+L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 739  RKLMLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 798

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            +L  N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L     ++ L L  
Sbjct: 799  DLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSVAEALASTRTLSMLHLQK 858

Query: 453  NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            N IG  GA+ +++ LK + ++  L L    IG  GA+ +A+ L+ N  +  LDL++N + 
Sbjct: 859  NSIGPMGAQQMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 918

Query: 513  DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK-------------- 556
            D       G++    A+ + + +L  SL  N L  QGA+ +A + +              
Sbjct: 919  DA------GVAALMGALCTNQTLLSLSLTANLLHDQGARAIAVAVRENRTLTSLHLQWNF 972

Query: 557  -------------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
                          +N +LTS+DL  N I DDGA A+A+ALK N   A+T+L L    + 
Sbjct: 973  IQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVN--TALTALYLQVASIG 1030

Query: 604  KFGQSALTDA 613
              G   L +A
Sbjct: 1031 APGAQVLGEA 1040


>gi|320166278|gb|EFW43177.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 587

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/398 (34%), Positives = 203/398 (51%), Gaps = 20/398 (5%)

Query: 154 LNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGI 207
           +NE  +EL      A   +D++     D     +AE+L  N  T  ++   A  I  A  
Sbjct: 4   MNELQRELYDKVKNATEGLDLNEERIDDVEAQAIAEALKVNTLTWLKLDLGAQAIAEA-- 61

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
                 L+ N  L  LNL GN IGD G K L + L  +  +  L L+   + + GA+AI 
Sbjct: 62  ------LKVNTTLTYLNLDGNQIGDAGAKVLAEALKGHTTLTGLGLNKSQIGEVGAQAIG 115

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E LK NS L +L+L+ N I  +G  ++AEAL  N+T+  L+L+GN  G  GA A+A+ L+
Sbjct: 116 EALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIAQALK 175

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N +L++L L  N IGD G +A+   L   K +L  L +  N I   GA    E +K   
Sbjct: 176 VNSTLKKLFLDANQIGDAGAQAIGEALKVNK-RLIDLSLDGNQIGDAGAKVFGEALKVNS 234

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  ++L  N IGD GA+ IA ALK N T+  + L  N I   GA AI   LK N  +  
Sbjct: 235 TLTMLDLDANQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLID 294

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L+ N IG  GA  ++  LK +  +  L LG  QIG  GAE +A+ L+ N T+++L L 
Sbjct: 295 LRLSENHIGDAGANTIAAALKVNTTLTWLNLGENQIGNVGAEAIAEALKVNTTLTVLGLH 354

Query: 508 ANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
            N + D+  C+  + L        ++  +L    C+ Y
Sbjct: 355 TNEIGDDGACALADALEVN----TTMTKLLLDRNCMTY 388



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 166/327 (50%), Gaps = 1/327 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +++ G   GD G   LAE+L  + T   +    + I   G +A  
Sbjct: 56  QAIAEALKVNTTLTYLNLDGNQIGDAGAKVLAEALKGHTTLTGLGLNKSQIGEVGAQAIG 115

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L+L  N IGD G + + + L  N  +  L L    + D GA+AIA+ LK
Sbjct: 116 EALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIAQALK 175

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS L+ L L+ N I  +G  ++ EAL  N  +  L L+GN  G  GA    + L+ N +
Sbjct: 176 VNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLSLDGNQIGDAGAKVFGEALKVNST 235

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N IGD G +A+   L      L  L +  N I   GA  + E +K  K L+ 
Sbjct: 236 LTMLDLDANQIGDAGAQAIAQALKVNS-TLKKLFLDANQIGDAGAQAIGEALKVNKRLID 294

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  N IGD GA  IA ALK N T+T ++LG N I + GA AIA  LK N+ +T L L 
Sbjct: 295 LRLSENHIGDAGANTIAAALKVNTTLTWLNLGENQIGNVGAEAIAEALKVNTTLTVLGLH 354

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKL 478
            N IG DGA AL++ L+ +  +  L L
Sbjct: 355 TNEIGDDGACALADALEVNTTMTKLLL 381



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 179/335 (53%), Gaps = 15/335 (4%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+LN   ID     ++AEAL  N T+  L L+      LGA A+A+ L+ N +L  L+L 
Sbjct: 22  LDLNEERIDDVEAQAIAEALKVN-TLTWLKLD------LGAQAIAEALKVNTTLTYLNLD 74

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN IGD G + L   L      L  L +  + I   GA  + E +K   +L  ++L  N 
Sbjct: 75  GNQIGDAGAKVLAEALKGHT-TLTGLGLNKSQIGEVGAQAIGEALKVNSTLTMLDLDANQ 133

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD GA+ IA+ALK N T+T ++L GN I   GA AIA+ LK NS +  L L  N IG  
Sbjct: 134 IGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDA 193

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A+ E LK +  +  L L   QIG +GA+   + L+ N+T+++LDL AN + D   +G
Sbjct: 194 GAQAIGEALKVNKRLIDLSLDGNQIGDAGAKVFGEALKVNSTLTMLDLDANQIGD---AG 250

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
              ++       +LK +   +  I    GA+ + ++ K VN+ L  + L+ N I D GA 
Sbjct: 251 AQAIAQALKVNSTLKKLFLDANQIGD-AGAQAIGEALK-VNKRLIDLRLSENHIGDAGAN 308

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            IA ALK N    +T LNL  N +   G  A+ +A
Sbjct: 309 TIAAALKVN--TTLTWLNLGENQIGNVGAEAIAEA 341



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/302 (37%), Positives = 158/302 (52%), Gaps = 1/302 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  K     + + ++    G+ G   + E+L  N T   +   AN I  AG +A  
Sbjct: 84  KVLAEALKGHTTLTGLGLNKSQIGEVGAQAIGEALKVNSTLTMLDLDANQIGDAGAQAIA 143

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL GN IGD G + +   L  N+ +++L L +  + D GA+AI E LK
Sbjct: 144 EALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALK 203

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L+ N I  +G     EAL  NST+  L L+ N  G  GA A+A+ L+ N +
Sbjct: 204 VNKRLIDLSLDGNQIGDAGAKVFGEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNST 263

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L++L L  N IGD G +A+   L   K +L  L +  N I   GA  +A  +K   +L W
Sbjct: 264 LKKLFLDANQIGDAGAQAIGEALKVNK-RLIDLRLSENHIGDAGANTIAAALKVNTTLTW 322

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL  N IG+ GAE IA+ALK N T+T + L  N I   GA A+A  L+ N+ +T L L 
Sbjct: 323 LNLGENQIGNVGAEAIAEALKVNTTLTVLGLHTNEIGDDGACALADALEVNTTMTKLLLD 382

Query: 452 YN 453
            N
Sbjct: 383 RN 384



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 157/305 (51%), Gaps = 3/305 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +D+     GD G   +AE+L  N T   ++   N I  AG +A  
Sbjct: 112 QAIGEALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIA 171

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  LK L L  N IGD G + + + L  N  +  L L    + D GAK   E LK
Sbjct: 172 QALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLSLDGNQIGDAGAKVFGEALK 231

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS L +L+L+ N I  +G  ++A+AL  NST++ L L+ N  G  GA A+ + L+ NK 
Sbjct: 232 VNSTLTMLDLDANQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKR 291

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L +L L  N IGD G   + + L      L  L++G N I   GA  +AE +K   +L  
Sbjct: 292 LIDLRLSENHIGDAGANTIAAALKVNT-TLTWLNLGENQIGNVGAEAIAEALKVNTTLTV 350

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT-SLDL 450
           + L+ N+IGD+GA  +ADAL+ N T+T + L   N  + G SA+    +DN  +  + D 
Sbjct: 351 LGLHTNEIGDDGACALADALEVNTTMTKL-LLDRNCMTYGCSALLDAREDNCRLELTFDD 409

Query: 451 AYNPI 455
             NP+
Sbjct: 410 QINPL 414


>gi|60360292|dbj|BAD90390.1| mFLJ00348 protein [Mus musculus]
          Length = 1089

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 223/439 (50%), Gaps = 7/439 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +    ++S A N I   G K
Sbjct: 649  SQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAK 708

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG  G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 709  ALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAE 768

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G  GA ALA+ L+ 
Sbjct: 769  ALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV 828

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +GA  + + +    +
Sbjct: 829  NQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEGAQALTQALCRNNT 887

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 888  LKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 947

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR 
Sbjct: 948  DLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRG 1007

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +              +S++  L ++   SL ++   GA  +A +    N  L  I+L 
Sbjct: 1008 NDVGAAGAKALANALKLNSSLRRL-NLQENSLGMD---GAIFVASALS-ENHGLHHINLQ 1062

Query: 569  FNEIRDDGAFAIAQALKAN 587
             N I +  A  I++A+K N
Sbjct: 1063 GNPIGESAARMISEAIKTN 1081



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 191/383 (49%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N IG++G K L   L+ N  +  L L S  +   GAKA+A+ LK N  L  L
Sbjct: 692  IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 751

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N+I   G   +AEAL+ N TI  L L  N  G +GA  +A  L+ N+SL+ L    
Sbjct: 752  SLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSS 811

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N+IGD G  AL   L   +  L  LD+ +NSIS  G   +   + + ++L  +NL  N I
Sbjct: 812  NTIGDRGAIALAEALKVNQ-ILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSI 870

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ +  AL +N T+  +DL  N +H +GA AIA  + +N  +T L L +N I A  
Sbjct: 871  SPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGA 930

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A+AL + L+                             N T++ LDL+ N + DE  S  
Sbjct: 931  ARALGQALQL----------------------------NRTLTTLDLQENAIGDEGASSV 962

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             G    ++ + +    L+  +     QGA+ L ++   VN  L  +DL  N++   GA A
Sbjct: 963  AGALKVNTTLIA----LYLQVASIGSQGAQALGEAL-TVNRTLEILDLRGNDVGAAGAKA 1017

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 1018 LANALKLNS--SLRRLNLQENSL 1038



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 164/324 (50%), Gaps = 11/324 (3%)

Query: 279 LELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           L L+NN         L   L  ++  IR + L  N  G  GA ALA+ L  N+SL  L L
Sbjct: 666 LRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDL 725

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             NSIG  G +AL   L   +  L  L + +N I   G   VAE + + +++  + L  N
Sbjct: 726 RSNSIGPPGAKALADALKINR-TLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKN 784

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG  GA+++ADALKQNR++  +    N I  +GA A+A  LK N ++ +LDL  N I  
Sbjct: 785 LIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISD 844

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            G   L   L  +  +++L L    I   GA+ +   L  NNT+  LDL AN L D    
Sbjct: 845 MGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDR--- 901

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIRDD 575
           G   ++      +SL H+    L  N++Q   A+ L Q+ ++ N  LT++DL  N I D+
Sbjct: 902 GAQAIAVAVGENHSLTHL---HLQWNFIQAGAARALGQALQL-NRTLTTLDLQENAIGDE 957

Query: 576 GAFAIAQALKANEDVAVTSLNLAN 599
           GA ++A ALK N  +    L +A+
Sbjct: 958 GASSVAGALKVNTTLIALYLQVAS 981



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 792  QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 851

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 852  RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 911

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 912  ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 971

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG +G +AL   L+  +  L +LD+  N + A GA  +A  +K   SL  
Sbjct: 972  LIALYLQVASIGSQGAQALGEALTVNR-TLEILDLRGNDVGAAGAKALANALKLNSSLRR 1030

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL +N  +  I+L GN I    A  I+  +K N+   ++++
Sbjct: 1031 LNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1089



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 29/345 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 746  RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 805

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQL-----------------------SSVDL 258
             L  S N IGD G   L + L  N  +E L L                       SS++L
Sbjct: 806  ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 865

Query: 259  RD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
            R+     EGA+A+ + L  N+ L+ L+L  N++   G  ++A A+ EN ++  LHL  N+
Sbjct: 866  RENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNF 925

Query: 314  GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              A  A AL + L+ N++L  L L  N+IGDEG  ++   L      L  L +   SI +
Sbjct: 926  IQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNT-TLIALYLQVASIGS 984

Query: 374  KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            +GA  + E +   ++L  ++L  ND+G  GA+ +A+ALK N ++  ++L  N++   GA 
Sbjct: 985  QGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAI 1044

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             +A  L +N  +  ++L  NPIG   A+ +SE +K +    T+++
Sbjct: 1045 FVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1089



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 96/208 (46%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 873  EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 932

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 933  ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 992

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N +  +G  +LA AL  NS++R L+L  N  G  GA  +A  L  
Sbjct: 993  ALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 1052

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSS 356
            N  L  ++L GN IG+   R +   + +
Sbjct: 1053 NHGLHHINLQGNPIGESAARMISEAIKT 1080



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           I  + L   QIG  GA+ +A  L  N ++  LDLR+N +                     
Sbjct: 692 IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPP------------------ 733

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                         GAK LA + K+ N  LTS+ L  N I+DDG   +A+AL +N+ +++
Sbjct: 734 --------------GAKALADALKI-NRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISM 778

Query: 593 TSLNLANNFLTKFGQSALTDA 613
             L L  N +   G   + DA
Sbjct: 779 --LQLQKNLIGLIGAQQMADA 797


>gi|124486873|ref|NP_001074749.1| protein NLRC3 [Mus musculus]
 gi|182887927|gb|AAI60196.1| NLR family, CARD domain containing 3 [synthetic construct]
          Length = 1102

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 223/439 (50%), Gaps = 7/439 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +    ++S A N I   G K
Sbjct: 662  SQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAK 721

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG  G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 722  ALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAE 781

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G  GA ALA+ L+ 
Sbjct: 782  ALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV 841

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +GA  + + +    +
Sbjct: 842  NQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEGAQALTQALCRNNT 900

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 901  LKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 960

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR 
Sbjct: 961  DLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRG 1020

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +              +S++  L ++   SL ++   GA  +A +    N  L  I+L 
Sbjct: 1021 NDVGAAGAKALANALKLNSSLRRL-NLQENSLGMD---GAIFVASALS-ENHGLHHINLQ 1075

Query: 569  FNEIRDDGAFAIAQALKAN 587
             N I +  A  I++A+K N
Sbjct: 1076 GNPIGESAARMISEAIKTN 1094



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 191/383 (49%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N IG++G K L   L+ N  +  L L S  +   GAKA+A+ LK N  L  L
Sbjct: 705  IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 764

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N+I   G   +AEAL+ N TI  L L  N  G +GA  +A  L+ N+SL+ L    
Sbjct: 765  SLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSS 824

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N+IGD G  AL   L   +  L  LD+ +NSIS  G   +   + + ++L  +NL  N I
Sbjct: 825  NTIGDRGAIALAEALKVNQ-ILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSI 883

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ +  AL +N T+  +DL  N +H +GA AIA  + +N  +T L L +N I A  
Sbjct: 884  SPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGA 943

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A+AL + L+                             N T++ LDL+ N + DE  S  
Sbjct: 944  ARALGQALQL----------------------------NRTLTTLDLQENAIGDEGASSV 975

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             G    ++ + +    L+  +     QGA+ L ++   VN  L  +DL  N++   GA A
Sbjct: 976  AGALKVNTTLIA----LYLQVASIGSQGAQALGEAL-TVNRTLEILDLRGNDVGAAGAKA 1030

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 1031 LANALKLNS--SLRRLNLQENSL 1051



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 164/324 (50%), Gaps = 11/324 (3%)

Query: 279 LELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           L L+NN         L   L  ++  IR + L  N  G  GA ALA+ L  N+SL  L L
Sbjct: 679 LRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDL 738

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             NSIG  G +AL   L   +  L  L + +N I   G   VAE + + +++  + L  N
Sbjct: 739 RSNSIGPPGAKALADALKINR-TLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKN 797

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG  GA+++ADALKQNR++  +    N I  +GA A+A  LK N ++ +LDL  N I  
Sbjct: 798 LIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISD 857

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            G   L   L  +  +++L L    I   GA+ +   L  NNT+  LDL AN L D    
Sbjct: 858 MGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDR--- 914

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIRDD 575
           G   ++      +SL H+    L  N++Q   A+ L Q+ ++ N  LT++DL  N I D+
Sbjct: 915 GAQAIAVAVGENHSLTHL---HLQWNFIQAGAARALGQALQL-NRTLTTLDLQENAIGDE 970

Query: 576 GAFAIAQALKANEDVAVTSLNLAN 599
           GA ++A ALK N  +    L +A+
Sbjct: 971 GASSVAGALKVNTTLIALYLQVAS 994



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 805  QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 864

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 865  RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 924

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 925  ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 984

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG +G +AL   L+  +  L +LD+  N + A GA  +A  +K   SL  
Sbjct: 985  LIALYLQVASIGSQGAQALGEALTVNR-TLEILDLRGNDVGAAGAKALANALKLNSSLRR 1043

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL +N  +  I+L GN I    A  I+  +K N+   ++++
Sbjct: 1044 LNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1102



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 174/345 (50%), Gaps = 29/345 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 759  RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 818

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQL-----------------------SSVDL 258
             L  S N IGD G   L + L  N  +E L L                       SS++L
Sbjct: 819  ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 878

Query: 259  RD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
            R+     EGA+A+ + L  N+ L+ L+L  N++   G  ++A A+ EN ++  LHL  N+
Sbjct: 879  RENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNF 938

Query: 314  GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              A  A AL + L+ N++L  L L  N+IGDEG  ++   L      +A L +   SI +
Sbjct: 939  IQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIA-LYLQVASIGS 997

Query: 374  KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            +GA  + E +   ++L  ++L  ND+G  GA+ +A+ALK N ++  ++L  N++   GA 
Sbjct: 998  QGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAI 1057

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             +A  L +N  +  ++L  NPIG   A+ +SE +K +    T+++
Sbjct: 1058 FVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1102



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 96/208 (46%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 886  EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 945

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 946  ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 1005

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N +  +G  +LA AL  NS++R L+L  N  G  GA  +A  L  
Sbjct: 1006 ALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 1065

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSS 356
            N  L  ++L GN IG+   R +   + +
Sbjct: 1066 NHGLHHINLQGNPIGESAARMISEAIKT 1093



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           I  + L   QIG  GA+ +A  L  N ++  LDLR+N +                     
Sbjct: 705 IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPP------------------ 746

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                         GAK LA + K+ N  LTS+ L  N I+DDG   +A+AL +N+ +++
Sbjct: 747 --------------GAKALADALKI-NRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISM 791

Query: 593 TSLNLANNFLTKFGQSALTDA 613
             L L  N +   G   + DA
Sbjct: 792 --LQLQKNLIGLIGAQQMADA 810


>gi|158563868|sp|Q5DU56.2|NLRC3_MOUSE RecName: Full=Protein NLRC3
          Length = 1064

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 223/439 (50%), Gaps = 7/439 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +    ++S A N I   G K
Sbjct: 624  SQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAK 683

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG  G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 684  ALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAE 743

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G  GA ALA+ L+ 
Sbjct: 744  ALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV 803

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +GA  + + +    +
Sbjct: 804  NQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEGAQALTQALCRNNT 862

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 863  LKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 922

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR 
Sbjct: 923  DLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRG 982

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +              +S++  L ++   SL ++   GA  +A +    N  L  I+L 
Sbjct: 983  NDVGAAGAKALANALKLNSSLRRL-NLQENSLGMD---GAIFVASALS-ENHGLHHINLQ 1037

Query: 569  FNEIRDDGAFAIAQALKAN 587
             N I +  A  I++A+K N
Sbjct: 1038 GNPIGESAARMISEAIKTN 1056



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 191/383 (49%), Gaps = 36/383 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N IG++G K L   L+ N  +  L L S  +   GAKA+A+ LK N  L  L
Sbjct: 667  IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 726

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N+I   G   +AEAL+ N TI  L L  N  G +GA  +A  L+ N+SL+ L    
Sbjct: 727  SLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSS 786

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N+IGD G  AL   L   +  L  LD+ +NSIS  G   +   + + ++L  +NL  N I
Sbjct: 787  NTIGDRGAIALAEALKVNQ-ILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSI 845

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              EGA+ +  AL +N T+  +DL  N +H +GA AIA  + +N  +T L L +N I A  
Sbjct: 846  SPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGA 905

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A+AL + L+                             N T++ LDL+ N + DE  S  
Sbjct: 906  ARALGQALQL----------------------------NRTLTTLDLQENAIGDEGASSV 937

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             G    ++ + +    L+  +     QGA+ L ++   VN  L  +DL  N++   GA A
Sbjct: 938  AGALKVNTTLIA----LYLQVASIGSQGAQALGEAL-TVNRTLEILDLRGNDVGAAGAKA 992

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 993  LANALKLNS--SLRRLNLQENSL 1013



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 164/324 (50%), Gaps = 11/324 (3%)

Query: 279 LELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           L L+NN         L   L  ++  IR + L  N  G  GA ALA+ L  N+SL  L L
Sbjct: 641 LRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDL 700

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             NSIG  G +AL   L   +  L  L + +N I   G   VAE + + +++  + L  N
Sbjct: 701 RSNSIGPPGAKALADALKINR-TLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKN 759

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG  GA+++ADALKQNR++  +    N I  +GA A+A  LK N ++ +LDL  N I  
Sbjct: 760 LIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISD 819

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            G   L   L  +  +++L L    I   GA+ +   L  NNT+  LDL AN L D    
Sbjct: 820 MGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDR--- 876

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFNEIRDD 575
           G   ++      +SL H+    L  N++Q   A+ L Q+ ++ N  LT++DL  N I D+
Sbjct: 877 GAQAIAVAVGENHSLTHL---HLQWNFIQAGAARALGQALQL-NRTLTTLDLQENAIGDE 932

Query: 576 GAFAIAQALKANEDVAVTSLNLAN 599
           GA ++A ALK N  +    L +A+
Sbjct: 933 GASSVAGALKVNTTLIALYLQVAS 956



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 767  QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 826

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 827  RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 886

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 887  ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 946

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG +G +AL   L+  +  L +LD+  N + A GA  +A  +K   SL  
Sbjct: 947  LIALYLQVASIGSQGAQALGEALTVNR-TLEILDLRGNDVGAAGAKALANALKLNSSLRR 1005

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL +N  +  I+L GN I    A  I+  +K N+   ++++
Sbjct: 1006 LNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1064



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 29/345 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 721  RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 780

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQL-----------------------SSVDL 258
             L  S N IGD G   L + L  N  +E L L                       SS++L
Sbjct: 781  ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 840

Query: 259  RD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
            R+     EGA+A+ + L  N+ L+ L+L  N++   G  ++A A+ EN ++  LHL  N+
Sbjct: 841  RENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNF 900

Query: 314  GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              A  A AL + L+ N++L  L L  N+IGDEG  ++   L      L  L +   SI +
Sbjct: 901  IQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNT-TLIALYLQVASIGS 959

Query: 374  KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            +GA  + E +   ++L  ++L  ND+G  GA+ +A+ALK N ++  ++L  N++   GA 
Sbjct: 960  QGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAI 1019

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             +A  L +N  +  ++L  NPIG   A+ +SE +K +    T+++
Sbjct: 1020 FVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1064



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 96/208 (46%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 848  EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 907

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 908  ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 967

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N +  +G  +LA AL  NS++R L+L  N  G  GA  +A  L  
Sbjct: 968  ALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 1027

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSS 356
            N  L  ++L GN IG+   R +   + +
Sbjct: 1028 NHGLHHINLQGNPIGESAARMISEAIKT 1055



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           I  + L   QIG  GA+ +A  L  N ++  LDLR+N +                     
Sbjct: 667 IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPP------------------ 708

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                         GAK LA + K+ N  LTS+ L  N I+DDG   +A+AL +N+ +++
Sbjct: 709 --------------GAKALADALKI-NRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISM 753

Query: 593 TSLNLANNFLTKFGQSALTDA 613
             L L  N +   G   + DA
Sbjct: 754 --LQLQKNLIGLIGAQQMADA 772


>gi|320163869|gb|EFW40768.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 538

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/374 (35%), Positives = 194/374 (51%), Gaps = 10/374 (2%)

Query: 154 LNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +NE  +EL      A   +D+S           +AE+L  N T   +    N I     +
Sbjct: 4   MNELQRELYDIVKNATEDLDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDPEAQ 63

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L  L+L  N IGD G + L + L  N  ++ L L +  + D GA++IAE
Sbjct: 64  AIAEALKVNTTLTCLDLGNNRIGDAGAQSLAEALKGNKTLDELDLGNNQIGDAGAQSIAE 123

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  L  L+L  ++I  +G  ++AEAL  N+T+  L+L+GN  G  GA  LA+ L+ 
Sbjct: 124 ALKVNKTLDELDLAGSLIGDAGVQAIAEALKVNTTLTGLNLDGNQIGDAGAKVLAEALKV 183

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L +L L  N IGD G +A+   L      +  L +  N I   GA  + E +K    
Sbjct: 184 NSTLTKLDLDANQIGDAGAQAIAEALRVNP-TVTKLRLSENQIGDAGAQAIGEALKVNTG 242

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + W+NL+ N IGD GA+ IA+ALK N T+  + L  N I + GA AIA  LK N+ +T L
Sbjct: 243 VTWLNLWENRIGDAGAQAIAEALKVNTTLNRLGLSENQIGNVGARAIAEALKVNTTLTEL 302

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L+ N IG  GA+A++E LK +  +  L L   +IG  GA  +AD L  N T++ L L  
Sbjct: 303 GLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALEVNTTMTKLHLDR 362

Query: 509 NGLRDEVCSGCNGL 522
           N +      GC+ L
Sbjct: 363 NCM----TYGCSAL 372



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 130/367 (35%), Positives = 202/367 (55%), Gaps = 10/367 (2%)

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
           +D  +E  + + +++KN +    L+L+   ID +   ++AEAL  N+T+  L L  N  G
Sbjct: 1   MDDMNELQRELYDIVKNAT--EDLDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIG 58

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
              A A+A+ L+ N +L  L L  N IGD G ++L   L   K  L  LD+GNN I   G
Sbjct: 59  DPEAQAIAEALKVNTTLTCLDLGNNRIGDAGAQSLAEALKGNK-TLDELDLGNNQIGDAG 117

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE +K  K+L  ++L  + IGD G + IA+ALK N T+T ++L GN I   GA  +
Sbjct: 118 AQSIAEALKVNKTLDELDLAGSLIGDAGVQAIAEALKVNTTLTGLNLDGNQIGDAGAKVL 177

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A  LK NS +T LDL  N IG  GA+A++E L+ +  +  L+L   QIG +GA+ + + L
Sbjct: 178 AEALKVNSTLTKLDLDANQIGDAGAQAIAEALRVNPTVTKLRLSENQIGDAGAQAIGEAL 237

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           + N  ++ L+L  N + D   +G   ++       +L  +      I  + GA+ +A++ 
Sbjct: 238 KVNTGVTWLNLWENRIGD---AGAQAIAEALKVNTTLNRLGLSENQIGNV-GARAIAEAL 293

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
           KV N  LT + L+ N+I + GA AIA+ALK N  +AV  L L  N +   G   L DA +
Sbjct: 294 KV-NTTLTELGLSENQIGNVGAEAIAEALKVNTTLAV--LGLHTNEIGDDGACELADALE 350

Query: 616 LVYEMSE 622
           +   M++
Sbjct: 351 VNTTMTK 357



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 157/291 (53%), Gaps = 2/291 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q+L E  K  +    +D+     GD G   +AE+L  N+T +E+  A + I  AG++A  
Sbjct: 91  QSLAEALKGNKTLDELDLGNNQIGDAGAQSIAEALKVNKTLDELDLAGSLIGDAGVQAIA 150

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL GN IGD G K L + L  N+ + +L L +  + D GA+AIAE L+
Sbjct: 151 EALKVNTTLTGLNLDGNQIGDAGAKVLAEALKVNSTLTKLDLDANQIGDAGAQAIAEALR 210

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  +  L L+ N I  +G  ++ EAL  N+ +  L+L  N  G  GA A+A+ L+ N +
Sbjct: 211 VNPTVTKLRLSENQIGDAGAQAIGEALKVNTGVTWLNLWENRIGDAGAQAIAEALKVNTT 270

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N IG+ G RA+   L      L  L +  N I   GA  +AE +K   +L  
Sbjct: 271 LNRLGLSENQIGNVGARAIAEALKVNT-TLTELGLSENQIGNVGAEAIAEALKVNTTLAV 329

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           + L+ N+IGD+GA ++ADAL+ N T+T + L   N  + G SA+    +DN
Sbjct: 330 LGLHTNEIGDDGACELADALEVNTTMTKLHL-DRNCMTYGCSALLDAREDN 379


>gi|326434434|gb|EGD80004.1| hypothetical protein PTSG_10280 [Salpingoeca sp. ATCC 50818]
          Length = 1272

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/328 (37%), Positives = 185/328 (56%), Gaps = 2/328 (0%)

Query: 187 GYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           G  +  EEV +  A      G+K     + +N     + L G  +GD   + + + L DN
Sbjct: 4   GEKRAREEVEALLAQTKLKDGVKEEIRAIANNTCGDNVGLVGAGLGDIEARAVAEALKDN 63

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             ++ L L    +  EGA A+AE+LK+N+ L  L+L  N I   G  +LAE L  N+T+ 
Sbjct: 64  TCLKALDLWGNSIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLE 123

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L GN  G  GA ALA+ L+ N +L++L+L GN IG EG  AL   L      + +L 
Sbjct: 124 RLDLFGNDIGPEGAAALAEMLKHNTALKQLYLGGNRIGPEGAVALAEML-KHNTTMTLLA 182

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + NN I  +GA  +AE +K+  +L  ++L+ NDIG EGA  +A+ LK N T+T + L  N
Sbjct: 183 LYNNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLGLSNN 242

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           +I  +GA A+A +LK N+ +  L L  N IG +GA AL+E+LK +  +  L LG   IG 
Sbjct: 243 SIGDEGAVALAEMLKHNTALKRLYLYNNRIGPEGAVALAEMLKHNTTLERLGLGANSIGP 302

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRD 513
            GA  +A+ML++N T++ L +  NG+ +
Sbjct: 303 RGAAALAEMLKHNTTMTSLFISHNGITE 330



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 169/307 (55%), Gaps = 7/307 (2%)

Query: 159 KELRAFSS------VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           +E+RA ++      V + G   GD     +AE+L  N   + +    N I   G  A   
Sbjct: 27  EEIRAIANNTCGDNVGLVGAGLGDIEARAVAEALKDNTCLKALDLWGNSIGPEGAVALAE 86

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L+ N  L+ L+L GN IG EG   L ++L  N  +ERL L   D+  EGA A+AE+LK+
Sbjct: 87  MLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAAALAEMLKH 146

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L+ L L  N I   G  +LAE L  N+T+  L L  N  G  GA ALA+ L+ N +L
Sbjct: 147 NTALKQLYLGGNRIGPEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAEMLKHNTTL 206

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L GN IG EG  AL   L      +  L + NNSI  +GA  +AE +K+  +L  +
Sbjct: 207 ERLDLFGNDIGPEGAVALAEML-KHNTTMTGLGLSNNSIGDEGAVALAEMLKHNTALKRL 265

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            LY N IG EGA  +A+ LK N T+  + LG N+I  +GA+A+A +LK N+ +TSL +++
Sbjct: 266 YLYNNRIGPEGAVALAEMLKHNTTLERLGLGANSIGPRGAAALAEMLKHNTTMTSLFISH 325

Query: 453 NPIGADG 459
           N I   G
Sbjct: 326 NGITERG 332



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/308 (37%), Positives = 167/308 (54%), Gaps = 13/308 (4%)

Query: 181 FLAESLGYNQTAEEVSFAAN-------GITAAGI-----KAFDGVLQSNIALKTLNLSGN 228
            LA++   +   EE+   AN       G+  AG+     +A    L+ N  LK L+L GN
Sbjct: 15  LLAQTKLKDGVKEEIRAIANNTCGDNVGLVGAGLGDIEARAVAEALKDNTCLKALDLWGN 74

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG EG   L ++L  N  +ERL L   D+  EGA A+AE+LK+N+ L  L+L  N I  
Sbjct: 75  SIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLERLDLFGNDIGP 134

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  +LAE L  N+ ++ L+L GN  G  GA ALA+ L+ N ++  L L+ N IG EG  
Sbjct: 135 EGAAALAEMLKHNTALKQLYLGGNRIGPEGAVALAEMLKHNTTMTLLALYNNRIGPEGAV 194

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L      L  LD+  N I  +GA  +AE +K+  ++  + L  N IGDEGA  +A
Sbjct: 195 ALAEMLKHNT-TLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLGLSNNSIGDEGAVALA 253

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           + LK N  +  + L  N I  +GA A+A +LK N+ +  L L  N IG  GA AL+E+LK
Sbjct: 254 EMLKHNTALKRLYLYNNRIGPEGAVALAEMLKHNTTLERLGLGANSIGPRGAAALAEMLK 313

Query: 469 FHGNINTL 476
            +  + +L
Sbjct: 314 HNTTMTSL 321



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 147/291 (50%), Gaps = 3/291 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L E  K       +D+ G + G EG   LAE L +N T E +    N I   G  
Sbjct: 79  EGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAA 138

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   +L+ N ALK L L GN IG EG   L ++L  N  +  L L +  +  EGA A+AE
Sbjct: 139 ALAEMLKHNTALKQLYLGGNRIGPEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAE 198

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +LK+N+ L  L+L  N I   G  +LAE L  N+T+  L L+ N  G  GA ALA+ L+ 
Sbjct: 199 MLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLGLSNNSIGDEGAVALAEMLKH 258

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L+ L+L+ N IG EG  AL   L      L  L +G NSI  +GA  +AE +K+  +
Sbjct: 259 NTALKRLYLYNNRIGPEGAVALAEML-KHNTTLERLGLGANSIGPRGAAALAEMLKHNTT 317

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +  + +  N I + G   +   L+       I L  + +  K ++A+AR L
Sbjct: 318 MTSLFISHNGITERGMVNVLKQLQHIDAKAKILLFEDKL--KSSTAVARAL 366



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 142/276 (51%), Gaps = 36/276 (13%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L G  +GD   RA+   L      L  LD+  NSI  +GA  +AE +K+  +L  ++L+ 
Sbjct: 43  LVGAGLGDIEARAVAEALKDNTC-LKALDLWGNSIGPEGAVALAEMLKHNTTLERLDLFG 101

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           NDIG EGA  +A+ LK N T+  +DL GN+I  +GA+A+A +LK N+ +  L L  N IG
Sbjct: 102 NDIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAAALAEMLKHNTALKQLYLGGNRIG 161

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            +GA AL+E+LK +  +  L L   +IG  GA  +A+ML++N T+  LDL  N +  E  
Sbjct: 162 PEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPE-- 219

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
                                         GA  LA+  K  N  +T + L+ N I D+G
Sbjct: 220 ------------------------------GAVALAEMLK-HNTTMTGLGLSNNSIGDEG 248

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           A A+A+ LK N   A+  L L NN +   G  AL +
Sbjct: 249 AVALAEMLKHN--TALKRLYLYNNRIGPEGAVALAE 282



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 27/235 (11%)

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G ++   A+  N     + L G  +    A A+A  LKDN+ + +LDL  N IG +GA 
Sbjct: 23  DGVKEEIRAIANNTCGDNVGLVGAGLGDIEARAVAEALKDNTCLKALDLWGNSIGPEGAV 82

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           AL+E+LK +  +  L L    IG  GA  +A+ML++N T+  LDL  N +  E  +    
Sbjct: 83  ALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAAALAE 142

Query: 522 LSFFHSAI---------------YSLKHMLFYSLCINYL---------QGAKCLAQSFKV 557
           +   ++A+                +L  ML ++  +  L         +GA  LA+  K 
Sbjct: 143 MLKHNTALKQLYLGGNRIGPEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAEMLK- 201

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            N  L  +DL  N+I  +GA A+A+ LK N    +T L L+NN +   G  AL +
Sbjct: 202 HNTTLERLDLFGNDIGPEGAVALAEMLKHN--TTMTGLGLSNNSIGDEGAVALAE 254



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 81/162 (50%)

Query: 137 NLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
            LL+ +  ++  E    L E  K       +D+ G + G EG   LAE L +N T   + 
Sbjct: 179 TLLALYNNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLG 238

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            + N I   G  A   +L+ N ALK L L  N IG EG   L ++L  N  +ERL L + 
Sbjct: 239 LSNNSIGDEGAVALAEMLKHNTALKRLYLYNNRIGPEGAVALAEMLKHNTTLERLGLGAN 298

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +   GA A+AE+LK+N+ +  L +++N I   G  ++ + L
Sbjct: 299 SIGPRGAAALAEMLKHNTTMTSLFISHNGITERGMVNVLKQL 340


>gi|320170789|gb|EFW47688.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 585

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 148/404 (36%), Positives = 225/404 (55%), Gaps = 28/404 (6%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           I D G + + + L  N  VE+L L    + D GA+AIAE LK ++ LR L+L +N I   
Sbjct: 26  IDDAGAQAIAEGLKGNPNVEKLFLWGNQIGDAGARAIAETLKLDADLRKLDLYDNQIGED 85

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++A+AL  N+T+  L+LN N  G  GA A+A+ L+ N ++  L L  N IGD G +A
Sbjct: 86  GARAIADALKLNTTLTKLNLNDNQIGDAGAQAIAETLKVNTTMERLCLSANQIGDAGAQA 145

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L + L   K  L  +++ NN I   GA  +AE +K   +L  + L  N +GD GA  IA+
Sbjct: 146 LSAALKVNK-TLIKIELWNNQIGDAGAQAIAETLKVNATLTQLTLDKNKLGDAGATTIAE 204

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+ N+ +T++ L  N I   GA+A+A  LK N+ + +L L    IG  GA+ ++EVLK 
Sbjct: 205 MLQVNKILTSLGLDYNQIGDAGANAVAEALKVNTSLRTLHLG--KIGNAGAQTMAEVLK- 261

Query: 470 HGNINTL-KLGWCQIGASGAEFVADMLRYNNTISILDLRAN-GLRDEVCSGCNGLSFFHS 527
              +NTL +L  CQIG + A+ +A+ L+ N T++  DLR + G   E  +G N ++    
Sbjct: 262 ---MNTLTRLSMCQIGDAEAQAIAEALKVNTTLT--DLRLDLGYIGE--AGANAIA---- 310

Query: 528 AIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
              SLK++ +  L  N +   GA+ +A++ KV N  L  + L  NEI D GA AIA ALK
Sbjct: 311 --KSLKNLRYLHLGKNRIGDAGAQAIAEAVKV-NNKLRFLVLDENEIGDAGAQAIAGALK 367

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
            N    ++ L L +N +   G  A+      V++M+ K V ++ 
Sbjct: 368 VNS--TMSWLYLEDNQIGDAGAQAINK----VFKMNPKLVEVYI 405



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 189/375 (50%), Gaps = 14/375 (3%)

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
           G   GD G   +AE+L  +    ++    N I   G +A    L+ N  L  LNL+ N I
Sbjct: 51  GNQIGDAGARAIAETLKLDADLRKLDLYDNQIGEDGARAIADALKLNTTLTKLNLNDNQI 110

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GD G + + + L  N  +ERL LS+  + D GA+A++  LK N  L  +EL NN I  +G
Sbjct: 111 GDAGAQAIAETLKVNTTMERLCLSANQIGDAGAQALSAALKVNKTLIKIELWNNQIGDAG 170

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             ++AE L  N+T+  L L+ N  G  GA  +A+ L+ NK L  L L  N IGD G  A+
Sbjct: 171 AQAIAETLKVNATLTQLTLDKNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAV 230

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L      L  L +G   I   GA  +AE +K   +L    L M  IGD  A+ IA+A
Sbjct: 231 AEALKVNTS-LRTLHLG--KIGNAGAQTMAEVLK-MNTL--TRLSMCQIGDAEAQAIAEA 284

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK N T+T + L    I   GA+AIA+ LK+   +  L L  N IG  GA+A++E +K +
Sbjct: 285 LKVNTTLTDLRLDLGYIGEAGANAIAKSLKN---LRYLHLGKNRIGDAGAQAIAEAVKVN 341

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL-----SFF 525
             +  L L   +IG +GA+ +A  L+ N+T+S L L  N + D      N +        
Sbjct: 342 NKLRFLVLDENEIGDAGAQAIAGALKVNSTMSWLYLEDNQIGDAGAQAINKVFKMNPKLV 401

Query: 526 HSAIYSLKHMLFYSL 540
              IY   + L +SL
Sbjct: 402 EVYIYDQINPLAFSL 416



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 139/431 (32%), Positives = 209/431 (48%), Gaps = 42/431 (9%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           + K  +A +S +    N  D G   +AE L  N   E++    N I  AG +A    L+ 
Sbjct: 9   YDKVKKASTSFEQQCENIDDAGAQAIAEGLKGNPNVEKLFLWGNQIGDAGARAIAETLKL 68

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           +  L+ L+L  N IG++G + + D L  N  + +L L+   + D GA+AIAE LK N+ +
Sbjct: 69  DADLRKLDLYDNQIGEDGARAIADALKLNTTLTKLNLNDNQIGDAGAQAIAETLKVNTTM 128

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L+ N I  +G  +L+ AL  N T+  + L  N  G  GA A+A+ L+ N +L +L 
Sbjct: 129 ERLCLSANQIGDAGAQALSAALKVNKTLIKIELWNNQIGDAGAQAIAETLKVNATLTQLT 188

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N +GD G   +   L   K  L  L +  N I   GA  VAE +K   SL    L++
Sbjct: 189 LDKNKLGDAGATTIAEMLQVNK-ILTSLGLDYNQIGDAGANAVAEALKVNTSLR--TLHL 245

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IG+ GA+ +A+ LK N T+T + +    I    A AIA  LK N+ +T L L    IG
Sbjct: 246 GKIGNAGAQTMAEVLKMN-TLTRLSMC--QIGDAEAQAIAEALKVNTTLTDLRLDLGYIG 302

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             GA A+++ LK   N+  L LG  +IG +GA+ +A+ ++ NN +  L L  N + D   
Sbjct: 303 EAGANAIAKSLK---NLRYLHLGKNRIGDAGAQAIAEAVKVNNKLRFLVLDENEIGDA-- 357

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
                                         GA+ +A + K VN  ++ + L  N+I D G
Sbjct: 358 ------------------------------GAQAIAGALK-VNSTMSWLYLEDNQIGDAG 386

Query: 577 AFAIAQALKAN 587
           A AI +  K N
Sbjct: 387 AQAINKVFKMN 397



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 98/238 (41%), Gaps = 54/238 (22%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     GD G   +AE L  N+    +    N I  AG  A  
Sbjct: 172 QAIAETLKVNATLTQLTLDKNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVA 231

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV--------------- 256
             L+ N +L+TL+L    IG+ G + + ++L  N  + RL +  +               
Sbjct: 232 EALKVNTSLRTLHLG--KIGNAGAQTMAEVLKMNT-LTRLSMCQIGDAEAQAIAEALKVN 288

Query: 257 ----DLR--------------------------------DEGAKAIAELLKNNSILRVLE 280
               DLR                                D GA+AIAE +K N+ LR L 
Sbjct: 289 TTLTDLRLDLGYIGEAGANAIAKSLKNLRYLHLGKNRIGDAGAQAIAEAVKVNNKLRFLV 348

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+ N I  +G  ++A AL  NST+  L+L  N  G  GA A+ K  + N  L E++++
Sbjct: 349 LDENEIGDAGAQAIAGALKVNSTMSWLYLEDNQIGDAGAQAINKVFKMNPKLVEVYIY 406



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 11/169 (6%)

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           TS +     I   GA+A++E LK + N+  L L   QIG +GA  +A+ L+ +  +  LD
Sbjct: 17  TSFEQQCENIDDAGAQAIAEGLKGNPNVEKLFLWGNQIGDAGARAIAETLKLDADLRKLD 76

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALT 563
           L  N +      G +G      A+     +   +L  N +   GA+ +A++ K VN  + 
Sbjct: 77  LYDNQI------GEDGARAIADALKLNTTLTKLNLNDNQIGDAGAQAIAETLK-VNTTME 129

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            + L+ N+I D GA A++ ALK N+   +  + L NN +   G  A+ +
Sbjct: 130 RLCLSANQIGDAGAQALSAALKVNK--TLIKIELWNNQIGDAGAQAIAE 176


>gi|46447089|ref|YP_008454.1| hypothetical protein pc1455 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400730|emb|CAF24179.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1866

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 156/452 (34%), Positives = 236/452 (52%), Gaps = 16/452 (3%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            S+ + G    D+G+   A++L  N T E +SF  N I+  G++AF   L SN  L++L L
Sbjct: 1402 SLYLGGNQISDKGMEAFAQALASNTTLESLSFNENQISDKGMEAFAQALASNTTLESLYL 1461

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             GN I D+G++     L  N  ++ L L    + D+G +A A+ L +N+ L+ L  N N 
Sbjct: 1462 GGNQISDKGMEAFAQALASNTTLKSLYLDDNQISDKGMEAFAQALASNTTLKSLSFNENQ 1521

Query: 286  IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            I   G  + A+AL  N+T +SL+L GN     G  A A+ L  N +L+ L+L  N I ++
Sbjct: 1522 ISDKGMEAFAQALASNTTFKSLYLGGNQISDKGMEAFAQALASNTTLKSLYLDDNQISNK 1581

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND--IGDEG 403
            G +AL   L+S    L  L    N IS KGA  +A+ + +  +L   +LY++D  I D+G
Sbjct: 1582 GAQALAQALASN-TILKSLSFNENQISDKGAQALAQALASNTTL--KSLYLDDSQISDKG 1638

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            A+ +A AL  N+ + ++ LG N I  KGA A+A+ L  N+ + SL L    I   G +A+
Sbjct: 1639 AQALAQALASNKALKSLCLGSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAI 1698

Query: 464  SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
            ++ L  +  + +L L   QI   G E  A  L  N T+  LDLR N + D+      G+ 
Sbjct: 1699 AQALASNTTLKSLSLNGKQISDKGMEAFAQTLASNTTLESLDLRNNQISDK------GMQ 1752

Query: 524  FFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
             F   + S   +    L  N +  +G + +AQ+    N AL S+ L  N+I D G  AIA
Sbjct: 1753 AFAQTLASNTTLESLDLRNNQINDKGMEAIAQAL-ASNTALKSLYLDGNQINDKGMEAIA 1811

Query: 582  QALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            QAL +N   A+ SL L  N +   G  A+T A
Sbjct: 1812 QALASN--TALKSLYLDGNQINDKGMEAITQA 1841



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 190/412 (46%), Gaps = 28/412 (6%)

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            LN  G    +  V+ + + L  N  ++   L    + D GA+A A+ L +N+ L+ L L 
Sbjct: 1347 LNRKGISDKEMEVEVIANGLACNTALKSFWLKGNQISDRGAEAFAQALASNTTLKSLYLG 1406

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N I   G  + A+AL  N+T+ SL  N N     G  A A+ L  N +L  L+L GN I
Sbjct: 1407 GNQISDKGMEAFAQALASNTTLESLSFNENQISDKGMEAFAQALASNTTLESLYLGGNQI 1466

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             D+G+ A    L+S    L  L + +N IS KG    A+ + +  +L  ++   N I D+
Sbjct: 1467 SDKGMEAFAQALASN-TTLKSLYLDDNQISDKGMEAFAQALASNTTLKSLSFNENQISDK 1525

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            G E  A AL  N T  ++ LGGN I  KG  A A+ L  N+ + SL L  N I   GA+A
Sbjct: 1526 GMEAFAQALASNTTFKSLYLGGNQISDKGMEAFAQALASNTTLKSLYLDDNQISNKGAQA 1585

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-------- 514
            L++ L  +  + +L     QI   GA+ +A  L  N T+  L L  + + D+        
Sbjct: 1586 LAQALASNTILKSLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQA 1645

Query: 515  ---------VCSGCNGLS---FFHSAIYSLKHMLFYSLCINYLQ----GAKCLAQSFKVV 558
                     +C G N +S       A     +    SL +N  Q    G + +AQ+    
Sbjct: 1646 LASNKALKSLCLGSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAIAQAL-AS 1704

Query: 559  NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            N  L S+ L   +I D G  A AQ L +N    + SL+L NN ++  G  A 
Sbjct: 1705 NTTLKSLSLNGKQISDKGMEAFAQTLASN--TTLESLDLRNNQISDKGMQAF 1754



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 1/271 (0%)

Query: 189  NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
            N   + +SF  N I+  G +A    L SN  LK+L L  + I D+G + L   L  N  +
Sbjct: 1593 NTILKSLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQALASNKAL 1652

Query: 249  ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            + L L S  + D+GA+A+A+ L +N+ L+ L LN   I   G  ++A+AL  N+T++SL 
Sbjct: 1653 KSLCLGSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAIAQALASNTTLKSLS 1712

Query: 309  LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            LNG      G  A A+ L  N +L  L L  N I D+G++A    L+S    L  LD+ N
Sbjct: 1713 LNGKQISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTLASNTT-LESLDLRN 1771

Query: 369  NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
            N I+ KG   +A+ + +  +L  + L  N I D+G E IA AL  N  + ++ L GN I+
Sbjct: 1772 NQINDKGMEAIAQALASNTALKSLYLDGNQINDKGMEAIAQALASNTALKSLYLDGNQIN 1831

Query: 429  SKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             KG  AI + +  N+ +    L  N I  +G
Sbjct: 1832 DKGMEAITQAVASNTALKKFWLNGNLIKQEG 1862



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 111/195 (56%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +A  S+ +      D+G   LA++L  N T + +S     I+  G++A    L SN  LK
Sbjct: 1650 KALKSLCLGSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAIAQALASNTTLK 1709

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +L+L+G  I D+G++     L  N  +E L L +  + D+G +A A+ L +N+ L  L+L
Sbjct: 1710 SLSLNGKQISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTLASNTTLESLDL 1769

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             NN I+  G  ++A+AL  N+ ++SL+L+GN     G  A+A+ L  N +L+ L+L GN 
Sbjct: 1770 RNNQINDKGMEAIAQALASNTALKSLYLDGNQINDKGMEAIAQALASNTALKSLYLDGNQ 1829

Query: 342  IGDEGIRALMSGLSS 356
            I D+G+ A+   ++S
Sbjct: 1830 INDKGMEAITQAVAS 1844



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 1/266 (0%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            S+  +     D+G   LA++L  N T + +    + I+  G +A    L SN ALK+L L
Sbjct: 1598 SLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQALASNKALKSLCL 1657

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
              N I D+G + L   L  N  ++ L L+   + D+G +AIA+ L +N+ L+ L LN   
Sbjct: 1658 GSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAIAQALASNTTLKSLSLNGKQ 1717

Query: 286  IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            I   G  + A+ L  N+T+ SL L  N     G  A A+ L  N +L  L L  N I D+
Sbjct: 1718 ISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTLASNTTLESLDLRNNQINDK 1777

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            G+ A+   L+S    L  L +  N I+ KG   +A+ + +  +L  + L  N I D+G E
Sbjct: 1778 GMEAIAQALASNTA-LKSLYLDGNQINDKGMEAIAQALASNTALKSLYLDGNQINDKGME 1836

Query: 406  KIADALKQNRTITTIDLGGNNIHSKG 431
             I  A+  N  +    L GN I  +G
Sbjct: 1837 AITQAVASNTALKKFWLNGNLIKQEG 1862


>gi|320170451|gb|EFW47350.1| serine/threonine-protein kinase PBS1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1403

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 180/333 (54%), Gaps = 5/333 (1%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A +L  N+ A  +  + N    AG++A    L+ N+++ TL L  NPIGD G   + + 
Sbjct: 9   IAAALKVNKVATVILLSENLFGNAGVQAVADSLKVNMSVTTLCLRSNPIGDTGALAIAET 68

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  ++L    + D GA+AIA+ L  N+ L  LEL+ N I  +G  ++A A   N
Sbjct: 69  LQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGDAGMEAIALAFNVN 128

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG---NSIGDEGIRALMSGLSSRK 358
            T+ SL L GN  G   A  +A+ L  N +L EL L G   N +GD G +A+  GL + K
Sbjct: 129 KTVTSLRLGGNPIGDAAAQTIAETLAVNTTLTELGLGGANSNHLGDAGAQAIAEGLKANK 188

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
              A LD+  N I   GA  +AE +K   +L  + L +N IGD G + IAD LK N  +T
Sbjct: 189 AVTA-LDLSMNEIGTVGAQAIAEALKVNTTLTKLELSVNGIGDSGVKAIADGLKVNPRLT 247

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            + L    I + GA AI+  LK N  +T L L YN IG DG +A+++ LK H  +  L L
Sbjct: 248 ELHLAHCQIGAAGAKAISEALKVNKTVTQLYLGYNQIGDDGVQAIADTLKEH-TMTELIL 306

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              +IG +GA+ +A+ LR N  ++ L L  N +
Sbjct: 307 SGNRIGDAGAQAIAEALRVNKRLTKLFLHENQI 339



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 194/407 (47%), Gaps = 64/407 (15%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A ++A    L+ N     + LS N  G+ GV+ + D L  N  V  L L S  + D GA 
Sbjct: 4   AEVQAIAAALKVNKVATVILLSENLFGNAGVQAVADSLKVNMSVTTLCLRSNPIGDTGAL 63

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE L+ N+ L  + L +  I  +G  ++A+ L  N+T+  L L+ N  G  G  A+A 
Sbjct: 64  AIAETLQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGDAGMEAIAL 123

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN-NSISAKGAFHVAEYI 383
               NK++  L L GN IGD   + +   L+     L  L +G  NS             
Sbjct: 124 AFNVNKTVTSLRLGGNPIGDAAAQTIAETLAVNT-TLTELGLGGANS------------- 169

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
                        N +GD GA+ IA+ LK N+ +T +DL  N I + GA AIA  LK N+
Sbjct: 170 -------------NHLGDAGAQAIAEGLKANKAVTALDLSMNEIGTVGAQAIAEALKVNT 216

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +T L+L+ N IG  G KA+++ LK +  +  L L  CQIGA+GA+ +++ L+ N T++ 
Sbjct: 217 TLTKLELSVNGIGDSGVKAIADGLKVNPRLTELHLAHCQIGAAGAKAISEALKVNKTVTQ 276

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
           L L  N + D+                                G + +A + K     +T
Sbjct: 277 LYLGYNQIGDD--------------------------------GVQAIADTLK--EHTMT 302

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            + L+ N I D GA AIA+AL+ N+   +T L L  N +  + ++AL
Sbjct: 303 ELILSGNRIGDAGAQAIAEALRVNKR--LTKLFLHENQIGYYEETAL 347



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 152/295 (51%), Gaps = 5/295 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N T   +      I  AG +A    L  N  L  L LS N IGD 
Sbjct: 57  IGDTGALAIAETLQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGDA 116

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL---NNNMIDYSG 290
           G++ +      N  V  L+L    + D  A+ IAE L  N+ L  L L   N+N +  +G
Sbjct: 117 GMEAIALAFNVNKTVTSLRLGGNPIGDAAAQTIAETLAVNTTLTELGLGGANSNHLGDAG 176

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             ++AE L  N  + +L L+ N  G +GA A+A+ L+ N +L +L L  N IGD G++A+
Sbjct: 177 AQAIAEGLKANKAVTALDLSMNEIGTVGAQAIAEALKVNTTLTKLELSVNGIGDSGVKAI 236

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
             GL     +L  L + +  I A GA  ++E +K  K++  + L  N IGD+G + IAD 
Sbjct: 237 ADGLKVNP-RLTELHLAHCQIGAAGAKAISEALKVNKTVTQLYLGYNQIGDDGVQAIADT 295

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           LK++ T+T + L GN I   GA AIA  L+ N  +T L L  N IG     AL +
Sbjct: 296 LKEH-TMTELILSGNRIGDAGAQAIAEALRVNKRLTKLFLHENQIGYYEETALRQ 349



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 122/244 (50%), Gaps = 36/244 (14%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D   + IA ALK N+  T I L  N   + G  A+A  LK N  +T+L L  NPIG  
Sbjct: 1   MNDAEVQAIAAALKVNKVATVILLSENLFGNAGVQAVADSLKVNMSVTTLCLRSNPIGDT 60

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA A++E L+ +  +  ++LG CQIG +GA+ +A  L  N T++ L+L AN + D   +G
Sbjct: 61  GALAIAETLQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGD---AG 117

Query: 519 CNGLSF---FHSAIYSLK-----------HMLFYSLCINYL----------------QGA 548
              ++     +  + SL+             +  +L +N                   GA
Sbjct: 118 MEAIALAFNVNKTVTSLRLGGNPIGDAAAQTIAETLAVNTTLTELGLGGANSNHLGDAGA 177

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
           + +A+  K  N+A+T++DL+ NEI   GA AIA+ALK N    +T L L+ N +   G  
Sbjct: 178 QAIAEGLKA-NKAVTALDLSMNEIGTVGAQAIAEALKVN--TTLTKLELSVNGIGDSGVK 234

Query: 609 ALTD 612
           A+ D
Sbjct: 235 AIAD 238



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 88/171 (51%), Gaps = 1/171 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   +AE L  N+    +  + N I   G +A    L+ N  L  L LS N IGD
Sbjct: 171 HLGDAGAQAIAEGLKANKAVTALDLSMNEIGTVGAQAIAEALKVNTTLTKLELSVNGIGD 230

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            GVK + D L  N  +  L L+   +   GAKAI+E LK N  +  L L  N I   G  
Sbjct: 231 SGVKAIADGLKVNPRLTELHLAHCQIGAAGAKAISEALKVNKTVTQLYLGYNQIGDDGVQ 290

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           ++A+ L E+ T+  L L+GN  G  GA A+A+ L  NK L +L LH N IG
Sbjct: 291 AIADTLKEH-TMTELILSGNRIGDAGAQAIAEALRVNKRLTKLFLHENQIG 340



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 1/153 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +++S    GD G+  +A+ L  N    E+  A   I AAG KA  
Sbjct: 206 QAIAEALKVNTTLTKLELSVNGIGDSGVKAIADGLKVNPRLTELHLAHCQIGAAGAKAIS 265

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  +  L L  N IGD+GV+ + D L ++   E L LS   + D GA+AIAE L+
Sbjct: 266 EALKVNKTVTQLYLGYNQIGDDGVQAIADTLKEHTMTE-LILSGNRIGDAGAQAIAEALR 324

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
            N  L  L L+ N I Y   T+L ++   + TI
Sbjct: 325 VNKRLTKLFLHENQIGYYEETALRQSAHASCTI 357


>gi|320170281|gb|EFW47180.1| hypothetical protein CAOG_05124 [Capsaspora owczarzaki ATCC 30864]
          Length = 1377

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/340 (34%), Positives = 179/340 (52%), Gaps = 1/340 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           FGD G   +A +L  N T  ++    N I   G +A    L+ N  L  L L GN +GD 
Sbjct: 55  FGDAGAQAIAVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLRGNRVGDA 114

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  + +L L    +   GA+AIA+ LK N+ L   +L +N I   G  +
Sbjct: 115 GAQAIAEALKVNTTLTKLYLQYNQIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGAQA 174

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A+AL  N+ +    L GN  G +GA A+A+ L+ N +L +++LH N  G+ G +A+   
Sbjct: 175 IADALKVNTKLTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEA 234

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L  L    NSI   G   +AE +    +L+ ++L  N +GD GA  IA+ALK 
Sbjct: 235 LKV-NTVLTQLIFSTNSIGVAGTHAIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKV 293

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N T+T +DL  N I   GA AIA  LK N+ +T L  + N IG  G +A++E L  +  +
Sbjct: 294 NTTLTQLDLRYNQIGDVGAQAIAEALKVNTALTQLIFSTNSIGVAGTQAIAEALMVNTTL 353

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             L L   ++G +GA  V++ L  N T+  L+L  N ++D
Sbjct: 354 IQLDLDSNRVGDAGARSVSEALLKNTTLQNLNLWLNQIKD 393



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 192/354 (54%), Gaps = 8/354 (2%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+AIA  LK N+ L  ++L+ N I   G  ++AEAL  N+T+  L+L GN  G  GA
Sbjct: 57  DAGAQAIAVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLRGNRVGDAGA 116

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ N +L +L+L  N IG  G +A+   L      L   D+ +N I   GA  +
Sbjct: 117 QAIAEALKVNTTLTKLYLQYNQIGHVGAQAIADALKV-NTTLTQFDLQDNQIGRVGAQAI 175

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+ +K    L   +L  N +GD GA+ IA+ALK N T+T ++L  N     GA AIA  L
Sbjct: 176 ADALKVNTKLTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEAL 235

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K N+V+T L  + N IG  G  A++E L  +  +  L L   Q+G  GA  +A+ L+ N 
Sbjct: 236 KVNTVLTQLIFSTNSIGVAGTHAIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNT 295

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVN 559
           T++ LDLR N + D    G   ++       +L  ++F +  I  + G + +A++  +VN
Sbjct: 296 TLTQLDLRYNQIGD---VGAQAIAEALKVNTALTQLIFSTNSIG-VAGTQAIAEAL-MVN 350

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             L  +DL  N + D GA ++++AL  N    + +LNL  N +   G  ++++A
Sbjct: 351 TTLIQLDLDSNRVGDAGARSVSEALLKN--TTLQNLNLWLNQIKDAGARSISEA 402



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 167/329 (50%), Gaps = 36/329 (10%)

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           M   +G  ++A AL  N+T+  + L+GN  G +GA A+A+ L+ N +L +L+L GN +GD
Sbjct: 54  MFGDAGAQAIAVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLRGNRVGD 113

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G +A+   L      L  L +  N I   GA  +A+ +K   +L   +L  N IG  GA
Sbjct: 114 AGAQAIAEALKV-NTTLTKLYLQYNQIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGA 172

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IADALK N  +T  DL GN +   GA AIA  LK N+ +T ++L  N  G  GA+A++
Sbjct: 173 QAIADALKVNTKLTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIA 232

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           E LK +  +  L      IG +G   +A+ L  N T+  LDL  N + D           
Sbjct: 233 EALKVNTVLTQLIFSTNSIGVAGTHAIAEALMVNTTLIQLDLPGNQVGDV---------- 282

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                 GA+ +A++ KV N  LT +DL +N+I D GA AIA+AL
Sbjct: 283 ----------------------GARAIAEALKV-NTTLTQLDLRYNQIGDVGAQAIAEAL 319

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDA 613
           K N   A+T L  + N +   G  A+ +A
Sbjct: 320 KVN--TALTQLIFSTNSIGVAGTQAIAEA 346



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 170/358 (47%), Gaps = 29/358 (8%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + + G   GD G   +AE+L  N T  ++    N I   G +A  
Sbjct: 89  QAIAEALKVNTTLTKLYLRGNRVGDAGAQAIAEALKVNTTLTKLYLQYNQIGHVGAQAIA 148

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L   +L  N IG  G + + D L  N  + +  L    + D GA+AIAE LK
Sbjct: 149 DALKVNTTLTQFDLQDNQIGRVGAQAIADALKVNTKLTQFDLRGNQVGDVGAQAIAEALK 208

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  + L+NN     G  ++AEAL  N+ +  L  + N  G  G +A+A+ L  N +
Sbjct: 209 VNTTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQLIFSTNSIGVAGTHAIAEALMVNTT 268

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L +L L GN +GD G RA                             +AE +K   +L  
Sbjct: 269 LIQLDLPGNQVGDVGARA-----------------------------IAEALKVNTTLTQ 299

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N IGD GA+ IA+ALK N  +T +    N+I   G  AIA  L  N+ +  LDL 
Sbjct: 300 LDLRYNQIGDVGAQAIAEALKVNTALTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLD 359

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            N +G  GA+++SE L  +  +  L L   QI  +GA  +++ L+ N T+  L+L  N
Sbjct: 360 SNRVGDAGARSVSEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAEN 417



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 151/284 (53%), Gaps = 1/284 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G   +A++L  N T  +     N I   G +A    L+ N  L   +L GN +GD
Sbjct: 138 QIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGAQAIADALKVNTKLTQFDLRGNQVGD 197

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  + ++ L +    + GA+AIAE LK N++L  L  + N I  +G  
Sbjct: 198 VGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQLIFSTNSIGVAGTH 257

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL+ N+T+  L L GN  G +GA A+A+ L+ N +L +L L  N IGD G +A+  
Sbjct: 258 AIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNTTLTQLDLRYNQIGDVGAQAIAE 317

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  L    NSI   G   +AE +    +L+ ++L  N +GD GA  +++AL 
Sbjct: 318 ALKVNTA-LTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLDSNRVGDAGARSVSEALL 376

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           +N T+  ++L  N I   GA +I+  L+ N+ + +L+LA N IG
Sbjct: 377 KNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRIG 420



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 124/264 (46%), Gaps = 29/264 (10%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +  D+ G   GD G   +AE+L  N T  +V+   N     G +A    L+ N  L  L
Sbjct: 185 LTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQL 244

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             S N IG  G   + + L+ N  + +L L    + D GA+AIAE LK N+ L  L+L  
Sbjct: 245 IFSTNSIGVAGTHAIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNTTLTQLDLRY 304

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++AEAL  N+ +  L  + N  G  G  A+A+ L  N +L +L L  N +G
Sbjct: 305 NQIGDVGAQAIAEALKVNTALTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLDSNRVG 364

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G R++   L                            +KN  +L  +NL++N I D G
Sbjct: 365 DAGARSVSEAL----------------------------LKNT-TLQNLNLWLNQIKDAG 395

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  I++AL++N T+  ++L  N I
Sbjct: 396 ARSISEALQKNTTLQNLNLAENRI 419



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 1/220 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + V++    FG+ G   +AE+L  N    ++ F+ N I  AG  A  
Sbjct: 201 QAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQLIFSTNSIGVAGTHAIA 260

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N  L  L+L GN +GD G + + + L  N  + +L L    + D GA+AIAE LK
Sbjct: 261 EALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNTTLTQLDLRYNQIGDVGAQAIAEALK 320

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L  + N I  +G  ++AEAL+ N+T+  L L+ N  G  GA ++++ L  N +
Sbjct: 321 VNTALTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLDSNRVGDAGARSVSEALLKNTT 380

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           L+ L+L  N I D G R++   L  +   L  L++  N I
Sbjct: 381 LQNLNLWLNQIKDAGARSISEAL-QKNTTLQNLNLAENRI 419


>gi|344291959|ref|XP_003417696.1| PREDICTED: protein NLRC3 [Loxodonta africana]
          Length = 1067

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 222/463 (47%), Gaps = 37/463 (7%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
             L     +L    S+ +    F D  +  L   L G +   +++S A N I+  G KA  
Sbjct: 628  VLQSLLPQLLYCQSLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALA 687

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N +L  L+L GN IG +G K L D L  N  +  L L S  ++D+GA +IAE L 
Sbjct: 688  RSLLVNRSLTALDLRGNSIGPQGAKALADALKINRTLASLSLQSNAIKDDGAGSIAEALA 747

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +N  L +L L  N I   G   +A+AL +N +++ L  + N     GA ALA+ L+ N+ 
Sbjct: 748  SNRTLCMLCLQKNTIGPVGAQRMADALKQNRSLKELIFSSNSISDRGAKALAEALKVNQG 807

Query: 332  LRELH-LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L  +      D   R   S  S  +G L+   +  NSIS +GA  +A  +    +L 
Sbjct: 808  LESLEGVCLTPSRDPVDRGPPSARSEAQGLLSFFSLRENSISPEGAQALARALCTNSTLK 867

Query: 391  WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             ++L  N + D GA+ IA A+++NR +T++ L  N + +  A A+   L+ N  + SLDL
Sbjct: 868  NLDLTANLLHDRGAQAIAGAVRENRALTSLHLQWNFLQASAAEALGHALQLNRSLVSLDL 927

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
              N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ +LDLR N 
Sbjct: 928  QENAIGDEGASAVARALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEVLDLRGNA 987

Query: 511  LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFN 570
            +         G++                       GAK LA + K VN +L  ++L  N
Sbjct: 988  I---------GVA-----------------------GAKALANALK-VNSSLRRLNLQEN 1014

Query: 571  EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             +  DGA  IA AL  N    +  +NL  N + + G   +++A
Sbjct: 1015 SLGMDGAVCIATALSGNH--GLQHINLQGNHIGESGTRMISEA 1055



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 167/347 (48%), Gaps = 31/347 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 722  RTLASLSLQSNAIKDDGAGSIAEALASNRTLCMLCLQKNTIGPVGAQRMADALKQNRSLK 781

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQ-------------------------LSSV 256
             L  S N I D G K L + L  N G+E L+                         LS  
Sbjct: 782  ELIFSSNSISDRGAKALAEALKVNQGLESLEGVCLTPSRDPVDRGPPSARSEAQGLLSFF 841

Query: 257  DLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
             LR+     EGA+A+A  L  NS L+ L+L  N++   G  ++A A+ EN  + SLHL  
Sbjct: 842  SLRENSISPEGAQALARALCTNSTLKNLDLTANLLHDRGAQAIAGAVRENRALTSLHLQW 901

Query: 312  NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
            N+  A  A AL   L+ N+SL  L L  N+IGDEG  A+   L +    L  L +   SI
Sbjct: 902  NFLQASAAEALGHALQLNRSLVSLDLQENAIGDEGASAVARALKANTA-LTALYLQVASI 960

Query: 372  SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
             A GA  + E +   ++L  ++L  N IG  GA+ +A+ALK N ++  ++L  N++   G
Sbjct: 961  GAPGAQALGEALAVNRTLEVLDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDG 1020

Query: 432  ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            A  IA  L  N  +  ++L  N IG  G + +SE ++ +    T+++
Sbjct: 1021 AVCIATALSGNHGLQHINLQGNHIGESGTRMISEAVRTNAPTCTVEM 1067



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 143/287 (49%), Gaps = 11/287 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 640 QSLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTAL 699

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+ ++ L  N I   GA +IA  L  N  +  L L  
Sbjct: 700 DLRGNSIGPQGAKALADALKINRTLASLSLQSNAIKDDGAGSIAEALASNRTLCMLCLQK 759

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD-LRANGL 511
           N IG  GA+ +++ LK + ++  L      I   GA+ +A+ L+ N  +  L+ +     
Sbjct: 760 NTIGPVGAQRMADALKQNRSLKELIFSSNSISDRGAKALAEALKVNQGLESLEGVCLTPS 819

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAF 569
           RD V  G          + S     F+SL  N +  +GA+ LA++    N  L ++DL  
Sbjct: 820 RDPVDRGPPSARSEAQGLLS-----FFSLRENSISPEGAQALARAL-CTNSTLKNLDLTA 873

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           N + D GA AIA A++ N   A+TSL+L  NFL      AL  A  L
Sbjct: 874 NLLHDRGAQAIAGAVRENR--ALTSLHLQWNFLQASAAEALGHALQL 918



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 117  PSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKEL---RAFSSVDMSGRN 173
            PSR   P   G   +      LLS F+ +    S +     A+ L       ++D++   
Sbjct: 818  PSR--DPVDRGPPSARSEAQGLLSFFSLRENSISPEGAQALARALCTNSTLKNLDLTANL 875

Query: 174  FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
              D G   +A ++  N+    +    N + A+  +A    LQ N +L +L+L  N IGDE
Sbjct: 876  LHDRGAQAIAGAVRENRALTSLHLQWNFLQASAAEALGHALQLNRSLVSLDLQENAIGDE 935

Query: 234  GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            G   +   L  N  +  L L    +   GA+A+ E L  N  L VL+L  N I  +G  +
Sbjct: 936  GASAVARALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEVLDLRGNAIGVAGAKA 995

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            LA AL  NS++R L+L  N  G  GA  +A  L GN  L+ ++L GN IG+ G R +
Sbjct: 996  LANALKVNSSLRRLNLQENSLGMDGAVCIATALSGNHGLQHINLQGNHIGESGTRMI 1052


>gi|320165782|gb|EFW42681.1| hypothetical protein CAOG_07813 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 176/331 (53%), Gaps = 2/331 (0%)

Query: 147 FRESKQTLNEFAKELR-AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           ++   Q   +F  +++ A   +++  R  GDE    +AE+L  N+T   +    N I   
Sbjct: 4   YQNMNQRQRQFYDQVKNASGQLNLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDV 63

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G  AF   L+ N AL  + L  N IG+ G + +   L  N  +  L L    L D GA+A
Sbjct: 64  GALAFAEALKVNKALAEIRLWANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQA 123

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IAE L+ N+ L  L L  N I   G  ++AEAL  N T+ +L L  N  G +GA A+A+ 
Sbjct: 124 IAEALQVNTTLPKLYLRENQIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEA 183

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ NK+L EL L  N IGD G +A+   L      L  L +  N I   GA  +AE +K 
Sbjct: 184 LKVNKTLTELSLWQNQIGDVGAQAIAEALKVNT-TLKQLYLWQNQIGDVGANAIAEALKV 242

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            K+L  ++LY N IGD GA+ IA++LK N T+ T+ LG N I   GA AIA  L  N+ +
Sbjct: 243 NKTLTRLDLYKNQIGDVGAQAIAESLKANTTLGTLSLGDNQIGDAGAQAIAEALNVNTTL 302

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           T L L  N IG  GA+A++E LK +  + TL
Sbjct: 303 TELYLGENQIGDVGAQAIAEALKVNKTLTTL 333



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 167/297 (56%), Gaps = 1/297 (0%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  L  L+L  N IGD G     + L  N  +  ++L +  + + GA+AIA
Sbjct: 38  KAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLWANQIGEVGAQAIA 97

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           + LK N+ L  L L  N +  +G  ++AEAL  N+T+  L+L  N  G +GA A+A+ L+
Sbjct: 98  KALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVGAQAIAEALK 157

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            NK+L  L L+ N IGD G +A+   L   K  L  L +  N I   GA  +AE +K   
Sbjct: 158 VNKTLTTLSLYQNQIGDVGAQAIAEALKVNK-TLTELSLWQNQIGDVGAQAIAEALKVNT 216

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  + L+ N IGD GA  IA+ALK N+T+T +DL  N I   GA AIA  LK N+ + +
Sbjct: 217 TLKQLYLWQNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQAIAESLKANTTLGT 276

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           L L  N IG  GA+A++E L  +  +  L LG  QIG  GA+ +A+ L+ N T++ L
Sbjct: 277 LSLGDNQIGDAGAQAIAEALNVNTTLTELYLGENQIGDVGAQAIAEALKVNKTLTTL 333



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 174/339 (51%), Gaps = 34/339 (10%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L L    + DE AKAIAE LK N  L  L+L+NN I   G  + AEAL  N  +  + L
Sbjct: 24  QLNLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRL 83

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N  G +GA A+AK L+ N +L  L+L  N +GD G +A+   L      L  L +  N
Sbjct: 84  WANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNT-TLPKLYLREN 142

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            I   GA  +AE +K  K+L  ++LY N IGD GA+ IA+ALK N+T+T + L  N I  
Sbjct: 143 QIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGD 202

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA AIA  LK N+ +  L L  N IG  GA A++E LK +  +  L L   QIG  GA+
Sbjct: 203 VGAQAIAEALKVNTTLKQLYLWQNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQ 262

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK 549
            +A+ L+ N T+  L L  N + D                                 GA+
Sbjct: 263 AIAESLKANTTLGTLSLGDNQIGDA--------------------------------GAQ 290

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
            +A++  V N  LT + L  N+I D GA AIA+ALK N+
Sbjct: 291 AIAEALNV-NTTLTELYLGENQIGDVGAQAIAEALKVNK 328



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/291 (40%), Positives = 164/291 (56%), Gaps = 1/291 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL    IGDE  K + + L  N  +  L L +  + D GA A AE LK N  L  + L 
Sbjct: 25  LNLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLW 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G  ++A+AL  N+T+ +L+L  N  G  GA A+A+ L+ N +L +L+L  N I
Sbjct: 85  ANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQI 144

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A+   L   K  L  L +  N I   GA  +AE +K  K+L  ++L+ N IGD 
Sbjct: 145 GDVGAQAIAEALKVNK-TLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDV 203

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N T+  + L  N I   GA+AIA  LK N  +T LDL  N IG  GA+A
Sbjct: 204 GAQAIAEALKVNTTLKQLYLWQNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQA 263

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           ++E LK +  + TL LG  QIG +GA+ +A+ L  N T++ L L  N + D
Sbjct: 264 IAESLKANTTLGTLSLGDNQIGDAGAQAIAEALNVNTTLTELYLGENQIGD 314



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/289 (37%), Positives = 160/289 (55%), Gaps = 8/289 (2%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           +L+L    IGDE  +A+   L   K  L  LD+ NN I   GA   AE +K  K+L  I 
Sbjct: 24  QLNLERRQIGDEEAKAIAEALKVNK-TLTYLDLHNNQIGDVGALAFAEALKVNKALAEIR 82

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L+ N IG+ GA+ IA ALK N T+ T+ LG N +   GA AIA  L+ N+ +  L L  N
Sbjct: 83  LWANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLREN 142

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A++E LK +  + TL L   QIG  GA+ +A+ L+ N T++ L L  N + D
Sbjct: 143 QIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGD 202

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
               G   ++       +LK +  +   I  + GA  +A++ KV N+ LT +DL  N+I 
Sbjct: 203 ---VGAQAIAEALKVNTTLKQLYLWQNQIGDV-GANAIAEALKV-NKTLTRLDLYKNQIG 257

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 622
           D GA AIA++LKAN    + +L+L +N +   G  A+ +A ++   ++E
Sbjct: 258 DVGAQAIAESLKAN--TTLGTLSLGDNQIGDAGAQAIAEALNVNTTLTE 304



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 79/169 (46%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS +  ++     Q + E  K  +  + + +     GD G   +AE+L  N T +++   
Sbjct: 165 LSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDVGAQAIAEALKVNTTLKQLYLW 224

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G  A    L+ N  L  L+L  N IGD G + + + L  N  +  L L    +
Sbjct: 225 QNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQAIAESLKANTTLGTLSLGDNQI 284

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            D GA+AIAE L  N+ L  L L  N I   G  ++AEAL  N T+ +L
Sbjct: 285 GDAGAQAIAEALNVNTTLTELYLGENQIGDVGAQAIAEALKVNKTLTTL 333


>gi|332845208|ref|XP_001167492.2| PREDICTED: protein NLRC3 [Pan troglodytes]
          Length = 1057

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 203/396 (51%), Gaps = 26/396 (6%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L    +  +G+KA+A+ LK N  L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSL 727

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL---- 335
             L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL    
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMAAP 787

Query: 336  ----------------HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
                             L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +
Sbjct: 788  SGSWDSHTQGASSSFRSLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAI 846

Query: 380  AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            A  ++   +L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L
Sbjct: 847  AHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQAL 906

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            + N  +TSLDL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N 
Sbjct: 907  QLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNR 966

Query: 500  TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVN 559
            T+ ILDLR N +     +G   L+       SL+ +      +  + GA C+A +    N
Sbjct: 967  TLEILDLRGNAIG---VAGAKALAHALKVNSSLRRLNLQENSLG-MDGAICIATALS-GN 1021

Query: 560  EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
              L  I+L  N I D GA  I++A+K N       +
Sbjct: 1022 HRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1057



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 164/337 (48%), Gaps = 21/337 (6%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 722  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLK 781

Query: 222  TL--------------------NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             L                    +L  N I D GV  L   L  N  +  L L    +  E
Sbjct: 782  ELMAAPSGSWDSHTQGASSSFRSLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPE 841

Query: 262  GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            GA+AIA  L+ NS L+ L+L  N++   G  ++A A+ EN T+ SLHL  N+  A  A A
Sbjct: 842  GAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQA 901

Query: 322  LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            L + L+ N+SL  L L  N+IGD+G  A+   L      L  L +   SI A GA  + E
Sbjct: 902  LGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTA-LTALYLQVASIGASGAQVLGE 960

Query: 382  YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
             +   ++L  ++L  N IG  GA+ +A ALK N ++  ++L  N++   GA  IA  L  
Sbjct: 961  ALAVNRTLEILDLRGNAIGVAGAKALAHALKVNSSLRRLNLQENSLGMDGAICIATALSG 1020

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            N  +  ++L  N IG  GA+ +SE +K +    T+++
Sbjct: 1021 NHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1057



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 190/383 (49%), Gaps = 45/383 (11%)

Query: 249  ERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
             +L+L +   +D   + +  +L      ++ + L  N I   G  +LA +LL N ++ SL
Sbjct: 640  RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
             L GN  G  G+ ALA  L+ N++L  L L GN++ D+G R++   L+S +  L++L + 
Sbjct: 700  DLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNR-TLSMLHLQ 758

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWI--------------------NLYMNDIGDEGAEKI 407
             NSI   GA  +A+ +K  +SL  +                    +L  N I D G   +
Sbjct: 759  KNSIGPMGAQRMADALKQNRSLKELMAAPSGSWDSHTQGASSSFRSLQSNSISDAGVAAL 818

Query: 408  ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
              AL  N+T+ ++ L  N+I  +GA AIA  L+ NS + +LDL  N +   GA+A++  +
Sbjct: 819  MGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAV 878

Query: 468  KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFH 526
            + +  + +L L W  I A  A+ +   L+ N +++ LDL+ N + D+  C+    L   +
Sbjct: 879  RENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKV-N 937

Query: 527  SAIYSLKHMLFYSLCINYLQ-------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
            +A+ +L           YLQ       GA+ L ++   VN  L  +DL  N I   GA A
Sbjct: 938  TALTAL-----------YLQVASIGASGAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKA 985

Query: 580  IAQALKANEDVAVTSLNLANNFL 602
            +A ALK N   ++  LNL  N L
Sbjct: 986  LAHALKVNS--SLRRLNLQENSL 1006



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 3/204 (1%)

Query: 150  SKQTLNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            S +     A  LRA S++   D++     D+G   +A ++  N+T   +    N I A  
Sbjct: 839  SPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGA 898

Query: 207  IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
             +A    LQ N +L +L+L  N IGD+G   +   L  N  +  L L    +   GA+ +
Sbjct: 899  AQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVL 958

Query: 267  AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             E L  N  L +L+L  N I  +G  +LA AL  NS++R L+L  N  G  GA  +A  L
Sbjct: 959  GEALAVNRTLEILDLRGNAIGVAGAKALAHALKVNSSLRRLNLQENSLGMDGAICIATAL 1018

Query: 327  EGNKSLRELHLHGNSIGDEGIRAL 350
             GN  L+ ++L GN IGD G R +
Sbjct: 1019 SGNHRLQHINLQGNHIGDSGARMI 1042


>gi|164562267|gb|ABY61045.1| nucleotide-binding oligomerization domain containing 3 [Sus scrofa]
          Length = 377

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 204/373 (54%), Gaps = 10/373 (2%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N +L TL+L  N IG +G K L D L  N  +    L S  +RD+GA+A+AE L  N  L
Sbjct: 5   NRSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAANRTL 64

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
            VL L +N +   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ N+ L+ L 
Sbjct: 65  SVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGLKSLD 124

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  NSI D G+ ALM+ L + +  L+ L++  NSIS  GA  +A  +    +L  ++L  
Sbjct: 125 LQSNSISDTGVAALMAALCTNQTLLS-LNLRENSISPDGAQDLARALCTNSTLKSLDLTA 183

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N + D+GA+ IA A+++NR +T++ L  N I +  A A+ + L+ N+ +TSLDL  N IG
Sbjct: 184 NLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIG 243

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            +GA A++  LK +  +  L L    +GA GA+ + + L  N T+ ILDLR N +     
Sbjct: 244 DEGASAVAIALKANTTLTALYLQVASVGALGAQALGEALAVNRTLEILDLRGNAI----- 298

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
            G  G     +A+     +   +L  N L   GA C+A +    N  L  I L  N I +
Sbjct: 299 -GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALS-GNHGLQHISLQGNHIGE 356

Query: 575 DGAFAIAQALKAN 587
            GA  I++A+K N
Sbjct: 357 SGARMISEAIKTN 369



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 181/348 (52%), Gaps = 1/348 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +++D+   + G +G   LA++L  N+T    S  +N I   G +A    L +N  L 
Sbjct: 6   RSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAANRTLS 65

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  N +G  G + + D L  N  +++L  SS  + D GAKA+AE LK N  L+ L+L
Sbjct: 66  VLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGLKSLDL 125

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G  +L  AL  N T+ SL+L  N     GA  LA+ L  N +L+ L L  N 
Sbjct: 126 QSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARALCTNSTLKSLDLTANL 185

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D+G +A+   +   +  L  L +  N I A  A  + + ++   SL  ++L  N IGD
Sbjct: 186 LHDQGAQAIAVAVRENRA-LTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGD 244

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA  +A ALK N T+T + L   ++ + GA A+   L  N  +  LDL  N IG  GAK
Sbjct: 245 EGASAVAIALKANTTLTALYLQVASVGALGAQALGEALAVNRTLEILDLRGNAIGVAGAK 304

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           AL+  LK + ++  L L    +G  GA  VA  L  N+ +  + L+ N
Sbjct: 305 ALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHISLQGN 352



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/361 (35%), Positives = 185/361 (51%), Gaps = 36/361 (9%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+ N  +  L L S  +  +GAKA+A+ LK N  L    L +N I   G  +LAEAL  N
Sbjct: 2   LLVNRSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAAN 61

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            T+  LHL  N  G +G   +A  L+ N+SL++L    NSIGD G +AL   L   +G L
Sbjct: 62  RTLSVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQG-L 120

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             LD+ +NSIS  G   +   +   ++LL +NL  N I  +GA+ +A AL  N T+ ++D
Sbjct: 121 KSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARALCTNSTLKSLD 180

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N +H +GA AIA  +++N  +TSL L +N I A  AKAL + L+ + ++ +L L   
Sbjct: 181 LTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQEN 240

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
            IG  GA  VA  L+ N T++ L L+                   +++ +L         
Sbjct: 241 AIGDEGASAVAIALKANTTLTALYLQV------------------ASVGAL--------- 273

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                GA+ L ++   VN  L  +DL  N I   GA A+A ALK N   ++  LNL  N 
Sbjct: 274 -----GAQALGEAL-AVNRTLEILDLRGNAIGVAGAKALANALKVNS--SLRRLNLQENS 325

Query: 602 L 602
           L
Sbjct: 326 L 326



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 161/323 (49%), Gaps = 1/323 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+G   LAE+L  N+T   +   +N +   G +     L+ N +LK L  S N IGD G 
Sbjct: 48  DDGARALAEALAANRTLSVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGA 107

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K L + L  N G++ L L S  + D G  A+   L  N  L  L L  N I   G   LA
Sbjct: 108 KALAEALKVNQGLKSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLA 167

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL  NST++SL L  N     GA A+A  +  N++L  LHL  N I     +AL   L 
Sbjct: 168 RALCTNSTLKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQ 227

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                L  LD+  N+I  +GA  VA  +K   +L  + L +  +G  GA+ + +AL  NR
Sbjct: 228 LNT-SLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQVASVGALGAQALGEALAVNR 286

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
           T+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA  ++  L  +  +  
Sbjct: 287 TLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQH 346

Query: 476 LKLGWCQIGASGAEFVADMLRYN 498
           + L    IG SGA  +++ ++ N
Sbjct: 347 ISLQGNHIGESGARMISEAIKTN 369



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 150/287 (52%), Gaps = 12/287 (4%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N+SL  L LH NSIG +G +AL   L   +  LA   + +N+I   GA  +AE +   ++
Sbjct: 5   NRSLTTLDLHSNSIGPQGAKALADALKINR-TLAFRSLQSNAIRDDGARALAEALAANRT 63

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  ++L  N +G  G + IADALKQNR++  +    N+I   GA A+A  LK N  + SL
Sbjct: 64  LSVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGLKSL 123

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL  N I   G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL A
Sbjct: 124 DLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARALCTNSTLKSLDLTA 183

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSID 566
           N L D+      G      A+   + +    L  N++Q   AK L Q+ ++ N +LTS+D
Sbjct: 184 NLLHDQ------GAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQL-NTSLTSLD 236

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           L  N I D+GA A+A ALKAN  +    L +A+  +   G  AL +A
Sbjct: 237 LQENAIGDEGASAVAIALKANTTLTALYLQVAS--VGALGAQALGEA 281



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 11/232 (4%)

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           +SL  ++L+ N IG +GA+ +ADALK NRT+    L  N I   GA A+A  L  N  ++
Sbjct: 6   RSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAANRTLS 65

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            L L  N +G  G + +++ LK + ++  L      IG  GA+ +A+ L+ N  +  LDL
Sbjct: 66  VLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGLKSLDL 125

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTS 564
           ++N + D       G++   +A+ + + +L  +L  N +   GA+ LA++    N  L S
Sbjct: 126 QSNSISD------TGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARAL-CTNSTLKS 178

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           +DL  N + D GA AIA A++  E+ A+TSL+L  NF+      AL  A  L
Sbjct: 179 LDLTANLLHDQGAQAIAVAVR--ENRALTSLHLQWNFIQAGAAKALGQALQL 228


>gi|320166084|gb|EFW42983.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 543

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/341 (39%), Positives = 187/341 (54%), Gaps = 1/341 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS     D     +AE+L  N T   +S  +N + AAG +A    L+ N  +  L L  N
Sbjct: 1   MSDIQADDADAQTIAEALKVNTTVTWLSLRSNRVGAAGAQALAEALKVNTTVTQLYLGDN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD+G   +   L  N  V RL +S  ++ D G +AIAE L+ N+ + VL L  N I  
Sbjct: 61  RIGDDGAGAIAAALTVNMTVTRLDMSINEIGDAGVQAIAEALRVNTTVIVLRLYANQIHD 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  +LAEAL  N T+  L+L  N  G +GA A+A+ L+ N +L   +L GN IGD G +
Sbjct: 121 VGAQALAEALSVNKTVTQLYLQLNQIGDVGAQAIAEALKVNTALTVPNLGGNRIGDAGAQ 180

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L      +  L +  N I   GA  +AE +K   +L  +NL  N IGD GA+ IA
Sbjct: 181 AIAEALKVNV-TVTELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIA 239

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            ALK N+T+TT+ L  N I + G   IA  L+ N+V+T LDL  N     GA+A++EVLK
Sbjct: 240 QALKLNQTLTTLYLVRNRIGNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQAIAEVLK 299

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            +  +  L L   QIG  GAE +A+ L+ N T++ L+LR+N
Sbjct: 300 VNKRLAWLNLPDNQIGDVGAEAIAEALKVNTTLTYLNLRSN 340



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/350 (37%), Positives = 187/350 (53%), Gaps = 12/350 (3%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +S +   D  A+ IAE LK N+ +  L L +N +  +G  +LAEAL  N+T+  L+L  N
Sbjct: 1   MSDIQADDADAQTIAEALKVNTTVTWLSLRSNRVGAAGAQALAEALKVNTTVTQLYLGDN 60

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA A+A  L  N ++  L +  N IGD G++A+   L      + VL +  N I 
Sbjct: 61  RIGDDGAGAIAAALTVNMTVTRLDMSINEIGDAGVQAIAEALRVNT-TVIVLRLYANQIH 119

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA  +AE +   K++  + L +N IGD GA+ IA+ALK N  +T  +LGGN I   GA
Sbjct: 120 DVGAQALAEALSVNKTVTQLYLQLNQIGDVGAQAIAEALKVNTALTVPNLGGNRIGDAGA 179

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  LK N  +T L L  N IG  GA+A++E LK    +  L L   QIG +GA+ +A
Sbjct: 180 QAIAEALKVNVTVTELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIA 239

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKC 550
             L+ N T++ L L  N +      G  G+     A+ +   +    L  N     GA+ 
Sbjct: 240 QALKLNQTLTTLYLVRNRI------GNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQA 293

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           +A+  K VN+ L  ++L  N+I D GA AIA+ALK N    +T LNL +N
Sbjct: 294 IAEVLK-VNKRLAWLNLPDNQIGDVGAEAIAEALKVN--TTLTYLNLRSN 340



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 148/286 (51%), Gaps = 1/286 (0%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L  N T   +  + N I  AG++A    L+ N  +  L L  N I D G + L + L  N
Sbjct: 74  LTVNMTVTRLDMSINEIGDAGVQAIAEALRVNTTVIVLRLYANQIHDVGAQALAEALSVN 133

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             V +L L    + D GA+AIAE LK N+ L V  L  N I  +G  ++AEAL  N T+ 
Sbjct: 134 KTVTQLYLQLNQIGDVGAQAIAEALKVNTALTVPNLGGNRIGDAGAQAIAEALKVNVTVT 193

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L+ N  G  GA A+A+ L+ + +L +L+L+ N IGD G +A+   L   +  L  L 
Sbjct: 194 ELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIAQALKLNQ-TLTTLY 252

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   G   +AE ++    L  ++L  N   D GA+ IA+ LK N+ +  ++L  N
Sbjct: 253 LVRNRIGNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQAIAEVLKVNKRLAWLNLPDN 312

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
            I   GA AIA  LK N+ +T L+L  N IG   A+A+ E    +G
Sbjct: 313 QIGDVGAEAIAEALKVNTTLTYLNLRSNCIGNTFARAIDEAHHVNG 358



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 35/222 (15%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +++ +N+IGD G + IA+AL+ N T+  + L  N IH  GA A+A  L  N  +T L L 
Sbjct: 83  LDMSINEIGDAGVQAIAEALRVNTTVIVLRLYANQIHDVGAQALAEALSVNKTVTQLYLQ 142

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+A++E LK +  +    LG  +IG +GA+ +A+ L+ N T++ L L  N +
Sbjct: 143 LNQIGDVGAQAIAEALKVNTALTVPNLGGNRIGDAGAQAIAEALKVNVTVTELSLHTNQI 202

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            D                                 GA+ +A++ K V+  LT ++L  N+
Sbjct: 203 GDA--------------------------------GAQAIAEALK-VSPTLTKLNLNENQ 229

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           I D GA AIAQALK N+   +T+L L  N +   G   + +A
Sbjct: 230 IGDAGAQAIAQALKLNQ--TLTTLYLVRNRIGNVGVQPIAEA 269



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 23/227 (10%)

Query: 396 MNDI--GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           M+DI   D  A+ IA+ALK N T+T + L  N + + GA A+A  LK N+ +T L L  N
Sbjct: 1   MSDIQADDADAQTIAEALKVNTTVTWLSLRSNRVGAAGAQALAEALKVNTTVTQLYLGDN 60

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG DGA A++  L  +  +  L +   +IG +G + +A+ LR N T+ +L L AN + D
Sbjct: 61  RIGDDGAGAIAAALTVNMTVTRLDMSINEIGDAGVQAIAEALRVNTTVIVLRLYANQIHD 120

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ-------GAKCLAQSFKVVNEALTSID 566
               G   L+   S   ++  +        YLQ       GA+ +A++ K VN ALT  +
Sbjct: 121 ---VGAQALAEALSVNKTVTQL--------YLQLNQIGDVGAQAIAEALK-VNTALTVPN 168

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           L  N I D GA AIA+ALK N  V VT L+L  N +   G  A+ +A
Sbjct: 169 LGGNRIGDAGAQAIAEALKVN--VTVTELSLHTNQIGDAGAQAIAEA 213



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS  T ++     Q + E  K     + ++++    GD G   +A++L  NQT   +   
Sbjct: 195 LSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIAQALKLNQTLTTLYLV 254

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G++     LQ+N  L  L+L  N   D G + + ++L  N  +  L L    +
Sbjct: 255 RNRIGNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQAIAEVLKVNKRLAWLNLPDNQI 314

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
            D GA+AIAE LK N+ L  L L +N I  +   ++ EA
Sbjct: 315 GDVGAEAIAEALKVNTTLTYLNLRSNCIGNTFARAIDEA 353


>gi|320170766|gb|EFW47665.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 459

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/365 (35%), Positives = 183/365 (50%), Gaps = 67/365 (18%)

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           +L   ++ D GAKAIAE L+ N+++  L+L  N ID +G  ++AE L  N+T        
Sbjct: 4   RLPEEEIGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTT-------- 55

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                               L EL L+GN IGD G R +   L      +  L +  N I
Sbjct: 56  --------------------LTELFLYGNQIGDAGARTIAETLKVNT-SVTSLGLSENQI 94

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              GA  +AE +K   +L W+NL  N IGD GA  IA+ALK N T+TT+DLG N I   G
Sbjct: 95  ---GANAIAEALKVNATLTWLNLGDNQIGDAGARAIAEALKVNTTVTTLDLGKNQIGDAG 151

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A AIA  LK N+ +T L L  N IG  GA+A++E LK +  ++ L LG  +I  +GA  +
Sbjct: 152 AQAIAEALKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPI 211

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
           A+ L+ N T++ LDL  N + +                                 G   +
Sbjct: 212 AEALKVNTTLTALDLGKNQIGN--------------------------------LGMMAI 239

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
           A++ K VN +LT  +L  N+I D+GA AIA+ALK N   +V  LNLA N + K    A+ 
Sbjct: 240 AEALK-VNTSLTEHNLNVNQIGDEGAKAIAEALKVN--TSVKKLNLAFNCIGKVAAQAIQ 296

Query: 612 DAKDL 616
           DA+ L
Sbjct: 297 DARPL 301



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/285 (38%), Positives = 159/285 (55%), Gaps = 4/285 (1%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L    IGD G K + + L  NA V  L L    + D GA+ IAE LK N+ L  L L  N
Sbjct: 5   LPEEEIGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGN 64

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AE L  N+++ SL L+ N    +GANA+A+ L+ N +L  L+L  N IGD
Sbjct: 65  QIGDAGARTIAETLKVNTSVTSLGLSENQ---IGANAIAEALKVNATLTWLNLGDNQIGD 121

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G RA+   L      +  LD+G N I   GA  +AE +K   ++  + L  N IG+ GA
Sbjct: 122 AGARAIAEALKVNT-TVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGA 180

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IA+ LK N+T++ + LG N I   GA+ IA  LK N+ +T+LDL  N IG  G  A++
Sbjct: 181 QAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIA 240

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           E LK + ++    L   QIG  GA+ +A+ L+ N ++  L+L  N
Sbjct: 241 EALKVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFN 285



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/308 (37%), Positives = 164/308 (53%), Gaps = 9/308 (2%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N     +    N I  AG +     L+ N  L  L L GN IGD 
Sbjct: 10  IGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGDA 69

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  V  L LS   +   GA AIAE LK N+ L  L L +N I  +G  +
Sbjct: 70  GARTIAETLKVNTSVTSLGLSENQI---GANAIAEALKVNATLTWLNLGDNQIGDAGARA 126

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T+ +L L  N  G  GA A+A+ L+ N ++  L+L  N IG+ G +A+   
Sbjct: 127 IAEALKVNTTVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGAQAIAET 186

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L   K  L+ L +G+N IS  GA  +AE +K   +L  ++L  N IG+ G   IA+ALK 
Sbjct: 187 LKVNK-TLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKV 245

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV-----LK 468
           N ++T  +L  N I  +GA AIA  LK N+ +  L+LA+N IG   A+A+ +      LK
Sbjct: 246 NTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQDARPLTELK 305

Query: 469 FHGNINTL 476
            +  IN L
Sbjct: 306 LNYQINPL 313



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/289 (37%), Positives = 155/289 (53%), Gaps = 4/289 (1%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG KA    L+ N  +  L+L  N I D G + + + L  N  +  L L    + D GA+
Sbjct: 13  AGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGDAGAR 72

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            IAE LK N+ +  L L+ N I   G  ++AEAL  N+T+  L+L  N  G  GA A+A+
Sbjct: 73  TIAETLKVNTSVTSLGLSENQI---GANAIAEALKVNATLTWLNLGDNQIGDAGARAIAE 129

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ N ++  L L  N IGD G +A+   L      +  L +  N I   GA  +AE +K
Sbjct: 130 ALKVNTTVTTLDLGKNQIGDAGAQAIAEALKVNT-TVTRLYLDQNQIGEAGAQAIAETLK 188

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K+L  + L  N I D GA  IA+ALK N T+T +DLG N I + G  AIA  LK N+ 
Sbjct: 189 VNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTS 248

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           +T  +L  N IG +GAKA++E LK + ++  L L +  IG   A+ + D
Sbjct: 249 LTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQD 297



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 156/304 (51%), Gaps = 13/304 (4%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A+ LR  + V   D+      D G   +AE+L  N T  E+    N I  AG +     
Sbjct: 18  IAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGDAGARTIAET 77

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N ++ +L LS N I   G   + + L  NA +  L L    + D GA+AIAE LK N
Sbjct: 78  LKVNTSVTSLGLSENQI---GANAIAEALKVNATLTWLNLGDNQIGDAGARAIAEALKVN 134

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +  L+L  N I  +G  ++AEAL  N+T+  L+L+ N  G  GA A+A+ L+ NK+L 
Sbjct: 135 TTVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLS 194

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL+L  N I D G   +   L      L  LD+G N I   G   +AE +K   SL   N
Sbjct: 195 ELYLGDNRISDAGATPIAEALKVNT-TLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHN 253

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY- 452
           L +N IGDEGA+ IA+ALK N ++  ++L  N I    A AI    +D   +T L L Y 
Sbjct: 254 LNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAI----QDARPLTELKLNYQ 309

Query: 453 -NPI 455
            NP+
Sbjct: 310 INPL 313



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 4/259 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +T+ E  K     + + + G   GD G   +AE+L  N +   +  + N I   G  A  
Sbjct: 44  RTIAETLKVNTTLTELFLYGNQIGDAGARTIAETLKVNTSVTSLGLSENQI---GANAIA 100

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL  N IGD G + + + L  N  V  L L    + D GA+AIAE LK
Sbjct: 101 EALKVNATLTWLNLGDNQIGDAGARAIAEALKVNTTVTTLDLGKNQIGDAGAQAIAEALK 160

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ +  L L+ N I  +G  ++AE L  N T+  L+L  N     GA  +A+ L+ N +
Sbjct: 161 VNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTT 220

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N IG+ G+ A+   L      L   ++  N I  +GA  +AE +K   S+  
Sbjct: 221 LTALDLGKNQIGNLGMMAIAEALKVNT-SLTEHNLNVNQIGDEGAKAIAEALKVNTSVKK 279

Query: 392 INLYMNDIGDEGAEKIADA 410
           +NL  N IG   A+ I DA
Sbjct: 280 LNLAFNCIGKVAAQAIQDA 298



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 32/255 (12%)

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +IGD GA+ IA+AL+ N  +T +DLG N I   GA  IA  LK N+ +T L L  N IG 
Sbjct: 9   EIGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGD 68

Query: 458 DGAKALSEVLKFHGNINTL--------------------KLGWC-----QIGASGAEFVA 492
            GA+ ++E LK + ++ +L                     L W      QIG +GA  +A
Sbjct: 69  AGARTIAETLKVNTSVTSLGLSENQIGANAIAEALKVNATLTWLNLGDNQIGDAGARAIA 128

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA 552
           + L+ N T++ LDL  N + D   +G   ++       ++  +      I    GA+ +A
Sbjct: 129 EALKVNTTVTTLDLGKNQIGD---AGAQAIAEALKVNTTVTRLYLDQNQIGE-AGAQAIA 184

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           ++ K VN+ L+ + L  N I D GA  IA+ALK N    +T+L+L  N +   G  A+ +
Sbjct: 185 ETLK-VNKTLSELYLGDNRISDAGATPIAEALKVN--TTLTALDLGKNQIGNLGMMAIAE 241

Query: 613 AKDLVYEMSEKEVNI 627
           A  +   ++E  +N+
Sbjct: 242 ALKVNTSLTEHNLNV 256


>gi|320162675|gb|EFW39574.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 925

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 239/475 (50%), Gaps = 12/475 (2%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+   + E  KE R    +D+S    GD G   +  +L        +  + N I   G +
Sbjct: 32  ETAVVIAEGLKENRNLQMLDLSDNQIGDAGAQAIGAALRKKTKLSVLLLSNNKIGETGAR 91

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    LQ++ AL  L +  N IGD G + +   L D A +  L L S  + D GA+AIAE
Sbjct: 92  AIAEGLQTSTALTQLGMHTNQIGDAGAQAIGPALRDKAKLSLLHLESNKIGDAGARAIAE 151

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK ++ L  L +  N++  +G  ++   L   +++  L+L+ N  G  GA A+A GL+ 
Sbjct: 152 GLKTSTTLTKLGMRANLVGDAGAQAIGSVLRNKASLTGLYLDKNTIGDTGARAIADGLQT 211

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
             +L EL ++ N IGD G +A+ + L + K  L++L + +N I   GA  +AE ++   +
Sbjct: 212 TTALTELRMNANQIGDAGAQAIGTALRN-KANLSLLYLNSNRIGDSGAIAIAEGMQMSTA 270

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L+ + +  N IGD GA+ IA  L+    ++ + L  N +   GA A+A  L+ ++ +T L
Sbjct: 271 LIDLRMNTNQIGDAGAQAIASTLRNKANLSILYLDENKVGDAGARAVAEGLQVSTALTRL 330

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            +  N IG  GA+A++  L+   N++ L L   +IG +GA+ +A+ L+    ++ L ++ 
Sbjct: 331 GMDSNRIGHAGAQAIAAALRNKANLSRLSLSNNKIGDTGAQAIAESLQTATALTELGMQT 390

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
           N + D       G     S + +  ++    L  N +   GA+ +A+  + ++ ALT   
Sbjct: 391 NHIGDA------GAQAIGSTLRNKANLSILYLHRNKIGDTGARAIAEGLQTLS-ALTDFR 443

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           +  N+I D GA AI  AL+      ++ L+L+NN ++      L+ +     E S
Sbjct: 444 MNDNQIGDAGAHAIGSALR--NKATLSKLSLSNNQISSSAAQLLSQSVPKTCEFS 496



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 194/389 (49%), Gaps = 3/389 (0%)

Query: 121 SKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLF 180
           ++  AEG+  S       L   T ++     Q +    ++    S + +     GD G  
Sbjct: 90  ARAIAEGLQTSTA--LTQLGMHTNQIGDAGAQAIGPALRDKAKLSLLHLESNKIGDAGAR 147

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +AE L  + T  ++   AN +  AG +A   VL++  +L  L L  N IGD G + + D
Sbjct: 148 AIAEGLKTSTTLTKLGMRANLVGDAGAQAIGSVLRNKASLTGLYLDKNTIGDTGARAIAD 207

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L     +  L++++  + D GA+AI   L+N + L +L LN+N I  SG  ++AE +  
Sbjct: 208 GLQTTTALTELRMNANQIGDAGAQAIGTALRNKANLSLLYLNSNRIGDSGAIAIAEGMQM 267

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           ++ +  L +N N  G  GA A+A  L    +L  L+L  N +GD G RA+  GL      
Sbjct: 268 STALIDLRMNTNQIGDAGAQAIASTLRNKANLSILYLDENKVGDAGARAVAEGLQVSTA- 326

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  L + +N I   GA  +A  ++N  +L  ++L  N IGD GA+ IA++L+    +T +
Sbjct: 327 LTRLGMDSNRIGHAGAQAIAAALRNKANLSRLSLSNNKIGDTGAQAIAESLQTATALTEL 386

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            +  N+I   GA AI   L++ + ++ L L  N IG  GA+A++E L+    +   ++  
Sbjct: 387 GMQTNHIGDAGAQAIGSTLRNKANLSILYLHRNKIGDTGARAIAEGLQTLSALTDFRMND 446

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRAN 509
            QIG +GA  +   LR   T+S L L  N
Sbjct: 447 NQIGDAGAHAIGSALRNKATLSKLSLSNN 475



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 35/246 (14%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E  +  KS  W+NL  + I DE A  IA+ LK+NR +  +DL  N I   GA AI   L+
Sbjct: 11  ELFEIAKSYSWVNLKSSGIADETAVVIAEGLKENRNLQMLDLSDNQIGDAGAQAIGAALR 70

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
             + ++ L L+ N IG  GA+A++E L+    +  L +   QIG +GA+ +   LR    
Sbjct: 71  KKTKLSVLLLSNNKIGETGARAIAEGLQTSTALTQLGMHTNQIGDAGAQAIGPALRDKAK 130

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           +S+L L +N + D                                 GA+ +A+  K  + 
Sbjct: 131 LSLLHLESNKIGDA--------------------------------GARAIAEGLK-TST 157

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 620
            LT + +  N + D GA AI   L+     ++T L L  N +   G  A+ D       +
Sbjct: 158 TLTKLGMRANLVGDAGAQAIGSVLR--NKASLTGLYLDKNTIGDTGARAIADGLQTTTAL 215

Query: 621 SEKEVN 626
           +E  +N
Sbjct: 216 TELRMN 221


>gi|326427735|gb|EGD73305.1| hypothetical protein PTSG_12243 [Salpingoeca sp. ATCC 50818]
          Length = 938

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 189/373 (50%), Gaps = 33/373 (8%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           G  G   +AE+L  N     +    N I   G+ A   +L+ N  + +L+L  N IG EG
Sbjct: 66  GVSGARAVAEALKDNTCLNTLWLGGNNIGDEGVAALAEMLKHNTTMTSLSLWRNDIGPEG 125

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
              L ++L  N  +E L L++  +  EG  A AE+LK+N+ L+ L+L +N I   G T+L
Sbjct: 126 AVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEMLKHNTALKTLDLGDNSITPVGGTAL 185

Query: 295 AEALLENSTIRSLHLNGN----------------------YGGALGANALAKGLEGNKSL 332
             AL +N T+  L + GN                      Y    G  A  +  + NK +
Sbjct: 186 GAALDQNRTLEGLDIKGNSAATARAFGAALPVDREIGTIWYDDKEGKAAFNEARKKNK-I 244

Query: 333 R---------ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           R         E+ L GN +GD   R +   L      L  L + +NSIS KGA  +A+ +
Sbjct: 245 RAIANNTCGDEVRLVGNDLGDSETREVAEALKDNTC-LKELILVHNSISDKGAVALAKVL 303

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+ KSL  +NL  N I  EGA  +A+ LK N TIT + L  N+I  KGA A+A+VLK N+
Sbjct: 304 KHNKSLTELNLQGNSISVEGAVALAEMLKHNTTITGLSLESNSISDKGAVALAKVLKHNT 363

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +  L L  NPI  +GA AL+E+LK +  +  L L    IG  GA  + +ML++N +++ 
Sbjct: 364 TLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLNDNTIGDKGAVAMTEMLKHNKSLTA 423

Query: 504 LDLRANGLRDEVC 516
           L L +N + D+V 
Sbjct: 424 LVLESNSIGDQVA 436



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 184/386 (47%), Gaps = 31/386 (8%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K     +S+ +   + G EG   LAE L +N   EE++ AAN I   G+ AF  +
Sbjct: 101 LAEMLKHNTTMTSLSLWRNDIGPEGAVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEM 160

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS--------------SVDLR 259
           L+ N ALKTL+L  N I   G   L   L  N  +E L +                VD  
Sbjct: 161 LKHNTALKTLDLGDNSITPVGGTALGAALDQNRTLEGLDIKGNSAATARAFGAALPVDRE 220

Query: 260 --------DEGAKAIAELLKNNSILRV--------LELNNNMIDYSGFTSLAEALLENST 303
                    EG  A  E  K N I  +        + L  N +  S    +AEAL +N+ 
Sbjct: 221 IGTIWYDDKEGKAAFNEARKKNKIRAIANNTCGDEVRLVGNDLGDSETREVAEALKDNTC 280

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           ++ L L  N     GA ALAK L+ NKSL EL+L GNSI  EG  AL   L      +  
Sbjct: 281 LKELILVHNSISDKGAVALAKVLKHNKSLTELNLQGNSISVEGAVALAEMLK-HNTTITG 339

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L + +NSIS KGA  +A+ +K+  +L  ++L  N I  EGA  +A+ LK N T+  + L 
Sbjct: 340 LSLESNSISDKGAVALAKVLKHNTTLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLN 399

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I  KGA A+  +LK N  +T+L L  N IG   A AL+EVLK +  +  L LG   I
Sbjct: 400 DNTIGDKGAVAMTEMLKHNKSLTALVLESNSIGDQVAVALAEVLKQNMTLQYLFLGDNSI 459

Query: 484 GASGAEFVADMLRYNNTISILDLRAN 509
              G   +   L  N T+  LD++ N
Sbjct: 460 TPVGGTALGAALDQNRTLEGLDIKGN 485



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 136/286 (47%), Gaps = 37/286 (12%)

Query: 148 RESKQTLNEFAKE--LRAFSS------VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
           +E K   NE  K+  +RA ++      V + G + GD     +AE+L  N   +E+    
Sbjct: 229 KEGKAAFNEARKKNKIRAIANNTCGDEVRLVGNDLGDSETREVAEALKDNTCLKELILVH 288

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I+  G  A   VL+ N +L  LNL GN I  EG   L ++L  N  +  L L S  + 
Sbjct: 289 NSISDKGAVALAKVLKHNKSLTELNLQGNSISVEGAVALAEMLKHNTTITGLSLESNSIS 348

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D+GA A+A++LK+N+ L  L L  N I   G  +LAE L  N+T+  L LN N  G  GA
Sbjct: 349 DKGAVALAKVLKHNTTLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLNDNTIGDKGA 408

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+ + L+ NKSL  L L  NSIGD+   AL                             
Sbjct: 409 VAMTEMLKHNKSLTALVLESNSIGDQVAVAL----------------------------- 439

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           AE +K   +L ++ L  N I   G   +  AL QNRT+  +D+ GN
Sbjct: 440 AEVLKQNMTLQYLFLGDNSITPVGGTALGAALDQNRTLEGLDIKGN 485


>gi|26350999|dbj|BAC39136.1| unnamed protein product [Mus musculus]
          Length = 397

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/392 (33%), Positives = 206/392 (52%), Gaps = 6/392 (1%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S A N I   G KA    L  N +L TL+L  N IG  G K L D L  N  +  L L S
Sbjct: 4   SLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQS 63

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             ++D+G   +AE L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G
Sbjct: 64  NVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIG 123

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ALA+ L+ N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +G
Sbjct: 124 DRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEG 182

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  + + +    +L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+
Sbjct: 183 AQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARAL 242

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
            + L+ N  +T+LDL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L
Sbjct: 243 GQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEAL 302

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
             N T+ ILDLR N +              +S++  L ++   SL ++   GA  +A + 
Sbjct: 303 TVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRL-NLQENSLGMD---GAIFVASAL 358

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
              N  L  I+L  N I +  A  I++A+K N
Sbjct: 359 S-ENHGLHHINLQGNPIGESAARMISEAIKTN 389



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 168/337 (49%), Gaps = 1/337 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 54  RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 113

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L  S N IGD G   L + L  N  +E L L S  + D G   +   L +N  L  L L
Sbjct: 114 ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 173

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  +L +AL  N+T++ L L  N     GA A+A  +  N SL  LHL  N 
Sbjct: 174 RENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNF 233

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +L+ + L +  IG 
Sbjct: 234 IQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGS 292

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GA+ + +AL  NRT+  +DL GN++ + GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 293 QGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAI 352

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            ++  L  +  ++ + L    IG S A  +++ ++ N
Sbjct: 353 FVASALSENHGLHHINLQGNPIGESAARMISEAIKTN 389



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 177/348 (50%), Gaps = 1/348 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 26  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 85

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 86  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 145

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I   G T L  AL  N T+ SL+L  N     GA AL + L  N +L+ L L  N 
Sbjct: 146 QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 205

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G +A+   +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 206 LHDRGAQAIAVAVGENH-SLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 264

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA  +A ALK N T+  + L   +I S+GA A+   L  N  +  LDL  N +GA GAK
Sbjct: 265 EGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAK 324

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           AL+  LK + ++  L L    +G  GA FVA  L  N+ +  ++L+ N
Sbjct: 325 ALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGN 372



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 10/289 (3%)

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G  GA ALA+ L  N+SL  L L  NSIG  G +AL   L   +  L  L + +N I
Sbjct: 8   NQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINR-TLTSLSLQSNVI 66

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              G   VAE + + +++  + L  N IG  GA+++ADALKQNR++  +    N I  +G
Sbjct: 67  KDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRG 126

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A A+A  LK N ++ +LDL  N I   G   L   L  +  +++L L    I   GA+ +
Sbjct: 127 AIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQAL 186

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AK 549
              L  NNT+  LDL AN L D    G   ++      +SL H+    L  N++Q   A+
Sbjct: 187 TQALCRNNTLKHLDLTANLLHDR---GAQAIAVAVGENHSLTHL---HLQWNFIQAGAAR 240

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
            L Q+ ++ N  LT++DL  N I D+GA ++A ALK N  +    L +A
Sbjct: 241 ALGQALQL-NRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVA 288



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 1/299 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 100 QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 159

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 160 RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 219

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 220 ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 279

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L   SIG +G +AL   L+  +  L +LD+  N + A GA  +A  +K   SL  
Sbjct: 280 LIALYLQVASIGSQGAQALGEALTVNR-TLEILDLRGNDVGAAGAKALANALKLNSSLRR 338

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           +NL  N +G +GA  +A AL +N  +  I+L GN I    A  I+  +K N+   ++++
Sbjct: 339 LNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 397



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 94/202 (46%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 181 EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 240

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 241 ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 300

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L  N  L +L+L  N +  +G  +LA AL  NS++R L+L  N  G  GA  +A  L  
Sbjct: 301 ALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 360

Query: 329 NKSLRELHLHGNSIGDEGIRAL 350
           N  L  ++L GN IG+   R +
Sbjct: 361 NHGLHHINLQGNPIGESAARMI 382



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 35/132 (26%)

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           QIG  GA+ +A  L  N ++  LDLR+N +                              
Sbjct: 9   QIGNKGAKALARSLLVNRSLITLDLRSNSIGPP--------------------------- 41

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                GAK LA + K+ N  LTS+ L  N I+DDG   +A+AL +N+ +++  L L  N 
Sbjct: 42  -----GAKALADALKI-NRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISM--LQLQKNL 93

Query: 602 LTKFGQSALTDA 613
           +   G   + DA
Sbjct: 94  IGLIGAQQMADA 105


>gi|326929333|ref|XP_003210821.1| PREDICTED: protein NLRC3-like [Meleagris gallopavo]
          Length = 1102

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 150/449 (33%), Positives = 223/449 (49%), Gaps = 43/449 (9%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
            S+ +    F D  +  L   L       + +S A N I   G KA    L  N +L  L+
Sbjct: 684  SLRLDNNQFKDNVMELLGSVLSVKDCQIQRLSLAENQICNKGAKALARSLMVNRSLTALD 743

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            L  N IG  G K L D L  N  +  L L    +++EGA A+AE L  N  L  L L  N
Sbjct: 744  LRSNSIGPSGAKALADALKKNQVLLSLNLQHNVIKEEGATALAEALLTNHRLITLHLQKN 803

Query: 285  MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
             I   G   LAEAL +N +++ L L+ N      + ALA+ L+ N SL+ L L  NSI +
Sbjct: 804  SIGAHGAKKLAEALAQNCSLKELMLSSN------SXALAEALKVNHSLQSLDLQSNSISN 857

Query: 345  EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
             G+ AL + L S KG L  L++  NSIS +G   +A  ++   +L  ++L  N + DEG 
Sbjct: 858  TGVSALTAALCSNKG-LIDLNLRENSISKEGGPAIAHALRTNCTLKKLDLAANLLHDEGG 916

Query: 405  EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            + IA A+K+N+ +T++ L  N I ++ A A+A+ L+ N  + SLDL  N IG +G  AL+
Sbjct: 917  KAIALAMKENQALTSLHLQWNFIQTQAAVALAQALQSNGSLASLDLQENAIGDEGMAALA 976

Query: 465  EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
              LK +  +  L L    I A+GA+ +A+ L  NN++ +LDLR N +             
Sbjct: 977  AALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSIS------------ 1024

Query: 525  FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                + GAK +A + K VN +L  ++L  N +  DGA  IA AL
Sbjct: 1025 --------------------VAGAKAMANALK-VNRSLRWLNLQENSLGMDGAICIATAL 1063

Query: 585  KANEDVAVTSLNLANNFLTKFGQSALTDA 613
            + N    +T +NL  N + + G   ++DA
Sbjct: 1064 RGNH--GLTYVNLQGNRIGQSGAKMISDA 1090



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 35/366 (9%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G  G   LA++L  NQ    ++   N I   G  A    L +N  L 
Sbjct: 737  RSLTALDLRSNSIGPSGAKALADALKKNQVLLSLNLQHNVIKEEGATALAEALLTNHRLI 796

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL+L  N IG  G K L + L  N  ++ L LSS       + A+AE LK N  L+ L+L
Sbjct: 797  TLHLQKNSIGAHGAKKLAEALAQNCSLKELMLSS------NSXALAEALKVNHSLQSLDL 850

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G ++L  AL  N  +  L+L  N     G  A+A  L  N +L++L L  N 
Sbjct: 851  QSNSISNTGVSALTAALCSNKGLIDLNLRENSISKEGGPAIAHALRTNCTLKKLDLAANL 910

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG +A+   +   +  L  L +  N I  + A  +A+ +++  SL  ++L  N IGD
Sbjct: 911  LHDEGGKAIALAMKENQA-LTSLHLQWNFIQTQAAVALAQALQSNGSLASLDLQENAIGD 969

Query: 402  EGAEKIADALKQNRTIT----------------------------TIDLGGNNIHSKGAS 433
            EG   +A ALK N T+                              +DL GN+I   GA 
Sbjct: 970  EGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVAGAK 1029

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            A+A  LK N  +  L+L  N +G DGA  ++  L+ +  +  + L   +IG SGA+ ++D
Sbjct: 1030 AMANALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQGNRIGQSGAKMISD 1089

Query: 494  MLRYNN 499
             +R N+
Sbjct: 1090 AIRTNS 1095



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 176/345 (51%), Gaps = 29/345 (8%)

Query: 261 EGAKAIAELLKNNSILRVL-ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           E AKA+ E +KN S+  +L  +N + + Y     +++  +E +         N    L  
Sbjct: 621 EIAKAVEEAMKNESLAGMLTPVNCSALAY--LLQVSDVCVEET---------NLSNCLTY 669

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N     L        L L  N   D  +  L S LS +  ++  L +  N I  KGA  +
Sbjct: 670 NICKSLLPQLLFCHSLRLDNNQFKDNVMELLGSVLSVKDCQIQRLSLAENQICNKGAKAL 729

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  +   +SL  ++L  N IG  GA+ +ADALK+N+ + +++L  N I  +GA+A+A  L
Sbjct: 730 ARSLMVNRSLTALDLRSNSIGPSGAKALADALKKNQVLLSLNLQHNVIKEEGATALAEAL 789

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N  + +L L  N IGA GAK L+E L  + ++  L L      +S +  +A+ L+ N+
Sbjct: 790 LTNHRLITLHLQKNSIGAHGAKKLAEALAQNCSLKELML------SSNSXALAEALKVNH 843

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKV 557
           ++  LDL++N + +       G+S   +A+ S K ++  +L  N +  +G   +A + + 
Sbjct: 844 SLQSLDLQSNSISN------TGVSALTAALCSNKGLIDLNLRENSISKEGGPAIAHALR- 896

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            N  L  +DLA N + D+G  AIA A+K N+  A+TSL+L  NF+
Sbjct: 897 TNCTLKKLDLAANLLHDEGGKAIALAMKENQ--ALTSLHLQWNFI 939


>gi|403273426|ref|XP_003928517.1| PREDICTED: protein NLRC3 [Saimiri boliviensis boliviensis]
          Length = 1037

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/394 (33%), Positives = 205/394 (52%), Gaps = 36/394 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAK +A+ LK N  L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKGLADSLKINRTLTSL 727

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N I  +G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ N+ L  L L  
Sbjct: 728  SLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGGAMALAEALKVNQGLESLDLQS 787

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +L  ++L  N +
Sbjct: 788  NSISDAGVAALMGALCTNQALLS-LSLRENSISPEGAQAIARALRANSTLKNLDLTANLL 846

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             D+GA+ IA A+ +NR +T++ L  N I +  A A+ + L+ N  +TSLDL  N IG DG
Sbjct: 847  HDQGAQAIAVAVTENRALTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENDIGDDG 906

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
            A A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR N +        
Sbjct: 907  ACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAI-------- 958

Query: 520  NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             G++                       GAK LA + K VN +L  ++L  N +  DGA  
Sbjct: 959  -GVA-----------------------GAKALANALK-VNSSLRRLNLQENSLGMDGAIF 993

Query: 580  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +A AL  N    +  +NL  N +   G   +++A
Sbjct: 994  VATALSGNHR--LQHINLQGNHIGDSGARMISEA 1025



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 209/447 (46%), Gaps = 35/447 (7%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDANQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L  N IG +G K L D L  N  +  L L    +   GA+ +A+
Sbjct: 685  ALARSLLVNRSLTSLDLRSNSIGPQGAKGLADSLKINRTLTSLSLQKNSIGPTGAQWMAD 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             LK N  L+ L L++N I   G  +LAEAL  N  + SL L  N     G  AL   L  
Sbjct: 745  ALKQNRSLKELMLSSNSIGDGGAMALAEALKVNQGLESLDLQSNSISDAGVAALMGALCT 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N++L  L L  NSI  EG +A+   L +    L  LD+  N +  +GA  +A  +   ++
Sbjct: 805  NQALLSLSLRENSISPEGAQAIARALRA-NSTLKNLDLTANLLHDQGAQAIAVAVTENRA 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N I    A+ +  AL+ NR++T++DL  N+I   GA A+AR LK N+ +T+L
Sbjct: 864  LTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENDIGDDGACAVARALKVNTALTAL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
             L    IGA GA+ L E L  +  +  L L    IG +GA+ +A+ L+ N+++  L+L+ 
Sbjct: 924  YLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQE 983

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N L      G +G  F  +A+                             N  L  I+L 
Sbjct: 984  NSL------GMDGAIFVATALSG---------------------------NHRLQHINLQ 1010

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSL 595
             N I D GA  I++A+K N       +
Sbjct: 1011 GNHIGDSGARMISEAIKTNAPTCTVEM 1037



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 133/397 (33%), Positives = 195/397 (49%), Gaps = 41/397 (10%)

Query: 211 DGVLQSNIA----LKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKA 265
            GVLQS +      + L L  N   D  ++ L  +L   +  ++++ L+   + ++GAKA
Sbjct: 626 QGVLQSLLPQLLYCRKLRLDANQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKA 685

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +A  L  N  L  L+L +N I   G   LA++L  N T+ SL L  N  G  GA  +A  
Sbjct: 686 LARSLLVNRSLTSLDLRSNSIGPQGAKGLADSLKINRTLTSLSLQKNSIGPTGAQWMADA 745

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N+SL+EL L  NSIGD G  AL   L   +G L  LD+ +NSIS  G   +   +  
Sbjct: 746 LKQNRSLKELMLSSNSIGDGGAMALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCT 804

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            ++LL ++L  N I  EGA+ IA AL+ N T+  +DL  N +H +GA AIA  + +N  +
Sbjct: 805 NQALLSLSLRENSISPEGAQAIARALRANSTLKNLDLTANLLHDQGAQAIAVAVTENRAL 864

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           TSL L +N I A  A+AL + L+ + ++ +L L    IG  GA  VA  L+ N  ++ L 
Sbjct: 865 TSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENDIGDDGACAVARALKVNTALTALY 924

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSI 565
           L+   +                                   GA+ L ++   VN  L  +
Sbjct: 925 LQVASIGAP--------------------------------GAQVLGEAL-AVNRTLEIL 951

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
           DL  N I   GA A+A ALK N   ++  LNL  N L
Sbjct: 952 DLRGNAIGVAGAKALANALKVNS--SLRRLNLQENSL 986


>gi|345309115|ref|XP_003428791.1| PREDICTED: protein NLRC3 [Ornithorhynchus anatinus]
          Length = 992

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/309 (36%), Positives = 163/309 (52%), Gaps = 30/309 (9%)

Query: 169 MSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           M    F D  +  LA  L G +   E++S A N I+  G KA    L  N +L TL+L G
Sbjct: 713 MDSNQFQDSVMELLASVLSGKDCLIEKLSLAENEISNKGAKALARSLMVNRSLTTLDLRG 772

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N IG +G                            AKA+A+ LK N +L  L L NN I 
Sbjct: 773 NSIGPQG----------------------------AKALADALKINRVLMSLNLQNNKIK 804

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
             G  +LA  L  N+T+  LHL  N  G +GA  LA  L+ N++L++L   GN  G+EG 
Sbjct: 805 DDGAKALAHVLSTNNTLSVLHLQKNSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGS 864

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            AL   L   +G L  LD+ +NSIS  G   + + + + K+L+ +NL  N IG EGA +I
Sbjct: 865 EALAEALKLNQG-LITLDLQSNSISNAGILALTQALCSNKTLINLNLRENSIGSEGAREI 923

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           A AL+ NRT+  +DL  N +  +GA A+A  +K+N  +TSL L +N I +   KAL++ L
Sbjct: 924 ASALRANRTLKDLDLAANLLREEGAQALAVAVKENQTLTSLHLQWNFIQSSATKALAQAL 983

Query: 468 KFHGNINTL 476
           +F+ ++ +L
Sbjct: 984 QFNRSLTSL 992



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 149/283 (52%), Gaps = 11/283 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L +  N   D  +  L S LS +   +  L +  N IS KGA  +A  +   +SL  +
Sbjct: 709 RNLRMDSNQFQDSVMELLASVLSGKDCLIEKLSLAENEISNKGAKALARSLMVNRSLTTL 768

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NR + +++L  N I   GA A+A VL  N+ ++ L L  
Sbjct: 769 DLRGNSIGPQGAKALADALKINRVLMSLNLQNNKIKDDGAKALAHVLSTNNTLSVLHLQK 828

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GAK L+  LK +  +  L       G  G+E +A+ L+ N  +  LDL++N + 
Sbjct: 829 NSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSIS 888

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           +       G+     A+ S K ++  +L  N +  +GA+ +A + +  N  L  +DLA N
Sbjct: 889 NA------GILALTQALCSNKTLINLNLRENSIGSEGAREIASALR-ANRTLKDLDLAAN 941

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +R++GA A+A A+K N+   +TSL+L  NF+      AL  A
Sbjct: 942 LLREEGAQALAVAVKENQ--TLTSLHLQWNFIQSSATKALAQA 982



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 166/346 (47%), Gaps = 65/346 (18%)

Query: 251 LQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           L++ S   +D   + +A +L   + ++  L L  N I   G  +LA +L+ N ++ +L L
Sbjct: 711 LRMDSNQFQDSVMELLASVLSGKDCLIEKLSLAENEISNKGAKALARSLMVNRSLTTLDL 770

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
            GN  G  GA ALA  L+ N+ L  L+L  N I D+G +AL   LS+    L+VL +  N
Sbjct: 771 RGNSIGPQGAKALADALKINRVLMSLNLQNNKIKDDGAKALAHVLST-NNTLSVLHLQKN 829

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           SI   GA  +A  +K  ++L  +    N  G+EG+E +A+ALK N+ + T+DL  N+I +
Sbjct: 830 SIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSISN 889

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            G  A+ + L  N  + +L+L  N IG++GA+                            
Sbjct: 890 AGILALTQALCSNKTLINLNLRENSIGSEGARE--------------------------- 922

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK 549
            +A  LR N T+  LDL AN LR+E                                GA+
Sbjct: 923 -IASALRANRTLKDLDLAANLLREE--------------------------------GAQ 949

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            LA + K  N+ LTS+ L +N I+     A+AQAL+ N   ++TSL
Sbjct: 950 ALAVAVK-ENQTLTSLHLQWNFIQSSATKALAQALQFNR--SLTSL 992



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 29/259 (11%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +++D+ G + G +G   LA++L  N+    ++   N I   G KA   VL +N  L 
Sbjct: 763 RSLTTLDLRGNSIGPQGAKALADALKINRVLMSLNLQNNKIKDDGAKALAHVLSTNNTLS 822

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  N IG  G K L   L  N  +++L  S     +EG++A+AE LK N  L  L+L
Sbjct: 823 VLHLQKNSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDL 882

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G  +L +AL  N T+ +L+L  N  G+ GA  +A  L  N++L++L L  N 
Sbjct: 883 QSNSISNAGILALTQALCSNKTLINLNLRENSIGSEGAREIASALRANRTLKDLDLAANL 942

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + +EG +AL                             A  +K  ++L  ++L  N I  
Sbjct: 943 LREEGAQAL-----------------------------AVAVKENQTLTSLHLQWNFIQS 973

Query: 402 EGAEKIADALKQNRTITTI 420
              + +A AL+ NR++T++
Sbjct: 974 SATKALAQALQFNRSLTSL 992



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 81/156 (51%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +TL    K+ R    +  SG   G+EG   LAE+L  NQ    +   +N I+ AGI A  
Sbjct: 837 KTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSISNAGILALT 896

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L SN  L  LNL  N IG EG + +   L  N  ++ L L++  LR+EGA+A+A  +K
Sbjct: 897 QALCSNKTLINLNLRENSIGSEGAREIASALRANRTLKDLDLAANLLREEGAQALAVAVK 956

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            N  L  L L  N I  S   +LA+AL  N ++ SL
Sbjct: 957 ENQTLTSLHLQWNFIQSSATKALAQALQFNRSLTSL 992


>gi|320170651|gb|EFW47550.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 513

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/307 (36%), Positives = 166/307 (54%), Gaps = 29/307 (9%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A ++A    L+ N  L  L++  + + D+G K   + L  N  +  L+L+   + D GAK
Sbjct: 30  ADVQAVAEGLKVNTTLTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQNQIGDAGAK 89

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N+ L  L L  N I  +G  ++AEAL  N+T+R+L+L+ N  G  GA A+A+
Sbjct: 90  AIAEALKVNTTLTKLNLWANQIGEAGAQAIAEALKVNATLRTLYLDRNQIGDAGAKAIAE 149

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ N +LR L+L  N  GD G++A                             +A+ ++
Sbjct: 150 ALKVNATLRTLYLDRNQFGDAGVQA-----------------------------IAKALQ 180

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K+L W+NL    IGD GA+ +A+AL+ N T+  + L  N +   GA AIA  LK N++
Sbjct: 181 VNKTLSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLGDAGAQAIAEALKSNTM 240

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +T LDL  N IG  GA+A++E LK +  +  L L   QIG  GA+  A+ LR N T+  L
Sbjct: 241 LTFLDLWANQIGEAGAQAIAEALKMNSTLIQLFLNGNQIGDFGAKAFAEALRVNMTVQRL 300

Query: 505 DLRANGL 511
           DL  NG+
Sbjct: 301 DLTGNGI 307



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/294 (37%), Positives = 155/294 (52%), Gaps = 4/294 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +DM   +  D+G    AE+L  N T  E+    N I  AG KA    L+ N  L  L
Sbjct: 45  LTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQNQIGDAGAKAIAEALKVNTTLTKL 104

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NL  N IG+ G + + + L  NA +  L L    + D GAKAIAE LK N+ LR L L+ 
Sbjct: 105 NLWANQIGEAGAQAIAEALKVNATLRTLYLDRNQIGDAGAKAIAEALKVNATLRTLYLDR 164

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N    +G  ++A+AL  N T+  L+L     G  GA ALA+ L  N +L  L+L  N +G
Sbjct: 165 NQFGDAGVQAIAKALQVNKTLSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLG 224

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G +A+   L S    L  LD+  N I   GA  +AE +K   +L+ + L  N IGD G
Sbjct: 225 DAGAQAIAEALKSNT-MLTFLDLWANQIGEAGAQAIAEALKMNSTLIQLFLNGNQIGDFG 283

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAI--ARVLKDNSVITSLDLAYNPI 455
           A+  A+AL+ N T+  +DL GN I + GA AI  AR + D   + ++D   NP+
Sbjct: 284 AKAFAEALRVNMTVQRLDLTGNGIGNLGAQAIDEARQVNDKCRV-NIDSQINPL 336



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 169/326 (51%), Gaps = 40/326 (12%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AE L  N+T+  L +  ++    GA A A+ LE N +L EL L+ N IGD G +A   
Sbjct: 34  AVAEGLKVNTTLTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQNQIGDAGAKA--- 90

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                                     +AE +K   +L  +NL+ N IG+ GA+ IA+ALK
Sbjct: 91  --------------------------IAEALKVNTTLTKLNLWANQIGEAGAQAIAEALK 124

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+ T+ L  N I   GA AIA  LK N+ + +L L  N  G  G +A+++ L+ +  
Sbjct: 125 VNATLRTLYLDRNQIGDAGAKAIAEALKVNATLRTLYLDRNQFGDAGVQAIAKALQVNKT 184

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           ++ L L   QIG +GA+ +A+ LR N T+++L LR N L D   +G   ++    A+ S 
Sbjct: 185 LSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLGD---AGAQAIA---EALKSN 238

Query: 533 KHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
             + F  L  N +   GA+ +A++ K +N  L  + L  N+I D GA A A+AL+ N  +
Sbjct: 239 TMLTFLDLWANQIGEAGAQAIAEALK-MNSTLIQLFLNGNQIGDFGAKAFAEALRVN--M 295

Query: 591 AVTSLNLANNFLTKFGQSALTDAKDL 616
            V  L+L  N +   G  A+ +A+ +
Sbjct: 296 TVQRLDLTGNGIGNLGAQAIDEARQV 321



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 120/224 (53%), Gaps = 15/224 (6%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  + +G    + +A+ LK N T+T +D+  +++   GA A A  L+ N+ +T L L  N
Sbjct: 22  LRWDRLGVADVQAVAEGLKVNTTLTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQN 81

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GAKA++E LK +  +  L L   QIG +GA+ +A+ L+ N T+  L L  N + D
Sbjct: 82  QIGDAGAKAIAEALKVNTTLTKLNLWANQIGEAGAQAIAEALKVNATLRTLYLDRNQIGD 141

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ----GAKCLAQSFKVVNEALTSIDLAF 569
              +G   ++       +L+     +L ++  Q    G + +A++ + VN+ L+ ++L  
Sbjct: 142 ---AGAKAIAEALKVNATLR-----TLYLDRNQFGDAGVQAIAKALQ-VNKTLSWLNLID 192

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +I D GA A+A+AL+ N  +AV  L L  N L   G  A+ +A
Sbjct: 193 KQIGDAGAQALAEALRVNATLAV--LYLRENRLGDAGAQAIAEA 234


>gi|320166420|gb|EFW43319.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 892

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 234/478 (48%), Gaps = 14/478 (2%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    + E  KE     ++ + G   GD G   +  +L +      +    N I   G +
Sbjct: 9   EDAVVIAEGLKENLNLQALMLEGNQIGDVGAQAIGSALRHTPKLFILFLGENKIGDIGAR 68

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    +Q   AL  L ++ N IGD G + +   L + AG+  L L    + D GA+AIAE
Sbjct: 69  AIGEGMQMLRALGDLRINANQIGDAGAQAIGAALRNKAGLSILCLEKNKIGDVGARAIAE 128

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L+ + IL  L +N N I  +G  ++  AL   S++  L L  N  G  GA A+A+GL+ 
Sbjct: 129 GLQTSKILGALRINANQIGDAGAQAIGLALRNKSSLAFLELGTNKIGDTGARAIAEGLKK 188

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           + +L  L +  N IGD G +A+ S L + K KLA L + +N I   GA  +AE ++    
Sbjct: 189 SPALTRLLMDKNQIGDAGAQAIGSALRN-KAKLATLHLSSNKIGDTGARAIAESLRTSAE 247

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  + ++ N IGD GA+ I  AL  N+ ++ +DL  N I   GASAIA  L+    +  L
Sbjct: 248 LTELRMHTNQIGDAGAQAIGSALL-NKVLSRLDLAKNKIGDAGASAIADGLQMLRALAHL 306

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           ++  N IG  GA+A+   L+   +++ + LG  +IG +GA  +AD LR +  +  L + A
Sbjct: 307 EMNNNHIGNVGAQAIGSALRNKADLSIVDLGSNKIGDAGACAIADGLRSSTALLTLGMHA 366

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
           N + D       G     SA+ +  ++    +  N +   GA  +A+  +  + ALT   
Sbjct: 367 NQIGDM------GAQAIGSALRNKANLSVLLMGSNKIGDAGACAIAEGLQ-TSTALTDFK 419

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLN---LANNFLTKFGQSALTDAKDLVYEMS 621
           +  N+I D GA AI  +L+    +A+  L+   ++ + + +  QS   D + L    S
Sbjct: 420 MHVNQIGDTGALAIESSLRNKPLLAILHLSRNQISASAVQRLSQSIPADCEFLAENQS 477



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 181/356 (50%), Gaps = 2/356 (0%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           AG ++L     K+     + + E  +  +   ++ ++    GD G   +  +L    +  
Sbjct: 106 AGLSILCLEKNKIGDVGARAIAEGLQTSKILGALRINANQIGDAGAQAIGLALRNKSSLA 165

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +    N I   G +A    L+ + AL  L +  N IGD G + +   L + A +  L L
Sbjct: 166 FLELGTNKIGDTGARAIAEGLKKSPALTRLLMDKNQIGDAGAQAIGSALRNKAKLATLHL 225

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           SS  + D GA+AIAE L+ ++ L  L ++ N I  +G  ++  ALL N  +  L L  N 
Sbjct: 226 SSNKIGDTGARAIAESLRTSAELTELRMHTNQIGDAGAQAIGSALL-NKVLSRLDLAKNK 284

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA+A+A GL+  ++L  L ++ N IG+ G +A+ S L + K  L+++D+G+N I  
Sbjct: 285 IGDAGASAIADGLQMLRALAHLEMNNNHIGNVGAQAIGSALRN-KADLSIVDLGSNKIGD 343

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  +A+ +++  +LL + ++ N IGD GA+ I  AL+    ++ + +G N I   GA 
Sbjct: 344 AGACAIADGLRSSTALLTLGMHANQIGDMGAQAIGSALRNKANLSVLLMGSNKIGDAGAC 403

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           AIA  L+ ++ +T   +  N IG  GA A+   L+    +  L L   QI AS  +
Sbjct: 404 AIAEGLQTSTALTDFKMHVNQIGDTGALAIESSLRNKPLLAILHLSRNQISASAVQ 459


>gi|452819047|gb|EME26151.1| FBox-LRR protein [Galdieria sulphuraria]
          Length = 667

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 181/320 (56%), Gaps = 1/320 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ +   I++ G++     L+ N  L  L++  N I  EGV+ L + L  N  +  L ++
Sbjct: 1   MNLSLKSISSEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDIN 60

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           + ++  EG + ++E LK N+ L  L++  N +   G   L+EAL  N+T+  L +  N  
Sbjct: 61  NNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKI 120

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
              G   L++ L+ N +L EL ++ N+I  EG++ L   L      L  LDIG N+++++
Sbjct: 121 ALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVN-NTLTKLDIGYNNVASE 179

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G  +++E +K   +L  +++  N I  EG + +++ALK N T+T +D+G NN+ S+G   
Sbjct: 180 GVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTKLDIGYNNVDSEGVQY 239

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           ++  LK N+ +T LD+ YN I ++G + LSE LK +  +  L +    + + GA+++++ 
Sbjct: 240 LSEALKVNNTLTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIVCNNVASEGAQYLSEA 299

Query: 495 LRYNNTISILDLRANGLRDE 514
           L+ NNT++ LD+  N +  E
Sbjct: 300 LKVNNTLTELDISGNAIPSE 319



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 185/350 (52%), Gaps = 36/350 (10%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           + LS   +  EG + ++E LK N+ L  L++ +N I   G   L+EAL  N+T+  L +N
Sbjct: 1   MNLSLKSISSEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDIN 60

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   L++ L+ N +L +L +  N++  EG++ L   L      L  LDI +N 
Sbjct: 61  NNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVN-NTLTELDIRSNK 119

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+ +G  +++E +K   +L  +++  N+I  EG + +++ALK N T+T +D+G NN+ S+
Sbjct: 120 IALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASE 179

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G   ++  LK N+ +T LD+  N I  +G + LSE LK +  +  L +G+  + + G ++
Sbjct: 180 GVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTKLDIGYNNVDSEGVQY 239

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +++ L+ NNT++ LD+  N +  E                                G + 
Sbjct: 240 LSEALKVNNTLTKLDIGYNNIASE--------------------------------GVQY 267

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           L+++ KV N  LT +++  N +  +GA  +++ALK N    +T L+++ N
Sbjct: 268 LSEALKV-NNTLTKLNIVCNNVASEGAQYLSEALKVNN--TLTELDISGN 314



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 169/314 (53%), Gaps = 1/314 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q L+E  K     + +D+       EG+ +L+E+L  N T  E+    N I + G++
Sbjct: 11  EGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASEGVQ 70

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+ N  L  L++  N +  EGV+ L + L  N  +  L + S  +  EG + ++E
Sbjct: 71  YLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSE 130

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N+ L  L++NNN I   G   L+EAL  N+T+  L +  N   + G   L++ L+ 
Sbjct: 131 ALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKV 190

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L EL +  N I  EG++ L   L      L  LDIG N++ ++G  +++E +K   +
Sbjct: 191 NNTLTELDIRSNKIALEGVQYLSEALKVN-NTLTKLDIGYNNVDSEGVQYLSEALKVNNT 249

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  +++  N+I  EG + +++ALK N T+T +++  NN+ S+GA  ++  LK N+ +T L
Sbjct: 250 LTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIVCNNVASEGAQYLSEALKVNNTLTEL 309

Query: 449 DLAYNPIGADGAKA 462
           D++ N I ++  +A
Sbjct: 310 DISGNAIPSEDIRA 323



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 161/301 (53%), Gaps = 2/301 (0%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           + K+  E  Q L+E  K     + +D++  N   EG+ +L+E+L  N T  ++    N +
Sbjct: 33  SNKIALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNV 92

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
            + G++     L+ N  L  L++  N I  EGV+ L + L  N  +  L +++ ++  EG
Sbjct: 93  ASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASEG 152

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            + ++E LK N+ L  L++  N +   G   L+EAL  N+T+  L +  N     G   L
Sbjct: 153 VQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYL 212

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           ++ L+ N +L +L +  N++  EG++ L   L      L  LDIG N+I+++G  +++E 
Sbjct: 213 SEALKVNNTLTKLDIGYNNVDSEGVQYLSEALKVN-NTLTKLDIGYNNIASEGVQYLSEA 271

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-IARVLKD 441
           +K   +L  +N+  N++  EGA+ +++ALK N T+T +D+ GN I S+   A I   LK 
Sbjct: 272 LKVNNTLTKLNIVCNNVASEGAQYLSEALKVNNTLTELDISGNAIPSEDIRAKIHPYLKR 331

Query: 442 N 442
           N
Sbjct: 332 N 332



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 142/279 (50%), Gaps = 36/279 (12%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L   SI  EG++ L   L      L  LDI +N I+ +G  +++E +K   +L  +++
Sbjct: 1   MNLSLKSISSEGVQYLSEALKVN-NTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDI 59

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+I  EG + +++ALK N T+T +D+G NN+ S+G   ++  LK N+ +T LD+  N 
Sbjct: 60  NNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNK 119

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G + LSE LK +  +  L +    I + G +++++ L+ NNT++ LD+  N +  E
Sbjct: 120 IALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASE 179

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                           G + L+++ KV N  LT +D+  N+I  
Sbjct: 180 --------------------------------GVQYLSEALKV-NNTLTELDIRSNKIAL 206

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +G   +++ALK N    +T L++  N +   G   L++A
Sbjct: 207 EGVQYLSEALKVNN--TLTKLDIGYNNVDSEGVQYLSEA 243


>gi|320166877|gb|EFW43776.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1057

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 227/461 (49%), Gaps = 13/461 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S++M G   G+ G   +  S       + +   +N I   G +A    L+ + AL    +
Sbjct: 191 SLNMYGNQIGNAGAQAIGSSFRNKAALKILQLGSNKIGDVGARAIAAGLRKSAALIYCCM 250

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N IGD G + +   L + A +  L L +  + D GA AIAE L+ ++ L  L +  N 
Sbjct: 251 QANQIGDAGAQAIGFALRNKANLSELSLEANKIGDAGACAIAEGLQMSTSLTQLRMQTNY 310

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I  +G  ++  AL   + +  L+L+ N  G  GA A+A+GL  + SL +  +  N IG+ 
Sbjct: 311 IGDAGAQAIGYALRNKAKLSVLYLSENRIGDAGARAVAEGLHTSTSLTDFKMQANYIGNA 370

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G +A+ S L  +   L++L + NN I   GA  +AE ++   +L  + ++ N IGDEGA+
Sbjct: 371 GAQAIGSALR-KTANLSLLSLTNNKIGDTGASAIAEGLQASTALTQLGMHANQIGDEGAQ 429

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            I  AL+    ++ +DL  N I   GASAIA  L+ ++ +T   +  N IG  GA+A+  
Sbjct: 430 AIGSALRNKPNLSLLDLAKNKIGDTGASAIAEGLQGSTALTRFGMNNNQIGNVGAQAIGS 489

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+   ++  + LG  +IG +GA  +AD LR +  +  L + AN + D       G    
Sbjct: 490 ALRNKADLAIVHLGSNKIGDAGACAIADGLRSSTALLALGMHANHIGD------TGAQAI 543

Query: 526 HSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
            SA+ +  ++    +  N +   GA  +A+  +  + ALT   +  N+I D GA AI  +
Sbjct: 544 GSALRNKANLSVLLMGSNKIGDAGACAIAEGLQT-STALTDFKMHINQIGDAGALAIESS 602

Query: 584 LKANEDVAVTSLN---LANNFLTKFGQSALTDAKDLVYEMS 621
           L+    +A+  L+   ++ + + +  QS   D + L    S
Sbjct: 603 LRNKPQLAILHLSRNQISASAVQRLSQSIPADCEFLAENQS 643



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 229/451 (50%), Gaps = 11/451 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +DM+     D G   +AE L    T+  +    N I  AG +A    L++ ++L  
Sbjct: 51  SLAHLDMNDNKISDAGACAIAEGL---TTSTALKIDTNQIGDAGAQAIGSALRNKLSLAH 107

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N IGD G + + + L  + G+  L +    + + GA+AI    +N + L +L+L 
Sbjct: 108 LDLSNNKIGDAGARAIAEGLQTSTGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCILDLR 167

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN I  +G  ++AE L  ++ + SL++ GN  G  GA A+        +L+ L L  N I
Sbjct: 168 NNKIGDAGARAIAEGLQTSTGLLSLNMYGNQIGNAGAQAIGSSFRNKAALKILQLGSNKI 227

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G RA+ +GL  +   L    +  N I   GA  +   ++N  +L  ++L  N IGD 
Sbjct: 228 GDVGARAIAAGL-RKSAALIYCCMQANQIGDAGAQAIGFALRNKANLSELSLEANKIGDA 286

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA+ L+ + ++T + +  N I   GA AI   L++ + ++ L L+ N IG  GA+A
Sbjct: 287 GACAIAEGLQMSTSLTQLRMQTNYIGDAGAQAIGYALRNKAKLSVLYLSENRIGDAGARA 346

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           ++E L    ++   K+    IG +GA+ +   LR    +S+L L  N + D   +G + +
Sbjct: 347 VAEGLHTSTSLTDFKMQANYIGNAGAQAIGSALRKTANLSLLSLTNNKIGD---TGASAI 403

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
           +    A  +L  +  ++  I   +GA+ +  + +     L+ +DLA N+I D GA AIA+
Sbjct: 404 AEGLQASTALTQLGMHANQIGD-EGAQAIGSALR-NKPNLSLLDLAKNKIGDTGASAIAE 461

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            L+ +   A+T   + NN +   G  A+  A
Sbjct: 462 GLQGS--TALTRFGMNNNQIGNVGAQAIGSA 490



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 209/401 (52%), Gaps = 15/401 (3%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L+ L+L  N IGD G + +   L +   +  L ++   + D GA AIAE L  +
Sbjct: 18  LKENSILQRLDLCDNQIGDAGAQAIGSALRNKLSLAHLDMNDNKISDAGACAIAEGLTTS 77

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L++   + N I  +G  ++  AL    ++  L L+ N  G  GA A+A+GL+ +  L 
Sbjct: 78  TALKI---DTNQIGDAGAQAIGSALRNKLSLAHLDLSNNKIGDAGARAIAEGLQTSTGLL 134

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L+++GN IG+ G +A+ S   + K  L +LD+ NN I   GA  +AE ++    LL +N
Sbjct: 135 SLNIYGNQIGNAGAQAIGSSFRN-KANLCILDLRNNKIGDAGARAIAEGLQTSTGLLSLN 193

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +Y N IG+ GA+ I  + +    +  + LG N I   GA AIA  L+ ++ +    +  N
Sbjct: 194 MYGNQIGNAGAQAIGSSFRNKAALKILQLGSNKIGDVGARAIAAGLRKSAALIYCCMQAN 253

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A+   L+   N++ L L   +IG +GA  +A+ L+ + +++ L ++ N + D
Sbjct: 254 QIGDAGAQAIGFALRNKANLSELSLEANKIGDAGACAIAEGLQMSTSLTQLRMQTNYIGD 313

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
              +G   + +   A+ +   +    L  N +   GA+ +A+     + +LT   +  N 
Sbjct: 314 ---AGAQAIGY---ALRNKAKLSVLYLSENRIGDAGARAVAEGLH-TSTSLTDFKMQANY 366

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           I + GA AI  AL+   ++++  L+L NN +   G SA+ +
Sbjct: 367 IGNAGAQAIGSALRKTANLSL--LSLTNNKIGDTGASAIAE 405



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 211/454 (46%), Gaps = 14/454 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +D+S    GD G   +AE L  +     ++   N I  AG +A     ++   L  
Sbjct: 104 SLAHLDLSNNKIGDAGARAIAEGLQTSTGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCI 163

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N IGD G + + + L  + G+  L +    + + GA+AI    +N + L++L+L 
Sbjct: 164 LDLRNNKIGDAGARAIAEGLQTSTGLLSLNMYGNQIGNAGAQAIGSSFRNKAALKILQLG 223

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G  ++A  L +++ +    +  N  G  GA A+   L    +L EL L  N I
Sbjct: 224 SNKIGDVGARAIAAGLRKSAALIYCCMQANQIGDAGAQAIGFALRNKANLSELSLEANKI 283

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G  A+  GL      L  L +  N I   GA  +   ++N   L  + L  N IGD 
Sbjct: 284 GDAGACAIAEGLQMST-SLTQLRMQTNYIGDAGAQAIGYALRNKAKLSVLYLSENRIGDA 342

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  +A+ L  + ++T   +  N I + GA AI   L+  + ++ L L  N IG  GA A
Sbjct: 343 GARAVAEGLHTSTSLTDFKMQANYIGNAGAQAIGSALRKTANLSLLSLTNNKIGDTGASA 402

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           ++E L+    +  L +   QIG  GA+ +   LR    +S+LDL  N + D       G 
Sbjct: 403 IAEGLQASTALTQLGMHANQIGDEGAQAIGSALRNKPNLSLLDLAKNKIGD------TGA 456

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFA 579
           S     +     +  + +  N +   GA+ +  + +  N+A L  + L  N+I D GA A
Sbjct: 457 SAIAEGLQGSTALTRFGMNNNQIGNVGAQAIGSALR--NKADLAIVHLGSNKIGDAGACA 514

Query: 580 IAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           IA  L+++   A+ +L +  N +   G  A+  A
Sbjct: 515 IADGLRSS--TALLALGMHANHIGDTGAQAIGSA 546



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 190/362 (52%), Gaps = 15/362 (4%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +S + + DE A  IAE LK NSIL+ L+L +N I  +G  ++  AL    ++  L +N N
Sbjct: 1   MSKLGITDEDALVIAEGLKENSILQRLDLCDNQIGDAGAQAIGSALRNKLSLAHLDMNDN 60

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                GA A+A+GL  + +L+   +  N IGD G +A+ S L + K  LA LD+ NN I 
Sbjct: 61  KISDAGACAIAEGLTTSTALK---IDTNQIGDAGAQAIGSALRN-KLSLAHLDLSNNKIG 116

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA  +AE ++    LL +N+Y N IG+ GA+ I  + +    +  +DL  N I   GA
Sbjct: 117 DAGARAIAEGLQTSTGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCILDLRNNKIGDAGA 176

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  L+ ++ + SL++  N IG  GA+A+    +    +  L+LG  +IG  GA  +A
Sbjct: 177 RAIAEGLQTSTGLLSLNMYGNQIGNAGAQAIGSSFRNKAALKILQLGSNKIGDVGARAIA 236

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKC 550
             LR +  +    ++AN + D   +G   + F   A+ +  ++   SL  N +   GA  
Sbjct: 237 AGLRKSAALIYCCMQANQIGD---AGAQAIGF---ALRNKANLSELSLEANKIGDAGACA 290

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           +A+  + ++ +LT + +  N I D GA AI  AL+    ++V  L L+ N +   G  A+
Sbjct: 291 IAEGLQ-MSTSLTQLRMQTNYIGDAGAQAIGYALRNKAKLSV--LYLSENRIGDAGARAV 347

Query: 611 TD 612
            +
Sbjct: 348 AE 349



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 32/275 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S + ++    GD G   +AE L  +    ++   AN I   G +A    L++   L  L
Sbjct: 385 LSLLSLTNNKIGDTGASAIAEGLQASTALTQLGMHANQIGDEGAQAIGSALRNKPNLSLL 444

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IG                            D GA AIAE L+ ++ L    +NN
Sbjct: 445 DLAKNKIG----------------------------DTGASAIAEGLQGSTALTRFGMNN 476

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++  AL   + +  +HL  N  G  GA A+A GL  + +L  L +H N IG
Sbjct: 477 NQIGNVGAQAIGSALRNKADLAIVHLGSNKIGDAGACAIADGLRSSTALLALGMHANHIG 536

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G +A+ S L + K  L+VL +G+N I   GA  +AE ++   +L    +++N IGD G
Sbjct: 537 DTGAQAIGSALRN-KANLSVLLMGSNKIGDAGACAIAEGLQTSTALTDFKMHINQIGDAG 595

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           A  I  +L+    +  + L  N I    ASA+ R+
Sbjct: 596 ALAIESSLRNKPQLAILHLSRNQIS---ASAVQRL 627



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 2/257 (0%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           A  +LLS    K+       + E  +   A + + M     GDEG   +  +L       
Sbjct: 383 ANLSLLSLTNNKIGDTGASAIAEGLQASTALTQLGMHANQIGDEGAQAIGSALRNKPNLS 442

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +  A N I   G  A    LQ + AL    ++ N IG+ G + +   L + A +  + L
Sbjct: 443 LLDLAKNKIGDTGASAIAEGLQGSTALTRFGMNNNQIGNVGAQAIGSALRNKADLAIVHL 502

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
            S  + D GA AIA+ L++++ L  L ++ N I  +G  ++  AL   + +  L +  N 
Sbjct: 503 GSNKIGDAGACAIADGLRSSTALLALGMHANHIGDTGAQAIGSALRNKANLSVLLMGSNK 562

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA A+A+GL+ + +L +  +H N IGD G  A+ S L + K +LA+L +  N ISA
Sbjct: 563 IGDAGACAIAEGLQTSTALTDFKMHINQIGDAGALAIESSLRN-KPQLAILHLSRNQISA 621

Query: 374 KGAFHVAEYIK-NCKSL 389
                +++ I  +C+ L
Sbjct: 622 SAVQRLSQSIPADCEFL 638


>gi|320170828|gb|EFW47727.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 789

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 220/462 (47%), Gaps = 64/462 (13%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           ++ S+D    + GD+ +  LAE+L  +     ++ ++N I   G  +    L  N  L  
Sbjct: 21  SYGSLDYENEDIGDDLVAALAEALKGHPAVTSLNLSSNEIGIYGACSIGEALHENNVLTK 80

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+  N IG  G K +   L  N  ++ L L   DL + GA+ +A  LK N+ L  L+L 
Sbjct: 81  LNMGHNQIGAPGAKAIAGGLKSNRTLQALLLEECDLGNNGAQTLASALKVNTSLTRLDLR 140

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  SG +++A +L  N+T+ SL L+GN+    G  A+A  L+ N +L  L L    I
Sbjct: 141 FNGIGDSGASAIARSLYFNNTLTSLDLSGNFFELAGVQAIAGALQANTTLSVLFLEQCRI 200

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D   +A+ S L   +G                             L +++L  N IGD 
Sbjct: 201 TDAEAQAIASALKVNRG-----------------------------LTYLDLQRNQIGDV 231

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N+T+TTI L  N I   GA AIA  LK N  +  L L  N  GA G ++
Sbjct: 232 GAQSIAEALKVNKTLTTIHLLHNQIGVLGAQAIAETLKVNKALCVLFLRENRFGAAGTQS 291

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           + + L  +  +  L L     G + A+ +A++L+ N T++ L L+ + + D         
Sbjct: 292 IIQALGTNRTLERLSLSCNHAGDAEAQAIAEVLKVNKTLTHLYLKDSLIGD--------- 342

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
                                   GA  +A++ KV +  L  ++L  NEI D GA AIA+
Sbjct: 343 -----------------------TGALSIAETLKV-SSTLRFLNLFNNEITDTGALAIAK 378

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKE 624
           ALK N+ +   +L L+ NFLTK G +AL  + +   E+ +K+
Sbjct: 379 ALKVNKSLG--TLILSKNFLTKAGITALRQSGNPSCEVDDKD 418



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/358 (33%), Positives = 173/358 (48%), Gaps = 1/358 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K   A +S+++S    G  G   + E+L  N    +++   N I A G KA  G 
Sbjct: 40  LAEALKGHPAVTSLNLSSNEIGIYGACSIGEALHENNVLTKLNMGHNQIGAPGAKAIAGG 99

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+SN  L+ L L    +G+ G + L   L  N  + RL L    + D GA AIA  L  N
Sbjct: 100 LKSNRTLQALLLEECDLGNNGAQTLASALKVNTSLTRLDLRFNGIGDSGASAIARSLYFN 159

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L+L+ N  + +G  ++A AL  N+T+  L L         A A+A  L+ N+ L 
Sbjct: 160 NTLTSLDLSGNFFELAGVQAIAGALQANTTLSVLFLEQCRITDAEAQAIASALKVNRGLT 219

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N IGD G +++   L   K  L  + + +N I   GA  +AE +K  K+L  + 
Sbjct: 220 YLDLQRNQIGDVGAQSIAEALKVNK-TLTTIHLLHNQIGVLGAQAIAETLKVNKALCVLF 278

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N  G  G + I  AL  NRT+  + L  N+     A AIA VLK N  +T L L  +
Sbjct: 279 LRENRFGAAGTQSIIQALGTNRTLERLSLSCNHAGDAEAQAIAEVLKVNKTLTHLYLKDS 338

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            IG  GA +++E LK    +  L L   +I  +GA  +A  L+ N ++  L L  N L
Sbjct: 339 LIGDTGALSIAETLKVSSTLRFLNLFNNEITDTGALAIAKALKVNKSLGTLILSKNFL 396



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 154/309 (49%), Gaps = 5/309 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K  R   ++ +   + G+ G   LA +L  N +   +    NGI  +G  A    L  N 
Sbjct: 101 KSNRTLQALLLEECDLGNNGAQTLASALKVNTSLTRLDLRFNGIGDSGASAIARSLYFNN 160

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L +L+LSGN     GV+ +   L  N  +  L L    + D  A+AIA  LK N  L  
Sbjct: 161 TLTSLDLSGNFFELAGVQAIAGALQANTTLSVLFLEQCRITDAEAQAIASALKVNRGLTY 220

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L  N I   G  S+AEAL  N T+ ++HL  N  G LGA A+A+ L+ NK+L  L L 
Sbjct: 221 LDLQRNQIGDVGAQSIAEALKVNKTLTTIHLLHNQIGVLGAQAIAETLKVNKALCVLFLR 280

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N  G  G ++++  L + +  L  L +  N      A  +AE +K  K+L   +LY+ D
Sbjct: 281 ENRFGAAGTQSIIQALGTNR-TLERLSLSCNHAGDAEAQAIAEVLKVNKTL--THLYLKD 337

Query: 399 --IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IGD GA  IA+ LK + T+  ++L  N I   GA AIA+ LK N  + +L L+ N + 
Sbjct: 338 SLIGDTGALSIAETLKVSSTLRFLNLFNNEITDTGALAIAKALKVNKSLGTLILSKNFLT 397

Query: 457 ADGAKALSE 465
             G  AL +
Sbjct: 398 KAGITALRQ 406



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 1/284 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           QTL    K   + + +D+     GD G   +A SL +N T   +  + N    AG++A  
Sbjct: 122 QTLASALKVNTSLTRLDLRFNGIGDSGASAIARSLYFNNTLTSLDLSGNFFELAGVQAIA 181

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G LQ+N  L  L L    I D   + +   L  N G+  L L    + D GA++IAE LK
Sbjct: 182 GALQANTTLSVLFLEQCRITDAEAQAIASALKVNRGLTYLDLQRNQIGDVGAQSIAEALK 241

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  + L +N I   G  ++AE L  N  +  L L  N  GA G  ++ + L  N++
Sbjct: 242 VNKTLTTIHLLHNQIGVLGAQAIAETLKVNKALCVLFLRENRFGAAGTQSIIQALGTNRT 301

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N  GD   +A+   L   K  L  L + ++ I   GA  +AE +K   +L +
Sbjct: 302 LERLSLSCNHAGDAEAQAIAEVLKVNK-TLTHLYLKDSLIGDTGALSIAETLKVSSTLRF 360

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           +NL+ N+I D GA  IA ALK N+++ T+ L  N +   G +A+
Sbjct: 361 LNLFNNEITDTGALAIAKALKVNKSLGTLILSKNFLTKAGITAL 404



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 131/251 (52%), Gaps = 27/251 (10%)

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
           C S   ++    DIGD+    +A+ALK +  +T+++L  N I   GA +I   L +N+V+
Sbjct: 19  CDSYGSLDYENEDIGDDLVAALAEALKGHPAVTSLNLSSNEIGIYGACSIGEALHENNVL 78

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T L++ +N IGA GAKA++  LK +  +  L L  C +G +GA+ +A  L+ N +++ LD
Sbjct: 79  TKLNMGHNQIGAPGAKAIAGGLKSNRTLQALLLEECDLGNNGAQTLASALKVNTSLTRLD 138

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLK------------------------HMLFYSLC 541
           LR NG+ D   S      +F++ + SL                          +LF   C
Sbjct: 139 LRFNGIGDSGASAIARSLYFNNTLTSLDLSGNFFELAGVQAIAGALQANTTLSVLFLEQC 198

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                 A+ +A + K VN  LT +DL  N+I D GA +IA+ALK N+   +T+++L +N 
Sbjct: 199 RITDAEAQAIASALK-VNRGLTYLDLQRNQIGDVGAQSIAEALKVNK--TLTTIHLLHNQ 255

Query: 602 LTKFGQSALTD 612
           +   G  A+ +
Sbjct: 256 IGVLGAQAIAE 266



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 73/146 (50%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +A   + +    FG  G   + ++LG N+T E +S + N    A  +A  
Sbjct: 262 QAIAETLKVNKALCVLFLRENRFGAAGTQSIIQALGTNRTLERLSLSCNHAGDAEAQAIA 321

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            VL+ N  L  L L  + IGD G   + + L  ++ +  L L + ++ D GA AIA+ LK
Sbjct: 322 EVLKVNKTLTHLYLKDSLIGDTGALSIAETLKVSSTLRFLNLFNNEITDTGALAIAKALK 381

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEA 297
            N  L  L L+ N +  +G T+L ++
Sbjct: 382 VNKSLGTLILSKNFLTKAGITALRQS 407


>gi|320170762|gb|EFW47661.1| hypothetical protein CAOG_05599 [Capsaspora owczarzaki ATCC 30864]
          Length = 370

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/400 (34%), Positives = 207/400 (51%), Gaps = 44/400 (11%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           I D   + + + L  N  VE+L L    + D GA+AIAE LK N  +  L L  N I  +
Sbjct: 10  IDDADAQAIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDA 69

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AE L  N+T+  L L  N  G  GA+AL+  L+ NK+L ++ L+GN +GD G +A
Sbjct: 70  GARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQA 129

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           +   L      +  L + NN +   GA  +AE ++  K L  + L  N IGD GA  +A+
Sbjct: 130 IAEMLRVNT-TVTRLSLYNNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVAE 188

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           ALK N ++  +DLG   I +  A  +A VL+ N+ +T L L    IG   A+A++E LK 
Sbjct: 189 ALKVNTSLQALDLG--KIGNAAAQTMAEVLQMNTTLTHLSLGL--IGDAEAQAIAEALKV 244

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI 529
           +  +  L L   QIG +GA+ +AD L+ N T+S L L+ N + +                
Sbjct: 245 NTTLTGLSLCCNQIGDAGAKTIADALKVNTTLSRLWLKQNQIGNA--------------- 289

Query: 530 YSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 589
                            GA+ +A++ KV N  LT + L+ NEI + GA AIA+ALK N  
Sbjct: 290 -----------------GAQAIAEALKV-NTRLTHLGLSENEIGNAGAQAIAEALKVNS- 330

Query: 590 VAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
             +T L L NN +   G  A+ +A    ++M+ K V+I++
Sbjct: 331 -TLTRLFLENNQIGDAGAQAVAEA----FKMNPKLVDIWY 365



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/335 (36%), Positives = 178/335 (53%), Gaps = 5/335 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +++     GD G   +AE+L  N T  E+    N I  AG +A    L+ N  +  L
Sbjct: 28  VEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAETLRVNTTVTDL 87

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N IGD G   L   L  N  + ++ L+   + D GA+AIAE+L+ N+ +  L L N
Sbjct: 88  GLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVTRLSLYN 147

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +  +G T++AE L  N  + SL L+ N  G  GANA+A+ L+ N SL+ L L    IG
Sbjct: 148 NKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVAEALKVNTSLQALDL--GKIG 205

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +   +  M+ +      L  L +G   I    A  +AE +K   +L  ++L  N IGD G
Sbjct: 206 NAAAQT-MAEVLQMNTTLTHLSLG--LIGDAEAQAIAEALKVNTTLTGLSLCCNQIGDAG 262

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ IADALK N T++ + L  N I + GA AIA  LK N+ +T L L+ N IG  GA+A+
Sbjct: 263 AKTIADALKVNTTLSRLWLKQNQIGNAGAQAIAEALKVNTRLTHLGLSENEIGNAGAQAI 322

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           +E LK +  +  L L   QIG +GA+ VA+  + N
Sbjct: 323 AEALKVNSTLTRLFLENNQIGDAGAQAVAEAFKMN 357



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 188/376 (50%), Gaps = 42/376 (11%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  ++ LNL  N IGD G + + + L  N  V  L+L+   + D GA+AIAE L+ N
Sbjct: 22  LKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAETLRVN 81

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +  L L  N I  +G  +L+ AL  N T+  + LNGN  G  GA A+A+ L  N ++ 
Sbjct: 82  TTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVT 141

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L+ N +GD                              GA  +AE ++  K L  + 
Sbjct: 142 RLSLYNNKLGD-----------------------------AGATTIAEMLQVNKILTSLG 172

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD GA  +A+ALK N ++  +DLG   I +  A  +A VL+ N+ +T L L   
Sbjct: 173 LDYNQIGDAGANAVAEALKVNTSLQALDLG--KIGNAAAQTMAEVLQMNTTLTHLSLGL- 229

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG   A+A++E LK +  +  L L   QIG +GA+ +AD L+ N T+S L L+ N +  
Sbjct: 230 -IGDAEAQAIAEALKVNTTLTGLSLCCNQIGDAGAKTIADALKVNTTLSRLWLKQNQI-- 286

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
               G  G      A+     +    L  N +   GA+ +A++ K VN  LT + L  N+
Sbjct: 287 ----GNAGAQAIAEALKVNTRLTHLGLSENEIGNAGAQAIAEALK-VNSTLTRLFLENNQ 341

Query: 572 IRDDGAFAIAQALKAN 587
           I D GA A+A+A K N
Sbjct: 342 IGDAGAQAVAEAFKMN 357



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/317 (36%), Positives = 166/317 (52%), Gaps = 11/317 (3%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           LN    ELR      ++    GD G   +AE+L  N T  ++    N I  AG  A    
Sbjct: 52  LNMTVTELR------LTKNQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAA 105

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L  ++L+GN +GD G + + ++L  N  V RL L +  L D GA  IAE+L+ N
Sbjct: 106 LKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVTRLSLYNNKLGDAGATTIAEMLQVN 165

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            IL  L L+ N I  +G  ++AEAL  N+++++L L G  G A  A  +A+ L+ N +L 
Sbjct: 166 KILTSLGLDYNQIGDAGANAVAEALKVNTSLQALDL-GKIGNA-AAQTMAEVLQMNTTLT 223

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
             HL    IGD   +A+   L      L  L +  N I   GA  +A+ +K   +L  + 
Sbjct: 224 --HLSLGLIGDAEAQAIAEALKVNT-TLTGLSLCCNQIGDAGAKTIADALKVNTTLSRLW 280

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IG+ GA+ IA+ALK N  +T + L  N I + GA AIA  LK NS +T L L  N
Sbjct: 281 LKQNQIGNAGAQAIAEALKVNTRLTHLGLSENEIGNAGAQAIAEALKVNSTLTRLFLENN 340

Query: 454 PIGADGAKALSEVLKFH 470
            IG  GA+A++E  K +
Sbjct: 341 QIGDAGAQAVAEAFKMN 357



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 25/186 (13%)

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           +I    A AIA  LK N  +  L+L +N IG  GA+A++E LK +  +  L+L   QIG 
Sbjct: 9   HIDDADAQAIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGD 68

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDE---------------VCSGCNGLSFFHSAIY 530
           +GA  +A+ LR N T++ L L  N + D                +    NG     +   
Sbjct: 69  AGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQ 128

Query: 531 SLKHMLFYSLCINYLQ---------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
           ++  ML  +  +  L          GA  +A+  + VN+ LTS+ L +N+I D GA A+A
Sbjct: 129 AIAEMLRVNTTVTRLSLYNNKLGDAGATTIAEMLQ-VNKILTSLGLDYNQIGDAGANAVA 187

Query: 582 QALKAN 587
           +ALK N
Sbjct: 188 EALKVN 193



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 98/221 (44%), Gaps = 24/221 (10%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS +  KL      T+ E  +  +  +S+ +     GD G   +AE+L  N + + +   
Sbjct: 143 LSLYNNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVAEALKVNTSLQALDLG 202

Query: 199 ANGITAAGI------------------------KAFDGVLQSNIALKTLNLSGNPIGDEG 234
             G  AA                          +A    L+ N  L  L+L  N IGD G
Sbjct: 203 KIGNAAAQTMAEVLQMNTTLTHLSLGLIGDAEAQAIAEALKVNTTLTGLSLCCNQIGDAG 262

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            K + D L  N  + RL L    + + GA+AIAE LK N+ L  L L+ N I  +G  ++
Sbjct: 263 AKTIADALKVNTTLSRLWLKQNQIGNAGAQAIAEALKVNTRLTHLGLSENEIGNAGAQAI 322

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           AEAL  NST+  L L  N  G  GA A+A+  + N  L ++
Sbjct: 323 AEALKVNSTLTRLFLENNQIGDAGAQAVAEAFKMNPKLVDI 363



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           Y  I    A+A++E LK + N+  L LGW QIG +GA  +A+ L+ N T++ L L  N +
Sbjct: 7   YKHIDDADAQAIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQI 66

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            D   +G   ++       ++  +  +   I    GA  L+ + K VN+ L  IDL  N+
Sbjct: 67  GD---AGARAIAETLRVNTTVTDLGLWKNQIGD-AGAHALSAALK-VNKTLIKIDLNGNQ 121

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           + D GA AIA+ L+ N    VT L+L NN L   G + + +
Sbjct: 122 VGDAGAQAIAEMLRVN--TTVTRLSLYNNKLGDAGATTIAE 160


>gi|452822160|gb|EME29182.1| FBox-LRR protein [Galdieria sulphuraria]
          Length = 1076

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 201/388 (51%), Gaps = 11/388 (2%)

Query: 120 PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSV---DMSGRNFGD 176
           P+    E  ++S   GT L        F   K  L    K L+A S++   D+   N   
Sbjct: 386 PNNDFKEYWSFSKDFGTRLC-------FYPDKVKLEFACKALQANSTLEILDIDSCNMNS 438

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           +    L+E+L  N T + +    N I + G +    VL+ N  L  L++ GN IG EG +
Sbjct: 439 DDAKKLSEALKRNSTLDNLCIGINKINSEGARYIADVLKMNSTLTKLSIYGNNIGSEGAR 498

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            L + L  N+ ++ L +   ++  EG K I+  L +NS L  L +  N ID  G   L+E
Sbjct: 499 YLSEALKVNSTLKMLCMGRNNIGSEGTKYISNALMHNSTLTELCIYGNNIDSQGAKYLSE 558

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           AL  NS +++  L  N  G+ GA  L+K LE N +L EL+++ N IG EG + L  G   
Sbjct: 559 ALKVNSGLKTFRLGRNSIGSEGAMVLSKALERNSTLTELYIYANKIGPEGAKHLF-GAME 617

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R  KL  L IG N+I   GA  ++E ++   SL  + LY N+IG +G + +++AL+ N  
Sbjct: 618 RHSKLTTLCIGINNIGPDGAKALSEALQRNSSLETLQLYANEIGSQGMKYLSEALEINSA 677

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +TT  +G N+I ++GA  ++  LK NS +  L +  N I A GA+ LS++L+ + ++  +
Sbjct: 678 LTTFLIGCNDIGNEGAGHLSEALKTNSTLKVLYIYGNNIDATGARYLSDMLRRNLSLIKM 737

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISIL 504
            +    IG+ G   + + L+ N T+  L
Sbjct: 738 HIYGNSIGSEGFNALVEGLKENYTMKEL 765



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 27/370 (7%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
            T +L    +QT N   KE  +FS      ++FG    F+  +         ++ FA   
Sbjct: 374 ITSELCYHLQQTPNNDFKEYWSFS------KDFGTRLCFYPDKV--------KLEFACKA 419

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
                       LQ+N  L+ L++    +  +  K L + L  N+ ++ L +    +  E
Sbjct: 420 ------------LQANSTLEILDIDSCNMNSDDAKKLSEALKRNSTLDNLCIGINKINSE 467

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+ IA++LK NS L  L +  N I   G   L+EAL  NST++ L +  N  G+ G   
Sbjct: 468 GARYIADVLKMNSTLTKLSIYGNNIGSEGARYLSEALKVNSTLKMLCMGRNNIGSEGTKY 527

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  N +L EL ++GN+I  +G + L   L    G L    +G NSI ++GA  +++
Sbjct: 528 ISNALMHNSTLTELCIYGNNIDSQGAKYLSEALKVNSG-LKTFRLGRNSIGSEGAMVLSK 586

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++   +L  + +Y N IG EGA+ +  A++++  +TT+ +G NNI   GA A++  L+ 
Sbjct: 587 ALERNSTLTELYIYANKIGPEGAKHLFGAMERHSKLTTLCIGINNIGPDGAKALSEALQR 646

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           NS + +L L  N IG+ G K LSE L+ +  + T  +G   IG  GA  +++ L+ N+T+
Sbjct: 647 NSSLETLQLYANEIGSQGMKYLSEALEINSALTTFLIGCNDIGNEGAGHLSEALKTNSTL 706

Query: 502 SILDLRANGL 511
            +L +  N +
Sbjct: 707 KVLYIYGNNI 716



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 154/295 (52%), Gaps = 16/295 (5%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+ N +L  L +   ++  +  + L   L  R   L  L IG N I+++GA ++A+ 
Sbjct: 417 CKALQANSTLEILDIDSCNMNSDDAKKLSEALK-RNSTLDNLCIGINKINSEGARYIADV 475

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K   +L  +++Y N+IG EGA  +++ALK N T+  + +G NNI S+G   I+  L  N
Sbjct: 476 LKMNSTLTKLSIYGNNIGSEGARYLSEALKVNSTLKMLCMGRNNIGSEGTKYISNALMHN 535

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L +  N I + GAK LSE LK +  + T +LG   IG+ GA  ++  L  N+T++
Sbjct: 536 STLTELCIYGNNIDSQGAKYLSEALKVNSGLKTFRLGRNSIGSEGAMVLSKALERNSTLT 595

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY----LQGAKCLAQSFKVV 558
            L + AN +      G  G      A+   +H    +LCI        GAK L+++ +  
Sbjct: 596 ELYIYANKI------GPEGAKHLFGAME--RHSKLTTLCIGINNIGPDGAKALSEALQ-R 646

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N +L ++ L  NEI   G   +++AL+ N   A+T+  +  N +   G   L++A
Sbjct: 647 NSSLETLQLYANEIGSQGMKYLSEALEINS--ALTTFLIGCNDIGNEGAGHLSEA 699



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 4/222 (1%)

Query: 171 GRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           GRN  G EG   L+++L  N T  E+   AN I   G K   G ++ +  L TL +  N 
Sbjct: 572 GRNSIGSEGAMVLSKALERNSTLTELYIYANKIGPEGAKHLFGAMERHSKLTTLCIGINN 631

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG +G K L + L  N+ +E LQL + ++  +G K ++E L+ NS L    +  N I   
Sbjct: 632 IGPDGAKALSEALQRNSSLETLQLYANEIGSQGMKYLSEALEINSALTTFLIGCNDIGNE 691

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   L+EAL  NST++ L++ GN   A GA  L+  L  N SL ++H++GNSIG EG  A
Sbjct: 692 GAGHLSEALKTNSTLKVLYIYGNNIDATGARYLSDMLRRNLSLIKMHIYGNSIGSEGFNA 751

Query: 350 LMSGLSSRKG-KLAVLDIGNNSISAKGAFHVAEYIK--NCKS 388
           L+ GL      K   ++I ++SI ++    + E +   NC S
Sbjct: 752 LVEGLKENYTMKELYINIKDDSIGSRETSLIRELLHRNNCLS 793



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 26/246 (10%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G EG   L  ++  +     +    N I   G KA    LQ N +L+TL L  N IG +
Sbjct: 604 IGPEGAKHLFGAMERHSKLTTLCIGINNIGPDGAKALSEALQRNSSLETLQLYANEIGSQ 663

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G+K L + L  N+ +    +   D+ +EGA  ++E LK NS L+VL +  N ID +G   
Sbjct: 664 GMKYLSEALEINSALTTFLIGCNDIGNEGAGHLSEALKTNSTLKVLYIYGNNIDATGARY 723

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH--GNSIGDEG---IR 348
           L++ L  N ++  +H+ GN  G+ G NAL +GL+ N +++EL+++   +SIG      IR
Sbjct: 724 LSDMLRRNLSLIKMHIYGNSIGSEGFNALVEGLKENYTMKELYINIKDDSIGSRETSLIR 783

Query: 349 ALM---------------------SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            L+                       +  R+ KL +    ++  + K AF +  Y+++ +
Sbjct: 784 ELLHRNNCLSDEVDSPISFTQEEEQMIMERRKKLDLPTQQDHDAACKAAFLLISYLQHRR 843

Query: 388 SLLWIN 393
            L  I+
Sbjct: 844 KLCLID 849



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 2/116 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A ++  +   + G+EG   L+E+L  N T + +    N I A G +    +L+ N++L  
Sbjct: 677 ALTTFLIGCNDIGNEGAGHLSEALKTNSTLKVLYIYGNNIDATGARYLSDMLRRNLSLIK 736

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD--LRDEGAKAIAELLKNNSIL 276
           +++ GN IG EG   L + L +N  ++ L ++  D  +       I ELL  N+ L
Sbjct: 737 MHIYGNSIGSEGFNALVEGLKENYTMKELYINIKDDSIGSRETSLIRELLHRNNCL 792


>gi|320169066|gb|EFW45965.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 529

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 158/452 (34%), Positives = 229/452 (50%), Gaps = 38/452 (8%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +A  S +MS    GD     +A +L  N T  E++   N I AAG +A    L++N ALK
Sbjct: 25  KASGSHNMSSAQIGDADAQAIAAALKVNTTLTEINLGGNQIGAAGAQAIAEALKANRALK 84

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IGD G + + + L  N  +  + LS   +   GA+AIAE LK  S  RV  L
Sbjct: 85  KLALGRNQIGDAGAEAIAEALKVNTTLTNIYLSKNHIGQVGAQAIAEALKKGSP-RV-SL 142

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I  +G  ++A AL  N+T+  + L  N     GA A+A+ L+ N +L  L L GN 
Sbjct: 143 SENQIGDAGALAIAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALKVNATLTNLFLGGNP 202

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            GD G +A+   LS+   KL  L++  + I   GA  +A  ++   +++ + L  N IGD
Sbjct: 203 FGDAGAQAVAEALSANT-KLICLNLPQSQIGEAGAHAIASALEVNTTVMLLGLNENQIGD 261

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ IA ALK N T+T + LG N I   GA AIA  LK N ++ S+ L  N IG  GA+
Sbjct: 262 LGAQAIAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALKVNQIVISIGLDENQIGDAGAE 321

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           A++E +  +  +  L LG  QIG +GA+ +A   + N T++ L L  N + D        
Sbjct: 322 AIAEAITVNKTVKKLGLGKNQIGDAGAQAIAVAFQVNQTVTALGLHQNRIGDV------- 374

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
                                    GA+ +A++ K VN+ +T + L  N++ D GA AIA
Sbjct: 375 -------------------------GAQAIAEALK-VNKTVTELGLYENQLGDAGAEAIA 408

Query: 582 QALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           QALK N  VA   L L  N +   G  A+ +A
Sbjct: 409 QALKVNTTVA--ELGLDGNQIGDVGAQAIVEA 438



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 150/455 (32%), Positives = 222/455 (48%), Gaps = 37/455 (8%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K  RA   + +     GD G   +AE+L  N T   +  + N I   G +A    L+
Sbjct: 75  EALKANRALKKLALGRNQIGDAGAEAIAEALKVNTTLTNIYLSKNHIGQVGAQAIAEALK 134

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
                  ++LS N IGD G   +   L  N  V  + L    +   GA+AIAE LK N+ 
Sbjct: 135 K--GSPRVSLSENQIGDAGALAIAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALKVNAT 192

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L L  N    +G  ++AEAL  N+ +  L+L  +  G  GA+A+A  LE N ++  L
Sbjct: 193 LTNLFLGGNPFGDAGAQAVAEALSANTKLICLNLPQSQIGEAGAHAIASALEVNTTVMLL 252

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L+ N IGD G +A+ + L      +  + +G N I   GA  +AE +K  + ++ I L 
Sbjct: 253 GLNENQIGDLGAQAIAAALKVNT-TVTEVGLGMNQIDVAGAQAIAEALKVNQIVISIGLD 311

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GAE IA+A+  N+T+  + LG N I   GA AIA   + N  +T+L L  N I
Sbjct: 312 ENQIGDAGAEAIAEAITVNKTVKKLGLGKNQIGDAGAQAIAVAFQVNQTVTALGLHQNRI 371

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           G  GA+A++E LK +  +  L L   Q+G +GAE +A  L+ N T++ L L  N + D  
Sbjct: 372 GDVGAQAIAEALKVNKTVTELGLYENQLGDAGAEAIAQALKVNTTVAELGLDGNQIGDV- 430

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
                                          GA+ + ++ + VN+ +  + L  N+I D 
Sbjct: 431 -------------------------------GAQAIVEALR-VNKTVKMLYLEGNQIGDA 458

Query: 576 GAFAIAQALKANEDVAVTSLNLAN-NFLTKFGQSA 609
            A  IA ALK N+  A T  +L+N NFLT+ G +A
Sbjct: 459 KALEIAMALKTNKTPADTHNSLSNPNFLTRAGTAA 493



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 149/321 (46%), Gaps = 31/321 (9%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +++ + G  FGD G   +AE+L  N     ++   + I  AG  A  
Sbjct: 181 QAIAEALKVNATLTNLFLGGNPFGDAGAQAVAEALSANTKLICLNLPQSQIGEAGAHAIA 240

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  +  L L+ N IGD G + +   L  N  V  + L    +   GA+AIAE LK
Sbjct: 241 SALEVNTTVMLLGLNENQIGDLGAQAIAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALK 300

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N I+  + L+ N I  +G  ++AEA+  N T++ L L  N  G  GA A+A   + N++
Sbjct: 301 VNQIVISIGLDENQIGDAGAEAIAEAITVNKTVKKLGLGKNQIGDAGAQAIAVAFQVNQT 360

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +  L LH N IGD G +A                             +AE +K  K++  
Sbjct: 361 VTALGLHQNRIGDVGAQA-----------------------------IAEALKVNKTVTE 391

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + LY N +GD GAE IA ALK N T+  + L GN I   GA AI   L+ N  +  L L 
Sbjct: 392 LGLYENQLGDAGAEAIAQALKVNTTVAELGLDGNQIGDVGAQAIVEALRVNKTVKMLYLE 451

Query: 452 YNPIGADGAKALSEVLKFHGN 472
            N IG   AKAL   +    N
Sbjct: 452 GNQIG--DAKALEIAMALKTN 470



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 91/185 (49%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +   S+ +     GD G   +AE++  N+T +++    N I  AG +A  
Sbjct: 293 QAIAEALKVNQIVISIGLDENQIGDAGAEAIAEAITVNKTVKKLGLGKNQIGDAGAQAIA 352

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              Q N  +  L L  N IGD G + + + L  N  V  L L    L D GA+AIA+ LK
Sbjct: 353 VAFQVNQTVTALGLHQNRIGDVGAQAIAEALKVNKTVTELGLYENQLGDAGAEAIAQALK 412

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ +  L L+ N I   G  ++ EAL  N T++ L+L GN  G   A  +A  L+ NK+
Sbjct: 413 VNTTVAELGLDGNQIGDVGAQAIVEALRVNKTVKMLYLEGNQIGDAKALEIAMALKTNKT 472

Query: 332 LRELH 336
             + H
Sbjct: 473 PADTH 477


>gi|320165432|gb|EFW42331.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 446

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/295 (37%), Positives = 158/295 (53%), Gaps = 1/295 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GD+    +AE+L  N+T   +   A  I   G +A    L+ N  LK L+L  N IGD G
Sbjct: 27  GDDEAKAIAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNRTLKELHLHTNQIGDAG 86

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            + + + L  N  + RL L    +   GA+AIAE LK N+ L  L+L  + I  +G  ++
Sbjct: 87  AQAIAEALEVNTALRRLDLGCNQIGKAGARAIAEALKANTTLTSLDLWESQIGDAGVQAI 146

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
            EAL EN+T+  L L+ +  G  GA+A+A+ L+ NK+L  L L    IGD G  A+   L
Sbjct: 147 FEALKENATVTKLGLSDSQIGDAGAHAIAEALKVNKTLSCLKLCACQIGDAGAHAIAEAL 206

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
              K  +  L +  N I   GA  +AE ++   +L  + L+MN IGD GA+ IA+ALK N
Sbjct: 207 RVNK-TVTTLYLHENQIGDAGARAIAEALRVNTTLTQLYLHMNQIGDVGAQAIAEALKLN 265

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
             +  + L GN I   G  AIA  LK N+ +T LDL YN IG  G +A  E+ + 
Sbjct: 266 TMVNELFLSGNQIGDIGVHAIAEALKVNTTVTELDLRYNCIGNVGLQAFDEMCQV 320



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 167/320 (52%), Gaps = 36/320 (11%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL  N T+  L L     G +GA A+A+ L+ N++L+ELHLH N IGD G +A   
Sbjct: 33  AIAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNRTLKELHLHTNQIGDAGAQA--- 89

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                                     +AE ++   +L  ++L  N IG  GA  IA+ALK
Sbjct: 90  --------------------------IAEALEVNTALRRLDLGCNQIGKAGARAIAEALK 123

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+T++DL  + I   G  AI   LK+N+ +T L L+ + IG  GA A++E LK +  
Sbjct: 124 ANTTLTSLDLWESQIGDAGVQAIFEALKENATVTKLGLSDSQIGDAGAHAIAEALKVNKT 183

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           ++ LKL  CQIG +GA  +A+ LR N T++ L L  N + D   +G   ++       +L
Sbjct: 184 LSCLKLCACQIGDAGAHAIAEALRVNKTVTTLYLHENQIGD---AGARAIAEALRVNTTL 240

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
             +  +   I  + GA+ +A++ K +N  +  + L+ N+I D G  AIA+ALK N    V
Sbjct: 241 TQLYLHMNQIGDV-GAQAIAEALK-LNTMVNELFLSGNQIGDIGVHAIAEALKVN--TTV 296

Query: 593 TSLNLANNFLTKFGQSALTD 612
           T L+L  N +   G  A  +
Sbjct: 297 TELDLRYNCIGNVGLQAFDE 316



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 147/307 (47%), Gaps = 31/307 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  R    + +     GD G   +AE+L  N     +    N I  AG +A  
Sbjct: 60  QAIAEALKVNRTLKELHLHTNQIGDAGAQAIAEALEVNTALRRLDLGCNQIGKAGARAIA 119

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L++N  L +L+L  + IGD GV+ + + L +NA V +L LS   + D GA AIAE LK
Sbjct: 120 EALKANTTLTSLDLWESQIGDAGVQAIFEALKENATVTKLGLSDSQIGDAGAHAIAEALK 179

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L    I  +G  ++AEAL  N T+ +L+L+ N  G  GA A+A+ L  N +
Sbjct: 180 VNKTLSCLKLCACQIGDAGAHAIAEALRVNKTVTTLYLHENQIGDAGARAIAEALRVNTT 239

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L +L+LH N IGD G +A+   L         L+   N +   G                
Sbjct: 240 LTQLYLHMNQIGDVGAQAIAEALK--------LNTMVNELFLSG---------------- 275

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS--LD 449
                N IGD G   IA+ALK N T+T +DL  N I + G  A   + + N  +++  +D
Sbjct: 276 -----NQIGDIGVHAIAEALKVNTTVTELDLRYNCIGNVGLQAFDEMCQVNRTLSNFWID 330

Query: 450 LAYNPIG 456
              NP+ 
Sbjct: 331 GQINPLA 337


>gi|326433023|gb|EGD78593.1| hypothetical protein PTSG_09285 [Salpingoeca sp. ATCC 50818]
          Length = 1250

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/247 (42%), Positives = 147/247 (59%), Gaps = 1/247 (0%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A+A+AE LK+N+ L+ L L  N I   G  +LAE L  N+T+  L L  N  G  GA AL
Sbjct: 53  ARAVAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAAL 112

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L+ N +L EL L+ NSIGDEG  AL   L      L  L + NNSI  +GA  +AE 
Sbjct: 113 AEMLKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTA-LETLYLDNNSIGDQGAVVLAEM 171

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+  ++  +NL  N IGDEGA  +A+ LK N  +  + L GN+I ++GA A+A +LK N
Sbjct: 172 LKHNTTMTGLNLGANSIGDEGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHN 231

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +  L L  N +G  GA AL+E+LK +  +  L LG   IG  GA  +A+ML++N T++
Sbjct: 232 TTLERLFLERNRVGDKGAVALAEMLKHNTTLTGLNLGANSIGDEGAVALAEMLKHNTTLT 291

Query: 503 ILDLRAN 509
            L +  N
Sbjct: 292 WLGIGRN 298



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/259 (39%), Positives = 146/259 (56%), Gaps = 1/259 (0%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +AE+L  N   + +    N I   G  A   +L+ N  L+ L+L  N IGDEG   L ++
Sbjct: 56  VAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEM 115

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +E L L +  + DEGA A+AE+LK+N+ L  L L+NN I   G   LAE L  N
Sbjct: 116 LKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHN 175

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L+L  N  G  GA ALA+ L+ N +L+EL+L GNSIG++G  AL   L      L
Sbjct: 176 TTMTGLNLGANSIGDEGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNT-TL 234

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +  N +  KGA  +AE +K+  +L  +NL  N IGDEGA  +A+ LK N T+T + 
Sbjct: 235 ERLFLERNRVGDKGAVALAEMLKHNTTLTGLNLGANSIGDEGAVALAEMLKHNTTLTWLG 294

Query: 422 LGGNNIHSKGASAIARVLK 440
           +G N I  +G   + + L+
Sbjct: 295 IGRNRITERGMVNVLKQLQ 313



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 161/299 (53%), Gaps = 7/299 (2%)

Query: 205 AGIKAFDGV------LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
           A  K  DGV      + +N      NL G  +G    + + + L DN  ++RL L    +
Sbjct: 17  AQTKLMDGVKHKIRAIANNTCGDYENLGGYGLGAIEARAVAEALKDNTCLKRLYLWGNSI 76

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
             EGA A+AE+LK+N+ L  L L  N I   G  +LAE L  N+T+  L L  N  G  G
Sbjct: 77  GPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEG 136

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A ALA+ L+ N +L  L+L  NSIGD+G   L   L      +  L++G NSI  +GA  
Sbjct: 137 AVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHNT-TMTGLNLGANSIGDEGAVA 195

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K+  +L  + L  N IG++GA  +A+ LK N T+  + L  N +  KGA A+A +
Sbjct: 196 LAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAVALAEM 255

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           LK N+ +T L+L  N IG +GA AL+E+LK +  +  L +G  +I   G   V   L++
Sbjct: 256 LKHNTTLTGLNLGANSIGDEGAVALAEMLKHNTTLTWLGIGRNRITERGMVNVLKQLQH 314



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/222 (42%), Positives = 137/222 (61%), Gaps = 1/222 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL +N+ ++ L+L GN  G  GA ALA+ L+ N +L  L L  NSIGDEG  AL  
Sbjct: 55  AVAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAE 114

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  L + NNSI  +GA  +AE +K+  +L  + L  N IGD+GA  +A+ LK
Sbjct: 115 MLKHNT-TLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLK 173

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+T ++LG N+I  +GA A+A +LK N+ +  L L  N IG  GA AL+E+LK +  
Sbjct: 174 HNTTMTGLNLGANSIGDEGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTT 233

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +  L L   ++G  GA  +A+ML++N T++ L+L AN + DE
Sbjct: 234 LERLFLERNRVGDKGAVALAEMLKHNTTLTGLNLGANSIGDE 275



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 143/271 (52%), Gaps = 3/271 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G + G EG   LAE L +N T E +S   N I   G  A   +L+ N  L+ L+L  N
Sbjct: 71  LWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTTLEELSLYNN 130

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGDEG   L ++L  N  +E L L +  + D+GA  +AE+LK+N+ +  L L  N I  
Sbjct: 131 SIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGANSIGD 190

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  +LAE L  N+ ++ L+L GN  G  GA ALA+ L+ N +L  L L  N +GD+G  
Sbjct: 191 EGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAV 250

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L      L  L++G NSI  +GA  +AE +K+  +L W+ +  N I + G   + 
Sbjct: 251 ALAEMLKHNT-TLTGLNLGANSIGDEGAVALAEMLKHNTTLTWLGIGRNRITERGMVNVL 309

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVL 439
             L+       I L  + +  K ++A+AR L
Sbjct: 310 KQLQHIDAKAKIRLFEDKL--KSSTAVARAL 338



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 138/268 (51%), Gaps = 3/268 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L E  K       + +   + GDEG   LAE L +N T EE+S   N I   G  
Sbjct: 79  EGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEGAV 138

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   +L+ N AL+TL L  N IGD+G   L ++L  N  +  L L +  + DEGA A+AE
Sbjct: 139 ALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGANSIGDEGAVALAE 198

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +LK+N+ L+ L L  N I   G  +LAE L  N+T+  L L  N  G  GA ALA+ L+ 
Sbjct: 199 MLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAVALAEMLKH 258

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L  L+L  NSIGDEG  AL   L      L  L IG N I+ +G  +V + +++  +
Sbjct: 259 NTTLTGLNLGANSIGDEGAVALAEMLKHNT-TLTWLGIGRNRITERGMVNVLKQLQHIDA 317

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRT 416
              I L+ + +    A  +A AL   RT
Sbjct: 318 KAKIRLFEDKLKSSTA--VARALATLRT 343



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 133/248 (53%), Gaps = 7/248 (2%)

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           ++G   + A  A  VAE +K+   L  + L+ N IG EGA  +A+ LK N T+  + L  
Sbjct: 42  NLGGYGLGAIEARAVAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRW 101

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+I  +GA+A+A +LK N+ +  L L  N IG +GA AL+E+LK +  + TL L    IG
Sbjct: 102 NSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIG 161

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
             GA  +A+ML++N T++ L+L AN + DE   G   L+       +LK +      I  
Sbjct: 162 DQGAVVLAEMLKHNTTMTGLNLGANSIGDE---GAVALAEMLKHNTALKELYLEGNSIGN 218

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            QGA  LA+  K  N  L  + L  N + D GA A+A+ LK N    +T LNL  N +  
Sbjct: 219 -QGAVALAEMLK-HNTTLERLFLERNRVGDKGAVALAEMLKHN--TTLTGLNLGANSIGD 274

Query: 605 FGQSALTD 612
            G  AL +
Sbjct: 275 EGAVALAE 282


>gi|320166401|gb|EFW43300.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 575

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 212/445 (47%), Gaps = 36/445 (8%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M+    GD G   +AE L  +    +     N I  AG +A    L++   L  LNL  N
Sbjct: 80  MTSNMIGDAGARAIAEGLQASPELADFRMDTNQIGDAGAQAIGVALRNKANLSILNLDEN 139

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  +  +  L++SS  + D GA+AI   L N + L +L+L+ N I  
Sbjct: 140 KIGDAGARAIAEGLQTSTALTELRMSSNQIGDAGAQAIGAALGNKANLSMLDLHENKIGD 199

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++AE L  ++ +  L ++ N  G  GA A+   L+   +L  L+L  N IGD G R
Sbjct: 200 AGARAIAEGLRTSTALAKLGMHANQIGDAGAQAIGSALQNKANLSMLYLSSNKIGDAGAR 259

Query: 349 ALMSGLSS---------------------------RKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  GL +                            K  L+VL +  N I   GA  +AE
Sbjct: 260 SIAEGLQTSIELIDLRMDTNQIGDTGAQAIGSALRNKPDLSVLYLDENKIGDAGARAIAE 319

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++    L  + +  N IGD GA+ I  AL+    ++ + L  NNI   GASA+A  L+ 
Sbjct: 320 GLQTSAELTDLRMQTNQIGDAGAQAIGLALRNKANLSMLYLEENNIGDAGASAVAEGLQT 379

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           ++ +T L +  N  G  GAKA+   L+   N++ L L   +IG SGA  +A+ L+ +  +
Sbjct: 380 STALTELRMHTNQFGDTGAKAIGSALRNKPNLSVLGLNSNKIGDSGARAIAEGLKTSTAL 439

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVN 559
           ++LD+  N + D       G     SA+ +   +    L  N +   GA+ +A+  +  +
Sbjct: 440 AVLDMFNNQIGDA------GAQAIGSALRNKAGLAMLYLSSNQIGDSGARAIAEGIQ-GS 492

Query: 560 EALTSIDLAFNEIRDDGAFAIAQAL 584
             LT++ +  N+I D GA AI  AL
Sbjct: 493 AVLTALRMHDNQIGDAGAQAIGFAL 517



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 231/470 (49%), Gaps = 12/470 (2%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E    + +  KE      +D+     GD G   +  +L        +   +N I  
Sbjct: 28  KITDEDALVIAKGLKENSKLQLLDLEDNEIGDAGARAIGLALRTKSNLCNLYMTSNMIGD 87

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    LQ++  L    +  N IGD G + +   L + A +  L L    + D GA+
Sbjct: 88  AGARAIAEGLQASPELADFRMDTNQIGDAGAQAIGVALRNKANLSILNLDENKIGDAGAR 147

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE L+ ++ L  L +++N I  +G  ++  AL   + +  L L+ N  G  GA A+A+
Sbjct: 148 AIAEGLQTSTALTELRMSSNQIGDAGAQAIGAALGNKANLSMLDLHENKIGDAGARAIAE 207

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GL  + +L +L +H N IGD G +A+ S L + K  L++L + +N I   GA  +AE ++
Sbjct: 208 GLRTSTALAKLGMHANQIGDAGAQAIGSALQN-KANLSMLYLSSNKIGDAGARSIAEGLQ 266

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
               L+ + +  N IGD GA+ I  AL+    ++ + L  N I   GA AIA  L+ ++ 
Sbjct: 267 TSIELIDLRMDTNQIGDTGAQAIGSALRNKPDLSVLYLDENKIGDAGARAIAEGLQTSAE 326

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +T L +  N IG  GA+A+   L+   N++ L L    IG +GA  VA+ L+ +  ++ L
Sbjct: 327 LTDLRMQTNQIGDAGAQAIGLALRNKANLSMLYLEENNIGDAGASAVAEGLQTSTALTEL 386

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEAL 562
            +  N   D       G     SA+ +  ++    L  N +   GA+ +A+  K  + AL
Sbjct: 387 RMHTNQFGD------TGAKAIGSALRNKPNLSVLGLNSNKIGDSGARAIAEGLK-TSTAL 439

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +D+  N+I D GA AI  AL+    +A+  L L++N +   G  A+ +
Sbjct: 440 AVLDMFNNQIGDAGAQAIGSALRNKAGLAM--LYLSSNQIGDSGARAIAE 487



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 194/384 (50%), Gaps = 9/384 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + + MS    GD G   +  +LG       +    N I  AG +A    L+++ AL  
Sbjct: 158 ALTELRMSSNQIGDAGAQAIGAALGNKANLSMLDLHENKIGDAGARAIAEGLRTSTALAK 217

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L +  N IGD G + +   L + A +  L LSS  + D GA++IAE L+ +  L  L ++
Sbjct: 218 LGMHANQIGDAGAQAIGSALQNKANLSMLYLSSNKIGDAGARSIAEGLQTSIELIDLRMD 277

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++  AL     +  L+L+ N  G  GA A+A+GL+ +  L +L +  N I
Sbjct: 278 TNQIGDTGAQAIGSALRNKPDLSVLYLDENKIGDAGARAIAEGLQTSAELTDLRMQTNQI 337

Query: 343 GDEGIRALMSGLSSR-KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           GD G +A+  GL+ R K  L++L +  N+I   GA  VAE ++   +L  + ++ N  GD
Sbjct: 338 GDAGAQAI--GLALRNKANLSMLYLEENNIGDAGASAVAEGLQTSTALTELRMHTNQFGD 395

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ I  AL+    ++ + L  N I   GA AIA  LK ++ +  LD+  N IG  GA+
Sbjct: 396 TGAKAIGSALRNKPNLSVLGLNSNKIGDSGARAIAEGLKTSTALAVLDMFNNQIGDAGAQ 455

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           A+   L+    +  L L   QIG SGA  +A+ ++ +  ++ L +  N + D   +G   
Sbjct: 456 AIGSALRNKAGLAMLYLSSNQIGDSGARAIAEGIQGSAVLTALRMHDNQIGD---AGAQA 512

Query: 522 LSFFHSAIYSLKHMLFYSLCINYL 545
           + F   A+++   +   SL  N +
Sbjct: 513 IGF---ALWNKAELSKLSLSQNQI 533



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 171/353 (48%), Gaps = 1/353 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S +D+     GD G   +AE L  +    ++   AN I  AG +A    LQ+   L  L
Sbjct: 187 LSMLDLHENKIGDAGARAIAEGLRTSTALAKLGMHANQIGDAGAQAIGSALQNKANLSML 246

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            LS N IGD G + + + L  +  +  L++ +  + D GA+AI   L+N   L VL L+ 
Sbjct: 247 YLSSNKIGDAGARSIAEGLQTSIELIDLRMDTNQIGDTGAQAIGSALRNKPDLSVLYLDE 306

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  ++AE L  ++ +  L +  N  G  GA A+   L    +L  L+L  N+IG
Sbjct: 307 NKIGDAGARAIAEGLQTSAELTDLRMQTNQIGDAGAQAIGLALRNKANLSMLYLEENNIG 366

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G  A+  GL +    L  L +  N     GA  +   ++N  +L  + L  N IGD G
Sbjct: 367 DAGASAVAEGLQTSTA-LTELRMHTNQFGDTGAKAIGSALRNKPNLSVLGLNSNKIGDSG 425

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A  IA+ LK +  +  +D+  N I   GA AI   L++ + +  L L+ N IG  GA+A+
Sbjct: 426 ARAIAEGLKTSTALAVLDMFNNQIGDAGAQAIGSALRNKAGLAMLYLSSNQIGDSGARAI 485

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           +E ++    +  L++   QIG +GA+ +   L     +S L L  N +   V 
Sbjct: 486 AEGIQGSAVLTALRMHDNQIGDAGAQAIGFALWNKAELSKLSLSQNQISPSVV 538


>gi|281203588|gb|EFA77785.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
           PN500]
          Length = 602

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 175/349 (50%), Gaps = 1/349 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + +++     GD GL  L ++L YN +   +  +   +TA   +    +L  N  L+ 
Sbjct: 224 AITHINLFSNQIGDLGLLKLVQALHYNSSVTFLGLSYCNLTARSGEPLANLLAKNTTLRE 283

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS N +G  G       L  N  +  L LS  +L D+G K IA  L +N  L  L L 
Sbjct: 284 LILSYNALGSSGAVSFAAGLAKNKSLRSLSLSHNELGDDGTKEIALSLASNQSLSELNLR 343

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G   ++ +L  N +I  + L GN  G  GA  +   L  N SL+ ++L  N I
Sbjct: 344 CNSISSEGSNYISTSLQINKSIVEIDLWGNNIGDYGATKIGVALSLNHSLKSINLTRNCI 403

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             +GI ++ S L S   K+  +D+  N++ A GA  +A+ I+   S+  + L  N     
Sbjct: 404 -QQGIGSIASALCSASSKITTIDLSANALGAIGAIEIAKIIRATTSIESMTLSSNKFESN 462

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G + IA A+  N++I  ++L  N I  +GA  +A  +K NS I   DLA N +G +G KA
Sbjct: 463 GIQHIAQAISNNKSIRRLNLATNEIGVEGARYLAESIKLNSTIVYFDLAMNQLGNEGTKA 522

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           ++E L+++ +I T+ L   QI   G + +  +L  N TIS+++L  N L
Sbjct: 523 ITEALEYNKSIKTIVLSHNQIDIEGVQSILTLLNSNRTISVINLEGNHL 571



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 187/385 (48%), Gaps = 38/385 (9%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A+  +NL  N IGD G+  L   L  N+ V  L LS  +L     + +A LL  N+ LR 
Sbjct: 224 AITHINLFSNQIGDLGLLKLVQALHYNSSVTFLGLSYCNLTARSGEPLANLLAKNTTLRE 283

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L+ N +  SG  S A  L +N ++RSL L+ N  G  G   +A  L  N+SL EL+L 
Sbjct: 284 LILSYNALGSSGAVSFAAGLAKNKSLRSLSLSHNELGDDGTKEIALSLASNQSLSELNLR 343

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NSI  EG   + + L   K  +  +D+  N+I   GA  +   +    SL  INL  N 
Sbjct: 344 CNSISSEGSNYISTSLQINKS-IVEIDLWGNNIGDYGATKIGVALSLNHSLKSINLTRNC 402

Query: 399 IGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           I  +G   IA AL   +  ITTIDL  N + + GA  IA++++  + I S+ L+ N   +
Sbjct: 403 I-QQGIGSIASALCSASSKITTIDLSANALGAIGAIEIAKIIRATTSIESMTLSSNKFES 461

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
           +G + +++ +  + +I  L L   +IG  GA ++A+ ++ N+TI   DL  N L +E   
Sbjct: 462 NGIQHIAQAISNNKSIRRLNLATNEIGVEGARYLAESIKLNSTIVYFDLAMNQLGNE--- 518

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
                                        G K + ++ +  N+++ +I L+ N+I  +G 
Sbjct: 519 -----------------------------GTKAITEALE-YNKSIKTIVLSHNQIDIEGV 548

Query: 578 FAIAQALKANEDVAVTSLNLANNFL 602
            +I   L +N  ++V  +NL  N L
Sbjct: 549 QSILTLLNSNRTISV--INLEGNHL 571



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 151/308 (49%), Gaps = 29/308 (9%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA  L  N T  E+  + N + ++G  +F   L  N +L++L+LS N +GD+G K +   
Sbjct: 271 LANLLAKNTTLRELILSYNALGSSGAVSFAAGLAKNKSLRSLSLSHNELGDDGTKEIALS 330

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDY------------ 288
           L  N  +  L L    +  EG+  I+  L+ N SI+ +    NN+ DY            
Sbjct: 331 LASNQSLSELNLRCNSISSEGSNYISTSLQINKSIVEIDLWGNNIGDYGATKIGVALSLN 390

Query: 289 --------------SGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
                          G  S+A AL   +S I ++ L+ N  GA+GA  +AK +    S+ 
Sbjct: 391 HSLKSINLTRNCIQQGIGSIASALCSASSKITTIDLSANALGAIGAIEIAKIIRATTSIE 450

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            + L  N     GI+ +   +S+ K  +  L++  N I  +GA ++AE IK   ++++ +
Sbjct: 451 SMTLSSNKFESNGIQHIAQAISNNKS-IRRLNLATNEIGVEGARYLAESIKLNSTIVYFD 509

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L MN +G+EG + I +AL+ N++I TI L  N I  +G  +I  +L  N  I+ ++L  N
Sbjct: 510 LAMNQLGNEGTKAITEALEYNKSIKTIVLSHNQIDIEGVQSILTLLNSNRTISVINLEGN 569

Query: 454 PIGADGAK 461
            +  D  +
Sbjct: 570 HLAPDTQR 577



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 3/212 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-NIAL 220
           ++   +D+ G N GD G   +  +L  N + + ++   N I   GI +    L S +  +
Sbjct: 363 KSIVEIDLWGNNIGDYGATKIGVALSLNHSLKSINLTRNCI-QQGIGSIASALCSASSKI 421

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            T++LS N +G  G   +  I+     +E + LSS      G + IA+ + NN  +R L 
Sbjct: 422 TTIDLSANALGAIGAIEIAKIIRATTSIESMTLSSNKFESNGIQHIAQAISNNKSIRRLN 481

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I   G   LAE++  NSTI    L  N  G  G  A+ + LE NKS++ + L  N
Sbjct: 482 LATNEIGVEGARYLAESIKLNSTIVYFDLAMNQLGNEGTKAITEALEYNKSIKTIVLSHN 541

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            I  EG++++++ L+S +  ++V+++  N ++
Sbjct: 542 QIDIEGVQSILTLLNSNR-TISVINLEGNHLA 572



 Score = 39.7 bits (91), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 36/66 (54%)

Query: 168 DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           D++    G+EG   + E+L YN++ + +  + N I   G+++   +L SN  +  +NL G
Sbjct: 509 DLAMNQLGNEGTKAITEALEYNKSIKTIVLSHNQIDIEGVQSILTLLNSNRTISVINLEG 568

Query: 228 NPIGDE 233
           N +  +
Sbjct: 569 NHLAPD 574


>gi|26348215|dbj|BAC37747.1| unnamed protein product [Mus musculus]
          Length = 312

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 170/310 (54%), Gaps = 1/310 (0%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S A N I   G KA    L  N +L TL+L  N IG  G K L D L  N  +  L L S
Sbjct: 4   SLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQS 63

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             ++D+G   +AE L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G
Sbjct: 64  NVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIG 123

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ALA+ L+ N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +G
Sbjct: 124 DRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEG 182

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  + + +    +L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+
Sbjct: 183 AQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARAL 242

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
            + L+ N  +T+LDL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L
Sbjct: 243 GQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEAL 302

Query: 496 RYNNTISILD 505
             N T+ IL+
Sbjct: 303 TVNRTLEILE 312



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 158/304 (51%), Gaps = 1/304 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G++G   LA SL  N++   +   +N I   G KA    L+ N  L +L+L  N I D+
Sbjct: 10  IGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDD 69

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           GV C+ + LV N  +  LQL    +   GA+ +A+ LK N  L+ L  ++N I   G  +
Sbjct: 70  GVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIA 129

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAEAL  N  + +L L  N    +G   L + L  N++L  L+L  NSI  EG +AL   
Sbjct: 130 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 189

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L  R   L  LD+  N +  +GA  +A  +    SL  ++L  N I    A  +  AL+ 
Sbjct: 190 L-CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQL 248

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NRT+TT+DL  N I  +GAS++A  LK N+ + +L L    IG+ GA+AL E L  +  +
Sbjct: 249 NRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTL 308

Query: 474 NTLK 477
             L+
Sbjct: 309 EILE 312



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 10/289 (3%)

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G  GA ALA+ L  N+SL  L L  NSIG  G +AL   L   +  L  L + +N I
Sbjct: 8   NQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINR-TLTSLSLQSNVI 66

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              G   VAE + + +++  + L  N IG  GA+++ADALKQNR++  +    N I  +G
Sbjct: 67  KDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRG 126

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A A+A  LK N ++ +LDL  N I   G   L   L  +  +++L L    I   GA+ +
Sbjct: 127 AIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQAL 186

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAK 549
              L  NNT+  LDL AN L D    G   ++      +SL H+    L  N++Q   A+
Sbjct: 187 TQALCRNNTLKHLDLTANLLHDR---GAQAIAVAVGENHSLTHL---HLQWNFIQAGAAR 240

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
            L Q+ + +N  LT++DL  N I D+GA ++A ALK N  +    L +A
Sbjct: 241 ALGQALQ-LNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVA 288



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 1/288 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 26  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 85

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 86  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 145

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I   G T L  AL  N T+ SL+L  N     GA AL + L  N +L+ L L  N 
Sbjct: 146 QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 205

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G +A+   +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 206 LHDRGAQAIAVAVGENH-SLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 264

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           EGA  +A ALK N T+  + L   +I S+GA A+   L  N  +  L+
Sbjct: 265 EGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILE 312



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 11/253 (4%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I  KGA  +A  +   +SL+ ++L  N IG  GA+ +ADALK NRT+T++ L  N
Sbjct: 5   LAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSN 64

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   G   +A  L  N  I+ L L  N IG  GA+ +++ LK + ++  L      IG 
Sbjct: 65  VIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGD 124

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  +A+ L+ N  +  LDL++N + D       G++    A+ S + +   +L  N +
Sbjct: 125 RGAIALAEALKVNQILENLDLQSNSISDM------GVTVLMRALCSNQTLSSLNLRENSI 178

Query: 546 --QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
             +GA+ L Q+    N  L  +DL  N + D GA AIA A+  N   ++T L+L  NF+ 
Sbjct: 179 SPEGAQALTQAL-CRNNTLKHLDLTANLLHDRGAQAIAVAVGENH--SLTHLHLQWNFIQ 235

Query: 604 KFGQSALTDAKDL 616
                AL  A  L
Sbjct: 236 AGAARALGQALQL 248



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 102/204 (50%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 100 QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 159

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 160 RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 219

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 220 ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 279

Query: 332 LRELHLHGNSIGDEGIRALMSGLS 355
           L  L+L   SIG +G +AL   L+
Sbjct: 280 LIALYLQVASIGSQGAQALGEALT 303



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 57/132 (43%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 181 EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 240

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 241 ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 300

Query: 269 LLKNNSILRVLE 280
            L  N  L +LE
Sbjct: 301 ALTVNRTLEILE 312


>gi|320165045|gb|EFW41944.1| hypothetical protein CAOG_07076 [Capsaspora owczarzaki ATCC 30864]
          Length = 298

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/273 (39%), Positives = 155/273 (56%), Gaps = 2/273 (0%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG++G + + + L  N  + ++ L+   + D GA+AIAE L+ N+ +  L L  N
Sbjct: 21  LHDNQIGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETLRVNTTVTDLGLWKN 80

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  +L+ AL  N T+  + LNGN  G  GA A+A+ L+ N +L  L LH N +GD
Sbjct: 81  QIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGD 140

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  A+   L   K  L  L + NN I   GA  +AE +K  K+L W+NL  N IGD GA
Sbjct: 141 AGATAIAEMLKVNK-MLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGA 199

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKAL 463
           + IA+ALK N T+  + L  N I   GA AIA  LK +N+ +  L L  N IG  GA+A+
Sbjct: 200 QAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAI 259

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           +E LK +  +  L LG  QIG +GA+ +A+  +
Sbjct: 260 AEALKVNTTLIVLLLGDNQIGDAGAQAIAEAFK 292



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 2/268 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G++G   +AE+L  N T  +++   N I  AG +A    L+ N  +  L L  N IGD 
Sbjct: 26  IGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDA 85

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   L   L  N  + ++ L+   + D GA+AIAE LK N+ L  L L+NN +  +G T+
Sbjct: 86  GAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATA 145

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AE L  N  + SL L+ N  G  GA A+A+ L+ NK+L  L+L  N IGD G +A+   
Sbjct: 146 IAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEA 205

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALK 412
           L      L  L +  N I   GA  +AE +K N   L+ + L  N+IG+ GA+ IA+ALK
Sbjct: 206 LKVNT-TLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAIAEALK 264

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLK 440
            N T+  + LG N I   GA AIA   K
Sbjct: 265 VNTTLIVLLLGDNQIGDAGAQAIAEAFK 292



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 133/249 (53%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + ++++    GD G   +AE+L  N T  ++    N I  AG  A    L+ N  L  +
Sbjct: 44  LTKINLTENQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKI 103

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+GN IGD G + + + L  N  +  L L +  L D GA AIAE+LK N +L  L L+N
Sbjct: 104 DLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDN 163

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  ++AEAL  N T+  L+L+ N  G  GA A+A+ L+ N +L  L L  N IG
Sbjct: 164 NQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLQQNQIG 223

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G  A+   L      L VL +  N I   GA  +AE +K   +L+ + L  N IGD G
Sbjct: 224 DAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAIAEALKVNTTLIVLLLGDNQIGDAG 283

Query: 404 AEKIADALK 412
           A+ IA+A K
Sbjct: 284 AQAIAEAFK 292



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 158/310 (50%), Gaps = 41/310 (13%)

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           SLH   N  G  GA A+A+ L+ N +L +++L  N IGD G RA+   L   +    V D
Sbjct: 20  SLH--DNQIGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETL---RVNTTVTD 74

Query: 366 IG--NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +G   N I   GA  ++  +K  K+L+ I+L  N IGD GA+ IA+ LK N T+  + L 
Sbjct: 75  LGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLH 134

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N +   GA+AIA +LK N ++TSL L  N IG  GA A++E LK +  +  L L   QI
Sbjct: 135 NNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQI 194

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G +GA+ +A+ L+ N T+  L L+ N + D                              
Sbjct: 195 GDAGAQAIAEALKVNTTLPCLVLQQNQIGDA----------------------------- 225

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
              GA  +A++ KV N  L  + L  NEI + GA AIA+ALK N  + V  L L +N + 
Sbjct: 226 ---GAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAIAEALKVNTTLIV--LLLGDNQIG 280

Query: 604 KFGQSALTDA 613
             G  A+ +A
Sbjct: 281 DAGAQAIAEA 290



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 127/235 (54%), Gaps = 13/235 (5%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +KN +   W +L+ N IG++GA  IA+ LK N T+T I+L  N I   GA AIA  L+
Sbjct: 10  DKVKNARE--WFSLHDNQIGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETLR 67

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +T L L  N IG  GA ALS  LK +  +  + L   QIG +GA+ +A+ L+ N T
Sbjct: 68  VNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTT 127

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVV 558
           ++ L L  N L D       G +     +   K +   SL  N +   GA  +A++ K V
Sbjct: 128 LANLGLHNNKLGDA------GATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALK-V 180

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N+ LT ++L+ N+I D GA AIA+ALK N    +  L L  N +   G  A+ +A
Sbjct: 181 NKTLTWLNLSENQIGDAGAQAIAEALKVN--TTLPCLVLQQNQIGDAGAHAIAEA 233



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 92/186 (49%), Gaps = 4/186 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +++ +     GD G   +AE L  N+    +S   N I  AG  A  
Sbjct: 116 QAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIA 175

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNLS N IGD G + + + L  N  +  L L    + D GA AIAE LK
Sbjct: 176 EALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALK 235

Query: 272 -NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            NN+ L VL LN N I  +G  ++AEAL  N+T+  L L  N  G  GA A+A+     K
Sbjct: 236 VNNTGLIVLFLNENEIGNAGAQAIAEALKVNTTLIVLLLGDNQIGDAGAQAIAEAF---K 292

Query: 331 SLRELH 336
           S  ELH
Sbjct: 293 SGAELH 298


>gi|351700213|gb|EHB03132.1| Protein NLRC3 [Heterocephalus glaber]
          Length = 737

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +++D+     G +G   LA++L  N+T   +S   N I   G +     L+ N +LK
Sbjct: 394 RSLTTLDLRSNTIGPQGAKGLADALKINRTLTSLSLQKNSIGPLGAQKMAEALKQNKSLK 453

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L LS N IGD G K L + L  N G+  L L S  + D G  A+   L  N  L  L L
Sbjct: 454 ELMLSSNSIGDGGAKALAEALKVNQGLLSLDLQSNSISDAGLAALMGALCANQTLLSLNL 513

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  +LA AL  N+T++ L L  N     GA A+A  +  N +L+ LHL  N 
Sbjct: 514 RENSISPKGAQALAHALSSNTTLKHLDLTANLLYDQGAQAIAVAMRENCALKSLHLQWNF 573

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I  +  RAL   L      L  LD+  N+I  +GA  +A  +K   +L  + L +  IG 
Sbjct: 574 IQVDAARALGQAL-QLNSSLTSLDLQENAIRDEGASALATALKVNTALTALYLQVASIGA 632

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA  + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L L  N +G DG  
Sbjct: 633 PGALALGEALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLSLQENSLGMDGVI 692

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            ++  L  +  +  + L    IG SGA  +++ ++ N  +  +++
Sbjct: 693 GVAMALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPMCTVEM 737



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 210/444 (47%), Gaps = 35/444 (7%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
            L     +L    S+ +    F D  +  L   L G +   +++S A N I+  G KA  
Sbjct: 328 VLQSLLPQLLYCQSLRLDTNQFQDPVMELLGSMLSGKDCRIQKISLAENQISNKGAKALA 387

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N +L TL+L  N IG +G K L D L  N  +  L L    +   GA+ +AE LK
Sbjct: 388 RSLLVNRSLTTLDLRSNTIGPQGAKGLADALKINRTLTSLSLQKNSIGPLGAQKMAEALK 447

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L+ L L++N I   G  +LAEAL  N  + SL L  N     G  AL   L  N++
Sbjct: 448 QNKSLKELMLSSNSIGDGGAKALAEALKVNQGLLSLDLQSNSISDAGLAALMGALCANQT 507

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L  NSI  +G +AL   LSS    L  LD+  N +  +GA  +A  ++   +L  
Sbjct: 508 LLSLNLRENSISPKGAQALAHALSSNT-TLKHLDLTANLLYDQGAQAIAVAMRENCALKS 566

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N I  + A  +  AL+ N ++T++DL  N I  +GASA+A  LK N+ +T+L L 
Sbjct: 567 LHLQWNFIQVDAARALGQALQLNSSLTSLDLQENAIRDEGASALATALKVNTALTALYLQ 626

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              IGA GA AL E L  +  +  L L    IG SGA+ +A+ L+ N+++  L L+ N L
Sbjct: 627 VASIGAPGALALGEALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLSLQENSL 686

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
             +   G  G++   S  + L+H                              I+L  N 
Sbjct: 687 GMD---GVIGVAMALSGNHGLQH------------------------------INLQGNH 713

Query: 572 IRDDGAFAIAQALKANEDVAVTSL 595
           I + GA  I++A+K N  +    +
Sbjct: 714 IGESGARMISEAIKTNAPMCTVEM 737



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 157/299 (52%), Gaps = 1/299 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K+ ++   + +S  + GD G   LAE+L  NQ    +   +N I+ AG+ A  
Sbjct: 440 QKMAEALKQNKSLKELMLSSNSIGDGGAKALAEALKVNQGLLSLDLQSNSISDAGLAALM 499

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G L +N  L +LNL  N I  +G + L   L  N  ++ L L++  L D+GA+AIA  ++
Sbjct: 500 GALCANQTLLSLNLRENSISPKGAQALAHALSSNTTLKHLDLTANLLYDQGAQAIAVAMR 559

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L+ L L  N I      +L +AL  NS++ SL L  N     GA+ALA  L+ N +
Sbjct: 560 ENCALKSLHLQWNFIQVDAARALGQALQLNSSLTSLDLQENAIRDEGASALATALKVNTA 619

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L   SIG  G  AL   L+  +  L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 620 LTALYLQVASIGAPGALALGEALAVNR-TLEILDLRGNAIGVSGAKALANALKVNSSLRR 678

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           ++L  N +G +G   +A AL  N  +  I+L GN+I   GA  I+  +K N+ + ++++
Sbjct: 679 LSLQENSLGMDGVIGVAMALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPMCTVEM 737



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 151/281 (53%), Gaps = 7/281 (2%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 340 QSLRLDTNQFQDPVMELLGSMLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTTL 399

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L  N+I   GA  +A  LK N  +  L L+ 
Sbjct: 400 DLRSNTIGPQGAKGLADALKINRTLTSLSLQKNSIGPLGAQKMAEALKQNKSLKELMLSS 459

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GAKAL+E LK +  + +L L    I  +G   +   L  N T+  L+LR N + 
Sbjct: 460 NSIGDGGAKALAEALKVNQGLLSLDLQSNSISDAGLAALMGALCANQTLLSLNLRENSIS 519

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
            +   G   L+   S+  +LKH+   +  + Y QGA+ +A + +  N AL S+ L +N I
Sbjct: 520 PK---GAQALAHALSSNTTLKHLDLTANLL-YDQGAQAIAVAMR-ENCALKSLHLQWNFI 574

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + D A A+ QAL+ N   ++TSL+L  N +   G SAL  A
Sbjct: 575 QVDAARALGQALQLNS--SLTSLDLQENAIRDEGASALATA 613



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/284 (35%), Positives = 155/284 (54%), Gaps = 12/284 (4%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           ++++ L  N I ++G +AL   L   +  L  LD+ +N+I  +GA  +A+ +K  ++L  
Sbjct: 368 IQKISLAENQISNKGAKALARSLLVNR-SLTTLDLRSNTIGPQGAKGLADALKINRTLTS 426

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N IG  GA+K+A+ALKQN+++  + L  N+I   GA A+A  LK N  + SLDL 
Sbjct: 427 LSLQKNSIGPLGAQKMAEALKQNKSLKELMLSSNSIGDGGAKALAEALKVNQGLLSLDLQ 486

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I   G  AL   L  +  + +L L    I   GA+ +A  L  N T+  LDL AN L
Sbjct: 487 SNSISDAGLAALMGALCANQTLLSLNLRENSISPKGAQALAHALSSNTTLKHLDLTANLL 546

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAF 569
            D+   G   ++       +LK +    L  N++Q   A+ L Q+ ++ N +LTS+DL  
Sbjct: 547 YDQ---GAQAIAVAMRENCALKSL---HLQWNFIQVDAARALGQALQL-NSSLTSLDLQE 599

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N IRD+GA A+A ALK N   A+T+L L    +   G  AL +A
Sbjct: 600 NAIRDEGASALATALKVN--TALTALYLQVASIGAPGALALGEA 641


>gi|320169274|gb|EFW46173.1| hypothetical protein CAOG_04141 [Capsaspora owczarzaki ATCC 30864]
          Length = 1055

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 222/442 (50%), Gaps = 35/442 (7%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            ++++L  N T  E+S     + A G ++    L  N  L TL++     G      +  
Sbjct: 269 VMSDALTQNTTLTELS---GYLDANGARSMAKALTQNATLTTLHVHSGKFGPAEANSIAA 325

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
           IL  N+ +  L L +  + D GA AI E LK+N+ L  L L +N I  +G  ++ EAL  
Sbjct: 326 ILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDNDIGSAGTQAIGEALKT 385

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N  + +L L+   G A GA A+A+ L  NK+L  L  +  SIGD G+ A++  L  +   
Sbjct: 386 NLALTTLVLSTEIGEA-GARAIAEALVCNKTLTTLSQYWCSIGDAGVEAIVHAL-EKNTT 443

Query: 361 LAVLDIGNNSISAKGA-FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           L  L++ NN     GA   +   ++   +L  ++L  N++   G + IA+AL +N ++T 
Sbjct: 444 LTSLNLKNNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQAIAEALAKNTSLTK 503

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + L G+ +   GA AIA  LK N+ +T+LD      G  GA+A+++ L+ +  + TL   
Sbjct: 504 LSLMGDEMEVAGAQAIATALKSNTTLTTLDW----FGDAGAQAIADALRQNKTLTTL--- 556

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
             QIG +G + +   L  NNT++ L+L  N + D    G N ++    +  SL  +    
Sbjct: 557 --QIGTAGLQAIGRALAQNNTLTTLNLSRNPIDD---VGANSIAEMLKSNTSLTTL--DQ 609

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDL--------AFNEIRDDGAFAIAQALKANEDVA 591
           LC    + A+ L Q     N ALT++DL        AFN I   GA AIA+ALK N+   
Sbjct: 610 LCFKVHEIAEALKQ-----NTALTTLDLSSNARGFIAFNPIGAVGAQAIAEALKQNK--T 662

Query: 592 VTSLNLANNFLTKFGQSALTDA 613
           +T+L L NN +   G   + +A
Sbjct: 663 LTTLRLNNNAIGTAGVKPIAEA 684



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 229/484 (47%), Gaps = 63/484 (13%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           +GK       ++    K+    +++ +     GD G   + E+L  N T   +    N I
Sbjct: 312 SGKFGPAEANSIAAILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDNDI 371

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN---------------AG 247
            +AG +A    L++N+AL TL LS   IG+ G + + + LV N               AG
Sbjct: 372 GSAGTQAIGEALKTNLALTTLVLS-TEIGEAGARAIAEALVCNKTLTTLSQYWCSIGDAG 430

Query: 248 VERL--------QLSSVDLRD-----EGAKA-IAELLKNNSILRVLELNNNMIDYSGFTS 293
           VE +         L+S++L++      GA+A I  +L+ N+ L  L+L  N ++  GF +
Sbjct: 431 VEAIVHALEKNTTLTSLNLKNNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQA 490

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL +N+++  L L G+     GA A+A  L+ N +L  L    +  GD G +A+   
Sbjct: 491 IAEALAKNTSLTKLSLMGDEMEVAGAQAIATALKSNTTLTTL----DWFGDAGAQAIADA 546

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L   K  L  L IG   + A G       +    +L  +NL  N I D GA  IA+ LK 
Sbjct: 547 LRQNK-TLTTLQIGTAGLQAIG-----RALAQNNTLTTLNLSRNPIDDVGANSIAEMLKS 600

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL--------AYNPIGADGAKALSE 465
           N ++TT+D     +H      IA  LK N+ +T+LDL        A+NPIGA GA+A++E
Sbjct: 601 NTSLTTLDQLCFKVHE-----IAEALKQNTALTTLDLSSNARGFIAFNPIGAVGAQAIAE 655

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            LK +  + TL+L    IG +G + +A+ L+ N  ++ L+L    + D            
Sbjct: 656 ALKQNKTLTTLRLNNNAIGTAGVKPIAEALKVNTALTTLELEDCSIGDAETQAIAPALVQ 715

Query: 526 HSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
           ++ + SLK      L    L   GA  +A   K  N  LT++++    + D G   IA A
Sbjct: 716 NTTLTSLK------LGNGVLGKAGAHSIATVLK-QNAKLTTLEVTARFV-DSGVQMIAAA 767

Query: 584 LKAN 587
           LK N
Sbjct: 768 LKHN 771



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 225/465 (48%), Gaps = 25/465 (5%)

Query: 170 SGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           SG+ FG      +A  L  N T   +      I   G  A    L+SN  L  L L  N 
Sbjct: 312 SGK-FGPAEANSIAAILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDND 370

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG  G + + + L  N  +  L LS+ ++ + GA+AIAE L  N  L  L      I  +
Sbjct: 371 IGSAGTQAIGEALKTNLALTTLVLST-EIGEAGARAIAEALVCNKTLTTLSQYWCSIGDA 429

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGAN-ALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           G  ++  AL +N+T+ SL+L  N     GA  A+ + L+ N +L EL L  N++   G +
Sbjct: 430 GVEAIVHALEKNTTLTSLNLKNNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQ 489

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L ++   L  L +  + +   GA  +A  +K+  +L  ++ +    GD GA+ IA
Sbjct: 490 AIAEAL-AKNTSLTKLSLMGDEMEVAGAQAIATALKSNTTLTTLDWF----GDAGAQAIA 544

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           DAL+QN+T+TT+ +G     + G  AI R L  N+ +T+L+L+ NPI   GA +++E+LK
Sbjct: 545 DALRQNKTLTTLQIG-----TAGLQAIGRALAQNNTLTTLNLSRNPIDDVGANSIAEMLK 599

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN--GLRDEVCSGCNGLSFFH 526
            + ++ TL     ++       +A+ L+ N  ++ LDL +N  G       G  G     
Sbjct: 600 SNTSLTTLDQLCFKV-----HEIAEALKQNTALTTLDLSSNARGFIAFNPIGAVGAQAIA 654

Query: 527 SAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
            A+   K +    L  N +   G K +A++ K VN ALT+++L    I D    AIA AL
Sbjct: 655 EALKQNKTLTTLRLNNNAIGTAGVKPIAEALK-VNTALTTLELEDCSIGDAETQAIAPAL 713

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
             N    +TSL L N  L K G  ++        +++  EV   F
Sbjct: 714 VQN--TTLTSLKLGNGVLGKAGAHSIATVLKQNAKLTTLEVTARF 756



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 229/464 (49%), Gaps = 43/464 (9%)

Query: 154  LNEFAKELR---AFSSVDMS--GRNF------GDEGLFFLAESLGYNQTAEEVSFAANGI 202
            ++E A+ L+   A +++D+S   R F      G  G   +AE+L  N+T   +    N I
Sbjct: 614  VHEIAEALKQNTALTTLDLSSNARGFIAFNPIGAVGAQAIAEALKQNKTLTTLRLNNNAI 673

Query: 203  TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
              AG+K     L+ N AL TL L    IGD   + +   LV N  +  L+L +  L   G
Sbjct: 674  GTAGVKPIAEALKVNTALTTLELEDCSIGDAETQAIAPALVQNTTLTSLKLGNGVLGKAG 733

Query: 263  AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG--NYGGALGAN 320
            A +IA +LK N+ L  LE+    +D SG   +A AL  N+T+ +  L     Y       
Sbjct: 734  AHSIATVLKQNAKLTTLEVTARFVD-SGVQMIAAALKHNTTLTTFKLRDMKRYDPEF-ER 791

Query: 321  ALAKGLEGNKSLREL-HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             +++ L   + L ++ + HG             GL     +++ L +  N + + G   +
Sbjct: 792  EMSEPLTTERLLPQVRNPHG------------FGLEKALSRVSRLFLRENIVDSAGVQVI 839

Query: 380  AEYIKNCK-SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
             E +   K S L I   ++D G   A+ +A +LKQN  +T ++L  + +   GA AIA  
Sbjct: 840  QEVLSLIKPSKLEIYFGLDDFG---AQVLATSLKQNSWMTELNLRSSQVGPIGAQAIAEA 896

Query: 439  LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            L  N+ +  L+L+   +G  GA+A+S+ L+ +  + TL L  C IG++GA  +A+ L++N
Sbjct: 897  LTQNTKLIILNLSSTQLGDAGAEAISKALRVNTTLTTLNLRECWIGSTGAMALAEELKHN 956

Query: 499  NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
              ++  DL  N +RD   SG N ++   S   +L  +    L  N++   GA+ LA++  
Sbjct: 957  VGLTSFDLSRNSIRD---SGANAMAAVISQNTTLTTL---DLGKNHIGDAGAERLAEAL- 1009

Query: 557  VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
            + N  L  +DL +NEI + G  A+  AL  N+  A  SLNL+ N
Sbjct: 1010 LRNTTLKVLDLWYNEIGEAGELALDNAL--NQKSAFVSLNLSEN 1051



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 217/494 (43%), Gaps = 86/494 (17%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+   N    G   +AE+L  N +  ++S   + +  AG +A    L+SN  L TL
Sbjct: 473 LTELDLGANNLNSVGFQAIAEALAKNTSLTKLSLMGDEMEVAGAQAIATALKSNTTLTTL 532

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +      GD G + + D L  N  +  LQ+ +      G +AI   L  N+ L  L L+ 
Sbjct: 533 DW----FGDAGAQAIADALRQNKTLTTLQIGTA-----GLQAIGRALAQNNTLTTLNLSR 583

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N ID  G  S+AE L  N+++ +L            + +A+ L+ N +L  L L  N+ G
Sbjct: 584 NPIDDVGANSIAEMLKSNTSLTTLD-----QLCFKVHEIAEALKQNTALTTLDLSSNARG 638

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
                                 I  N I A GA  +AE +K  K+L  + L  N IG  G
Sbjct: 639 F---------------------IAFNPIGAVGAQAIAEALKQNKTLTTLRLNNNAIGTAG 677

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            + IA+ALK N  +TT++L   +I      AIA  L  N+ +TSL L    +G  GA ++
Sbjct: 678 VKPIAEALKVNTALTTLELEDCSIGDAETQAIAPALVQNTTLTSLKLGNGVLGKAGAHSI 737

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR---------------- 507
           + VLK +  + TL++   +   SG + +A  L++N T++   LR                
Sbjct: 738 ATVLKQNAKLTTLEVT-ARFVDSGVQMIAAALKHNTTLTTFKLRDMKRYDPEFEREMSEP 796

Query: 508 ------------ANG--------------LRDEVC--SGCNGLSFFHSAIYSLKHMLFYS 539
                        +G              LR+ +   +G   +    S I   K  +++ 
Sbjct: 797 LTTERLLPQVRNPHGFGLEKALSRVSRLFLRENIVDSAGVQVIQEVLSLIKPSKLEIYFG 856

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           L  ++  GA+ LA S K  N  +T ++L  +++   GA AIA+AL  N  + +  LNL++
Sbjct: 857 LD-DF--GAQVLATSLK-QNSWMTELNLRSSQVGPIGAQAIAEALTQNTKLII--LNLSS 910

Query: 600 NFLTKFGQSALTDA 613
             L   G  A++ A
Sbjct: 911 TQLGDAGAEAISKA 924



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 147/334 (44%), Gaps = 54/334 (16%)

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++D +    +A AL +N T+ +L    NY  A+ ++AL +    N +L EL         
Sbjct: 238 VVDDTKMQPIAAALAQNKTLTTLWTQ-NYIDAVMSDALTQ----NTTLTEL--------- 283

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
                  SG                 + A GA  +A+ +    +L  ++++    G   A
Sbjct: 284 -------SGY----------------LDANGARSMAKALTQNATLTTLHVHSGKFGPAEA 320

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             IA  LKQN T+TT+ L    I   GA AI   LK N+ +T+L L  N IG+ G +A+ 
Sbjct: 321 NSIAAILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDNDIGSAGTQAIG 380

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS-GCNGLS 523
           E LK +  + TL L   +IG +GA  +A+ L  N T++ L           CS G  G+ 
Sbjct: 381 EALKTNLALTTLVLS-TEIGEAGARAIAEALVCNKTLTTLS-------QYWCSIGDAGVE 432

Query: 524 FFHSAIYSLKHMLFYSL----CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
               A+   K+    SL     I    GA+        VN  LT +DL  N +   G  A
Sbjct: 433 AIVHALE--KNTTLTSLNLKNNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQA 490

Query: 580 IAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           IA+AL  N   ++T L+L  + +   G  A+  A
Sbjct: 491 IAEALAKN--TSLTKLSLMGDEMEVAGAQAIATA 522



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 88/189 (46%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q L    K+    + +++     G  G   +AE+L  N     ++ ++  +  AG +A  
Sbjct: 863  QVLATSLKQNSWMTELNLRSSQVGPIGAQAIAEALTQNTKLIILNLSSTQLGDAGAEAIS 922

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+ N  L TLNL    IG  G   L + L  N G+    LS   +RD GA A+A ++ 
Sbjct: 923  KALRVNTTLTTLNLRECWIGSTGAMALAEELKHNVGLTSFDLSRNSIRDSGANAMAAVIS 982

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N+ L  L+L  N I  +G   LAEALL N+T++ L L  N  G  G  AL   L    +
Sbjct: 983  QNTTLTTLDLGKNHIGDAGAERLAEALLRNTTLKVLDLWYNEIGEAGELALDNALNQKSA 1042

Query: 332  LRELHLHGN 340
               L+L  N
Sbjct: 1043 FVSLNLSEN 1051


>gi|54294508|ref|YP_126923.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
 gi|53754340|emb|CAH15819.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
          Length = 464

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 150/421 (35%), Positives = 226/421 (53%), Gaps = 70/421 (16%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+++   N GDEG    A++L  NQ+   ++  AN I   G KA    L +N +L TL
Sbjct: 46  IKSLNLRNNNIGDEG----AKALAANQSLSTLNLRANNIGDEGAKA----LAANQSLSTL 97

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N IG EG K L      N  +  L L + ++ DEGAKA+A     N  L  L L  
Sbjct: 98  NLSYNNIGAEGAKALA----ANQSLSTLNLRANNIGDEGAKALAA----NQSLSTLNLRY 149

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G    A+AL  N ++ +L+L  N  G  GA ALA     N+SL  L+L  N+I 
Sbjct: 150 NNIGDEG----AKALAANQSLSTLNLRNNNIGDEGAKALA----ANQSLSTLNLSYNNIR 201

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            EG +AL +  S     L+ L++  N+I A+GA  +A      +SL  +NL  N+IGDEG
Sbjct: 202 AEGAKALAANQS-----LSTLNLRYNNIRAEGAKALAA----NQSLSTLNLSYNNIGDEG 252

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+    AL  N++++T++L  NNI  +GA A+A     N  +++L+L+YN IG +GAKAL
Sbjct: 253 AK----ALAANQSLSTLNLSYNNIGDEGAKALAA----NQSLSTLNLSYNNIGDEGAKAL 304

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
           +     + +++TL L +  I A GA+ +A     N ++S L+L  N + DE   G   L+
Sbjct: 305 AA----NQSLSTLNLSYNNIRAEGAKALA----ANQSLSTLNLSYNNIGDE---GAKALA 353

Query: 524 FFHSAIYSLKHMLFYSLCINY----LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
              S           +L ++Y     +GAK LA      N++L++++L++N I D+GA A
Sbjct: 354 ANQS---------LSTLNLSYNNIRAEGAKALA-----ANQSLSTLNLSYNNIGDEGAKA 399

Query: 580 I 580
           +
Sbjct: 400 L 400



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 152/433 (35%), Positives = 230/433 (53%), Gaps = 68/433 (15%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L  N   + ++   N I   G KA    L +N +L TLNL  N IGDEG K L      N
Sbjct: 40  LNTNPEIKSLNLRNNNIGDEGAKA----LAANQSLSTLNLRANNIGDEGAKALA----AN 91

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             +  L LS  ++  EGAKA+A     N  L  L L  N I   G    A+AL  N ++ 
Sbjct: 92  QSLSTLNLSYNNIGAEGAKALAA----NQSLSTLNLRANNIGDEG----AKALAANQSLS 143

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           +L+L  N  G  GA ALA     N+SL  L+L  N+IGDEG +AL +  S     L+ L+
Sbjct: 144 TLNLRYNNIGDEGAKALA----ANQSLSTLNLRNNNIGDEGAKALAANQS-----LSTLN 194

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N+I A+GA  +A      +SL  +NL  N+I  EGA+    AL  N++++T++L  N
Sbjct: 195 LSYNNIRAEGAKALAA----NQSLSTLNLRYNNIRAEGAK----ALAANQSLSTLNLSYN 246

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           NI  +GA A+A     N  +++L+L+YN IG +GAKAL+     + +++TL L +  IG 
Sbjct: 247 NIGDEGAKALAA----NQSLSTLNLSYNNIGDEGAKALAA----NQSLSTLNLSYNNIGD 298

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA+ +A     N ++S L+L  N +R E   G   L+   S       +   +L  N +
Sbjct: 299 EGAKALA----ANQSLSTLNLSYNNIRAE---GAKALAANQS-------LSTLNLSYNNI 344

Query: 546 --QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
             +GAK LA      N++L++++L++N IR +G    A+AL AN+  ++++LNL+ N + 
Sbjct: 345 GDEGAKALA-----ANQSLSTLNLSYNNIRAEG----AKALAANQ--SLSTLNLSYNNIG 393

Query: 604 KFGQSALTDAKDL 616
             G  AL +   L
Sbjct: 394 DEGAKALNETDPL 406



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 178/334 (53%), Gaps = 60/334 (17%)

Query: 156 EFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L A    S++++   N GDEG    A++L  NQ+   ++   N I   G KA   
Sbjct: 107 EGAKALAANQSLSTLNLRANNIGDEG----AKALAANQSLSTLNLRYNNIGDEGAKA--- 159

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L +N +L TLNL  N IGDEG K L      N  +  L LS  ++R EGAKA+A     
Sbjct: 160 -LAANQSLSTLNLRNNNIGDEGAKALAA----NQSLSTLNLSYNNIRAEGAKALAA---- 210

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA--------- 323
           N  L  L L  N I   G    A+AL  N ++ +L+L+ N  G  GA ALA         
Sbjct: 211 NQSLSTLNLRYNNIRAEG----AKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLN 266

Query: 324 -----------KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                      K L  N+SL  L+L  N+IGDEG +AL +  S     L+ L++  N+I 
Sbjct: 267 LSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQS-----LSTLNLSYNNIR 321

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           A+GA  +A      +SL  +NL  N+IGDEGA+    AL  N++++T++L  NNI ++GA
Sbjct: 322 AEGAKALAA----NQSLSTLNLSYNNIGDEGAK----ALAANQSLSTLNLSYNNIRAEGA 373

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
            A+A     N  +++L+L+YN IG +GAKAL+E 
Sbjct: 374 KALAA----NQSLSTLNLSYNNIGDEGAKALNET 403



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 155/281 (55%), Gaps = 47/281 (16%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL+L    +  + I+ L+    +   ++  L++ NN+I  +GA  +A      +SL  +N
Sbjct: 19  ELNLSNQKLNAQDIKELIVPFLNTNPEIKSLNLRNNNIGDEGAKALAA----NQSLSTLN 74

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N+IGDEGA+    AL  N++++T++L  NNI ++GA A+A     N  +++L+L  N
Sbjct: 75  LRANNIGDEGAK----ALAANQSLSTLNLSYNNIGAEGAKALAA----NQSLSTLNLRAN 126

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG +GAKAL+     + +++TL L +  IG  GA+ +A     N ++S L+LR N + D
Sbjct: 127 NIGDEGAKALAA----NQSLSTLNLRYNNIGDEGAKALA----ANQSLSTLNLRNNNIGD 178

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINY----LQGAKCLAQSFKVVNEALTSIDLAF 569
           E   G   L+   S           +L ++Y     +GAK LA      N++L++++L +
Sbjct: 179 E---GAKALAANQS---------LSTLNLSYNNIRAEGAKALA-----ANQSLSTLNLRY 221

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           N IR +G    A+AL AN+  ++++LNL+ N +   G  AL
Sbjct: 222 NNIRAEG----AKALAANQ--SLSTLNLSYNNIGDEGAKAL 256


>gi|320167147|gb|EFW44046.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1423

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 130/386 (33%), Positives = 202/386 (52%), Gaps = 24/386 (6%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL++    IG      +   L  N  + +L L   ++ + GA AIAE L+ N+ L  L+L
Sbjct: 23  TLSIQRQQIGQAEALAIARALEVNQRLTKLSLRWNEIDETGANAIAEALRENATLTQLDL 82

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NN I  SG  ++AEAL  N T+  L L+ N  GA GA+A+A+ L  N +L +L L  N 
Sbjct: 83  HNNQIGASGARAIAEALRVNKTLTQLDLHNNQIGAAGASAIAEALTVNGTLTQLGLSSNG 142

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG  G  A+   L      L  LD+ NN I A GA  +AE ++  K+L  ++L+ N IGD
Sbjct: 143 IGVGGANAIAVALRE-NATLTQLDLHNNQIGASGARAIAEALRVNKTLTQLDLHNNRIGD 201

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GAE +A+ LK N T+  + L    + + GA AIA+ L  NS ++ LDL  N IG D  +
Sbjct: 202 DGAEALAEVLKVNATLIQLHLRTTWMSNSGAQAIAKALIVNSRLSELDLYDNHIGDDAKQ 261

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV----CS 517
           A+++ L F+  +  L L              D+ R     + L L+   LR+ +     S
Sbjct: 262 AIAKALLFNSTMKGLDL--------------DIDRQTKPSADLFLQLTKLREAINESSLS 307

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKV-VNEALTSIDLAFNEIRD 574
           G     +  + +  ++      L +N  Q   A+C   + ++ +N +LTS++L  N+I D
Sbjct: 308 GLQVAPYLQTILQGVQTTRIVKLWLNKCQLGDAECQVIATELRLNTSLTSLELTDNQIGD 367

Query: 575 DGAFAIAQALKANEDVAVTSLNLANN 600
            GA +I++AL+ N+   + SLNL NN
Sbjct: 368 AGALSISEALRENK--TLQSLNLTNN 391



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 159/331 (48%), Gaps = 30/331 (9%)

Query: 155 NEFAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           N  A+ LR     + +D+     G  G   +AE+L  N+T  ++    N I AAG  A  
Sbjct: 65  NAIAEALRENATLTQLDLHNNQIGASGARAIAEALRVNKTLTQLDLHNNQIGAAGASAIA 124

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N  L  L LS N IG  G   +   L +NA + +L L +  +   GA+AIAE L+
Sbjct: 125 EALTVNGTLTQLGLSSNGIGVGGANAIAVALRENATLTQLDLHNNQIGASGARAIAEALR 184

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+NN I   G  +LAE L  N+T+  LHL   +    GA A+AK L  N  
Sbjct: 185 VNKTLTQLDLHNNRIGDDGAEALAEVLKVNATLIQLHLRTTWMSNSGAQAIAKALIVNSR 244

Query: 332 LRELHLHGNSIGDEGIRALMSGL---SSRKG-----------------KLAVLDIGNNSI 371
           L EL L+ N IGD+  +A+   L   S+ KG                 +L  L    N  
Sbjct: 245 LSELDLYDNHIGDDAKQAIAKALLFNSTMKGLDLDIDRQTKPSADLFLQLTKLREAINES 304

Query: 372 SAKGAFHVAEYIKN----CKSLLWINLYMN--DIGDEGAEKIADALKQNRTITTIDLGGN 425
           S  G   VA Y++      ++   + L++N   +GD   + IA  L+ N ++T+++L  N
Sbjct: 305 SLSG-LQVAPYLQTILQGVQTTRIVKLWLNKCQLGDAECQVIATELRLNTSLTSLELTDN 363

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            I   GA +I+  L++N  + SL+L  N IG
Sbjct: 364 QIGDAGALSISEALRENKTLQSLNLTNNQIG 394



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 175/370 (47%), Gaps = 10/370 (2%)

Query: 148 RESKQTLNEFAKELR-AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           +E   T  E  ++++ A  ++ +  +  G      +A +L  NQ   ++S   N I   G
Sbjct: 4   QEMTATQRELYEQVQNASGTLSIQRQQIGQAEALAIARALEVNQRLTKLSLRWNEIDETG 63

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
             A    L+ N  L  L+L  N IG  G + + + L  N  + +L L +  +   GA AI
Sbjct: 64  ANAIAEALRENATLTQLDLHNNQIGASGARAIAEALRVNKTLTQLDLHNNQIGAAGASAI 123

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE L  N  L  L L++N I   G  ++A AL EN+T+  L L+ N  GA GA A+A+ L
Sbjct: 124 AEALTVNGTLTQLGLSSNGIGVGGANAIAVALRENATLTQLDLHNNQIGASGARAIAEAL 183

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             NK+L +L LH N IGD+G  AL   L      L  L +    +S  GA  +A+ +   
Sbjct: 184 RVNKTLTQLDLHNNRIGDDGAEALAEVLKV-NATLIQLHLRTTWMSNSGAQAIAKALIVN 242

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             L  ++LY N IGD+  + IA AL  N T+  +DL  +      A    ++ K    I 
Sbjct: 243 SRLSELDLYDNHIGDDAKQAIAKALLFNSTMKGLDLDIDRQTKPSADLFLQLTKLREAIN 302

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADMLRYNNTISI 503
              L+    G   A  L  +L+       +KL W   CQ+G +  + +A  LR N +++ 
Sbjct: 303 ESSLS----GLQVAPYLQTILQGVQTTRIVKL-WLNKCQLGDAECQVIATELRLNTSLTS 357

Query: 504 LDLRANGLRD 513
           L+L  N + D
Sbjct: 358 LELTDNQIGD 367



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 54/226 (23%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+     GD+G   LAE L  N T  ++      ++ +G +A    L  N  L 
Sbjct: 187 KTLTQLDLHNNRIGDDGAEALAEVLKVNATLIQLHLRTTWMSNSGAQAIAKALIVNSRLS 246

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNA----------------------------------- 246
            L+L  N IGD+  + +   L+ N+                                   
Sbjct: 247 ELDLYDNHIGDDAKQAIAKALLFNSTMKGLDLDIDRQTKPSADLFLQLTKLREAINESSL 306

Query: 247 --------------GVE-----RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
                         GV+     +L L+   L D   + IA  L+ N+ L  LEL +N I 
Sbjct: 307 SGLQVAPYLQTILQGVQTTRIVKLWLNKCQLGDAECQVIATELRLNTSLTSLELTDNQIG 366

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            +G  S++EAL EN T++SL+L  N  G +    L   +     LR
Sbjct: 367 DAGALSISEALRENKTLQSLNLTNNQIGYVEETVLRHRVNQQFQLR 412


>gi|156368357|ref|XP_001627661.1| predicted protein [Nematostella vectensis]
 gi|156214577|gb|EDO35561.1| predicted protein [Nematostella vectensis]
          Length = 294

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/285 (39%), Positives = 156/285 (54%), Gaps = 1/285 (0%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  L+LS N I  +G   + ++L  N  +E  +LS   + DEGA AIA  LK NS L++
Sbjct: 11  SLIDLDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLKI 70

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L  N I   G  ++AEAL+ NST++   L     G  GA A+A  L  N +L++L+LH
Sbjct: 71  LDLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEGAIAIANALMTNSTLKKLYLH 130

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
              I   GI AL +     K  L  LD+ +N IS+KGA  +AE +   + L    L +  
Sbjct: 131 DYGIRAVGIAAL-ARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQLLETFRLCLYQ 189

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGDEGA  IA+AL  N T+  +DL GN I  +GA AIA  L  NS +  L L  + IG +
Sbjct: 190 IGDEGAIAIANALMTNSTLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDE 249

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           GA A++  L  +  +  L L    I A GA  +ADML YN  + +
Sbjct: 250 GAIAIANALMTNSTLKKLHLHTYGIRAVGAAALADMLYYNTELEV 294



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 145/277 (52%), Gaps = 1/277 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S      +G   +AE L  NQ  E    + N I   G  A    L++N  LK L+L+
Sbjct: 15  LDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLKILDLT 74

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IG+EG K + + L+ N+ ++   L   ++ DEGA AIA  L  NS L+ L L++  I
Sbjct: 75  KNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEGAIAIANALMTNSTLKKLYLHDYGI 134

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  +LA   L   ++  L L+ N   + GA A+A+ L  N+ L    L    IGDEG
Sbjct: 135 RAVGIAALARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQLLETFRLCLYQIGDEG 194

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A+ + L +    L  LD+  N I  +GA  +AE +    +L  ++LY ++IGDEGA  
Sbjct: 195 AIAIANALMTN-STLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDEGAIA 253

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           IA+AL  N T+  + L    I + GA+A+A +L  N+
Sbjct: 254 IANALMTNSTLKKLHLHTYGIRAVGAAALADMLYYNT 290



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 159/333 (47%), Gaps = 39/333 (11%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA   L   ++  L L+ N   + GA A+A+ L  N+ L    L  N IGDEG  A+ +
Sbjct: 1   ALARTQLHEPSLIDLDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIAN 60

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L +    L +LD+  N+I  +GA  +AE +    +L   +L   +IGDEGA  IA+AL 
Sbjct: 61  ALKTN-STLKILDLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEGAIAIANALM 119

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+  + L    I + G +A+AR       +  LDL+ N I + GA A++E+L  +  
Sbjct: 120 TNSTLKKLYLHDYGIRAVGIAALARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQL 179

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           + T +L   QIG  GA  +A+ L  N+T+  LDL  N + DE                  
Sbjct: 180 LETFRLCLYQIGDEGAIAIANALMTNSTLKKLDLEGNYIGDE------------------ 221

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                         GAK +A++  + N  L  + L  + I D+GA AIA AL  N    +
Sbjct: 222 --------------GAKAIAEAL-MTNSTLKELHLYESNIGDEGAIAIANALMTNS--TL 264

Query: 593 TSLNLANNFLTKFGQSALTDAKDLVYEMSEKEV 625
             L+L    +   G +AL    D++Y  +E EV
Sbjct: 265 KKLHLHTYGIRAVGAAALA---DMLYYNTELEV 294



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 97/213 (45%), Gaps = 40/213 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           +  TL EF          D+   N GDEG   +A +L  N T +++     GI A GI A
Sbjct: 92  TNSTLKEF----------DLCDTNIGDEGAIAIANALMTNSTLKKLYLHDYGIRAVGIAA 141

Query: 210 FD----------------------------GVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
                                          +L  N  L+T  L    IGDEG   + + 
Sbjct: 142 LARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQLLETFRLCLYQIGDEGAIAIANA 201

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+ N+ +++L L    + DEGAKAIAE L  NS L+ L L  + I   G  ++A AL+ N
Sbjct: 202 LMTNSTLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDEGAIAIANALMTN 261

Query: 302 STIRSLHLNGNYG-GALGANALAKGLEGNKSLR 333
           ST++ LHL+  YG  A+GA ALA  L  N  L 
Sbjct: 262 STLKKLHLH-TYGIRAVGAAALADMLYYNTELE 293



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 58/105 (55%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GDEG   +A +L  N T +++    N I   G KA    L +N  LK L+L  + IGDE
Sbjct: 190 IGDEGAIAIANALMTNSTLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDE 249

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           G   + + L+ N+ +++L L +  +R  GA A+A++L  N+ L V
Sbjct: 250 GAIAIANALMTNSTLKKLHLHTYGIRAVGAAALADMLYYNTELEV 294


>gi|320164769|gb|EFW41668.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 515

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 163/301 (54%), Gaps = 8/301 (2%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS + IGD   + +   L   A    + LS   +   GA AI E LK N+ L+ L+L++N
Sbjct: 23  LSRSQIGDAEAQAVAKALKFTATTTYVDLSENHISCAGALAIVEALKMNTRLKFLDLSDN 82

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AEAL  N T+  +HL+ +     GA ALA+ L+ N++L  LHL  N IGD
Sbjct: 83  RIGDAGAQAIAEALTVNKTLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHIGD 142

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G +AL   L      L  L +  N I   GA  +AE ++  +++  ++L  N IGD G 
Sbjct: 143 AGAQALGEALEVNT-TLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGV 201

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IA+ALK N T+  + L  N I + GA+A+A  LK N+ +    L  N IG  GA+AL+
Sbjct: 202 QAIAEALKVNTTLKELLLSDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQALA 261

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR-------DEVCS 517
           E LK +  +  L L + QIG  GA+ +A+ LR N T++ L L +N +        D  C+
Sbjct: 262 EALKVNKTLTELWLNFNQIGDVGAQAIAEALRVNKTLTQLVLFSNCIGKLGSQAIDAACA 321

Query: 518 G 518
           G
Sbjct: 322 G 322



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 159/297 (53%), Gaps = 1/297 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V +S    GD     +A++L +  T   V  + N I+ AG  A    L+ N  LK L+LS
Sbjct: 21  VLLSRSQIGDAEAQAVAKALKFTATTTYVDLSENHISCAGALAIVEALKMNTRLKFLDLS 80

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + + + L  N  +  + LS+  + + GA A+AE LK N  L  L L  N I
Sbjct: 81  DNRIGDAGAQAIAEALTVNKTLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHI 140

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             +G  +L EAL  N+T+  L L+ N  G  GA A+A+ ++ N+++  L L+ N IGD G
Sbjct: 141 GDAGAQALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAG 200

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           ++A+   L      L  L + +N I   GA  +AE +K   ++    L  N IGD GA+ 
Sbjct: 201 VQAIAEALKVNT-TLKELLLSDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQA 259

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           +A+ALK N+T+T + L  N I   GA AIA  L+ N  +T L L  N IG  G++A+
Sbjct: 260 LAEALKVNKTLTELWLNFNQIGDVGAQAIAEALRVNKTLTQLVLFSNCIGKLGSQAI 316



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 164/318 (51%), Gaps = 36/318 (11%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++A+AL   +T   + L+ N+    GA A+ + L+ N  L+ L L  N IGD G +A+  
Sbjct: 35  AVAKALKFTATTTYVDLSENHISCAGALAIVEALKMNTRLKFLDLSDNRIGDAGAQAIAE 94

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L+  K  L+ + + N+ IS  GA  +AE +K  ++L  ++L  N IGD GA+ + +AL+
Sbjct: 95  ALTVNK-TLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHIGDAGAQALGEALE 153

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+T + L  N I   GA AIA V++ N  +  LDL  N IG  G +A++E LK +  
Sbjct: 154 VNTTLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTT 213

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           +  L L   QIG +GA  +A+ L+ N  +    L  N + D                   
Sbjct: 214 LKELLLSDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDA------------------ 255

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                         GA+ LA++ KV N+ LT + L FN+I D GA AIA+AL+ N+   +
Sbjct: 256 --------------GAQALAEALKV-NKTLTELWLNFNQIGDVGAQAIAEALRVNK--TL 298

Query: 593 TSLNLANNFLTKFGQSAL 610
           T L L +N + K G  A+
Sbjct: 299 TQLVLFSNCIGKLGSQAI 316



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 123/254 (48%), Gaps = 29/254 (11%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  S + +S     + G   LAE+L  N+T   +    N I  AG +A    L+ N  L 
Sbjct: 100 KTLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHIGDAGAQALGEALEVNTTLT 159

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IGD G + + +++  N  V  L L+   + D G +AIAE LK N+ L+ L L
Sbjct: 160 WLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTTLKELLL 219

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++N I  +G T+LAEAL  N+ +R   L  N  G  GA ALA+ L+ NK+L EL L+ N 
Sbjct: 220 SDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQALAEALKVNKTLTELWLNFNQ 279

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G +A                             +AE ++  K+L  + L+ N IG 
Sbjct: 280 IGDVGAQA-----------------------------IAEALRVNKTLTQLVLFSNCIGK 310

Query: 402 EGAEKIADALKQNR 415
            G++ I  A   NR
Sbjct: 311 LGSQAIDAACAGNR 324



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 105/197 (53%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K     +++ +   + GD G   L E+L  N T   +    N I  AG +A   V
Sbjct: 120 LAEALKVNETLTNLHLVKNHIGDAGAQALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEV 179

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +Q N  +  L+L+ N IGD GV+ + + L  N  ++ L LS   + + GA A+AE LK N
Sbjct: 180 VQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTTLKELLLSDNQIGNAGATALAEALKVN 239

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +R   L NN I  +G  +LAEAL  N T+  L LN N  G +GA A+A+ L  NK+L 
Sbjct: 240 TAMRKFALLNNQIGDAGAQALAEALKVNKTLTELWLNFNQIGDVGAQAIAEALRVNKTLT 299

Query: 334 ELHLHGNSIGDEGIRAL 350
           +L L  N IG  G +A+
Sbjct: 300 QLVLFSNCIGKLGSQAI 316



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 86/179 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E  +     + + +     GD G   +AE +  N+T   +    N I  AG++A  
Sbjct: 146 QALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIA 205

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  LK L LS N IG+ G   L + L  N  + +  L +  + D GA+A+AE LK
Sbjct: 206 EALKVNTTLKELLLSDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQALAEALK 265

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            N  L  L LN N I   G  ++AEAL  N T+  L L  N  G LG+ A+     GN+
Sbjct: 266 VNKTLTELWLNFNQIGDVGAQAIAEALRVNKTLTQLVLFSNCIGKLGSQAIDAACAGNR 324


>gi|320168023|gb|EFW44922.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 487

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 147/259 (56%), Gaps = 7/259 (2%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N  +  L L NN ID +   ++AEAL    T+  L+L+ N  G  GA A+A+ L+GN
Sbjct: 44  LKVNKTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGN 103

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K++ EL+++GN IGD G   +++ +         L + NN     GA  +AE +K  K+L
Sbjct: 104 KTVTELNMNGNQIGD-GEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTL 162

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + + L  N IGD GA+ IA+AL+ N+T+T + L  N I   GA AIA  L+ N  ++ L+
Sbjct: 163 IELVLGGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLN 222

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  GA+A++E LK +  + TL L W +I  +GA+ +A  L+ N T+  LDLR+N
Sbjct: 223 LIDNQIGDAGAQAIAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSN 282

Query: 510 GLRDEVCSGCNGLSFFHSA 528
                 C G  GL     A
Sbjct: 283 ------CIGNAGLQAIREA 295



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 139/270 (51%), Gaps = 5/270 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  +  L L  N I D     + + L     +  L LS   +   GA+AIAE LK N
Sbjct: 44  LKVNKTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGN 103

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L +N N I       +AE L  N+T  +L L  N+ G  GA A+A+ L+ NK+L 
Sbjct: 104 KTVTELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLI 163

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L GN IGD G +A+   L   K  L  L +  N I   GA  +AE ++  K+L W+N
Sbjct: 164 ELVLGGNQIGDAGAQAIAEALRVNK-TLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLN 222

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD GA+ IA+ALK N  + T+ L  N I   GA  IA  LK N+ +  LDL  N
Sbjct: 223 LIDNQIGDAGAQAIAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSN 282

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            IG  G +A+ E  + +  ++ L    CQI
Sbjct: 283 CIGNAGLQAIREASQVNRTLSNL----CQI 308



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  V  L L +  + D  A  IAE LK    L  L L++N I ++G  ++AEAL  N T+
Sbjct: 47  NKTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGNKTV 106

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             L++NGN  G   A  +A+ L+ N +   L L  N  G  G RA+   L   K  L  L
Sbjct: 107 TELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNK-TLIEL 165

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +G N I   GA  +AE ++  K+L  + L  N IGD GA+ IA+AL+ N+T++ ++L  
Sbjct: 166 VLGGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLNLID 225

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N I   GA AIA  LK N  + +L L +N I   GA+ ++  LK +  +  L L    IG
Sbjct: 226 NQIGDAGAQAIAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSNCIG 285

Query: 485 ASGAEFVADMLRYNNTISIL 504
            +G + + +  + N T+S L
Sbjct: 286 NAGLQAIREASQVNRTLSNL 305



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 5/261 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +++ +      D     +AE+L   +T  E+  + N I  AG +A    L+ N  + 
Sbjct: 48  KTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGNKTVT 107

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN++GN IGD   + + ++L  N     L+L++      GA+AIAE LK N  L  L L
Sbjct: 108 ELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLIELVL 167

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I  +G  ++AEAL  N T+  L L+ N  G  GA A+A+ L+ NK+L  L+L  N 
Sbjct: 168 GGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLNLIDNQ 227

Query: 342 IGDEGIRALMSGLSSRKGKLAV--LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           IGD G +A+   L   KG + V  L +  N I   GA  +A  +K   +L W++L  N I
Sbjct: 228 IGDAGAQAIAEAL---KGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSNCI 284

Query: 400 GDEGAEKIADALKQNRTITTI 420
           G+ G + I +A + NRT++ +
Sbjct: 285 GNAGLQAIREASQVNRTLSNL 305



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 34/262 (12%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L+ N I +   +A+   L   K  +  L + NN I    A  +AE +K  K+L  + L
Sbjct: 25  LDLYDNQIDEAEAQAIAEALKVNK-TVTALWLKNNQIDDAAANTIAEALKVTKTLSELYL 83

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IG  GA+ IA+ALK N+T+T +++ GN I    A  IA +LK N+  T+L LA N 
Sbjct: 84  SHNQIGHAGAQAIAEALKGNKTVTELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNH 143

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            G  GA+A++E LK +  +  L LG  QIG +GA+ +A+ LR N T++ L L  N + D 
Sbjct: 144 FGCAGARAIAEALKMNKTLIELVLGGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDA 203

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                           GAK +A++ +V N+ L+ ++L  N+I D
Sbjct: 204 --------------------------------GAKAIAEALQV-NKTLSWLNLIDNQIGD 230

Query: 575 DGAFAIAQALKANEDVAVTSLN 596
            GA AIA+ALK N  V    L+
Sbjct: 231 AGAQAIAEALKGNMPVQTLYLD 252



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 124/225 (55%), Gaps = 11/225 (4%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           W++LY N I +  A+ IA+ALK N+T+T + L  N I    A+ IA  LK    ++ L L
Sbjct: 24  WLDLYDNQIDEAEAQAIAEALKVNKTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYL 83

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           ++N IG  GA+A++E LK +  +  L +   QIG   A+ +A+ML+ N T + L L  N 
Sbjct: 84  SHNQIGHAGAQAIAEALKGNKTVTELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNH 143

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLA 568
                  GC G      A+   K ++   L  N +   GA+ +A++ + VN+ LT + L 
Sbjct: 144 F------GCAGARAIAEALKMNKTLIELVLGGNQIGDAGAQAIAEALR-VNKTLTRLGLD 196

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            N+I D GA AIA+AL+ N+   ++ LNL +N +   G  A+ +A
Sbjct: 197 KNQIGDAGAKAIAEALQVNK--TLSWLNLIDNQIGDAGAQAIAEA 239



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 103/199 (51%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +  + ++M+G   GD     +AE L  N T   +  A N    AG +A  
Sbjct: 94  QAIAEALKGNKTVTELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIA 153

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L L GN IGD G + + + L  N  + RL L    + D GAKAIAE L+
Sbjct: 154 EALKMNKTLIELVLGGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQ 213

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L +N I  +G  ++AEAL  N  +++L+L+ N     GA  +A  L+ N +
Sbjct: 214 VNKTLSWLNLIDNQIGDAGAQAIAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTT 273

Query: 332 LRELHLHGNSIGDEGIRAL 350
           L+ L L  N IG+ G++A+
Sbjct: 274 LKWLDLRSNCIGNAGLQAI 292


>gi|320170062|gb|EFW46961.1| tyrosine-protein kinase transforming protein Abl [Capsaspora
           owczarzaki ATCC 30864]
          Length = 741

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 177/362 (48%), Gaps = 36/362 (9%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L +  + D  A+AI E L+ N  L  L+L  N I  +G  ++A AL  N ++  L L  N
Sbjct: 33  LENQQIGDAEAQAIGEALQVNLALTELKLRVNQIGDAGARAIAGALGANRSLILLDLFRN 92

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G+ GA A+ + L+ N +L + +L  N +GD G R +   L     KLA + +  N I 
Sbjct: 93  QIGSAGAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEALKVNT-KLAGIYLNENRIG 151

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             G   + E ++  K+L  + L  N IGD GA  I D L+ NRT+T++ L  N I   GA
Sbjct: 152 DAGVQAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVLWTNQIGPAGA 211

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AI R L  N+ +T L L+ N +G  GA+AL E +K +  +  L L   QIG +GA+ +A
Sbjct: 212 QAIGRTLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIA 271

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA 552
           D L+ N+T+  + L  N + D                                 GA  + 
Sbjct: 272 DALKVNSTLVEIFLDTNHIGDA--------------------------------GACAIG 299

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           ++   VN  L  + L  N++ D GA AI  AL+ N+   +T LNL  NF++  G SAL  
Sbjct: 300 EALN-VNRTLAELSLKENQVGDAGARAIGDALQVNK--TLTKLNLQRNFISSHGLSALKQ 356

Query: 613 AK 614
            K
Sbjct: 357 TK 358



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 166/329 (50%), Gaps = 1/329 (0%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           SK+  N + +  +A  +  +  +  GD     + E+L  N    E+    N I  AG +A
Sbjct: 14  SKKQRNVYDQARKARGAYSLENQQIGDAEAQAIGEALQVNLALTELKLRVNQIGDAGARA 73

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
             G L +N +L  L+L  N IG  G + + + L  N  + +  LS   L D GA+ I+E 
Sbjct: 74  IAGALGANRSLILLDLFRNQIGSAGAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEA 133

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N+ L  + LN N I  +G  ++ EAL  N T+  L L+ N  G  GA A+   L+ N
Sbjct: 134 LKVNTKLAGIYLNENRIGDAGVQAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVN 193

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           ++L  L L  N IG  G +A+   L++    L  L +  N +   GA  + E +K  ++L
Sbjct: 194 RTLTSLVLWTNQIGPAGAQAIGRTLATNT-TLTQLHLSKNQLGDAGAQALGEAMKVNRTL 252

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L+ N IGD GA+ IADALK N T+  I L  N+I   GA AI   L  N  +  L 
Sbjct: 253 TQLDLHTNQIGDTGAQTIADALKVNSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELS 312

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKL 478
           L  N +G  GA+A+ + L+ +  +  L L
Sbjct: 313 LKENQVGDAGARAIGDALQVNKTLTKLNL 341



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 148/297 (49%), Gaps = 4/297 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+   +D+     G  G   + E+L  N T  +   + N +  AG +     L+ N  L 
Sbjct: 82  RSLILLDLFRNQIGSAGAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEALKVNTKLA 141

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            + L+ N IGD GV+ + + L  N  + +L LS   + D GA+AI ++L+ N  L  L L
Sbjct: 142 GIYLNENRIGDAGVQAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVL 201

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I  +G  ++   L  N+T+  LHL+ N  G  GA AL + ++ N++L +L LH N 
Sbjct: 202 WTNQIGPAGAQAIGRTLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQ 261

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G + +   L      L  + +  N I   GA  + E +   ++L  ++L  N +GD
Sbjct: 262 IGDTGAQTIADALKV-NSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELSLKENQVGD 320

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            GA  I DAL+ N+T+T ++L  N I S G SA+ +  K       L+LA     AD
Sbjct: 321 AGARAIGDALQVNKTLTKLNLQRNFISSHGLSALKQTKKST---CQLELADQRTAAD 374



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 150/309 (48%), Gaps = 39/309 (12%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+ + L+ N +L EL L  N IGD G RA+   L + +  L +LD+  N I + GA  
Sbjct: 43  AQAIGEALQVNLALTELKLRVNQIGDAGARAIAGALGANR-SLILLDLFRNQIGSAGAQA 101

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           + E +K   +L    L  N +GD GA +I++ALK N  +  I L  N I   G  AI   
Sbjct: 102 IGEALKTNNTLTKFYLSDNRLGDAGAREISEALKVNTKLAGIYLNENRIGDAGVQAIGEA 161

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T L L++N IG  GA+A+ +VL+ +  + +L L   QIG +GA+ +   L  N
Sbjct: 162 LRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVLWTNQIGPAGAQAIGRTLATN 221

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            T++ L L  N L D                                 GA+ L ++ KV 
Sbjct: 222 TTLTQLHLSKNQLGDA--------------------------------GAQALGEAMKV- 248

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL-- 616
           N  LT +DL  N+I D GA  IA ALK N    +  + L  N +   G  A+ +A ++  
Sbjct: 249 NRTLTQLDLHTNQIGDTGAQTIADALKVNS--TLVEIFLDTNHIGDAGACAIGEALNVNR 306

Query: 617 -VYEMSEKE 624
            + E+S KE
Sbjct: 307 TLAELSLKE 315



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 100/199 (50%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  +  +  + + +S    GD G   + + L  N+T   +    N I  AG +A  
Sbjct: 156 QAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVLWTNQIGPAGAQAIG 215

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L +N  L  L+LS N +GD G + L + +  N  + +L L +  + D GA+ IA+ LK
Sbjct: 216 RTLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIADALK 275

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS L  + L+ N I  +G  ++ EAL  N T+  L L  N  G  GA A+   L+ NK+
Sbjct: 276 VNSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELSLKENQVGDAGARAIGDALQVNKT 335

Query: 332 LRELHLHGNSIGDEGIRAL 350
           L +L+L  N I   G+ AL
Sbjct: 336 LTKLNLQRNFISSHGLSAL 354


>gi|320165903|gb|EFW42802.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1209

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 232/480 (48%), Gaps = 53/480 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKT 222
            S++DMS    GD G   +A+ L       E+    N IT  G ++    L++  A L  
Sbjct: 305 LSTLDMSSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLFR 364

Query: 223 LNLSGNPIGDEGVKCL---------------CDILVD---------NAGVERL------- 251
           L L+ N IGD G + +               C +  D         N G + +       
Sbjct: 365 LCLNWNKIGDFGARAIAEGVAVSTALASLEYCSLAFDLWMNNNQIGNVGAQAIGSALSNL 424

Query: 252 -QLSSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             LS +DL      D GA+AIAE L+  + L    +NNN I  +G  ++  AL   + + 
Sbjct: 425 VNLSFLDLSYNKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAGAQAIGSALRNKANLS 484

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           +L    N  G  GA A+A+GL+ +K+L EL +  N IGD G +A+ + L + K  L  L 
Sbjct: 485 TLE---NKIGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRN-KANLTNLC 540

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   GA  +AE +K  K+L  + +Y N IGD GA+ I  AL+    +  +DLG N
Sbjct: 541 LHENKIGDAGARAIAEGLKTSKALTELGMYANQIGDAGAQAIGSALRNKAKLCLLDLGEN 600

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA AIA  L+ ++ +T   +  N IG  GA+A+   L+   +++++ LG  +IG 
Sbjct: 601 KIGDTGACAIAEGLQGSTALTDFRMNNNQIGNAGAQAIGSALRNKADLSSVHLGSNKIGD 660

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
           +GA  +A+ L+   ++  L + AN + D       G     SA+ +  ++    +  N +
Sbjct: 661 AGACAIAEGLQTTTSLIQLWMHANQIGDV------GAQAIGSALRNKANLSVLLMGSNRI 714

Query: 546 --QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
              GA+ +A+  +  + ALT   +  N+I D GA AI  +L+    +A+  L+L+ N ++
Sbjct: 715 GDAGARAIAEGLQ-TSTALTHFKMHVNQIGDTGALAIESSLRNKPLLAI--LHLSRNQIS 771



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 211/439 (48%), Gaps = 27/439 (6%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A +S +M     GD G   +  +L        +    N I A G  A    LQ++ AL  
Sbjct: 51  ALASFEMQANKIGDAGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTE 110

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLEL 281
           L +  N I D G + +   L + A +  L LS   + D GA+AI E L   +++L  L +
Sbjct: 111 LRMENNQISDAGAQAIGSALRNKANLSILSLSENMIGDAGARAIGEGLQTTSTLLTTLWM 170

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I  +G  ++  AL   + + +L+L+ N  G  GA A+A+G++G+ +L EL +H N 
Sbjct: 171 DKNQIGDAGAQAIGSALRNKANLSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRNQ 230

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G +A+   L + K KL  L +  N I   GA  +AE +    +L  +++  N IGD
Sbjct: 231 IGDAGAQAIGPALRN-KSKLLRLHLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGD 289

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ I  AL+    ++T+D+  N I   GA AIA  L     +T L L  N I   GA+
Sbjct: 290 AGAQPIGYALRNKENLSTLDMSSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQ 349

Query: 462 ALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS--- 517
           +++  L+     +  L L W +IG  GA  +A+ +  +  ++ L         E CS   
Sbjct: 350 SIAVALRNKKAQLFRLCLNWNKIGDFGARAIAEGVAVSTALASL---------EYCSLAF 400

Query: 518 ---------GCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSID 566
                    G  G     SA+ +L ++ F  L  N +   GA+ +A+  + +  ALT   
Sbjct: 401 DLWMNNNQIGNVGAQAIGSALSNLVNLSFLDLSYNKIGDVGARAIAEGLQALT-ALTKFR 459

Query: 567 LAFNEIRDDGAFAIAQALK 585
           +  N+I D GA AI  AL+
Sbjct: 460 MNNNQIGDAGAQAIGSALR 478



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 223/461 (48%), Gaps = 23/461 (4%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++ +     GD G   +AE +  +    E+    N I  AG +A    L++   L  L
Sbjct: 193 LSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRNQIGDAGAQAIGPALRNKSKLLRL 252

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IGD G + + + L  +  +  L +SS  + D GA+ I   L+N   L  L++++
Sbjct: 253 HLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGDAGAQPIGYALRNKENLSTLDMSS 312

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSI 342
           NMI  +G  ++A+ LL    +  L L  N    +GA ++A  L   K+ L  L L+ N I
Sbjct: 313 NMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLFRLCLNWNKI 372

Query: 343 GDEGIRALMSGLSSRKGKLAVLD---------IGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           GD G RA+  G++     LA L+         + NN I   GA  +   + N  +L +++
Sbjct: 373 GDFGARAIAEGVAVSTA-LASLEYCSLAFDLWMNNNQIGNVGAQAIGSALSNLVNLSFLD 431

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD GA  IA+ L+    +T   +  N I   GA AI   L++ + +++L+   N
Sbjct: 432 LSYNKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAGAQAIGSALRNKANLSTLE---N 488

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A++E L+    +  L +   QIG +GA+ +   LR    ++ L L  N + D
Sbjct: 489 KIGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRNKANLTNLCLHENKIGD 548

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA-LTSIDLAFNEI 572
              +G   ++       +L  +  Y+  I    GA+ +  + +  N+A L  +DL  N+I
Sbjct: 549 ---AGARAIAEGLKTSKALTELGMYANQIGD-AGAQAIGSALR--NKAKLCLLDLGENKI 602

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            D GA AIA+ L+ +   A+T   + NN +   G  A+  A
Sbjct: 603 GDTGACAIAEGLQGS--TALTDFRMNNNQIGNAGAQAIGSA 641



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 220/455 (48%), Gaps = 23/455 (5%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     GD G   +  +L        +    N I  AG +A    +Q + AL  L +  N
Sbjct: 170 MDKNQIGDAGAQAIGSALRNKANLSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRN 229

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + +   L + + + RL L    + D GA+AIAE L  ++ L  L +++N I  
Sbjct: 230 QIGDAGAQAIGPALRNKSKLLRLHLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGD 289

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G   +  AL     + +L ++ N  G  GA+A+A GL    +L EL L  N I D G +
Sbjct: 290 AGAQPIGYALRNKENLSTLDMSSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQ 349

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL-------LWINLYMND--I 399
           ++   L ++K +L  L +  N I   GA  +AE +    +L       L  +L+MN+  I
Sbjct: 350 SIAVALRNKKAQLFRLCLNWNKIGDFGARAIAEGVAVSTALASLEYCSLAFDLWMNNNQI 409

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G+ GA+ I  AL     ++ +DL  N I   GA AIA  L+  + +T   +  N IG  G
Sbjct: 410 GNVGAQAIGSALSNLVNLSFLDLSYNKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAG 469

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
           A+A+   L+   N++TL+    +IG +GA  +A+ L+ +  ++ L + +N + D      
Sbjct: 470 AQAIGSALRNKANLSTLE---NKIGDAGARAIAEGLQTSKALTELVMSSNQIGDA----- 521

Query: 520 NGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
            G     +A+ +  ++    L  N +   GA+ +A+  K  ++ALT + +  N+I D GA
Sbjct: 522 -GAKAIGTALRNKANLTNLCLHENKIGDAGARAIAEGLK-TSKALTELGMYANQIGDAGA 579

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            AI  AL+    + +  L+L  N +   G  A+ +
Sbjct: 580 QAIGSALRNKAKLCL--LDLGENKIGDTGACAIAE 612



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 221/477 (46%), Gaps = 41/477 (8%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   +  +L        +    N I   G +A    LQ+  AL +  +  N IGD
Sbjct: 5   HIGDTGARAIGLALRNKTRLTMLCLGMNDIGDVGARAIAEGLQAATALASFEMQANKIGD 64

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + +   L + A +  L L    +   GA AIA  L+ +S L  L + NN I  +G  
Sbjct: 65  AGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTELRMENNQISDAGAQ 124

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH-LHGNSIGDEGIRALM 351
           ++  AL   + +  L L+ N  G  GA A+ +GL+   +L     +  N IGD G +A+ 
Sbjct: 125 AIGSALRNKANLSILSLSENMIGDAGARAIGEGLQTTSTLLTTLWMDKNQIGDAGAQAIG 184

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
           S L + K  L+ L +  N I   GA  +AE ++   +L  + ++ N IGD GA+ I  AL
Sbjct: 185 SALRN-KANLSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRNQIGDAGAQAIGPAL 243

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           +    +  + L  N+I   GA AIA  L  ++ +T L ++ N IG  GA+ +   L+   
Sbjct: 244 RNKSKLLRLHLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGDAGAQPIGYALRNKE 303

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD------------------ 513
           N++TL +    IG +GA  +AD L     ++ L L  N + D                  
Sbjct: 304 NLSTLDMSSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLF 363

Query: 514 EVCSGCNGLSFF-----------HSAIYSLKHM-LFYSLCINYLQ----GAKCLAQSFK- 556
            +C   N +  F            +A+ SL++  L + L +N  Q    GA+ +  +   
Sbjct: 364 RLCLNWNKIGDFGARAIAEGVAVSTALASLEYCSLAFDLWMNNNQIGNVGAQAIGSALSN 423

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +VN  L+ +DL++N+I D GA AIA+ L+A    A+T   + NN +   G  A+  A
Sbjct: 424 LVN--LSFLDLSYNKIGDVGARAIAEGLQA--LTALTKFRMNNNQIGDAGAQAIGSA 476



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 149/300 (49%), Gaps = 4/300 (1%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS    K+     + + E  +  +A + + MS    GD G   +  +L        +   
Sbjct: 483 LSTLENKIGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRNKANLTNLCLH 542

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I  AG +A    L+++ AL  L +  N IGD G + +   L + A +  L L    +
Sbjct: 543 ENKIGDAGARAIAEGLKTSKALTELGMYANQIGDAGAQAIGSALRNKAKLCLLDLGENKI 602

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            D GA AIAE L+ ++ L    +NNN I  +G  ++  AL   + + S+HL  N  G  G
Sbjct: 603 GDTGACAIAEGLQGSTALTDFRMNNNQIGNAGAQAIGSALRNKADLSSVHLGSNKIGDAG 662

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A+GL+   SL +L +H N IGD G +A+ S L + K  L+VL +G+N I   GA  
Sbjct: 663 ACAIAEGLQTTTSLIQLWMHANQIGDVGAQAIGSALRN-KANLSVLLMGSNRIGDAGARA 721

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE ++   +L    +++N IGD GA  I  +L+    +  + L  N I    ASA+ R+
Sbjct: 722 IAEGLQTSTALTHFKMHVNQIGDTGALAIESSLRNKPLLAILHLSRNQIS---ASAVQRL 778



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 144/316 (45%), Gaps = 29/316 (9%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE L  ++   E+  ++N I  AG KA    L++   L  L L  N IGD 
Sbjct: 490 IGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRNKANLTNLCLHENKIGDA 549

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  +  +  L + +  + D GA+AI   L+N + L +L+L  N I  +G  +
Sbjct: 550 GARAIAEGLKTSKALTELGMYANQIGDAGAQAIGSALRNKAKLCLLDLGENKIGDTGACA 609

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AE L  ++ +    +N N  G  GA A+   L     L  +HL  N IGD         
Sbjct: 610 IAEGLQGSTALTDFRMNNNQIGNAGAQAIGSALRNKADLSSVHLGSNKIGD--------- 660

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                GA  +AE ++   SL+ + ++ N IGD GA+ I  AL+ 
Sbjct: 661 --------------------AGACAIAEGLQTTTSLIQLWMHANQIGDVGAQAIGSALRN 700

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
              ++ + +G N I   GA AIA  L+ ++ +T   +  N IG  GA A+   L+    +
Sbjct: 701 KANLSVLLMGSNRIGDAGARAIAEGLQTSTALTHFKMHVNQIGDTGALAIESSLRNKPLL 760

Query: 474 NTLKLGWCQIGASGAE 489
             L L   QI AS  +
Sbjct: 761 AILHLSRNQISASAVQ 776



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 14/223 (6%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           + +N IGD GA  I  AL+    +T + LG N+I   GA AIA  L+  + + S ++  N
Sbjct: 1   MIINHIGDTGARAIGLALRNKTRLTMLCLGMNDIGDVGARAIAEGLQAATALASFEMQAN 60

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A+   L+    ++ L L   +IGA GA  +A  L+ ++ ++ L +  N + D
Sbjct: 61  KIGDAGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTELRMENNQISD 120

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
                  G     SA+ +  ++   SL  N +   GA+ + +  +  +  LT++ +  N+
Sbjct: 121 A------GAQAIGSALRNKANLSILSLSENMIGDAGARAIGEGLQTTSTLLTTLWMDKNQ 174

Query: 572 IRDDGAFAIAQAL--KANEDVAVTSLNLANNFLTKFGQSALTD 612
           I D GA AI  AL  KAN    +++L L  N +   G  A+ +
Sbjct: 175 IGDAGAQAIGSALRNKAN----LSTLYLDENKIGDAGARAIAE 213



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            SSV +     GD G   +AE L    +  ++   AN I   G +A    L++   L  L
Sbjct: 648 LSSVHLGSNKIGDAGACAIAEGLQTTTSLIQLWMHANQIGDVGAQAIGSALRNKANLSVL 707

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +  N IGD G + + + L  +  +   ++    + D GA AI   L+N  +L +L L+ 
Sbjct: 708 LMGSNRIGDAGARAIAEGLQTSTALTHFKMHVNQIGDTGALAIESSLRNKPLLAILHLSR 767

Query: 284 NMIDYSGFTSLAEAL 298
           N I  S    L++++
Sbjct: 768 NQISASAVQRLSQSV 782


>gi|444731780|gb|ELW72126.1| Protein NLRC3 [Tupaia chinensis]
          Length = 1100

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 215/465 (46%), Gaps = 50/465 (10%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
             L     +L    S+ +    F D  +  L   L G +   +E+S A N I+  G KA  
Sbjct: 670  VLRSLLPQLLYCRSLRLDANQFQDAVMELLGSVLSGKDCRTQELSLAENQISNKGAKALA 729

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N +L +L+L  N IG  G K L D L  N  +  L L    ++D+GA+A+AE L 
Sbjct: 730  RSLLVNRSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQGNGIKDDGARAMAEALA 789

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +N  L VL L  N I   G   +A+ L +N +++ L  + N     GA ALA+ L+ N+ 
Sbjct: 790  SNQTLSVLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGAAALAEALKVNQG 849

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI--GNNSISAKGAFHVAEYIKNCKSL 389
            L  L L  NSI  EG +AL   L +    L  L+   G     A    H +         
Sbjct: 850  LESLDLRENSISPEGAQALAGALRT-NSTLRSLEYVAGGKPDRASWQLHHS--------- 899

Query: 390  LW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             W   L  N + D+GA+ IA A+ +N T+ ++ L  N + +  A A+ + L+ N  +TSL
Sbjct: 900  -WGGGLTANLLHDQGAQAIAGAVGENHTLLSLHLQWNFLQASAAIALGQALQRNGNLTSL 958

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA+GA+ + + L  N T+ ILDLR 
Sbjct: 959  DLQENAIGDEGATAVASALKTNTALTALYLQVASIGAAGAQALGEALAVNRTLEILDLRG 1018

Query: 509  NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            N +                                 + GAK LA + K VN +L  ++L 
Sbjct: 1019 NAI--------------------------------GVAGAKALANALK-VNSSLRRLNLQ 1045

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             N +  DGA  IA AL  N    +  +NL  N + + G   +++A
Sbjct: 1046 ENSLGLDGALCIATALSGNHR--LQHINLQGNNVAESGARMISEA 1088



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 173/366 (47%), Gaps = 50/366 (13%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+   + G  G   LA++L  N+T   +S   NGI   G +A    L SN  L 
Sbjct: 736  RSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQGNGIKDDGARAMAEALASNQTLS 795

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS-----------------------VDL 258
             L+L  N IG  G + + D L  N  ++ L  SS                       +DL
Sbjct: 796  VLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGAAALAEALKVNQGLESLDL 855

Query: 259  RD-----EGAKAIAELLKNNSILRVLE---------------------LNNNMIDYSGFT 292
            R+     EGA+A+A  L+ NS LR LE                     L  N++   G  
Sbjct: 856  RENSISPEGAQALAGALRTNSTLRSLEYVAGGKPDRASWQLHHSWGGGLTANLLHDQGAQ 915

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            ++A A+ EN T+ SLHL  N+  A  A AL + L+ N +L  L L  N+IGDEG  A+ S
Sbjct: 916  AIAGAVGENHTLLSLHLQWNFLQASAAIALGQALQRNGNLTSLDLQENAIGDEGATAVAS 975

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
             L +    L  L +   SI A GA  + E +   ++L  ++L  N IG  GA+ +A+ALK
Sbjct: 976  ALKTNTA-LTALYLQVASIGAAGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALK 1034

Query: 413  QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
             N ++  ++L  N++   GA  IA  L  N  +  ++L  N +   GA+ +SE +  +  
Sbjct: 1035 VNSSLRRLNLQENSLGLDGALCIATALSGNHRLQHINLQGNNVAESGARMISEAITANAP 1094

Query: 473  INTLKL 478
              T+++
Sbjct: 1095 TLTVEM 1100



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 153/347 (44%), Gaps = 48/347 (13%)

Query: 312  NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
            N    LG   L   L      R L L  N   D  +  L S LS +  +   L +  N I
Sbjct: 661  NLSACLGQGVLRSLLPQLLYCRSLRLDANQFQDAVMELLGSVLSGKDCRTQELSLAENQI 720

Query: 372  SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
            S KGA  +A  +   +SL  ++L  N IG  GA+ +ADAL+ NRT+T + L GN I   G
Sbjct: 721  SNKGAKALARSLLVNRSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQGNGIKDDG 780

Query: 432  ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK---------FHGN---------- 472
            A A+A  L  N  ++ L L  N IG  GA+ +++ LK         F  N          
Sbjct: 781  ARAMAEALASNQTLSVLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGAAAL 840

Query: 473  ---------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC-----SG 518
                     + +L L    I   GA+ +A  LR N+T+  L+  A G  D        S 
Sbjct: 841  AEALKVNQGLESLDLRENSISPEGAQALAGALRTNSTLRSLEYVAGGKPDRASWQLHHSW 900

Query: 519  CNGLS--FFHS--------AIYSLKHMLFYSLCINYLQGAKCLA--QSFKVVNEALTSID 566
              GL+    H         A+     +L   L  N+LQ +  +A  Q+ +  N  LTS+D
Sbjct: 901  GGGLTANLLHDQGAQAIAGAVGENHTLLSLHLQWNFLQASAAIALGQALQ-RNGNLTSLD 959

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            L  N I D+GA A+A ALK N   A+T+L L    +   G  AL +A
Sbjct: 960  LQENAIGDEGATAVASALKTN--TALTALYLQVASIGAAGAQALGEA 1004


>gi|320170770|gb|EFW47669.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 453

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 181/358 (50%), Gaps = 1/358 (0%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K+      +D+S    GD G   +  +L    T   ++ + N I  AG +A    LQ
Sbjct: 39  EGLKQNNHLQMLDLSDSQIGDAGAQAIGLALRNKPTLGFLNLSENKIGDAGARAIAEGLQ 98

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           ++  +  L +  N IGDEG + +   L   A +  L LS   + D G +AIAE L+ ++ 
Sbjct: 99  TSTTVTELWMRRNQIGDEGAQAIGSALQKKANLSILHLSENKIGDIGTRAIAEGLQTSTA 158

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L +  N I  +G  ++  AL     +  LHL+ N  G  GA A+A+GL+ +  L EL
Sbjct: 159 LTQLWMFTNQIGDAGAQAIGSALRNKPNLSILHLSWNKIGDAGARAIAEGLQTSTVLTEL 218

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            LH N IGD G +A+ S L + K  L+ L + NN I   GA  +AE  +   +L    + 
Sbjct: 219 GLHSNQIGDAGAQAIGSALQN-KANLSELYMNNNMIGGTGARAIAEGCQTSTALTDFRMQ 277

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GA+ +  AL+    ++ + L  NNI   GA AIA  L   + +T   ++ N I
Sbjct: 278 ANLIGDAGAQALGPALQNKANLSILYLNSNNISDTGALAIAEGLHAKTALTDFRMSINQI 337

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G  GA+A+   L+   N++ L LG  +IG +GA  VA+ L+   T++   + AN + D
Sbjct: 338 GDAGAQAIGSALRNMANLSILSLGENKIGDTGACAVAEGLQATATLTQFGMSANQVGD 395



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 169/330 (51%), Gaps = 1/330 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     GDEG   +  +L        +  + N I   G +A    LQ++ AL  L +  N
Sbjct: 108 MRRNQIGDEGAQAIGSALQKKANLSILHLSENKIGDIGTRAIAEGLQTSTALTQLWMFTN 167

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + +   L +   +  L LS   + D GA+AIAE L+ +++L  L L++N I  
Sbjct: 168 QIGDAGAQAIGSALRNKPNLSILHLSWNKIGDAGARAIAEGLQTSTVLTELGLHSNQIGD 227

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++  AL   + +  L++N N  G  GA A+A+G + + +L +  +  N IGD G +
Sbjct: 228 AGAQAIGSALQNKANLSELYMNNNMIGGTGARAIAEGCQTSTALTDFRMQANLIGDAGAQ 287

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L + K  L++L + +N+IS  GA  +AE +    +L    + +N IGD GA+ I 
Sbjct: 288 ALGPALQN-KANLSILYLNSNNISDTGALAIAEGLHAKTALTDFRMSINQIGDAGAQAIG 346

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            AL+    ++ + LG N I   GA A+A  L+  + +T   ++ N +G  GA+A+   L+
Sbjct: 347 SALRNMANLSILSLGENKIGDTGACAVAEGLQATATLTQFGMSANQVGDAGARAIGSALR 406

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYN 498
              N++ L L   QI +S  + ++  L  N
Sbjct: 407 NQTNLSKLHLSDNQISSSAVQLLSQSLPTN 436



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 181/340 (53%), Gaps = 10/340 (2%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + DE A  IAE LK N+ L++L+L+++ I  +G  ++  AL    T+  L+L+ N  G  
Sbjct: 29  ITDEDALVIAEGLKQNNHLQMLDLSDSQIGDAGAQAIGLALRNKPTLGFLNLSENKIGDA 88

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA A+A+GL+ + ++ EL +  N IGDEG +A+ S L  +K  L++L +  N I   G  
Sbjct: 89  GARAIAEGLQTSTTVTELWMRRNQIGDEGAQAIGSALQ-KKANLSILHLSENKIGDIGTR 147

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +AE ++   +L  + ++ N IGD GA+ I  AL+    ++ + L  N I   GA AIA 
Sbjct: 148 AIAEGLQTSTALTQLWMFTNQIGDAGAQAIGSALRNKPNLSILHLSWNKIGDAGARAIAE 207

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ ++V+T L L  N IG  GA+A+   L+   N++ L +    IG +GA  +A+  + 
Sbjct: 208 GLQTSTVLTELGLHSNQIGDAGAQAIGSALQNKANLSELYMNNNMIGGTGARAIAEGCQT 267

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSF 555
           +  ++   ++AN + D       G      A+ +  ++    L  N +   GA  +A+  
Sbjct: 268 STALTDFRMQANLIGDA------GAQALGPALQNKANLSILYLNSNNISDTGALAIAEGL 321

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
                ALT   ++ N+I D GA AI  AL+   ++++ SL
Sbjct: 322 HA-KTALTDFRMSINQIGDAGAQAIGSALRNMANLSILSL 360



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 164/343 (47%), Gaps = 1/343 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    GD G   +AE L  + T  E+    N I   G +A    LQ    L  L+LS
Sbjct: 78  LNLSENKIGDAGARAIAEGLQTSTTVTELWMRRNQIGDEGAQAIGSALQKKANLSILHLS 137

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + + + L  +  + +L + +  + D GA+AI   L+N   L +L L+ N I
Sbjct: 138 ENKIGDIGTRAIAEGLQTSTALTQLWMFTNQIGDAGAQAIGSALRNKPNLSILHLSWNKI 197

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             +G  ++AE L  ++ +  L L+ N  G  GA A+   L+   +L EL+++ N IG  G
Sbjct: 198 GDAGARAIAEGLQTSTVLTELGLHSNQIGDAGAQAIGSALQNKANLSELYMNNNMIGGTG 257

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            RA+  G  +    L    +  N I   GA  +   ++N  +L  + L  N+I D GA  
Sbjct: 258 ARAIAEGCQTST-ALTDFRMQANLIGDAGAQALGPALQNKANLSILYLNSNNISDTGALA 316

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           IA+ L     +T   +  N I   GA AI   L++ + ++ L L  N IG  GA A++E 
Sbjct: 317 IAEGLHAKTALTDFRMSINQIGDAGAQAIGSALRNMANLSILSLGENKIGDTGACAVAEG 376

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L+    +    +   Q+G +GA  +   LR    +S L L  N
Sbjct: 377 LQATATLTQFGMSANQVGDAGARAIGSALRNQTNLSKLHLSDN 419



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 31/322 (9%)

Query: 121 SKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLF 180
           ++  AEG+  S  A T L   FT ++     Q +    +     S + +S    GD G  
Sbjct: 146 TRAIAEGLQTST-ALTQLWM-FTNQIGDAGAQAIGSALRNKPNLSILHLSWNKIGDAGAR 203

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +AE L  +    E+   +N I  AG +A    LQ+   L  L ++ N IG  G + + +
Sbjct: 204 AIAEGLQTSTVLTELGLHSNQIGDAGAQAIGSALQNKANLSELYMNNNMIGGTGARAIAE 263

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
               +  +   ++ +  + D GA+A+   L+N + L +L LN+N I  +G  ++AE L  
Sbjct: 264 GCQTSTALTDFRMQANLIGDAGAQALGPALQNKANLSILYLNSNNISDTGALAIAEGLHA 323

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
            + +    ++ N  G  GA A+   L    +L  L L  N IGD                
Sbjct: 324 KTALTDFRMSINQIGDAGAQAIGSALRNMANLSILSLGENKIGDT--------------- 368

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
                         GA  VAE ++   +L    +  N +GD GA  I  AL+    ++ +
Sbjct: 369 --------------GACAVAEGLQATATLTQFGMSANQVGDAGARAIGSALRNQTNLSKL 414

Query: 421 DLGGNNIHSKGASAIARVLKDN 442
            L  N I S     +++ L  N
Sbjct: 415 HLSDNQISSSAVQLLSQSLPTN 436



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 11/188 (5%)

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I  + A  IA  LK N+ +  LDL+ + IG  GA+A+   L+    +  L L   +IG +
Sbjct: 29  ITDEDALVIAEGLKQNNHLQMLDLSDSQIGDAGAQAIGLALRNKPTLGFLNLSENKIGDA 88

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ 546
           GA  +A+ L+ + T++ L +R N + DE      G     SA+    ++    L  N + 
Sbjct: 89  GARAIAEGLQTSTTVTELWMRRNQIGDE------GAQAIGSALQKKANLSILHLSENKIG 142

Query: 547 --GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
             G + +A+  +  + ALT + +  N+I D GA AI  AL+   ++++  L+L+ N +  
Sbjct: 143 DIGTRAIAEGLQ-TSTALTQLWMFTNQIGDAGAQAIGSALRNKPNLSI--LHLSWNKIGD 199

Query: 605 FGQSALTD 612
            G  A+ +
Sbjct: 200 AGARAIAE 207


>gi|320163875|gb|EFW40774.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 482

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 141/243 (58%), Gaps = 1/243 (0%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A+ +AE LK N  L  L L  N +   G  ++AEAL  N+T+  L+L  N  G  GA A+
Sbjct: 38  AEVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLNLPENQIGEAGAQAI 97

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L+ N +L +L+L  N +GD+  +A    L   K  L  L +    I   GA  +AE 
Sbjct: 98  AEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNK-TLTRLKLHQVQIGDTGAQAIAEA 156

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K   +L  +NL  N IG  GA  IADALK N+T+TTI L GN I   GA AIA VLK N
Sbjct: 157 LKVNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEVLKVN 216

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +T L L+ N IG  GA+A++E +K +  +  L+LGW QIG +GA+ +A+ +    T++
Sbjct: 217 TTLTELGLSENQIGDAGAQAIAEAIKVNKILTNLELGWNQIGDAGAQAIAEAIELGTTLT 276

Query: 503 ILD 505
            L+
Sbjct: 277 RLN 279



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 155/290 (53%), Gaps = 36/290 (12%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G + A  LA+GL+ NK+L  L+L+ N +GD G +A+   L      L  L++  N I   
Sbjct: 34  GEVEAEVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNT-TLIKLNLPENQIGEA 92

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   +L  +NL  N +GD+ A+  A+ALK N+T+T + L    I   GA A
Sbjct: 93  GAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDTGAQA 152

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +T L+L++N IG  GA A+++ LK +  + T+ L   QIG +GA  +A++
Sbjct: 153 IAEALKVNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEV 212

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L+ N T++ L L  N + D                                 GA+ +A++
Sbjct: 213 LKVNTTLTELGLSENQIGDA--------------------------------GAQAIAEA 240

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            K VN+ LT+++L +N+I D GA AIA+A++      +T LN     +T+
Sbjct: 241 IK-VNKILTNLELGWNQIGDAGAQAIAEAIELG--TTLTRLNAVAQLITE 287



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 138/240 (57%), Gaps = 11/240 (4%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K  K+L W+ LY N +GD GA+ IA+ALK N T+  ++L  N I   GA AIA  
Sbjct: 41  LAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLNLPENQIGEAGAQAIAEA 100

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N+ +T L+L++N +G D AKA +E LK +  +  LKL   QIG +GA+ +A+ L+ N
Sbjct: 101 LKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDTGAQAIAEALKVN 160

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            T++ L+L  N +      G  G      A+   K +    L  N +   GA+ +A+  K
Sbjct: 161 TTLTKLNLSWNQI------GGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEVLK 214

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            VN  LT + L+ N+I D GA AIA+A+K N+   +T+L L  N +   G  A+ +A +L
Sbjct: 215 -VNTTLTELGLSENQIGDAGAQAIAEAIKVNK--ILTNLELGWNQIGDAGAQAIAEAIEL 271



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 142/285 (49%), Gaps = 29/285 (10%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S++ +    FG+     LAE L  N+    +    N +   G +A    L+ N  L  LN
Sbjct: 24  SALSVHDFEFGEVEAEVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLN 83

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG+ G + + + L  N  + +L LS   + D+ AKA AE LK N  L  L+L+  
Sbjct: 84  LPENQIGEAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQV 143

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AEAL  N+T+  L+L+ N  G  GA A+A  L+ NK++  ++L GN IGD
Sbjct: 144 QIGDTGAQAIAEALKVNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGD 203

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G RA                             +AE +K   +L  + L  N IGD GA
Sbjct: 204 AGARA-----------------------------IAEVLKVNTTLTELGLSENQIGDAGA 234

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + IA+A+K N+ +T ++LG N I   GA AIA  ++  + +T L+
Sbjct: 235 QAIAEAIKVNKILTNLELGWNQIGDAGAQAIAEAIELGTTLTRLN 279



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 137/270 (50%), Gaps = 29/270 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  K  +A + + +     GD G   +AE+L  N T  +++   N I  AG +A  
Sbjct: 39  EVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLNLPENQIGEAGAQAIA 98

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNLS N +GD+  K   + L  N  + RL+L  V + D GA+AIAE LK
Sbjct: 99  EALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDTGAQAIAEALK 158

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L L+ N I  +G  ++A+AL  N T+ +++L+GN  G  GA A+A+ L+ N +
Sbjct: 159 VNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEVLKVNTT 218

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L EL L  N IGD G +A                             +AE IK  K L  
Sbjct: 219 LTELGLSENQIGDAGAQA-----------------------------IAEAIKVNKILTN 249

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTID 421
           + L  N IGD GA+ IA+A++   T+T ++
Sbjct: 250 LELGWNQIGDAGAQAIAEAIELGTTLTRLN 279



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 13/184 (7%)

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A  +A  LK N  +T L L  N +G  GA+A++E LK +  +  L L   QIG +GA+ +
Sbjct: 38  AEVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLNLPENQIGEAGAQAI 97

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI---YSLKHMLFYSLCINYLQGA 548
           A+ L+ N T++ L+L  N + D+          F  A+    +L  +  + + I    GA
Sbjct: 98  AEALKVNTTLTKLNLSWNQVGDDAAKA------FAEALKVNKTLTRLKLHQVQIGD-TGA 150

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
           + +A++ K VN  LT ++L++N+I   GA AIA ALK N+   VT++ L+ N +   G  
Sbjct: 151 QAIAEALK-VNTTLTKLNLSWNQIGGAGAVAIADALKLNK--TVTTIYLSGNQIGDAGAR 207

Query: 609 ALTD 612
           A+ +
Sbjct: 208 AIAE 211


>gi|320165307|gb|EFW42206.1| protein kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 926

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 178/333 (53%), Gaps = 38/333 (11%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L++++I  +   S+ EAL  N T+  ++LN N  G  GA+A+A+GL  N+ L  L+++
Sbjct: 27  LSLSDSLIRATEAQSVGEALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVN 86

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G +A    L   +                            K LL  N   N 
Sbjct: 87  YNEIGDAGSQAFADALKVNR--------------------------TVKELLLQN---NL 117

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG+ GA+ I+++LK NRT+TTI LG N I   GA AI+  LK N  +T + L    IG  
Sbjct: 118 IGEAGAQAISESLKVNRTLTTIGLGWNEIGDAGAKAISESLKVNRSLTCIGLTGTHIGTV 177

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCS 517
           GA+A++E L  +  + ++  G  QIG +GA+ +A+ L+ N T++ + L  + + D+  C+
Sbjct: 178 GAQAIAEGLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDDGACA 237

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
               L        +L  ++ Y+  I  + GA+ +A++ K VN+ +T I L  N+I D GA
Sbjct: 238 IAEALKVN----TTLTEIVLYTNQIGDV-GAQAIAEALK-VNKTVTKIHLQQNQIGDAGA 291

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            AIA+ALK N    VT+L L +NFLTK G  AL
Sbjct: 292 KAIAKALKVN--TTVTTLRLWDNFLTKAGIKAL 322



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 147/263 (55%), Gaps = 1/263 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L LS   +R   A+++ E LK N  L  + LN N+   +G +++AE L  N  + +L++N
Sbjct: 27  LSLSDSLIRATEAQSVGEALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVN 86

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  G+ A A  L+ N++++EL L  N IG+ G +A+   L   +  L  + +G N 
Sbjct: 87  YNEIGDAGSQAFADALKVNRTVKELLLQNNLIGEAGAQAISESLKVNR-TLTTIGLGWNE 145

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  ++E +K  +SL  I L    IG  GA+ IA+ L  NRT+T+I  G N I   
Sbjct: 146 IGDAGAKAISESLKVNRSLTCIGLTGTHIGTVGAQAIAEGLAVNRTLTSIGFGENQIGDA 205

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  LK N+ +T + L  + IG DGA A++E LK +  +  + L   QIG  GA+ 
Sbjct: 206 GAKAIAEALKVNTTLTCISLIQSQIGDDGACAIAEALKVNTTLTEIVLYTNQIGDVGAQA 265

Query: 491 VADMLRYNNTISILDLRANGLRD 513
           +A+ L+ N T++ + L+ N + D
Sbjct: 266 IAEALKVNKTVTKIHLQQNQIGD 288



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 158/286 (55%), Gaps = 2/286 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +S + + I A   ++    L+ N  L  +NL+ N  G  G   + + L  N G+  L ++
Sbjct: 27  LSLSDSLIRATEAQSVGEALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVN 86

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
             ++ D G++A A+ LK N  ++ L L NN+I  +G  +++E+L  N T+ ++ L  N  
Sbjct: 87  YNEIGDAGSQAFADALKVNRTVKELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWNEI 146

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+++ L+ N+SL  + L G  IG  G +A+  GL+  +  L  +  G N I   
Sbjct: 147 GDAGAKAISESLKVNRSLTCIGLTGTHIGTVGAQAIAEGLAVNR-TLTSIGFGENQIGDA 205

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   +L  I+L  + IGD+GA  IA+ALK N T+T I L  N I   GA A
Sbjct: 206 GAKAIAEALKVNTTLTCISLIQSQIGDDGACAIAEALKVNTTLTEIVLYTNQIGDVGAQA 265

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           IA  LK N  +T + L  N IG  GAKA+++ LK +  + TL+L W
Sbjct: 266 IAEALKVNKTVTKIHLQQNQIGDAGAKAIAKALKVNTTVTTLRL-W 310



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/250 (38%), Positives = 136/250 (54%), Gaps = 1/250 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA AIAE L  N  L  L +N N I  +G  + A+AL  N T++ L L  N  G  GA A
Sbjct: 66  GASAIAEGLSMNQGLTNLYVNYNEIGDAGSQAFADALKVNRTVKELLLQNNLIGEAGAQA 125

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +++ L+ N++L  + L  N IGD G +A+   L   +  L  + +    I   GA  +AE
Sbjct: 126 ISESLKVNRTLTTIGLGWNEIGDAGAKAISESLKVNRS-LTCIGLTGTHIGTVGAQAIAE 184

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +   ++L  I    N IGD GA+ IA+ALK N T+T I L  + I   GA AIA  LK 
Sbjct: 185 GLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDDGACAIAEALKV 244

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +T + L  N IG  GA+A++E LK +  +  + L   QIG +GA+ +A  L+ N T+
Sbjct: 245 NTTLTEIVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQIGDAGAKAIAKALKVNTTV 304

Query: 502 SILDLRANGL 511
           + L L  N L
Sbjct: 305 TTLRLWDNFL 314



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 155/322 (48%), Gaps = 33/322 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q++ E  K  R  + ++++   FG  G   +AE L  NQ    +    N I  AG +AF 
Sbjct: 40  QSVGEALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVNYNEIGDAGSQAFA 99

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  +K L L  N IG+ G + + + L  N  +  + L   ++ D GAKAI+E LK
Sbjct: 100 DALKVNRTVKELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWNEIGDAGAKAISESLK 159

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  + L    I   G  ++AE L  N T+ S+    N  G  GA A+A+ L+ N +
Sbjct: 160 VNRSLTCIGLTGTHIGTVGAQAIAEGLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTT 219

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  + L  + IGD+                             GA  +AE +K   +L  
Sbjct: 220 LTCISLIQSQIGDD-----------------------------GACAIAEALKVNTTLTE 250

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I LY N IGD GA+ IA+ALK N+T+T I L  N I   GA AIA+ LK N+ +T+L L 
Sbjct: 251 IVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQIGDAGAKAIAKALKVNTTVTTLRLW 310

Query: 452 YNPIGADGAKALSEVLKFHGNI 473
            N +   G KAL +     GNI
Sbjct: 311 DNFLTKAGIKALKQT----GNI 328



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 14/249 (5%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G+ G   ++ESL  N+T   +    N I  AG KA    L+ N +L  + L+G  IG  
Sbjct: 118 IGEAGAQAISESLKVNRTLTTIGLGWNEIGDAGAKAISESLKVNRSLTCIGLTGTHIGTV 177

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  +      + D GAKAIAE LK N+ L  + L  + I   G  +
Sbjct: 178 GAQAIAEGLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDDGACA 237

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T+  + L  N  G +GA A+A+ L+ NK++ ++HL  N IGD G +A+   
Sbjct: 238 IAEALKVNTTLTEIVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQIGDAGAKAIAKA 297

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      +  L + +N ++  G     + +K   ++L    +++ IG       AD L Q
Sbjct: 298 LKVNT-TVTTLRLWDNFLTKAG----IKALKQTGNILCS--FVDSIG-------ADGLDQ 343

Query: 414 NRTITTIDL 422
            R  +  DL
Sbjct: 344 QRVPSPADL 352


>gi|66803749|ref|XP_635706.1| hypothetical protein DDB_G0290485 [Dictyostelium discoideum AX4]
 gi|60463940|gb|EAL62103.1| hypothetical protein DDB_G0290485 [Dictyostelium discoideum AX4]
          Length = 818

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 205/416 (49%), Gaps = 63/416 (15%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L  N  + TL LS N IG++   C+ + L+ N  +  L LS   + +EGA+ I++ +  
Sbjct: 375 LLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEISKAILV 434

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L+L+ N I   G  +L +AL   + +++++L+ N  GA G + + + +  N SL
Sbjct: 435 NTTLINLDLSQNCIGLKGSKALGQALQSTTILQTINLSKNRFGAKGIDFIVESIGKNSSL 494

Query: 333 RELHLHGNSIGD----------------------------EGIRALMSGLSSRKGKLAVL 364
            E+    N + +                            E ++ +  G+ + +  +A L
Sbjct: 495 TEVDFSKNDLNEKSSKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQ-TIAYL 553

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N  + KG   +A  +  C+S+ +++L  + IGD+GA ++ DAL QN +I  + L  
Sbjct: 554 DMSRNEFNYKGLKPLAAALSMCQSITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAF 613

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNP-IGADGAKALSEVLKFHGNINTLKLGWCQI 483
           NNI + GA+++   LK N  +  LDL+ NP IG  GA  ++E L  +  I+ L +    +
Sbjct: 614 NNIGASGATSLGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGL 673

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G  GA+ + + LR N+TI+ L LR N + DE   GC  LS       SLK          
Sbjct: 674 GPIGAKRLGEALRQNSTITDLQLRGNEIGDE---GCRALS------DSLKQ--------- 715

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                          N+++T ++L+ N I +DGA A+ +AL  N+ +A   LN  N
Sbjct: 716 ---------------NQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNN 756



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 30/363 (8%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +++S  + G+EG   +++++  N T   +  + N I   G KA    LQS   L+
Sbjct: 408 KTITHLNLSFNSIGNEGAEEISKAILVNTTLINLDLSQNCIGLKGSKALGQALQSTTILQ 467

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR---- 277
           T+NLS N  G +G+  + + +  N+ +  +  S  DL ++ +K + E ++ +  L     
Sbjct: 468 TINLSKNRFGAKGIDFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEAIRKHPCLASVNL 527

Query: 278 ------------------------VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
                                    L+++ N  +Y G   LA AL    +I  L L G+ 
Sbjct: 528 CDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYKGLKPLAAALSMCQSITYLDLTGDS 587

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNSIS 372
            G  GA  L   L  N S+  L L  N+IG  G  +L + L + +  L +LD+  N  I 
Sbjct: 588 IGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATSLGNALKTNRS-LEILDLSINPEIG 646

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA H+AE +   K +  +++  N +G  GA+++ +AL+QN TIT + L GN I  +G 
Sbjct: 647 HLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGEALRQNSTITDLQLRGNEIGDEGC 706

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            A++  LK N  IT L+L+ N I  DGAKAL E L ++ ++ +++L    I   G +F+ 
Sbjct: 707 RALSDSLKQNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMK 766

Query: 493 DML 495
           ++L
Sbjct: 767 ELL 769



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 31/310 (10%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  +S + + E  ++    +SV++       E + +++E +  +QT   +  + N     
Sbjct: 504 LNEKSSKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYK 563

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G+K     L    ++  L+L+G+ IGD+G   L D L  N  +  L L+  ++   GA +
Sbjct: 564 GLKPLAAALSMCQSITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATS 623

Query: 266 IAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           +   LK N  L +L+L+ N  I + G   +AE L  N  I  L +  N  G +GA  L +
Sbjct: 624 LGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGE 683

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N ++ +L L GN IGDEG RAL                             ++ +K
Sbjct: 684 ALRQNSTITDLQLRGNEIGDEGCRAL-----------------------------SDSLK 714

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             +S+  +NL  N I ++GA+ + +AL  N+++ +I L  NNI+++G   +  +L   S 
Sbjct: 715 QNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMKELLL-RSY 773

Query: 445 ITSLDLAYNP 454
           + +LD  + P
Sbjct: 774 LVNLDSYFYP 783



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 16/202 (7%)

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           +S +  +L  N+ IT+L+L+ N IG   A  + E L  +  I  L L +  IG  GAE +
Sbjct: 369 SSFVRMLLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEI 428

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
           +  +  N T+  LDL  N      C G  G      A+ S   +   +L  N   GAK +
Sbjct: 429 SKAILVNTTLINLDLSQN------CIGLKGSKALGQALQSTTILQTINLSKNRF-GAKGI 481

Query: 552 AQSFKVV--NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT----KF 605
               + +  N +LT +D + N++ +  +  + +A++ +  +A  S+NL +  L+    K+
Sbjct: 482 DFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEAIRKHPCLA--SVNLCDTKLSPESMKY 539

Query: 606 GQSALTDAKDLVY-EMSEKEVN 626
               +  ++ + Y +MS  E N
Sbjct: 540 ISEGIQASQTIAYLDMSRNEFN 561


>gi|330844929|ref|XP_003294360.1| hypothetical protein DICPUDRAFT_96020 [Dictyostelium purpureum]
 gi|325075192|gb|EGC29113.1| hypothetical protein DICPUDRAFT_96020 [Dictyostelium purpureum]
          Length = 735

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 212/452 (46%), Gaps = 19/452 (4%)

Query: 136 TNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           TNL S F   ++      LN    ++   +  D+S          F+   +  N T   +
Sbjct: 259 TNLFSNFANNIYPN----LNSLQLKVSTPTLFDVSS---------FVRLLMTKNTTITTL 305

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
             + NGI           L  N  +  LNLS N IG+EG + +   L  N  +  L LS 
Sbjct: 306 ELSQNGIGNKAAHCIGECLNINSTITHLNLSFNSIGNEGAEEISKALQANQKLVNLDLSQ 365

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  +G+KA+   L+N   L  + L+ N     G   + E++ +N++I S+  + N   
Sbjct: 366 NCIGLKGSKALGTALQNTQFLTTINLSKNRFGAKGIDFIIESIGKNTSITSIDFSKNDLN 425

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
              +  L+  ++ +  L  L+L    +  + ++ L  G+SS +  ++ LD+  N    KG
Sbjct: 426 EKSSQHLSSSIKKHPCLSSLNLCDTKLSSDSMKILSEGISSSQ-TMSYLDLSRNEFGYKG 484

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
              +A  + +  S+ +++L  N IGD+GA  +ADAL+QN +I  + L  NNI   GA +I
Sbjct: 485 LKPLASALASSHSITYLDLTGNSIGDKGAILLADALQQNNSIRDLSLAFNNIGMTGAISI 544

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
              LK N  +  LDL+ N     G  +++E L ++  I  L +G   +G  GA+F+ D L
Sbjct: 545 GSALKVNQSLEILDLSLNAEIGQGFSSIAEGLCYNKKIKKLSMGTTGLGPQGAKFLGDAL 604

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           RYN++I+ L LR N + DE   GC  +S       S+  +      I   +GAK L++S 
Sbjct: 605 RYNSSITDLQLRGNEIGDE---GCKAISEAFKQNNSVTELNLSGNGITN-EGAKALSESI 660

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
              N +LT I L  N I   G   + + L  N
Sbjct: 661 -FYNSSLTYIQLNHNNINPQGVQLMRETLAIN 691



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 198/401 (49%), Gaps = 36/401 (8%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           ++  N  + TL LS N IG++   C+ + L  N+ +  L LS   + +EGA+ I++ L+ 
Sbjct: 295 LMTKNTTITTLELSQNGIGNKAAHCIGECLNINSTITHLNLSFNSIGNEGAEEISKALQA 354

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L  L+L+ N I   G  +L  AL     + +++L+ N  GA G + + + +  N S+
Sbjct: 355 NQKLVNLDLSQNCIGLKGSKALGTALQNTQFLTTINLSKNRFGAKGIDFIIESIGKNTSI 414

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             +    N + ++  + L S +  +   L+ L++ +  +S+     ++E I + +++ ++
Sbjct: 415 TSIDFSKNDLNEKSSQHLSSSIK-KHPCLSSLNLCDTKLSSDSMKILSEGISSSQTMSYL 473

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N+ G +G + +A AL  + +IT +DL GN+I  KGA  +A  L+ N+ I  L LA+
Sbjct: 474 DLSRNEFGYKGLKPLASALASSHSITYLDLTGNSIGDKGAILLADALQQNNSIRDLSLAF 533

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA ++   LK + ++  L L        G   +A+ L YN  I  L +   GL 
Sbjct: 534 NNIGMTGAISIGSALKVNQSLEILDLSLNAEIGQGFSSIAEGLCYNKKIKKLSMGTTGLG 593

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
                                            QGAK L  + +  N ++T + L  NEI
Sbjct: 594 P--------------------------------QGAKFLGDALRY-NSSITDLQLRGNEI 620

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            D+G  AI++A K N   +VT LNL+ N +T  G  AL+++
Sbjct: 621 GDEGCKAISEAFKQNN--SVTELNLSGNGITNEGAKALSES 659



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 34/344 (9%)

Query: 125 AEGMNW---SVGAGTNLLS-GFT-GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGL 179
           A+G+++   S+G  T++ S  F+   L  +S Q L+   K+    SS+++       + +
Sbjct: 398 AKGIDFIIESIGKNTSITSIDFSKNDLNEKSSQHLSSSIKKHPCLSSLNLCDTKLSSDSM 457

Query: 180 FFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC 239
             L+E +  +QT   +  + N     G+K     L S+ ++  L+L+GN IGD+G   L 
Sbjct: 458 KILSEGISSSQTMSYLDLSRNEFGYKGLKPLASALASSHSITYLDLTGNSIGDKGAILLA 517

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           D L  N  +  L L+  ++   GA +I   LK N  L +L+L+ N     GF+S+AE L 
Sbjct: 518 DALQQNNSIRDLSLAFNNIGMTGAISIGSALKVNQSLEILDLSLNAEIGQGFSSIAEGLC 577

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
            N  I+ L +     G  GA  L   L  N S+ +L L GN IGDEG +A          
Sbjct: 578 YNKKIKKLSMGTTGLGPQGAKFLGDALRYNSSITDLQLRGNEIGDEGCKA---------- 627

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
                              ++E  K   S+  +NL  N I +EGA+ +++++  N ++T 
Sbjct: 628 -------------------ISEAFKQNNSVTELNLSGNGITNEGAKALSESIFYNSSLTY 668

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           I L  NNI+ +G   +   L  N ++T     + P        L
Sbjct: 669 IQLNHNNINPQGVQLMRETLAINFIVTQDSYFFPPTSTTTVSGL 712



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 165/343 (48%), Gaps = 40/343 (11%)

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           + D S F  L   + +N+TI +L L+ N  G   A+ + + L  N ++  L+L  NSIG+
Sbjct: 285 LFDVSSFVRLL--MTKNTTITTLELSQNGIGNKAAHCIGECLNINSTITHLNLSFNSIGN 342

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           EG   +   L + + KL  LD+  N I  KG+  +   ++N + L  INL  N  G +G 
Sbjct: 343 EGAEEISKALQANQ-KLVNLDLSQNCIGLKGSKALGTALQNTQFLTTINLSKNRFGAKGI 401

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + I +++ +N +IT+ID   N+++ K +  ++  +K +  ++SL+L    + +D  K LS
Sbjct: 402 DFIIESIGKNTSITSIDFSKNDLNEKSSQHLSSSIKKHPCLSSLNLCDTKLSSDSMKILS 461

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           E +     ++ L L   + G  G + +A  L  +++I+ LDL  N + D           
Sbjct: 462 EGISSSQTMSYLDLSRNEFGYKGLKPLASALASSHSITYLDLTGNSIGD----------- 510

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                +GA  LA + +  N ++  + LAFN I   GA +I  AL
Sbjct: 511 ---------------------KGAILLADALQQ-NNSIRDLSLAFNNIGMTGAISIGSAL 548

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
           K N+ + +  L+L      + GQ   + A+ L Y    K++++
Sbjct: 549 KVNQSLEILDLSLN----AEIGQGFSSIAEGLCYNKKIKKLSM 587


>gi|14993576|gb|AAK76360.1|AF272150_1 deliriumA [Dictyostelium discoideum]
          Length = 817

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 205/416 (49%), Gaps = 63/416 (15%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L  N  + TL LS N IG++   C+ + L+ N  +  L LS   + +EGA+ I++ +  
Sbjct: 375 LLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEISKAILV 434

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L+L+ N I   G  +L +AL   + +++++L+ N  GA G + + + +  N SL
Sbjct: 435 NTTLINLDLSQNCIGLKGSKALGQALQSTTILQTINLSKNRFGAKGIDFIVESIGKNSSL 494

Query: 333 RELHLHGNSIGD----------------------------EGIRALMSGLSSRKGKLAVL 364
            E+    N + +                            E ++ +  G+ + +  +A L
Sbjct: 495 TEVDFSKNDLNEKSSKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQ-TIAYL 553

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N  + KG   +A  +  C+S+ +++L  + IGD+GA ++ DAL QN +I  + L  
Sbjct: 554 DMSRNEFNYKGLKPLAAALSMCQSITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAF 613

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNP-IGADGAKALSEVLKFHGNINTLKLGWCQI 483
           NNI + GA+++   LK N  +  LDL+ NP IG  GA  ++E L  +  I+ L +    +
Sbjct: 614 NNIGASGATSLGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGL 673

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G  GA+ + + LR N+TI+ L LR N + DE   GC  LS       SLK          
Sbjct: 674 GPIGAKRLGEALRQNSTITDLQLRGNEIGDE---GCRALS------DSLKQ--------- 715

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                          N+++T ++L+ N I +DGA A+ +AL  N+ +A   LN  N
Sbjct: 716 ---------------NQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNN 756



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 30/363 (8%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +++S  + G+EG   +++++  N T   +  + N I   G KA    LQS   L+
Sbjct: 408 KTITHLNLSFNSIGNEGAEEISKAILVNTTLINLDLSQNCIGLKGSKALGQALQSTTILQ 467

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR---- 277
           T+NLS N  G +G+  + + +  N+ +  +  S  DL ++ +K + E ++ +  L     
Sbjct: 468 TINLSKNRFGAKGIDFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEAIRKHPCLASVNL 527

Query: 278 ------------------------VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
                                    L+++ N  +Y G   LA AL    +I  L L G+ 
Sbjct: 528 CDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYKGLKPLAAALSMCQSITYLDLTGDS 587

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNSIS 372
            G  GA  L   L  N S+  L L  N+IG  G  +L + L + +  L +LD+  N  I 
Sbjct: 588 IGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATSLGNALKTNRS-LEILDLSINPEIG 646

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA H+AE +   K +  +++  N +G  GA+++ +AL+QN TIT + L GN I  +G 
Sbjct: 647 HLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGEALRQNSTITDLQLRGNEIGDEGC 706

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            A++  LK N  IT L+L+ N I  DGAKAL E L ++ ++ +++L    I   G +F+ 
Sbjct: 707 RALSDSLKQNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMK 766

Query: 493 DML 495
           ++L
Sbjct: 767 ELL 769



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 31/310 (10%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  +S + + E  ++    +SV++       E + +++E +  +QT   +  + N     
Sbjct: 504 LNEKSSKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYK 563

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G+K     L    ++  L+L+G+ IGD+G   L D L  N  +  L L+  ++   GA +
Sbjct: 564 GLKPLAAALSMCQSITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATS 623

Query: 266 IAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           +   LK N  L +L+L+ N  I + G   +AE L  N  I  L +  N  G +GA  L +
Sbjct: 624 LGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGE 683

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N ++ +L L GN IGDEG RAL                             ++ +K
Sbjct: 684 ALRQNSTITDLQLRGNEIGDEGCRAL-----------------------------SDSLK 714

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             +S+  +NL  N I ++GA+ + +AL  N+++ +I L  NNI+++G   +  +L   S 
Sbjct: 715 QNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMKELLL-RSY 773

Query: 445 ITSLDLAYNP 454
           + +LD  + P
Sbjct: 774 LVNLDSYFYP 783



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 16/202 (7%)

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           +S +  +L  N+ IT+L+L+ N IG   A  + E L  +  I  L L +  IG  GAE +
Sbjct: 369 SSFVRMLLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEI 428

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
           +  +  N T+  LDL  N      C G  G      A+ S   +   +L  N   GAK +
Sbjct: 429 SKAILVNTTLINLDLSQN------CIGLKGSKALGQALQSTTILQTINLSKNRF-GAKGI 481

Query: 552 AQSFKVV--NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT----KF 605
               + +  N +LT +D + N++ +  +  + +A++ +  +A  S+NL +  L+    K+
Sbjct: 482 DFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEAIRKHPCLA--SVNLCDTKLSPESMKY 539

Query: 606 GQSALTDAKDLVY-EMSEKEVN 626
               +  ++ + Y +MS  E N
Sbjct: 540 ISEGIQASQTIAYLDMSRNEFN 561


>gi|363739684|ref|XP_003642205.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Gallus gallus]
          Length = 1097

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 208/400 (52%), Gaps = 36/400 (9%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            L  N +L  L+L  N IG  G K L D L  N  +  L L    +++EGA A+AE L  N
Sbjct: 722  LMVNRSLTVLDLRSNSIGPSGAKALADALKKNQVLLFLSLQHNVIKEEGAAALAEALLTN 781

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
              L  L L  N I   G   LAEAL +N +++ L L+ N  G  G+ ALA+ L+ N SL+
Sbjct: 782  RRLITLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNHSLQ 841

Query: 334  ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
             L L  NSI + G+ AL + L S KG L  L++  NSIS +G   +A  ++   +L  ++
Sbjct: 842  SLDLQSNSISNTGVSALTAALCSNKG-LTDLNLRENSISKEGGPAIAHALRTNCTLRKLD 900

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N + DEG + IA A+K+NR +T++ L  N I ++ A A+A+ L+ N  + SLDL  N
Sbjct: 901  LAANLLHDEGGKAIALAMKENRALTSLHLQWNFIQTQAAVALAQALQSNDSLASLDLQEN 960

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             IG +G  AL+  LK +  +  L L    I A+GA+ +A+ L  NN++ +LDLR N +  
Sbjct: 961  AIGDEGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSIS- 1019

Query: 514  EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                           + GAK +A + K VN +L  ++L  N + 
Sbjct: 1020 -------------------------------VAGAKAMANALK-VNRSLRWLNLQENSLG 1047

Query: 574  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             DGA  IA AL+ N    +T +NL  N + + G   ++DA
Sbjct: 1048 MDGAICIATALRGNH--GLTYVNLQGNRIGQSGAKMISDA 1085



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 178/366 (48%), Gaps = 29/366 (7%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ + +D+   + G  G   LA++L  NQ    +S   N I   G  A    L +N  L 
Sbjct: 726  RSLTVLDLRSNSIGPSGAKALADALKKNQVLLFLSLQHNVIKEEGAAALAEALLTNRRLI 785

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL+L  N IG  G + L + L  N  ++ L LSS  + D G+ A+AE LK N  L+ L+L
Sbjct: 786  TLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNHSLQSLDL 845

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G ++L  AL  N  +  L+L  N     G  A+A  L  N +LR+L L  N 
Sbjct: 846  QSNSISNTGVSALTAALCSNKGLTDLNLRENSISKEGGPAIAHALRTNCTLRKLDLAANL 905

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG +A+   +   +  L  L +  N I  + A  +A+ +++  SL  ++L  N IGD
Sbjct: 906  LHDEGGKAIALAMKENRA-LTSLHLQWNFIQTQAAVALAQALQSNDSLASLDLQENAIGD 964

Query: 402  EGAEKIADALKQNRTIT----------------------------TIDLGGNNIHSKGAS 433
            EG   +A ALK N T+                              +DL GN+I   GA 
Sbjct: 965  EGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVAGAK 1024

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            A+A  LK N  +  L+L  N +G DGA  ++  L+ +  +  + L   +IG SGA+ ++D
Sbjct: 1025 AMANALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQGNRIGQSGAKMISD 1084

Query: 494  MLRYNN 499
             +R N+
Sbjct: 1085 AIRTNS 1090



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 173/396 (43%), Gaps = 67/396 (16%)

Query: 261 EGAKAIAELLKNNSILRVLELNN---------------------NMIDYSGFTSLAEALL 299
           E AKA+ E +KN S+  +L   N                     N + Y+   SL   LL
Sbjct: 604 EIAKAVEEAMKNESLAGMLTPVNCSALAYLLQVSDVCVEETNLSNCLTYNICKSLLPQLL 663

Query: 300 ENSTIRSLHLNGN---------YGGAL--------------------------GANALAK 324
                 SL L+ N          G  L                          G  ALA+
Sbjct: 664 ---FCHSLRLDNNQFKDNVMELLGSMLSVKDCQIQRLRXDLAQAECTLPEAEPGRGALAR 720

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N+SL  L L  NSIG  G +AL   L  +   L  L + +N I  +GA  +AE + 
Sbjct: 721 SLMVNRSLTVLDLRSNSIGPSGAKALADAL-KKNQVLLFLSLQHNVIKEEGAAALAEALL 779

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             + L+ ++L  N IG  GA K+A+AL QN ++  + L  N++   G+ A+A  LK N  
Sbjct: 780 TNRRLITLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNHS 839

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           + SLDL  N I   G  AL+  L  +  +  L L    I   G   +A  LR N T+  L
Sbjct: 840 LQSLDLQSNSISNTGVSALTAALCSNKGLTDLNLRENSISKEGGPAIAHALRTNCTLRKL 899

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALT 563
           DL AN L DE   G   ++    A+   + +    L  N++Q    +A +  +  N++L 
Sbjct: 900 DLAANLLHDE---GGKAIAL---AMKENRALTSLHLQWNFIQTQAAVALAQALQSNDSLA 953

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           S+DL  N I D+G  A+A ALK N  +A   L +A+
Sbjct: 954 SLDLQENAIGDEGMAALAAALKVNTTLADLHLQVAS 989


>gi|452819223|gb|EME26288.1| FBox-LRR protein [Galdieria sulphuraria]
          Length = 988

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 188/356 (52%), Gaps = 27/356 (7%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S ++   EG  +L+E+L  N T  E+          G++     L+ N  L  LN+ 
Sbjct: 304 MNLSLKSISSEGAQYLSEALKVNNTLTELDIRK------GVQYLSEALKVNNTLTKLNIG 357

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE--------LLKNNSILRV 278
            N I  EG + L + L  N  + +L + S  +  EG + +          + K N+ L  
Sbjct: 358 DNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALEGVQYLXRSAIFNFEAIEKVNNTLTK 417

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L +  N I   G   L+EAL  N+T+  L++  N   + GA  L++ L+ N +L EL ++
Sbjct: 418 LNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIASEGAQYLSEALKVNNTLTELDIN 477

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N+             ++R   L  L+IG N++ ++GA +++E +K   +L  +++  N 
Sbjct: 478 NNN-------------NARIKTLTKLNIGYNNVDSEGAQYLSEALKVNNTLTKLDIRSNK 524

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I  EGA+ +++ALK N T+T +D+  NNI S+GA  ++  LK N+ +T LD+ YN I ++
Sbjct: 525 IESEGAQYLSEALKVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGYNNIASE 584

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           G + LSE LK +  +  L +    I + GA+++++ L+ NNT++ L++  N +  E
Sbjct: 585 GVQYLSEALKVNNTLTKLNIRRNNIDSEGAQYLSEALKVNNTLTKLNISGNAIPSE 640



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 189/374 (50%), Gaps = 64/374 (17%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            + LS   +  EGA+ ++E LK N+ L  L++        G   L+EAL  N+T+  L++
Sbjct: 303 EMNLSLKSISSEGAQYLSEALKVNNTLTELDIR------KGVQYLSEALKVNNTLTKLNI 356

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL-------MSGLSSRKGKLA 362
             N   + GA  L++ L+ N +L +L +  N I  EG++ L          +      L 
Sbjct: 357 GDNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALEGVQYLXRSAIFNFEAIEKVNNTLT 416

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L+I  N+I+++GA +++E +K   +L  +N+  N+I  EGA+ +++ALK N T+T +D+
Sbjct: 417 KLNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIASEGAQYLSEALKVNNTLTELDI 476

Query: 423 ----------------GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
                           G NN+ S+GA  ++  LK N+ +T LD+  N I ++GA+ LSE 
Sbjct: 477 NNNNNARIKTLTKLNIGYNNVDSEGAQYLSEALKVNNTLTKLDIRSNKIESEGAQYLSEA 536

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           LK +  +  L + +  I + GA+++++ L+ NNT++ LD+  N +  E            
Sbjct: 537 LKVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGYNNIASE------------ 584

Query: 527 SAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
                               G + L+++ KV N  LT +++  N I  +GA  +++ALK 
Sbjct: 585 --------------------GVQYLSEALKV-NNTLTKLNIRRNNIDSEGAQYLSEALKV 623

Query: 587 NEDVAVTSLNLANN 600
           N    +T LN++ N
Sbjct: 624 NN--TLTKLNISGN 635



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 169/326 (51%), Gaps = 27/326 (8%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           R+  Q L+E  K     + +++   N   EG  +L+E+L  N T  ++   +N I   G+
Sbjct: 335 RKGVQYLSEALKVNNTLTKLNIGDNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALEGV 394

Query: 208 KA--------FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +         F+ + + N  L  LN+  N I  EG + L + L  N  + +L + S ++ 
Sbjct: 395 QYLXRSAIFNFEAIEKVNNTLTKLNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIA 454

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL-HLNGNYGG--A 316
            EGA+ ++E LK N+ L  L++NNN                N+ I++L  LN  Y    +
Sbjct: 455 SEGAQYLSEALKVNNTLTELDINNN---------------NNARIKTLTKLNIGYNNVDS 499

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            GA  L++ L+ N +L +L +  N I  EG + L   L      L  LDI  N+I ++GA
Sbjct: 500 EGAQYLSEALKVNNTLTKLDIRSNKIESEGAQYLSEALKV-NNTLTKLDISYNNIDSEGA 558

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            +++E +K   +L  +++  N+I  EG + +++ALK N T+T +++  NNI S+GA  ++
Sbjct: 559 QYLSEALKVNNTLTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIRRNNIDSEGAQYLS 618

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKA 462
             LK N+ +T L+++ N I ++  +A
Sbjct: 619 EALKVNNTLTKLNISGNAIPSEDIRA 644



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 48/284 (16%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +++   N   EG  +L+E+L  N T  +++  +N I + G +     L+ N  L  
Sbjct: 414 TLTKLNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIASEGAQYLSEALKVNNTLTE 473

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVE---RLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+++ N               +NA ++   +L +   ++  EGA+ ++E LK N+ L  L
Sbjct: 474 LDINNN---------------NNARIKTLTKLNIGYNNVDSEGAQYLSEALKVNNTLTKL 518

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++ +N I+  G   L+EAL  N+T+  L ++ N   + GA  L++ L+ N +L +L +  
Sbjct: 519 DIRSNKIESEGAQYLSEALKVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGY 578

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N+I  EG++ L   L             NN+++                   +N+  N+I
Sbjct: 579 NNIASEGVQYLSEALKV-----------NNTLTK------------------LNIRRNNI 609

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-IARVLKDN 442
             EGA+ +++ALK N T+T +++ GN I S+   A I   LK N
Sbjct: 610 DSEGAQYLSEALKVNNTLTKLNISGNAIPSEDIRAKIHPYLKRN 653



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 107/208 (51%), Gaps = 35/208 (16%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           ++L   +I S+GA  ++  LK N+ +T LD+        G + LSE LK +  +  L +G
Sbjct: 304 MNLSLKSISSEGAQYLSEALKVNNTLTELDIR------KGVQYLSEALKVNNTLTKLNIG 357

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF-HSAIYSLKHMLFY 538
              I + GA+++++ L+ NNT++ LD+R+N +  E      G+ +   SAI++       
Sbjct: 358 DNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALE------GVQYLXRSAIFNF------ 405

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                         ++ + VN  LT +++ +N I  +GA  +++ALK N    +T LN+ 
Sbjct: 406 --------------EAIEKVNNTLTKLNIRYNNIASEGAQYLSEALKVNN--TLTKLNIR 449

Query: 599 NNFLTKFGQSALTDAKDLVYEMSEKEVN 626
           +N +   G   L++A  +   ++E ++N
Sbjct: 450 SNNIASEGAQYLSEALKVNNTLTELDIN 477



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           + K+  E  Q L+E  K     + +D+S  N   EG  +L+E+L  N T  ++    N I
Sbjct: 522 SNKIESEGAQYLSEALKVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGYNNI 581

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
            + G++     L+ N  L  LN+  N I  EG + L + L  N  + +L +S   +  E 
Sbjct: 582 ASEGVQYLSEALKVNNTLTKLNIRRNNIDSEGAQYLSEALKVNNTLTKLNISGNAIPSED 641

Query: 263 AKA-IAELLKNN 273
            +A I   LK N
Sbjct: 642 IRAKIHPYLKRN 653


>gi|320169702|gb|EFW46601.1| hypothetical protein CAOG_04559 [Capsaspora owczarzaki ATCC 30864]
          Length = 391

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 173/340 (50%), Gaps = 15/340 (4%)

Query: 154 LNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +NE  +EL      A   +D+S           +AE+L  N T   +    N I   G++
Sbjct: 4   MNELQRELYDIVKNATEELDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDLGVQ 63

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L  L+L  N IGD G K L + L  +  +  L L++  + + GA+AI E
Sbjct: 64  AIAEALKVNTTLTYLDLDSNQIGDAGAKVLAEALKGHTTLTGLGLNTSQIGEVGAQAICE 123

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK NS L +L+L+ N I  +G  ++A+AL  N+T+  L+L+GN  G  GA A+A+ L+ 
Sbjct: 124 ALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNTTLTWLNLDGNQIGDAGAQAIAQALKV 183

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L++L L  N IGD G +A+   L   K +L  L +  N I   GA  +A  +K   +
Sbjct: 184 NSTLKKLFLDANQIGDAGAQAIGEALKVNK-RLIDLRLSENHIGDAGANTIAAALKVNTT 242

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L W+NL  N IG+ GAE IA+ALK N T+  + L  N I   GA  +A  L+ N+ +T L
Sbjct: 243 LTWLNLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALEVNTTMTKL 302

Query: 449 DLAYNPIGADGAKALSEV--------LKFHGNINTLKLGW 480
            L  N +   G  AL +V        L F   I  L   W
Sbjct: 303 HLDRNCMDY-GRSALLDVREDNCRLELTFDDQIGCLAFIW 341



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 160/317 (50%), Gaps = 29/317 (9%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           EE+  +   I  A  +A    L+ N  L  L L  N IGD GV+ + + L  N  +  L 
Sbjct: 20  EELDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDLGVQAIAEALKVNTTLTYLD 79

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L S  + D GAK +AE LK ++ L  L LN + I   G  ++ EAL  NST+  L L+ N
Sbjct: 80  LDSNQIGDAGAKVLAEALKGHTTLTGLGLNTSQIGEVGAQAICEALKVNSTLTMLDLDAN 139

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA A+A+ L+ N +L  L+L GN IGD G +A                       
Sbjct: 140 QIGDAGAQAIAQALKVNTTLTWLNLDGNQIGDAGAQA----------------------- 176

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
                 +A+ +K   +L  + L  N IGD GA+ I +ALK N+ +  + L  N+I   GA
Sbjct: 177 ------IAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLRLSENHIGDAGA 230

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           + IA  LK N+ +T L+L+ N IG  GA+A++E LK +  +  L L   +IG  GA  +A
Sbjct: 231 NTIAAALKVNTTLTWLNLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELA 290

Query: 493 DMLRYNNTISILDLRAN 509
           D L  N T++ L L  N
Sbjct: 291 DALEVNTTMTKLHLDRN 307



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 2/273 (0%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           +V NA  E L LS   +    A+AIAE LK N+ L  L+L  N I   G  ++AEAL  N
Sbjct: 14  IVKNA-TEELDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDLGVQAIAEALKVN 72

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L L+ N  G  GA  LA+ L+G+ +L  L L+ + IG+ G +A+   L      L
Sbjct: 73  TTLTYLDLDSNQIGDAGAKVLAEALKGHTTLTGLGLNTSQIGEVGAQAICEALKVNS-TL 131

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
            +LD+  N I   GA  +A+ +K   +L W+NL  N IGD GA+ IA ALK N T+  + 
Sbjct: 132 TMLDLDANQIGDAGAQAIAQALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLF 191

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I   GA AI   LK N  +  L L+ N IG  GA  ++  LK +  +  L L   
Sbjct: 192 LDANQIGDAGAQAIGEALKVNKRLIDLRLSENHIGDAGANTIAAALKVNTTLTWLNLSEN 251

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           QIG  GAE +A+ L+ N T+++L L  N + D+
Sbjct: 252 QIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDD 284



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 149/297 (50%), Gaps = 36/297 (12%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L  L L  N IGD G++A+   L      L  LD+ +N I   GA  +AE +K 
Sbjct: 41  LKVNTTLTWLKLEKNQIGDLGVQAIAEALKVNT-TLTYLDLDSNQIGDAGAKVLAEALKG 99

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L  + L  + IG+ GA+ I +ALK N T+T +DL  N I   GA AIA+ LK N+ +
Sbjct: 100 HTTLTGLGLNTSQIGEVGAQAICEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNTTL 159

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T L+L  N IG  GA+A+++ LK +  +  L L   QIG +GA+ + + L+ N  +  L 
Sbjct: 160 TWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLR 219

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSI 565
           L  N + D                                 GA  +A + KV N  LT +
Sbjct: 220 LSENHIGD--------------------------------AGANTIAAALKV-NTTLTWL 246

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 622
           +L+ N+I + GA AIA+ALK N  +AV  L L  N +   G   L DA ++   M++
Sbjct: 247 NLSENQIGNVGAEAIAEALKVNTTLAV--LGLHTNEIGDDGACELADALEVNTTMTK 301



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 107/221 (48%), Gaps = 4/221 (1%)

Query: 135 GTNLLSGF---TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT 191
           G   L+G    T ++     Q + E  K     + +D+     GD G   +A++L  N T
Sbjct: 99  GHTTLTGLGLNTSQIGEVGAQAICEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNTT 158

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
              ++   N I  AG +A    L+ N  LK L L  N IGD G + + + L  N  +  L
Sbjct: 159 LTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDL 218

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           +LS   + D GA  IA  LK N+ L  L L+ N I   G  ++AEAL  N+T+  L L+ 
Sbjct: 219 RLSENHIGDAGANTIAAALKVNTTLTWLNLSENQIGNVGAEAIAEALKVNTTLAVLGLHT 278

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           N  G  GA  LA  LE N ++ +LHL  N + D G  AL+ 
Sbjct: 279 NEIGDDGACELADALEVNTTMTKLHLDRNCM-DYGRSALLD 318



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 15/171 (8%)

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            LDL+   I    A+A++E LK +  +  LKL   QIG  G + +A+ L+ N T++ LDL
Sbjct: 21  ELDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDLGVQAIAEALKVNTTLTYLDL 80

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ----GAKCLAQSFKVVNEAL 562
            +N + D       G      A+    H     L +N  Q    GA+ + ++ KV N  L
Sbjct: 81  DSNQIGDA------GAKVLAEALKG--HTTLTGLGLNTSQIGEVGAQAICEALKV-NSTL 131

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           T +DL  N+I D GA AIAQALK N    +T LNL  N +   G  A+  A
Sbjct: 132 TMLDLDANQIGDAGAQAIAQALKVN--TTLTWLNLDGNQIGDAGAQAIAQA 180


>gi|406943494|gb|EKD75477.1| hypothetical protein ACD_44C00117G0002 [uncultured bacterium]
          Length = 1248

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 172/334 (51%), Gaps = 3/334 (0%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+  +N  D     L+E+L  N TA  V    N I   G KA  G L+ N ++K L+L 
Sbjct: 683  LDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLDLD 742

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD G + L ++L  N  +  L L    + + G +A+AE LK N  L+ L L NN +
Sbjct: 743  HNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEALKVNKTLQELNLGNNYV 802

Query: 287  DYSGFTSL-AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
              +  +SL AEAL +N+T++ L+LN +    LGA+ L + L  N +L EL L  N +GD 
Sbjct: 803  MDTKTSSLFAEALKQNNTLQKLNLNKSGLHELGAHILTEALSTNHTLTELSLRRNGLGDI 862

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            G   +++ +      L  LD+ +N IS   A  +A  +    +L  +NL  N +    A 
Sbjct: 863  G-GLIIAKVLQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQELNLANNFLNTATAT 921

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             IADALK N+T+  +DL    I+      IA  LK N  +  L+LA N IG+   +A++E
Sbjct: 922  SIADALKTNQTLQKLDLENTRINLGDVIIIADALKINHTLQELNLANNKIGSFSIRAIAE 981

Query: 466  VLKFHGNINTLKLGWCQI-GASGAEFVADMLRYN 498
             LK +  +  L L   Q+   +    + D+L+ N
Sbjct: 982  TLKTNYTLQKLNLESTQLTDKTLLSPIEDLLKRN 1015



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 13/268 (4%)

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N  +KT++   + + D G+K +  IL  N  +    L S  + DE A+ IAE
Sbjct: 146 ALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKVNQTITTFYLDSNSISDEDARTIAE 205

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            +K N  +  L +  N I  +G  ++AEAL EN TI+++H + N     G     + L+ 
Sbjct: 206 AIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQTFTEALKM 265

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGL----SSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           N+S+  LHL  +S  D  I+A+   L    S +  +L+   +GN  + A     +AE ++
Sbjct: 266 NQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLGNAGMQA-----IAEILR 320

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           N  S+  + L +  I D  A+ IA+AL  N+T+ T+DL  N+I       +A  L+ N  
Sbjct: 321 NNDSITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNSIGETALVHLAVELETNRT 380

Query: 445 ITSLDL----AYNPIGADGAKALSEVLK 468
           +T+L+L    +Y P   D  + + ++L+
Sbjct: 381 LTNLNLKPPYSYTPSYRDALEKVKKLLE 408



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 3/265 (1%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS--LAEALLENSTIRS 306
           E + L +  L+D     I  + K +S +  L LN   I+ +   +  L +AL +N  I++
Sbjct: 100 ETIILENEKLKDNFQYLIRIIRKKHSKVTTLFLNPGSIEINDTIAHALTDALCDNPHIKT 159

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           +H   +     G  A+AK L+ N+++   +L  NSI DE  R +   + + +  +  L I
Sbjct: 160 IHFEHHSMKDTGMKAIAKILKVNQTITTFYLDSNSISDEDARTIAEAIKTNQT-ITTLYI 218

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
             NSIS  G   +AE +K  +++  ++   N I D G +   +ALK N++ITT+ L  ++
Sbjct: 219 KGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQTFTEALKMNQSITTLHLEHSS 278

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
                  AIA  LK N  I +L L+Y  +G  G +A++E+L+ + +I TL L    I  +
Sbjct: 279 RSDMDIQAIAETLKVNHSIKTLRLSYTSLGNAGMQAIAEILRNNDSITTLYLELKSISDT 338

Query: 487 GAEFVADMLRYNNTISILDLRANGL 511
            A+ +A+ L  N T+  LDL  N +
Sbjct: 339 DAKTIAEALSINKTLKTLDLSKNSI 363



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 144/289 (49%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    I D     L + L  N     + L    +  +GAKA+A  LK N  ++VL+L+
Sbjct: 683 LDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLDLD 742

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I  +G  +LAE L  N +I +L+L  N     G  ALA+ L+ NK+L+EL+L  N +
Sbjct: 743 HNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEALKVNKTLQELNLGNNYV 802

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D    +L +    +   L  L++  + +   GA  + E +    +L  ++L  N +GD 
Sbjct: 803 MDTKTSSLFAEALKQNNTLQKLNLNKSGLHELGAHILTEALSTNHTLTELSLRRNGLGDI 862

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G   IA  L+ N T+  +DL  N I    A +IAR L  N  +  L+LA N +    A +
Sbjct: 863 GGLIIAKVLQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQELNLANNFLNTATATS 922

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           +++ LK +  +  L L   +I       +AD L+ N+T+  L+L  N +
Sbjct: 923 IADALKTNQTLQKLDLENTRINLGDVIIIADALKINHTLQELNLANNKI 971



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 29/285 (10%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN     I D     L D L DN  ++ +      ++D G KAIA++LK N  +    L+
Sbjct: 132 LNPGSIEINDTIAHALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKVNQTITTFYLD 191

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I      ++AEA+  N TI +L++ GN     G  A+A+ L+ N++++ +H   NSI
Sbjct: 192 SNSISDEDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSI 251

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D G++                                E +K  +S+  ++L  +   D 
Sbjct: 252 SDAGMQTF-----------------------------TEALKMNQSITTLHLEHSSRSDM 282

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + IA+ LK N +I T+ L   ++ + G  AIA +L++N  IT+L L    I    AK 
Sbjct: 283 DIQAIAETLKVNHSIKTLRLSYTSLGNAGMQAIAEILRNNDSITTLYLELKSISDTDAKT 342

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           ++E L  +  + TL L    IG +    +A  L  N T++ L+L+
Sbjct: 343 IAEALSINKTLKTLDLSKNSIGETALVHLAVELETNRTLTNLNLK 387



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 37/300 (12%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A+AL   L  N  ++ +H   +S+ D G++A+   L   +  +    + +NSIS + A  
Sbjct: 144 AHALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKVNQT-ITTFYLDSNSISDEDART 202

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE IK  +++  + +  N I D G + IA+ALK+NRTI T+    N+I   G       
Sbjct: 203 IAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQTFTEA 262

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N  IT+L L ++       +A++E LK + +I TL+L +  +G +G + +A++LR N
Sbjct: 263 LKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLGNAGMQAIAEILRNN 322

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
           ++I+ L L    + D                                  AK +A++   +
Sbjct: 323 DSITTLYLELKSISD--------------------------------TDAKTIAEALS-I 349

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF-LTKFGQSALTDAKDLV 617
           N+ L ++DL+ N I +     +A  L+ N    +T+LNL   +  T   + AL   K L+
Sbjct: 350 NKTLKTLDLSKNSIGETALVHLAVELETNR--TLTNLNLKPPYSYTPSYRDALEKVKKLL 407



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 12/255 (4%)

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
            +LD+   +I    A  ++E +K   + + + L  N IG +GA+ +A ALK N+++  +D
Sbjct: 681 VILDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLD 740

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N+I   GA A+A VL  N  IT+L L +N I   G +AL+E LK +  +  L LG  
Sbjct: 741 LDHNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEALKVNKTLQELNLGNN 800

Query: 482 QI-GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
            +     +   A+ L+ NNT+  L+L  +GL +    G + L+   S  ++L  +   SL
Sbjct: 801 YVMDTKTSSLFAEALKQNNTLQKLNLNKSGLHE---LGAHILTEALSTNHTLTEL---SL 854

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
             N L   G   +A+  + VN  L  +DL+ N I D  A +IA+ L  N    +  LNLA
Sbjct: 855 RRNGLGDIGGLIIAKVLQ-VNSTLKKLDLSDNIISDVSAISIARTLITNH--TLQELNLA 911

Query: 599 NNFLTKFGQSALTDA 613
           NNFL     +++ DA
Sbjct: 912 NNFLNTATATSIADA 926



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 45/341 (13%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +L+L    ID +   +L+E L  N T  ++ L  N  G  GA ALA  L+ N+S++ L L
Sbjct: 682 ILDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLDL 741

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             NSIGD G  AL   L++           N+SI+         Y+K+           N
Sbjct: 742 DHNSIGDAGAEALAEVLTT-----------NDSITTL-------YLKH-----------N 772

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNI-HSKGASAIARVLKDNSVITSLDLAYNPIG 456
            I + G + +A+ALK N+T+  ++LG N +  +K +S  A  LK N+ +  L+L  + + 
Sbjct: 773 LINNGGVQALAEALKVNKTLQELNLGNNYVMDTKTSSLFAEALKQNNTLQKLNLNKSGLH 832

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             GA  L+E L  +  +  L L    +G  G   +A +L+ N+T+  LD     L D + 
Sbjct: 833 ELGAHILTEALSTNHTLTELSLRRNGLGDIGGLIIAKVLQVNSTLKKLD-----LSDNII 887

Query: 517 SGCNGLSFFHSAI--YSLKHMLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEI 572
           S  + +S   + I  ++L+ +   +L  N+L  A    +A + K  N+ L  +DL    I
Sbjct: 888 SDVSAISIARTLITNHTLQEL---NLANNFLNTATATSIADALK-TNQTLQKLDLENTRI 943

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
                  IA ALK N    +  LNLANN +  F   A+ + 
Sbjct: 944 NLGDVIIIADALKINH--TLQELNLANNKIGSFSIRAIAET 982



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 103/189 (54%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  +T+ E  K  +  +++ + G +  D G+  +AE+L  N+T + V F  N I+ AG++
Sbjct: 198 EDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQ 257

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            F   L+ N ++ TL+L  +   D  ++ + + L  N  ++ L+LS   L + G +AIAE
Sbjct: 258 TFTEALKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLGNAGMQAIAE 317

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +L+NN  +  L L    I  +   ++AEAL  N T+++L L+ N  G      LA  LE 
Sbjct: 318 ILRNNDSITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNSIGETALVHLAVELET 377

Query: 329 NKSLRELHL 337
           N++L  L+L
Sbjct: 378 NRTLTNLNL 386



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 29/259 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++     +  D G+  +A+ L  NQT       +N I+    +     +++N  + TL
Sbjct: 157 IKTIHFEHHSMKDTGMKAIAKILKVNQTITTFYLDSNSISDEDARTIAEAIKTNQTITTL 216

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            + GN I D G+                            +AIAE LK N  ++ +  +N
Sbjct: 217 YIKGNSISDTGI----------------------------QAIAEALKENRTIKTVHFDN 248

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  +  EAL  N +I +LHL  +    +   A+A+ L+ N S++ L L   S+G
Sbjct: 249 NSISDAGMQTFTEALKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLG 308

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G++A+   L +    +  L +   SIS   A  +AE +   K+L  ++L  N IG+  
Sbjct: 309 NAGMQAIAEILRNNDS-ITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNSIGETA 367

Query: 404 AEKIADALKQNRTITTIDL 422
              +A  L+ NRT+T ++L
Sbjct: 368 LVHLAVELETNRTLTNLNL 386



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 94/197 (47%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  ++  +   +  DE    +AE++  NQT   +    N I+  GI+A    L+ N  +K
Sbjct: 183 QTITTFYLDSNSISDEDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIK 242

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           T++   N I D G++   + L  N  +  L L      D   +AIAE LK N  ++ L L
Sbjct: 243 TVHFDNNSISDAGMQTFTEALKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRL 302

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +   +  +G  ++AE L  N +I +L+L         A  +A+ L  NK+L+ L L  NS
Sbjct: 303 SYTSLGNAGMQAIAEILRNNDSITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNS 362

Query: 342 IGDEGIRALMSGLSSRK 358
           IG+  +  L   L + +
Sbjct: 363 IGETALVHLAVELETNR 379



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 3/204 (1%)

Query: 157  FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            FA+ L+       ++++     + G   L E+L  N T  E+S   NG+   G      V
Sbjct: 811  FAEALKQNNTLQKLNLNKSGLHELGAHILTEALSTNHTLTELSLRRNGLGDIGGLIIAKV 870

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            LQ N  LK L+LS N I D     +   L+ N  ++ L L++  L    A +IA+ LK N
Sbjct: 871  LQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQELNLANNFLNTATATSIADALKTN 930

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
              L+ L+L N  I+      +A+AL  N T++ L+L  N  G+    A+A+ L+ N +L+
Sbjct: 931  QTLQKLDLENTRINLGDVIIIADALKINHTLQELNLANNKIGSFSIRAIAETLKTNYTLQ 990

Query: 334  ELHLHGNSIGDEGIRALMSGLSSR 357
            +L+L    + D+ + + +  L  R
Sbjct: 991  KLNLESTQLTDKTLLSPIEDLLKR 1014



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  KE R   +V     +  D G+    E+L  NQ+   +    +  +   I+A  
Sbjct: 229 QAIAEALKENRTIKTVHFDNNSISDAGMQTFTEALKMNQSITTLHLEHSSRSDMDIQAIA 288

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N ++KTL LS   +G+ G++ + +IL +N  +  L L    + D  AK IAE L 
Sbjct: 289 ETLKVNHSIKTLRLSYTSLGNAGMQAIAEILRNNDSITTLYLELKSISDTDAKTIAEALS 348

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
            N  L+ L+L+ N I  +    LA  L  N T+ +L+L   Y 
Sbjct: 349 INKTLKTLDLSKNSIGETALVHLAVELETNRTLTNLNLKPPYS 391



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 19/207 (9%)

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +I D  A  + DAL  N  I TI    +++   G  AIA++LK N  IT+  L  N I  
Sbjct: 138 EINDTIAHALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKVNQTITTFYLDSNSISD 197

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
           + A+ ++E +K +  I TL +    I  +G + +A+ L+ N TI  +    N + D    
Sbjct: 198 EDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDA--- 254

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGA-------KCLAQSFKVVNEALTSIDLAFN 570
              G+  F  A+      +  S+   +L+ +       + +A++ K VN ++ ++ L++ 
Sbjct: 255 ---GMQTFTEAL-----KMNQSITTLHLEHSSRSDMDIQAIAETLK-VNHSIKTLRLSYT 305

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNL 597
            + + G  AIA+ L+ N+ +    L L
Sbjct: 306 SLGNAGMQAIAEILRNNDSITTLYLEL 332



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 7/186 (3%)

Query: 412 KQNRTITTIDL--GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           K++  +TT+ L  G   I+   A A+   L DN  I ++   ++ +   G KA++++LK 
Sbjct: 122 KKHSKVTTLFLNPGSIEINDTIAHALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKV 181

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI 529
           +  I T  L    I    A  +A+ ++ N TI+ L ++ N + D   +G   ++      
Sbjct: 182 NQTITTFYLDSNSISDEDARTIAEAIKTNQTITTLYIKGNSISD---TGIQAIAEALKEN 238

Query: 530 YSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 589
            ++K + F +  I+   G +   ++ K +N+++T++ L  +   D    AIA+ LK N  
Sbjct: 239 RTIKTVHFDNNSISD-AGMQTFTEALK-MNQSITTLHLEHSSRSDMDIQAIAETLKVNHS 296

Query: 590 VAVTSL 595
           +    L
Sbjct: 297 IKTLRL 302


>gi|344237526|gb|EGV93629.1| Protein NLRC3 [Cricetulus griseus]
          Length = 975

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 174/355 (49%), Gaps = 27/355 (7%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           S+  L     +L    S+ +    F D  +  L   L G +   + +S   N I   G K
Sbjct: 622 SQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIQNISLTENQIGNKGAK 681

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  ++D G   +AE
Sbjct: 682 ALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAE 741

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L +N  + +L+L  N+I  +G   +A+AL +N +++ L  + N  G  GA ALA+ L+G
Sbjct: 742 ALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALKG 801

Query: 329 NKSLREL-------------------------HLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           N+ L  L                          L  N+I + G+  LM  L   +  L+ 
Sbjct: 802 NQGLENLDSSLDQTAVSRTWDSHISSALSFIRSLQSNAISNTGVAVLMRALCVNQ-TLSS 860

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L++  N I A  A  + + ++  ++L  ++L +  IG +GA+ + +AL  NRT+  +DL 
Sbjct: 861 LNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIGTQGAQALGEALAVNRTLEILDLR 920

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           GN+I   GA A+A  LK NS +  L+L  NPIG  GA+ +SE +K +    T+++
Sbjct: 921 GNDIGVAGAKALANALKLNSSLRRLNLQGNPIGESGARMISEAIKTNAPTCTVEM 975



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           ++ ++L+ N IG++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 665 IQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSL 724

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L +NMI  +G   +AEAL+ N TI  L L  N  G  GA  +A  L+ NKSL+EL    
Sbjct: 725 GLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSS 784

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLD--IGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           N+IGD G  AL   L   +G L  LD  +   ++S     H++  +   +S     L  N
Sbjct: 785 NTIGDGGAMALAEALKGNQG-LENLDSSLDQTAVSRTWDSHISSALSFIRS-----LQSN 838

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            I + G   +  AL  N+T+++++L  N I +  A A+ + L+ N  +T+LDL    IG 
Sbjct: 839 AISNTGVAVLMRALCVNQTLSSLNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIGT 898

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            GA+AL E L  +  +  L L    IG +GA+ +A+ L+ N+++  L+L+ N +
Sbjct: 899 QGAQALGEALAVNRTLEILDLRGNDIGVAGAKALANALKLNSSLRRLNLQGNPI 952



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 4/274 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +  + L +  K+ R  +S+ +      D G+  +AE+L  NQT   +    N I   G +
Sbjct: 706 QGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQ 765

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+ N +LK L  S N IGD G   L + L  N G+E L  SS+D         + 
Sbjct: 766 RMADALKQNKSLKELMFSSNTIGDGGAMALAEALKGNQGLENLD-SSLDQTAVSRTWDSH 824

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +    S +R L+  +N I  +G   L  AL  N T+ SL+L  N+  A  A AL + L+ 
Sbjct: 825 ISSALSFIRSLQ--SNAISNTGVAVLMRALCVNQTLSSLNLQWNFIQAGAARALGQALQL 882

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N++L  L L   SIG +G +AL   L+  +  L +LD+  N I   GA  +A  +K   S
Sbjct: 883 NRTLTTLDLQVASIGTQGAQALGEALAVNR-TLEILDLRGNDIGVAGAKALANALKLNSS 941

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           L  +NL  N IG+ GA  I++A+K N    T+++
Sbjct: 942 LRRLNLQGNPIGESGARMISEAIKTNAPTCTVEM 975



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 169/397 (42%), Gaps = 72/397 (18%)

Query: 251 LQLSSVDLRDEGA--------KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-EN 301
           LQLS  D+R + A          +  LL      + L L+NN         L   L  ++
Sbjct: 605 LQLS--DIRSQEANLSLCLSQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKD 662

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             I+++ L  N  G  GA ALA+ L  N+SL  L L  N+IG +G +AL   L   +  L
Sbjct: 663 CRIQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNR-TL 721

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L + +N I   G   +AE + + +++  + L  N IG  GA+++ADALKQN+++  + 
Sbjct: 722 TSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELM 781

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLD-------------------------LAYNPIG 456
              N I   GA A+A  LK N  + +LD                         L  N I 
Sbjct: 782 FSSNTIGDGGAMALAEALKGNQGLENLDSSLDQTAVSRTWDSHISSALSFIRSLQSNAIS 841

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             G   L   L  +  +++L L W  I A  A  +   L+ N T++ LDL+   +     
Sbjct: 842 NTGVAVLMRALCVNQTLSSLNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIGT--- 898

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
                                        QGA+ L ++   VN  L  +DL  N+I   G
Sbjct: 899 -----------------------------QGAQALGEAL-AVNRTLEILDLRGNDIGVAG 928

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           A A+A ALK N   ++  LNL  N + + G   +++A
Sbjct: 929 AKALANALKLNS--SLRRLNLQGNPIGESGARMISEA 963



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 159/340 (46%), Gaps = 26/340 (7%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           LL+ S IRS     N    L  + L   L      + L L  N   D  +  L S LS +
Sbjct: 604 LLQLSDIRSQE--ANLSLCLSQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGK 661

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             ++  + +  N I  KGA  +A  +   +SL+ ++L  N IG +GA+ +ADALK+NRT+
Sbjct: 662 DCRIQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTL 721

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T++ L  N I   G   +A  L  N  I+ L L  N IG  GA+ +++ LK + ++  L 
Sbjct: 722 TSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELM 781

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGL---RDEVCSGCNGLSFFHS----AIY 530
                IG  GA  +A+ L+ N  +  LD   +     R       + LSF  S    AI 
Sbjct: 782 FSSNTIGDGGAMALAEALKGNQGLENLDSSLDQTAVSRTWDSHISSALSFIRSLQSNAIS 841

Query: 531 SLK-HMLFYSLCI-----------NYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
           +    +L  +LC+           N++Q   A+ L Q+ + +N  LT++DL    I   G
Sbjct: 842 NTGVAVLMRALCVNQTLSSLNLQWNFIQAGAARALGQALQ-LNRTLTTLDLQVASIGTQG 900

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           A A+ +AL  N  + +  L+L  N +   G  AL +A  L
Sbjct: 901 AQALGEALAVNRTLEI--LDLRGNDIGVAGAKALANALKL 938


>gi|403349288|gb|EJY74083.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
 gi|403355535|gb|EJY77346.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
 gi|403358592|gb|EJY78952.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
          Length = 999

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 227/453 (50%), Gaps = 13/453 (2%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +  KELR   +VD+      D  + F+ ++L  +     +    N IT AG +     L+
Sbjct: 93  KMKKELR---TVDLGENRITDASIGFIGDALRTHVRLHMLFLDNNKITDAGAEGLAECLK 149

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +   L+ LN+  N IG EG + L   L  N G+ +L   S  + +EGA AIAE ++    
Sbjct: 150 NKQDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEAMQMMDS 209

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ + + NN I   G  +L+  L+EN T+ SL++  N   + GA ALAK L     L +L
Sbjct: 210 LKKICIENNGIKDRGAIALSRVLMENDTLLSLYIENNQISSQGAIALAKMLRNKMKLSKL 269

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +++ N IGDEG++A+  G+S  +  L V+ I +  I+       A  +KN + L  I L 
Sbjct: 270 NMNHNPIGDEGMQAISEGISQNE-TLRVITIADAGITKNSLAVFARSLKNKRFLTKILLD 328

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG EGA+ +A+ LK+N T+T + L    I  +GA A+A  L +   +  LDL  N I
Sbjct: 329 SNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNKRNLLVLDLNNNKI 388

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
            A G  A+ + ++ H  +  L +    IG  GA+ +A +L     I+ + L  NG+  E 
Sbjct: 389 LAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYITEIWLSMNGIFAE- 447

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCIN--YLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                G      A+   K++    L  N   +QG + L +    +++ +  ++LA N I 
Sbjct: 448 -----GAIALGEALKDKKYLEVLVLKKNDINIQGIRALKEVLN-LSKTIKELNLASNAIG 501

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           D+GA  + +AL   ++  +  L L++N +T  G
Sbjct: 502 DEGASIVCEALINKQNQQLNYLGLSDNKITTQG 534



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 211/432 (48%), Gaps = 12/432 (2%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E ++F  N      I+A    ++    L+T++L  N I D  +  + D L  +  +  L 
Sbjct: 71  EGINFRCNNFNERVIEALCQGIKMKKELRTVDLGENRITDASIGFIGDALRTHVRLHMLF 130

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L +  + D GA+ +AE LKN   LR+L ++NN I   G   LA  L  N  +  L+ + N
Sbjct: 131 LDNNKITDAGAEGLAECLKNKQDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSN 190

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA A+A+ ++   SL+++ +  N I D G  AL S +      L  L I NN IS
Sbjct: 191 RIGEEGAVAIAEAMQMMDSLKKICIENNGIKDRGAIAL-SRVLMENDTLLSLYIENNQIS 249

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           ++GA  +A+ ++N   L  +N+  N IGDEG + I++ + QN T+  I +    I     
Sbjct: 250 SQGAIALAKMLRNKMKLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSL 309

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           +  AR LK+   +T + L  N IG +GAK L+E LK +  +  L L  C I   GA  +A
Sbjct: 310 AVFARSLKNKRFLTKILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALA 369

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKC 550
             L     + +LDL  N +   +  GC  +        +L+ +   +   NY+   GAK 
Sbjct: 370 TALTNKRNLLVLDLNNNKI---LAGGCIAICKNIQHHTTLRELYMSN---NYIGPDGAKQ 423

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           LA+   V  + +T I L+ N I  +GA A+ +ALK  + + V  L L  N +   G  AL
Sbjct: 424 LAKVL-VNKKYITEIWLSMNGIFAEGAIALGEALKDKKYLEV--LVLKKNDINIQGIRAL 480

Query: 611 TDAKDLVYEMSE 622
            +  +L   + E
Sbjct: 481 KEVLNLSKTIKE 492



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/317 (35%), Positives = 170/317 (53%), Gaps = 6/317 (1%)

Query: 157 FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK LR     S ++M+    GDEG+  ++E +  N+T   ++ A  GIT   +  F   
Sbjct: 256 LAKMLRNKMKLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSLAVFARS 315

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++   L  + L  N IG EG K L + L +N  +  L LS   + +EGA A+A  L N 
Sbjct: 316 LKNKRFLTKILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNK 375

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L VL+LNNN I   G  ++ + +  ++T+R L+++ NY G  GA  LAK L   K + 
Sbjct: 376 RNLLVLDLNNNKILAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYIT 435

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+ L  N I  EG  AL   L  +K  L VL +  N I+ +G   + E +   K++  +N
Sbjct: 436 EIWLSMNGIFAEGAIALGEALKDKK-YLEVLVLKKNDINIQGIRALKEVLNLSKTIKELN 494

Query: 394 LYMNDIGDEGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           L  N IGDEGA  + +AL  KQN+ +  + L  N I ++GA  +A+++   + +T L LA
Sbjct: 495 LASNAIGDEGASIVCEALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCTTLTELYLA 554

Query: 452 YNPIGADGAKALSEVLK 468
            N I  DGAKAL + +K
Sbjct: 555 NNEIDNDGAKALVKAIK 571



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 212/489 (43%), Gaps = 69/489 (14%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K  +    +++     G EG   LA  L  N    ++   +N I   G  A    
Sbjct: 144 LAECLKNKQDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEA 203

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +Q   +LK + +  N I D G   L  +L++N  +  L + +  +  +GA A+A++L+N 
Sbjct: 204 MQMMDSLKKICIENNGIKDRGAIALSRVLMENDTLLSLYIENNQISSQGAIALAKMLRNK 263

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIR---------------------------- 305
             L  L +N+N I   G  +++E + +N T+R                            
Sbjct: 264 MKLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSLAVFARSLKNKRFLT 323

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            + L+ N  G  GA  LA+GL+ N++L  LHL    I +EG  AL + L++++  L +  
Sbjct: 324 KILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNKRNLLVLDL 383

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
              N I A G   + + I++  +L  + +  N IG +GA+++A  L   + IT I L  N
Sbjct: 384 NN-NKILAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYITEIWLSMN 442

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I ++GA A+   LKD   +  L L  N I   G +AL EVL     I  L L    IG 
Sbjct: 443 GIFAEGAIALGEALKDKKYLEVLVLKKNDINIQGIRALKEVLNLSKTIKELNLASNAIGD 502

Query: 486 SGAEFVADML--RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
            GA  V + L  + N  ++ L L  N +                                
Sbjct: 503 EGASIVCEALINKQNQQLNYLGLSDNKITT------------------------------ 532

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
             QGA  +AQ        LT + LA NEI +DGA A+ +A+K   D    +++L NN   
Sbjct: 533 --QGAIKVAQLISKCT-TLTELYLANNEIDNDGAKALVKAIKGRTD--FKNIDLDNNL-- 585

Query: 604 KFGQSALTD 612
            F   A+T+
Sbjct: 586 -FSGEAITE 593



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 226/518 (43%), Gaps = 52/518 (10%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           + K+  E  + L E  KE    +++ +S     +EG   LA +L   +    +    N I
Sbjct: 329 SNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNKRNLLVLDLNNNKI 388

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
            A G  A    +Q +  L+ L +S N IG +G K L  +LV+   +  + LS   +  EG
Sbjct: 389 LAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYITEIWLSMNGIFAEG 448

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A A+ E LK+   L VL L  N I+  G  +L E L  + TI+ L+L  N  G  GA+ +
Sbjct: 449 AIALGEALKDKKYLEVLVLKKNDINIQGIRALKEVLNLSKTIKELNLASNAIGDEGASIV 508

Query: 323 AK-------------GLEGNK-----------------SLRELHLHGNSIGDEGIRALMS 352
            +             GL  NK                 +L EL+L  N I ++G +AL+ 
Sbjct: 509 CEALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCTTLTELYLANNEIDNDGAKALVK 568

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            +  R      +D+ NN  S +    +   +     L  +NL  + + D     +A  +K
Sbjct: 569 AIKGRTD-FKNIDLDNNLFSGEAITELFTIL----PLNKLNLIKSILTDAQVTPLARQMK 623

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N++++ I +  N +     + +A  + DNSV+T L + +N +       L + LK    
Sbjct: 624 INKSLSQIYMSHNQLSDNSVALLADAIVDNSVLTELFITHNDLSGTSGILLIQALKNKPG 683

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           + +L L  C++       +A+ L+ N ++  L L +N +      G N   F    I + 
Sbjct: 684 LKSLALNSCKLNQGLLRELAESLKDNESLKELYLYSNQI------GPNQAQFVSQIIQNK 737

Query: 533 KHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
           + +    L  N +   GA  LAQ+     E LT + L  N I   G  A+++AL AN + 
Sbjct: 738 RKLTSLGLSNNQIAEDGAIFLAQNGLQNKENLTKLSLEGNFIGGTGLIAVSEALMANTE- 796

Query: 591 AVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 628
            +  L L NN L   G        D + +M + ++N++
Sbjct: 797 -LQELFLYNNHLNDVGM-------DKLGQMLQNKINLY 826



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 39/334 (11%)

Query: 282 NNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           NNN+ID  G +S+  ++L +   +  ++   N        AL +G++  K LR + L  N
Sbjct: 47  NNNIIDTEGMSSIFSSILRSYDKLEGINFRCNNFNERVIEALCQGIKMKKELRTVDLGEN 106

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I D  I  +   L +   +L +L + NN I+  GA  +AE +KN + L  +N+  N IG
Sbjct: 107 RITDASIGFIGDALRTHV-RLHMLFLDNNKITDAGAEGLAECLKNKQDLRILNIDNNQIG 165

Query: 401 DEGAEKIADALKQN----------------------------RTITTIDLGGNNIHSKGA 432
            EGA K+A  LK N                             ++  I +  N I  +GA
Sbjct: 166 PEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEAMQMMDSLKKICIENNGIKDRGA 225

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            A++RVL +N  + SL +  N I + GA AL+++L+    ++ L +    IG  G + ++
Sbjct: 226 IALSRVLMENDTLLSLYIENNQISSQGAIALAKMLRNKMKLSKLNMNHNPIGDEGMQAIS 285

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY--LQGAKC 550
           + +  N T+ ++ +   G+        N L+ F  ++ + + +    L  N   ++GAK 
Sbjct: 286 EGISQNETLRVITIADAGITK------NSLAVFARSLKNKRFLTKILLDSNKIGIEGAKI 339

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           LA+  K  NE LT++ L+   I ++GA A+A AL
Sbjct: 340 LAEGLK-ENETLTNLHLSHCLILEEGAVALATAL 372



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 30/336 (8%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++ S + MS     D  +  LA+++  N    E+    N ++          L++   LK
Sbjct: 626 KSLSQIYMSHNQLSDNSVALLADAIVDNSVLTELFITHNDLSGTSGILLIQALKNKPGLK 685

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L L+   +    ++ L + L DN  ++ L L S  +    A+ ++++++N   L  L L
Sbjct: 686 SLALNSCKLNQGLLRELAESLKDNESLKELYLYSNQIGPNQAQFVSQIIQNKRKLTSLGL 745

Query: 282 NNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +NN I   G   LA+  L+N   +  L L GN+ G  G  A+++ L  N  L+EL L+ N
Sbjct: 746 SNNQIAEDGAIFLAQNGLQNKENLTKLSLEGNFIGGTGLIAVSEALMANTELQELFLYNN 805

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI- 399
            + D G+  L   L + K  L  L +  N I ++GA ++   IK  K+   + L  NDI 
Sbjct: 806 HLNDVGMDKLGQMLQN-KINLYALGMEFNKIGSEGAAYIFNNIKKLKNFEKLYLNQNDIK 864

Query: 400 ---------------------------GDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
                                      GDEG + IA ALK N+++    L  N   ++ A
Sbjct: 865 SEVGDAMIDCLSVIENLKEIRLSNNKLGDEGGKAIALALKVNKSLRICQLSNNKFSAEAA 924

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             +  V+K NS +  LDL+ N I  +  + L+   K
Sbjct: 925 KEMVEVIKQNSQLRDLDLSSNLIIMEELQELANAFK 960



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 173/375 (46%), Gaps = 34/375 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           F ++D+    F  E +  L   L  N+    ++   + +T A +      ++ N +L  +
Sbjct: 576 FKNIDLDNNLFSGEAITELFTILPLNK----LNLIKSILTDAQVTPLARQMKINKSLSQI 631

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +S N + D  V  L D +VDN+ +  L ++  DL       + + LKN   L+ L LN+
Sbjct: 632 YMSHNQLSDNSVALLADAIVDNSVLTELFITHNDLSGTSGILLIQALKNKPGLKSLALNS 691

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGG--------------------ALGANALA 323
             ++      LAE+L +N +++ L+L  N  G                     L  N +A
Sbjct: 692 CKLNQGLLRELAESLKDNESLKELYLYSNQIGPNQAQFVSQIIQNKRKLTSLGLSNNQIA 751

Query: 324 K---------GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           +         GL+  ++L +L L GN IG  G+ A+   L +   +L  L + NN ++  
Sbjct: 752 EDGAIFLAQNGLQNKENLTKLSLEGNFIGGTGLIAVSEALMANT-ELQELFLYNNHLNDV 810

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   + + ++N  +L  + +  N IG EGA  I + +K+ +    + L  N+I S+   A
Sbjct: 811 GMDKLGQMLQNKINLYALGMEFNKIGSEGAAYIFNNIKKLKNFEKLYLNQNDIKSEVGDA 870

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   L     +  + L+ N +G +G KA++  LK + ++   +L   +  A  A+ + ++
Sbjct: 871 MIDCLSVIENLKEIRLSNNKLGDEGGKAIALALKVNKSLRICQLSNNKFSAEAAKEMVEV 930

Query: 495 LRYNNTISILDLRAN 509
           ++ N+ +  LDL +N
Sbjct: 931 IKQNSQLRDLDLSSN 945



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 5/225 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + + G   G  GL  ++E+L  N   +E+    N +   G+     +LQ+ I L  L
Sbjct: 769 LTKLSLEGNFIGGTGLIAVSEALMANTELQELFLYNNHLNDVGMDKLGQMLQNKINLYAL 828

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +  N IG EG   + + +      E+L L+  D++ E   A+ + L     L+ + L+N
Sbjct: 829 GMEFNKIGSEGAAYIFNNIKKLKNFEKLYLNQNDIKSEVGDAMIDCLSVIENLKEIRLSN 888

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +   G  ++A AL  N ++R   L+ N   A  A  + + ++ N  LR+L L  N I 
Sbjct: 889 NKLGDEGGKAIALALKVNKSLRICQLSNNKFSAEAAKEMVEVIKQNSQLRDLDLSSNLII 948

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKG--AF-HVAEYIKN 385
            E ++ L +    ++  L  L++ NN ISA+   AF H  +++ N
Sbjct: 949 MEELQELANAF--KESSLECLNLRNNLISAEEILAFDHTLQFVTN 991



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 9/291 (3%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           + + L     L +L    N+I D EG+ ++ S +     KL  ++   N+ + +    + 
Sbjct: 30  IQRDLRDRPDLMQLTCENNNIIDTEGMSSIFSSILRSYDKLEGINFRCNNFNERVIEALC 89

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + IK  K L  ++L  N I D     I DAL+ +  +  + L  N I   GA  +A  LK
Sbjct: 90  QGIKMKKELRTVDLGENRITDASIGFIGDALRTHVRLHMLFLDNNKITDAGAEGLAECLK 149

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           +   +  L++  N IG +GA+ L+  LK +  ++ L     +IG  GA  +A+ ++  ++
Sbjct: 150 NKQDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEAMQMMDS 209

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           +  + +  NG++D    G   LS       +L  +   +  I+  QGA  LA+  +    
Sbjct: 210 LKKICIENNGIKDR---GAIALSRVLMENDTLLSLYIENNQISS-QGAIALAKMLR-NKM 264

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL---NLANNFLTKFGQS 608
            L+ +++  N I D+G  AI++ +  NE + V ++    +  N L  F +S
Sbjct: 265 KLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSLAVFARS 315



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 3/252 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAES-LGYNQTAEEVSFAANGITAAGIKAF 210
           Q +++  +  R  +S+ +S     ++G  FLA++ L   +   ++S   N I   G+ A 
Sbjct: 728 QFVSQIIQNKRKLTSLGLSNNQIAEDGAIFLAQNGLQNKENLTKLSLEGNFIGGTGLIAV 787

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L +N  L+ L L  N + D G+  L  +L +   +  L +    +  EGA  I   +
Sbjct: 788 SEALMANTELQELFLYNNHLNDVGMDKLGQMLQNKINLYALGMEFNKIGSEGAAYIFNNI 847

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           K       L LN N I      ++ + L     ++ + L+ N  G  G  A+A  L+ NK
Sbjct: 848 KKLKNFEKLYLNQNDIKSEVGDAMIDCLSVIENLKEIRLSNNKLGDEGGKAIALALKVNK 907

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SLR   L  N    E  + ++  +  +  +L  LD+ +N I  +    +A   K   SL 
Sbjct: 908 SLRICQLSNNKFSAEAAKEMVEVI-KQNSQLRDLDLSSNLIIMEELQELANAFKES-SLE 965

Query: 391 WINLYMNDIGDE 402
            +NL  N I  E
Sbjct: 966 CLNLRNNLISAE 977


>gi|320170919|gb|EFW47818.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 801

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 166/304 (54%), Gaps = 25/304 (8%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    IGDE  K + + L  N  V  L L   D+ D GA+AIAE LK N+ L  + L 
Sbjct: 32  LDLELGQIGDEEAKAIAEALKVNNTVTELFLQENDIGDVGAQAIAEALKVNTKLTTVYLY 91

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN+I   G  ++AEAL  N+T+ +L+L  N  G +GA A+A+ L+ N +L+EL+L  N I
Sbjct: 92  NNLIGDVGAHAIAEALKMNTTLTTLYLGKNQIGDVGAQAIAEALKVNTTLKELYLERNFI 151

Query: 343 GDEGIRALMSGLSSRKGKLAVLD-----------IGNNSISAKGAF-----------HVA 380
            + GI+AL + + +R  KL   D           + + +  A+ +             + 
Sbjct: 152 SENGIKAL-NQVGNRSCKLWTDDQRKPSPAQLQEMASRAAQARPSVLLDQNTNQRQRQLY 210

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +KN    L+++     IGDE A+ IA+ALK N T+TT++L  N I   GA AI   LK
Sbjct: 211 DEVKNESGQLYLD--QERIGDEEAKAIAEALKVNTTLTTLNLQQNQIGDVGARAITEALK 268

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +T+L L+ N IG  GA+A++E LK +  +  L L    IG  GA+ +A+ L+ N T
Sbjct: 269 VNTTLTTLYLSANQIGDVGAQAIAEALKVNTTLTWLFLDNNLIGDVGAQAIAEALKANKT 328

Query: 501 ISIL 504
           +  L
Sbjct: 329 LKAL 332



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 151/355 (42%), Gaps = 24/355 (6%)

Query: 146 LFRESKQTLNEFAKELR-AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           L++   Q   E   E++ A   +D+     GDE    +AE+L  N T  E+    N I  
Sbjct: 10  LYQNMNQRQRELYDEVKNANGELDLELGQIGDEEAKAIAEALKVNNTVTELFLQENDIGD 69

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +A    L+ N  L T+ L  N IGD G   + + L  N  +  L L    + D GA+
Sbjct: 70  VGAQAIAEALKVNTKLTTVYLYNNLIGDVGAHAIAEALKMNTTLTTLYLGKNQIGDVGAQ 129

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSL------------------AEALLENSTIRS 306
           AIAE LK N+ L+ L L  N I  +G  +L                  + A L+    R+
Sbjct: 130 AIAEALKVNTTLKELYLERNFISENGIKALNQVGNRSCKLWTDDQRKPSPAQLQEMASRA 189

Query: 307 LHLNGNYGGALGANALAKGL--EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                +       N   + L  E      +L+L    IGDE  +A+   L      L  L
Sbjct: 190 AQARPSVLLDQNTNQRQRQLYDEVKNESGQLYLDQERIGDEEAKAIAEALKV-NTTLTTL 248

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           ++  N I   GA  + E +K   +L  + L  N IGD GA+ IA+ALK N T+T + L  
Sbjct: 249 NLQQNQIGDVGARAITEALKVNTTLTTLYLSANQIGDVGAQAIAEALKVNTTLTWLFLDN 308

Query: 425 NNIHSKGASAIARVLKDNSVITSL--DLAYNPIGADGAKALSEVLKFHGNINTLK 477
           N I   GA AIA  LK N  + +L  D    P  A   +  S   +    I T K
Sbjct: 309 NLIGDVGAQAIAEALKANKTLKALKTDDQRKPSPAQLQEMASRAAQVRATIPTTK 363



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 142/306 (46%), Gaps = 40/306 (13%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L    IGDE  +A+   L      +  L +  N I   GA  +AE +K    L  + 
Sbjct: 31  ELDLELGQIGDEEAKAIAEALKV-NNTVTELFLQENDIGDVGAQAIAEALKVNTKLTTVY 89

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LY N IGD GA  IA+ALK N T+TT+ LG N I   GA AIA  LK N+ +  L L  N
Sbjct: 90  LYNNLIGDVGAHAIAEALKMNTTLTTLYLGKNQIGDVGAQAIAEALKVNTTLKELYLERN 149

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWC------------QIGASGAEFVADMLRYNNTI 501
            I  +G KAL++V    GN  + KL W             ++ +  A+    +L   NT 
Sbjct: 150 FISENGIKALNQV----GN-RSCKL-WTDDQRKPSPAQLQEMASRAAQARPSVLLDQNT- 202

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAI-----YSLKHMLFYSLCINYLQ---------G 547
              + R   L DEV +    L      I      ++   L  +  +  L          G
Sbjct: 203 ---NQRQRQLYDEVKNESGQLYLDQERIGDEEAKAIAEALKVNTTLTTLNLQQNQIGDVG 259

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           A+ + ++ KV N  LT++ L+ N+I D GA AIA+ALK N    +T L L NN +   G 
Sbjct: 260 ARAITEALKV-NTTLTTLYLSANQIGDVGAQAIAEALKVN--TTLTWLFLDNNLIGDVGA 316

Query: 608 SALTDA 613
            A+ +A
Sbjct: 317 QAIAEA 322



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 140/316 (44%), Gaps = 54/316 (17%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL  N+T+  L L  N  G +GA A+A+ L+ N  L  ++L+ N IGD G  A+  
Sbjct: 46  AIAEALKVNNTVTELFLQENDIGDVGAQAIAEALKVNTKLTTVYLYNNLIGDVGAHAIAE 105

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  L +G N I   GA  +AE +K   +L  + L  N I + G + +     
Sbjct: 106 ALKM-NTTLTTLYLGKNQIGDVGAQAIAEALKVNTTLKELYLERNFISENGIKALNQVGN 164

Query: 413 QNRTITTIDLGG------NNIHSKGASAIARVLKDNSVITSLDLAYNP------------ 454
           ++  + T D           + S+ A A   VL D +        Y+             
Sbjct: 165 RSCKLWTDDQRKPSPAQLQEMASRAAQARPSVLLDQNTNQRQRQLYDEVKNESGQLYLDQ 224

Query: 455 --IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
             IG + AKA++E LK +  + TL L   QIG  GA  + + L+ N T++ L L AN + 
Sbjct: 225 ERIGDEEAKAIAEALKVNTTLTTLNLQQNQIGDVGARAITEALKVNTTLTTLYLSANQIG 284

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
           D                                 GA+ +A++ KV N  LT + L  N I
Sbjct: 285 DV--------------------------------GAQAIAEALKV-NTTLTWLFLDNNLI 311

Query: 573 RDDGAFAIAQALKANE 588
            D GA AIA+ALKAN+
Sbjct: 312 GDVGAQAIAEALKANK 327



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 25/299 (8%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           G++  E  + + E  K     + + +   + GD G   +AE+L  N     V    N I 
Sbjct: 37  GQIGDEEAKAIAEALKVNNTVTELFLQENDIGDVGAQAIAEALKVNTKLTTVYLYNNLIG 96

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
             G  A    L+ N  L TL L  N IGD G + + + L  N  ++ L L    + + G 
Sbjct: 97  DVGAHAIAEALKMNTTLTTLYLGKNQIGDVGAQAIAEALKVNTTLKELYLERNFISENGI 156

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLA--------EALLENSTIR---------- 305
           KA+ ++   N   ++   +      +    +A          LL+ +T +          
Sbjct: 157 KALNQV--GNRSCKLWTDDQRKPSPAQLQEMASRAAQARPSVLLDQNTNQRQRQLYDEVK 214

Query: 306 ----SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
                L+L+    G   A A+A+ L+ N +L  L+L  N IGD G RA+   L      L
Sbjct: 215 NESGQLYLDQERIGDEEAKAIAEALKVNTTLTTLNLQQNQIGDVGARAITEALKV-NTTL 273

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
             L +  N I   GA  +AE +K   +L W+ L  N IGD GA+ IA+ALK N+T+  +
Sbjct: 274 TTLYLSANQIGDVGAQAIAEALKVNTTLTWLFLDNNLIGDVGAQAIAEALKANKTLKAL 332


>gi|320163960|gb|EFW40859.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 633

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/340 (33%), Positives = 172/340 (50%), Gaps = 45/340 (13%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           ER      ++ D GA+AIAE LK NS +  L L  N I  +G  ++AE L  N T+    
Sbjct: 17  ERFLQQCENIDDAGAQAIAEGLKGNSNITALSLGWNQIGDAGARAIAETLKRNMTVTE-- 74

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
                     A A+A+ L+ N+++ +L L  N IGD G +A+   L      +  LD+  
Sbjct: 75  ---------PARAIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNT-TVTNLDLWQ 124

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  ++  +K  K+L+ I+L  N +GD GA+ IA+ALK N T+  + L  N + 
Sbjct: 125 NQIGDAGAQAISVALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLG 184

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA+AIA VLK N+ + +L LA N IG  GA+A++E LK +  +  L L   QIG +GA
Sbjct: 185 DAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGA 244

Query: 489 EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
           + +A+ L+ N  + +  LR N + +                                 GA
Sbjct: 245 QAIAEALKVNTGLIVPCLRENEIGNA--------------------------------GA 272

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
           + +A++ K VN  L  + L  N+I D GA A+A+A K N+
Sbjct: 273 QAIAEALK-VNSTLYGLFLGNNQIGDAGAQALAEAFKVNQ 311



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 174/347 (50%), Gaps = 56/347 (16%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL---- 354
           ++N+  R L    N   A GA A+A+GL+GN ++  L L  N IGD G RA+   L    
Sbjct: 12  VKNANERFLQQCENIDDA-GAQAIAEGLKGNSNITALSLGWNQIGDAGARAIAETLKRNM 70

Query: 355 ----------SSRKGKLAVLDIG--NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
                      + K    V D+G   N I   GA  +AE +K   ++  ++L+ N IGD 
Sbjct: 71  TVTEPARAIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDA 130

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ I+ ALK N+T+  IDL GN +   GA AIA  LK N+ + +L L  N +G  GA A
Sbjct: 131 GAQAISVALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATA 190

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           ++EVLK +  +  L L   QIG +GA+ +A+ L+ N T++ L L+ N + +         
Sbjct: 191 IAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNA-------- 242

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
                                   GA+ +A++ K VN  L    L  NEI + GA AIA+
Sbjct: 243 ------------------------GAQAIAEALK-VNTGLIVPCLRENEIGNAGAQAIAE 277

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           ALK N    +  L L NN +   G  AL +A    +++++K+V+IF 
Sbjct: 278 ALKVNS--TLYGLFLGNNQIGDAGAQALAEA----FKVNQKQVDIFL 318



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 149/299 (49%), Gaps = 12/299 (4%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
            N  D G   +AE L  N     +S   N I  AG +A    L+ N+ +           
Sbjct: 24  ENIDDAGAQAIAEGLKGNSNITALSLGWNQIGDAGARAIAETLKRNMTVT---------- 73

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            E  + + + L  N  V  L LS+  + D GA+AIAE LK N+ +  L+L  N I  +G 
Sbjct: 74  -EPARAIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGA 132

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            +++ AL  N T+  + LNGN  G  GA A+A+ L+ N +L  L LH N +GD G  A+ 
Sbjct: 133 QAISVALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIA 192

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L      L  L +  N I   GA  +AE +K  K+L  + L  N IG+ GA+ IA+AL
Sbjct: 193 EVLKVNT-TLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAEAL 251

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           K N  +    L  N I + GA AIA  LK NS +  L L  N IG  GA+AL+E  K +
Sbjct: 252 KVNTGLIVPCLRENEIGNAGAQAIAEALKVNSTLYGLFLGNNQIGDAGAQALAEAFKVN 310



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 151/301 (50%), Gaps = 12/301 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++ +     GD G   +AE+L  N T  E +           +A    L+ N  +  L
Sbjct: 44  ITALSLGWNQIGDAGARAIAETLKRNMTVTEPA-----------RAIAETLKVNRTVTDL 92

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            LS N IGD G + + + L  N  V  L L    + D GA+AI+  LK N  L  ++LN 
Sbjct: 93  GLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQAISVALKVNKTLIKIDLNG 152

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +  +G  ++AEAL  N+T+ +L L+ N  G  GA A+A+ L+ N +L+ L L  N IG
Sbjct: 153 NQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIG 212

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G +A+   L   K  L  L +  N I   GA  +AE +K    L+   L  N+IG+ G
Sbjct: 213 EAGAQAIAEALKVNK-TLTCLFLKQNQIGNAGAQAIAEALKVNTGLIVPCLRENEIGNAG 271

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ IA+ALK N T+  + LG N I   GA A+A   K N     + L  N I    ++A+
Sbjct: 272 AQAIAEALKVNSTLYGLFLGNNQIGDAGAQALAEAFKVNQKQVDIFLERNCISNTCSEAI 331

Query: 464 S 464
           +
Sbjct: 332 N 332



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 29/287 (10%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K  R  + + +S    GD G   +AE+L  N T   +    N I  AG +
Sbjct: 74  EPARAIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQ 133

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L  ++L+GN +G                            D GA+AIAE
Sbjct: 134 AISVALKVNKTLIKIDLNGNQVG----------------------------DAGAQAIAE 165

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N+ L  L L+NN +  +G T++AE L  N+T+++L L  N  G  GA A+A+ L+ 
Sbjct: 166 ALKVNTTLANLGLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALKV 225

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           NK+L  L L  N IG+ G +A+   L    G L V  +  N I   GA  +AE +K   +
Sbjct: 226 NKTLTCLFLKQNQIGNAGAQAIAEALKVNTG-LIVPCLRENEIGNAGAQAIAEALKVNST 284

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           L  + L  N IGD GA+ +A+A K N+    I L  N I +  + AI
Sbjct: 285 LYGLFLGNNQIGDAGAQALAEAFKVNQKQVDIFLERNCISNTCSEAI 331


>gi|320164062|gb|EFW40961.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 467

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/256 (39%), Positives = 141/256 (55%), Gaps = 2/256 (0%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L  S   L D GA+A+AE LK N+ +  L L  N I   G  ++AEAL  N T+ ++ L
Sbjct: 18  ELSWSRWQLGDAGAQALAEALKVNTTVTRLHLYENQIGDDGARAIAEALKFN-TVTAVAL 76

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G  GA A+A+ L+ NK+++EL L  N I D G +A+   L      L  LD+  N
Sbjct: 77  SQNAIGNAGAKAIAEALKTNKTVKELFLGENQISDSGAQAIAEALKVNT-TLTELDLQRN 135

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
                GA  +A  +K   +L W++L  N IGD GA+ IA+ALK N ++TT+ LG N I  
Sbjct: 136 PTGVAGARAIAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTLGLGWNQIGD 195

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA AIA  LK N+ +TSL LAYN IG  GA+A++E LK +  +  L L    I   G +
Sbjct: 196 AGAQAIAEALKVNTTMTSLHLAYNEIGDAGAQAIAEALKVNSTLTELDLYANGISNIGVQ 255

Query: 490 FVADMLRYNNTISILD 505
            + +  + N     LD
Sbjct: 256 VICEAYKINGMCDDLD 271



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 142/273 (52%), Gaps = 35/273 (12%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA ALA+ L+ N ++  LHL+ N IGD+G RA+   L  +   +  + +  N+I   
Sbjct: 27  GDAGAQALAEALKVNTTVTRLHLYENQIGDDGARAIAEAL--KFNTVTAVALSQNAIGNA 84

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K  K++  + L  N I D GA+ IA+ALK N T+T +DL  N     GA A
Sbjct: 85  GAKAIAEALKTNKTVKELFLGENQISDSGAQAIAEALKVNTTLTELDLQRNPTGVAGARA 144

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK  + +T L L  N IG  GA+A++E LK + ++ TL LGW QIG +GA+ +A+ 
Sbjct: 145 IAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTLGLGWNQIGDAGAQAIAEA 204

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L+ N T++ L L  N + D                                 GA+ +A++
Sbjct: 205 LKVNTTMTSLHLAYNEIGDA--------------------------------GAQAIAEA 232

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            K VN  LT +DL  N I + G   I +A K N
Sbjct: 233 LK-VNSTLTELDLYANGISNIGVQVICEAYKIN 264



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 136/293 (46%), Gaps = 30/293 (10%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F K   A   +  S    GD G   LAE+L  N T   +    N I   G +A    L+ 
Sbjct: 9   FNKGKNASGELSWSRWQLGDAGAQALAEALKVNTTVTRLHLYENQIGDDGARAIAEALKF 68

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  +  + LS N IG+ G K + + L  N  V+ L L    + D GA+AIAE LK N+ L
Sbjct: 69  N-TVTAVALSQNAIGNAGAKAIAEALKTNKTVKELFLGENQISDSGAQAIAEALKVNTTL 127

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L  N    +G  ++A AL   +T+  L L+ N  G  GA A+A+ L+ N S+  L 
Sbjct: 128 TELDLQRNPTGVAGARAIAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTLG 187

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD G +A                             +AE +K   ++  ++L  
Sbjct: 188 LGWNQIGDAGAQA-----------------------------IAEALKVNTTMTSLHLAY 218

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           N+IGD GA+ IA+ALK N T+T +DL  N I + G   I    K N +   LD
Sbjct: 219 NEIGDAGAQAIAEALKVNSTLTELDLYANGISNIGVQVICEAYKINGMCDDLD 271



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 14/128 (10%)

Query: 477 KLGWC--QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           +L W   Q+G +GA+ +A+ L+ N T++ L L  N + D+          F++       
Sbjct: 18  ELSWSRWQLGDAGAQALAEALKVNTTVTRLHLYENQIGDDGARAIAEALKFNT------- 70

Query: 535 MLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
           +   +L  N +   GAK +A++ K  N+ +  + L  N+I D GA AIA+ALK N    +
Sbjct: 71  VTAVALSQNAIGNAGAKAIAEALK-TNKTVKELFLGENQISDSGAQAIAEALKVN--TTL 127

Query: 593 TSLNLANN 600
           T L+L  N
Sbjct: 128 TELDLQRN 135


>gi|320165192|gb|EFW42091.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 455

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 135/243 (55%), Gaps = 1/243 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS N IGD   + + + L  N     L LS   + D GA+AIAE LK N  L  L L+
Sbjct: 19  LYLSENQIGDAEAQIIAEALKVNTTATSLDLSENQIGDAGAQAIAEALKVNKTLFWLNLH 78

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AEAL  N T++ L L  N  G  GA A+A+ L+ NK+L  L+L  N I
Sbjct: 79  QNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQI 138

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G RA++  L   +  +  L + +N I   GA  +A+ +K  K+L W+NL  N IGD 
Sbjct: 139 GDAGARAIVDTLKVNE-TVTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDA 197

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N+ + T+ L  N I   GA AIA  L  N  +  LDL  N IG  G +A
Sbjct: 198 GAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQA 257

Query: 463 LSE 465
           + E
Sbjct: 258 IGE 260



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 130/249 (52%), Gaps = 1/249 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD     +AE+L  N TA  +  + N I  AG +A    L+ N  L  LNL  N
Sbjct: 21  LSENQIGDAEAQIIAEALKVNTTATSLDLSENQIGDAGAQAIAEALKVNKTLFWLNLHQN 80

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G   + + L  N  ++ L L+   + D GA+AIAE LK N  L +L L  N I  
Sbjct: 81  QIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQIGD 140

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++ + L  N T+ SLHL+ N  G  GA A+A  L+ NK+L  L+L  N IGD G +
Sbjct: 141 AGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDAGAQ 200

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L   K  +  L +  N I   GA  +AE +   K L W++L  N IGD G + I 
Sbjct: 201 AIAEALKVNK-MVKTLSLSENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQAIG 259

Query: 409 DALKQNRTI 417
           +A + NRT+
Sbjct: 260 EARQVNRTL 268



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 40/296 (13%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L  N IGD   + +   L       + LD+  N I   GA  +AE +K  K+L W+NL
Sbjct: 19  LYLSENQIGDAEAQIIAEALKVNTTATS-LDLSENQIGDAGAQAIAEALKVNKTLFWLNL 77

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N IGD GA  IA+AL+ N+T+  + L  N I   GA AIA  LK N  +T L+L  N 
Sbjct: 78  HQNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQ 137

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A+ + LK +  + +L L    IG +GA+ +AD L+ N T+S L+L  N + D 
Sbjct: 138 IGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDA 197

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                           GA+ +A++ K VN+ + ++ L+ N+I D
Sbjct: 198 --------------------------------GAQAIAEALK-VNKMVKTLSLSENQIGD 224

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD----LVYEMSEKEVN 626
            GA AIA+AL  N+   +  L+L  N +   G  A+ +A+     L + + +K++N
Sbjct: 225 IGAQAIAEALMVNKQ--LWWLDLKCNCIGDAGFQAIGEARQVNRTLAHLLIDKQIN 278



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 106/199 (53%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +    +++     GD G   +AE+L  N+T +E+S A N I  AG +A  
Sbjct: 60  QAIAEALKVNKTLFWLNLHQNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIA 119

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL  N IGD G + + D L  N  V  L L    + D GA+AIA+ LK
Sbjct: 120 EALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALK 179

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L +N I  +G  ++AEAL  N  +++L L+ N  G +GA A+A+ L  NK 
Sbjct: 180 VNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEALMVNKQ 239

Query: 332 LRELHLHGNSIGDEGIRAL 350
           L  L L  N IGD G +A+
Sbjct: 240 LWWLDLKCNCIGDAGFQAI 258



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 88/174 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    + ++    GD G   +AE+L  N+T   ++   N I  AG +A    L+ N  + 
Sbjct: 98  KTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVT 157

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+L  N IGD G + + D L  N  +  L L    + D GA+AIAE LK N +++ L L
Sbjct: 158 SLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSL 217

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + N I   G  ++AEAL+ N  +  L L  N  G  G  A+ +  + N++L  L
Sbjct: 218 SENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQAIGEARQVNRTLAHL 271



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 76/156 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +  + +++     GD G   + ++L  N+T   +    N I  AG +A  
Sbjct: 116 QAIAEALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIA 175

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL  N IGD G + + + L  N  V+ L LS   + D GA+AIAE L 
Sbjct: 176 DALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEALM 235

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            N  L  L+L  N I  +GF ++ EA   N T+  L
Sbjct: 236 VNKQLWWLDLKCNCIGDAGFQAIGEARQVNRTLAHL 271



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +S+ +     GD G   +A++L  N+T   ++   N I  AG +A    L+ N  +KTL
Sbjct: 156 VTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTL 215

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IGD G + + + L+ N  +  L L    + D G +AI E  + N  L  L    
Sbjct: 216 SLSENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQAIGEARQVNRTLAHL---- 271

Query: 284 NMIDYSGFTSLAEALLEN-STIRSLH 308
            +ID      LA +LL   ST   LH
Sbjct: 272 -LIDKQ-INPLAFSLLPRMSTAEDLH 295


>gi|320166000|gb|EFW42899.1| hypothetical protein CAOG_08031 [Capsaspora owczarzaki ATCC 30864]
          Length = 886

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 191/415 (46%), Gaps = 55/415 (13%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A  +A    L+ N  L  LNL  N IGD G K + + L  N  V  L L+   + D GA+
Sbjct: 35  AEAQAIAEALKVNRRLTELNLGWNQIGDAGAKAIAEALKVNRTVTVLGLNENQIGDAGAE 94

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAE--------ALLENSTIRSLHLNGNYGGA 316
            IAE LK N  L VL L+NN I   G   L +        AL          L  +   A
Sbjct: 95  VIAETLKVNDRLSVLSLDNNFIAEHGINRLKQVGNTACNPALERQHPPPPAQLQSHAAHA 154

Query: 317 -LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
              AN   +  +  +S   +    +   D+     +   S R      L++    I   G
Sbjct: 155 KFQANVSTESPQVARSTENVTQRQHQWYDK-----VKNASER------LNLCTKQIDDAG 203

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE ++   ++  ++L  N I D GA+ I++ALK N T+  IDLGGN I   GA AI
Sbjct: 204 AQTIAETLQLNTTVRKLDLSNNQIADAGAQAISEALKVNTTMNHIDLGGNLIGEAGAQAI 263

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A  LK N+  T L L+ N IG  GA+A++  LK +  + TL L   QIG +GA+ + + L
Sbjct: 264 AGALKVNTTPTFLFLSVNQIGDTGAQAIAASLKVNKMLTTLNLRATQIGDTGAQAIGEGL 323

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           + N T++ LDL  N + D                                   + +A++ 
Sbjct: 324 KVNKTLTSLDLSFNRVGDA--------------------------------AVRAIAEAL 351

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           KV N  +T + L +N+I D GA AIA+ALK N+ V    L L  N +++ G +AL
Sbjct: 352 KV-NTVVTELYLYYNQIGDAGAQAIAEALKVNKTVMF--LKLDRNVISETGSNAL 403



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 173/380 (45%), Gaps = 61/380 (16%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D  A+AIAE LK N  L  L L  N I  +G  ++AEAL  N T+  L LN N  G  GA
Sbjct: 34  DAEAQAIAEALKVNRRLTELNLGWNQIGDAGAKAIAEALKVNRTVTVLGLNENQIGDAGA 93

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS-------RKGKLAVLDIGNNSIS 372
             +A+ L+ N  L  L L  N I + GI  L    ++       R+       + +++  
Sbjct: 94  EVIAETLKVNDRLSVLSLDNNFIAEHGINRLKQVGNTACNPALERQHPPPPAQLQSHAAH 153

Query: 373 AK-------GAFHVAEYIKNC--KSLLW----------INLYMNDIGDEGAEKIADALKQ 413
           AK        +  VA   +N   +   W          +NL    I D GA+ IA+ L+ 
Sbjct: 154 AKFQANVSTESPQVARSTENVTQRQHQWYDKVKNASERLNLCTKQIDDAGAQTIAETLQL 213

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N T+  +DL  N I   GA AI+  LK N+ +  +DL  N IG  GA+A++  LK +   
Sbjct: 214 NTTVRKLDLSNNQIADAGAQAISEALKVNTTMNHIDLGGNLIGEAGAQAIAGALKVNTTP 273

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
             L L   QIG +GA+ +A  L+ N  ++ L+LRA  + D                    
Sbjct: 274 TFLFLSVNQIGDTGAQAIAASLKVNKMLTTLNLRATQIGDT------------------- 314

Query: 534 HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 593
                        GA+ + +  KV N+ LTS+DL+FN + D    AIA+ALK N    VT
Sbjct: 315 -------------GAQAIGEGLKV-NKTLTSLDLSFNRVGDAAVRAIAEALKVN--TVVT 358

Query: 594 SLNLANNFLTKFGQSALTDA 613
            L L  N +   G  A+ +A
Sbjct: 359 ELYLYYNQIGDAGAQAIAEA 378



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 175/382 (45%), Gaps = 30/382 (7%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  R  + +++     GD G   +AE+L  N+T   +    N I  AG +   
Sbjct: 38  QAIAEALKVNRRLTELNLGWNQIGDAGAKAIAEALKVNRTVTVLGLNENQIGDAGAEVIA 97

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDI--LVDNAGVERLQ-LSSVDLRDEGAKA--- 265
             L+ N  L  L+L  N I + G+  L  +     N  +ER        L+   A A   
Sbjct: 98  ETLKVNDRLSVLSLDNNFIAEHGINRLKQVGNTACNPALERQHPPPPAQLQSHAAHAKFQ 157

Query: 266 ---------IAELLKN-------------NSILRVLELNNNMIDYSGFTSLAEALLENST 303
                    +A   +N             N+  R L L    ID +G  ++AE L  N+T
Sbjct: 158 ANVSTESPQVARSTENVTQRQHQWYDKVKNASER-LNLCTKQIDDAGAQTIAETLQLNTT 216

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +R L L+ N     GA A+++ L+ N ++  + L GN IG+ G +A+   L         
Sbjct: 217 VRKLDLSNNQIADAGAQAISEALKVNTTMNHIDLGGNLIGEAGAQAIAGALKVNTTP-TF 275

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  N I   GA  +A  +K  K L  +NL    IGD GA+ I + LK N+T+T++DL 
Sbjct: 276 LFLSVNQIGDTGAQAIAASLKVNKMLTTLNLRATQIGDTGAQAIGEGLKVNKTLTSLDLS 335

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N +      AIA  LK N+V+T L L YN IG  GA+A++E LK +  +  LKL    I
Sbjct: 336 FNRVGDAAVRAIAEALKVNTVVTELYLYYNQIGDAGAQAIAEALKVNKTVMFLKLDRNVI 395

Query: 484 GASGAEFVADMLRYNNTISILD 505
             +G+  +  +      +SIL+
Sbjct: 396 SETGSNALQQVGNKTCNLSILN 417



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 28/259 (10%)

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            V + +KN     W +L+    GD  A+ IA+ALK NR +T ++LG N I   GA AIA 
Sbjct: 13  EVYDIVKNASQ--WFSLHERQYGDAEAQAIAEALKVNRRLTELNLGWNQIGDAGAKAIAE 70

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL--------GWCQIGASGAE 489
            LK N  +T L L  N IG  GA+ ++E LK +  ++ L L        G  ++   G  
Sbjct: 71  ALKVNRTVTVLGLNENQIGDAGAEVIAETLKVNDRLSVLSLDNNFIAEHGINRLKQVGNT 130

Query: 490 FVADMLRYNNTISILDLRANG----LRDEVCSGCNGLSFFHSAIYSLKHMLF-------- 537
                L   +      L+++      +  V +    ++     +   +H  +        
Sbjct: 131 ACNPALERQHPPPPAQLQSHAAHAKFQANVSTESPQVARSTENVTQRQHQWYDKVKNASE 190

Query: 538 -YSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
             +LC   +   GA+ +A++ + +N  +  +DL+ N+I D GA AI++ALK N    +  
Sbjct: 191 RLNLCTKQIDDAGAQTIAETLQ-LNTTVRKLDLSNNQIADAGAQAISEALKVN--TTMNH 247

Query: 595 LNLANNFLTKFGQSALTDA 613
           ++L  N + + G  A+  A
Sbjct: 248 IDLGGNLIGEAGAQAIAGA 266


>gi|320165491|gb|EFW42390.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 836

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 173/366 (47%), Gaps = 3/366 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
            FR + +    FA + ++  SV++      D     +AE L  N   + ++   N I   
Sbjct: 2   FFRRTSRQRALFA-QAKSSRSVELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDK 60

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G KA    L++   L  L L GN IGD G + + + +     +  L L    + D GA+A
Sbjct: 61  GAKAIGSALRNKRILSGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQA 120

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           I   L+N   L  L L  N I  +G  ++AE LL ++ +  L +  N  G  GA A+   
Sbjct: 121 IGLALRNKPKLSTLFLFENSIGDTGARAIAEGLLASTALTDLRMYDNQIGDAGAQAIGSA 180

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L    +L  LHL+ N IGD G RA+  GL+S    L  L +  N I   GA  +   ++N
Sbjct: 181 LRNKTNLSSLHLNTNKIGDIGARAIAEGLTST--ALTQLGMHTNEIGEAGARAIGTALRN 238

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L    L  N+IGD GA  IA+ L+ +  +T + +    I   GA AI   L++   +
Sbjct: 239 KANLSKFYLSKNNIGDAGASAIAEGLQTSSALTDLRMNATQIGDTGAQAIGFALRNKPNL 298

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           ++L +  N I   GA+A++E LK    +  L +   QIG  GA+ +   L+    +S L+
Sbjct: 299 SALGVDTNKITDAGARAIAEGLKTSTALTQLAMNANQIGDVGAQAIGSALQSKVFLSKLN 358

Query: 506 LRANGL 511
           +  N +
Sbjct: 359 VSDNQI 364



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 2/300 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L+TLNL+ N IGD+G K +   L +   +  L L    + D GA+AIAE +K  
Sbjct: 41  LKANSNLQTLNLNDNQIGDKGAKAIGSALRNKRILSGLYLGGNSIGDAGARAIAEAVKTA 100

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L L  N ID +G  ++  AL     + +L L  N  G  GA A+A+GL  + +L 
Sbjct: 101 PEMTHLWLYKNQIDDAGAQAIGLALRNKPKLSTLFLFENSIGDTGARAIAEGLLASTALT 160

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           +L ++ N IGD G +A+ S L + K  L+ L +  N I   GA  +AE + +  +L  + 
Sbjct: 161 DLRMYDNQIGDAGAQAIGSALRN-KTNLSSLHLNTNKIGDIGARAIAEGLTST-ALTQLG 218

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           ++ N+IG+ GA  I  AL+    ++   L  NNI   GASAIA  L+ +S +T L +   
Sbjct: 219 MHTNEIGEAGARAIGTALRNKANLSKFYLSKNNIGDAGASAIAEGLQTSSALTDLRMNAT 278

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A+   L+   N++ L +   +I  +GA  +A+ L+ +  ++ L + AN + D
Sbjct: 279 QIGDTGAQAIGFALRNKPNLSALGVDTNKITDAGARAIAEGLKTSTALTQLAMNANQIGD 338



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 189/356 (53%), Gaps = 15/356 (4%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++L + ++ D  A  IAE LK NS L+ L LN+N I   G  ++  AL     +  L+L 
Sbjct: 22  VELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDKGAKAIGSALRNKRILSGLYLG 81

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR-KGKLAVLDIGNN 369
           GN  G  GA A+A+ ++    +  L L+ N I D G +A+  GL+ R K KL+ L +  N
Sbjct: 82  GNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQAI--GLALRNKPKLSTLFLFEN 139

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           SI   GA  +AE +    +L  + +Y N IGD GA+ I  AL+    ++++ L  N I  
Sbjct: 140 SIGDTGARAIAEGLLASTALTDLRMYDNQIGDAGAQAIGSALRNKTNLSSLHLNTNKIGD 199

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA AIA  L  ++ +T L +  N IG  GA+A+   L+   N++   L    IG +GA 
Sbjct: 200 IGARAIAEGLT-STALTQLGMHTNEIGEAGARAIGTALRNKANLSKFYLSKNNIGDAGAS 258

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--G 547
            +A+ L+ ++ ++ L + A  + D   +G   + F   A+ +  ++    +  N +   G
Sbjct: 259 AIAEGLQTSSALTDLRMNATQIGD---TGAQAIGF---ALRNKPNLSALGVDTNKITDAG 312

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
           A+ +A+  K  + ALT + +  N+I D GA AI  AL++   V ++ LN+++N ++
Sbjct: 313 ARAIAEGLKT-STALTQLAMNANQIGDVGAQAIGSALQSK--VFLSKLNVSDNQIS 365



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 41/285 (14%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           KS R + L  + I D     +  GL +    L  L++ +N I  KGA  +   ++N + L
Sbjct: 17  KSSRSVELQNSEITDADALVIAEGLKA-NSNLQTLNLNDNQIGDKGAKAIGSALRNKRIL 75

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L  N IGD GA  IA+A+K    +T + L  N I   GA AI   L++   +++L 
Sbjct: 76  SGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQAIGLALRNKPKLSTLF 135

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  GA+A++E L     +  L++   QIG +GA+ +   LR    +S L L  N
Sbjct: 136 LFENSIGDTGARAIAEGLLASTALTDLRMYDNQIGDAGAQAIGSALRNKTNLSSLHLNTN 195

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF 569
            + D                                 GA+ +A+     + ALT + +  
Sbjct: 196 KIGD--------------------------------IGARAIAEGL--TSTALTQLGMHT 221

Query: 570 NEIRDDGAFAIAQAL--KANEDVAVTSLNLANNFLTKFGQSALTD 612
           NEI + GA AI  AL  KAN    ++   L+ N +   G SA+ +
Sbjct: 222 NEIGEAGARAIGTALRNKAN----LSKFYLSKNNIGDAGASAIAE 262



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 3/194 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            SS+ ++    GD G   +AE  G   TA  ++    N I  AG +A    L++   L  
Sbjct: 187 LSSLHLNTNKIGDIGARAIAE--GLTSTALTQLGMHTNEIGEAGARAIGTALRNKANLSK 244

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
             LS N IGD G   + + L  ++ +  L++++  + D GA+AI   L+N   L  L ++
Sbjct: 245 FYLSKNNIGDAGASAIAEGLQTSSALTDLRMNATQIGDTGAQAIGFALRNKPNLSALGVD 304

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AE L  ++ +  L +N N  G +GA A+   L+    L +L++  N I
Sbjct: 305 TNKITDAGARAIAEGLKTSTALTQLAMNANQIGDVGAQAIGSALQSKVFLSKLNVSDNQI 364

Query: 343 GDEGIRALMSGLSS 356
               ++ L S + S
Sbjct: 365 SSSAVQFLSSCVPS 378



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 7/200 (3%)

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           Q ++  +++L  + I    A  IA  LK NS + +L+L  N IG  GAKA+   L+    
Sbjct: 15  QAKSSRSVELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDKGAKAIGSALRNKRI 74

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           ++ L LG   IG +GA  +A+ ++    ++ L L  N + D   +G   +         L
Sbjct: 75  LSGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDD---AGAQAIGLALRNKPKL 131

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
             +  +   I    GA+ +A+   + + ALT + +  N+I D GA AI  AL+   +  +
Sbjct: 132 STLFLFENSIGDT-GARAIAEGL-LASTALTDLRMYDNQIGDAGAQAIGSALRNKTN--L 187

Query: 593 TSLNLANNFLTKFGQSALTD 612
           +SL+L  N +   G  A+ +
Sbjct: 188 SSLHLNTNKIGDIGARAIAE 207


>gi|320168401|gb|EFW45300.1| hypothetical protein CAOG_03306 [Capsaspora owczarzaki ATCC 30864]
          Length = 440

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/253 (38%), Positives = 139/253 (54%), Gaps = 9/253 (3%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L +N I   G  ++AEAL  N+T+   +L+ N  G  GA A+A+ L+ +K L EL L GN
Sbjct: 7   LGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDAGAQAIAEALK-DKPLAELKLGGN 65

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G RA+   L   K  L  L++G+N I   GA+ +AE +K  K+L  +    N IG
Sbjct: 66  RIGDAGARAIAEALKVNK-TLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPIG 124

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D GA+ +A+AL  N+T+T + L  + I   GA AIA  LK N  +T LDL  N IG  GA
Sbjct: 125 DVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVGA 184

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR-------D 513
           +A++E LK +  +  L L   +IG +GA  +A+ L  N T++ L L  N +         
Sbjct: 185 QAVAEALKVNKTLTRLSLSCNRIGDAGAVAIAEALTVNKTLTELYLTYNCISVLGSEAIY 244

Query: 514 EVCSGCNGLSFFH 526
             C+G   L  FH
Sbjct: 245 RACTGKRRLQAFH 257



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/264 (37%), Positives = 141/264 (53%), Gaps = 10/264 (3%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           +T  L  N IGD G   + + L  N  +    L S  + D GA+AIAE LK+   L  L+
Sbjct: 3   ETDRLGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDAGAQAIAEALKDKP-LAELK 61

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I  +G  ++AEAL  N T+  L L  N  G  GA A+A+ L+ NK+L +L    N
Sbjct: 62  LGGNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDN 121

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G +A+   L+  K  L  L + ++ I   GA  +AE +K  K+L  ++L  N IG
Sbjct: 122 PIGDVGAQAVAEALTVNK-TLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIG 180

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D GA+ +A+ALK N+T+T + L  N I   GA AIA  L  N  +T L L YN I   G+
Sbjct: 181 DVGAQAVAEALKVNKTLTRLSLSCNRIGDAGAVAIAEALTVNKTLTELYLTYNCISVLGS 240

Query: 461 KAL-------SEVLKFHGN-INTL 476
           +A+         +  FHG+ +N L
Sbjct: 241 EAIYRACTGKRRLQAFHGSRVNPL 264



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 138/278 (49%), Gaps = 37/278 (13%)

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IGD G  A+   L      L    + +N I   GA  +AE +K+ K L  + L 
Sbjct: 6   RLGSNRIGDGGAWAIAEALKVNT-TLTWFYLDSNQIGDAGAQAIAEALKD-KPLAELKLG 63

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GA  IA+ALK N+T+T ++LG N I   GA AIA  LK N  +T L+   NPI
Sbjct: 64  GNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPI 123

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           G  GA+A++E L  +  +  L L   QIG +GA  +A+ L+ N T++ LDL  N + D  
Sbjct: 124 GDVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGD-- 181

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
                                          GA+ +A++ KV N+ LT + L+ N I D 
Sbjct: 182 ------------------------------VGAQAVAEALKV-NKTLTRLSLSCNRIGDA 210

Query: 576 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           GA AIA+AL  N+   +T L L  N ++  G  A+  A
Sbjct: 211 GAVAIAEALTVNK--TLTELYLTYNCISVLGSEAIYRA 246



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 131/275 (47%), Gaps = 31/275 (11%)

Query: 164 FSSVDMSGRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
               D  G N  GD G + +AE+L  N T       +N I  AG +A    L+    L  
Sbjct: 1   MEETDRLGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDAGAQAIAEALKDK-PLAE 59

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L GN IGD                             GA+AIAE LK N  L  LEL 
Sbjct: 60  LKLGGNRIGD----------------------------AGARAIAEALKVNKTLTQLELG 91

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G  ++AEAL  N T+  L    N  G +GA A+A+ L  NK+L  L L  + I
Sbjct: 92  SNRIGDGGAWAIAEALKVNKTLTQLEFGDNPIGDVGAQAVAEALTVNKTLTRLSLWSSQI 151

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G RA+   L   K  L  LD+G+N I   GA  VAE +K  K+L  ++L  N IGD 
Sbjct: 152 GDAGARAIAEALKVNK-TLTQLDLGDNQIGDVGAQAVAEALKVNKTLTRLSLSCNRIGDA 210

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           GA  IA+AL  N+T+T + L  N I   G+ AI R
Sbjct: 211 GAVAIAEALTVNKTLTELYLTYNCISVLGSEAIYR 245



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 1/207 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K+ +  + + + G   GD G   +AE+L  N+T  ++   +N I   G  A  
Sbjct: 46  QAIAEALKD-KPLAELKLGGNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIA 104

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L    NPIGD G + + + L  N  + RL L S  + D GA+AIAE LK
Sbjct: 105 EALKVNKTLTQLEFGDNPIGDVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALK 164

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L +N I   G  ++AEAL  N T+  L L+ N  G  GA A+A+ L  NK+
Sbjct: 165 VNKTLTQLDLGDNQIGDVGAQAVAEALKVNKTLTRLSLSCNRIGDAGAVAIAEALTVNKT 224

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRK 358
           L EL+L  N I   G  A+    + ++
Sbjct: 225 LTELYLTYNCISVLGSEAIYRACTGKR 251



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 89/175 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +++     GD G + +AE+L  N+T  ++ F  N I   G +A    L  N  L 
Sbjct: 83  KTLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPIGDVGAQAVAEALTVNKTLT 142

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  + IGD G + + + L  N  + +L L    + D GA+A+AE LK N  L  L L
Sbjct: 143 RLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVGAQAVAEALKVNKTLTRLSL 202

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           + N I  +G  ++AEAL  N T+  L+L  N    LG+ A+ +   G + L+  H
Sbjct: 203 SCNRIGDAGAVAIAEALTVNKTLTELYLTYNCISVLGSEAIYRACTGKRRLQAFH 257



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 12/141 (8%)

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           T +LG  +IG  GA  +A+ L+ N T++   L +N + D       G      A+   K 
Sbjct: 4   TDRLGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDA------GAQAIAEALKD-KP 56

Query: 535 MLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
           +    L  N +   GA+ +A++ K VN+ LT ++L  N I D GA+AIA+ALK N+   +
Sbjct: 57  LAELKLGGNRIGDAGARAIAEALK-VNKTLTQLELGSNRIGDGGAWAIAEALKVNK--TL 113

Query: 593 TSLNLANNFLTKFGQSALTDA 613
           T L   +N +   G  A+ +A
Sbjct: 114 TQLEFGDNPIGDVGAQAVAEA 134


>gi|320165451|gb|EFW42350.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 460

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 134/235 (57%), Gaps = 7/235 (2%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T  SL L+ N  G  GA A+A+ L+ NK+L  L L+ N IG+ G +A+   
Sbjct: 40  IAEALKVNTTATSLDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEA 99

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L     +LA LD+G N I   GA  +AE +K  K+L  ++L  N IG  GA+ IAD LK 
Sbjct: 100 LKVNT-RLAYLDLGLNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKV 158

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N T+T++ L  N I   GA AIA  LK N  ++ LDL  N IG  GA A++E LK +  +
Sbjct: 159 NETVTSLHLQENQIGDVGAHAIAEALKVNKTLSWLDLDINEIGDVGAHAIAEALKANTAV 218

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
             L L   QIG++GA+ +A+ L+ N  ++ LD+  N      C G  GL  F  A
Sbjct: 219 TALHLEENQIGSTGAQEIAEALKVNTRLAFLDVHLN------CIGNAGLQAFDEA 267



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 140/251 (55%), Gaps = 2/251 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L++  V++ D  A+ IAE LK N+    L+L+ N I  +G  ++AEAL  N T+  L LN
Sbjct: 25  LEVRCVEIGDTEAQIIAEALKVNTTATSLDLSENQIGDAGALAIAEALKVNKTLFWLSLN 84

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  GA A+A+ L+ N  L  L L  N IG  G + +   L   K  L+ L + +N 
Sbjct: 85  ENQIGEAGAQAIAEALKVNTRLAYLDLGLNQIGVAGAQIIAEALKVNK-TLSSLSLIDNQ 143

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  +A+ +K  +++  ++L  N IGD GA  IA+ALK N+T++ +DL  N I   
Sbjct: 144 IGGAGAQAIADTLKVNETVTSLHLQENQIGDVGAHAIAEALKVNKTLSWLDLDINEIGDV 203

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  LK N+ +T+L L  N IG+ GA+ ++E LK +  +  L +    IG +G + 
Sbjct: 204 GAHAIAEALKANTAVTALHLEENQIGSTGAQEIAEALKVNTRLAFLDVHLNCIGNAGLQA 263

Query: 491 VADMLRYNNTI 501
             D  R+ N I
Sbjct: 264 F-DEARHVNRI 273



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 127/251 (50%), Gaps = 35/251 (13%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N I   GA  +AE +K  K+L W++L  N IG+ GA+ IA+ALK N  +  +DLG
Sbjct: 53  LDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLDLG 112

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA  IA  LK N  ++SL L  N IG  GA+A+++ LK +  + +L L   QI
Sbjct: 113 LNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVNETVTSLHLQENQI 172

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G  GA  +A+ L+ N T+S LDL  N + D                              
Sbjct: 173 GDVGAHAIAEALKVNKTLSWLDLDINEIGD------------------------------ 202

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
              GA  +A++ K  N A+T++ L  N+I   GA  IA+ALK N  +A   ++L  N + 
Sbjct: 203 --VGAHAIAEALK-ANTAVTALHLEENQIGSTGAQEIAEALKVNTRLAFLDVHL--NCIG 257

Query: 604 KFGQSALTDAK 614
             G  A  +A+
Sbjct: 258 NAGLQAFDEAR 268



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 139/276 (50%), Gaps = 6/276 (2%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S Q + E  +EL      A   +++     GD     +AE+L  N TA  +  + N I  
Sbjct: 3   SYQNMTERQRELYDKVKNARDYLEVRCVEIGDTEAQIIAEALKVNTTATSLDLSENQIGD 62

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N  L  L+L+ N IG+ G + + + L  N  +  L L    +   GA+
Sbjct: 63  AGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLDLGLNQIGVAGAQ 122

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            IAE LK N  L  L L +N I  +G  ++A+ L  N T+ SLHL  N  G +GA+A+A+
Sbjct: 123 IIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVNETVTSLHLQENQIGDVGAHAIAE 182

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ NK+L  L L  N IGD G  A+   L +     A L +  N I + GA  +AE +K
Sbjct: 183 ALKVNKTLSWLDLDINEIGDVGAHAIAEALKANTAVTA-LHLEENQIGSTGAQEIAEALK 241

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
               L ++++++N IG+ G +   +A   NR + T+
Sbjct: 242 VNTRLAFLDVHLNCIGNAGLQAFDEARHVNRILKTL 277



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 126/233 (54%), Gaps = 13/233 (5%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN +  L +     +IGD  A+ IA+ALK N T T++DL  N I   GA AIA  LK N
Sbjct: 18  VKNARDYLEVRCV--EIGDTEAQIIAEALKVNTTATSLDLSENQIGDAGALAIAEALKVN 75

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  L L  N IG  GA+A++E LK +  +  L LG  QIG +GA+ +A+ L+ N T+S
Sbjct: 76  KTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLDLGLNQIGVAGAQIIAEALKVNKTLS 135

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNE 560
            L L  N +      G  G       +   + +    L  N +   GA  +A++ K VN+
Sbjct: 136 SLSLIDNQI------GGAGAQAIADTLKVNETVTSLHLQENQIGDVGAHAIAEALK-VNK 188

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            L+ +DL  NEI D GA AIA+ALKAN   AVT+L+L  N +   G   + +A
Sbjct: 189 TLSWLDLDINEIGDVGAHAIAEALKAN--TAVTALHLEENQIGSTGAQEIAEA 239



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 118/238 (49%), Gaps = 3/238 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +S+D+S    GD G   +AE+L  N+T   +S   N I  AG +A    L+ N  L  L+
Sbjct: 51  TSLDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLD 110

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG  G + + + L  N  +  L L    +   GA+AIA+ LK N  +  L L  N
Sbjct: 111 LGLNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVNETVTSLHLQEN 170

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  ++AEAL  N T+  L L+ N  G +GA+A+A+ L+ N ++  LHL  N IG 
Sbjct: 171 QIGDVGAHAIAEALKVNKTLSWLDLDINEIGDVGAHAIAEALKANTAVTALHLEENQIGS 230

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKG--AFHVAEYIKNCKSLLWINLYMNDIG 400
            G + +   L     +LA LD+  N I   G  AF  A ++      L I+  +N + 
Sbjct: 231 TGAQEIAEALKVNT-RLAFLDVHLNCIGNAGLQAFDEARHVNRILKTLLIDKQINPLA 287


>gi|218675766|gb|AAI69297.2| NOD3 protein [synthetic construct]
          Length = 311

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/311 (36%), Positives = 167/311 (53%), Gaps = 10/311 (3%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ N+ L  L L 
Sbjct: 1   LHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQ 60

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +L  ++L  N 
Sbjct: 61  SNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANSTLKNLDLTANL 119

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSLDL  N IG D
Sbjct: 120 LHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDD 179

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR N +      G
Sbjct: 180 GACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAI------G 233

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
             G     +A+     +   +L  N L   GA C+A +    N  L  I+L  N I D G
Sbjct: 234 VAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALS-GNHRLQHINLQGNHIGDSG 292

Query: 577 AFAIAQALKAN 587
           A  I++A+K N
Sbjct: 293 ARMISEAIKTN 303



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 162/325 (49%), Gaps = 29/325 (8%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G  G   +A++L  N++ +E+ F++N I   G KA    L+ N  L++L+L  N I D 
Sbjct: 8   IGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDA 67

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           GV  L   L  N  +  L L    +  EGA+AIA  L  NS L+ L+L  N++   G  +
Sbjct: 68  GVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARA 127

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A A+ EN T+ SLHL  N+  A  A AL + L+ N+SL  L L  N+IGD+        
Sbjct: 128 IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDD-------- 179

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                GA  VA  +K   +L  + L +  IG  GA+ + +AL  
Sbjct: 180 ---------------------GACAVARALKVNTALTALYLQVASIGASGAQVLGEALAV 218

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA  ++  L  +  +
Sbjct: 219 NRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRL 278

Query: 474 NTLKLGWCQIGASGAEFVADMLRYN 498
             + L    IG SGA  +++ ++ N
Sbjct: 279 QHINLQGNHIGDSGARMISEAIKTN 303



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 1/299 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +  K+ R+   +  S  + GD G   LAE+L  NQ  E +   +N I+ AG+ A  
Sbjct: 14  QRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALM 73

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G L +N  L +L+L  N I  EG + +   L  N+ ++ L L++  L D+GA+AIA  ++
Sbjct: 74  GALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVR 133

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA A+A+ L+ N +
Sbjct: 134 ENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTA 193

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L   SIG  G + L   L+  +  L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 194 LTALYLQVASIGASGAQVLGEALAVNR-TLEILDLRGNAIGVAGAKALANALKVNSSLRR 252

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           +NL  N +G +GA  IA AL  N  +  I+L GN+I   GA  I+  +K N+   ++++
Sbjct: 253 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 311



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 148/296 (50%), Gaps = 36/296 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           LHL  N  G +GA  +A  L+ N+SL+EL    NSIGD G +AL   L   +G L  LD+
Sbjct: 1   LHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQG-LESLDL 59

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
            +NSIS  G   +   +   ++LL ++L  N I  EGA+ IA AL  N T+  +DL  N 
Sbjct: 60  QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANL 119

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           +H +GA AIA  +++N  +TSL L +N I A  A+AL + L+ + ++ +L L    IG  
Sbjct: 120 LHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDD 179

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ 546
           GA  VA  L+ N  ++ L L+   +         G S                       
Sbjct: 180 GACAVARALKVNTALTALYLQVASI---------GAS----------------------- 207

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
           GA+ L ++   VN  L  +DL  N I   GA A+A ALK N   ++  LNL  N L
Sbjct: 208 GAQVLGEAL-AVNRTLEILDLRGNAIGVAGAKALANALKVNS--SLRRLNLQENSL 260


>gi|320164298|gb|EFW41197.1| hypothetical protein CAOG_06329 [Capsaspora owczarzaki ATCC 30864]
          Length = 543

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 189/361 (52%), Gaps = 10/361 (2%)

Query: 152 QTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           Q +N+  +EL      A   + +SG+  GD     +AE+L  N+T  +++   N I AAG
Sbjct: 4   QYMNQKQRELYDQVKNASEGLSLSGKQIGDAEAQAIAEALKVNKTLHKLNLDRNQIGAAG 63

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +A   ++Q N A+  L L+ N IG  G   + + L  N  +  L L    + D GA AI
Sbjct: 64  AQA---IVQVNTAVTKLMLNQNRIGGAGAHAIAEALKVNTTLTWLDLWVNQIGDAGAWAI 120

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE LK N+ L  L L+ N +  +G  ++AEAL  N+T+ SL LN N  G +GA A+A+ L
Sbjct: 121 AEALKVNTTLTWLGLHANQVGEAGAGAIAEALKVNTTLTSLGLNKNQIGDVGAGAIAEAL 180

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           + NK+L  L LH N +G+ G  A+   L      L  L +  N I   GA  +A  +K  
Sbjct: 181 KVNKTLIRLGLHANQVGEAGAGAIAEALKGNT-TLTSLGLEFNQIGDAGACAIAAALKVN 239

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           K+L  + L  N IGD GA+ IADALK N T+T + L  N I   G+ A A  L+ N  + 
Sbjct: 240 KTLTALFLNSNQIGDAGAQAIADALKVNTTMTGLYLERNQIGGAGSQAFAEALRVNKTLI 299

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            L L +N IG  GA A++E LK +  +  L L    IG  G++ + D  R  N    +DL
Sbjct: 300 KLRLEFNQIGDAGACAIAEALKVNKTVMLLDLTSNCIGNLGSQAI-DEARKGNCGCEVDL 358

Query: 507 R 507
           R
Sbjct: 359 R 359



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 127/347 (36%), Positives = 180/347 (51%), Gaps = 14/347 (4%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V NA  E L LS   + D  A+AIAE LK N  L  L L+ N I  +G  ++ +    N+
Sbjct: 17  VKNAS-EGLSLSGKQIGDAEAQAIAEALKVNKTLHKLNLDRNQIGAAGAQAIVQV---NT 72

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            +  L LN N  G  GA+A+A+ L+ N +L  L L  N IGD G  A+   L      L 
Sbjct: 73  AVTKLMLNQNRIGGAGAHAIAEALKVNTTLTWLDLWVNQIGDAGAWAIAEALKVNT-TLT 131

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +  N +   GA  +AE +K   +L  + L  N IGD GA  IA+ALK N+T+  + L
Sbjct: 132 WLGLHANQVGEAGAGAIAEALKVNTTLTSLGLNKNQIGDVGAGAIAEALKVNKTLIRLGL 191

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N +   GA AIA  LK N+ +TSL L +N IG  GA A++  LK +  +  L L   Q
Sbjct: 192 HANQVGEAGAGAIAEALKGNTTLTSLGLEFNQIGDAGACAIAAALKVNKTLTALFLNSNQ 251

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           IG +GA+ +AD L+ N T++ L L  N +      G  G   F  A+   K ++   L  
Sbjct: 252 IGDAGAQAIADALKVNTTMTGLYLERNQI------GGAGSQAFAEALRVNKTLIKLRLEF 305

Query: 543 NYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           N +   GA  +A++ KV N+ +  +DL  N I + G+ AI +A K N
Sbjct: 306 NQIGDAGACAIAEALKV-NKTVMLLDLTSNCIGNLGSQAIDEARKGN 351



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 173/338 (51%), Gaps = 43/338 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L+G   G   A A+A+ L+ NK+L +L+L  N IG  G +A++  +++   KL    +
Sbjct: 24  LSLSGKQIGDAEAQAIAEALKVNKTLHKLNLDRNQIGAAGAQAIVQ-VNTAVTKLM---L 79

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
             N I   GA  +AE +K   +L W++L++N IGD GA  IA+ALK N T+T + L  N 
Sbjct: 80  NQNRIGGAGAHAIAEALKVNTTLTWLDLWVNQIGDAGAWAIAEALKVNTTLTWLGLHANQ 139

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK---------FHGN----- 472
           +   GA AIA  LK N+ +TSL L  N IG  GA A++E LK          H N     
Sbjct: 140 VGEAGAGAIAEALKVNTTLTSLGLNKNQIGDVGAGAIAEALKVNKTLIRLGLHANQVGEA 199

Query: 473 --------------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
                         + +L L + QIG +GA  +A  L+ N T++ L L +N + D     
Sbjct: 200 GAGAIAEALKGNTTLTSLGLEFNQIGDAGACAIAAALKVNKTLTALFLNSNQIGDA---- 255

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGA--KCLAQSFKVVNEALTSIDLAFNEIRDDG 576
             G      A+     M    L  N + GA  +  A++ + VN+ L  + L FN+I D G
Sbjct: 256 --GAQAIADALKVNTTMTGLYLERNQIGGAGSQAFAEALR-VNKTLIKLRLEFNQIGDAG 312

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
           A AIA+ALK N+ V +  L+L +N +   G  A+ +A+
Sbjct: 313 ACAIAEALKVNKTVML--LDLTSNCIGNLGSQAIDEAR 348


>gi|406943965|gb|EKD75840.1| hypothetical protein ACD_44C00009G0001 [uncultured bacterium]
          Length = 773

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 221/481 (45%), Gaps = 67/481 (13%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           E +  ++++L  N T + ++  +N +   G  A   + + N  +  LN++ N I DEG +
Sbjct: 292 EAVRLISQALERNNTIQVLNLVSNHMGNVGAMALARLFEFNHTITELNINNNQISDEGAQ 351

Query: 237 CLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
            + +IL  +N  + +L L+   + DEGA A A LL+NN+ L  L+L++N I   G   +A
Sbjct: 352 VIAEILSRNNCAITKLSLAVNLIGDEGAIACASLLENNTSLTRLDLSSNRIGVLGAGPVA 411

Query: 296 EALLENSTIRSLHLNGNYGGAL----------------------------GANALAKGLE 327
            A ++N+T+R+L    N  G                              GA  L K L 
Sbjct: 412 RAFIKNNTLRTLIFTRNNAGPRTAEIFAEALVVNLSLESLDLRENQLDREGAVVLGKKLN 471

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N S++ L+L  N IG EG+  L          +  L++ NN I  +G   +   ++   
Sbjct: 472 LNISVKRLNLGWNGIGSEGVAGLAEAFY-ENACIQELNLQNNGIEVEGGIPLFRALEANT 530

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           SL+ +++  N++GD+  + +A  + +N ++ T++   N I ++GA A+A+ L  NS +T 
Sbjct: 531 SLVVLDISHNELGDDDIKILAPVISKNSSLKTLEFCSNAITAQGARALAKALVVNSSVTE 590

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L  N IG  G KAL++ L+ + ++  L L   ++G  GA+ +   L  N T++ L L 
Sbjct: 591 LGLGVNNIGDRGTKALAKALRQNTSLKILTLEASEVGDGGAQVLGKALLCNCTLTTLRLN 650

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            N L                                  QGAK L ++ +  N +LTS++L
Sbjct: 651 KNNLSK--------------------------------QGAKSLIKALE-HNASLTSLEL 677

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLA---NNFLTKFGQSALTDAKDLVYEMSEKE 624
           A N + D G  A  + L  N  +    L+LA     +L +  Q    +A   V  MS   
Sbjct: 678 AKNNLGDIGN-AFIRLLGRNHTLTTLELSLAFVDRPYLKRISQLLERNASFQVQAMSPAN 736

Query: 625 V 625
           V
Sbjct: 737 V 737



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 215/442 (48%), Gaps = 23/442 (5%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           +NF D     L+  L  N +  E++F  NG+    ++     L+ N  ++ LNL  N +G
Sbjct: 265 KNFSD-----LSVILEENSSMTELNFY-NGLDVEAVRLISQALERNNTIQVLNLVSNHMG 318

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSG 290
           + G   L  +   N  +  L +++  + DEGA+ IAE+L +NN  +  L L  N+I   G
Sbjct: 319 NVGAMALARLFEFNHTITELNINNNQISDEGAQVIAEILSRNNCAITKLSLAVNLIGDEG 378

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG---- 346
             + A  L  N+++  L L+ N  G LGA  +A+    N +LR L    N+ G       
Sbjct: 379 AIACASLLENNTSLTRLDLSSNRIGVLGAGPVARAFIKNNTLRTLIFTRNNAGPRTAEIF 438

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             AL+  LS     L  LD+  N +  +GA  + + +    S+  +NL  N IG EG   
Sbjct: 439 AEALVVNLS-----LESLDLRENQLDREGAVVLGKKLNLNISVKRLNLGWNGIGSEGVAG 493

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +A+A  +N  I  ++L  N I  +G   + R L+ N+ +  LD+++N +G D  K L+ V
Sbjct: 494 LAEAFYENACIQELNLQNNGIEVEGGIPLFRALEANTSLVVLDISHNELGDDDIKILAPV 553

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           +  + ++ TL+     I A GA  +A  L  N++++ L L  N + D    G   L+   
Sbjct: 554 ISKNSSLKTLEFCSNAITAQGARALAKALVVNSSVTELGLGVNNIGDR---GTKALAKAL 610

Query: 527 SAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
               SLK +   +  +    GA+ L ++  + N  LT++ L  N +   GA ++ +AL+ 
Sbjct: 611 RQNTSLKILTLEASEVGD-GGAQVLGKAL-LCNCTLTTLRLNKNNLSKQGAKSLIKALEH 668

Query: 587 NEDVAVTSLNLANNFLTKFGQS 608
           N   ++TSL LA N L   G +
Sbjct: 669 N--ASLTSLELAKNNLGDIGNA 688



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 158/331 (47%), Gaps = 30/331 (9%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N G       AE+L  N + E +    N +   G       L  NI++K LNL  N IG 
Sbjct: 429 NAGPRTAEIFAEALVVNLSLESLDLRENQLDREGAVVLGKKLNLNISVKRLNLGWNGIGS 488

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EGV  L +   +NA ++ L L +  +  EG   +   L+ N+ L VL++++N +      
Sbjct: 489 EGVAGLAEAFYENACIQELNLQNNGIEVEGGIPLFRALEANTSLVVLDISHNELGDDDIK 548

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            LA  + +NS++++L    N   A GA ALAK L  N S+ EL L  N+IGD G +AL  
Sbjct: 549 ILAPVISKNSSLKTLEFCSNAITAQGARALAKALVVNSSVTELGLGVNNIGDRGTKAL-- 606

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                                      A+ ++   SL  + L  +++GD GA+ +  AL 
Sbjct: 607 ---------------------------AKALRQNTSLKILTLEASEVGDGGAQVLGKALL 639

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+TT+ L  NN+  +GA ++ + L+ N+ +TSL+LA N +G D   A   +L  +  
Sbjct: 640 CNCTLTTLRLNKNNLSKQGAKSLIKALEHNASLTSLELAKNNLG-DIGNAFIRLLGRNHT 698

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           + TL+L    +     + ++ +L  N +  +
Sbjct: 699 LTTLELSLAFVDRPYLKRISQLLERNASFQV 729



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 30/306 (9%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  S+D+       EG   L + L  N + + ++   NGI + G+         N  ++ 
Sbjct: 447 SLESLDLRENQLDREGAVVLGKKLNLNISVKRLNLGWNGIGSEGVAGLAEAFYENACIQE 506

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N I  EG   L   L  N  +  L +S  +L D+  K +A ++  NS L+ LE  
Sbjct: 507 LNLQNNGIEVEGGIPLFRALEANTSLVVLDISHNELGDDDIKILAPVISKNSSLKTLEFC 566

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G  +LA+AL+ NS++  L L  N  G  G  ALAK L  N SL+ L L  + +
Sbjct: 567 SNAITAQGARALAKALVVNSSVTELGLGVNNIGDRGTKALAKALRQNTSLKILTLEASEV 626

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G + L   L                            + NC +L  + L  N++  +
Sbjct: 627 GDGGAQVLGKAL----------------------------LCNC-TLTTLRLNKNNLSKQ 657

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ +  AL+ N ++T+++L  NN+   G +A  R+L  N  +T+L+L+   +     K 
Sbjct: 658 GAKSLIKALEHNASLTSLELAKNNLGDIG-NAFIRLLGRNHTLTTLELSLAFVDRPYLKR 716

Query: 463 LSEVLK 468
           +S++L+
Sbjct: 717 ISQLLE 722


>gi|281201481|gb|EFA75690.1| hypothetical protein PPL_10743 [Polysphondylium pallidum PN500]
          Length = 614

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 217/439 (49%), Gaps = 42/439 (9%)

Query: 185 SLGYNQTAEE-VSFAANGITAAGIKA--------FDGVLQSNIALKTL---NLSGNPIGD 232
           S+  NQ  E  V ++  GI + G K            VL   +AL TL   +L  NP  +
Sbjct: 58  SISTNQPPEPLVKYSERGIVSGGEKVVYRRIVMRIGKVLDYIVALDTLTTIDLRNNPNTN 117

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             V  L D L  N  +  L L +  L  +G  +IA  L  N+ L  L+L  NM+  +G  
Sbjct: 118 SIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANALARNTHLLHLDLGLNMLGANGGN 177

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           S+AEA+ +N+T+  L L  N     GA  + + L+ NKSL+ L LH N + DE    L  
Sbjct: 178 SIAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVNKSLKYLVLHSNQLRDECGLPLAD 237

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L   +G   VL + +N I AK    +A  +K  KSL+ I+   N++GD+G   +AD +K
Sbjct: 238 VLRQNQG-FVVLGLNDNEIGAKSGVALARMLKTVKSLVQIDFGKNELGDDGGLAMADTIK 296

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N++I +I+L  N + +K A AIA  +K N+ IT+LDL++N IGA+G  +L+  L  + +
Sbjct: 297 TNKSIKSINLSWNKLGAKAAKAIADAIKLNTSITTLDLSFNNIGAEGLSSLAASLATNQS 356

Query: 473 INTLKLGWCQIGAS---GAEFVADMLRYNNTISILDLRANGLRDEVCSGC---------- 519
           I+T+ L   ++ AS   G   +A+ L+ N  IS LDL  + L DE               
Sbjct: 357 IHTVDLS--RVSASTPDGHIALANALKTNRIISHLDLNNSKLSDEAGIAIAQSLIENKTI 414

Query: 520 -----NGLSFFHSAIYSLKHMLF--YSLCINYL------QGAKCLAQSFKVVNEALTSID 566
                +   F  SAI  L   L    SL   YL      +G + L ++    N  LT++D
Sbjct: 415 STLVLSNNPFGASAIKELSSALTKNRSLATLYLAASVKIEGVEPLFEALS-QNSTLTTLD 473

Query: 567 LAFNEIRDDGAFAIAQALK 585
           LA N+   +G   IA+ LK
Sbjct: 474 LANNQFGAEGGAMIAKHLK 492



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 183/368 (49%), Gaps = 49/368 (13%)

Query: 253 LSSVDLRDEG-----AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           L+++DLR+          +A+ LK N  +  L L NN +   G TS+A AL  N+ +  L
Sbjct: 105 LTTIDLRNNPNTNSIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANALARNTHLLHL 164

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  GA G N++A+ ++ N +L  L                             D+ 
Sbjct: 165 DLGLNMLGANGGNSIAEAMKKNNTLTHL-----------------------------DLA 195

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N +S +GA  + E +K  KSL ++ L+ N + DE    +AD L+QN+    + L  N I
Sbjct: 196 SNQLSFRGAGPIVEALKVNKSLKYLVLHSNQLRDECGLPLADVLRQNQGFVVLGLNDNEI 255

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +K   A+AR+LK    +  +D   N +G DG  A+++ +K + +I ++ L W ++GA  
Sbjct: 256 GAKSGVALARMLKTVKSLVQIDFGKNELGDDGGLAMADTIKTNKSIKSINLSWNKLGAKA 315

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI---YSLKHMLFYSLCINY 544
           A+ +AD ++ N +I+ LDL  N +      G  GLS   +++    S+  +    +  + 
Sbjct: 316 AKAIADAIKLNTSITTLDLSFNNI------GAEGLSSLAASLATNQSIHTVDLSRVSAST 369

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
             G   LA + K  N  ++ +DL  +++ D+   AIAQ+L  N+   +++L L+NN    
Sbjct: 370 PDGHIALANALK-TNRIISHLDLNNSKLSDEAGIAIAQSLIENK--TISTLVLSNN---P 423

Query: 605 FGQSALTD 612
           FG SA+ +
Sbjct: 424 FGASAIKE 431



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 212/453 (46%), Gaps = 14/453 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++ +S+++       +G   +A +L  N     +    N + A G  +    ++ N  L 
Sbjct: 131 KSITSLNLYNNRLMQKGGTSIANALARNTHLLHLDLGLNMLGANGGNSIAEAMKKNNTLT 190

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L+ N +   G   + + L  N  ++ L L S  LRDE    +A++L+ N    VL L
Sbjct: 191 HLDLASNQLSFRGAGPIVEALKVNKSLKYLVLHSNQLRDECGLPLADVLRQNQGFVVLGL 250

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           N+N I      +LA  L    ++  +    N  G  G  A+A  ++ NKS++ ++L  N 
Sbjct: 251 NDNEIGAKSGVALARMLKTVKSLVQIDFGKNELGDDGGLAMADTIKTNKSIKSINLSWNK 310

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL-YMNDIG 400
           +G +  +A ++        +  LD+  N+I A+G   +A  +   +S+  ++L  ++   
Sbjct: 311 LGAKAAKA-IADAIKLNTSITTLDLSFNNIGAEGLSSLAASLATNQSIHTVDLSRVSAST 369

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            +G   +A+ALK NR I+ +DL  + +  +   AIA+ L +N  I++L L+ NP GA   
Sbjct: 370 PDGHIALANALKTNRIISHLDLNNSKLSDEAGIAIAQSLIENKTISTLVLSNNPFGASAI 429

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
           K LS  L  + ++ TL L    +   G E + + L  N+T++ LDL  N        G  
Sbjct: 430 KELSSALTKNRSLATLYLA-ASVKIEGVEPLFEALSQNSTLTTLDLANNQF------GAE 482

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
           G +     +   KH+L  S+  N L G     Q    + ++L  IDL+ N I      ++
Sbjct: 483 GGAMIAKHLKQCKHLLELSIQNNQL-GVSA-NQILDSIPQSLQCIDLSNNLIMPSSGTSL 540

Query: 581 AQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           A AL+ ++   ++ LN++ N L       L  A
Sbjct: 541 ANALQKDQ---LSKLNISQNKLDDDNSQPLVQA 570



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 123/228 (53%), Gaps = 15/228 (6%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           V +YI    +L  I+L  N   +   +++AD LK N++IT+++L  N +  KG ++IA  
Sbjct: 95  VLDYIVALDTLTTIDLRNNPNTNSIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANA 154

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N+ +  LDL  N +GA+G  +++E +K +  +  L L   Q+   GA  + + L+ N
Sbjct: 155 LARNTHLLHLDLGLNMLGANGGNSIAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVN 214

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ-GAK---CLAQS 554
            ++  L L +N LRDE C    GL     A    ++  F  L +N  + GAK    LA+ 
Sbjct: 215 KSLKYLVLHSNQLRDE-C----GLPL---ADVLRQNQGFVVLGLNDNEIGAKSGVALARM 266

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            K V ++L  ID   NE+ DDG  A+A  +K N+  ++ S+NL+ N L
Sbjct: 267 LKTV-KSLVQIDFGKNELGDDGGLAMADTIKTNK--SIKSINLSWNKL 311



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 13/293 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA-ANGITAAGIKAFDGVLQSNIALK 221
           + +++D+S  N G EGL  LA SL  NQ+   V  +  +  T  G  A    L++N  + 
Sbjct: 328 SITTLDLSFNNIGAEGLSSLAASLATNQSIHTVDLSRVSASTPDGHIALANALKTNRIIS 387

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL---LKNNSILRV 278
            L+L+ + + DE    +   L++N  +  L LS+      GA AI EL   L  N  L  
Sbjct: 388 HLDLNNSKLSDEAGIAIAQSLIENKTISTLVLSNNPF---GASAIKELSSALTKNRSLAT 444

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  + +   G   L EAL +NST+ +L L  N  GA G   +AK L+  K L EL + 
Sbjct: 445 LYLAAS-VKIEGVEPLFEALSQNSTLTTLDLANNQFGAEGGAMIAKHLKQCKHLLELSIQ 503

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G    +     L S    L  +D+ NN I       +A  ++    L  +N+  N 
Sbjct: 504 NNQLGVSANQI----LDSIPQSLQCIDLSNNLIMPSSGTSLANALQK-DQLSKLNISQNK 558

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + D+ ++ +  AL +   +  I +  N    +  + +   ++ N  I   DL 
Sbjct: 559 LDDDNSQPLVQALSKTTALVHIQIIANQFTKQANNQLLDCIRKNKSIYFYDLV 611


>gi|330842768|ref|XP_003293343.1| hypothetical protein DICPUDRAFT_158160 [Dictyostelium purpureum]
 gi|325076341|gb|EGC30135.1| hypothetical protein DICPUDRAFT_158160 [Dictyostelium purpureum]
          Length = 619

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 1/302 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L +  K  +  + ++      GD+G   +A+++ +N+    V    N +    IKA    
Sbjct: 264 LAKMLKTSKVLTKLEFGKNELGDDGGIAMADAIKFNKLICVVRLNWNKLGVKAIKALSDA 323

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+SN ++  L+LS N  GDEG++CL D L  N  +  L LS V     G KA+A+ L+ N
Sbjct: 324 LKSNTSVYQLDLSFNNFGDEGLQCLSDSLKVNKSIRTLDLSRVASGVVGHKALADSLRIN 383

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S ++ L+L N  I   G   LA +L++N +I +L LN N        ALAK LE N +L 
Sbjct: 384 SFIQSLDLTNCRITNEGGIELANSLVDNKSISTLVLNNNTFSKDTVVALAKTLEKNSTLT 443

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  NS+  +G+  L   LS+    L  +D+ NN + ++G   +++YI  C S+  + 
Sbjct: 444 SLSLVNNSLTIDGVEDLFKSLSTSNKTLIKIDLTNNLLGSQGGETISKYIPKC-SISELI 502

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +  +GA  I +A+  N +I T+D+  N+I S     +  VLK+++ I  ++++ N
Sbjct: 503 LTNNQLETQGASSILNAVATNSSIQTLDISNNSIGSDVVEPLCSVLKESNSILKINVSTN 562

Query: 454 PI 455
            +
Sbjct: 563 KL 564



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 246/519 (47%), Gaps = 31/519 (5%)

Query: 98  FVSATFV--LWKLVEKLLMPK--------PSRPSKPTAE----GMNWSVGAGTNLLSGFT 143
           FV+ T V  LW +    ++PK         S+PS+P  E    G+     + T+    FT
Sbjct: 31  FVNYTLVCKLWTIE---VLPKAWSEMTIATSQPSEPLIEYSQDGILARFPSVTSEPYNFT 87

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
             + R  K  ++E+  ++++ +++D+   +  +  +  LA++L  N++   ++   N + 
Sbjct: 88  KLIMRVGK--VSEYIDKIKSLTTIDLKNNSATNYVIDRLADALKTNKSVTYLNLYNNRLM 145

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
             G       L+ N ++  L+L  N +G  G   + D L  N  +  L LS   L   GA
Sbjct: 146 QKGGTVIANALKKNQSITHLDLGLNLLGANGGTAIADALKVNNTLVNLDLSGNQLGLRGA 205

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
             I E LK N  ++ L L++N +       LA+ L +N     L LN N  GA G  ALA
Sbjct: 206 GPIVEALKVNKSIKYLYLSSNQLRDECSLPLADILRQNMGFVELALNDNEIGAKGGIALA 265

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           K L+ +K L +L    N +GD+G  A+   +   K  + V+ +  N +  K    +++ +
Sbjct: 266 KMLKTSKVLTKLEFGKNELGDDGGIAMADAIKFNK-LICVVRLNWNKLGVKAIKALSDAL 324

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+  S+  ++L  N+ GDEG + ++D+LK N++I T+DL        G  A+A  L+ NS
Sbjct: 325 KSNTSVYQLDLSFNNFGDEGLQCLSDSLKVNKSIRTLDLSRVASGVVGHKALADSLRINS 384

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            I SLDL    I  +G   L+  L  + +I+TL L            +A  L  N+T++ 
Sbjct: 385 FIQSLDLTNCRITNEGGIELANSLVDNKSISTLVLNNNTFSKDTVVALAKTLEKNSTLTS 444

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEA 561
           L L  N L      G   L  F S   S K ++   L  N L  QG + +++       +
Sbjct: 445 LSLVNNSL---TIDGVEDL--FKSLSTSNKTLIKIDLTNNLLGSQGGETISKYIPKC--S 497

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           ++ + L  N++   GA +I  A+  N   ++ +L+++NN
Sbjct: 498 ISELILTNNQLETQGASSILNAVATNS--SIQTLDISNN 534



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 173/359 (48%), Gaps = 45/359 (12%)

Query: 253 LSSVDLRDEGAK-----AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           L+++DL++  A       +A+ LK N  +  L L NN +   G T +A AL +N +I  L
Sbjct: 106 LTTIDLKNNSATNYVIDRLADALKTNKSVTYLNLYNNRLMQKGGTVIANALKKNQSITHL 165

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  GA G  A+A  L+ N +L  L L GN +G                        
Sbjct: 166 DLGLNLLGANGGTAIADALKVNNTLVNLDLSGNQLG------------------------ 201

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
                 +GA  + E +K  KS+ ++ L  N + DE +  +AD L+QN     + L  N I
Sbjct: 202 -----LRGAGPIVEALKVNKSIKYLYLSSNQLRDECSLPLADILRQNMGFVELALNDNEI 256

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +KG  A+A++LK + V+T L+   N +G DG  A+++ +KF+  I  ++L W ++G   
Sbjct: 257 GAKGGIALAKMLKTSKVLTKLEFGKNELGDDGGIAMADAIKFNKLICVVRLNWNKLGVKA 316

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHM--LFYSLCINYL 545
            + ++D L+ N ++  LDL  N   DE      GL     ++   K +  L  S   + +
Sbjct: 317 IKALSDALKSNTSVYQLDLSFNNFGDE------GLQCLSDSLKVNKSIRTLDLSRVASGV 370

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            G K LA S + +N  + S+DL    I ++G   +A +L  N+ ++   LN  NN  +K
Sbjct: 371 VGHKALADSLR-INSFIQSLDLTNCRITNEGGIELANSLVDNKSISTLVLN--NNTFSK 426


>gi|320167232|gb|EFW44131.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 573

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 137/254 (53%), Gaps = 1/254 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNLS   +G  G + +      +  + +L LS   + D GA+AI   L+ N  L  L L+
Sbjct: 21  LNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGAALRANRALTELILD 80

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G  ++AEAL  N T++SL L+ N     GA A+A+ L+    L  L L    I
Sbjct: 81  DNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLVALDLRRGQI 140

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G  A+   L  +   LA L +  N I   GA  +AE +K+  SL  + L+ N+IGD 
Sbjct: 141 GDVGALAIAQALL-QNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRLFDNEIGDA 199

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA+ALK N T+  + L  N I   GA AIA  LK NS +T L+L  N IG DGA+A
Sbjct: 200 GASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNEIGEDGAQA 259

Query: 463 LSEVLKFHGNINTL 476
           +S+ L+ +  + +L
Sbjct: 260 ISKALEANMTLTSL 273



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 142/255 (55%), Gaps = 1/255 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++++S +  G  G   ++++  ++ T  ++  + N I  AG +A    L++N AL  L L
Sbjct: 20  ALNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGAALRANRALTELIL 79

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N IG  GV+ + + L  N  ++ L LS   + D GA+AIAE L+    L  L+L    
Sbjct: 80  DDNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLVALDLRRGQ 139

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G  ++A+ALL+N+ +  L L  N  G +GA A+A+ L+ N SLR L L  N IGD 
Sbjct: 140 IGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRLFDNEIGDA 199

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  A+   L      L  L + +N IS  GA  +A+ +K+   L ++NL  N+IG++GA+
Sbjct: 200 GASAIAEALKVNT-TLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNEIGEDGAQ 258

Query: 406 KIADALKQNRTITTI 420
            I+ AL+ N T+T++
Sbjct: 259 AISKALEANMTLTSL 273



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 136/250 (54%), Gaps = 3/250 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           ++++ +KN+S+   L L++  +   G  ++++A   + T+  L L+GN  G  GA A+  
Sbjct: 9   SLSDRIKNSSL--ALNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGA 66

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N++L EL L  N IG  G++A+   L S  G L  L +  N I   GA  +AE ++
Sbjct: 67  ALRANRALTELILDDNQIGVVGVQAIAEALKS-NGTLQSLGLSQNQIDDAGAQAIAEALQ 125

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            C  L+ ++L    IGD GA  IA AL QN  +  + L  N I   GA AIA  LK N+ 
Sbjct: 126 TCPPLVALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTS 185

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N IG  GA A++E LK +  ++ L L   QI   GA+ +AD L+ N+ ++ L
Sbjct: 186 LRCLRLFDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKSNSGLTYL 245

Query: 505 DLRANGLRDE 514
           +L  N + ++
Sbjct: 246 NLERNEIGED 255



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 166/316 (52%), Gaps = 37/316 (11%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           ++NS++ +L+L+    G LGA  +++  + + +L +L L GN IGD G +A+ + L + +
Sbjct: 14  IKNSSL-ALNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGAALRANR 72

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
             L  L + +N I   G   +AE +K+  +L  + L  N I D GA+ IA+AL+    + 
Sbjct: 73  A-LTELILDDNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLV 131

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +DL    I   GA AIA+ L  N+ +  L LA N IG  GA+A++E LK + ++  L+L
Sbjct: 132 ALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRL 191

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
              +IG +GA  +A+ L+ N T+  L L +N + D                         
Sbjct: 192 FDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDV------------------------ 227

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                   GA+ +A + K  N  LT ++L  NEI +DGA AI++AL+AN  + +TSL  +
Sbjct: 228 --------GAQAIADALKS-NSGLTYLNLERNEIGEDGAQAISKALEAN--MTLTSLYTS 276

Query: 599 NNFLTKFGQSALTDAK 614
            +   + GQ+  T ++
Sbjct: 277 MSDRRQAGQALATQSR 292



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 131/254 (51%), Gaps = 1/254 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L LSS  L   GA+ +++  K +  L  L L+ N I  +G  ++  AL  N  +  L L+
Sbjct: 21  LNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGAALRANRALTELILD 80

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G +G  A+A+ L+ N +L+ L L  N I D G +A+   L +    L  LD+    
Sbjct: 81  DNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCP-PLVALDLRRGQ 139

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  +A+ +     L  + L  N IG  GA+ IA+ALK N ++  + L  N I   
Sbjct: 140 IGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRLFDNEIGDA 199

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GASAIA  LK N+ + +L L  N I   GA+A+++ LK +  +  L L   +IG  GA+ 
Sbjct: 200 GASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNEIGEDGAQA 259

Query: 491 VADMLRYNNTISIL 504
           ++  L  N T++ L
Sbjct: 260 ISKALEANMTLTSL 273



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 106/195 (54%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           RA + + +     G  G+  +AE+L  N T + +  + N I  AG +A    LQ+   L 
Sbjct: 72  RALTELILDDNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLV 131

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L    IGD G   +   L+ N  +  L L+   +   GA+AIAE LK+N+ LR L L
Sbjct: 132 ALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRL 191

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G +++AEAL  N+T+ +LHLN N    +GA A+A  L+ N  L  L+L  N 
Sbjct: 192 FDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNE 251

Query: 342 IGDEGIRALMSGLSS 356
           IG++G +A+   L +
Sbjct: 252 IGEDGAQAISKALEA 266



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K   +   + +     GD G   +AE+L  N T + +   +N I+  G +A  
Sbjct: 174 QAIAEALKSNTSLRCLRLFDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIA 233

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
             L+SN  L  LNL  N IG++G + +   L  N  +  L  S  D R  G
Sbjct: 234 DALKSNSGLTYLNLERNEIGEDGAQAISKALEANMTLTSLYTSMSDRRQAG 284


>gi|320170306|gb|EFW47205.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 501

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 164/311 (52%), Gaps = 17/311 (5%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+AIAE LK N+ L  LEL  + I   G  + AEAL  N+T+ +L +            
Sbjct: 31  GAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNTTLTTLSIR----------- 79

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
             + LE  + L+  +L  N IG  G +A+   L   K  L +L +  N I + GA  +AE
Sbjct: 80  -LETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNK-TLTLLILRENQIGSAGAQAIAE 137

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K   +L  + L  N IGD G + IA+ALK N+T+T ++L GN I   GA AIA  LK 
Sbjct: 138 ALKVNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKR 197

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  + +L L  N IG  GA+ +++ L+ +  + TL L   Q+G +GA+ +A++L+ N T+
Sbjct: 198 NMTVQTLSLERNQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKVNATL 257

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           ++L L  N L D   +G    +       +++ +     CI  L GA+ + ++ +V +E 
Sbjct: 258 AVLYLHENQLGD---AGAKAFAEALRVNMTVQRLDLTGNCIGNL-GAQAIDEARQVNDEC 313

Query: 562 LTSIDLAFNEI 572
             +ID   N +
Sbjct: 314 RVNIDRQINPL 324



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 18/330 (5%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +  AG +A    L+ N  L +L L  + IG++G K   + L  N       L+++ +R  
Sbjct: 27  VGVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNT-----TLTTLSIR-- 79

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
                 E L+   +L+   L  N I   G  ++AEAL  N T+  L L  N  G+ GA A
Sbjct: 80  -----LETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQA 134

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+ L+ N +L+EL L  N IGD G +A+   L   K  L  L++  N I   GA  +AE
Sbjct: 135 IAEALKVNTTLKELRLDKNQIGDAGTKAIAEALKMNK-TLTKLNLIGNQIGVAGAEAIAE 193

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K   ++  ++L  N IGD GA  IA AL+ N  +TT+ L  N +   GA  +A VLK 
Sbjct: 194 ALKRNMTVQTLSLERNQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKV 253

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +  L L  N +G  GAKA +E L+ +  +  L L    IG  GA+ + +  + N+  
Sbjct: 254 NATLAVLYLHENQLGDAGAKAFAEALRVNMTVQRLDLTGNCIGNLGAQAIDEARQVNDEC 313

Query: 502 SI-LDLRAN----GLRDEVCSGCNGLSFFH 526
            + +D + N     LR  + +  +  + FH
Sbjct: 314 RVNIDRQINPLTLSLRPRLATAEDIQAVFH 343



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 160/323 (49%), Gaps = 21/323 (6%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           ++ L + AK   A+  + + GR  G  G   +AE L  N T   +    + I   G KAF
Sbjct: 5   QRMLYDQAKSANAYYDLLLPGR-VGVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAF 63

Query: 211 DGVLQSNIALKTL----------------NLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
              L+ N  L TL                NL  N IG  G + + + L  N  +  L L 
Sbjct: 64  AEALKVNTTLTTLSIRLETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILR 123

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +   GA+AIAE LK N+ L+ L L+ N I  +G  ++AEAL  N T+  L+L GN  
Sbjct: 124 ENQIGSAGAQAIAEALKVNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQI 183

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A+ L+ N +++ L L  N IGD G R +   L +    +  L +  N +   
Sbjct: 184 GVAGAEAIAEALKRNMTVQTLSLERNQIGDVGARVIAKALEANMA-VTTLSLCENQLGDA 242

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   +L  + L+ N +GD GA+  A+AL+ N T+  +DL GN I + GA A
Sbjct: 243 GAQVLAEVLKVNATLAVLYLHENQLGDAGAKAFAEALRVNMTVQRLDLTGNCIGNLGAQA 302

Query: 435 I--ARVLKDNSVITSLDLAYNPI 455
           I  AR + D   + ++D   NP+
Sbjct: 303 IDEARQVNDECRV-NIDRQINPL 324



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 152/304 (50%), Gaps = 24/304 (7%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A+GL+ N +L  L L  + IG++G +A    L      L  L I   ++  K
Sbjct: 28  GVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNT-TLTTLSIRLETLERK 86

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
                       + L   NL  N IG  GA+ IA+ALK N+T+T + L  N I S GA A
Sbjct: 87  ------------RLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQA 134

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +  L L  N IG  G KA++E LK +  +  L L   QIG +GAE +A+ 
Sbjct: 135 IAEALKVNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEA 194

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLA 552
           L+ N T+  L L  N + D       G      A+ +   +   SLC N L   GA+ LA
Sbjct: 195 LKRNMTVQTLSLERNQIGDV------GARVIAKALEANMAVTTLSLCENQLGDAGAQVLA 248

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           +  K VN  L  + L  N++ D GA A A+AL+ N  + V  L+L  N +   G  A+ +
Sbjct: 249 EVLK-VNATLAVLYLHENQLGDAGAKAFAEALRVN--MTVQRLDLTGNCIGNLGAQAIDE 305

Query: 613 AKDL 616
           A+ +
Sbjct: 306 ARQV 309



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 135/263 (51%), Gaps = 31/263 (11%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI---------- 420
           +   GA  +AE +K   +L  + L  +DIG++GA+  A+ALK N T+TT+          
Sbjct: 27  VGVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNTTLTTLSIRLETLERK 86

Query: 421 ------DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
                 +L  N I   GA AIA  LK N  +T L L  N IG+ GA+A++E LK +  + 
Sbjct: 87  RLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEALKVNTTLK 146

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
            L+L   QIG +G + +A+ L+ N T++ L+L  N +      G  G      A+   ++
Sbjct: 147 ELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQI------GVAGAEAIAEALK--RN 198

Query: 535 MLFYSLCINYLQ----GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
           M   +L +   Q    GA+ +A++ +  N A+T++ L  N++ D GA  +A+ LK N  +
Sbjct: 199 MTVQTLSLERNQIGDVGARVIAKALE-ANMAVTTLSLCENQLGDAGAQVLAEVLKVNATL 257

Query: 591 AVTSLNLANNFLTKFGQSALTDA 613
           AV  L L  N L   G  A  +A
Sbjct: 258 AV--LYLHENQLGDAGAKAFAEA 278



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 6/235 (2%)

Query: 105 LWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESK------QTLNEFA 158
           L  L  K L+   + P     +G   ++     +    T  + RE++      Q + E  
Sbjct: 80  LETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEAL 139

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K       + +     GD G   +AE+L  N+T  +++   N I  AG +A    L+ N+
Sbjct: 140 KVNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNM 199

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            ++TL+L  N IGD G + +   L  N  V  L L    L D GA+ +AE+LK N+ L V
Sbjct: 200 TVQTLSLERNQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKVNATLAV 259

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           L L+ N +  +G  + AEAL  N T++ L L GN  G LGA A+ +  + N   R
Sbjct: 260 LYLHENQLGDAGAKAFAEALRVNMTVQRLDLTGNCIGNLGAQAIDEARQVNDECR 314



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 27/150 (18%)

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           ++G +GA+ +A+ L+ N T++ L+L  + +      G +G   F  A+     +   S+ 
Sbjct: 26  RVGVAGAQAIAEGLKVNTTLTSLELMEHDI------GNDGAKAFAEALKVNTTLTTLSIR 79

Query: 542 INYLQ------------------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
           +  L+                  GA+ +A++ K VN+ LT + L  N+I   GA AIA+A
Sbjct: 80  LETLERKRLLKHSNLPQNQIGQGGAQAIAEALK-VNKTLTLLILRENQIGSAGAQAIAEA 138

Query: 584 LKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           LK N    +  L L  N +   G  A+ +A
Sbjct: 139 LKVN--TTLKELRLDKNQIGDAGTKAIAEA 166


>gi|328866540|gb|EGG14924.1| hypothetical protein DFA_10798 [Dictyostelium fasciculatum]
          Length = 760

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 211/434 (48%), Gaps = 17/434 (3%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
             D     LAESL  N T   ++ + N I   G  +    L+ N ++  LN S N +G++
Sbjct: 310 ISDSAAKILAESLETNDTLLSLNLSVNEIRQDGSVSLANALKVNKSITLLNYSYNLLGEQ 369

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G     ++L+ N  +  L LS+  +       I   L  N+ L+ L L  NMID  G   
Sbjct: 370 GTMAFSEMLIYNKSLTHLNLSANKITFSNTPTITLALSKNTTLKSLNLLRNMIDPIGCQY 429

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK--SLRELHLHGNSIGDEGIRALM 351
           +A  L  N ++ S++ + N  G  G+ +++K L  NK  +++EL L  N I D+G  A  
Sbjct: 430 IANGLANNQSLTSINFSSNKLGNQGSTSISKALAINKGSAIKELDLSSNCIEDQGAAAFA 489

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKS-LLWINLYMNDIGDEGAEKIAD 409
           + +   +  +  LD+  N I + G   +A+ +++N KS +  INL  N I   GA+ +A+
Sbjct: 490 NVIIYNQS-VTTLDLSVNWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLGAKHLAE 548

Query: 410 ALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           AL   + ++  I+L  N I ++GA  +++ L  N+ ITS++L+ N IG +G K LS  L 
Sbjct: 549 ALMHPDSSLHHINLFSNYIETEGAFELSKALATNTSITSIELSANLIGNEGVKYLSRALL 608

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
            + +I ++ L    +   G + + +++  N TI  LDL  N +      G  G      A
Sbjct: 609 TNVSIKSISLSQSLLSYEGIQHIVELMSVNTTIRYLDLSYNII------GSRGAQELSRA 662

Query: 529 IYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           +   K +    L  N L  +GA  +A  F  +N  L  + L  N+I  DGA  I + L  
Sbjct: 663 LLQNKTITSLDLSSNSLGDEGATAIADIFP-INTTLQRLSLYNNKIGTDGAKHIVRNLSK 721

Query: 587 NEDVAVTSLNLANN 600
           N    + S+NL  N
Sbjct: 722 NH--TLFSINLLAN 733



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 217/457 (47%), Gaps = 50/457 (10%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDE--GVKCLCDILVDNAGVERL 251
           ++   N +   GI     ++++N + +K+LNL+ + IG E   +    D+L  N  +  L
Sbjct: 244 INLTVNLMYTNGIDVICEIMKTNQSVIKSLNLNKSKIGRETNSLMVFSDVLKLNHSLTSL 303

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            LSS  + D  AK +AE L+ N  L  L L+ N I   G  SLA AL  N +I  L+ + 
Sbjct: 304 DLSSSQISDSAAKILAESLETNDTLLSLNLSVNEIRQDGSVSLANALKVNKSITLLNYSY 363

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G  G  A ++ L  NKSL  L+L  N I       +   L S+   L  L++  N I
Sbjct: 364 NLLGEQGTMAFSEMLIYNKSLTHLNLSANKITFSNTPTITLAL-SKNTTLKSLNLLRNMI 422

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR--TITTIDLGGNNIHS 429
              G  ++A  + N +SL  IN   N +G++G+  I+ AL  N+   I  +DL  N I  
Sbjct: 423 DPIGCQYIANGLANNQSLTSINFSSNKLGNQGSTSISKALAINKGSAIKELDLSSNCIED 482

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL--KFHGNINTLKLGWCQIGASG 487
           +GA+A A V+  N  +T+LDL+ N I ++G   L++         I ++ L    I   G
Sbjct: 483 QGAAAFANVIIYNQSVTTLDLSVNWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLG 542

Query: 488 AEFVADMLRY-----------------------------NNTISILDLRANGLRDEVCSG 518
           A+ +A+ L +                             N +I+ ++L AN + +E    
Sbjct: 543 AKHLAEALMHPDSSLHHINLFSNYIETEGAFELSKALATNTSITSIELSANLIGNE---- 598

Query: 519 CNGLSFFHSAI---YSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
             G+ +   A+    S+K +      ++Y +G + + +    VN  +  +DL++N I   
Sbjct: 599 --GVKYLSRALLTNVSIKSISLSQSLLSY-EGIQHIVE-LMSVNTTIRYLDLSYNIIGSR 654

Query: 576 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           GA  +++AL  N+   +TSL+L++N L   G +A+ D
Sbjct: 655 GAQELSRALLQNK--TITSLDLSSNSLGDEGATAIAD 689



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 158/307 (51%), Gaps = 6/307 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQ--TAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           ++ +S++ S    G++G   ++++L  N+    +E+  ++N I   G  AF  V+  N +
Sbjct: 438 QSLTSINFSSNKLGNQGSTSISKALAINKGSAIKELDLSSNCIEDQGAAAFANVIIYNQS 497

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAE-LLKNNSIL 276
           + TL+LS N I   GV  L    ++N  + +  + LS   +   GAK +AE L+  +S L
Sbjct: 498 VTTLDLSVNWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLGAKHLAEALMHPDSSL 557

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             + L +N I+  G   L++AL  N++I S+ L+ N  G  G   L++ L  N S++ + 
Sbjct: 558 HHINLFSNYIETEGAFELSKALATNTSITSIELSANLIGNEGVKYLSRALLTNVSIKSIS 617

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  + +  EGI+ ++  L S    +  LD+  N I ++GA  ++  +   K++  ++L  
Sbjct: 618 LSQSLLSYEGIQHIVE-LMSVNTTIRYLDLSYNIIGSRGAQELSRALLQNKTITSLDLSS 676

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N +GDEGA  IAD    N T+  + L  N I + GA  I R L  N  + S++L  N I 
Sbjct: 677 NSLGDEGATAIADIFPINTTLQRLSLYNNKIGTDGAKHIVRNLSKNHTLFSINLLANRID 736

Query: 457 ADGAKAL 463
               K +
Sbjct: 737 TQCLKPI 743



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 4/261 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE--EVSFAANGITAAGIKAF-DGVLQSNI 218
           ++ +++D+S       G+  LA++   N  +    ++ + N I   G K   + ++  + 
Sbjct: 496 QSVTTLDLSVNWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLGAKHLAEALMHPDS 555

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  +NL  N I  EG   L   L  N  +  ++LS+  + +EG K ++  L  N  ++ 
Sbjct: 556 SLHHINLFSNYIETEGAFELSKALATNTSITSIELSANLIGNEGVKYLSRALLTNVSIKS 615

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + L+ +++ Y G   + E +  N+TIR L L+ N  G+ GA  L++ L  NK++  L L 
Sbjct: 616 ISLSQSLLSYEGIQHIVELMSVNTTIRYLDLSYNIIGSRGAQELSRALLQNKTITSLDLS 675

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NS+GDEG  A+ + +      L  L + NN I   GA H+   +    +L  INL  N 
Sbjct: 676 SNSLGDEGATAI-ADIFPINTTLQRLSLYNNKIGTDGAKHIVRNLSKNHTLFSINLLANR 734

Query: 399 IGDEGAEKIADALKQNRTITT 419
           I  +  + I   L+  +   T
Sbjct: 735 IDTQCLKPILKRLEHTQHTQT 755


>gi|156353043|ref|XP_001622887.1| predicted protein [Nematostella vectensis]
 gi|156209518|gb|EDO30787.1| predicted protein [Nematostella vectensis]
          Length = 408

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 190/368 (51%), Gaps = 8/368 (2%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + + E  K     +S+ + G   GD G   +A  L  N T  ++S A + I  AGIK
Sbjct: 4   EAGRAIGEMLKHNTTVTSLFLLGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIK 63

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIA 267
           A   V+Q+   +  LNLS NP+G +GVK +  +LV +   ++ L L   ++   GAK +A
Sbjct: 64  AITKVIQN---VTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDVFGAKELA 120

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L  NS L  L +  N I+  G  +LAE++  N T++ L+++ N  G  G   +    E
Sbjct: 121 IALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYISYNNVGQNGKKVIISACE 180

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            +KS+R L+   +SI +   +     L +    +  L I +++++++ +  + E ++   
Sbjct: 181 TSKSVRHLYHENDSILNTFTKPHSVCLVTLNKTVRTLGIRSHNMTSEASRAIGEMLRRNT 240

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           ++  + L    +GD GA  IA  L QN+TI  + L  ++I + G  AI  V+++   +T 
Sbjct: 241 TVTSLFLLGGRLGDSGARGIAIGLAQNKTIADLSLVRSSIGTAGIKAITNVIQN---VTR 297

Query: 448 LDLAYNPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           L+L+ NP+G DG KA++ +L K    +  L L  C I   GA+ +A  L  ++ +  L +
Sbjct: 298 LNLSSNPVGYDGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSRDSCLEELSV 357

Query: 507 RANGLRDE 514
             N + DE
Sbjct: 358 ACNDINDE 365



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + + E  +     +S+ + G   GD G   +A  L  N+T  ++S   + I  AGIK
Sbjct: 227 EASRAIGEMLRRNTTVTSLFLLGGRLGDSGARGIAIGLAQNKTIADLSLVRSSIGTAGIK 286

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIA 267
           A   V+Q+   +  LNLS NP+G +GVK +  +LV +   ++ L L   ++   GAK +A
Sbjct: 287 AITNVIQN---VTRLNLSSNPVGYDGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELA 343

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L  +S L  L +  N I+  G  +LAE++  N T++ L+++ N  G  G   +    E
Sbjct: 344 IALSRDSCLEELSVACNDINDEGMCALAESVASNETLQVLYISYNNVGQNGKKVIISACE 403

Query: 328 GNKSL 332
            +KS+
Sbjct: 404 TSKSV 408



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 169/392 (43%), Gaps = 67/392 (17%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           +  E  +AI E+LK+N+ +  L L    +  SG   +A  L +N+TI  L +  +  G  
Sbjct: 1   MTSEAGRAIGEMLKHNTTVTSLFLLGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTA 60

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G  A+ K ++   ++  L+L  N +G +G++A+   L     +L  L + + +I   GA 
Sbjct: 61  GIKAITKVIQ---NVTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDVFGAK 117

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +     L  +++  NDI DEG   +A+++  N T+  + +  NN+   G   I  
Sbjct: 118 ELAIALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYISYNNVGQNGKKVIIS 177

Query: 438 VLKD-----------------------------NSVITSLDLAYNPIGADGAKALSEVLK 468
             +                              N  + +L +  + + ++ ++A+ E+L+
Sbjct: 178 ACETSKSVRHLYHENDSILNTFTKPHSVCLVTLNKTVRTLGIRSHNMTSEASRAIGEMLR 237

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
            +  + +L L   ++G SGA  +A  L  N TI+ L L    +R  +  G  G+    + 
Sbjct: 238 RNTTVTSLFLLGGRLGDSGARGIAIGLAQNKTIADLSL----VRSSI--GTAGIKAITNV 291

Query: 529 IYSLKHM----------------------------LFYSLCINYLQGAKCLAQSFKVVNE 560
           I ++  +                            LF   C   + GAK LA +    + 
Sbjct: 292 IQNVTRLNLSSNPVGYDGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALS-RDS 350

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
            L  + +A N+I D+G  A+A+++ +NE + V
Sbjct: 351 CLEELSVACNDINDEGMCALAESVASNETLQV 382



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 10/267 (3%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           +  DEG+  LAES+  N+T + +  + N +   G K      +++ +++ L    + I +
Sbjct: 138 DINDEGMCALAESVASNETLQVLYISYNNVGQNGKKVIISACETSKSVRHLYHENDSILN 197

Query: 233 EGVK----CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
              K    CL  +   N  V  L + S ++  E ++AI E+L+ N+ +  L L    +  
Sbjct: 198 TFTKPHSVCLVTL---NKTVRTLGIRSHNMTSEASRAIGEMLRRNTTVTSLFLLGGRLGD 254

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG   +A  L +N TI  L L  +  G  G  A+   ++   ++  L+L  N +G +G++
Sbjct: 255 SGARGIAIGLAQNKTIADLSLVRSSIGTAGIKAITNVIQ---NVTRLNLSSNPVGYDGVK 311

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L     +L  L + + +I   GA  +A  +     L  +++  NDI DEG   +A
Sbjct: 312 AIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSRDSCLEELSVACNDINDEGMCALA 371

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAI 435
           +++  N T+  + +  NN+   G   I
Sbjct: 372 ESVASNETLQVLYISYNNVGQNGKKVI 398


>gi|320164466|gb|EFW41365.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 675

 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/277 (36%), Positives = 142/277 (51%), Gaps = 37/277 (13%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL+L+ N IGD G   +   L   K  L  L +  N I    A  +AE +K   +L+ +N
Sbjct: 24  ELNLYQNQIGDPGAYTIAEALKVNK-TLTALSLSGNQIGDAAARTIAEALKVNTTLIKLN 82

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LY N IG+ GA  IA+ALK N+T+TT+ L GN I + GA  +A VLK N+ +T L+L  N
Sbjct: 83  LYQNQIGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVNT-LTELNLRQN 141

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA A++E LK +  +  L L   QIG  GA  +A+  + N T++ L L  N + D
Sbjct: 142 QIGNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGD 201

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA+ +A++ KV N+ L  + L  N+I 
Sbjct: 202 A--------------------------------GAQAIAEALKV-NKTLKELFLWRNQIG 228

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           D GA AIA+ALK N+ +    LN   NFLT  G +AL
Sbjct: 229 DAGAQAIAEALKVNKTLKTLFLN--ENFLTNTGINAL 263



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 132/244 (54%), Gaps = 2/244 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGD G   + + L  N  +  L LS   + D  A+ IAE LK N+ L  L L 
Sbjct: 25  LNLYQNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLY 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G T++AEAL  N T+ +L L+GN  G +GA  +A+ L+ N +L EL+L  N I
Sbjct: 85  QNQIGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVN-TLTELNLRQNQI 143

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G+ G  A+   L     +L  LD+  N I   GA  +AE  K   +L  ++L+ N IGD 
Sbjct: 144 GNAGATAIAEALKVNT-RLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDA 202

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N+T+  + L  N I   GA AIA  LK N  + +L L  N +   G  A
Sbjct: 203 GAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNENFLTNTGINA 262

Query: 463 LSEV 466
           L + 
Sbjct: 263 LRQT 266



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 134/244 (54%), Gaps = 5/244 (2%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N I   G  ++AEAL  N T+ +L L+GN  G   A  +A+ L+ N +L +L+L+
Sbjct: 25  LNLYQNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLY 84

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IG+ G  A+   L   K  L  L +  N I   GA  +AE +K   +L  +NL  N 
Sbjct: 85  QNQIGNAGATAIAEALKVNK-TLTTLSLSGNQIGNVGAQVMAEVLK-VNTLTELNLRQNQ 142

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG+ GA  IA+ALK N  +T +DL  N I   GA AIA   K N+ +T+L L  N IG  
Sbjct: 143 IGNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDA 202

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A++E LK +  +  L L   QIG +GA+ +A+ L+ N T+  L L  N L +   +G
Sbjct: 203 GAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNENFLTN---TG 259

Query: 519 CNGL 522
            N L
Sbjct: 260 INAL 263



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 124/224 (55%), Gaps = 12/224 (5%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NLY N IGD GA  IA+ALK N+T+T + L GN I    A  IA  LK N+ +  L+L 
Sbjct: 25  LNLYQNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLY 84

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA A++E LK +  + TL L   QIG  GA+ +A++L+  NT++ L+LR N +
Sbjct: 85  QNQIGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKV-NTLTELNLRQNQI 143

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAF 569
                 G  G +    A+     +    L  N +   GA  +A++FK VN  LT++ L  
Sbjct: 144 ------GNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFK-VNTTLTTLSLHQ 196

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N+I D GA AIA+ALK N+   +  L L  N +   G  A+ +A
Sbjct: 197 NQIGDAGAQAIAEALKVNK--TLKELFLWRNQIGDAGAQAIAEA 238



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 127/251 (50%), Gaps = 5/251 (1%)

Query: 188 YNQTAE---EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           Y+Q  +   E++   N I   G       L+ N  L  L+LSGN IGD   + + + L  
Sbjct: 15  YDQVKDASGELNLYQNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKV 74

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  + +L L    + + GA AIAE LK N  L  L L+ N I   G   +AE L  N T+
Sbjct: 75  NTTLIKLNLYQNQIGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVN-TL 133

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             L+L  N  G  GA A+A+ L+ N  L  L L  N IGD+G  A+          L  L
Sbjct: 134 TELNLRQNQIGNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFKVNT-TLTTL 192

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  N I   GA  +AE +K  K+L  + L+ N IGD GA+ IA+ALK N+T+ T+ L  
Sbjct: 193 SLHQNQIGDAGAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNE 252

Query: 425 NNIHSKGASAI 435
           N + + G +A+
Sbjct: 253 NFLTNTGINAL 263



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 1/206 (0%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           T+ E  K  +  +++ +SG   GD     +AE+L  N T  +++   N I  AG  A   
Sbjct: 39  TIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLYQNQIGNAGATAIAE 98

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L+ N  L TL+LSGN IG+ G + + ++L  N   E L L    + + GA AIAE LK 
Sbjct: 99  ALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVNTLTE-LNLRQNQIGNAGATAIAEALKV 157

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L+L  N I   G  ++AEA   N+T+ +L L+ N  G  GA A+A+ L+ NK+L
Sbjct: 158 NTRLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDAGAQAIAEALKVNKTL 217

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRK 358
           +EL L  N IGD G +A+   L   K
Sbjct: 218 KELFLWRNQIGDAGAQAIAEALKVNK 243



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 1/177 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G+ G   +AE+L  N+T   +S + N I   G +    VL+ N  L  LNL  N IG+ 
Sbjct: 88  IGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVN-TLTELNLRQNQIGNA 146

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   + + L  N  +  L L    + D+GA AIAE  K N+ L  L L+ N I  +G  +
Sbjct: 147 GATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDAGAQA 206

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           +AEAL  N T++ L L  N  G  GA A+A+ L+ NK+L+ L L+ N + + GI AL
Sbjct: 207 IAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNENFLTNTGINAL 263



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 1/145 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K +   + +++     G+ G   +AE+L  N     +    N I   G  A  
Sbjct: 122 QVMAEVLK-VNTLTELNLRQNQIGNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIA 180

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              + N  L TL+L  N IGD G + + + L  N  ++ L L    + D GA+AIAE LK
Sbjct: 181 EAFKVNTTLTTLSLHQNQIGDAGAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALK 240

Query: 272 NNSILRVLELNNNMIDYSGFTSLAE 296
            N  L+ L LN N +  +G  +L +
Sbjct: 241 VNKTLKTLFLNENFLTNTGINALRQ 265


>gi|320170816|gb|EFW47715.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 518

 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 173/339 (51%), Gaps = 40/339 (11%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L+   I  +   ++AE L  N+T+ +L L  N  G  GA A+A     N  L++L L+
Sbjct: 26  LYLDRKQIGDAEAQAIAEGLKVNTTVHTLGLYDNQIGDAGAIAIAGAFAANPKLQKLSLY 85

Query: 339 GNSIGDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            N IGD G RA+   +   KG  +  L++  N I   GA  +AE +     L+ + L+ N
Sbjct: 86  DNRIGDAGARAIAEAI---KGSCVWELNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKN 142

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IGD GA  IA+ALK+N T+ ++ LG N I   GA AI   LK NS +T L+L  N IG 
Sbjct: 143 RIGDVGATAIAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGH 202

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            GA+A+ E LK +  ++ L L   +IG +GA+ +A+ L+ N++I  LDL +  + D    
Sbjct: 203 AGAQAIGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGD---- 258

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
                                         A  LA + ++V+  L  +DL +N I D GA
Sbjct: 259 ------------------------------AGALALAERMVHSELAELDLGYNRIGDVGA 288

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            AIA+A+K  +   +T L L++N +       +T+A+++
Sbjct: 289 QAIAKAIK--DGATLTGLYLSHNCIGDAAVDLITEAQEI 325



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 151/322 (46%), Gaps = 31/322 (9%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           +  GD     +AE L  N T   +    N I  AG  A  G   +N  L+ L+L  N IG
Sbjct: 31  KQIGDAEAQAIAEGLKVNTTVHTLGLYDNQIGDAGAIAIAGAFAANPKLQKLSLYDNRIG 90

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           D G + + +  +  + V  L L    + D GA+AIAE L  NS L  L L  N I   G 
Sbjct: 91  DAGARAIAEA-IKGSCVWELNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKNRIGDVGA 149

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           T++AEAL EN+T+ SL L  N  G  GA A+ + L+ N  L  L+L  N IG  G +A+ 
Sbjct: 150 TAIAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHAGAQAIG 209

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L                            +  C S L   LY N IGD GA+ IA+AL
Sbjct: 210 EALK---------------------------VNTCLSKL--TLYGNRIGDAGAQAIAEAL 240

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           K N +I  +DL    I   GA A+A  +  +S +  LDL YN IG  GA+A+++ +K   
Sbjct: 241 KVNSSIQELDLSSTQIGDAGALALAERMV-HSELAELDLGYNRIGDVGAQAIAKAIKDGA 299

Query: 472 NINTLKLGWCQIGASGAEFVAD 493
            +  L L    IG +  + + +
Sbjct: 300 TLTGLYLSHNCIGDAAVDLITE 321



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/291 (36%), Positives = 146/291 (50%), Gaps = 3/291 (1%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L    IGD   + + + L  N  V  L L    + D GA AIA     N  L+ L L 
Sbjct: 26  LYLDRKQIGDAEAQAIAEGLKVNTTVHTLGLYDNQIGDAGAIAIAGAFAANPKLQKLSLY 85

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I  +G  ++AEA ++ S +  L+L  N  G  GA A+A+ L+ N  L  L L  N I
Sbjct: 86  DNRIGDAGARAIAEA-IKGSCVWELNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKNRI 144

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G  A+   L      L  L +G N I   GA  + E +K    L  +NL  N IG  
Sbjct: 145 GDVGATAIAEALKENT-TLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHA 203

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ I +ALK N  ++ + L GN I   GA AIA  LK NS I  LDL+   IG  GA A
Sbjct: 204 GAQAIGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAGALA 263

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           L+E +  H  +  L LG+ +IG  GA+ +A  ++   T++ L L  N + D
Sbjct: 264 LAERM-VHSELAELDLGYNRIGDVGAQAIAKAIKDGATLTGLYLSHNCIGD 313



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 121/237 (51%), Gaps = 3/237 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE++       E++   N I  AG +A    L  N  L TL L  N IGD 
Sbjct: 89  IGDAGARAIAEAIK-GSCVWELNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKNRIGDV 147

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   + + L +N  +  L+L    + D GA+AI E LK NS L  L L  N I ++G  +
Sbjct: 148 GATAIAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHAGAQA 207

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           + EAL  N+ +  L L GN  G  GA A+A+ L+ N S++EL L    IGD G  AL   
Sbjct: 208 IGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAGALALAER 267

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           +     +LA LD+G N I   GA  +A+ IK+  +L  + L  N IGD   + I +A
Sbjct: 268 MV--HSELAELDLGYNRIGDVGAQAIAKAIKDGATLTGLYLSHNCIGDAAVDLITEA 322



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 1/196 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E   E     ++ +     GD G   +AE+L  N T   +    N I  AG +A  
Sbjct: 122 QAIAETLDENSRLMTLTLWKNRIGDVGATAIAEALKENTTLCSLKLGENQIGDAGAQAIG 181

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL  N IG  G + + + L  N  + +L L    + D GA+AIAE LK
Sbjct: 182 EALKVNSDLTRLNLQQNQIGHAGAQAIGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALK 241

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS ++ L+L++  I  +G  +LAE ++ +S +  L L  N  G +GA A+AK ++   +
Sbjct: 242 VNSSIQELDLSSTQIGDAGALALAERMV-HSELAELDLGYNRIGDVGAQAIAKAIKDGAT 300

Query: 332 LRELHLHGNSIGDEGI 347
           L  L+L  N IGD  +
Sbjct: 301 LTGLYLSHNCIGDAAV 316


>gi|320167613|gb|EFW44512.1| hypothetical protein CAOG_02537 [Capsaspora owczarzaki ATCC 30864]
          Length = 302

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/247 (38%), Positives = 142/247 (57%), Gaps = 2/247 (0%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D  A+AIA+  K N  + VL L+NN I  +G  +LAEAL  N T+  L+L+ N+ G  GA
Sbjct: 34  DAEAQAIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGDAGA 93

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ NK L  L+L  N IGD G +A+ + L      L +L +G N I + GA  +
Sbjct: 94  LAIAEALKVNKRLTSLNLVENQIGDAGGQAIANALKVNT-TLEMLYLGRNPIGSTGAQAI 152

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+ +K   +L  +  + N IGD GA+ IADAL+ N T+TT+ L  N   + GA+AIA  L
Sbjct: 153 ADSLKVNNTLTELYFFRNQIGDAGAQAIADALEVNSTLTTLILEKNQFGNAGATAIAEAL 212

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK-LGWCQIGASGAEFVADMLRYN 498
           + N+ +T L+L+ N I   GA+ ++E    +  + TLK +  C I  + + F  ++  Y 
Sbjct: 213 RVNTTLTELNLSQNAIADAGAQMIAEAFNINKTLTTLKYVDSCCIVPNVSAFSPELENYV 272

Query: 499 NTISILD 505
             IS L+
Sbjct: 273 TEISSLE 279



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 115/221 (52%), Gaps = 29/221 (13%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++A+A   N T+  L L+ N  G+ GA ALA+ L+ NK+L  L+L  N IGD        
Sbjct: 39  AIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGD-------- 90

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                                 GA  +AE +K  K L  +NL  N IGD G + IA+ALK
Sbjct: 91  ---------------------AGALAIAEALKVNKRLTSLNLVENQIGDAGGQAIANALK 129

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+  + LG N I S GA AIA  LK N+ +T L    N IG  GA+A+++ L+ +  
Sbjct: 130 VNTTLEMLYLGRNPIGSTGAQAIADSLKVNNTLTELYFFRNQIGDAGAQAIADALEVNST 189

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           + TL L   Q G +GA  +A+ LR N T++ L+L  N + D
Sbjct: 190 LTTLILEKNQFGNAGATAIAEALRVNTTLTELNLSQNAIAD 230



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 126/276 (45%), Gaps = 34/276 (12%)

Query: 150 SKQTLNEFAKELRAFSSV-----DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S Q + E  +EL    ++     D+ G+  GD     +A++   N T   +    N I +
Sbjct: 3   SYQRMTERQRELHDKVNIAGGWHDLCGKQIGDAEAQAIAQAFKVNVTVTVLMLDNNRIGS 62

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L+ N  L  L LS N IG                            D GA 
Sbjct: 63  AGAQALAEALKVNKTLTGLYLSDNHIG----------------------------DAGAL 94

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N  L  L L  N I  +G  ++A AL  N+T+  L+L  N  G+ GA A+A 
Sbjct: 95  AIAEALKVNKRLTSLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNPIGSTGAQAIAD 154

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ N +L EL+   N IGD G +A+   L      L  L +  N     GA  +AE ++
Sbjct: 155 SLKVNNTLTELYFFRNQIGDAGAQAIADALEV-NSTLTTLILEKNQFGNAGATAIAEALR 213

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
              +L  +NL  N I D GA+ IA+A   N+T+TT+
Sbjct: 214 VNTTLTELNLSQNAIADAGAQMIAEAFNINKTLTTL 249



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 118/223 (52%), Gaps = 7/223 (3%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           W +L    IGD  A+ IA A K N T+T + L  N I S GA A+A  LK N  +T L L
Sbjct: 24  WHDLCGKQIGDAEAQAIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYL 83

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           + N IG  GA A++E LK +  + +L L   QIG +G + +A+ L+ N T+ +L L  N 
Sbjct: 84  SDNHIGDAGALAIAEALKVNKRLTSLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNP 143

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFN 570
           +     +G   ++       +L  + F+   I    GA+ +A + + VN  LT++ L  N
Sbjct: 144 IG---STGAQAIADSLKVNNTLTELYFFRNQIGD-AGAQAIADALE-VNSTLTTLILEKN 198

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +  + GA AIA+AL+ N    +T LNL+ N +   G   + +A
Sbjct: 199 QFGNAGATAIAEALRVN--TTLTELNLSQNAIADAGAQMIAEA 239



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 3/127 (2%)

Query: 157 FAKELRAFSSVDMS--GRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A  L+  ++++M   GRN  G  G   +A+SL  N T  E+ F  N I  AG +A    
Sbjct: 124 IANALKVNTTLEMLYLGRNPIGSTGAQAIADSLKVNNTLTELYFFRNQIGDAGAQAIADA 183

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L TL L  N  G+ G   + + L  N  +  L LS   + D GA+ IAE    N
Sbjct: 184 LEVNSTLTTLILEKNQFGNAGATAIAEALRVNTTLTELNLSQNAIADAGAQMIAEAFNIN 243

Query: 274 SILRVLE 280
             L  L+
Sbjct: 244 KTLTTLK 250


>gi|320170071|gb|EFW46970.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 668

 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 140/243 (57%), Gaps = 1/243 (0%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           R+ L+  D+  + A  IAE LK N  L+ LEL++N I  +G  ++  AL   ST+ +L L
Sbjct: 21  RVILARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSL 80

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           N N    +GA A+A+GL+ + +L EL +  N IGD G +A+ S L + K  L++L + NN
Sbjct: 81  NENKISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRN-KANLSILHLSNN 139

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            I   GAF +AE ++   +L  + ++ N IGD GA+ I  AL+   +++++ L  N I  
Sbjct: 140 KIGDIGAFAIAEGLQASTALTQLGMFTNQIGDGGAQAIGSALRNKASLSSLYLDVNRISD 199

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA A+A  L+ ++ +T L +  N IG  GA+A+   L+   N++ L L   QI AS  +
Sbjct: 200 IGACAVAEGLQTSTALTQLGMHTNQIGDAGAQAIGAALRNKANLSKLNLSDNQISASAVQ 259

Query: 490 FVA 492
            ++
Sbjct: 260 LIS 262



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 123/224 (54%), Gaps = 1/224 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L+ L LS N IGD G + +   L + + +  L L+   + D GA A+AE L+ +
Sbjct: 41  LKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKISDIGAFAVAEGLQAS 100

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L +  N I  +G  ++  AL   + +  LHL+ N  G +GA A+A+GL+ + +L 
Sbjct: 101 TALTELGMFINQIGDAGAQAIGSALRNKANLSILHLSNNKIGDIGAFAIAEGLQASTALT 160

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           +L +  N IGD G +A+ S L + K  L+ L +  N IS  GA  VAE ++   +L  + 
Sbjct: 161 QLGMFTNQIGDGGAQAIGSALRN-KASLSSLYLDVNRISDIGACAVAEGLQTSTALTQLG 219

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++ N IGD GA+ I  AL+    ++ ++L  N I +     I++
Sbjct: 220 MHTNQIGDAGAQAIGAALRNKANLSKLNLSDNQISASAVQLISK 263



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 1/192 (0%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+GL+ N +L+ L L  N IGD G +A+ S L + K  L  L +  N IS  GAF VAE
Sbjct: 37  IAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRN-KSTLIALSLNENKISDIGAFAVAE 95

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++   +L  + +++N IGD GA+ I  AL+    ++ + L  N I   GA AIA  L+ 
Sbjct: 96  GLQASTALTELGMFINQIGDAGAQAIGSALRNKANLSILHLSNNKIGDIGAFAIAEGLQA 155

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           ++ +T L +  N IG  GA+A+   L+   ++++L L   +I   GA  VA+ L+ +  +
Sbjct: 156 STALTQLGMFTNQIGDGGAQAIGSALRNKASLSSLYLDVNRISDIGACAVAEGLQTSTAL 215

Query: 502 SILDLRANGLRD 513
           + L +  N + D
Sbjct: 216 TQLGMHTNQIGD 227



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 1/207 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    GD G   +  +L    T   +S   N I+  G  A    LQ++ AL  L + 
Sbjct: 50  LELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKISDIGAFAVAEGLQASTALTELGMF 109

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + +   L + A +  L LS+  + D GA AIAE L+ ++ L  L +  N I
Sbjct: 110 INQIGDAGAQAIGSALRNKANLSILHLSNNKIGDIGAFAIAEGLQASTALTQLGMFTNQI 169

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  ++  AL   +++ SL+L+ N    +GA A+A+GL+ + +L +L +H N IGD G
Sbjct: 170 GDGGAQAIGSALRNKASLSSLYLDVNRISDIGACAVAEGLQTSTALTQLGMHTNQIGDAG 229

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISA 373
            +A+ + L + K  L+ L++ +N ISA
Sbjct: 230 AQAIGAALRN-KANLSKLNLSDNQISA 255



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 123/242 (50%), Gaps = 15/242 (6%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  + I+   A  +AE +K   +L ++ L  N IGD GA+ I  AL+   T+  + L  N
Sbjct: 24  LARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNEN 83

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA A+A  L+ ++ +T L +  N IG  GA+A+   L+   N++ L L   +IG 
Sbjct: 84  KISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKANLSILHLSNNKIGD 143

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  +A+ L+ +  ++ L +  N + D       G     SA+ +   +    L +N +
Sbjct: 144 IGAFAIAEGLQASTALTQLGMFTNQIGD------GGAQAIGSALRNKASLSSLYLDVNRI 197

Query: 546 Q--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL--KANEDVAVTSLNLANNF 601
              GA  +A+  +  + ALT + +  N+I D GA AI  AL  KAN    ++ LNL++N 
Sbjct: 198 SDIGACAVAEGLQ-TSTALTQLGMHTNQIGDAGAQAIGAALRNKAN----LSKLNLSDNQ 252

Query: 602 LT 603
           ++
Sbjct: 253 IS 254



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 9/231 (3%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E  +  KS   + L  +DI  + A  IA+ LK N  +  ++L  N I   GA AI   L+
Sbjct: 11  ELFEKAKSSSRVILARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALR 70

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           + S + +L L  N I   GA A++E L+    +  L +   QIG +GA+ +   LR    
Sbjct: 71  NKSTLIALSLNENKISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKAN 130

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           +SIL L  N + D    G   ++    A  +L  +  ++  I    GA+ +  + +  N+
Sbjct: 131 LSILHLSNNKIGD---IGAFAIAEGLQASTALTQLGMFTNQIGD-GGAQAIGSALR--NK 184

Query: 561 A-LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           A L+S+ L  N I D GA A+A+ L+ +   A+T L +  N +   G  A+
Sbjct: 185 ASLSSLYLDVNRISDIGACAVAEGLQTS--TALTQLGMHTNQIGDAGAQAI 233



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 65/135 (48%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S + +S    GD G F +AE L  +    ++    N I   G +A    L++  +L +L
Sbjct: 131 LSILHLSNNKIGDIGAFAIAEGLQASTALTQLGMFTNQIGDGGAQAIGSALRNKASLSSL 190

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I D G   + + L  +  + +L + +  + D GA+AI   L+N + L  L L++
Sbjct: 191 YLDVNRISDIGACAVAEGLQTSTALTQLGMHTNQIGDAGAQAIGAALRNKANLSKLNLSD 250

Query: 284 NMIDYSGFTSLAEAL 298
           N I  S    +++++
Sbjct: 251 NQISASAVQLISKSV 265


>gi|326430769|gb|EGD76339.1| hypothetical protein PTSG_11676 [Salpingoeca sp. ATCC 50818]
          Length = 445

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 181/362 (50%), Gaps = 9/362 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +T+ +  K  +  + +D +  N GD  L  +AE+L  N +  +++ +   ++  G +   
Sbjct: 7   KTIQDLEKNDQGKAELDFTDSNLGDAKLQKVAEALHKNSSVRKINLSGTNMSDIGARYIS 66

Query: 212 GVLQSNIA---LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
             L   +    + T+    NPIG +G + L   L     +  ++L++  L D GA AIA 
Sbjct: 67  DALAHKLTPTNVTTIIFDKNPIGPDGGQYLATALKQCLSLNTVKLNNCALGDNGAIAIAN 126

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L NN  +  LEL NN+I      + + A   N  +  L L  N   + GA  LA+GL  
Sbjct: 127 SLVNNDHIVTLELGNNLIGDQAARAFSRAFERNDCLEGLSLWKNAILSAGAQYLAEGLTR 186

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN--C 386
           N++L+ L L GN IG +G  +    L     ++  L +G NS++ +G  ++A  +K+  C
Sbjct: 187 NRTLQWLGLGGNKIGPDGALSFAQQLGHM--RIHWLGLGGNSLTDQGIIYIASALKDDGC 244

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             L  I L  N I D G EK+A AL  N  + ++ LGGN I ++G    + +L+ N+ + 
Sbjct: 245 -DLQSIGLGGNGITDHGVEKLARALWTNTRLESLGLGGNEISTEGCEFFSEMLRVNTTLK 303

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-RYNNTISILD 505
            L L+ N +  DG +AL++ L  +  + TL +        GA ++AD+L R N  + +LD
Sbjct: 304 KLILSSNLVDDDGLRALADGLTVNNTLETLLVAANPFTDVGALYLADILCRSNTCLQVLD 363

Query: 506 LR 507
           + 
Sbjct: 364 IH 365



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 149/296 (50%), Gaps = 6/296 (2%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN---SILRVL 279
           L+ + + +GD  ++ + + L  N+ V ++ LS  ++ D GA+ I++ L +    + +  +
Sbjct: 22  LDFTDSNLGDAKLQKVAEALHKNSSVRKINLSGTNMSDIGARYISDALAHKLTPTNVTTI 81

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             + N I   G   LA AL +  ++ ++ LN    G  GA A+A  L  N  +  L L  
Sbjct: 82  IFDKNPIGPDGGQYLATALKQCLSLNTVKLNNCALGDNGAIAIANSLVNNDHIVTLELGN 141

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD+  RA       R   L  L +  N+I + GA ++AE +   ++L W+ L  N I
Sbjct: 142 NLIGDQAARAFSRAFE-RNDCLEGLSLWKNAILSAGAQYLAEGLTRNRTLQWLGLGGNKI 200

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGAD 458
           G +GA   A  L   R I  + LGGN++  +G   IA  LKD+   + S+ L  N I   
Sbjct: 201 GPDGALSFAQQLGHMR-IHWLGLGGNSLTDQGIIYIASALKDDGCDLQSIGLGGNGITDH 259

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           G + L+  L  +  + +L LG  +I   G EF ++MLR N T+  L L +N + D+
Sbjct: 260 GVEKLARALWTNTRLESLGLGGNEISTEGCEFFSEMLRVNTTLKKLILSSNLVDDD 315



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 164/356 (46%), Gaps = 17/356 (4%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           +K I +L KN+     L+  ++ +  +    +AEAL +NS++R ++L+G     +GA  +
Sbjct: 6   SKTIQDLEKNDQGKAELDFTDSNLGDAKLQKVAEALHKNSSVRKINLSGTNMSDIGARYI 65

Query: 323 AKGLEGN---KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           +  L       ++  +    N IG +G + L + L      L  + + N ++   GA  +
Sbjct: 66  SDALAHKLTPTNVTTIIFDKNPIGPDGGQYLATALKQCL-SLNTVKLNNCALGDNGAIAI 124

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  + N   ++ + L  N IGD+ A   + A ++N  +  + L  N I S GA  +A  L
Sbjct: 125 ANSLVNNDHIVTLELGNNLIGDQAARAFSRAFERNDCLEGLSLWKNAILSAGAQYLAEGL 184

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N  +  L L  N IG DGA + ++ L  H  I+ L LG   +   G  ++A  L+ + 
Sbjct: 185 TRNRTLQWLGLGGNKIGPDGALSFAQQLG-HMRIHWLGLGGNSLTDQGIIYIASALKDDG 243

Query: 500 T-ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
             +  + L  NG+ D      +G+     A+++   +    L  N +  +G +  ++  +
Sbjct: 244 CDLQSIGLGGNGITD------HGVEKLARALWTNTRLESLGLGGNEISTEGCEFFSEMLR 297

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            VN  L  + L+ N + DDG  A+A  L  N    + +L +A N  T  G   L D
Sbjct: 298 -VNTTLKKLILSSNLVDDDGLRALADGLTVNN--TLETLLVAANPFTDVGALYLAD 350



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 2/216 (0%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G  +LAE L  N+T + +    N I   G  +F   L  ++ +  L L GN + D+G+  
Sbjct: 176 GAQYLAEGLTRNRTLQWLGLGGNKIGPDGALSFAQQL-GHMRIHWLGLGGNSLTDQGIIY 234

Query: 238 LCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           +   L D+   ++ + L    + D G + +A  L  N+ L  L L  N I   G    +E
Sbjct: 235 IASALKDDGCDLQSIGLGGNGITDHGVEKLARALWTNTRLESLGLGGNEISTEGCEFFSE 294

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            L  N+T++ L L+ N     G  ALA GL  N +L  L +  N   D G   L   L  
Sbjct: 295 MLRVNTTLKKLILSSNLVDDDGLRALADGLTVNNTLETLLVAANPFTDVGALYLADILCR 354

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
               L VLDI +  +S  G   V + ++   SL ++
Sbjct: 355 SNTCLQVLDIHDADMSPAGEQQVVDQLRKDSSLHFL 390


>gi|32966217|gb|AAP92145.1| leucine-rich repeat protein N6C [synthetic construct]
          Length = 415

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 164/325 (50%), Gaps = 4/325 (1%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           E++    N +T AG+K    VL+SN +L+ L+LS N +GD GV+ L   L+D    +E L
Sbjct: 42  EQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLESL 101

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
           +L S DL + G K +A +L++N  LR L L+ N +  +G   L + LL+  T +  L LN
Sbjct: 102 KLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKLDLN 161

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                  G   LA  L  N SLREL L  N +GD G+R L+ GL     +L  L + +N 
Sbjct: 162 DTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDND 221

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++  G   +A  +++  SL  +NL  N +GD G   +   L    T +  + L   ++  
Sbjct: 222 LTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTE 281

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGA 488
            G   +A VL+ N  +  L L+ N +G  G + L + L   G  +  L L    +  +G 
Sbjct: 282 AGVEDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGM 341

Query: 489 EFVADMLRYNNTISILDLRANGLRD 513
           + +A +LR N ++  L L  N L D
Sbjct: 342 KDLASVLRSNPSLRELSLSTNKLGD 366



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 159/317 (50%), Gaps = 7/317 (2%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKA 209
           L + A  LR+  S+    +S    GD G+  L + L    T  E +   +  +T AG+K 
Sbjct: 56  LKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLESLKLQSTDLTEAGLKD 115

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAE 268
              VL+SN +L+ LNLS N +GD GV+ L   L+D    +E+L L+  DL + G K +A 
Sbjct: 116 LASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVKDLAS 175

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLE 327
           +L++N  LR L L+ N +  +G   L + LL+  T +  L+L  N     G   LA  L 
Sbjct: 176 VLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLASVLR 235

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N SLREL+L  N +GD G+R L+ GL     +L  L + N  ++  G   +A  +++  
Sbjct: 236 SNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVLRSNP 295

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           SL  ++L  N +GD G   +   L    T +  + L   ++   G   +A VL+ N  + 
Sbjct: 296 SLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGMKDLASVLRSNPSLR 355

Query: 447 SLDLAYNPIGADGAKAL 463
            L L+ N +G  G + L
Sbjct: 356 ELSLSTNKLGDAGVRLL 372



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 165/346 (47%), Gaps = 15/346 (4%)

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-I 304
           A +E+L+L+  DL + G K +A +L++N  LR L L+NN +  +G   L + LL+  T +
Sbjct: 39  ARLEQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRL 98

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            SL L        G   LA  L  N SLREL+L  N +GD G+R L+ GL     +L  L
Sbjct: 99  ESLKLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKL 158

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLG 423
           D+ +  ++  G   +A  +++  SL  ++L  N +GD G   +   L    T +  + L 
Sbjct: 159 DLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLE 218

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQ 482
            N++   G   +A VL+ N  +  L+L+ N +G  G + L + L   G  +  L+L    
Sbjct: 219 DNDLTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTD 278

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYS----LKHMLFY 538
           +  +G E +A +LR N ++  L L  N L      G  G+      +      L+ +   
Sbjct: 279 LTEAGVEDLASVLRSNPSLRELSLSNNKL------GDAGVRLLLQGLLDPGTRLEKLYLR 332

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           +  +    G K LA   +  N +L  + L+ N++ D G   + Q L
Sbjct: 333 NTDLTE-AGMKDLASVLR-SNPSLRELSLSTNKLGDAGVRLLLQGL 376



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAAGIKAFDGVLQSNIALK 221
           +   + +S    GD G+  L + L    T  E  +  N  +T AG+K    VL+SN +L+
Sbjct: 296 SLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGMKDLASVLRSNPSLR 355

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            L+LS N +GD GV+ L   L+D    +E+L L  +   +E    +  L K+   LRV+
Sbjct: 356 ELSLSTNKLGDAGVRLLLQGLLDPGTRLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 414


>gi|402907479|ref|XP_003916502.1| PREDICTED: protein NLRC3-like, partial [Papio anubis]
          Length = 333

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/333 (34%), Positives = 167/333 (50%), Gaps = 34/333 (10%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL L  N
Sbjct: 1   LQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSSN 60

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           SIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N I 
Sbjct: 61  SIGDGGSKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSIS 119

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            EG + IA AL  N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  A
Sbjct: 120 PEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAA 179

Query: 461 KALSEVLKFHGNINTLK------------------------LGWCQIGASGAEFVADMLR 496
           +AL + L+ + ++ +L                         L    IGA GA+ + + L 
Sbjct: 180 QALGQALQLNRSLTSLXXXXXXXXXXXXXXXXXXTALTALYLQVASIGAPGAQVLGEALA 239

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQS 554
            N T+ ILDLR N +      G +G     +A+     +   +L  N L   GA C+A +
Sbjct: 240 VNRTLEILDLRGNAI------GVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATA 293

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
               N  L  I+L  N I D GA  I++A+K N
Sbjct: 294 LSG-NHRLQHINLQGNHIGDSGARMISEAIKTN 325



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 151/330 (45%), Gaps = 5/330 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK L LS N
Sbjct: 1   LQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSSN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L  N I  
Sbjct: 61  SIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISP 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++A AL  NST+++L L  N     GA A+A  +  N +L  LHL  N I     +
Sbjct: 121 EGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAAQ 180

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L   +   ++                        +L  + L +  IG  GA+ + 
Sbjct: 181 ALGQALQLNRSLTSL-----XXXXXXXXXXXXXXXXXXTALTALYLQVASIGAPGAQVLG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G  GA  ++  L 
Sbjct: 236 EALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALS 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            +  +  + L    IG SGA  +++ ++ N
Sbjct: 296 GNHRLQHINLQGNHIGDSGARMISEAIKTN 325



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 53/308 (17%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           +RD+GA+++AE L +N  L VL L  N I   G   +A+AL +N +++ L L+ N  G  
Sbjct: 6   VRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSSNSIGDG 65

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G+ ALA+ L+ N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +G  
Sbjct: 66  GSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGGQ 124

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN------------ 425
            +A  +    +L  ++L  N + D+GA+ IA A+++N T+T++ L  N            
Sbjct: 125 AIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAAQALGQ 184

Query: 426 ----------------------------------------NIHSKGASAIARVLKDNSVI 445
                                                   +I + GA  +   L  N  +
Sbjct: 185 ALQLNRSLTSLXXXXXXXXXXXXXXXXXXTALTALYLQVASIGAPGAQVLGEALAVNRTL 244

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             LDL  N IG  GAKAL+  LK + ++  L L    +G  GA  VA  L  N+ +  ++
Sbjct: 245 EILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHIN 304

Query: 506 LRANGLRD 513
           L+ N + D
Sbjct: 305 LQGNHIGD 312



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 151/313 (48%), Gaps = 25/313 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  S + +   + G  G   +A++L  N++ +E+  ++N I   G KA    L+ N  L+
Sbjct: 22  RTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSSNSIGDGGSKALAEALKVNQGLE 81

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+L  N I D GV  L   L  N  +  L L    +  EG +AIA  L  NS L+ L+L
Sbjct: 82  SLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDL 141

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------- 334
             N++   G  ++A A+ EN T+ SLHL  N+  A  A AL + L+ N+SL         
Sbjct: 142 TANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLXXXXXX 201

Query: 335 -----------------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
                            L+L   SIG  G + L   L+  +  L +LD+  N+I   GA 
Sbjct: 202 XXXXXXXXXXXXTALTALYLQVASIGAPGAQVLGEALAVNR-TLEILDLRGNAIGVSGAK 260

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +K   SL  +NL  N +G  GA  +A AL  N  +  I+L GN+I   GA  I+ 
Sbjct: 261 ALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINLQGNHIGDSGARMISE 320

Query: 438 VLKDNSVITSLDL 450
            +K N+   ++++
Sbjct: 321 AIKTNAPTCTVEM 333



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 24/290 (8%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L GN++ D+G R++   L+S +  L+VL +  NSI   GA  +A+ +K  +SL  + L  
Sbjct: 1   LQGNTVRDDGARSMAEALASNR-TLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSS 59

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGD G++ +A+ALK N+ + ++DL  N+I   G +A+   L  N  + SL L  N I 
Sbjct: 60  NSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSIS 119

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            +G +A++  L  +  +  L L    +   GA+ +A  +R N+T++ L L+ N ++    
Sbjct: 120 PEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAA 179

Query: 517 SGCNGLSFFHSAIYSL-------------KHMLFYSLCINYLQ-------GAKCLAQSFK 556
                    + ++ SL                   +L   YLQ       GA+ L ++  
Sbjct: 180 QALGQALQLNRSLTSLXXXXXXXXXXXXXXXXXXTALTALYLQVASIGAPGAQVLGEAL- 238

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            VN  L  +DL  N I   GA A+A ALK N   ++  LNL  N L   G
Sbjct: 239 AVNRTLEILDLRGNAIGVSGAKALANALKVNS--SLRRLNLQENSLGMGG 286


>gi|320168903|gb|EFW45802.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 792

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 172/349 (49%), Gaps = 52/349 (14%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L    + DE  KAIAE LK ++ L  L L+ N I  +G  ++AEAL  N T+ SL L  N
Sbjct: 27  LDGKQIDDEQTKAIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLSLGVN 86

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL---------MSGLSSRKGKLAV 363
             G +GA A+A+ L  NK+L+EL L  N I + GI  L         +S     K   A 
Sbjct: 87  QIGDVGAQAIAEVLTANKTLKELGLDQNFISENGINVLKQIGDKTFFLSADDQSKPSSAQ 146

Query: 364 L-DIGNNSISAKGAFHVAEYIKNCKSLLW---------INLYMNDIGDEGAEKIADALKQ 413
           L ++ + +   + +  + + I   +  L+         ++L+  +IGDE A+ IA+ALK 
Sbjct: 147 LQEMASRAAQTRPSVLLYQIINQRQRELYDEVMNASGTLHLFEYEIGDEEAKAIAEALKV 206

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N  ++ ++L  N I   GA AIA  L  N+ +T L L  N IG  GA+A++E LK +  +
Sbjct: 207 NTKLSWLNLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIAEALKVNTKL 266

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
             L L + QIG +GA+ +A+ L+ N T++   L  N + D                    
Sbjct: 267 TLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDA------------------- 307

Query: 534 HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
                        GA+ +A++ KV N+ LT +DL  N I D+G  A+ Q
Sbjct: 308 -------------GAQAIAEALKV-NKKLTKLDLDQNFISDNGIKALRQ 342



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 149/312 (47%), Gaps = 23/312 (7%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L G  I DE  K + + L  +  +  L L    + D GA+AIAE LK N  L  L L 
Sbjct: 25  LFLDGKQIDDEQTKAIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLSLG 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G  ++AE L  N T++ L L+ N+    G N L +   G+K+        +  
Sbjct: 85  VNQIGDVGAQAIAEVLTANKTLKELGLDQNFISENGINVLKQI--GDKTFFLSADDQSKP 142

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNS--------ISAKGAFHVAEY------------ 382
               ++ + S  +  +  + +  I N          ++A G  H+ EY            
Sbjct: 143 SSAQLQEMASRAAQTRPSVLLYQIINQRQRELYDEVMNASGTLHLFEYEIGDEEAKAIAE 202

Query: 383 -IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K    L W+NL  N IGD GA+ IA+ L  N T+T + L  N I   GA AIA  LK 
Sbjct: 203 ALKVNTKLSWLNLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIAEALKV 262

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +T L L YN IG  GA+A++E LK +  +    L   QIG +GA+ +A+ L+ N  +
Sbjct: 263 NTKLTLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDAGAQAIAEALKVNKKL 322

Query: 502 SILDLRANGLRD 513
           + LDL  N + D
Sbjct: 323 TKLDLDQNFISD 334



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 153/327 (46%), Gaps = 38/327 (11%)

Query: 144 GKLFRESKQTLNEFAKEL-------RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
           G LF + KQ  +E  K +          + + + G   GD G   +AE+L  N+T   +S
Sbjct: 23  GVLFLDGKQIDDEQTKAIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLS 82

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
              N I   G +A   VL +N  LK L L  N I + G+  L  I     G +   LS+ 
Sbjct: 83  LGVNQIGDVGAQAIAEVLTANKTLKELGLDQNFISENGINVLKQI-----GDKTFFLSAD 137

Query: 257 DLRDEGAKAIAELLK-----NNSIL-------RVLELNNNMIDYSGF------------- 291
           D     +  + E+         S+L       R  EL + +++ SG              
Sbjct: 138 DQSKPSSAQLQEMASRAAQTRPSVLLYQIINQRQRELYDEVMNASGTLHLFEYEIGDEEA 197

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++AEAL  N+ +  L+L  N  G +GA A+A+GL  N +L EL L+ N IGD G +A+ 
Sbjct: 198 KAIAEALKVNTKLSWLNLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIA 257

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L     KL +L +  N I   GA  +AE +K  K+L    L  N IGD GA+ IA+AL
Sbjct: 258 EALKVNT-KLTLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDAGAQAIAEAL 316

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARV 438
           K N+ +T +DL  N I   G  A+ +V
Sbjct: 317 KVNKKLTKLDLDQNFISDNGIKALRQV 343



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 1/158 (0%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  L  LNL+ N IGD G + + + L  N  +  L L+   + D GA+AIA
Sbjct: 198 KAIAEALKVNTKLSWLNLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIA 257

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E LK N+ L +L L+ N I  +G  ++AEAL  N T+   +L+ N  G  GA A+A+ L+
Sbjct: 258 EALKVNTKLTLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDAGAQAIAEALK 317

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            NK L +L L  N I D GI+AL   + +R  +L +L+
Sbjct: 318 VNKKLTKLDLDQNFISDNGIKALRQ-VGNRTCQLNILN 354



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 115/257 (44%), Gaps = 27/257 (10%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           VL +    I  +    +AE +K    L  ++L  N IGD GA+ IA+ALK N+T+ ++ L
Sbjct: 24  VLFLDGKQIDDEQTKAIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLSL 83

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV------LKFHGNINTL 476
           G N I   GA AIA VL  N  +  L L  N I  +G   L ++      L         
Sbjct: 84  GVNQIGDVGAQAIAEVLTANKTLKELGLDQNFISENGINVLKQIGDKTFFLSADDQSKPS 143

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
                ++ +  A+    +L Y     I++ R   L DEV +    L  F   I       
Sbjct: 144 SAQLQEMASRAAQTRPSVLLYQ----IINQRQRELYDEVMNASGTLHLFEYEIGD----- 194

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                    + AK +A++ K VN  L+ ++LA N+I D GA AIA+ L  N    +T L 
Sbjct: 195 ---------EEAKAIAEALK-VNTKLSWLNLAENQIGDVGAQAIAEGLTVN--TTLTELF 242

Query: 597 LANNFLTKFGQSALTDA 613
           L  N +   G  A+ +A
Sbjct: 243 LNRNQIGDVGAQAIAEA 259



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 47/107 (43%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  N     +S   N I  AG +A    L+ N  L    L  N IGD
Sbjct: 247 QIGDVGAQAIAEALKVNTKLTLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGD 306

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            G + + + L  N  + +L L    + D G KA+ ++      L +L
Sbjct: 307 AGAQAIAEALKVNKKLTKLDLDQNFISDNGIKALRQVGNRTCQLNIL 353


>gi|440792441|gb|ELR13663.1| leucine rich repeat containing protein [Acanthamoeba castellanii str.
            Neff]
          Length = 1544

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 169/348 (48%), Gaps = 17/348 (4%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+D+ G    D G   LA  L    T        N +   G +A    L  N ++ 
Sbjct: 742  RQLTSLDIRGNEIDDRGTVDLARFLATTDTLRYFDLRWNKVGVVGARAVAQALAHNTSVG 801

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQL-------SSVDLR-----DEGAKAIAEL 269
             +NL  N +G +GV  L D L+ N  V  L L       + ++ R     DE  K +  L
Sbjct: 802  IVNLRENRLGMDGVMTLADFLLTNRSVYSLDLRANISPPTEMNYRIGESGDEAIKYLGAL 861

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
            LK NS +  L+L +N I   G  +LA AL   S++  LHL+ N     G  AL + L  N
Sbjct: 862  LKLNSTVTHLDLCSNSIGSEGAMALASALEFRSSLYILHLDFNKIDFAGVRALGRSLLVN 921

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L L  N + D+ + AL   L++    L  LD+  N +S KGA  +AE +K  ++L
Sbjct: 922  QSLLVLTLAHNFLEDDAVCALAKALAT-NATLTKLDLQKNHVSNKGASALAEALKTNQTL 980

Query: 390  LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
              + L  N +GD GA ++ADALK N  + +++L  N I S+G  A A +L  N+ +   +
Sbjct: 981  TELYLSYNGVGDAGAYRLADALKHNDGLLSLELENNKITSRGGKAFASMLARNTTLRFFN 1040

Query: 450  LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI-GASGAEFVADMLR 496
            L+ N I  +G  A+S  L  +   + L L   Q+ G  G +   D+LR
Sbjct: 1041 LSGNLITDEGLTAISRALMSNRASSLLDL---QVSGVDGRDECWDVLR 1085



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 170/359 (47%), Gaps = 49/359 (13%)

Query: 202  ITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
             ++ GI     VL   ++ +K+L+L GN +GD G+  L D+L    G    QL+S+D+R 
Sbjct: 694  FSSKGIALLGEVLSVPSVVVKSLDLRGNRLGDGGIDRLADLLC--TGALGRQLTSLDIRG 751

Query: 261  E---------------------------------GAKAIAELLKNNSILRVLELNNNMID 287
                                              GA+A+A+ L +N+ + ++ L  N + 
Sbjct: 752  NEIDDRGTVDLARFLATTDTLRYFDLRWNKVGVVGARAVAQALAHNTSVGIVNLRENRLG 811

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYG---------GALGANA---LAKGLEGNKSLREL 335
              G  +LA+ LL N ++ SL L  N           G  G  A   L   L+ N ++  L
Sbjct: 812  MDGVMTLADFLLTNRSVYSLDLRANISPPTEMNYRIGESGDEAIKYLGALLKLNSTVTHL 871

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  NSIG EG  AL S L  R   L +L +  N I   G   +   +   +SLL + L 
Sbjct: 872  DLCSNSIGSEGAMALASALEFRS-SLYILHLDFNKIDFAGVRALGRSLLVNQSLLVLTLA 930

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N + D+    +A AL  N T+T +DL  N++ +KGASA+A  LK N  +T L L+YN +
Sbjct: 931  HNFLEDDAVCALAKALATNATLTKLDLQKNHVSNKGASALAEALKTNQTLTELYLSYNGV 990

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            G  GA  L++ LK +  + +L+L   +I + G +  A ML  N T+   +L  N + DE
Sbjct: 991  GDAGAYRLADALKHNDGLLSLELENNKITSRGGKAFASMLARNTTLRFFNLSGNLITDE 1049



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 112/240 (46%), Gaps = 17/240 (7%)

Query: 121  SKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLF 180
            S PT   MN+ +G   +    + G L +     LN     L      D+   + G EG  
Sbjct: 838  SPPTE--MNYRIGESGDEAIKYLGALLK-----LNSTVTHL------DLCSNSIGSEGAM 884

Query: 181  FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
             LA +L +  +   +    N I  AG++A    L  N +L  L L+ N + D+ V  L  
Sbjct: 885  ALASALEFRSSLYILHLDFNKIDFAGVRALGRSLLVNQSLLVLTLAHNFLEDDAVCALAK 944

Query: 241  ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
             L  NA + +L L    + ++GA A+AE LK N  L  L L+ N +  +G   LA+AL  
Sbjct: 945  ALATNATLTKLDLQKNHVSNKGASALAEALKTNQTLTELYLSYNGVGDAGAYRLADALKH 1004

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI----RALMSGLSS 356
            N  + SL L  N   + G  A A  L  N +LR  +L GN I DEG+    RALMS  +S
Sbjct: 1005 NDGLLSLELENNKITSRGGKAFASMLARNTTLRFFNLSGNLITDEGLTAISRALMSNRAS 1064



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 7/138 (5%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGI----KAFDGVLQSNIALK---TLNLSGNPIGDEG 234
            L+ +L  N     +  + N + AA I    +A D   Q+N  L    TL L GN + DEG
Sbjct: 1373 LSRALARNGNLTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQDEG 1432

Query: 235  VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            V  L   L++N  V  L L +  + DEG KA+ +L+  N +L  L L +N I   G  +L
Sbjct: 1433 VAVLARSLLNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLAL 1492

Query: 295  AEALLENSTIRSLHLNGN 312
              AL  N +I  L L  N
Sbjct: 1493 GAALRHNRSIVKLSLERN 1510



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-------LLWINLYMNDI 399
            +R+L   L+ R G L  LD+  N + A     +AE + N +        L  + L  N +
Sbjct: 1370 MRSLSRALA-RNGNLTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRL 1428

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             DEG   +A +L  N T+TT++L  N I  +G  A+  ++  N V+  L L  N I  +G
Sbjct: 1429 QDEGVAVLARSLLNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEG 1488

Query: 460  AKALSEVLKFHGNINTLKL 478
              AL   L+ + +I  L L
Sbjct: 1489 LLALGAALRHNRSIVKLSL 1507



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 36/187 (19%)

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-------LRELHLHGN 340
            Y    SL+ AL  N  + SL L+ N   A     LA+ L+  +        L  L L GN
Sbjct: 1367 YRFMRSLSRALARNGNLTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGN 1426

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             + DEG+  L   L                            + NC ++  +NL  N I 
Sbjct: 1427 RLQDEGVAVLARSL----------------------------LNNC-TVTTLNLDTNRIT 1457

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            DEG + + D +  N  +  + L  N I  +G  A+   L+ N  I  L L  NP+  +  
Sbjct: 1458 DEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLALGAALRHNRSIVKLSLERNPLEREAV 1517

Query: 461  KALSEVL 467
             A  ++L
Sbjct: 1518 AAFWQLL 1524



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 55/117 (47%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            L   +++ + G    DEG+  LA SL  N T   ++   N IT  GIKA + ++  N  L
Sbjct: 1415 LSLLTTLVLRGNRLQDEGVAVLARSLLNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVL 1474

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L+L  N I  EG+  L   L  N  + +L L    L  E   A  +LL + ++ R
Sbjct: 1475 AFLSLVSNGIKGEGLLALGAALRHNRSIVKLSLERNPLEREAVAAFWQLLASVNLQR 1531



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 392  INLYMNDIGDEGAEKIADALKQNRT-------ITTIDLGGNNIHSKGASAIARVLKDNSV 444
            ++L  N +       +A+AL   R        +TT+ L GN +  +G + +AR L +N  
Sbjct: 1386 LDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQDEGVAVLARSLLNNCT 1445

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +T+L+L  N I  +G KA+ +++  +  +  L L    I   G   +   LR+N +I  L
Sbjct: 1446 VTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLALGAALRHNRSIVKL 1505

Query: 505  DLRANGLRDEVCS 517
             L  N L  E  +
Sbjct: 1506 SLERNPLEREAVA 1518



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 7/142 (4%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAE-------EVSFAANGITAAGIKAFDGVLQS 216
             +S+D+S        +  LAE+L   + A         +    N +   G+      L +
Sbjct: 1383 LTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQDEGVAVLARSLLN 1442

Query: 217  NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            N  + TLNL  N I DEG+K + D++  N  +  L L S  ++ EG  A+   L++N  +
Sbjct: 1443 NCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLALGAALRHNRSI 1502

Query: 277  RVLELNNNMIDYSGFTSLAEAL 298
              L L  N ++     +  + L
Sbjct: 1503 VKLSLERNPLEREAVAAFWQLL 1524



 Score = 42.7 bits (99), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 7/157 (4%)

Query: 207  IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD----NAGVERLQ---LSSVDLR 259
            +++    L  N  L +L+LS N +    +  L + L +    NAG+  L    L    L+
Sbjct: 1370 MRSLSRALARNGNLTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQ 1429

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            DEG   +A  L NN  +  L L+ N I   G  ++ + +  N  +  L L  N     G 
Sbjct: 1430 DEGVAVLARSLLNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGL 1489

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
             AL   L  N+S+ +L L  N +  E + A    L+S
Sbjct: 1490 LALGAALRHNRSIVKLSLERNPLEREAVAAFWQLLAS 1526


>gi|330791723|ref|XP_003283941.1| hypothetical protein DICPUDRAFT_45148 [Dictyostelium purpureum]
 gi|325086099|gb|EGC39494.1| hypothetical protein DICPUDRAFT_45148 [Dictyostelium purpureum]
          Length = 686

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 223/483 (46%), Gaps = 45/483 (9%)

Query: 153 TLNEFAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           +L EF+  L+   +   +D+S      E    LA  L  N + E ++ + N + + G   
Sbjct: 218 SLGEFSDILKTNFSLKHLDLSSNQINGEAATKLANCLKCNHSIETLNLSFNDMKSVGSVQ 277

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L+ N ++ +LN S N   +EG     +++ DN  +  L LSS  +  E    IAE 
Sbjct: 278 IANCLKVNQSIASLNFSSNFPDEEGTHAFAEMIRDNHSLTSLNLSSNRISFERVPLIAEA 337

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL--E 327
           L  N  L  L L  N+I+  G   +A  L +NS++  ++ + N    +GA  +AK +   
Sbjct: 338 LAKNKTLLHLNLQRNLIEGRGSEFIAHGLSKNSSLTDINFSSNKFSNIGATLIAKAIAFN 397

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNC 386
            N  +  + L+ NSI   G  A  S +      +  LD+  N I +     +++ ++ N 
Sbjct: 398 PNTKITNIDLNSNSIESSGAIA-FSDIVLYNKSVTNLDLSINWIDSSALMDISQAFLNNS 456

Query: 387 K-SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             S+  I+L  N I + GA  +  AL  N ++  ++L  NN+  +GA  +++ ++ NS +
Sbjct: 457 NSSIKSIDLSNNTICERGAGYLGKALLSNCSLKHLNLFCNNLEKQGAIELSKSIEMNSTL 516

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           TSL+L+ N IG  G ++LS  L  + +I ++ L    I   GA+++  +L  NNTI  LD
Sbjct: 517 TSLELSSNLIGDGGLESLSAALIKNKSIVSISLSQSSITVEGAQYLVPLLEKNNTIEFLD 576

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSI 565
           L  N +                                   GA+ +++  K  N+ +TS+
Sbjct: 577 LSYNSIGP--------------------------------IGAQKISEPLK-TNKTITSL 603

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEV 625
           DL+ N I D GA AI++    N    +  L+L NN +   G  ++ D  +L+   S   +
Sbjct: 604 DLSSNSIGDQGASAISEIFPLNS--TLKRLSLYNNKIGSIGAISIVD--NLIKNHSLYSI 659

Query: 626 NIF 628
           N+ 
Sbjct: 660 NLL 662



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 193/393 (49%), Gaps = 11/393 (2%)

Query: 128 MNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG 187
           +N S+ A  N  S F  +   E      E  ++  + +S+++S      E +  +AE+L 
Sbjct: 284 VNQSI-ASLNFSSNFPDE---EGTHAFAEMIRDNHSLTSLNLSSNRISFERVPLIAEALA 339

Query: 188 YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV--DN 245
            N+T   ++   N I   G +     L  N +L  +N S N   + G   +   +    N
Sbjct: 340 KNKTLLHLNLQRNLIEGRGSEFIAHGLSKNSSLTDINFSSNKFSNIGATLIAKAIAFNPN 399

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL--ENST 303
             +  + L+S  +   GA A ++++  N  +  L+L+ N ID S    +++A L   NS+
Sbjct: 400 TKITNIDLNSNSIESSGAIAFSDIVLYNKSVTNLDLSINWIDSSALMDISQAFLNNSNSS 459

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           I+S+ L+ N     GA  L K L  N SL+ L+L  N++  +G   L   +      L  
Sbjct: 460 IKSIDLSNNTICERGAGYLGKALLSNCSLKHLNLFCNNLEKQGAIELSKSIE-MNSTLTS 518

Query: 364 LDIGNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           L++ +N I   G   + A  IKN KS++ I+L  + I  EGA+ +   L++N TI  +DL
Sbjct: 519 LELSSNLIGDGGLESLSAALIKN-KSIVSISLSQSSITVEGAQYLVPLLEKNNTIEFLDL 577

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N+I   GA  I+  LK N  ITSLDL+ N IG  GA A+SE+   +  +  L L   +
Sbjct: 578 SYNSIGPIGAQKISEPLKTNKTITSLDLSSNSIGDQGASAISEIFPLNSTLKRLSLYNNK 637

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           IG+ GA  + D L  N+++  ++L AN +   +
Sbjct: 638 IGSIGAISIVDNLIKNHSLYSINLLANRIDSSI 670



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 5/305 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAE--EVSFAANGITAAGIKAFDGVLQSNIAL 220
           + + ++ S   F + G   +A+++ +N   +   +   +N I ++G  AF  ++  N ++
Sbjct: 371 SLTDINFSSNKFSNIGATLIAKAIAFNPNTKITNIDLNSNSIESSGAIAFSDIVLYNKSV 430

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNA--GVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L+LS N I    +  +    ++N+   ++ + LS+  + + GA  + + L +N  L+ 
Sbjct: 431 TNLDLSINWIDSSALMDISQAFLNNSNSSIKSIDLSNNTICERGAGYLGKALLSNCSLKH 490

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N ++  G   L++++  NST+ SL L+ N  G  G  +L+  L  NKS+  + L 
Sbjct: 491 LNLFCNNLEKQGAIELSKSIEMNSTLTSLELSSNLIGDGGLESLSAALIKNKSIVSISLS 550

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            +SI  EG + L+  L  +   +  LD+  NSI   GA  ++E +K  K++  ++L  N 
Sbjct: 551 QSSITVEGAQYLVPLLE-KNNTIEFLDLSYNSIGPIGAQKISEPLKTNKTITSLDLSSNS 609

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD+GA  I++    N T+  + L  N I S GA +I   L  N  + S++L  N I + 
Sbjct: 610 IGDQGASAISEIFPLNSTLKRLSLYNNKIGSIGAISIVDNLIKNHSLYSINLLANRIDSS 669

Query: 459 GAKAL 463
             K +
Sbjct: 670 ILKRI 674



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 96/184 (52%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N   +G   L++S+  N T   +  ++N I   G+++    L  N ++ +++LS + I  
Sbjct: 497 NLEKQGAIELSKSIEMNSTLTSLELSSNLIGDGGLESLSAALIKNKSIVSISLSQSSITV 556

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EG + L  +L  N  +E L LS   +   GA+ I+E LK N  +  L+L++N I   G +
Sbjct: 557 EGAQYLVPLLEKNNTIEFLDLSYNSIGPIGAQKISEPLKTNKTITSLDLSSNSIGDQGAS 616

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +++E    NST++ L L  N  G++GA ++   L  N SL  ++L  N I    ++ ++ 
Sbjct: 617 AISEIFPLNSTLKRLSLYNNKIGSIGAISIVDNLIKNHSLYSINLLANRIDSSILKRILK 676

Query: 353 GLSS 356
            L S
Sbjct: 677 RLES 680


>gi|440791605|gb|ELR12843.1| NLR family, CARD domain containing 3, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 341

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 175/342 (51%), Gaps = 17/342 (4%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           EG  A+   L+    +R L+L +N I  +G  SLA+ +  +  + +L L GN+ G  G  
Sbjct: 6   EGGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPAGMR 65

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L+  LEGN ++  L + GN +G EG +AL S L++ +    V   GNN +  +G   +A
Sbjct: 66  ELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNN-LDNEGVAALA 124

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-------ITTIDLGGNNIHSKGAS 433
           E ++   ++  +NL +N I D GA+ IA  L  N+        +T +DLG N+I   GA 
Sbjct: 125 EALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQVGAR 184

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           ++A +LK N V+  L L  N I A+G   L E L+ +  +  L +  C +  +G   +A 
Sbjct: 185 SLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTSIAA 244

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY--LQGAKCL 551
           +LR N T+  L ++ NGL  +   G   L+        LK +    LC N   L GA  L
Sbjct: 245 LLRKNATLEELIVKKNGLTSQ---GVQSLADGLKRNLVLKKL---DLCENRIDLDGAVAL 298

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 593
           A+ F++ N  LT + LA N + D+G FA+ +A   N  +  T
Sbjct: 299 AEIFRL-NNGLTHVKLAGNALTDEGVFALKEAATRNTKLTYT 339



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 155/312 (49%), Gaps = 8/312 (2%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G EG   L  +L        +   +NGI  AG  +    + ++  L TL+L GN IG  
Sbjct: 3   LGVEGGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPA 62

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G++ L   L  N  V  L +S   L  EG KA+A LL  N  L+ +  + N +D  G  +
Sbjct: 63  GMRELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAA 122

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-------LRELHLHGNSIGDEG 346
           LAEAL  N+T+ +L+L  N     GA  +A  L  NK+       L  L L  N I   G
Sbjct: 123 LAEALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQVG 182

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            R+L   L + +  L  L +  N I+A+G  ++ E ++N  +L ++N+   ++   G   
Sbjct: 183 ARSLADMLKANR-VLCGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTS 241

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           IA  L++N T+  + +  N + S+G  ++A  LK N V+  LDL  N I  DGA AL+E+
Sbjct: 242 IAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLKKLDLCENRIDLDGAVALAEI 301

Query: 467 LKFHGNINTLKL 478
            + +  +  +KL
Sbjct: 302 FRLNNGLTHVKL 313



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 158/320 (49%), Gaps = 6/320 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           G+   G  A    L+  + +++L+L  N IG  G   L   +  +  +  L L    +  
Sbjct: 2   GLGVEGGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGP 61

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
            G + ++  L+ N  +  L+++ N +   G  +LA  L  N  +++++ +GN     G  
Sbjct: 62  AGMRELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVA 121

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK------LAVLDIGNNSISAK 374
           ALA+ L  N ++  L+L  N I D G + + + L++ K        L  LD+G N I+  
Sbjct: 122 ALAEALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQV 181

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ +K  + L  + L  N I  EG   + ++L+ N  +T +++   N+   G ++
Sbjct: 182 GARSLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTS 241

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA +L+ N+ +  L +  N + + G ++L++ LK +  +  L L   +I   GA  +A++
Sbjct: 242 IAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLKKLDLCENRIDLDGAVALAEI 301

Query: 495 LRYNNTISILDLRANGLRDE 514
            R NN ++ + L  N L DE
Sbjct: 302 FRLNNGLTHVKLAGNALTDE 321



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+SG   G EG   LA  L  NQ  + V  + N +   G+ A    L++N  + TL
Sbjct: 77  VTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAALAEALRTNATVSTL 136

Query: 224 NLSGNPIGDEGVKCLCDILVDNAG--VERLQLSSVDL-----RDEGAKAIAELLKNNSIL 276
           NL  N I D G K +  IL +N    +  L L+ +DL        GA+++A++LK N +L
Sbjct: 137 NLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQVGARSLADMLKANRVL 196

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I   G   L E+L  N  +  L++        G  ++A  L  N +L EL 
Sbjct: 197 CGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTSIAALLRKNATLEELI 256

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +  N +  +G+++L  GL  R   L  LD+  N I   GA  +AE  +    L  + L  
Sbjct: 257 VKKNGLTSQGVQSLADGL-KRNLVLKKLDLCENRIDLDGAVALAEIFRLNNGLTHVKLAG 315

Query: 397 NDIGDEGAEKIADALKQNRTIT 418
           N + DEG   + +A  +N  +T
Sbjct: 316 NALTDEGVFALKEAATRNTKLT 337



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 149/331 (45%), Gaps = 63/331 (19%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +G EG  AL   L  R+  +  LD+ +N I   GA  +A+ I     L  ++L  N IG 
Sbjct: 3   LGVEGGVALGRALE-RRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGP 61

Query: 402 EGAEKIADALKQNRTITTIDL----------------------------GGNNIHSKGAS 433
            G  +++ AL+ N T+TT+D+                             GNN+ ++G +
Sbjct: 62  AGMRELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVA 121

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVL---KFHG----NINTLKLGWCQIGAS 486
           A+A  L+ N+ +++L+L  N I   GAK ++ +L   K H     N+  L LGW  I   
Sbjct: 122 ALAEALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQV 181

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDE----VCSGC---NGLSFFHSAIYSLKH----- 534
           GA  +ADML+ N  +  L L  N +  E    +C      + L+F + A  +L+      
Sbjct: 182 GARSLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTS 241

Query: 535 ---MLFYSLCINYL---------QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
              +L  +  +  L         QG + LA   K  N  L  +DL  N I  DGA A+A+
Sbjct: 242 IAALLRKNATLEELIVKKNGLTSQGVQSLADGLK-RNLVLKKLDLCENRIDLDGAVALAE 300

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             + N    +T + LA N LT  G  AL +A
Sbjct: 301 IFRLNN--GLTHVKLAGNALTDEGVFALKEA 329



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 8/290 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++ + G   G  G+  L+ +L  N T   +  + N +   G KA   +L +N  LK +
Sbjct: 49  LHTLSLKGNFIGPAGMRELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNV 108

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-------L 276
             SGN + +EGV  L + L  NA V  L L    + D GAK IA +L NN         L
Sbjct: 109 YASGNNLDNEGVAALAEALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNL 168

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L  N I   G  SLA+ L  N  +  L L GN   A G   L + LE N +L  L+
Sbjct: 169 THLDLGWNHITQVGARSLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFLN 228

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +   ++   G  + ++ L  +   L  L +  N ++++G   +A+ +K    L  ++L  
Sbjct: 229 IASCNLRKTGGTS-IAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLKKLDLCE 287

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           N I  +GA  +A+  + N  +T + L GN +  +G  A+      N+ +T
Sbjct: 288 NRIDLDGAVALAEIFRLNNGLTHVKLAGNALTDEGVFALKEAATRNTKLT 337



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 121/291 (41%), Gaps = 42/291 (14%)

Query: 96  GVFVSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNL-LSGFTGKLFRESKQTL 154
           G+F S       L    + P   R      EG N +V   T L +SG   +L  E  + L
Sbjct: 42  GIFASGHLHTLSLKGNFIGPAGMRELSSALEG-NLTV---TTLDVSG--NRLGVEGGKAL 95

Query: 155 NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
                  +   +V  SG N  +EG+  LAE+L  N T   ++   N I+ AG K    +L
Sbjct: 96  ASLLTANQHLKNVYASGNNLDNEGVAALAEALRTNATVSTLNLQLNRISDAGAKDIAAIL 155

Query: 215 QSNIA-----------------------------------LKTLNLSGNPIGDEGVKCLC 239
            +N A                                   L  L L GN I  EG   LC
Sbjct: 156 ANNKAHTLTGLNLTHLDLGWNHITQVGARSLADMLKANRVLCGLGLEGNRITAEGGMYLC 215

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           + L +N  +  L ++S +LR  G  +IA LL+ N+ L  L +  N +   G  SLA+ L 
Sbjct: 216 ESLENNHALTFLNIASCNLRKTGGTSIAALLRKNATLEELIVKKNGLTSQGVQSLADGLK 275

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            N  ++ L L  N     GA ALA+    N  L  + L GN++ DEG+ AL
Sbjct: 276 RNLVLKKLDLCENRIDLDGAVALAEIFRLNNGLTHVKLAGNALTDEGVFAL 326



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           ++  E    L E  +   A + ++++  N    G   +A  L  N T EE+    NG+T+
Sbjct: 205 RITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTSIAALLRKNATLEELIVKKNGLTS 264

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G+++    L+ N+ LK L+L  N I  +G   L +I   N G+  ++L+   L DEG  
Sbjct: 265 QGVQSLADGLKRNLVLKKLDLCENRIDLDGAVALAEIFRLNNGLTHVKLAGNALTDEGVF 324

Query: 265 AIAELLKNNSIL 276
           A+ E    N+ L
Sbjct: 325 ALKEAATRNTKL 336


>gi|320170755|gb|EFW47654.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 749

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 11/299 (3%)

Query: 202 ITAAGIKAFDGV-----LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
           +T +GI   D +     L+ N  L+ LNL  N IGD G + +   L +   +  L LS  
Sbjct: 24  LTYSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALRNKPALVALNLSQN 83

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            + D GA  IAE L+ +++L  L ++ N I   G T++  AL + + +  L +     G 
Sbjct: 84  KIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRDKAHLSVLRI-----GD 138

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           +GA A+A+GL  +  L +L +H N +GD G RA+ S L   K  L+VL +GNN IS  GA
Sbjct: 139 IGACAIAEGLRTSPGLTKLWMHANQVGDAGARAIGSALRD-KANLSVLHLGNNKISDIGA 197

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             +AE ++   +L  + ++ N IGD GA+ I  AL+    ++ + L  N I   GA AIA
Sbjct: 198 GAIAEGLQASTALNELGMHTNRIGDAGAQAIGSALRNKAYLSVLGLNNNKIGDTGACAIA 257

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
             L+ ++ +    +  N IG  GA+A+   L    +++ L L   QI +S  + ++  L
Sbjct: 258 EGLQASTALAEFGMDTNQIGDAGAQAIGSALCNKAHLSKLILSDNQISSSAVQLLSQNL 316



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 138/264 (52%), Gaps = 6/264 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           R+ L+   + D+ A  IA  L+ N+ L+ L L NN I   G  ++  AL     + +L+L
Sbjct: 21  RVILTYSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALRNKPALVALNL 80

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G  GA  +A+GL+ +  L EL++H N IGDEG  A+   L   K  L+VL IG+ 
Sbjct: 81  SQNKIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRD-KAHLSVLRIGD- 138

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
                GA  +AE ++    L  + ++ N +GD GA  I  AL+    ++ + LG N I  
Sbjct: 139 ----IGACAIAEGLRTSPGLTKLWMHANQVGDAGARAIGSALRDKANLSVLHLGNNKISD 194

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA AIA  L+ ++ +  L +  N IG  GA+A+   L+    ++ L L   +IG +GA 
Sbjct: 195 IGAGAIAEGLQASTALNELGMHTNRIGDAGAQAIGSALRNKAYLSVLGLNNNKIGDTGAC 254

Query: 490 FVADMLRYNNTISILDLRANGLRD 513
            +A+ L+ +  ++   +  N + D
Sbjct: 255 AIAEGLQASTALAEFGMDTNQIGD 278



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 137/299 (45%), Gaps = 41/299 (13%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  ++++S    GD G   +AE                             LQ++  L  
Sbjct: 74  ALVALNLSQNKIGDAGAVPIAEG----------------------------LQTSTVLNE 105

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+  N IGDEG   +   L D A      LS + + D GA AIAE L+ +  L  L ++
Sbjct: 106 LNMHTNQIGDEGATAIGCALRDKA-----HLSVLRIGDIGACAIAEGLRTSPGLTKLWMH 160

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N +  +G  ++  AL + + +  LHL  N    +GA A+A+GL+ + +L EL +H N I
Sbjct: 161 ANQVGDAGARAIGSALRDKANLSVLHLGNNKISDIGAGAIAEGLQASTALNELGMHTNRI 220

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A+ S L + K  L+VL + NN I   GA  +AE ++   +L    +  N IGD 
Sbjct: 221 GDAGAQAIGSALRN-KAYLSVLGLNNNKIGDTGACAIAEGLQASTALAEFGMDTNQIGDA 279

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-------DNSVITSLDLAYNP 454
           GA+ I  AL     ++ + L  N I S     +++ L        DN  I   D   +P
Sbjct: 280 GAQAIGSALCNKAHLSKLILSDNQISSSAVQLLSQNLPAKCEFSADNQRIRVQDANISP 338



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 45/304 (14%)

Query: 313 YGGALGANAL--AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           Y G    +AL  A GLE N +L+ L+L  N IGD G +A+ S L + K  L  L++  N 
Sbjct: 26  YSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALRN-KPALVALNLSQNK 84

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  +AE ++    L  +N++ N IGDEGA  I  AL+    ++ + +G       
Sbjct: 85  IGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRDKAHLSVLRIG-----DI 139

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  L+ +  +T L +  N +G  GA+A+   L+   N++ L LG  +I   GA  
Sbjct: 140 GACAIAEGLRTSPGLTKLWMHANQVGDAGARAIGSALRDKANLSVLHLGNNKISDIGAGA 199

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +A+ L+ +  ++ L +  N + D                                 GA+ 
Sbjct: 200 IAEGLQASTALNELGMHTNRIGDA--------------------------------GAQA 227

Query: 551 LAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
           +  + +  N+A L+ + L  N+I D GA AIA+ L+A+   A+    +  N +   G  A
Sbjct: 228 IGSALR--NKAYLSVLGLNNNKIGDTGACAIAEGLQAS--TALAEFGMDTNQIGDAGAQA 283

Query: 610 LTDA 613
           +  A
Sbjct: 284 IGSA 287



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 26/250 (10%)

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +  +S   + L  + I D+ A  IA+ L++N  +  ++L  N I   GA AI   L++  
Sbjct: 14  EKARSSTRVILTYSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALRNKP 73

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + +L+L+ N IG  GA  ++E L+    +N L +   QIG  GA  +   LR    +S+
Sbjct: 74  ALVALNLSQNKIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRDKAHLSV 133

Query: 504 LDLR-------ANGLR------------DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
           L +        A GLR            ++V  G  G     SA+    ++    L  N 
Sbjct: 134 LRIGDIGACAIAEGLRTSPGLTKLWMHANQV--GDAGARAIGSALRDKANLSVLHLGNNK 191

Query: 545 LQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
           +   GA  +A+  +  + AL  + +  N I D GA AI  AL+    ++V  LN  NN +
Sbjct: 192 ISDIGAGAIAEGLQ-ASTALNELGMHTNRIGDAGAQAIGSALRNKAYLSVLGLN--NNKI 248

Query: 603 TKFGQSALTD 612
              G  A+ +
Sbjct: 249 GDTGACAIAE 258


>gi|59891397|tpg|DAA05659.1| TPA_inf: caterpillar 16.2 [Mus musculus]
          Length = 1205

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           S+  L     +L    S+ +    F D  +  L   L G +    ++S A N I   G K
Sbjct: 652 SQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAK 711

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N +L TL+L  N IG  G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 712 ALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAE 771

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G  GA ALA+ L+ 
Sbjct: 772 ALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV 831

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N+ L  L L  NSI D G+  LM  L S           N ++S+               
Sbjct: 832 NQILENLDLQSNSISDMGVTVLMRALCS-----------NQTLSS--------------- 865

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              +NL  N IGDEGA  +A ALK N T+  + L GN++ + GA A+A  LK NS +  L
Sbjct: 866 ---LNLQENAIGDEGASSVAGALKVNTTLIALYLRGNDVGAAGAKALANALKLNSSLRRL 922

Query: 449 DLAYNPIGADG----AKALSE 465
           +L  N +G DG    A ALSE
Sbjct: 923 NLQENSLGMDGAIFVASALSE 943



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 1/249 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + ++    G++G   LA SL  N++   +   +N I   G KA    L+ N  L +L+L 
Sbjct: 698 ISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQ 757

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I D+GV C+ + LV N  +  LQL    +   GA+ +A+ LK N  L+ L  ++N I
Sbjct: 758 SNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTI 817

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  +LAEAL  N  + +L L  N    +G   L + L  N++L  L+L  N+IGDEG
Sbjct: 818 GDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLQENAIGDEG 877

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             ++   L      +A+   GN+ + A GA  +A  +K   SL  +NL  N +G +GA  
Sbjct: 878 ASSVAGALKVNTTLIALYLRGND-VGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIF 936

Query: 407 IADALKQNR 415
           +A AL +N 
Sbjct: 937 VASALSENH 945



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 140/303 (46%), Gaps = 36/303 (11%)

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           M   S  T+LA  LL+ S I S     ++   L  + L   L      + L L  N   D
Sbjct: 622 MTSPSHRTALAY-LLQMSDICSP--EADFSLCLSQHVLQSLLPQLLYCQSLRLDNNQFQD 678

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
             +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ ++L  N IG  GA
Sbjct: 679 PVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGA 738

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + +ADALK NRT+T++ L  N I   G   +A  L  N  I+ L L  N IG  GA+ ++
Sbjct: 739 KALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMA 798

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           + LK + ++  L      IG  GA  +A+ L+ N  +  LDL++N + D       G++ 
Sbjct: 799 DALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISD------MGVTV 852

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
              A+ S                           N+ L+S++L  N I D+GA ++A AL
Sbjct: 853 LMRALCS---------------------------NQTLSSLNLQENAIGDEGASSVAGAL 885

Query: 585 KAN 587
           K N
Sbjct: 886 KVN 888



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 100/198 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 749 RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 808

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L  S N IGD G   L + L  N  +E L L S  + D G   +   L +N  L  L L
Sbjct: 809 ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 868

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G +S+A AL  N+T+ +L+L GN  GA GA ALA  L+ N SLR L+L  NS
Sbjct: 869 QENAIGDEGASSVAGALKVNTTLIALYLRGNDVGAAGAKALANALKLNSSLRRLNLQENS 928

Query: 342 IGDEGIRALMSGLSSRKG 359
           +G +G   + S LS   G
Sbjct: 929 LGMDGAIFVASALSENHG 946


>gi|326434106|gb|EGD79676.1| hypothetical protein PTSG_10661 [Salpingoeca sp. ATCC 50818]
          Length = 1538

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 1/201 (0%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           LN    G +GA A+A+ L+ N  L+ L+LH NSIG EG  AL   L      L  L +G+
Sbjct: 43  LNNARLGVIGARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTA-LTWLSLGD 101

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           NSI  +GA  +AE +K+  +L W++LY N IGDEGA  +A+ L+ N T+ T+DL  N+I 
Sbjct: 102 NSIGGQGAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIG 161

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            +GA A+A +LK N+ +  L+L  N IG +GA AL++VLK +  +  L L    I   G 
Sbjct: 162 DEGAVALAEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEILNLTKNSITPVGG 221

Query: 489 EFVADMLRYNNTISILDLRAN 509
             +   L  N T+  L++  N
Sbjct: 222 AALGAALDQNRTLKKLNIERN 242



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 127/268 (47%), Gaps = 30/268 (11%)

Query: 187 GYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           G  +  EEV +  A      G+K     + +N     + L+   +G  G + + + L DN
Sbjct: 4   GEKRAREEVEALLAQTKLKDGVKNKIRAIANNTCGDNVGLNNARLGVIGARAVAEALKDN 63

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             ++RL L +  +  EGA A+AE+LK+N+ L  L L +N I   G   LAE L  N+ + 
Sbjct: 64  TCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNTALT 123

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L  N  G  GA ALA+ LE N +L  L L  NSIGDEG  AL               
Sbjct: 124 WLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVAL--------------- 168

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
                         AE +K+  +L  +NL+ N IGDEGA  +A  LK N T+  ++L  N
Sbjct: 169 --------------AEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEILNLTKN 214

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYN 453
           +I   G +A+   L  N  +  L++  N
Sbjct: 215 SITPVGGAALGAALDQNRTLKKLNIERN 242



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 112/221 (50%), Gaps = 3/221 (1%)

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G +A    L+ N  LK L L  N IG EG   L ++L  N  +  L L    +  +GA  
Sbjct: 52  GARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVV 111

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE+LK+N+ L  L L NN I   G  +LAE L  N+T+ +L L  N  G  GA ALA+ 
Sbjct: 112 LAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEM 171

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L +L+L  NSIGDEG  AL   L      L +L++  NSI+  G   +   +  
Sbjct: 172 LKHNTTLEKLNLWDNSIGDEGAVALAKVL-KHNTTLEILNLTKNSITPVGGAALGAALDQ 230

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
            ++L  +N+  N      A     AL  +R + T D  G++
Sbjct: 231 NRTLKKLNIERNSTA--TARAFGAALPVDRELITGDWFGDD 269



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 91/169 (53%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LAE L +N     +S   N I   G      +L+ N AL  L+L  N IGD
Sbjct: 75  SIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNTALTWLSLYNNSIGD 134

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EG   L ++L  N  +E L L    + DEGA A+AE+LK+N+ L  L L +N I   G  
Sbjct: 135 EGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWDNSIGDEGAV 194

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +LA+ L  N+T+  L+L  N    +G  AL   L+ N++L++L++  NS
Sbjct: 195 ALAKVLKHNTTLEILNLTKNSITPVGGAALGAALDQNRTLKKLNIERNS 243



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 88/149 (59%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + N  +   GA  VAE +K+   L  + L+ N IG EGA  +A+ LK N  +T + LG N
Sbjct: 43  LNNARLGVIGARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDN 102

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           +I  +GA  +A +LK N+ +T L L  N IG +GA AL+E+L+ +  + TL L    IG 
Sbjct: 103 SIGGQGAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGD 162

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDE 514
            GA  +A+ML++N T+  L+L  N + DE
Sbjct: 163 EGAVALAEMLKHNTTLEKLNLWDNSIGDE 191



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 104/196 (53%), Gaps = 1/196 (0%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +AE+L  N   + +    N I   G  A   +L+ N AL  L+L  N IG +G   L ++
Sbjct: 56  VAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVVLAEM 115

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  L L +  + DEGA A+AE+L++N+ L  L+L +N I   G  +LAE L  N
Sbjct: 116 LKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHN 175

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L+L  N  G  GA ALAK L+ N +L  L+L  NSI   G  AL + L   +  L
Sbjct: 176 TTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEILNLTKNSITPVGGAALGAALDQNR-TL 234

Query: 362 AVLDIGNNSISAKGAF 377
             L+I  NS +   AF
Sbjct: 235 KKLNIERNSTATARAF 250



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 6/192 (3%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K   A + + +   + G +G   LAE L +N     +S   N I   G  A   +
Sbjct: 84  LAEMLKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEM 143

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L+TL+L  N IGDEG   L ++L  N  +E+L L    + DEGA A+A++LK+N
Sbjct: 144 LEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLKHN 203

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L +L L  N I   G  +L  AL +N T++ L++  N      A A    L  ++ L 
Sbjct: 204 TTLEILNLTKNSITPVGGAALGAALDQNRTLKKLNIERNSTAT--ARAFGAALPVDREL- 260

Query: 334 ELHLHGNSIGDE 345
              + G+  GD+
Sbjct: 261 ---ITGDWFGDD 269



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 99/185 (53%), Gaps = 7/185 (3%)

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A+A  LKDN+ +  L L  N IG +GA AL+E+LK +  +  L LG   IG  GA  
Sbjct: 52  GARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVV 111

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +A+ML++N  ++ L L  N + DE   G   L+       +L+ +  +   I   +GA  
Sbjct: 112 LAEMLKHNTALTWLSLYNNSIGDE---GAVALAEMLEHNTTLETLDLWDNSIGD-EGAVA 167

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           LA+  K  N  L  ++L  N I D+GA A+A+ LK N  + +  LNL  N +T  G +AL
Sbjct: 168 LAEMLK-HNTTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEI--LNLTKNSITPVGGAAL 224

Query: 611 TDAKD 615
             A D
Sbjct: 225 GAALD 229



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 53/115 (46%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS +   +  E    L E  +      ++D+   + GDEG   LAE L +N T E+++  
Sbjct: 125 LSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLW 184

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            N I   G  A   VL+ N  L+ LNL+ N I   G   L   L  N  +++L +
Sbjct: 185 DNSIGDEGAVALAKVLKHNTTLEILNLTKNSITPVGGAALGAALDQNRTLKKLNI 239


>gi|320165772|gb|EFW42671.1| hypothetical protein CAOG_07803 [Capsaspora owczarzaki ATCC 30864]
          Length = 664

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 143/283 (50%), Gaps = 36/283 (12%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L    IGDE  +A+   L   K  L  LD+ NN I   GA   AE +K  K+L  I L
Sbjct: 25  LSLERRQIGDEEAKAIAEALKVNK-TLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRL 83

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N IG+ GA+ IA ALK N T+ T+ LG N +   GA AIA  L+ N+ +  L L  N 
Sbjct: 84  WANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQ 143

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A++E LK +  + TL L   QIG  GA+ +A+ L+ N T++ L L  N + D 
Sbjct: 144 IGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDV 203

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                           GA+ +A++ + VN  +T ++L  N I D
Sbjct: 204 --------------------------------GAQAIAEALE-VNTTVTHLELDQNHIGD 230

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
            GA  IA ALK N+   +T L L+ NFLT  G +AL    +++
Sbjct: 231 VGANTIAAALKVNK--TLTLLYLSQNFLTNTGINALRQTGNII 271



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 137/294 (46%), Gaps = 33/294 (11%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  R  GDE    +AE+L  N+T   +    N I   G  AF   L+ N AL  + L  N
Sbjct: 27  LERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLWAN 86

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+ G + +   L  N  +  L L    L D GA+AIAE L+ N+ L  L L  N I  
Sbjct: 87  QIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGD 146

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AEAL  N T+ +L L  N  G +GA A+A+ L+ NK+L EL L  N IGD G +
Sbjct: 147 VGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDVGAQ 206

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A                             +AE ++   ++  + L  N IGD GA  IA
Sbjct: 207 A-----------------------------IAEALEVNTTVTHLELDQNHIGDVGANTIA 237

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIAR----VLKDNSVITSLDLAYNPIGAD 458
            ALK N+T+T + L  N + + G +A+ +    +   NS    LD    P  AD
Sbjct: 238 AALKVNKTLTLLYLSQNFLTNTGINALRQTGNIICTFNSARGRLDQQRTPSPAD 291



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 117/240 (48%), Gaps = 8/240 (3%)

Query: 143 TGKLFRESKQTLNEFAKEL-------RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           +G L  E +Q  +E AK +       +  + +D+     GD G    AE+L  N+   E+
Sbjct: 22  SGGLSLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEI 81

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
              AN I   G +A    L++N  L TL L  N +GD G + + + L  N  + +L L  
Sbjct: 82  RLWANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRE 141

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+AIAE LK N  L  L L  N I   G  ++AEAL  N T+  L L  N  G
Sbjct: 142 NQIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIG 201

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            +GA A+A+ LE N ++  L L  N IGD G   + + L   K  L +L +  N ++  G
Sbjct: 202 DVGAQAIAEALEVNTTVTHLELDQNHIGDVGANTIAAALKVNK-TLTLLYLSQNFLTNTG 260


>gi|320164804|gb|EFW41703.1| hypothetical protein CAOG_06835 [Capsaspora owczarzaki ATCC 30864]
          Length = 1217

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 137/239 (57%), Gaps = 6/239 (2%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS   IGD   + + + L  N  + +L L S  + D GAKAIAE LK N+ L  L L+
Sbjct: 26  LLLSWCKIGDVEAQAIAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLS 85

Query: 283 -----NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
                NN I   G  +LAEAL  N+T+  L L+GN  G +GA A+A+ LE N +L +L L
Sbjct: 86  TIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLIL 145

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N +GD G  ++   L  +   L  L + +N I   GA  ++E ++   +L  +NL++N
Sbjct: 146 SDNQVGDAGALSISKAL-QKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWLN 204

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            IGD GA  +++AL++N T+  ++L  N I + GA +I+  L+ N+ + +L+L +N IG
Sbjct: 205 QIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLNLEFNQIG 263



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 139/247 (56%), Gaps = 7/247 (2%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V NA  E L LS   + D  A+AIAE L+ N+ L  L L +  I  +G  ++AEAL  N+
Sbjct: 19  VKNASGELL-LSWCKIGDVEAQAIAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNT 77

Query: 303 TIRSLHLN-----GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           T+  LHL+      N  G +GA ALA+ LE N +L +L LHGN IG+ G +A+   L   
Sbjct: 78  TLTQLHLSTIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEV- 136

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L  L + +N +   GA  +++ ++    L  ++L  N IGD GA  I++AL++N T+
Sbjct: 137 NTTLTKLILSDNQVGDAGALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTL 196

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             ++L  N I   GA +++  L+ N+ + +L+L  N IG  GA ++SE L+ +  +  L 
Sbjct: 197 QILNLWLNQIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLN 256

Query: 478 LGWCQIG 484
           L + QIG
Sbjct: 257 LEFNQIG 263



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 34/264 (12%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD     +AE+L  N T                            L  LNL   
Sbjct: 28  LSWCKIGDVEAQAIAEALEVNTT----------------------------LIKLNLLSG 59

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNN 283
            IGD G K + + L  N  + +L LS++ L      D GA+A+AE L+ N+ L  L+L+ 
Sbjct: 60  QIGDAGAKAIAEALKVNTTLTQLHLSTIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHG 119

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++AEAL  N+T+  L L+ N  G  GA +++K L+ N  L+ L L  N IG
Sbjct: 120 NQIGEVGAQAIAEALEVNTTLTKLILSDNQVGDAGALSISKALQKNTILQNLSLASNQIG 179

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G  ++   L  +   L +L++  N I   GA  ++E ++   +L  +NL++N IG+ G
Sbjct: 180 DAGALSISEAL-QKNTTLQILNLWLNQIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAG 238

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  I++AL++N T+  ++L  N I
Sbjct: 239 ALSISEALQKNTTLQNLNLEFNQI 262



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 117/201 (58%), Gaps = 4/201 (1%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL----SSRKGKLAVLDIGNNS 370
           G + A A+A+ LE N +L +L+L    IGD G +A+   L    +  +  L+ + + NN 
Sbjct: 34  GDVEAQAIAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLSTIQLFNNQ 93

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  +AE ++   +L  ++L+ N IG+ GA+ IA+AL+ N T+T + L  N +   
Sbjct: 94  IGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLILSDNQVGDA 153

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA +I++ L+ N+++ +L LA N IG  GA ++SE L+ +  +  L L   QIG +GA  
Sbjct: 154 GALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWLNQIGDAGALS 213

Query: 491 VADMLRYNNTISILDLRANGL 511
           +++ L+ N T+  L+L  N +
Sbjct: 214 LSEALQKNTTLQNLNLWLNQI 234



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 99/180 (55%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++ +     GD G   LAE+L  N T  ++    N I   G +A    L+ N  L  L
Sbjct: 84  LSTIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKL 143

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            LS N +GD G   +   L  N  ++ L L+S  + D GA +I+E L+ N+ L++L L  
Sbjct: 144 ILSDNQVGDAGALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWL 203

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  SL+EAL +N+T+++L+L  N  G  GA ++++ L+ N +L+ L+L  N IG
Sbjct: 204 NQIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLNLEFNQIG 263



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 1/223 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E  +     + +D+ G   G+ G   +AE+L  N T  ++  + N +  AG  +  
Sbjct: 100 QALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLILSDNQVGDAGALSIS 159

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             LQ N  L+ L+L+ N IGD G   + + L  N  ++ L L    + D GA +++E L+
Sbjct: 160 KALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWLNQIGDAGALSLSEALQ 219

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L+ L L  N I  +G  S++EAL +N+T+++L+L  N  G +    L   + G+ S
Sbjct: 220 KNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLNLEFNQIGYVEETVLRHIVLGDPS 279

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           + +  L    I D  +R   S + S       +DI    + AK
Sbjct: 280 VGKTSL-VRGIADGYVRQAFSNMFSIANSTDGIDISTVILRAK 321


>gi|66815309|ref|XP_641671.1| hypothetical protein DDB_G0279513 [Dictyostelium discoideum AX4]
 gi|60469707|gb|EAL67695.1| hypothetical protein DDB_G0279513 [Dictyostelium discoideum AX4]
          Length = 617

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 180/365 (49%), Gaps = 45/365 (12%)

Query: 253 LSSVDLRDEGAK-----AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           L+++DLR+  +       +AE LK+N  L  L L NN +   G TS+A A+ +N +I  L
Sbjct: 105 LTTIDLRNNSSTNYVIDRLAEALKSNKTLTYLNLYNNRLMQKGGTSIANAMKKNQSITHL 164

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  GA G NA+A  L+ N +L  L L  N +G                        
Sbjct: 165 DLGLNLLGANGGNAIADALKVNNTLVHLDLSSNQLG------------------------ 200

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
                 +GA  V E +K  KS+ ++ L  N + DE +  +AD L+ N     + L  N I
Sbjct: 201 -----LRGAGPVVEALKINKSIKYLILNSNQLRDECSLPLADILRSNIGFIELALNDNEI 255

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            SKG  A+A++LK + V+T L+   N +G DG  A+++VLK + NI  ++L W ++G   
Sbjct: 256 GSKGGIALAKMLKSSKVLTKLEFGKNELGDDGGLAMADVLKNNKNIKVVRLNWNKLGVKA 315

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL--CINYL 545
            + +++  + N+TI  LDL  N   DE      GL     +    K +L   L    + L
Sbjct: 316 IKALSESFKTNSTIIQLDLSFNNFGDE------GLVCLSESFKQNKSILSLDLSRVASGL 369

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
            G K LA S + VN  + ++DL   +I ++G   +A++L  N+  ++++L L NN  +K 
Sbjct: 370 VGHKALADSLR-VNNTIQTLDLTNCKITNEGGVELAKSLVDNK--SISTLILNNNTFSKD 426

Query: 606 GQSAL 610
             S L
Sbjct: 427 TVSEL 431



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 242/527 (45%), Gaps = 54/527 (10%)

Query: 98  FVSATFVLWKLVEKLLMPK--------PSRPSKPTAE----GMNWSVGAGTNLLSGFTGK 145
           FV+ T V  KL    ++P          S+P++P  E    G+     + T+    F   
Sbjct: 30  FVNYTLV-CKLWTTQILPTAWNEMTIATSQPAEPLIEYSEDGILSQFPSTTSEPYKFNKL 88

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           + R  K  ++E+  ++++ +++D+   +  +  +  LAE+L  N+T   ++   N +   
Sbjct: 89  VMRVGK--VSEYIDKIKSLTTIDLRNNSSTNYVIDRLAEALKSNKTLTYLNLYNNRLMQK 146

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G  +    ++ N ++  L+L  N +G  G   + D L  N  +  L LSS  L   GA  
Sbjct: 147 GGTSIANAMKKNQSITHLDLGLNLLGANGGNAIADALKVNNTLVHLDLSSNQLGLRGAGP 206

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + E LK N  ++ L LN+N +       LA+ L  N     L LN N  G+ G  ALAK 
Sbjct: 207 VVEALKINKSIKYLILNSNQLRDECSLPLADILRSNIGFIELALNDNEIGSKGGIALAKM 266

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ +K L +L    N +GD+G      GL+                       +A+ +KN
Sbjct: 267 LKSSKVLTKLEFGKNELGDDG------GLA-----------------------MADVLKN 297

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            K++  + L  N +G +  + ++++ K N TI  +DL  NN   +G   ++   K N  I
Sbjct: 298 NKNIKVVRLNWNKLGVKAIKALSESFKTNSTIIQLDLSFNNFGDEGLVCLSESFKQNKSI 357

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            SLDL+    G  G KAL++ L+ +  I TL L  C+I   G   +A  L  N +IS L 
Sbjct: 358 LSLDLSRVASGLVGHKALADSLRVNNTIQTLDLTNCKITNEGGVELAKSLVDNKSISTLI 417

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTS 564
           L  N    +  S        +S I SL  ++   L I+   G + L +S     N++L +
Sbjct: 418 LNNNTFSKDTVSELAKTLESNSTITSL-SLVHNQLTID---GVEDLFKSLSTSTNKSLQT 473

Query: 565 IDLAFNEIRDDGAFAIAQAL-KANEDVAVTSLNLANNFLTKFGQSAL 610
           +DL  N +  DG   IAQ L K+N    ++ L L NN L+  G S++
Sbjct: 474 LDLTNNLLGSDGGNIIAQHLTKSN----LSELILTNNQLSSQGASSI 516



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 171/356 (48%), Gaps = 8/356 (2%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L +  K  +  + ++      GD+G   +A+ L  N+  + V    N +    IKA    
Sbjct: 263 LAKMLKSSKVLTKLEFGKNELGDDGGLAMADVLKNNKNIKVVRLNWNKLGVKAIKALSES 322

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            ++N  +  L+LS N  GDEG+ CL +    N  +  L LS V     G KA+A+ L+ N
Sbjct: 323 FKTNSTIIQLDLSFNNFGDEGLVCLSESFKQNKSILSLDLSRVASGLVGHKALADSLRVN 382

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + ++ L+L N  I   G   LA++L++N +I +L LN N       + LAK LE N ++ 
Sbjct: 383 NTIQTLDLTNCKITNEGGVELAKSLVDNKSISTLILNNNTFSKDTVSELAKTLESNSTIT 442

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYI--KNCKSLL 390
            L L  N +  +G+  L   LS+   K L  LD+ NN + + G   +A+++   N   L+
Sbjct: 443 SLSLVHNQLTIDGVEDLFKSLSTSTNKSLQTLDLTNNLLGSDGGNIIAQHLTKSNLSELI 502

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             N   N +  +GA  I + L Q+  + T+D+  N+I    A+++   +  NS I  L++
Sbjct: 503 LTN---NQLSSQGASSILNVLPQSN-LQTLDISNNSIEPDVATSLCSAIS-NSQILKLNI 557

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           + N +       L + ++ + ++ ++++   Q        +   ++ N +I   DL
Sbjct: 558 STNKLDDTVIPPLIQAIQTNQSLISIQISANQFSKESNNKLLYSIQQNKSIYYYDL 613


>gi|320164729|gb|EFW41628.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 255

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 142/254 (55%), Gaps = 6/254 (2%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L   ++ D GA+AIAE LK N+ +  L L  N I  +G  ++AE L  N+T+  L L  N
Sbjct: 5   LPEEEIGDAGARAIAEALKVNATVTTLALGKNQIGDAGARTIAETLKVNTTLTQLFLQRN 64

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                G NA+A+ L+ N S+  L L  N IGD G RA+   L +    L  L++  N I 
Sbjct: 65  QIREGGMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANT-TLTWLNLCQNQIG 123

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDI--GDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
              A  +AE +K   +L    LY+ DI  G+ GA+ IA+ALK N T+TT+DL  N I   
Sbjct: 124 DAAAQAIAEALKVNTTL--TKLYLLDIQIGEAGAKAIAEALKVNATVTTLDLDKNQIGDA 181

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  LK N+ +T L L  N IG  GA+A++E LK +  +  L L   +IG  GA+ 
Sbjct: 182 GAQAIAEALKVNTTVTRLYLWLNLIGDAGAQAIAEALKVNTTLTVLNLS-KKIGDIGAQA 240

Query: 491 VADMLRYNNTISIL 504
           +A+ L+ N T++ L
Sbjct: 241 IAEALKVNTTLTWL 254



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 119/217 (54%), Gaps = 9/217 (4%)

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +IGD GA  IA+ALK N T+TT+ LG N I   GA  IA  LK N+ +T L L  N I  
Sbjct: 9   EIGDAGARAIAEALKVNATVTTLALGKNQIGDAGARTIAETLKVNTTLTQLFLQRNQIRE 68

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            G  A++E LK + ++  L LG  QIG +GA  +A+ LR N T++ L+L  N + D    
Sbjct: 69  GGMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANTTLTWLNLCQNQIGDAAAQ 128

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQ-GAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
                   ++ +  L     Y L I   + GAK +A++ K VN  +T++DL  N+I D G
Sbjct: 129 AIAEALKVNTTLTKL-----YLLDIQIGEAGAKAIAEALK-VNATVTTLDLDKNQIGDAG 182

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           A AIA+ALK N    VT L L  N +   G  A+ +A
Sbjct: 183 AQAIAEALKVN--TTVTRLYLWLNLIGDAGAQAIAEA 217



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/286 (36%), Positives = 142/286 (49%), Gaps = 34/286 (11%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E S     I  AG +A    L+ N  + TL L  N IG                      
Sbjct: 2   EDSLPEEEIGDAGARAIAEALKVNATVTTLALGKNQIG---------------------- 39

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
                 D GA+ IAE LK N+ L  L L  N I   G  ++AEAL  N+++ +L L  N 
Sbjct: 40  ------DAGARTIAETLKVNTTLTQLFLQRNQIREGGMNAIAEALKVNASVTALGLGDNQ 93

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL--SSRKGKLAVLDIGNNSI 371
            G  GA A+A+ L  N +L  L+L  N IGD   +A+   L  ++   KL +LDI    I
Sbjct: 94  IGDAGARAIAETLRANTTLTWLNLCQNQIGDAAAQAIAEALKVNTTLTKLYLLDI---QI 150

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              GA  +AE +K   ++  ++L  N IGD GA+ IA+ALK N T+T + L  N I   G
Sbjct: 151 GEAGAKAIAEALKVNATVTTLDLDKNQIGDAGAQAIAEALKVNTTVTRLYLWLNLIGDAG 210

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           A AIA  LK N+ +T L+L+   IG  GA+A++E LK +  +  LK
Sbjct: 211 AQAIAEALKVNTTLTVLNLS-KKIGDIGAQAIAEALKVNTTLTWLK 255



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 137/256 (53%), Gaps = 11/256 (4%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E  L    IGD G RA+   L      +  L +G N I   GA  +AE +K   +L  + 
Sbjct: 2   EDSLPEEEIGDAGARAIAEALKVN-ATVTTLALGKNQIGDAGARTIAETLKVNTTLTQLF 60

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N I + G   IA+ALK N ++T + LG N I   GA AIA  L+ N+ +T L+L  N
Sbjct: 61  LQRNQIREGGMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANTTLTWLNLCQN 120

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG   A+A++E LK +  +  L L   QIG +GA+ +A+ L+ N T++ LDL  N + D
Sbjct: 121 QIGDAAAQAIAEALKVNTTLTKLYLLDIQIGEAGAKAIAEALKVNATVTTLDLDKNQIGD 180

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
              +G   ++       ++  +  +   +N +   GA+ +A++ K VN  LT ++L+  +
Sbjct: 181 ---AGAQAIAEALKVNTTVTRLYLW---LNLIGDAGAQAIAEALK-VNTTLTVLNLS-KK 232

Query: 572 IRDDGAFAIAQALKAN 587
           I D GA AIA+ALK N
Sbjct: 233 IGDIGAQAIAEALKVN 248



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 133/275 (48%), Gaps = 30/275 (10%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N T   ++   N I  AG +     L+ N  L  L L  N I + 
Sbjct: 10  IGDAGARAIAEALKVNATVTTLALGKNQIGDAGARTIAETLKVNTTLTQLFLQRNQIREG 69

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G+  + + L  NA V  L L    + D GA+AIAE L+ N+ L  L L  N I  +   +
Sbjct: 70  GMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANTTLTWLNLCQNQIGDAAAQA 129

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T+  L+L     G  GA A+A+ L+ N ++  L L  N IGD G +A    
Sbjct: 130 IAEALKVNTTLTKLYLLDIQIGEAGAKAIAEALKVNATVTTLDLDKNQIGDAGAQA---- 185

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                    +AE +K   ++  + L++N IGD GA+ IA+ALK 
Sbjct: 186 -------------------------IAEALKVNTTVTRLYLWLNLIGDAGAQAIAEALKV 220

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           N T+T ++L    I   GA AIA  LK N+ +T L
Sbjct: 221 NTTLTVLNL-SKKIGDIGAQAIAEALKVNTTLTWL 254



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 122/249 (48%), Gaps = 31/249 (12%)

Query: 171 GRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           G+N  GD G   +AE+L  N T  ++    N I   G+ A    L+ N ++  L L  N 
Sbjct: 34  GKNQIGDAGARTIAETLKVNTTLTQLFLQRNQIREGGMNAIAEALKVNASVTALGLGDNQ 93

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IGD G + + + L  N  +  L L    + D  A+AIAE LK N+ L  L L +  I  +
Sbjct: 94  IGDAGARAIAETLRANTTLTWLNLCQNQIGDAAAQAIAEALKVNTTLTKLYLLDIQIGEA 153

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+T+ +L L+ N  G  GA A+A+ L+ N ++  L+L  N IGD G +A
Sbjct: 154 GAKAIAEALKVNATVTTLDLDKNQIGDAGAQAIAEALKVNTTVTRLYLWLNLIGDAGAQA 213

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
                                        +AE +K   +L  +NL    IGD GA+ IA+
Sbjct: 214 -----------------------------IAEALKVNTTLTVLNLS-KKIGDIGAQAIAE 243

Query: 410 ALKQNRTIT 418
           ALK N T+T
Sbjct: 244 ALKVNTTLT 252



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G+ G   +AE+L  N T   +    N I  AG +A    L+ N  +  L L  N IGD 
Sbjct: 150 IGEAGAKAIAEALKVNATVTTLDLDKNQIGDAGAQAIAEALKVNTTVTRLYLWLNLIGDA 209

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           G + + + L  N  +  L LS   + D GA+AIAE LK N+ L  L+
Sbjct: 210 GAQAIAEALKVNTTLTVLNLSK-KIGDIGAQAIAEALKVNTTLTWLK 255


>gi|189502739|ref|YP_001958456.1| hypothetical protein Aasi_1436 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498180|gb|ACE06727.1| hypothetical protein Aasi_1436 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 815

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 213/418 (50%), Gaps = 32/418 (7%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+S    G +G   LA+ L   Q    V  + NGI A G   F   LQ    + T+
Sbjct: 403 IQSIDLSENEIGAQGAVKLAKYLQDTQV-HTVYLSFNGIGAQGAVEFTKNLQGT-RVHTV 460

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR--DEGAKAIAELLKN--NSILRVL 279
           +LS N IG +GV+ L   L      +  ++ +V+LR    GA+ + EL KN   + +  +
Sbjct: 461 DLSWNRIGAQGVEELIKHL------QATKVHTVNLRLNQIGAQGVEELAKNLQGTSVHTV 514

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ N I   G   L    L+ + + +++L+ N  GA GA  LAK L G  S+  + L G
Sbjct: 515 NLSENHIGDQGAEELFR-YLQGTRVHTVYLSSNQIGAQGAERLAKQLLGT-SVHTIDLSG 572

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK--SLLWINLYMN 397
           N IGD G       L  ++  +  +D+  N I  +GA    E+ KN +  S+  + L  N
Sbjct: 573 NHIGDRGAEGFAQHL--QRTSVHTVDLSENHIGDRGAI---EFAKNLQGTSVHTVYLNHN 627

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG +GA ++A  L Q  ++  I+L  N I ++GA  +A+ L+   V T ++L  N IGA
Sbjct: 628 KIGAQGAIELAKHL-QGSSVQKINLSHNQIGAQGAEGLAKHLQGTQVHT-INLWANQIGA 685

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            GA   ++ L+   N++T+ LG+ QIGA GAE +A  L+   ++  +DL +N + D+   
Sbjct: 686 QGAVEFAKNLQG-TNVHTVYLGYNQIGAQGAEGLAKNLQ-GTSVHTVDLTSNQIGDQ--- 740

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
           G  GL+ +     +  H +  S      QGA+ LA+S +    ++ ++DL +N+I  D
Sbjct: 741 GAEGLAKYLQG--TQVHTVNLSSNNIGAQGAEELAKSLQ--GTSVHTVDLRWNDIGAD 794



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 164/316 (51%), Gaps = 13/316 (4%)

Query: 152 QTLNEFAKELRAFS--SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           Q + E AK L+  S  +V++S  + GD+G   L   L        V  ++N I A G + 
Sbjct: 497 QGVEELAKNLQGTSVHTVNLSENHIGDQGAEELFRYL-QGTRVHTVYLSSNQIGAQGAER 555

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L    ++ T++LSGN IGD G +     L     V  + LS   + D GA   A+ 
Sbjct: 556 LAKQL-LGTSVHTIDLSGNHIGDRGAEGFAQHL-QRTSVHTVDLSENHIGDRGAIEFAKN 613

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L+  S+  V  LN+N I   G   LA+ L + S+++ ++L+ N  GA GA  LAK L+G 
Sbjct: 614 LQGTSVHTVY-LNHNKIGAQGAIELAKHL-QGSSVQKINLSHNQIGAQGAEGLAKHLQGT 671

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           + +  ++L  N IG +G       L      +  + +G N I A+GA  +A+ ++   S+
Sbjct: 672 Q-VHTINLWANQIGAQGAVEFAKNLQGT--NVHTVYLGYNQIGAQGAEGLAKNLQGT-SV 727

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L  N IGD+GAE +A  L Q   + T++L  NNI ++GA  +A+ L+  SV T +D
Sbjct: 728 HTVDLTSNQIGDQGAEGLAKYL-QGTQVHTVNLSSNNIGAQGAEELAKSLQGTSVHT-VD 785

Query: 450 LAYNPIGADGAKALSE 465
           L +N IGAD  + L E
Sbjct: 786 LRWNDIGADIQRLLVE 801



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 195/384 (50%), Gaps = 27/384 (7%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV- 278
           +++++LS N IG +G   L   L D   V  + LS   +   GA+   E  KN    RV 
Sbjct: 403 IQSIDLSENEIGAQGAVKLAKYLQDTQ-VHTVYLSFNGI---GAQGAVEFTKNLQGTRVH 458

Query: 279 -LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            ++L+ N I   G   L + L + + + +++L  N  GA G   LAK L+G  S+  ++L
Sbjct: 459 TVDLSWNRIGAQGVEELIKHL-QATKVHTVNLRLNQIGAQGVEELAKNLQGT-SVHTVNL 516

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N IGD+G   L   L   +  +  + + +N I A+GA  +A+ +    S+  I+L  N
Sbjct: 517 SENHIGDQGAEELFRYLQGTR--VHTVYLSSNQIGAQGAERLAKQLLGT-SVHTIDLSGN 573

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IGD GAE  A  L Q  ++ T+DL  N+I  +GA   A+ L+  SV T + L +N IGA
Sbjct: 574 HIGDRGAEGFAQHL-QRTSVHTVDLSENHIGDRGAIEFAKNLQGTSVHT-VYLNHNKIGA 631

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            GA  L++ L+   ++  + L   QIGA GAE +A  L+    +  ++L AN +      
Sbjct: 632 QGAIELAKHLQG-SSVQKINLSHNQIGAQGAEGLAKHLQ-GTQVHTINLWANQI------ 683

Query: 518 GCNGLSFFHSAIYSLK-HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
           G  G   F   +     H ++        QGA+ LA++ +    ++ ++DL  N+I D G
Sbjct: 684 GAQGAVEFAKNLQGTNVHTVYLGYNQIGAQGAEGLAKNLQ--GTSVHTVDLTSNQIGDQG 741

Query: 577 AFAIAQALKANEDVAVTSLNLANN 600
           A  +A+ L+  +   V ++NL++N
Sbjct: 742 AEGLAKYLQGTQ---VHTVNLSSN 762



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 44/257 (17%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           K+  +D+  N I A+GA  +A+Y+++ + +  + L  N IG +GA +    L+  R + T
Sbjct: 402 KIQSIDLSENEIGAQGAVKLAKYLQDTQ-VHTVYLSFNGIGAQGAVEFTKNLQGTR-VHT 459

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL  N I ++G   + + L+   V T ++L  N IGA G + L++ L+   +++T+ L 
Sbjct: 460 VDLSWNRIGAQGVEELIKHLQATKVHT-VNLRLNQIGAQGVEELAKNLQG-TSVHTVNLS 517

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
              IG  GAE   ++ RY     +                              H ++ S
Sbjct: 518 ENHIGDQGAE---ELFRYLQGTRV------------------------------HTVYLS 544

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                 QGA+ LA+  +++  ++ +IDL+ N I D GA   AQ L   +  +V +++L+ 
Sbjct: 545 SNQIGAQGAERLAK--QLLGTSVHTIDLSGNHIGDRGAEGFAQHL---QRTSVHTVDLSE 599

Query: 600 NFLTKFGQSALTDAKDL 616
           N +   G  A+  AK+L
Sbjct: 600 NHIGDRG--AIEFAKNL 614


>gi|290987507|ref|XP_002676464.1| predicted protein [Naegleria gruberi]
 gi|284090066|gb|EFC43720.1| predicted protein [Naegleria gruberi]
          Length = 631

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 207/403 (51%), Gaps = 23/403 (5%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++Q N +    +L  + +GDE  K L  IL  N     + L    LRD G   +A L
Sbjct: 66  FVDLIQKNCSGLLFSLKEHGLGDEAAKSLTKILSKNNTYTIVDLCGNRLRDTGCIELAPL 125

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG------NYGGALGANALA 323
           L+NN+ +  L+L +N +   G  +L  ALL N T+ SL L+G      N+    GA  L+
Sbjct: 126 LENNTSIVRLDLRSNDVGGKGAKALFNALLFNQTLTSLDLSGLSGINRNHISTKGAKHLS 185

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L+ N++L +L+L  N +G +GIR L  GL      L  LDI +N+I + G   +A+ +
Sbjct: 186 ELLQQNQTLCQLNLASNGMGSDGIRILCRGLVDN-FSLTELDISSNNIGSAGCEFLAKVL 244

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKD 441
            +  +L  + +  N IGD+G   + D +K     T+T  DL  N I  +G  +I  +LK 
Sbjct: 245 -DSTNLQKLIMERNQIGDKGVSIMCDKMKNMLTPTLTYWDLTENKISHEGVLSICEMLKI 303

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           +  + +L +  N  G  GA+  +++L+ +  +  L LG   IG  GA+ +  ++  N T+
Sbjct: 304 DKCLKTLKIECNEFGDKGAEEFAQLLEINKTLKKLFLGENAIGDEGAKEIGKVMALNKTL 363

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV--N 559
             L L  N ++D   SG   +    +    LKH+    L  N + G +   +  +V+  N
Sbjct: 364 KTLFLNNNLIKD---SGTKRIMIGLTDGTKLKHL---DLSFNRI-GDRAGVEIARVLATN 416

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA-NNF 601
            +L +++L  NE+++ G   IA+A++ N   ++TS++ + N+F
Sbjct: 417 RSLKTLNLKQNELKESGE-QIAEAMRKN--FSLTSMDFSFNDF 456



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 199/428 (46%), Gaps = 42/428 (9%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GDE    L + L  N T   V    N +   G      +L++N ++  L+L  N +G +
Sbjct: 86  LGDEAAKSLTKILSKNNTYTIVDLCGNRLRDTGCIELAPLLENNTSIVRLDLRSNDVGGK 145

Query: 234 GVKCLCDILVDNAGVERLQLSSVD------LRDEGAKAIAELLKNNSILRVLELNNNMID 287
           G K L + L+ N  +  L LS +       +  +GAK ++ELL+ N  L  L L +N + 
Sbjct: 146 GAKALFNALLFNQTLTSLDLSGLSGINRNHISTKGAKHLSELLQQNQTLCQLNLASNGMG 205

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
             G   L   L++N ++  L ++ N  G+ G   LAK L+   +L++L +  N IGD+G+
Sbjct: 206 SDGIRILCRGLVDNFSLTELDISSNNIGSAGCEFLAKVLDST-NLQKLIMERNQIGDKGV 264

Query: 348 RALMSGLSSR-KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             +   + +     L   D+  N IS +G   + E +K  K L  + +  N+ GD+GAE+
Sbjct: 265 SIMCDKMKNMLTPTLTYWDLTENKISHEGVLSICEMLKIDKCLKTLKIECNEFGDKGAEE 324

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
            A  L+ N+T+  + LG N I  +GA  I +V+  N  + +L L  N I   G K +   
Sbjct: 325 FAQLLEINKTLKKLFLGENAIGDEGAKEIGKVMALNKTLKTLFLNNNLIKDSGTKRIMIG 384

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           L     +  L L + +IG      +A +L  N ++  L+L+ N L++   SG        
Sbjct: 385 LTDGTKLKHLDLSFNRIGDRAGVEIARVLATNRSLKTLNLKQNELKE---SG-------- 433

Query: 527 SAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
                              Q A+ + ++F     +LTS+D +FN+        I++ALK 
Sbjct: 434 ------------------EQIAEAMRKNF-----SLTSMDFSFNDFSYKSFSFISEALKR 470

Query: 587 NEDVAVTS 594
           N+ +  +S
Sbjct: 471 NDKLLKSS 478



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           KNC  LL+ +L  + +GDE A+ +   L +N T T +DL GN +   G   +A +L++N+
Sbjct: 72  KNCSGLLF-SLKEHGLGDEAAKSLTKILSKNNTYTIVDLCGNRLRDTGCIELAPLLENNT 130

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC------QIGASGAEFVADMLRY 497
            I  LDL  N +G  GAKAL   L F+  + +L L          I   GA+ ++++L+ 
Sbjct: 131 SIVRLDLRSNDVGGKGAKALFNALLFNQTLTSLDLSGLSGINRNHISTKGAKHLSELLQQ 190

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--LAQSF 555
           N T+  L+L +NG+      G +G+      +     +    +  N +  A C  LA+  
Sbjct: 191 NQTLCQLNLASNGM------GSDGIRILCRGLVDNFSLTELDISSNNIGSAGCEFLAKVL 244

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
              N  L  + +  N+I D G   +   +K      +T  +L  N ++  G
Sbjct: 245 DSTN--LQKLIMERNQIGDKGVSIMCDKMKNMLTPTLTYWDLTENKISHEG 293



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 4/224 (1%)

Query: 169 MSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           M     GD+G+  + + +      T        N I+  G+ +   +L+ +  LKTL + 
Sbjct: 254 MERNQIGDKGVSIMCDKMKNMLTPTLTYWDLTENKISHEGVLSICEMLKIDKCLKTLKIE 313

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GD+G +    +L  N  +++L L    + DEGAK I +++  N  L+ L LNNN+I
Sbjct: 314 CNEFGDKGAEEFAQLLEINKTLKKLFLGENAIGDEGAKEIGKVMALNKTLKTLFLNNNLI 373

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             SG   +   L + + ++ L L+ N  G      +A+ L  N+SL+ L+L  N + + G
Sbjct: 374 KDSGTKRIMIGLTDGTKLKHLDLSFNRIGDRAGVEIARVLATNRSLKTLNLKQNELKESG 433

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            +  ++    +   L  +D   N  S K    ++E +K    LL
Sbjct: 434 EQ--IAEAMRKNFSLTSMDFSFNDFSYKSFSFISEALKRNDKLL 475



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 1/151 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   ++ +    FGD+G    A+ L  N+T +++    N I   G K    V+  N  LK
Sbjct: 305 KCLKTLKIECNEFGDKGAEEFAQLLEINKTLKKLFLGENAIGDEGAKEIGKVMALNKTLK 364

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL L+ N I D G K +   L D   ++ L LS   + D     IA +L  N  L+ L L
Sbjct: 365 TLFLNNNLIKDSGTKRIMIGLTDGTKLKHLDLSFNRIGDRAGVEIARVLATNRSLKTLNL 424

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             N +  SG   +AEA+ +N ++ S+  + N
Sbjct: 425 KQNELKESG-EQIAEAMRKNFSLTSMDFSFN 454


>gi|320163012|gb|EFW39911.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 353

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 169/338 (50%), Gaps = 12/338 (3%)

Query: 156 EFAKELRAF------SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           + A+ LR        +S ++S    GD     +AE+L  N+T   + F  N +  AG +A
Sbjct: 7   QLAERLRKLHDKIKNTSGELSASWIGDAEAQAIAETLKENKTVTTIYFE-NRMGDAGAQA 65

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
              VL+ N  L  L L  N IGD G + + + L  N  +  L L    + D GA+AIAE 
Sbjct: 66  IAEVLKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIGDAGAQAIAEA 125

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N  L +L L+ N I   G  ++AE L  N+T++ LHLN N  G  GA A+A+ L  N
Sbjct: 126 LKENKTLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQAIAEALNVN 185

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +L  + L GN     G+  L +    +K  L + D+   S++ +    + +++KN    
Sbjct: 186 TTLSMIGLDGNRFSLSGVLILKA--VCKKRWLHLEDVLQQSMTPR-QLGLYDHVKNGNGA 242

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L  N IG   A  IA+ALK N T+T + L  N I   GA AIA  LK+N  +  LD
Sbjct: 243 --VVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEALKENKTLAQLD 300

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           L  N IG  GA A++E LK +  +  L L    I  SG
Sbjct: 301 LHMNQIGDVGAHAIAEALKVNTTLIQLLLDGNSISHSG 338



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 158/339 (46%), Gaps = 62/339 (18%)

Query: 332 LRELH---------LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           LR+LH         L  + IGD   +A+   L   K    +     N +   GA  +AE 
Sbjct: 12  LRKLHDKIKNTSGELSASWIGDAEAQAIAETLKENKTVTTIY--FENRMGDAGAQAIAEV 69

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K  K+L  + L  N IGD GA+ IA+AL  N+T+TT+ L  N I   GA AIA  LK+N
Sbjct: 70  LKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIGDAGAQAIAEALKEN 129

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +T L L+ N IG DGA A++EVLK +  +  L L   QIG +GA+ +A+ L  N T+S
Sbjct: 130 KTLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQAIAEALNVNTTLS 189

Query: 503 ILDLRAN----------------------------------GLRDEVCSG-------CNG 521
           ++ L  N                                  GL D V +G        N 
Sbjct: 190 MIGLDGNRFSLSGVLILKAVCKKRWLHLEDVLQQSMTPRQLGLYDHVKNGNGAVVLSGNQ 249

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQ-------GAKCLAQSFKVVNEALTSIDLAFNEIRD 574
           +    +   +    +  +L + +LQ       GA+ +A++ K  N+ L  +DL  N+I D
Sbjct: 250 IGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEALKE-NKTLAQLDLHMNQIGD 308

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            GA AIA+ALK N    +  L L  N ++  G +AL  A
Sbjct: 309 VGAHAIAEALKVN--TTLIQLLLDGNSISHSGVTALKAA 345



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 159/358 (44%), Gaps = 80/358 (22%)

Query: 241 ILVDNAGV-ERL------------QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           +LVDN+ + ERL            +LS+  + D  A+AIAE LK N  +  +   N M D
Sbjct: 1   MLVDNSQLAERLRKLHDKIKNTSGELSASWIGDAEAQAIAETLKENKTVTTIYFENRMGD 60

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
            +G  ++AE L  N T+ +L+L+ N  G  GA A+A+ L  NK+L  L+L  N IGD G 
Sbjct: 61  -AGAQAIAEVLKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIGDAGA 119

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           +A+   L   K  L +L +  N I   GA+ +AE +K   +L  ++L  N IGD GA+ I
Sbjct: 120 QAIAEALKENK-TLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQAI 178

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-------------------------- 441
           A+AL  N T++ I L GN     G   +  V K                           
Sbjct: 179 AEALNVNTTLSMIGLDGNRFSLSGVLILKAVCKKRWLHLEDVLQQSMTPRQLGLYDHVKN 238

Query: 442 --------------------------NSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
                                     N+ +T L L  N IG  GA+A++E LK +  +  
Sbjct: 239 GNGAVVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEALKENKTLAQ 298

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
           L L   QIG  GA  +A+ L+ N T+  L L  N             S  HS + +LK
Sbjct: 299 LDLHMNQIGDVGAHAIAEALKVNTTLIQLLLDGN-------------SISHSGVTALK 343



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 53/325 (16%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           F  ++     Q + E  K  +  +++ +     GD G   +AE+L  N+T   +    N 
Sbjct: 54  FENRMGDAGAQAIAEVLKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQ 113

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I  AG +A    L+ N  L  L+LS N IGD+G   + ++L  N  +++L L+   + D 
Sbjct: 114 IGDAGAQAIAEALKENKTLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDA 173

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSG-----------FTSLAEALLENSTIRSLHL- 309
           GA+AIAE L  N+ L ++ L+ N    SG           +  L + L ++ T R L L 
Sbjct: 174 GAQAIAEALNVNTTLSMIGLDGNRFSLSGVLILKAVCKKRWLHLEDVLQQSMTPRQLGLY 233

Query: 310 ----NGNYGGALGANALA--------KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
               NGN    L  N +         + L+ N +L  L L  N IGD G +A        
Sbjct: 234 DHVKNGNGAVVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQA-------- 285

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
                                +AE +K  K+L  ++L+MN IGD GA  IA+ALK N T+
Sbjct: 286 ---------------------IAEALKENKTLAQLDLHMNQIGDVGAHAIAEALKVNTTL 324

Query: 418 TTIDLGGNNIHSKGASAIARVLKDN 442
             + L GN+I   G +A+    K N
Sbjct: 325 IQLLLDGNSISHSGVTALKAACKAN 349



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 80/183 (43%), Gaps = 24/183 (13%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI---KA--------FDGVLQSNIALKT 222
            GD G   +AE+L  N T   +    N  + +G+   KA         + VLQ ++  + 
Sbjct: 170 IGDAGAQAIAEALNVNTTLSMIGLDGNRFSLSGVLILKAVCKKRWLHLEDVLQQSMTPRQ 229

Query: 223 LN-------------LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           L              LSGN IG      + + L  N  +  L L    + D GA+AIAE 
Sbjct: 230 LGLYDHVKNGNGAVVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEA 289

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N  L  L+L+ N I   G  ++AEAL  N+T+  L L+GN     G  AL    + N
Sbjct: 290 LKENKTLAQLDLHMNQIGDVGAHAIAEALKVNTTLIQLLLDGNSISHSGVTALKAACKAN 349

Query: 330 KSL 332
             L
Sbjct: 350 CQL 352


>gi|320163988|gb|EFW40887.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 451

 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 137/253 (54%), Gaps = 11/253 (4%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +    I    A  +AE +K  ++L  +NL +N IGD GA+ IA+ALK N T+T + LG
Sbjct: 25  LHLNCKQIGVAEAQAIAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVNTTLTVLFLG 84

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           G  I   GA AIA  LK N+ +T+L L  N IG  GA+A +E LK +  +  L L W QI
Sbjct: 85  GTQIGDIGALAIAEALKVNTTLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQI 144

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G +GA+  A+ L+ N T++ L L  N +      G  G+     A+   K +    L  N
Sbjct: 145 GDAGAQAFAEALKANTTLTQLQLDFNQI------GEVGMQAIAEALQVNKTLTLLYLKEN 198

Query: 544 YL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                GA+ +A++ K VN  LT + L  N+I D GA AIA+ALK N+   VT L+L  N 
Sbjct: 199 RFGDVGAQAIAEALK-VNTTLTELRLNDNQIGDGGACAIAEALKVNK--TVTRLSLDRNC 255

Query: 602 LTKFGQSALTDAK 614
           +   G  A  +A+
Sbjct: 256 IGSVGSQAFDEAR 268



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 133/275 (48%), Gaps = 29/275 (10%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+      I  A  +A    L+ N  L  LNL+ N IGD G + + + L  N  +  L L
Sbjct: 24  ELHLNCKQIGVAEAQAIAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVNTTLTVLFL 83

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               + D GA AIAE LK N+ L  L L NN I  +G  + AEAL  N+ +  L L+ N 
Sbjct: 84  GGTQIGDIGALAIAEALKVNTTLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQ 143

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA A A+ L+ N +L +L L  N IG+ G++A                        
Sbjct: 144 IGDAGAQAFAEALKANTTLTQLQLDFNQIGEVGMQA------------------------ 179

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
                +AE ++  K+L  + L  N  GD GA+ IA+ALK N T+T + L  N I   GA 
Sbjct: 180 -----IAEALQVNKTLTLLYLKENRFGDVGAQAIAEALKVNTTLTELRLNDNQIGDGGAC 234

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           AIA  LK N  +T L L  N IG+ G++A  E  K
Sbjct: 235 AIAEALKVNKTVTRLSLDRNCIGSVGSQAFDEARK 269



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 2/237 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  R  + ++++    GD G   +AE+L  N T   +      I   G  A  
Sbjct: 38  QAIAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVNTTLTVLFLGGTQIGDIGALAIA 97

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L+L  N IGD G +   + L  N  +  L L    + D GA+A AE LK
Sbjct: 98  EALKVNTTLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQIGDAGAQAFAEALK 157

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L+L+ N I   G  ++AEAL  N T+  L+L  N  G +GA A+A+ L+ N +
Sbjct: 158 ANTTLTQLQLDFNQIGEVGMQAIAEALQVNKTLTLLYLKENRFGDVGAQAIAEALKVNTT 217

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK 387
           L EL L+ N IGD G  A+   L   K  +  L +  N I + G+    E  K NC+
Sbjct: 218 LTELRLNDNQIGDGGACAIAEALKVNK-TVTRLSLDRNCIGSVGSQAFDEARKGNCR 273


>gi|290997932|ref|XP_002681535.1| predicted protein [Naegleria gruberi]
 gi|284095159|gb|EFC48791.1| predicted protein [Naegleria gruberi]
          Length = 448

 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 220/454 (48%), Gaps = 100/454 (22%)

Query: 220 LKTLNLSGNPIGDEGVKCLC--------DILVDNAGV-------ERLQLSSVD-----LR 259
           LK L++  N IGDEG K +         DI     G        E  QL+S+D     + 
Sbjct: 4   LKLLDIGENQIGDEGAKSISEMKQLTSLDICYSRIGAEGAKFISEMKQLTSLDIGGNEIG 63

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEG+K I+E+ +    L  L ++NN I   G  S++E       + SL +N N  G  GA
Sbjct: 64  DEGSKYISEMKQ----LTSLNIDNNRIGDEGAKSISEM----KQLTSLSINNNEIGVEGA 115

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            ++++     K L  L + GN IGD+G++ +     S   +L +LDIG N I  +G+ ++
Sbjct: 116 KSISE----MKQLTSLDISGNGIGDKGVKFI-----SEMKQLKLLDIGGNEIGDEGSKYI 166

Query: 380 AEY--------------------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +E                     I   K L  +++Y N IGDEGA+ I++     + +T+
Sbjct: 167 SEMKQLTSLNIGENRIGDEGVKSISEMKQLTSLSIYNNRIGDEGAKSISEM----KQLTS 222

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +D+ GN I  KG  +I+ + +    +TSLD++ N IG +GAK +SE+ +       L +G
Sbjct: 223 LDISGNGIGDKGVKSISEMKQ----LTSLDISGNGIGDEGAKFISEMKQLK----LLDIG 274

Query: 480 WCQIGASGAEFVADMLR------YNNTISILDLRANGLRDEVCS--------GCNGLSFF 525
             +IG  G++++++M +      YNN I +  +++     ++ S        G  G+   
Sbjct: 275 GNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNNQIGVEGV--- 331

Query: 526 HSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
             +I  +K +   ++C N +  +G K +++      + L S+++  N I D+G  +I++ 
Sbjct: 332 -KSISEMKQLKSLNICYNEIGDKGVKFISEM-----KQLISLNIGGNGIGDEGVKSISEM 385

Query: 584 LKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
            +      +TSLN++ N +   G   +++ K L 
Sbjct: 386 KQ------LTSLNISKNRIGAEGSKFISEMKQLT 413



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 227/449 (50%), Gaps = 82/449 (18%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAE-------SLGYNQTAEE-------------V 195
           +F  E++  +S+D+ G   GDEG  +++E       ++  N+  +E             +
Sbjct: 44  KFISEMKQLTSLDIGGNEIGDEGSKYISEMKQLTSLNIDNNRIGDEGAKSISEMKQLTSL 103

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   N I   G K+   + Q    L +L++SGN IGD+GVK + ++      ++ L +  
Sbjct: 104 SINNNEIGVEGAKSISEMKQ----LTSLDISGNGIGDKGVKFISEM----KQLKLLDIGG 155

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            ++ DEG+K I+E+ +    L  L +  N I   G  S++E       + SL +  N  G
Sbjct: 156 NEIGDEGSKYISEMKQ----LTSLNIGENRIGDEGVKSISEM----KQLTSLSIYNNRIG 207

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ++++     K L  L + GN IGD+G++++     S   +L  LDI  N I  +G
Sbjct: 208 DEGAKSISE----MKQLTSLDISGNGIGDKGVKSI-----SEMKQLTSLDISGNGIGDEG 258

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  ++E     K L  +++  N+IGDEG++ I++     + +T++++  N I  +G  +I
Sbjct: 259 AKFISE----MKQLKLLDIGGNEIGDEGSKYISEM----KQLTSLNIYNNEIGVEGVKSI 310

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           + + +    +TSL +  N IG +G K++SE+ +      +L + + +IG  G +F+++M 
Sbjct: 311 SEMKQ----LTSLYIYNNQIGVEGVKSISEMKQLK----SLNICYNEIGDKGVKFISEMK 362

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQ 553
           +    IS L++  NG+ DE             +I  +K +   ++  N +  +G+K +++
Sbjct: 363 QL---IS-LNIGGNGIGDEGV----------KSISEMKQLTSLNISKNRIGAEGSKFISE 408

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
                 + LTS+D+ +NEI  +G  +I++
Sbjct: 409 M-----KQLTSLDICYNEIGGEGVKSISE 432



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 171/340 (50%), Gaps = 67/340 (19%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAE-------SLGYNQTAEE-------------V 195
           +F  E++    +D+ G   GDEG  +++E       ++G N+  +E             +
Sbjct: 140 KFISEMKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIGENRIGDEGVKSISEMKQLTSL 199

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   N I   G K+   + Q    L +L++SGN IGD+GVK +          E  QL+S
Sbjct: 200 SIYNNRIGDEGAKSISEMKQ----LTSLDISGNGIGDKGVKSIS---------EMKQLTS 246

Query: 256 VDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           +D+      DEGAK I+E+ +    L++L++  N I   G   ++E       + SL++ 
Sbjct: 247 LDISGNGIGDEGAKFISEMKQ----LKLLDIGGNEIGDEGSKYISEM----KQLTSLNIY 298

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  G  ++++     K L  L+++ N IG EG++++     S   +L  L+I  N 
Sbjct: 299 NNEIGVEGVKSISE----MKQLTSLYIYNNQIGVEGVKSI-----SEMKQLKSLNICYNE 349

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I  KG   ++E     K L+ +N+  N IGDEG + I++     + +T++++  N I ++
Sbjct: 350 IGDKGVKFISE----MKQLISLNIGGNGIGDEGVKSISEM----KQLTSLNISKNRIGAE 401

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           G+  I+ + +    +TSLD+ YN IG +G K++SE+ +  
Sbjct: 402 GSKFISEMKQ----LTSLDICYNEIGGEGVKSISEMKQLK 437



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 141/260 (54%), Gaps = 43/260 (16%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L +LDIG N I  +GA  ++E     K L  +++  + IG EGA+ I++     + +T+
Sbjct: 3   QLKLLDIGENQIGDEGAKSISE----MKQLTSLDICYSRIGAEGAKFISEM----KQLTS 54

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +D+GGN I  +G+  I+ + +    +TSL++  N IG +GAK++SE+ +      +L + 
Sbjct: 55  LDIGGNEIGDEGSKYISEMKQ----LTSLNIDNNRIGDEGAKSISEMKQL----TSLSIN 106

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
             +IG  GA+ +++M +    ++ LD+  NG+ D+      G+ F    I  +K +    
Sbjct: 107 NNEIGVEGAKSISEMKQ----LTSLDISGNGIGDK------GVKF----ISEMKQLKLLD 152

Query: 540 LCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           +  N +  +G+K +++      + LTS+++  N I D+G  +I++  +      +TSL++
Sbjct: 153 IGGNEIGDEGSKYISEM-----KQLTSLNIGENRIGDEGVKSISEMKQ------LTSLSI 201

Query: 598 ANNFLTKFGQSALTDAKDLV 617
            NN +   G  ++++ K L 
Sbjct: 202 YNNRIGDEGAKSISEMKQLT 221



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 111/224 (49%), Gaps = 49/224 (21%)

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           + +  +D+G N I  +GA +I+ + +    +TSLD+ Y+ IGA+GAK +SE+ +      
Sbjct: 2   KQLKLLDIGENQIGDEGAKSISEMKQ----LTSLDICYSRIGAEGAKFISEMKQL----T 53

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           +L +G  +IG  G++++++M +    ++ L++  N + DE             +I  +K 
Sbjct: 54  SLDIGGNEIGDEGSKYISEMKQ----LTSLNIDNNRIGDEGA----------KSISEMKQ 99

Query: 535 MLFYSLCINYL--QGAKCLAQ-----------------SFKVVNE--ALTSIDLAFNEIR 573
           +   S+  N +  +GAK +++                   K ++E   L  +D+  NEI 
Sbjct: 100 LTSLSINNNEIGVEGAKSISEMKQLTSLDISGNGIGDKGVKFISEMKQLKLLDIGGNEIG 159

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
           D+G+  I++  +      +TSLN+  N +   G  ++++ K L 
Sbjct: 160 DEGSKYISEMKQ------LTSLNIGENRIGDEGVKSISEMKQLT 197


>gi|294718617|gb|ADF32021.1| leucine rich repeat containing protein 2 [Azumapecten farreri]
          Length = 425

 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 5/296 (1%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+   + D   + LC  L +N  V  L L   DL + GAK IA+LL+    L+ L L  N
Sbjct: 56  LTEKRLVDSDAEALCKTLSNNTYVHGLDLRYNDLTNVGAKHIAKLLEETVTLKYLNLMCN 115

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I+  G  ++A+AL +N ++R L LNGN  G  G    A+ L+ NK L  L L    +  
Sbjct: 116 EIESEGAEAIAKALHKNESLRVLRLNGNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTI 175

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           E + AL + L  R   L  L++      S   +   H A+ +K   SL  ++L   D+ D
Sbjct: 176 EAVIALPTVL-HRNSTLKALNVNRPLLFSCQEETTVHFAKMLKTNTSLEELHLQKYDMRD 234

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA ++A+ L  N + T +DL  N I   G   +A+VLK+N+ I  LDL +N +  DGA 
Sbjct: 235 FGATRLAENLMDNMSFTYLDLSCNRITRDGTKELAKVLKNNTSIKILDLGFNRLEDDGAM 294

Query: 462 ALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            L+E L  ++  + TL +    IG  G    AD ++ N T++ + +  N L +  C
Sbjct: 295 HLAEALATYNTTLETLVVASNNIGNKGLCASADAMKTNTTLTSIFIWGNMLEEPAC 350



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 8/314 (2%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           FT    +E +  + EF + +  + + +   ++ +   D     L ++L  N     +   
Sbjct: 26  FTLMFDKEKEDAVFEFKESMDLYLAGNNKLLTEKRLVDSDAEALCKTLSNNTYVHGLDLR 85

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +T  G K    +L+  + LK LNL  N I  EG + +   L  N  +  L+L+   +
Sbjct: 86  YNDLTNVGAKHIAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLNGNKI 145

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            + G    A++L+ N +L  L+L +  +      +L   L  NST+++L++N     +  
Sbjct: 146 GNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLLFSCQ 205

Query: 319 ANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
                  AK L+ N SL ELHL    + D G   L   L         LD+  N I+  G
Sbjct: 206 EETTVHFAKMLKTNTSLEELHLQKYDMRDFGATRLAENLMDNMS-FTYLDLSCNRITRDG 264

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASA 434
              +A+ +KN  S+  ++L  N + D+GA  +A+AL   N T+ T+ +  NNI +KG  A
Sbjct: 265 TKELAKVLKNNTSIKILDLGFNRLEDDGAMHLAEALATYNTTLETLVVASNNIGNKGLCA 324

Query: 435 IARVLKDNSVITSL 448
            A  +K N+ +TS+
Sbjct: 325 SADAMKTNTTLTSI 338



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 128/257 (49%), Gaps = 17/257 (6%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N ++  GA H+A+ ++   +L ++NL  N+I  EGAE IA AL +N ++  + L 
Sbjct: 82  LDLRYNDLTNVGAKHIAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLN 141

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-----NINTLKL 478
           GN I ++G    A++L+ N V+ +LDL    +  +   AL  VL  +      N+N   L
Sbjct: 142 GNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLL 201

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
             CQ   +   F A ML+ N ++  L L+   +RD       G +     +       + 
Sbjct: 202 FSCQ-EETTVHF-AKMLKTNTSLEELHLQKYDMRD------FGATRLAENLMDNMSFTYL 253

Query: 539 SLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
            L  N +   G K LA+  K  N ++  +DL FN + DDGA  +A+AL A  +  + +L 
Sbjct: 254 DLSCNRITRDGTKELAKVLK-NNTSIKILDLGFNRLEDDGAMHLAEAL-ATYNTTLETLV 311

Query: 597 LANNFLTKFGQSALTDA 613
           +A+N +   G  A  DA
Sbjct: 312 VASNNIGNKGLCASADA 328



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 63/306 (20%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+   +  + G   +A+ L    T + ++   N I + G +A    L  N +L+ L L+
Sbjct: 82  LDLRYNDLTNVGAKHIAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLN 141

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN--- 283
           GN IG+ G  C   +L  N  +E L L   D+  E   A+  +L  NS L+ L +N    
Sbjct: 142 GNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLL 201

Query: 284 -----------------------------NMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
                                        +M D+ G T LAE L++N +   L L+ N  
Sbjct: 202 FSCQEETTVHFAKMLKTNTSLEELHLQKYDMRDF-GATRLAENLMDNMSFTYLDLSCNRI 260

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
              G   LAK L+ N S++                             +LD+G N +   
Sbjct: 261 TRDGTKELAKVLKNNTSIK-----------------------------ILDLGFNRLEDD 291

Query: 375 GAFHVAEYIKNCKSLL-WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           GA H+AE +    + L  + +  N+IG++G    ADA+K N T+T+I + GN +      
Sbjct: 292 GAMHLAEALATYNTTLETLVVASNNIGNKGLCASADAMKTNTTLTSIFIWGNMLEEPACI 351

Query: 434 AIARVL 439
           A A +L
Sbjct: 352 AFASLL 357



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 34/231 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G   G+ G    A+ L  N+  E +      +T   + A   VL  N  LK LN++  
Sbjct: 140 LNGNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVN-R 198

Query: 229 PI----GDEGVKCLCDILVDNAGVERLQLSSVDLRD------------------------ 260
           P+     +E       +L  N  +E L L   D+RD                        
Sbjct: 199 PLLFSCQEETTVHFAKMLKTNTSLEELHLQKYDMRDFGATRLAENLMDNMSFTYLDLSCN 258

Query: 261 ----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGG 315
               +G K +A++LKNN+ +++L+L  N ++  G   LAEAL   N+T+ +L +  N  G
Sbjct: 259 RITRDGTKELAKVLKNNTSIKILDLGFNRLEDDGAMHLAEALATYNTTLETLVVASNNIG 318

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
             G  A A  ++ N +L  + + GN + +    A  S L S + K    DI
Sbjct: 319 NKGLCASADAMKTNTTLTSIFIWGNMLEEPACIAFASLLDSGRLKPENTDI 369


>gi|320164173|gb|EFW41072.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 295

 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/275 (37%), Positives = 149/275 (54%), Gaps = 7/275 (2%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I A  ++A    LQ N  LK L+L  N IGD G   +   L  N  +  L L    +   
Sbjct: 27  IDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNKKLTTLNLGDNQIGSA 86

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+A+++ +   S L  L L+ N ID  G  ++A AL  ++++  L+L+ N  G  GA A
Sbjct: 87  GAQALSQAI---STLARLYLHENQIDNDGALAIANALKVSNSLTFLNLHQNQIGNAGAQA 143

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+ L  NK+L ++HL GN IGD+G RA+   L   K  LAVL +G+N I   GA  + E
Sbjct: 144 LAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNKA-LAVLGLGSNQIGDAGAQAIGE 202

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
              N K L+ ++L  N IGD GA  +  AL+ ++T+T + L  N I   GA A+A  +K 
Sbjct: 203 A--NPK-LIVLSLRQNKIGDAGAHALGRALQASKTLTGLILEENFIGVAGALALAEAIKV 259

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              +T L L  NP+G  GA+A+ E  K + ++  L
Sbjct: 260 TKTLTRLVLISNPVGDVGAQAIDEARKVNKSLTVL 294



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 164/294 (55%), Gaps = 12/294 (4%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           ++++T  +L+L G    A    A+A+ L+ N++L+EL L+ N IGD G  A+   LS  K
Sbjct: 12  VKSATNGTLYLGGRQIDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNK 71

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL  L++G+N I + GA  +++ I    +L  + L+ N I ++GA  IA+ALK + ++T
Sbjct: 72  -KLTTLNLGDNQIGSAGAQALSQAI---STLARLYLHENQIDNDGALAIANALKVSNSLT 127

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            ++L  N I + GA A+A  L  N  +T + L+ N IG DGA+A+ E LK +  +  L L
Sbjct: 128 FLNLHQNQIGNAGAQALAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNKALAVLGL 187

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
           G  QIG +GA+ + +    N  + +L LR N + D   +G + L     A  +L  ++  
Sbjct: 188 GSNQIGDAGAQAIGE---ANPKLIVLSLRQNKIGD---AGAHALGRALQASKTLTGLILE 241

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
              I  + GA  LA++ KV  + LT + L  N + D GA AI +A K N+ + V
Sbjct: 242 ENFIG-VAGALALAEAIKVT-KTLTRLVLISNPVGDVGAQAIDEARKVNKSLTV 293



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 114/212 (53%), Gaps = 16/212 (7%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T+ LGG  I +    AIA  L+ N  +  L L +N IG  GA A+++ L  +  + TL L
Sbjct: 19  TLYLGGRQIDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNKKLTTLNL 78

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGL-RDEVCSGCNGLSFFHSAIYSLKHMLF 537
           G  QIG++GA+ ++  +   +T++ L L  N +  D   +  N L   +S       + F
Sbjct: 79  GDNQIGSAGAQALSQAI---STLARLYLHENQIDNDGALAIANALKVSNS-------LTF 128

Query: 538 YSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            +L  N +   GA+ LA++   VN+ALT I L+ N+I DDGA AI +ALK N+ +AV  L
Sbjct: 129 LNLHQNQIGNAGAQALAEALS-VNKALTDIHLSGNQIGDDGARAIGEALKVNKALAV--L 185

Query: 596 NLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
            L +N +   G  A+ +A   +  +S ++  I
Sbjct: 186 GLGSNQIGDAGAQAIGEANPKLIVLSLRQNKI 217



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 31/184 (16%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E     +A + + +SG   GD+G   + E+L  N+                     
Sbjct: 142 QALAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNK--------------------- 180

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
                  AL  L L  N IGD G + + +    N  +  L L    + D GA A+   L+
Sbjct: 181 -------ALAVLGLGSNQIGDAGAQAIGEA---NPKLIVLSLRQNKIGDAGAHALGRALQ 230

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +  L  L L  N I  +G  +LAEA+    T+  L L  N  G +GA A+ +  + NKS
Sbjct: 231 ASKTLTGLILEENFIGVAGALALAEAIKVTKTLTRLVLISNPVGDVGAQAIDEARKVNKS 290

Query: 332 LREL 335
           L  L
Sbjct: 291 LTVL 294


>gi|219109652|ref|XP_002176580.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411115|gb|EEC51043.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 692

 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 226/483 (46%), Gaps = 47/483 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA---EEVSFAANGITAAGIKAFDG-VLQSNIA 219
             ++D+S     D G   LA  L    +      +    N I   G++   G +L+ N  
Sbjct: 181 LRTLDLSHNQIDDGGAILLAPVLDPEVSQSRLRRLDLTYNKIWPEGVRNLTGALLEGNRT 240

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL--- 276
           L+ LNLS N +G EG + L  +L  +  ++ L LS   L D G K + + L  + +L   
Sbjct: 241 LRCLNLSMNHVGPEGAESLAVLLKFSFTLQELLLSRNALGDHGVKLLCQGLDESKLLSGT 300

Query: 277 --RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
             + L+L+ N I   G   LA  LL+N+ + SL+L  N  G+ GA ALA  L  N++L  
Sbjct: 301 GLQRLDLDWNEIHDDGAKELATMLLDNAILESLNLASNAIGSDGAKALANALHSNQALTF 360

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKL-AVLDIGNNSISAKG------AF---------- 377
           L+L GN I D G  +L   L     ++  +L   NN ++  G      AF          
Sbjct: 361 LNLMGNQIRDPGAFSLAENLCRPSCRVETLLWEKNNCLTPLGEERLIAAFDFRKNRRTWL 420

Query: 378 -HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
             +   I+ C+S+ + NL    + DE    +A  L Q R  ++T  LGG+ +  +    +
Sbjct: 421 GQILREIETCQSVNF-NLLSCKLSDEEIMALAKHLAQYRPRVSTAYLGGHGVTVRSMKVL 479

Query: 436 AR-VLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           A+ VL +N V +  L L +  +G +GA AL+E L  + N+ TL L  C I   GA+ +A 
Sbjct: 480 AKDVLANNHVNLQRLHLQHTRVGDEGAGALAEALLSNSNLRTLTLFDCSISPEGAKLLAH 539

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH--MLFYSLCINYL-QGAKC 550
            L  N +++ L+L  N +      G  G     +A+    H  ++  +L  N +  GA  
Sbjct: 540 TLAQNKSLTQLNLHKNAI------GNRGAQELFTALVDPPHPSLVVLNLEQNEISDGALL 593

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL---KANEDVAVTSLNLANNFLTKFGQ 607
             QSF      L  +++A N   D  A  +A+A     AN  + ++ L ++NNF++K G 
Sbjct: 594 QFQSFG----RLQQLNIASNNFTDRAALDLAKACFNSLANGTLQLSWLTVSNNFISKKGL 649

Query: 608 SAL 610
            AL
Sbjct: 650 KAL 652



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 205/450 (45%), Gaps = 54/450 (12%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDL 258
           NG+T+        +L +   L+ L+LS N +  +G+  L   L  +   + RL L +  L
Sbjct: 75  NGLTSRSSVNLANILSTTQTLRELDLSDNQVESQGLLALLPALTHETCALRRLDLYNNKL 134

Query: 259 RDEGAKAIAELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
              GA  IA +L++N  LR L +  NN+        ++ AL  N+T+R+L L+ N     
Sbjct: 135 GATGATQIAAILRDNRSLRELRIGKNNLGRKKSLKVISTALQRNATLRTLDLSHNQIDDG 194

Query: 318 GANALAKGLEGNKS---LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GA  LA  L+   S   LR L L  N I  EG+R L   L      L  L++  N +  +
Sbjct: 195 GAILLAPVLDPEVSQSRLRRLDLTYNKIWPEGVRNLTGALLEGNRTLRCLNLSMNHVGPE 254

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT-----TIDLGGNNIHS 429
           GA  +A  +K   +L  + L  N +GD G + +   L +++ ++      +DL  N IH 
Sbjct: 255 GAESLAVLLKFSFTLQELLLSRNALGDHGVKLLCQGLDESKLLSGTGLQRLDLDWNEIHD 314

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA  +A +L DN+++ SL+LA N IG+DGAKAL+  L  +  +  L L   QI   GA 
Sbjct: 315 DGAKELATMLLDNAILESLNLASNAIGSDGAKALANALHSNQALTFLNLMGNQIRDPGAF 374

Query: 490 FVADML------------RYNNTISIL---------DLRANG-------LRD-EVCSGCN 520
            +A+ L              NN ++ L         D R N        LR+ E C   N
Sbjct: 375 SLAENLCRPSCRVETLLWEKNNCLTPLGEERLIAAFDFRKNRRTWLGQILREIETCQSVN 434

Query: 521 ----GLSFFHSAIYSL-KHMLFYSLCIN--YLQGAKCLAQSFKVVNEA--------LTSI 565
                       I +L KH+  Y   ++  YL G     +S KV+ +         L  +
Sbjct: 435 FNLLSCKLSDEEIMALAKHLAQYRPRVSTAYLGGHGVTVRSMKVLAKDVLANNHVNLQRL 494

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            L    + D+GA A+A+AL +N ++   +L
Sbjct: 495 HLQHTRVGDEGAGALAEALLSNSNLRTLTL 524



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 156/300 (52%), Gaps = 15/300 (5%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA  L   ++LREL L  N +  +G+ AL+  L+     L  LD+ NN + A GA  +A 
Sbjct: 85  LANILSTTQTLRELDLSDNQVESQGLLALLPALTHETCALRRLDLYNNKLGATGATQIAA 144

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEK-IADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +++ +SL  + +  N++G + + K I+ AL++N T+ T+DL  N I   GA  +A VL 
Sbjct: 145 ILRDNRSLRELRIGKNNLGRKKSLKVISTALQRNATLRTLDLSHNQIDDGGAILLAPVLD 204

Query: 441 ---DNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADML 495
                S +  LDL YN I  +G + L+  L   GN  +  L L    +G  GAE +A +L
Sbjct: 205 PEVSQSRLRRLDLTYNKIWPEGVRNLTGAL-LEGNRTLRCLNLSMNHVGPEGAESLAVLL 263

Query: 496 RYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLA 552
           +++ T+  L L  N L D  V   C GL    S + S   +    L  N +   GAK LA
Sbjct: 264 KFSFTLQELLLSRNALGDHGVKLLCQGLD--ESKLLSGTGLQRLDLDWNEIHDDGAKELA 321

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            +  + N  L S++LA N I  DGA A+A AL +N+  A+T LNL  N +   G  +L +
Sbjct: 322 -TMLLDNAILESLNLASNAIGSDGAKALANALHSNQ--ALTFLNLMGNQIRDPGAFSLAE 378



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 153/327 (46%), Gaps = 25/327 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-----DGVLQS 216
           R    +++S  + G EG   LA  L ++ T +E+  + N +   G+K       +  L S
Sbjct: 239 RTLRCLNLSMNHVGPEGAESLAVLLKFSFTLQELLLSRNALGDHGVKLLCQGLDESKLLS 298

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L+ L+L  N I D+G K L  +L+DNA +E L L+S  +  +GAKA+A  L +N  L
Sbjct: 299 GTGLQRLDLDWNEIHDDGAKELATMLLDNAILESLNLASNAIGSDGAKALANALHSNQAL 358

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHL--NGNYGGALGANALAKGLEGNKS--- 331
             L L  N I   G  SLAE L   S      L    N    LG   L    +  K+   
Sbjct: 359 TFLNLMGNQIRDPGAFSLAENLCRPSCRVETLLWEKNNCLTPLGEERLIAAFDFRKNRRT 418

Query: 332 -----LREL--------HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
                LRE+        +L    + DE I AL   L+  + +++   +G + ++ +    
Sbjct: 419 WLGQILREIETCQSVNFNLLSCKLSDEEIMALAKHLAQYRPRVSTAYLGGHGVTVRSMKV 478

Query: 379 VAEYI--KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           +A+ +   N  +L  ++L    +GDEGA  +A+AL  N  + T+ L   +I  +GA  +A
Sbjct: 479 LAKDVLANNHVNLQRLHLQHTRVGDEGAGALAEALLSNSNLRTLTLFDCSISPEGAKLLA 538

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKAL 463
             L  N  +T L+L  N IG  GA+ L
Sbjct: 539 HTLAQNKSLTQLNLHKNAIGNRGAQEL 565



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 20/253 (7%)

Query: 147 FRESKQT-LNEFAKELRAFSSVDMS--GRNFGDEGLFFLAESLG-YNQTAEEVSFAANGI 202
           FR++++T L +  +E+    SV+ +       DE +  LA+ L  Y           +G+
Sbjct: 412 FRKNRRTWLGQILREIETCQSVNFNLLSCKLSDEEIMALAKHLAQYRPRVSTAYLGGHGV 471

Query: 203 TAAGIK--AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           T   +K  A D +  +++ L+ L+L    +GDEG   L + L+ N+ +  L L    +  
Sbjct: 472 TVRSMKVLAKDVLANNHVNLQRLHLQHTRVGDEGAGALAEALLSNSNLRTLTLFDCSISP 531

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSG----FTSLAEALLENSTIRSLHLNGNYGGA 316
           EGAK +A  L  N  L  L L+ N I   G    FT+L +    +  + +L  N    GA
Sbjct: 532 EGAKLLAHTLAQNKSLTQLNLHKNAIGNRGAQELFTALVDPPHPSLVVLNLEQNEISDGA 591

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEG----IRALMSGLSSRKGKLAVLDIGNNSIS 372
           L         +    L++L++  N+  D       +A  + L++   +L+ L + NN IS
Sbjct: 592 L------LQFQSFGRLQQLNIASNNFTDRAALDLAKACFNSLANGTLQLSWLTVSNNFIS 645

Query: 373 AKGAFHVAEYIKN 385
            KG   +A ++ +
Sbjct: 646 KKGLKALALFLPD 658


>gi|320163559|gb|EFW40458.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 416

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/255 (36%), Positives = 133/255 (52%), Gaps = 14/255 (5%)

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A+D VL ++   + L+L    +GD   + + + L +N  +           D GAKAIAE
Sbjct: 8   AYDRVLNAS---RYLSLQREQLGDAEAQAVAEALKENTVIG----------DAGAKAIAE 54

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L+ N  L+ L L  N I   G  ++A+ L  N+T+ +L+LN N  G  GA A+A+ L  
Sbjct: 55  ALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQAIAEALTV 114

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L  L L  N IGD G RA    L   K  L  L +  N I   GA  +AE +K   +
Sbjct: 115 NGTLATLSLGENQIGDAGARATADALKVNKA-LTELHLSGNQIGDAGAQAIAEALKLNTT 173

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L     Y N +GD GA+ IA+ALK N ++T ++L  N I   GA AIA  LK N+ +T+L
Sbjct: 174 LTQFYFYKNQVGDAGAQAIAEALKVNSSLTEVNLDTNQIGDAGAQAIAEALKVNTTLTAL 233

Query: 449 DLAYNPIGADGAKAL 463
            L  N I   G +A+
Sbjct: 234 KLNNNCISDVGVQAI 248



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 134/271 (49%), Gaps = 39/271 (14%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L D  A+A+AE LK N++          I  +G  ++AEAL  N T++ L+L 
Sbjct: 19  LSLQREQLGDAEAQAVAEALKENTV----------IGDAGAKAIAEALRLNKTLQHLYLQ 68

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  GA A+A+ L  N +L  L+L+ N +GD G +A+   L+   G LA L +G N 
Sbjct: 69  QNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQAIAEALTV-NGTLATLSLGENQ 127

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I                            GD GA   ADALK N+ +T + L GN I   
Sbjct: 128 I----------------------------GDAGARATADALKVNKALTELHLSGNQIGDA 159

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  LK N+ +T      N +G  GA+A++E LK + ++  + L   QIG +GA+ 
Sbjct: 160 GAQAIAEALKLNTTLTQFYFYKNQVGDAGAQAIAEALKVNSSLTEVNLDTNQIGDAGAQA 219

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           +A+ L+ N T++ L L  N + D      +G
Sbjct: 220 IAEALKVNTTLTALKLNNNCISDVGVQAIDG 250



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 7/217 (3%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD GA+ IA+AL+ N+T+  + L  N I   GA AIA+ L+ N+ + +L L  N +G  
Sbjct: 44  IGDAGAKAIAEALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDG 103

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A++E L  +G + TL LG  QIG +GA   AD L+ N  ++ L L  N + D   +G
Sbjct: 104 GAQAIAEALTVNGTLATLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGD---AG 160

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
              ++       +L    FY   +    GA+ +A++ KV N +LT ++L  N+I D GA 
Sbjct: 161 AQAIAEALKLNTTLTQFYFYKNQVGD-AGAQAIAEALKV-NSSLTEVNLDTNQIGDAGAQ 218

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
           AIA+ALK N    +T+L L NN ++  G  A+  A++
Sbjct: 219 AIAEALKVN--TTLTALKLNNNCISDVGVQAIDGARN 253



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 102/202 (50%), Gaps = 1/202 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N+T + +    N I   G  A    L+ N  L TL L+ N +GD 
Sbjct: 44  IGDAGAKAIAEALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDG 103

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  L L    + D GA+A A+ LK N  L  L L+ N I  +G  +
Sbjct: 104 GAQAIAEALTVNGTLATLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQA 163

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T+   +   N  G  GA A+A+ L+ N SL E++L  N IGD G +A+   
Sbjct: 164 IAEALKLNTTLTQFYFYKNQVGDAGAQAIAEALKVNSSLTEVNLDTNQIGDAGAQAIAEA 223

Query: 354 LSSRKGKLAVLDIGNNSISAKG 375
           L      L  L + NN IS  G
Sbjct: 224 LKVNT-TLTALKLNNNCISDVG 244



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 93/177 (52%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD+G   +A++L  N T   +    N +   G +A    L  N  L TL+L  N IGD 
Sbjct: 72  IGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQAIAEALTVNGTLATLSLGENQIGDA 131

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G +   D L  N  +  L LS   + D GA+AIAE LK N+ L       N +  +G  +
Sbjct: 132 GARATADALKVNKALTELHLSGNQIGDAGAQAIAEALKLNTTLTQFYFYKNQVGDAGAQA 191

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           +AEAL  NS++  ++L+ N  G  GA A+A+ L+ N +L  L L+ N I D G++A+
Sbjct: 192 IAEALKVNSSLTEVNLDTNQIGDAGAQAIAEALKVNTTLTALKLNNNCISDVGVQAI 248



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 3/169 (1%)

Query: 157 FAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A+ LR  +++    ++    GD G   +AE+L  N T   +S   N I  AG +A    
Sbjct: 80  IAQTLRVNTTLHTLYLNDNQLGDGGAQAIAEALTVNGTLATLSLGENQIGDAGARATADA 139

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N AL  L+LSGN IGD G + + + L  N  + +       + D GA+AIAE LK N
Sbjct: 140 LKVNKALTELHLSGNQIGDAGAQAIAEALKLNTTLTQFYFYKNQVGDAGAQAIAEALKVN 199

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           S L  + L+ N I  +G  ++AEAL  N+T+ +L LN N    +G  A+
Sbjct: 200 SSLTEVNLDTNQIGDAGAQAIAEALKVNTTLTALKLNNNCISDVGVQAI 248


>gi|188501467|gb|ACD54599.1| unknown [Adineta vaga]
          Length = 264

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 140/250 (56%), Gaps = 9/250 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           RA SS+ +  + F D+ +  +   L  N   EE++  ++ IT+ G+      L  N  LK
Sbjct: 4   RALSSIKLCDQAFLDDDMVIIGIELAVNDNCEELTLRSSDITSIGVTHLGLGLTINCTLK 63

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+LSGNP+   GV  L  +L  N+ + +L L+SV++ DEG + +A +L  N  L  L +
Sbjct: 64  SLDLSGNPLSATGVANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAI 123

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLN----GNYGGALGANALAKGLEGNKSLRELHL 337
           +NN +  +G  +L EAL  N++++ LHL+    GN GGAL    + + L  N++LR++++
Sbjct: 124 SNNQLTATGLRALCEALETNTSLKFLHLSENNLGNEGGAL----VGRLLLNNETLRKIYM 179

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           +   IGD G+  +++ L  +   L  L +GNN I+ +    +AE I+  ++L    L+ N
Sbjct: 180 NSMGIGDSGLAIMLNAL-KKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLKIFELWKN 238

Query: 398 DIGDEGAEKI 407
            + D   E++
Sbjct: 239 SLSDTAEERL 248



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 5/250 (2%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           AL ++ L      D+ +  +   L  N   E L L S D+   G   +   L  N  L+ 
Sbjct: 5   ALSSIKLCDQAFLDDDMVIIGIELAVNDNCEELTLRSSDITSIGVTHLGLGLTINCTLKS 64

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N +  +G  +LA  L  NST+  LHLN    G  G   LA  L  N +L  L + 
Sbjct: 65  LDLSGNPLSATGVANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAIS 124

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +   G+RAL   L +    L  L +  N++  +G   V   + N ++L  I  YMN 
Sbjct: 125 NNQLTATGLRALCEALETNTS-LKFLHLSENNLGNEGGALVGRLLLNNETLRKI--YMNS 181

Query: 399 --IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IGD G   + +ALK+N T+  + +G N I  +   +IA +++ N  +   +L  N + 
Sbjct: 182 MGIGDSGLAIMLNALKKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLKIFELWKNSLS 241

Query: 457 ADGAKALSEV 466
               + L ++
Sbjct: 242 DTAEERLRKI 251



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 29/235 (12%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L ++ I   G T L   L  N T++SL L+GN   A G   LA+ L  N +L +LHL+
Sbjct: 37  LTLRSSDITSIGVTHLGLGLTINCTLKSLDLSGNPLSATGVANLARVLHHNSTLLKLHLN 96

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             ++GDEG++ L S L  +   L  L I NN ++A G                       
Sbjct: 97  SVNMGDEGVQTLASMLY-KNHTLDFLAISNNQLTATGL---------------------- 133

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
                   + +AL+ N ++  + L  NN+ ++G + + R+L +N  +  + +    IG  
Sbjct: 134 ------RALCEALETNTSLKFLHLSENNLGNEGGALVGRLLLNNETLRKIYMNSMGIGDS 187

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G   +   LK +  +  L +G   I     + +A+M++ N T+ I +L  N L D
Sbjct: 188 GLAIMLNALKKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLKIFELWKNSLSD 242



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 1/185 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +  EL L  + I   G+  L  GL+     L  LD+  N +SA G  ++A  + +  +
Sbjct: 31  NDNCEELTLRSSDITSIGVTHLGLGLTI-NCTLKSLDLSGNPLSATGVANLARVLHHNST 89

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           LL ++L   ++GDEG + +A  L +N T+  + +  N + + G  A+   L+ N+ +  L
Sbjct: 90  LLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAISNNQLTATGLRALCEALETNTSLKFL 149

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L+ N +G +G   +  +L  +  +  + +    IG SG   + + L+ N T+  L +  
Sbjct: 150 HLSENNLGNEGGALVGRLLLNNETLRKIYMNSMGIGDSGLAIMLNALKKNETLQKLTVGN 209

Query: 509 NGLRD 513
           N + D
Sbjct: 210 NFITD 214



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 8/211 (3%)

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           NC+ L    L  +DI   G   +   L  N T+ ++DL GN + + G + +ARVL  NS 
Sbjct: 33  NCEEL---TLRSSDITSIGVTHLGLGLTINCTLKSLDLSGNPLSATGVANLARVLHHNST 89

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L    +G +G + L+ +L  +  ++ L +   Q+ A+G   + + L  N ++  L
Sbjct: 90  LLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAISNNQLTATGLRALCEALETNTSLKFL 149

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
            L  N L +E  +    L   +    +L+ +   S+ I    G   +  + K  NE L  
Sbjct: 150 HLSENNLGNEGGALVGRLLLNNE---TLRKIYMNSMGIGD-SGLAIMLNALK-KNETLQK 204

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           + +  N I D    +IA+ ++AN+ + +  L
Sbjct: 205 LTVGNNFITDRSVQSIAEMIQANQTLKIFEL 235



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 9/204 (4%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+    I   L  N     + L  ++I S G + +   L  N  + SLDL+ NP+ A G 
Sbjct: 18  DDDMVIIGIELAVNDNCEELTLRSSDITSIGVTHLGLGLTINCTLKSLDLSGNPLSATGV 77

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
             L+ VL  +  +  L L    +G  G + +A ML  N+T+  L +  N L         
Sbjct: 78  ANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAISNNQLT------AT 131

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
           GL     A+ +   + F  L  N L      L     + NE L  I +    I D G   
Sbjct: 132 GLRALCEALETNTSLKFLHLSENNLGNEGGALVGRLLLNNETLRKIYMNSMGIGDSGLAI 191

Query: 580 IAQALKANEDVAVTSLNLANNFLT 603
           +  ALK NE   +  L + NNF+T
Sbjct: 192 MLNALKKNE--TLQKLTVGNNFIT 213


>gi|290994500|ref|XP_002679870.1| predicted protein [Naegleria gruberi]
 gi|284093488|gb|EFC47126.1| predicted protein [Naegleria gruberi]
          Length = 344

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K  +    + +     G EG   L E L +NQT  ++    N +   GIK+    L 
Sbjct: 23  EMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHLGGNKVDVVGIKSIADALI 82

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +N +L +L L  N IG +G+K L + L  N  +  +QL    ++  GA  ++  L  N  
Sbjct: 83  NNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSIKAMGASCLSTALITNQS 142

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+VLEL +N I   G  SL +AL +N ++ +L+ N N  G  GA  +A  L+ N S+  L
Sbjct: 143 LKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNELGDEGALYVANLLKVNPSITTL 202

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N I  +G  AL   L   +  +  LD+GNN I   GA  ++  +     L  ++L 
Sbjct: 203 GLANNRIRKKGAVALAEALKCEQTAVTGLDLGNNEIGNGGAVALSAALAVNTVLTSLDLR 262

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             +I  +G   +++  + N T+  +DLG N   ++GAS+ A+VL  N  +T L L  N I
Sbjct: 263 SCEIHLKGILALSNMAETNTTLRHLDLGANYAKNQGASSWAQVLSKNRSLTRLCLTDNQI 322

Query: 456 GADGAKALS 464
             +G +AL+
Sbjct: 323 YHEGGEALA 331



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 4/342 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   S+++ G    D     +AE L  N+  + +    N I   G +     L+ N  L 
Sbjct: 1   KQIISIELFGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLT 60

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L GN +   G+K + D L++N  +  L L    +  +G K +AE LK+N+ L  ++L
Sbjct: 61  QLHLGGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQL 120

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G + L+ AL+ N +++ L L  N  G +G  +L + L+ N S+  L+ + N 
Sbjct: 121 KGNSIKAMGASCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNE 180

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK--SLLWINLYMNDI 399
           +GDEG    ++ L      +  L + NN I  KGA  +AE +K C+  ++  ++L  N+I
Sbjct: 181 LGDEG-ALYVANLLKVNPSITTLGLANNRIRKKGAVALAEALK-CEQTAVTGLDLGNNEI 238

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G+ GA  ++ AL  N  +T++DL    IH KG  A++ + + N+ +  LDL  N     G
Sbjct: 239 GNGGAVALSAALAVNTVLTSLDLRSCEIHLKGILALSNMAETNTTLRHLDLGANYAKNQG 298

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           A + ++VL  + ++  L L   QI   G E +A  L+ N T+
Sbjct: 299 ASSWAQVLSKNRSLTRLCLTDNQIYHEGGEALAIGLQSNYTL 340



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 173/341 (50%), Gaps = 5/341 (1%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +    N +T A  +    +L++N  LK L L  N IG EG + L + L  N  + +L L 
Sbjct: 6   IELFGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHLG 65

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +   G K+IA+ L NN+ L  L L +N I   G   LAE L  N+ +  + L GN  
Sbjct: 66  GNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSI 125

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            A+GA+ L+  L  N+SL+ L L  N+IG  G+++L   L      +  L+  +N +  +
Sbjct: 126 KAMGASCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKDNH-SVHALNFNDNELGDE 184

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           GA +VA  +K   S+  + L  N I  +GA  +A+ALK  +T +T +DLG N I + GA 
Sbjct: 185 GALYVANLLKVNPSITTLGLANNRIRKKGAVALAEALKCEQTAVTGLDLGNNEIGNGGAV 244

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           A++  L  N+V+TSLDL    I   G  ALS + + +  +  L LG       GA   A 
Sbjct: 245 ALSAALAVNTVLTSLDLRSCEIHLKGILALSNMAETNTTLRHLDLGANYAKNQGASSWAQ 304

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           +L  N +++ L L  N +  E   G   L+    + Y+L++
Sbjct: 305 VLSKNRSLTRLCLTDNQIYHE---GGEALAIGLQSNYTLRN 342



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 127/225 (56%), Gaps = 12/225 (5%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           VAE +K  K L  + L  N IG EGA  + + LK N+T+T + LGGN +   G  +IA  
Sbjct: 21  VAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHLGGNKVDVVGIKSIADA 80

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L +N+ +TSL L  N IG+DG K L+E LK +  ++ ++L    I A GA  ++  L  N
Sbjct: 81  LINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSIKAMGASCLSTALITN 140

Query: 499 NTISILDLRANGLRD-EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSF 555
            ++ +L+L++N +    V S C  L   HS      H L ++   N L  +GA  +A   
Sbjct: 141 QSLKVLELQSNAIGPVGVKSLCQALKDNHSV-----HALNFN--DNELGDEGALYVANLL 193

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           K VN ++T++ LA N IR  GA A+A+ALK  E  AVT L+L NN
Sbjct: 194 K-VNPSITTLGLANNRIRKKGAVALAEALKC-EQTAVTGLDLGNN 236



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 35/276 (12%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+ L+ NK L+ L L  N IG EG R L  GL   +  L  L +G N +   G   +A+
Sbjct: 21  VAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQ-TLTQLHLGGNKVDVVGIKSIAD 79

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + N  SL  + L  N IG +G + +A+ LK N  ++ I L GN+I + GAS ++  L  
Sbjct: 80  ALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSIKAMGASCLSTALIT 139

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  +  L+L  N IG  G K+L + LK + +++ L     ++G  GA +VA++L+ N +I
Sbjct: 140 NQSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNELGDEGALYVANLLKVNPSI 199

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           + L L  N +R                                 +GA  LA++ K    A
Sbjct: 200 TTLGLANNRIRK--------------------------------KGAVALAEALKCEQTA 227

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           +T +DL  NEI + GA A++ AL  N    +TSL+L
Sbjct: 228 VTGLDLGNNEIGNGGAVALSAALAVN--TVLTSLDL 261



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 1/183 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           ++L +  K+  +  +++ +    GDEG  ++A  L  N +   +  A N I   G  A  
Sbjct: 159 KSLCQALKDNHSVHALNFNDNELGDEGALYVANLLKVNPSITTLGLANNRIRKKGAVALA 218

Query: 212 GVLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             L+    A+  L+L  N IG+ G   L   L  N  +  L L S ++  +G  A++ + 
Sbjct: 219 EALKCEQTAVTGLDLGNNEIGNGGAVALSAALAVNTVLTSLDLRSCEIHLKGILALSNMA 278

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           + N+ LR L+L  N     G +S A+ L +N ++  L L  N     G  ALA GL+ N 
Sbjct: 279 ETNTTLRHLDLGANYAKNQGASSWAQVLSKNRSLTRLCLTDNQIYHEGGEALAIGLQSNY 338

Query: 331 SLR 333
           +LR
Sbjct: 339 TLR 341


>gi|156372508|ref|XP_001629079.1| predicted protein [Nematostella vectensis]
 gi|156216071|gb|EDO37016.1| predicted protein [Nematostella vectensis]
          Length = 295

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 158/291 (54%), Gaps = 12/291 (4%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILR 277
           L  LN+S N IGDEG K + + L  +N  + +L +S  ++ DEGAK I E L   N  L 
Sbjct: 1   LTKLNISDNNIGDEGAKYIGEALGHENCKLTKLNISDNNIGDEGAKYIGEALGHENCKLT 60

Query: 278 VLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEG-NKSLREL 335
            L ++NN I   G   + EAL  EN  +  L+++ N  G  GA  + + L   N  L  L
Sbjct: 61  KLNISNNNIGDEGAKYIGEALAHENCKLTKLNISNNNIGDEGAKYIGEALANENCKLTHL 120

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWIN 393
           ++  N+IGDEG + +   L     KL  LDI    I  +GA ++ E +  +NCK L  +N
Sbjct: 121 NMRRNNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCK-LTKLN 179

Query: 394 LYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLA 451
           +  N+IGDEGA+ I +AL  +N  +T +++  NNI  +GA  I   L+ +N  +T LD+ 
Sbjct: 180 ISNNNIGDEGAKYIGEALANENCKLTHLNMRRNNIGDEGAKYICEELRHENCKLTQLDIK 239

Query: 452 YNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNT 500
           Y  IG +GAK + E L  H N  +  L +    IG  GA+++ + LR+ N 
Sbjct: 240 YTYIGDEGAKYIGEAL-GHENCKLTQLDISRTYIGDEGAKYICEALRHENC 289



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 37/321 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +++S  N GDEG  ++ E+LG+                            N  L  L
Sbjct: 1   LTKLNISDNNIGDEGAKYIGEALGH---------------------------ENCKLTKL 33

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKN-NSILRVLEL 281
           N+S N IGDEG K + + L  +N  + +L +S+ ++ DEGAK I E L + N  L  L +
Sbjct: 34  NISDNNIGDEGAKYIGEALGHENCKLTKLNISNNNIGDEGAKYIGEALAHENCKLTKLNI 93

Query: 282 NNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHG 339
           +NN I   G   + EAL  EN  +  L++  N  G  GA  + + L   N  L +L +  
Sbjct: 94  SNNNIGDEGAKYIGEALANENCKLTHLNMRRNNIGDEGAKYICEELRHENCKLTQLDIKY 153

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWINLYMN 397
             IGDEG + +   L     KL  L+I NN+I  +GA ++ E +  +NCK L  +N+  N
Sbjct: 154 TYIGDEGAKYIGEALGHENCKLTKLNISNNNIGDEGAKYIGEALANENCK-LTHLNMRRN 212

Query: 398 DIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPI 455
           +IGDEGA+ I + L+ +N  +T +D+    I  +GA  I   L  +N  +T LD++   I
Sbjct: 213 NIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCKLTQLDISRTYI 272

Query: 456 GADGAKALSEVLKFHGNINTL 476
           G +GAK + E L+ H N N L
Sbjct: 273 GDEGAKYICEALR-HENCNLL 292



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 158/293 (53%), Gaps = 21/293 (7%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSL 389
           L +L++  N+IGDEG + +   L     KL  L+I +N+I  +GA ++ E +  +NCK L
Sbjct: 1   LTKLNISDNNIGDEGAKYIGEALGHENCKLTKLNISDNNIGDEGAKYIGEALGHENCK-L 59

Query: 390 LWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITS 447
             +N+  N+IGDEGA+ I +AL  +N  +T +++  NNI  +GA  I   L  +N  +T 
Sbjct: 60  TKLNISNNNIGDEGAKYIGEALAHENCKLTKLNISNNNIGDEGAKYIGEALANENCKLTH 119

Query: 448 LDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNT-ISIL 504
           L++  N IG +GAK + E L+ H N  +  L + +  IG  GA+++ + L + N  ++ L
Sbjct: 120 LNMRRNNIGDEGAKYICEELR-HENCKLTQLDIKYTYIGDEGAKYIGEALGHENCKLTKL 178

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYS----LKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           ++  N + DE      G  +   A+ +    L H+      I   +GAK + +  +  N 
Sbjct: 179 NISNNNIGDE------GAKYIGEALANENCKLTHLNMRRNNIG-DEGAKYICEELRHENC 231

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            LT +D+ +  I D+GA  I +AL  +E+  +T L+++  ++   G   + +A
Sbjct: 232 KLTQLDIKYTYIGDEGAKYIGEAL-GHENCKLTQLDISRTYIGDEGAKYICEA 283



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 148/281 (52%), Gaps = 25/281 (8%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNC 386
           N  L +L++  N+IGDEG + +   L     KL  L+I NN+I  +GA ++ E +  +NC
Sbjct: 27  NCKLTKLNISDNNIGDEGAKYIGEALGHENCKLTKLNISNNNIGDEGAKYIGEALAHENC 86

Query: 387 KSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK-DNSV 444
           K L  +N+  N+IGDEGA+ I +AL  +N  +T +++  NNI  +GA  I   L+ +N  
Sbjct: 87  K-LTKLNISNNNIGDEGAKYIGEALANENCKLTHLNMRRNNIGDEGAKYICEELRHENCK 145

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ--IGASGAEFVADMLRYNNT-I 501
           +T LD+ Y  IG +GAK + E L  H N    KL      IG  GA+++ + L   N  +
Sbjct: 146 LTQLDIKYTYIGDEGAKYIGEALG-HENCKLTKLNISNNNIGDEGAKYIGEALANENCKL 204

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH--MLFYSLCINYL----QGAKCLAQSF 555
           + L++R N + DE      G  +       L+H       L I Y     +GAK + ++ 
Sbjct: 205 THLNMRRNNIGDE------GAKYI---CEELRHENCKLTQLDIKYTYIGDEGAKYIGEAL 255

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
              N  LT +D++   I D+GA  I +AL+ +E+  + S N
Sbjct: 256 GHENCKLTQLDISRTYIGDEGAKYICEALR-HENCNLLSCN 295



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 110/261 (42%), Gaps = 59/261 (22%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
            A E    + +++S  N GDEG  ++ E+L                              
Sbjct: 81  LAHENCKLTKLNISNNNIGDEGAKYIGEALA---------------------------NE 113

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELL-KNNS 274
           N  L  LN+  N IGDEG K +C+ L  +N  + +L +    + DEGAK I E L   N 
Sbjct: 114 NCKLTHLNMRRNNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENC 173

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L ++NN I   G   + EAL  N   +  HLN                        
Sbjct: 174 KLTKLNISNNNIGDEGAKYIGEALA-NENCKLTHLN------------------------ 208

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWI 392
             +  N+IGDEG + +   L     KL  LDI    I  +GA ++ E +  +NCK L  +
Sbjct: 209 --MRRNNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCK-LTQL 265

Query: 393 NLYMNDIGDEGAEKIADALKQ 413
           ++    IGDEGA+ I +AL+ 
Sbjct: 266 DISRTYIGDEGAKYICEALRH 286



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 4/153 (2%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIK 208
           +K    E   E    + +D+     GDEG  ++ E+LG+ N    +++ + N I   G K
Sbjct: 132 AKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCKLTKLNISNNNIGDEGAK 191

Query: 209 AF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAI 266
              + +   N  L  LN+  N IGDEG K +C+ L  +N  + +L +    + DEGAK I
Sbjct: 192 YIGEALANENCKLTHLNMRRNNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYI 251

Query: 267 AELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            E L   N  L  L+++   I   G   + EAL
Sbjct: 252 GEALGHENCKLTQLDISRTYIGDEGAKYICEAL 284


>gi|320163781|gb|EFW40680.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 622

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 130/250 (52%), Gaps = 29/250 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA AIAE LK N  L VL+L N  I  +   +LAEAL  ++T+ +L L       +   A
Sbjct: 13  GAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLGHTEIDHVDIQA 72

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A  L+ N +L  L+L  N IGD G  A                             +AE
Sbjct: 73  IAGALKVNTTLTWLNLGENRIGDVGAEA-----------------------------IAE 103

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K  K++  ++L  N I DEGA+ IA+ALK N T+T ++L  + I   G  AIA  LK 
Sbjct: 104 ALKVNKTVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKV 163

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  +T LDL  NPIG  GA+A+ E LK +  + +L L   QIG  GA+ +A+ L+ N T+
Sbjct: 164 NKTLTKLDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQIGDDGAKGIAEGLKVNKTL 223

Query: 502 SILDLRANGL 511
           + L L+ N L
Sbjct: 224 TFLYLKDNFL 233



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 136/280 (48%), Gaps = 41/280 (14%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SLRE       IG+ G  A+   L   K  L VLD+GN  I       +AE +    +L 
Sbjct: 3   SLRE-----KQIGEAGAHAIAEALKVNK-TLTVLDLGNRQIGVAAVKALAEALNVSTTLT 56

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L   +I     + IA ALK N T+T ++LG N I   GA AIA  LK N  +T LDL
Sbjct: 57  TLDLGHTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDL 116

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             N I  +GA+A++E LK +  +  L L   +IG  G + +AD L+ N T++ LDL  N 
Sbjct: 117 QQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENP 176

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFN 570
           + D                                 GA+ + ++ KV N  L S+ L  N
Sbjct: 177 IGD--------------------------------AGAQAIGEALKV-NTTLPSLHLYNN 203

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           +I DDGA  IA+ LK N+   +T L L +NFLT  G+ AL
Sbjct: 204 QIGDDGAKGIAEGLKVNK--TLTFLYLKDNFLTNAGRRAL 241



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 127/234 (54%), Gaps = 7/234 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA+A+A+ L+ NK+L  L L    IG   ++AL   L+     L  LD+G+  I   
Sbjct: 10  GEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVST-TLTTLDLGHTEIDHV 68

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
               +A  +K   +L W+NL  N IGD GAE IA+ALK N+T+T +DL  N I  +GA A
Sbjct: 69  DIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQA 128

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +T L+L+ + IG  G +A+++ LK +  +  L L    IG +GA+ + + 
Sbjct: 129 IAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEA 188

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
           L+ N T+  L L  N + D+   G  G++     +   K + F  L  N+L  A
Sbjct: 189 LKVNTTLPSLHLYNNQIGDD---GAKGIA---EGLKVNKTLTFLYLKDNFLTNA 236



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 1/241 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           ++L    IG+ G   + + L  N  +  L L +  +     KA+AE L  ++ L  L+L 
Sbjct: 2   ISLREKQIGEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLG 61

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +  ID+    ++A AL  N+T+  L+L  N  G +GA A+A+ L+ NK++ +L L  N I
Sbjct: 62  HTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQI 121

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            DEG +A+   L      L  L++  + I   G   +A+ +K  K+L  ++L+ N IGD 
Sbjct: 122 EDEGAQAIAEALKVNT-TLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDA 180

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ I +ALK N T+ ++ L  N I   GA  IA  LK N  +T L L  N +   G +A
Sbjct: 181 GAQAIGEALKVNTTLPSLHLYNNQIGDDGAKGIAEGLKVNKTLTFLYLKDNFLTNAGRRA 240

Query: 463 L 463
           L
Sbjct: 241 L 241



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +  +  G+ G   +AE+L  N+T   +      I  A +KA    L  +  L TL+L 
Sbjct: 2   ISLREKQIGEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLG 61

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
              I    ++ +   L  N  +  L L    + D GA+AIAE LK N  +  L+L  N I
Sbjct: 62  HTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQI 121

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
           +  G  ++AEAL  N+T+  L+L+ +  G +G  A+A  L+ NK+L +L L  N IGD G
Sbjct: 122 EDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAG 181

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +A                             + E +K   +L  ++LY N IGD+GA+ 
Sbjct: 182 AQA-----------------------------IGEALKVNTTLPSLHLYNNQIGDDGAKG 212

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           IA+ LK N+T+T + L  N + + G  A+ R
Sbjct: 213 IAEGLKVNKTLTFLYLKDNFLTNAGRRALRR 243



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 101/197 (51%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+  R  G   +  LAE+L  + T   +      I    I+A  G L+ N  L 
Sbjct: 25  KTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLGHTEIDHVDIQAIAGALKVNTTLT 84

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N IGD G + + + L  N  V +L L    + DEGA+AIAE LK N+ L  L L
Sbjct: 85  WLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNL 144

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + + I   G  ++A+AL  N T+  L L  N  G  GA A+ + L+ N +L  LHL+ N 
Sbjct: 145 SQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQ 204

Query: 342 IGDEGIRALMSGLSSRK 358
           IGD+G + +  GL   K
Sbjct: 205 IGDDGAKGIAEGLKVNK 221



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 2/160 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N+T  ++    N I   G +A    L+ N  L  LNLS + IG  
Sbjct: 93  IGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGV 152

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + D L  N  + +L L    + D GA+AI E LK N+ L  L L NN I   G   
Sbjct: 153 GGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQIGDDGAKG 212

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           +AE L  N T+  L+L  N+    G  AL +   GN + R
Sbjct: 213 IAEGLKVNKTLTFLYLKDNFLTNAGRRALRRS--GNTTCR 250



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 68/133 (51%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+      DEG   +AE+L  N T  E++ + + I   G +A    L+ N  L 
Sbjct: 109 KTVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLT 168

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  NPIGD G + + + L  N  +  L L +  + D+GAK IAE LK N  L  L L
Sbjct: 169 KLDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQIGDDGAKGIAEGLKVNKTLTFLYL 228

Query: 282 NNNMIDYSGFTSL 294
            +N +  +G  +L
Sbjct: 229 KDNFLTNAGRRAL 241



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q + E  K     + +++S    G  G   +A++L  N+T  ++    N I  AG +
Sbjct: 124 EGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQ 183

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           A    L+ N  L +L+L  N IGD+G K + + L  N  +  L L    L + G +A+
Sbjct: 184 AIGEALKVNTTLPSLHLYNNQIGDDGAKGIAEGLKVNKTLTFLYLKDNFLTNAGRRAL 241


>gi|428182042|gb|EKX50904.1| hypothetical protein GUITHDRAFT_103488 [Guillardia theta CCMP2712]
          Length = 591

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 205/433 (47%), Gaps = 21/433 (4%)

Query: 187 GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
           G+N   + +    N I   G+K    +L S + L+TLNL+ N IG  G K L +IL + +
Sbjct: 87  GWN-LVKSLDLEGNYIGTTGVKDLSCLLSSCVFLETLNLNENAIGSGGAKILAEILPNLS 145

Query: 247 GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
            +  L++ S  + DEG   +   L   + L +L+L +N +   G   L+  L ENS++  
Sbjct: 146 RLVELRMQSNYIHDEGLIVLTSALDRCNNLTLLDLADNDLGPVGMEFLSSKLAENSSLTH 205

Query: 307 LHLNGNYGGALGANALAKGL--EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           L L+ N  G  GA  LA  L      S++ L L GN I  EG   L     +    L  L
Sbjct: 206 LDLSNNAIGDEGATRLAANLFVSTKLSIKALSLRGNGITSEGAARLA----AALPPLGQL 261

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+G NSI A+GA  +A  I+   ++  ++L  N +G+EG   I   L Q   +  +DL  
Sbjct: 262 DLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQCSQLQELDLSC 321

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+     AS +A V+   + ++ + L+   IG++G   L+  L  +  +  L+L   QIG
Sbjct: 322 NSFGDHTASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVLRELRLNDNQIG 381

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN-----GLSFFHSAIYSLKHMLFYS 539
             G   +A  L     +  LDL  N    ++  G N     G+ F  + + S   +   S
Sbjct: 382 CEGIYLLASTLPQCGRLVSLDLSKN----QIALGWNDISDEGIGFLSAVLASCLRLKSLS 437

Query: 540 LCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           L  N+++   C  LA S    +  L +++L+ N++  +G   +A  L   E  ++T L+L
Sbjct: 438 LECNHIEEEGCSLLAVSLPSCSN-LNTLNLSSNDLESNGVIVLADVLSKCE--SLTHLSL 494

Query: 598 ANNFLTKFGQSAL 610
           +N  +   G + L
Sbjct: 495 SNCKIGSKGATGL 507



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 149/331 (45%), Gaps = 23/331 (6%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+   + G EG   +A S+        +  +AN +   G+     VL     L+ L+LS
Sbjct: 261 LDLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQCSQLQELDLS 320

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GD     L  ++   A + ++ LS+  +  EG   +A  L + S+LR L LN+N I
Sbjct: 321 CNSFGDHTASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVLRELRLNDNQI 380

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   LA  L +   + SL L+ N                     ++ L  N I DEG
Sbjct: 381 GCEGIYLLASTLPQCGRLVSLDLSKN---------------------QIALGWNDISDEG 419

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           I  L + L+S   +L  L +  N I  +G   +A  + +C +L  +NL  ND+   G   
Sbjct: 420 IGFLSAVLASCL-RLKSLSLECNHIEEEGCSLLAVSLPSCSNLNTLNLSSNDLESNGVIV 478

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +AD L +  ++T + L    I SKGA+ +A  L    V + LDL  N IG  GA   + V
Sbjct: 479 LADVLSKCESLTHLSLSNCKIGSKGATGLAHTLPRCKV-SFLDLQENKIGVAGAATFASV 537

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           L    +++  ++G   +G  G  F+   ++Y
Sbjct: 538 LPRCSHLSHFRVGRNNLGDEGESFLLGAVKY 568



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 173/383 (45%), Gaps = 20/383 (5%)

Query: 141 GFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ--TAEEVSFA 198
           G  G  F  SK   N       + + +D+S    GDEG   LA +L  +   + + +S  
Sbjct: 186 GPVGMEFLSSKLAENS------SLTHLDLSNNAIGDEGATRLAANLFVSTKLSIKALSLR 239

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            NGIT+ G      +  +   L  L+L  N IG EG   +   +     +  L LS+  L
Sbjct: 240 GNGITSEGAAR---LAAALPPLGQLDLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLL 296

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            +EG   I  +L   S L+ L+L+ N       + LA  +   + +  + L+    G+ G
Sbjct: 297 GEEGLSLIVSVLPQCSQLQELDLSCNSFGDHTASLLASVIPHCACLSKVSLSNTLIGSEG 356

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI-------GNNSI 371
              LA  L     LREL L+ N IG EGI  L S L  + G+L  LD+       G N I
Sbjct: 357 TGFLASSLPHYSVLRELRLNDNQIGCEGIYLLASTLP-QCGRLVSLDLSKNQIALGWNDI 415

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S +G   ++  + +C  L  ++L  N I +EG   +A +L     + T++L  N++ S G
Sbjct: 416 SDEGIGFLSAVLASCLRLKSLSLECNHIEEEGCSLLAVSLPSCSNLNTLNLSSNDLESNG 475

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
              +A VL     +T L L+   IG+ GA  L+  L     ++ L L   +IG +GA   
Sbjct: 476 VIVLADVLSKCESLTHLSLSNCKIGSKGATGLAHTLP-RCKVSFLDLQENKIGVAGAATF 534

Query: 492 ADMLRYNNTISILDLRANGLRDE 514
           A +L   + +S   +  N L DE
Sbjct: 535 ASVLPRCSHLSHFRVGRNNLGDE 557



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 175/421 (41%), Gaps = 48/421 (11%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E    L     + M      DEGL  L  +L        +  A N +   G++   
Sbjct: 135 KILAEILPNLSRLVELRMQSNYIHDEGLIVLTSALDRCNNLTLLDLADNDLGPVGMEFLS 194

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD----------- 260
             L  N +L  L+LS N IGDEG   L   L  +    +L + ++ LR            
Sbjct: 195 SKLAENSSLTHLDLSNNAIGDEGATRLAANLFVST---KLSIKALSLRGNGITSEGAARL 251

Query: 261 -------------------EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
                              EGA  IA  ++    +  L+L+ N++   G + +   L + 
Sbjct: 252 AAALPPLGQLDLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQC 311

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S ++ L L+ N  G   A+ LA  +     L ++ L    IG EG   L S L      L
Sbjct: 312 SQLQELDLSCNSFGDHTASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSL-PHYSVL 370

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY-------MNDIGDEGAEKIADALKQN 414
             L + +N I  +G + +A  +  C  L+ ++L         NDI DEG   ++  L   
Sbjct: 371 RELRLNDNQIGCEGIYLLASTLPQCGRLVSLDLSKNQIALGWNDISDEGIGFLSAVLASC 430

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
             + ++ L  N+I  +G S +A  L   S + +L+L+ N + ++G   L++VL    ++ 
Sbjct: 431 LRLKSLSLECNHIEEEGCSLLAVSLPSCSNLNTLNLSSNDLESNGVIVLADVLSKCESLT 490

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
            L L  C+IG+ GA  +A  L     +S LDL+ N +      G  G + F S +    H
Sbjct: 491 HLSLSNCKIGSKGATGLAHTLPRCK-VSFLDLQENKI------GVAGAATFASVLPRCSH 543

Query: 535 M 535
           +
Sbjct: 544 L 544



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 107/232 (46%), Gaps = 34/232 (14%)

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           G +G   ++ L L GN IG  G++ L   LSS    L  L++  N+I + GA  +AE + 
Sbjct: 84  GRDGWNLVKSLDLEGNYIGTTGVKDLSCLLSSCV-FLETLNLNENAIGSGGAKILAEILP 142

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           N   L+ + +  N I DEG   +  AL +   +T +DL  N++   G   ++  L +NS 
Sbjct: 143 NLSRLVELRMQSNYIHDEGLIVLTSALDRCNNLTLLDLADNDLGPVGMEFLSSKLAENSS 202

Query: 445 ITSLDLAYNPIGADGAKALS-----------EVLKFHGNINT----------------LK 477
           +T LDL+ N IG +GA  L+           + L   GN  T                L 
Sbjct: 203 LTHLDLSNNAIGDEGATRLAANLFVSTKLSIKALSLRGNGITSEGAARLAAALPPLGQLD 262

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI 529
           LG   IGA GA  +A  +R    IS LDL AN L +E      GLS   S +
Sbjct: 263 LGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEE------GLSLIVSVL 308


>gi|330840905|ref|XP_003292448.1| hypothetical protein DICPUDRAFT_50441 [Dictyostelium purpureum]
 gi|325077316|gb|EGC31037.1| hypothetical protein DICPUDRAFT_50441 [Dictyostelium purpureum]
          Length = 1029

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TLNL G   G + +K   +IL  N  +  L LSS  L +   + +AE +K N+ ++ L +
Sbjct: 486 TLNLEGINFGKKALKPFLNILTRNQDLTFLDLSSSQLSESNGELLAEFIKKNNTIQTLNI 545

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NN + Y     +A+AL  N +I SL L+      L    LAK L  N  +++L++    
Sbjct: 546 SNNDL-YEKTIDIADALQSNKSITSLSLSNTKSSNLIGKVLAKSLCVNHYIKKLNISHTK 604

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I   GI  L  GL   K  L  L + +  +  KGA  + + +K  + L  ++L  N I  
Sbjct: 605 ISHSGIIELAQGLKENKIHLENLILDDTDLQDKGASEIGDALKTNQYLQTLHLNFNSINS 664

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ I  ALK N ++  + LG N I +KG  +I++ LK N  +  L +  N I   G  
Sbjct: 665 SGAKSIGKALKYNSSLKVLQLGYNEIGAKGLESISKSLKVNKTLIELSVKNNLIPEKGGL 724

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           AL+E LK +  + ++      +G  G+  +  +L  N T++ +DL  N L   +    + 
Sbjct: 725 ALTEALKVNQKLESINFRGNFLGIKGSAALTKLLTSNQTLTFMDLSHNNLEKSITHKVHQ 784

Query: 522 L 522
           L
Sbjct: 785 L 785



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 2/214 (0%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           LA+SL  N   ++++ +   I+ +GI     G+ ++ I L+ L L    + D+G   + D
Sbjct: 585 LAKSLCVNHYIKKLNISHTKISHSGIIELAQGLKENKIHLENLILDDTDLQDKGASEIGD 644

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L  N  ++ L L+   +   GAK+I + LK NS L+VL+L  N I   G  S++++L  
Sbjct: 645 ALKTNQYLQTLHLNFNSINSSGAKSIGKALKYNSSLKVLQLGYNEIGAKGLESISKSLKV 704

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N T+  L +  N     G  AL + L+ N+ L  ++  GN +G +G  AL   L+S +  
Sbjct: 705 NKTLIELSVKNNLIPEKGGLALTEALKVNQKLESINFRGNFLGIKGSAALTKLLTSNQ-T 763

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L  +D+ +N++       V + +K  +    INL
Sbjct: 764 LTFMDLSHNNLEKSITHKVHQLLKKNQITNTINL 797



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 141/284 (49%), Gaps = 22/284 (7%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L G + G + ++  ++ L+ R   L  LD+ ++ +S      +AE+IK   ++  +N+
Sbjct: 487 LNLEGINFGKKALKPFLNILT-RNQDLTFLDLSSSQLSESNGELLAEFIKKNNTIQTLNI 545

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD----NSVITSLDL 450
             ND+ ++  + IADAL+ N++IT++ L      +K ++ I +VL      N  I  L++
Sbjct: 546 SNNDLYEKTID-IADALQSNKSITSLSLSN----TKSSNLIGKVLAKSLCVNHYIKKLNI 600

Query: 451 AYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++  I   G   L++ LK +  ++  L L    +   GA  + D L+ N  +  L L  N
Sbjct: 601 SHTKISHSGIIELAQGLKENKIHLENLILDDTDLQDKGASEIGDALKTNQYLQTLHLNFN 660

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDL 567
            +             ++S++  L+      L  N +  +G + +++S KV N+ L  + +
Sbjct: 661 SINSSGAKSIGKALKYNSSLKVLQ------LGYNEIGAKGLESISKSLKV-NKTLIELSV 713

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
             N I + G  A+ +ALK N+ +   S+N   NFL   G +ALT
Sbjct: 714 KNNLIPEKGGLALTEALKVNQKLE--SINFRGNFLGIKGSAALT 755



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 5/130 (3%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL-HGNSIGD-EGIRALMSGLSS 356
           L+ S ++++HL  N    L +  +++ L+   S+  L+L H  SI + E   AL   L +
Sbjct: 176 LKYSCLQTVHLRLNSSQELIS--ISEALKQRHSITHLNLSHNKSIKELESWIALGLALKA 233

Query: 357 RKGKLAVLDIGNNSISAKG-AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
               L  L++ +NS+   G +  +++ IK  +S+ WINL  N++  +    I + L+ N+
Sbjct: 234 PNQTLNQLNLSHNSLGTDGLSLIISDIIKTNRSINWINLSHNNLDQDENHSILETLQYNQ 293

Query: 416 TITTIDLGGN 425
           TIT +DL  N
Sbjct: 294 TITYLDLSNN 303



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 52/108 (48%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G +GL  +++SL  N+T  E+S   N I   G  A    L+ N  L+++N  GN +G +
Sbjct: 690 IGAKGLESISKSLKVNKTLIELSVKNNLIPEKGGLALTEALKVNQKLESINFRGNFLGIK 749

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           G   L  +L  N  +  + LS  +L       + +LLK N I   + L
Sbjct: 750 GSAALTKLLTSNQTLTFMDLSHNNLEKSITHKVHQLLKKNQITNTINL 797



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 171/431 (39%), Gaps = 84/431 (19%)

Query: 245 NAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           N  + +L LS   L  +G +  I++++K N  +  + L++N +D     S+ E L  N T
Sbjct: 235 NQTLNQLNLSHNSLGTDGLSLIISDIIKTNRSINWINLSHNNLDQDENHSILETLQYNQT 294

Query: 304 IRSLHLNGN-YGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS---SRK 358
           I  L L+ N Y  +L  +  L   +E ++SL  L+   NS      R  +SGL    S  
Sbjct: 295 ITYLDLSNNEYQLSLDVSPRLCSYIERSQSLTHLNFSHNS-----NRHPLSGLPRALSIN 349

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADA----- 410
             L  +DI   +I    +  + + +   K L  INL    ++++ +     I +A     
Sbjct: 350 QSLRQIDISCMTILPSESIDLLKVLIGSKFLTSINLQQVLLSNVNESFGVCIVNALAKRY 409

Query: 411 ----LKQNRTITTID----------------LGGNNIHSKGAS----AIARVLKDNSVIT 446
               L+    I+ ID                +  N IHS   S      +     +S  +
Sbjct: 410 NDYDLEDESCISFIDSTNSSSNNLNPSQTTVIVSNGIHSTNTSDNMITFSPSCSFSSSKS 469

Query: 447 SLD------LAYNPI----------GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           S+D        +NPI          G    K    +L  + ++  L L   Q+  S  E 
Sbjct: 470 SVDDDEFYIAPHNPILTLNLEGINFGKKALKPFLNILTRNQDLTFLDLSSSQLSESNGEL 529

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK-----------HMLFYS 539
           +A+ ++ NNTI  L++  N L ++     + L   + +I SL             +L  S
Sbjct: 530 LAEFIKKNNTIQTLNISNNDLYEKTIDIADALQ-SNKSITSLSLSNTKSSNLIGKVLAKS 588

Query: 540 LCINYL-------------QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           LC+N+               G   LAQ  K     L ++ L   +++D GA  I  ALK 
Sbjct: 589 LCVNHYIKKLNISHTKISHSGIIELAQGLKENKIHLENLILDDTDLQDKGASEIGDALKT 648

Query: 587 NEDVAVTSLNL 597
           N+ +    LN 
Sbjct: 649 NQYLQTLHLNF 659



 Score = 45.4 bits (106), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 39/262 (14%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           YI     +L +NL   + G +  +   + L +N+ +T +DL  + +       +A  +K 
Sbjct: 477 YIAPHNPILTLNLEGINFGKKALKPFLNILTRNQDLTFLDLSSSQLSESNGELLAEFIKK 536

Query: 442 NSVITSLDLAYNPIG------ADG---------------------AKALSEVLKFHGNIN 474
           N+ I +L+++ N +       AD                       K L++ L  +  I 
Sbjct: 537 NNTIQTLNISNNDLYEKTIDIADALQSNKSITSLSLSNTKSSNLIGKVLAKSLCVNHYIK 596

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
            L +   +I  SG   +A  L+ N   +  L L    L+D+      G S    A+ + +
Sbjct: 597 KLNISHTKISHSGIIELAQGLKENKIHLENLILDDTDLQDK------GASEIGDALKTNQ 650

Query: 534 HMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
           ++    L  N +   GAK + ++ K  N +L  + L +NEI   G  +I+++LK N+   
Sbjct: 651 YLQTLHLNFNSINSSGAKSIGKALK-YNSSLKVLQLGYNEIGAKGLESISKSLKVNK--T 707

Query: 592 VTSLNLANNFLTKFGQSALTDA 613
           +  L++ NN + + G  ALT+A
Sbjct: 708 LIELSVKNNLIPEKGGLALTEA 729


>gi|188501447|gb|ACD54580.1| unknown [Adineta vaga]
          Length = 264

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 140/250 (56%), Gaps = 9/250 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           RA SS+ +  + F D+ +  +   L  N   EE++  ++ IT+ G+      L  N  LK
Sbjct: 4   RALSSIKLCDQAFLDDDMVIIGIELAVNNNCEELTLRSSDITSIGVTHLGLGLTINCTLK 63

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+LSGNP+   GV  L  +L  N+ + +L L+SV++ DEG + +A +L  N  L  L +
Sbjct: 64  SLDLSGNPLSATGVANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAI 123

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLN----GNYGGALGANALAKGLEGNKSLRELHL 337
           +NN +  +G  +L EAL  N++++ LHL+    GN GGAL    + + +  N++LR++++
Sbjct: 124 SNNQLTATGLRALCEALETNTSLKFLHLSENNLGNEGGAL----VGRLVLNNETLRKIYM 179

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           +   IGD G+  +++ L  +   L  L +GNN I+ +    +AE I+  ++L    L+ N
Sbjct: 180 NSMGIGDSGLAIMLNAL-KKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLEIFELWKN 238

Query: 398 DIGDEGAEKI 407
            + D   E++
Sbjct: 239 SLSDTAEERL 248



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 5/250 (2%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           AL ++ L      D+ +  +   L  N   E L L S D+   G   +   L  N  L+ 
Sbjct: 5   ALSSIKLCDQAFLDDDMVIIGIELAVNNNCEELTLRSSDITSIGVTHLGLGLTINCTLKS 64

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N +  +G  +LA  L  NST+  LHLN    G  G   LA  L  N +L  L + 
Sbjct: 65  LDLSGNPLSATGVANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAIS 124

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +   G+RAL   L +    L  L +  N++  +G   V   + N ++L  I  YMN 
Sbjct: 125 NNQLTATGLRALCEALETNTS-LKFLHLSENNLGNEGGALVGRLVLNNETLRKI--YMNS 181

Query: 399 --IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IGD G   + +ALK+N T+  + +G N I  +   +IA +++ N  +   +L  N + 
Sbjct: 182 MGIGDSGLAIMLNALKKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLEIFELWKNSLS 241

Query: 457 ADGAKALSEV 466
               + L ++
Sbjct: 242 DTAEERLRKI 251



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 29/235 (12%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L ++ I   G T L   L  N T++SL L+GN   A G   LA+ L  N +L +LHL+
Sbjct: 37  LTLRSSDITSIGVTHLGLGLTINCTLKSLDLSGNPLSATGVANLARVLHHNSTLLKLHLN 96

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             ++GDEG++ L S L  +   L  L I NN ++A G                       
Sbjct: 97  SVNMGDEGVQTLASMLH-KNHTLDFLAISNNQLTATGL---------------------- 133

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
                   + +AL+ N ++  + L  NN+ ++G + + R++ +N  +  + +    IG  
Sbjct: 134 ------RALCEALETNTSLKFLHLSENNLGNEGGALVGRLVLNNETLRKIYMNSMGIGDS 187

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G   +   LK +  +  L +G   I     + +A+M++ N T+ I +L  N L D
Sbjct: 188 GLAIMLNALKKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLEIFELWKNSLSD 242



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 1/185 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +  EL L  + I   G+  L  GL+     L  LD+  N +SA G  ++A  + +  +
Sbjct: 31  NNNCEELTLRSSDITSIGVTHLGLGLTI-NCTLKSLDLSGNPLSATGVANLARVLHHNST 89

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           LL ++L   ++GDEG + +A  L +N T+  + +  N + + G  A+   L+ N+ +  L
Sbjct: 90  LLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAISNNQLTATGLRALCEALETNTSLKFL 149

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L+ N +G +G   +  ++  +  +  + +    IG SG   + + L+ N T+  L +  
Sbjct: 150 HLSENNLGNEGGALVGRLVLNNETLRKIYMNSMGIGDSGLAIMLNALKKNETLQKLTVGN 209

Query: 509 NGLRD 513
           N + D
Sbjct: 210 NFITD 214



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 8/211 (3%)

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           NC+ L    L  +DI   G   +   L  N T+ ++DL GN + + G + +ARVL  NS 
Sbjct: 33  NCEEL---TLRSSDITSIGVTHLGLGLTINCTLKSLDLSGNPLSATGVANLARVLHHNST 89

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L    +G +G + L+ +L  +  ++ L +   Q+ A+G   + + L  N ++  L
Sbjct: 90  LLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAISNNQLTATGLRALCEALETNTSLKFL 149

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
            L  N L +E  +    L   +    +L+ +   S+ I    G   +  + K  NE L  
Sbjct: 150 HLSENNLGNEGGALVGRLVLNNE---TLRKIYMNSMGIGD-SGLAIMLNALK-KNETLQK 204

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           + +  N I D    +IA+ ++AN+ + +  L
Sbjct: 205 LTVGNNFITDRSVQSIAEMIQANQTLEIFEL 235



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 9/204 (4%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+    I   L  N     + L  ++I S G + +   L  N  + SLDL+ NP+ A G 
Sbjct: 18  DDDMVIIGIELAVNNNCEELTLRSSDITSIGVTHLGLGLTINCTLKSLDLSGNPLSATGV 77

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
             L+ VL  +  +  L L    +G  G + +A ML  N+T+  L +  N L         
Sbjct: 78  ANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAISNNQLT------AT 131

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
           GL     A+ +   + F  L  N L      L     + NE L  I +    I D G   
Sbjct: 132 GLRALCEALETNTSLKFLHLSENNLGNEGGALVGRLVLNNETLRKIYMNSMGIGDSGLAI 191

Query: 580 IAQALKANEDVAVTSLNLANNFLT 603
           +  ALK NE   +  L + NNF+T
Sbjct: 192 MLNALKKNE--TLQKLTVGNNFIT 213


>gi|320170781|gb|EFW47680.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 452

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 140/267 (52%), Gaps = 21/267 (7%)

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           + + + +KNN+  R LEL+ +  D +   ++AEAL  N T+  + L  N  G +GA A+A
Sbjct: 12  RQLYDQVKNNTTGR-LELDGSQTDDADMQAIAEALKVNETVTHISLRNNRVGPVGAQAIA 70

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS---AKGAFHVA 380
           + L+  K++  L+L+ N++ D G++A+   L             N+S++   A GA  + 
Sbjct: 71  QVLKVTKTIAVLNLNSNTVQDAGVQAIAEALKV-----------NDSLTELFAAGAHAIG 119

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E +K   +LLW+ L  N IGD GA+ IA+AL  N  +  + L  N I + GA AIA  LK
Sbjct: 120 EALKVNNTLLWLGLDANQIGDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALK 179

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            NS +  L L  N IG  GA+A++E LK +  +  L+L + QIG  G   +A+ L+ N  
Sbjct: 180 VNSTLKKLYLEMNQIGDAGAQAVAEGLKMNQKLARLRLDYNQIGTVGVRALAEALKVNTK 239

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHS 527
           +  L L  N      C    G    H+
Sbjct: 240 LQGLWLTFN------CIDYAGTRAIHA 260



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V N    RL+L      D   +AIAE LK N  +  + L NN +   G  ++A+ L    
Sbjct: 18  VKNNTTGRLELDGSQTDDADMQAIAEALKVNETVTHISLRNNRVGPVGAQAIAQVLKVTK 77

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           TI  L+LN N     G  A+A+ L+ N SL EL   G     E ++            L 
Sbjct: 78  TIAVLNLNSNTVQDAGVQAIAEALKVNDSLTELFAAGAHAIGEALKV--------NNTLL 129

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +  N I   GA  +AE +     L  + L+ N IG+ GA+ IA+ALK N T+  + L
Sbjct: 130 WLGLDANQIGDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALKVNSTLKKLYL 189

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   GA A+A  LK N  +  L L YN IG  G +AL+E LK +  +  L L +  
Sbjct: 190 EMNQIGDAGAQAVAEGLKMNQKLARLRLDYNQIGTVGVRALAEALKVNTKLQGLWLTFNC 249

Query: 483 IGASGAEFVADMLRYNNTISILD 505
           I  +G   +  + + N  +S LD
Sbjct: 250 IDYAGTRAIHAVRQVNPNLSQLD 272



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 36/287 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++ G    D  +  +AE+L  N+T   +S   N +   G +A   VL+    +  LNL+
Sbjct: 26  LELDGSQTDDADMQAIAEALKVNETVTHISLRNNRVGPVGAQAIAQVLKVTKTIAVLNLN 85

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N + D GV+ + + L       ++  S  +L   GA AI E LK N+ L  L L+ N I
Sbjct: 86  SNTVQDAGVQAIAEAL-------KVNDSLTELFAAGAHAIGEALKVNNTLLWLGLDANQI 138

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             +G  ++AEAL  N+ ++ L L  N  G  GA A+A+ L+ N +L++L+L  N IGD G
Sbjct: 139 GDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALKVNSTLKKLYLEMNQIGDAG 198

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +A                             VAE +K  + L  + L  N IG  G   
Sbjct: 199 AQA-----------------------------VAEGLKMNQKLARLRLDYNQIGTVGVRA 229

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +A+ALK N  +  + L  N I   G  AI  V + N  ++ LD  Y 
Sbjct: 230 LAEALKVNTKLQGLWLTFNCIDYAGTRAIHAVRQVNPNLSQLDTNYQ 276



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 41/259 (15%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +   L L G+   D  ++A+   L   +  +  + + NN +   GA  +A+ +K  K+
Sbjct: 20  NNTTGRLELDGSQTDDADMQAIAEALKVNE-TVTHISLRNNRVGPVGAQAIAQVLKVTKT 78

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           +  +NL  N + D G + IA+ALK N ++T        + + GA AI   LK N+ +  L
Sbjct: 79  IAVLNLNSNTVQDAGVQAIAEALKVNDSLT-------ELFAAGAHAIGEALKVNNTLLWL 131

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L  N IG  GA+A++E L  +  +  L L   QIG +GA+ +A+ L+ N+T+  L L  
Sbjct: 132 GLDANQIGDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALKVNSTLKKLYLEM 191

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
           N + D                                 GA+ +A+  K +N+ L  + L 
Sbjct: 192 NQIGDA--------------------------------GAQAVAEGLK-MNQKLARLRLD 218

Query: 569 FNEIRDDGAFAIAQALKAN 587
           +N+I   G  A+A+ALK N
Sbjct: 219 YNQIGTVGVRALAEALKVN 237



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 7/199 (3%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +  K  +  + ++++     D G+  +AE+L  N +  E       + AAG  A  
Sbjct: 67  QAIAQVLKVTKTIAVLNLNSNTVQDAGVQAIAEALKVNDSLTE-------LFAAGAHAIG 119

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L L  N IGD G + + + L  N  ++ L L +  + + GA+AIAE LK
Sbjct: 120 EALKVNNTLLWLGLDANQIGDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALK 179

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS L+ L L  N I  +G  ++AE L  N  +  L L+ N  G +G  ALA+ L+ N  
Sbjct: 180 VNSTLKKLYLEMNQIGDAGAQAVAEGLKMNQKLARLRLDYNQIGTVGVRALAEALKVNTK 239

Query: 332 LRELHLHGNSIGDEGIRAL 350
           L+ L L  N I   G RA+
Sbjct: 240 LQGLWLTFNCIDYAGTRAI 258


>gi|320168986|gb|EFW45885.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 281

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 9/232 (3%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+AIA+ LK NS L  L L+ N I   G  +LAEAL  N+ + +LHL  N  G  GA
Sbjct: 57  DVGAQAIADALKVNSTLTWLNLSENNIGDLGAQALAEALKVNTALTTLHLGRNNIGPQGA 116

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            ALA  L+ NK+L  LHL  N I   G +A+   L   +  L  +D+ +N I A     +
Sbjct: 117 QALADALKLNKTLTALHLDSNRIETAGAQAIADALKVNQ-SLTEIDLQSNRIGAGAGQAL 175

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE +K  ++L  INL +N IG+ GAE IADALK NRT+TT+ L  N I   G  A A  L
Sbjct: 176 AEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAAAL 235

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           K     T LD++ N I  D  ++++  L+ +G+    +   C +  + A++V
Sbjct: 236 K-----TKLDVSGNQIDDDTRQSIAAALQSNGSKREFQ---CHVTLNEADWV 279



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 39/265 (14%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A GL+ N +L  L+ + +++GD G +A+   L      L  L++  N+I   GA  +AE 
Sbjct: 36  ANGLKENCTLLMLNFYRSAVGDVGAQAIADALKVNS-TLTWLNLSENNIGDLGAQALAEA 94

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K   +L  ++L  N+IG +GA+ +ADALK N+T+T + L  N I + GA AIA  LK N
Sbjct: 95  LKVNTALTTLHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQAIADALKVN 154

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +T +DL  N IGA   +AL+EVLK +  + T+ L   +IG +GAE +AD L+ N T++
Sbjct: 155 QSLTEIDLQSNRIGAGAGQALAEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVT 214

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            L L +N +                                   G +  A + K      
Sbjct: 215 TLHLWSNEITQP--------------------------------GTRAFAAALK------ 236

Query: 563 TSIDLAFNEIRDDGAFAIAQALKAN 587
           T +D++ N+I DD   +IA AL++N
Sbjct: 237 TKLDVSGNQIDDDTRQSIAAALQSN 261



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 35/256 (13%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I  K A   A  +K   +LL +N Y + +GD GA+ IADALK N T+T ++L  NNI   
Sbjct: 27  IGPKRAQDAANGLKENCTLLMLNFYRSAVGDVGAQAIADALKVNSTLTWLNLSENNIGDL 86

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A+A  LK N+ +T+L L  N IG  GA+AL++ LK +  +  L L   +I  +GA+ 
Sbjct: 87  GAQALAEALKVNTALTTLHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQA 146

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +AD L+ N +++ +DL++N     + +G                              + 
Sbjct: 147 IADALKVNQSLTEIDLQSN----RIGAGA----------------------------GQA 174

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           LA+  KV N+AL +I+L  N+I + GA AIA ALK N    VT+L+L +N +T+ G  A 
Sbjct: 175 LAEVLKV-NQALATINLNINKIGEAGAEAIADALKVNR--TVTTLHLWSNEITQPGTRAF 231

Query: 611 TDAKDLVYEMSEKEVN 626
             A     ++S  +++
Sbjct: 232 AAALKTKLDVSGNQID 247



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 120/221 (54%), Gaps = 6/221 (2%)

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A  L EN T+  L+   +  G +GA A+A  L+ N +L  L+L  N+IGD G +AL   L
Sbjct: 36  ANGLKENCTLLMLNFYRSAVGDVGAQAIADALKVNSTLTWLNLSENNIGDLGAQALAEAL 95

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
                 L  L +G N+I  +GA  +A+ +K  K+L  ++L  N I   GA+ IADALK N
Sbjct: 96  KVNTA-LTTLHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQAIADALKVN 154

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           +++T IDL  N I +    A+A VLK N  + +++L  N IG  GA+A+++ LK +  + 
Sbjct: 155 QSLTEIDLQSNRIGAGAGQALAEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVT 214

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           TL L   +I   G    A  L+     + LD+  N + D+ 
Sbjct: 215 TLHLWSNEITQPGTRAFAAALK-----TKLDVSGNQIDDDT 250



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 6/198 (3%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +A++L  N T   ++ + N I   G +A    L+ N AL TL+L  N IG +
Sbjct: 55  VGDVGAQAIADALKVNSTLTWLNLSENNIGDLGAQALAEALKVNTALTTLHLGRNNIGPQ 114

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + L D L  N  +  L L S  +   GA+AIA+ LK N  L  ++L +N I      +
Sbjct: 115 GAQALADALKLNKTLTALHLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQA 174

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAE L  N  + +++LN N  G  GA A+A  L+ N+++  LHL  N I   G RA  + 
Sbjct: 175 LAEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAAA 234

Query: 354 LSSRKGKLAVLDIGNNSI 371
           L ++      LD+  N I
Sbjct: 235 LKTK------LDVSGNQI 246



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 120/260 (46%), Gaps = 34/260 (13%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           A  L  N T   ++F  + +   G +A    L+ N  L  LNLS N IG           
Sbjct: 36  ANGLKENCTLLMLNFYRSAVGDVGAQAIADALKVNSTLTWLNLSENNIG----------- 84

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
                            D GA+A+AE LK N+ L  L L  N I   G  +LA+AL  N 
Sbjct: 85  -----------------DLGAQALAEALKVNTALTTLHLGRNNIGPQGAQALADALKLNK 127

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+ +LHL+ N     GA A+A  L+ N+SL E+ L  N IG    +AL   L   +  LA
Sbjct: 128 TLTALHLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQALAEVLKVNQA-LA 186

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            +++  N I   GA  +A+ +K  +++  ++L+ N+I   G    A ALK     T +D+
Sbjct: 187 TINLNINKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAAALK-----TKLDV 241

Query: 423 GGNNIHSKGASAIARVLKDN 442
            GN I      +IA  L+ N
Sbjct: 242 SGNQIDDDTRQSIAAALQSN 261



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 5/197 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +++S  N GD G   LAE+L  N     +    N I   G +A    L+ N  L  L
Sbjct: 73  LTWLNLSENNIGDLGAQALAEALKVNTALTTLHLGRNNIGPQGAQALADALKLNKTLTAL 132

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N I   G + + D L  N  +  + L S  +     +A+AE+LK N  L  + LN 
Sbjct: 133 HLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQALAEVLKVNQALATINLNI 192

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  ++A+AL  N T+ +LHL  N     G  A A  L+      +L + GN I 
Sbjct: 193 NKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAAALK-----TKLDVSGNQID 247

Query: 344 DEGIRALMSGLSSRKGK 360
           D+  +++ + L S   K
Sbjct: 248 DDTRQSIAAALQSNGSK 264



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 5/160 (3%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +  Q L +  K  +  +++ +        G   +A++L  NQ+  E+   +N I A   +
Sbjct: 114 QGAQALADALKLNKTLTALHLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQ 173

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   VL+ N AL T+NL+ N IG+ G + + D L  N  V  L L S ++   G +A A 
Sbjct: 174 ALAEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAA 233

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            LK       L+++ N ID     S+A AL  N + R   
Sbjct: 234 ALKTK-----LDVSGNQIDDDTRQSIAAALQSNGSKREFQ 268


>gi|320170904|gb|EFW47803.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 469

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 165/310 (53%), Gaps = 9/310 (2%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           T +L  N + D GV+ L   L  N  +  L L+   + D GA+A AE LK N+ L  L L
Sbjct: 4   TGSLGTNQMDDGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSL 63

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I ++G +++AEAL  N +++ L+L  N     GA A+A+ L+ N  L +L L  N 
Sbjct: 64  HCNQIRHAGASAIAEALKVNKSLKVLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNM 123

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG+ G + +   L  +   L +LD+  N I+A+          N K L  +NL+ N IG 
Sbjct: 124 IGNAGAQKIAEAL--KVSTLLILDLQQNQIAARAQAIAEALKVNTK-LKELNLHQNQIGV 180

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ IA+ALK N T+T++ L  N I   G  AIA  LK N+ +T L L  N IG  GA+
Sbjct: 181 VGAQAIAEALKANTTLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLNENEIGDAGAQ 240

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           A++E L  +  +  L L   QIG +GA+ +AD  + N  +  + L  N + D+VC+    
Sbjct: 241 AIAEALTVNTKLGDLFLSANQIGDAGAQAIADTFKLNPRLEYITLTKNYI-DKVCA---- 295

Query: 522 LSFFHSAIYS 531
               H+  YS
Sbjct: 296 -HAIHACTYS 304



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 142/274 (51%), Gaps = 3/274 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
              + + ++G   GD G    AE+L  N T  E+S   N I  AG  A    L+ N +LK
Sbjct: 28  HTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHCNQIRHAGASAIAEALKVNKSLK 87

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N + D+G + + + L  N G+ +L L    + + GA+ IAE LK +++L +L+L
Sbjct: 88  VLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIGNAGAQKIAEALKVSTLL-ILDL 146

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I  +   ++AEAL  N+ ++ L+L+ N  G +GA A+A+ L+ N +L  L L  N 
Sbjct: 147 QQNQI-AARAQAIAEALKVNTKLKELNLHQNQIGVVGAQAIAEALKANTTLTSLFLARNQ 205

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G +A+   L     +L VL +  N I   GA  +AE +     L  + L  N IGD
Sbjct: 206 IGDAGTQAIAEALKVNT-RLTVLHLNENEIGDAGAQAIAEALTVNTKLGDLFLSANQIGD 264

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            GA+ IAD  K N  +  I L  N I    A AI
Sbjct: 265 AGAQAIADTFKLNPRLEYITLTKNYIDKVCAHAI 298



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 161/330 (48%), Gaps = 38/330 (11%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N +D  G  +LA AL  N T+  L LNGN  G  GA A A+ L+ N +L EL LH N
Sbjct: 7   LGTNQMDDGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHCN 66

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I   G  A+   L   K  L VL++  N +   GA  +AE +K    L  + L  N IG
Sbjct: 67  QIRHAGASAIAEALKVNK-SLKVLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIG 125

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           + GA+KIA+ALK + T+  +DL   N  +  A AIA  LK N+ +  L+L  N IG  GA
Sbjct: 126 NAGAQKIAEALKVS-TLLILDLQ-QNQIAARAQAIAEALKVNTKLKELNLHQNQIGVVGA 183

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
           +A++E LK +  + +L L   QIG +G + +A+ L+ N  +++L L  N + D       
Sbjct: 184 QAIAEALKANTTLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLNENEIGDA------ 237

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
                                     GA+ +A++   VN  L  + L+ N+I D GA AI
Sbjct: 238 --------------------------GAQAIAEAL-TVNTKLGDLFLSANQIGDAGAQAI 270

Query: 581 AQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           A   K N  +    + L  N++ K    A+
Sbjct: 271 ADTFKLNPRLEY--ITLTKNYIDKVCAHAI 298



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 143/288 (49%), Gaps = 3/288 (1%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G+  LA +L  N T   +S   N I  AG +A    L+ N  L  L+L  N I   G 
Sbjct: 14  DGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHCNQIRHAGA 73

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
             + + L  N  ++ L L    L D+GA+AIAE LK N+ L  L L  NMI  +G   +A
Sbjct: 74  SAIAEALKVNKSLKVLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIGNAGAQKIA 133

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           EA L+ ST+  L L  N   A  A A+A+ L+ N  L+EL+LH N IG  G +A+   L 
Sbjct: 134 EA-LKVSTLLILDLQQNQ-IAARAQAIAEALKVNTKLKELNLHQNQIGVVGAQAIAEALK 191

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           +    L  L +  N I   G   +AE +K    L  ++L  N+IGD GA+ IA+AL  N 
Sbjct: 192 ANT-TLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLNENEIGDAGAQAIAEALTVNT 250

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            +  + L  N I   GA AIA   K N  +  + L  N I    A A+
Sbjct: 251 KLGDLFLSANQIGDAGAQAIADTFKLNPRLEYITLTKNYIDKVCAHAI 298



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 131/248 (52%), Gaps = 9/248 (3%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +G N +   G   +A  +    +L  ++L  N IGD GAE  A+ALK N T+T + L  N
Sbjct: 7   LGTNQMDDGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHCN 66

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GASAIA  LK N  +  L+L  N +  DGA+A++E LK +  +  L LG   IG 
Sbjct: 67  QIRHAGASAIAEALKVNKSLKVLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIGN 126

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
           +GA+ +A+ L+ + T+ ILDL+ N +     +    L         LK +  +   I  +
Sbjct: 127 AGAQKIAEALKVS-TLLILDLQQNQIAARAQAIAEALKVN----TKLKELNLHQNQIGVV 181

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
            GA+ +A++ K  N  LTS+ LA N+I D G  AIA+ALK N  + V  LN   N +   
Sbjct: 182 -GAQAIAEALKA-NTTLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLN--ENEIGDA 237

Query: 606 GQSALTDA 613
           G  A+ +A
Sbjct: 238 GAQAIAEA 245



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 74/146 (50%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  LK LNL  N IG  G + + + L  N  +  L L+   + D G +AIAE LK N
Sbjct: 162 LKVNTKLKELNLHQNQIGVVGAQAIAEALKANTTLTSLFLARNQIGDAGTQAIAEALKVN 221

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L VL LN N I  +G  ++AEAL  N+ +  L L+ N  G  GA A+A   + N  L 
Sbjct: 222 TRLTVLHLNENEIGDAGAQAIAEALTVNTKLGDLFLSANQIGDAGAQAIADTFKLNPRLE 281

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKG 359
            + L  N I      A+ +   S +G
Sbjct: 282 YITLTKNYIDKVCAHAIHACTYSGRG 307


>gi|46446604|ref|YP_007969.1| hypothetical protein pc0970 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400245|emb|CAF23694.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1605

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 104/186 (55%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
               DEG   ++++L  N T E +S   N I+  G +A    L SN  L+ L L+GN I D
Sbjct: 1409 QISDEGAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISD 1468

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            +G K +   L  N  +++L LS   + DEGAKAIA+ L +N+ L  L L  N I   G  
Sbjct: 1469 KGAKAIFKALAYNTVLKKLALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGME 1528

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA+AL  N+ +R L LNGN     G  ALA+ L  N +LREL L+GN I D G+ AL  
Sbjct: 1529 ALAQALASNTALRELSLNGNQISDEGMEALAQALASNTTLRELSLNGNQISDRGMEALAR 1588

Query: 353  GLSSRK 358
             L+S K
Sbjct: 1589 TLASHK 1594



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 126/276 (45%), Gaps = 29/276 (10%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             +S+  S R   D+    +A  L +N     +   +N IT  G++A    L  N A+K  
Sbjct: 1344 LNSLSFSYRIISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALAYNTAIKQF 1403

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             L  N I DEG K +   L  N   E + L    + DEGA+AIA+ L +N+ LR L LN 
Sbjct: 1404 WLDRNQISDEGAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNG 1463

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N I   G  ++ +AL  N+ ++ L L+ N     GA A+A+ L  N +L  L L  N I 
Sbjct: 1464 NQISDKGAKAIFKALAYNTVLKKLALSYNQISDEGAKAIAQALASNNTLETLSLEYNQIS 1523

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            DEG+ AL   L+S                                L  ++L  N I DEG
Sbjct: 1524 DEGMEALAQALASNTA-----------------------------LRELSLNGNQISDEG 1554

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
             E +A AL  N T+  + L GN I  +G  A+AR L
Sbjct: 1555 MEALAQALASNTTLRELSLNGNQISDRGMEALARTL 1590



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 132/251 (52%), Gaps = 1/251 (0%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            L +L+ S   I D+  + + + L  N  +  L+L+S  + D G +A+A  L  N+ ++  
Sbjct: 1344 LNSLSFSYRIISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALAYNTAIKQF 1403

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L+ N I   G  ++++AL  N+T  ++ L  N     GA A+A+ L  N +LREL L+G
Sbjct: 1404 WLDRNQISDEGAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNG 1463

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N I D+G +A+   L+     L  L +  N IS +GA  +A+ + +  +L  ++L  N I
Sbjct: 1464 NQISDKGAKAIFKALAY-NTVLKKLALSYNQISDEGAKAIAQALASNNTLETLSLEYNQI 1522

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             DEG E +A AL  N  +  + L GN I  +G  A+A+ L  N+ +  L L  N I   G
Sbjct: 1523 SDEGMEALAQALASNTALRELSLNGNQISDEGMEALAQALASNTTLRELSLNGNQISDRG 1582

Query: 460  AKALSEVLKFH 470
             +AL+  L  H
Sbjct: 1583 MEALARTLASH 1593



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 1/213 (0%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A S + ++     D G+  LA +L YN   ++     N I+  G KA    L SN   +T
Sbjct: 1371 ALSFLRLNSNQITDRGVEALAHALAYNTAIKQFWLDRNQISDEGAKAISKALTSNNTFET 1430

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            ++L  N I DEG + +   L  N  +  L L+   + D+GAKAI + L  N++L+ L L+
Sbjct: 1431 ISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKKLALS 1490

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N I   G  ++A+AL  N+T+ +L L  N     G  ALA+ L  N +LREL L+GN I
Sbjct: 1491 YNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLNGNQI 1550

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             DEG+ AL   L+S    L  L +  N IS +G
Sbjct: 1551 SDEGMEALAQALAS-NTTLRELSLNGNQISDRG 1582



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 138/321 (42%), Gaps = 62/321 (19%)

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            +L +N+S L  L  +  +I       +A  L  N+ +  L LN N     G  ALA  L 
Sbjct: 1336 QLYRNDSWLNSLSFSYRIISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALA 1395

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             N ++++  L  N I DEG +A+   L+S           NN+                 
Sbjct: 1396 YNTAIKQFWLDRNQISDEGAKAISKALTS-----------NNTFET-------------- 1430

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
                I+L  N I DEGAE IA AL  N T+  + L GN I  KGA AI + L  N+V+  
Sbjct: 1431 ----ISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKK 1486

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            L L+YN I  +GAKA+++ L  +  + TL L + QI   G E +A  L  N  +  L L 
Sbjct: 1487 LALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLN 1546

Query: 508  ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
             N + DE                                G + LAQ+    N  L  + L
Sbjct: 1547 GNQISDE--------------------------------GMEALAQAL-ASNTTLRELSL 1573

Query: 568  AFNEIRDDGAFAIAQALKANE 588
              N+I D G  A+A+ L +++
Sbjct: 1574 NGNQISDRGMEALARTLASHK 1594



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 88/170 (51%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +      DEG   +A++L  N T  E+    N I+  G KA    L  N  LK L
Sbjct: 1428 FETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKKL 1487

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             LS N I DEG K +   L  N  +E L L    + DEG +A+A+ L +N+ LR L LN 
Sbjct: 1488 ALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLNG 1547

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            N I   G  +LA+AL  N+T+R L LNGN     G  ALA+ L  +K  R
Sbjct: 1548 NQISDEGMEALAQALASNTTLRELSLNGNQISDRGMEALARTLASHKYFR 1597



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 140/330 (42%), Gaps = 66/330 (20%)

Query: 268  ELLKNNSILRVL-ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            E +K   I ++L E+  + ID      L +    +S + SL  +        A  +A GL
Sbjct: 1310 ETVKKERISKILREIKTSEIDR---IELFQLYRNDSWLNSLSFSYRIISDKKAEVIANGL 1366

Query: 327  EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
              N +L  L L+ N I D G+ AL   L+     +    +  N IS +GA  +++ + + 
Sbjct: 1367 AFNTALSFLRLNSNQITDRGVEALAHALAYNTA-IKQFWLDRNQISDEGAKAISKALTSN 1425

Query: 387  KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             +   I+L  N I DEGAE IA AL  N T+  + L GN I  KGA AI + L  N+V+ 
Sbjct: 1426 NTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLK 1485

Query: 447  SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             L L+YN I  +GAKA                            +A  L  NNT+  L L
Sbjct: 1486 KLALSYNQISDEGAKA----------------------------IAQALASNNTLETLSL 1517

Query: 507  RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSID 566
              N + DE                                G + LAQ+    N AL  + 
Sbjct: 1518 EYNQISDE--------------------------------GMEALAQAL-ASNTALRELS 1544

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
            L  N+I D+G  A+AQAL +N  +   SLN
Sbjct: 1545 LNGNQISDEGMEALAQALASNTTLRELSLN 1574



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 15/219 (6%)

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            I D+ AE IA+ L  N  ++ + L  N I  +G  A+A  L  N+ I    L  N I  +
Sbjct: 1354 ISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALAYNTAIKQFWLDRNQISDE 1413

Query: 459  GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
            GAKA+S+ L  +    T+ L + QI   GAE +A  L  N T+  L L  N + D+    
Sbjct: 1414 GAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDK---- 1469

Query: 519  CNGLSFFHSAIYSLKHMLFYSLCINYLQ----GAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                + F +  Y+    +   L ++Y Q    GAK +AQ+    N  L ++ L +N+I D
Sbjct: 1470 -GAKAIFKALAYN---TVLKKLALSYNQISDEGAKAIAQAL-ASNNTLETLSLEYNQISD 1524

Query: 575  DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +G  A+AQAL +N   A+  L+L  N ++  G  AL  A
Sbjct: 1525 EGMEALAQALASN--TALRELSLNGNQISDEGMEALAQA 1561



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 59/110 (53%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
            +S     DEG   +A++L  N T E +S   N I+  G++A    L SN AL+ L+L+GN
Sbjct: 1489 LSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLNGN 1548

Query: 229  PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             I DEG++ L   L  N  +  L L+   + D G +A+A  L ++   RV
Sbjct: 1549 QISDEGMEALAQALASNTTLRELSLNGNQISDRGMEALARTLASHKYFRV 1598


>gi|326428524|gb|EGD74094.1| hypothetical protein PTSG_05787 [Salpingoeca sp. ATCC 50818]
          Length = 238

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 119/196 (60%), Gaps = 2/196 (1%)

Query: 311 GNYG-GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           GN G G +GA A+A+ ++ N  L+EL L  NSIG EG  AL   L      L  LD+  N
Sbjct: 44  GNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVALAEMLKHNTA-LTWLDLEGN 102

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           SI  +GA  +AE +K+  +L  + L  N IGD+GA  +A+ LK N T+T ++L  N+I  
Sbjct: 103 SIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGP 162

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           +GA A+A +LK N+ +T LDL YN IG +GA AL+E+LK +  +  L L    IG  GA 
Sbjct: 163 EGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDEGAV 222

Query: 490 FVADMLRYNNTISILD 505
            +A+ML +N T+  L+
Sbjct: 223 ALAEMLEHNTTLETLE 238



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G+K     + +N   + +NL  + +GD G + + + + DN  ++ L L    +  EGA A
Sbjct: 24  GVKEEIRAIANNTCGERINLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVA 83

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE+LK+N+ L  L+L  N I   G  +LAE L  N+ ++ L+LN N  G  GA ALA+ 
Sbjct: 84  LAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEM 143

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L  L+L  NSIG EG  AL   L      L  LD+  NSI  +GA  +AE +K+
Sbjct: 144 LKHNTTLTGLNLWNNSIGPEGAVALAEMLKHNTA-LTWLDLQYNSIGPEGAVALAEMLKH 202

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             ++  + LY N IGDEGA  +A+ L+ N T+ T++
Sbjct: 203 NTTMTLLGLYNNSIGDEGAVALAEMLEHNTTLETLE 238



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 109/177 (61%), Gaps = 2/177 (1%)

Query: 339 GNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           GNS +GD G RA+   +      L  LD+ +NSI  +GA  +AE +K+  +L W++L  N
Sbjct: 44  GNSGLGDIGARAVAEAVKDNTC-LKELDLWDNSIGPEGAVALAEMLKHNTALTWLDLEGN 102

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG++GA  +A+ LK N  +  + L  N+I  KGA A+A +LK N+ +T L+L  N IG 
Sbjct: 103 SIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGP 162

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +GA AL+E+LK +  +  L L +  IG  GA  +A+ML++N T+++L L  N + DE
Sbjct: 163 EGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDE 219



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 6/198 (3%)

Query: 159 KELRAFSS------VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           +E+RA ++      +++     GD G   +AE++  N   +E+    N I   G  A   
Sbjct: 27  EEIRAIANNTCGERINLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVALAE 86

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L+ N AL  L+L GN IG++G   L ++L  N  ++ L L++  + D+GA A+AE+LK+
Sbjct: 87  MLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKH 146

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L L NN I   G  +LAE L  N+ +  L L  N  G  GA ALA+ L+ N ++
Sbjct: 147 NTTLTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTM 206

Query: 333 RELHLHGNSIGDEGIRAL 350
             L L+ NSIGDEG  AL
Sbjct: 207 TLLGLYNNSIGDEGAVAL 224



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 92/180 (51%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K+      +D+   + G EG   LAE L +N     +    N I   G  A   +L+
Sbjct: 58  EAVKDNTCLKELDLWDNSIGPEGAVALAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLK 117

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N ALK L L+ N IGD+G   L ++L  N  +  L L +  +  EGA A+AE+LK+N+ 
Sbjct: 118 HNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGPEGAVALAEMLKHNTA 177

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L+L  N I   G  +LAE L  N+T+  L L  N  G  GA ALA+ LE N +L  L
Sbjct: 178 LTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDEGAVALAEMLEHNTTLETL 237



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 110/211 (52%), Gaps = 7/211 (3%)

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G ++   A+  N     I+LG + +   GA A+A  +KDN+ +  LDL  N IG +GA 
Sbjct: 23  DGVKEEIRAIANNTCGERINLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAV 82

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           AL+E+LK +  +  L L    IG  GA  +A+ML++N  +  L L  N + D+   G   
Sbjct: 83  ALAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDK---GAVA 139

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
           L+       +L  +  ++  I   +GA  LA+  K  N ALT +DL +N I  +GA A+A
Sbjct: 140 LAEMLKHNTTLTGLNLWNNSIGP-EGAVALAEMLK-HNTALTWLDLQYNSIGPEGAVALA 197

Query: 582 QALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           + LK N    +T L L NN +   G  AL +
Sbjct: 198 EMLKHN--TTMTLLGLYNNSIGDEGAVALAE 226



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 82/159 (51%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L E  K   A + +D+ G + G++G   LAE L +N   +E+    N I   G  
Sbjct: 79  EGAVALAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAV 138

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   +L+ N  L  LNL  N IG EG   L ++L  N  +  L L    +  EGA A+AE
Sbjct: 139 ALAEMLKHNTTLTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAE 198

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           +LK+N+ + +L L NN I   G  +LAE L  N+T+ +L
Sbjct: 199 MLKHNTTMTLLGLYNNSIGDEGAVALAEMLEHNTTLETL 237



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 66/127 (51%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K   A   + ++  + GD+G   LAE L +N T   ++   N I   G  A   +
Sbjct: 112 LAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGPEGAVALAEM 171

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N AL  L+L  N IG EG   L ++L  N  +  L L +  + DEGA A+AE+L++N
Sbjct: 172 LKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDEGAVALAEMLEHN 231

Query: 274 SILRVLE 280
           + L  LE
Sbjct: 232 TTLETLE 238


>gi|326433982|gb|EGD79552.1| hypothetical protein PTSG_12997 [Salpingoeca sp. ATCC 50818]
          Length = 2282

 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 130/252 (51%), Gaps = 29/252 (11%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L D GA+A+AE LK+N+ L+ L L +N I   G  +LAE L  N+T+  L L  N  G  
Sbjct: 165 LGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLDLWRNSIGPE 224

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA ALA+ L+ N +L +L L  N IG EG  AL                           
Sbjct: 225 GAVALAEMLKHNTALEQLFLMSNRIGPEGAAAL--------------------------- 257

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
             AE +K+  +L  + L  N +GDEGA  +A+ LK N T+T +DL  N+I  KGA A+A 
Sbjct: 258 --AEMLKHNTTLEELYLNNNSMGDEGAVALAEMLKHNTTMTWLDLNNNSIGDKGAVALAE 315

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           +LK N+ +  L L  N IG +GA AL+E+LK +  +  L L    I   G   +   L  
Sbjct: 316 MLKHNTTLEELYLYNNRIGDEGAVALAEMLKHNTALEELYLDNNSITPVGGAALGAALDE 375

Query: 498 NNTISILDLRAN 509
           N T+S LD+  N
Sbjct: 376 NRTLSRLDIEKN 387



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 114/205 (55%), Gaps = 1/205 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GDEG   LAE L +N T   +    N I   G  A   +L+ N AL+ L L  N IG 
Sbjct: 192 SIGDEGAVALAEMLKHNTTLTGLDLWRNSIGPEGAVALAEMLKHNTALEQLFLMSNRIGP 251

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EG   L ++L  N  +E L L++  + DEGA A+AE+LK+N+ +  L+LNNN I   G  
Sbjct: 252 EGAAALAEMLKHNTTLEELYLNNNSMGDEGAVALAEMLKHNTTMTWLDLNNNSIGDKGAV 311

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LAE L  N+T+  L+L  N  G  GA ALA+ L+ N +L EL+L  NSI   G  AL +
Sbjct: 312 ALAEMLKHNTTLEELYLYNNRIGDEGAVALAEMLKHNTALEELYLDNNSITPVGGAALGA 371

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAF 377
            L   +  L+ LDI  NS +   AF
Sbjct: 372 ALDENR-TLSRLDIEKNSTATARAF 395



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 139/274 (50%), Gaps = 30/274 (10%)

Query: 182 LAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           +A S G N+  EEV +  A       +K     + +N   +  +L  + +GD G + + +
Sbjct: 116 IAMSGGDNRAREEVEALLAQTKVTDWVKNRIRAIANNTCGEIADLGRDGLGDIGARAVAE 175

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L DN  ++ L L    + DEGA A+AE+LK+N+ L  L+L  N I   G  +LAE L  
Sbjct: 176 ALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLDLWRNSIGPEGAVALAEMLKH 235

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+ +  L L  N  G  GA ALA+ L+ N +L EL+L+ NS+GDEG  AL   L      
Sbjct: 236 NTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNSMGDEGAVALAEMLK-HNTT 294

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-------- 412
           +  LD+ NNSI  KGA  +AE +K+  +L  + LY N IGDEGA  +A+ LK        
Sbjct: 295 MTWLDLNNNSIGDKGAVALAEMLKHNTTLEELYLYNNRIGDEGAVALAEMLKHNTALEEL 354

Query: 413 --------------------QNRTITTIDLGGNN 426
                               +NRT++ +D+  N+
Sbjct: 355 YLDNNSITPVGGAALGAALDENRTLSRLDIEKNS 388



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 1/197 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +GA A+A+ L+ N  L+ L L  NSIGDEG  AL   L      L  LD+  NSI  +
Sbjct: 166 GDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLK-HNTTLTGLDLWRNSIGPE 224

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K+  +L  + L  N IG EGA  +A+ LK N T+  + L  N++  +GA A
Sbjct: 225 GAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNSMGDEGAVA 284

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A +LK N+ +T LDL  N IG  GA AL+E+LK +  +  L L   +IG  GA  +A+M
Sbjct: 285 LAEMLKHNTTMTWLDLNNNSIGDKGAVALAEMLKHNTTLEELYLYNNRIGDEGAVALAEM 344

Query: 495 LRYNNTISILDLRANGL 511
           L++N  +  L L  N +
Sbjct: 345 LKHNTALEELYLDNNSI 361



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 130/253 (51%), Gaps = 35/253 (13%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           + D+G + +   GA  VAE +K+   L  + L+ N IGDEGA  +A+ LK N T+T +DL
Sbjct: 157 IADLGRDGLGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLDL 216

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N+I  +GA A+A +LK N+ +  L L  N IG +GA AL+E+LK +  +  L L    
Sbjct: 217 WRNSIGPEGAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNS 276

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           +G  GA  +A+ML++N T++ LDL  N + D                             
Sbjct: 277 MGDEGAVALAEMLKHNTTMTWLDLNNNSIGD----------------------------- 307

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
              +GA  LA+  K  N  L  + L  N I D+GA A+A+ LK N   A+  L L NN +
Sbjct: 308 ---KGAVALAEMLK-HNTTLEELYLYNNRIGDEGAVALAEMLKHN--TALEELYLDNNSI 361

Query: 603 TKFGQSALTDAKD 615
           T  G +AL  A D
Sbjct: 362 TPVGGAALGAALD 374



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 18/213 (8%)

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           GD  A +  +AL     +T  D   N I         R + +N+     DL  + +G  G
Sbjct: 121 GDNRAREEVEALLAQTKVT--DWVKNRI---------RAIANNTCGEIADLGRDGLGDIG 169

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
           A+A++E LK +  +  L L    IG  GA  +A+ML++N T++ LDL  N +  E   G 
Sbjct: 170 ARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLDLWRNSIGPE---GA 226

Query: 520 NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             L+       +L+ +   S  I   +GA  LA+  K  N  L  + L  N + D+GA A
Sbjct: 227 VALAEMLKHNTALEQLFLMSNRIGP-EGAAALAEMLK-HNTTLEELYLNNNSMGDEGAVA 284

Query: 580 IAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           +A+ LK N    +T L+L NN +   G  AL +
Sbjct: 285 LAEMLKHN--TTMTWLDLNNNSIGDKGAVALAE 315



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%)

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           +G  +  + ++ LC  L  +  V RL L + DL D+ A  +   +   + LRVL L++N 
Sbjct: 772 TGLTMHPDPLRVLCQRLHLSGVVTRLILVACDLDDKAAVVLGRHMHQLNHLRVLNLSHNA 831

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G  +L+E       I +L L+GN   A G   LA+ +  N+ L  + L  N + +E
Sbjct: 832 IGDVGANALSEPFFGQCCIATLGLDGNRITAAGVECLARAMVANELLSTISLVNNPVSEE 891

Query: 346 GIRALMSGLSSRKGKLA 362
           G+  +   +  ++  LA
Sbjct: 892 GVGPMAEAVVVKRRLLA 908



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 47/94 (50%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           K A  +  ++     L  +NL  N IGD GA  +++       I T+ L GN I + G  
Sbjct: 807 KAAVVLGRHMHQLNHLRVLNLSHNAIGDVGANALSEPFFGQCCIATLGLDGNRITAAGVE 866

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            +AR +  N +++++ L  NP+  +G   ++E +
Sbjct: 867 CLARAMVANELLSTISLVNNPVSEEGVGPMAEAV 900



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 37/80 (46%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+ LNLS N IGD G   L +       +  L L    +   G + +A  +  N +L  +
Sbjct: 822 LRVLNLSHNAIGDVGANALSEPFFGQCCIATLGLDGNRITAAGVECLARAMVANELLSTI 881

Query: 280 ELNNNMIDYSGFTSLAEALL 299
            L NN +   G   +AEA++
Sbjct: 882 SLVNNPVSEEGVGPMAEAVV 901


>gi|32966215|gb|AAP92144.1| leucine-rich repeat protein N5C [synthetic construct]
          Length = 358

 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 3/274 (1%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           E +    N +T AG+K    VL+SN +L+ LNLS N +GD GV+ L   L+D    +E+L
Sbjct: 42  ERLWLENNDLTEAGLKDLASVLRSNPSLRELNLSHNKLGDAGVRLLLQGLLDPGTRLEKL 101

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
            L+  DL + G K +A +L++N  LR L L+ N +  +G   L + LL+  T +  L+L 
Sbjct: 102 DLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLE 161

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N     G   LA  L  N SLREL+L  N +GD G+R L+ GL     +L  L + N  
Sbjct: 162 DNDLTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTD 221

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++  G   +A  +++  SL  ++L  N +GD G   +   L    T +  + L   ++  
Sbjct: 222 LTEAGVEDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTE 281

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            G   +A VL+ N  +  L L+ N +G  G + L
Sbjct: 282 AGMKDLASVLRSNPSLRELSLSTNKLGDAGVRLL 315



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 132/257 (51%), Gaps = 6/257 (2%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKA 209
           L + A  LR+  S+   ++S    GD G+  L + L    T  E++      +T AG+K 
Sbjct: 56  LKDLASVLRSNPSLRELNLSHNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVKD 115

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAE 268
              VL+SN +L+ L+LS N +GD GV+ L   L+D    +E+L L   DL + G K +A 
Sbjct: 116 LASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLAS 175

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLE 327
           +L++N  LR L L++N +  +G   L + LL+  T +  L L        G   LA  L 
Sbjct: 176 VLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVLR 235

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N SLREL L  N +GD G+R L+ GL     +L  L + N  ++  G   +A  +++  
Sbjct: 236 SNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGMKDLASVLRSNP 295

Query: 388 SLLWINLYMNDIGDEGA 404
           SL  ++L  N +GD G 
Sbjct: 296 SLRELSLSTNKLGDAGV 312



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 6/210 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   + +S    GD G+  L + L    T  E++    N +T AG+K    VL+SN +L+
Sbjct: 125 SLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLASVLRSNPSLR 184

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            LNLS N +GD GV+ L   L+D    +E LQL + DL + G + +A +L++N  LR L 
Sbjct: 185 ELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVLRSNPSLRELS 244

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           L+NN +  +G   L + LL+  T +  L+L        G   LA  L  N SLREL L  
Sbjct: 245 LSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGMKDLASVLRSNPSLRELSLST 304

Query: 340 NSIGDEGIRALMSGL---SSRKGKLAVLDI 366
           N +GD G+R L+ GL    +R  +L + DI
Sbjct: 305 NKLGDAGVRLLLQGLLDPGTRLEQLVLYDI 334



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 14/273 (5%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   LA  L  N SLREL+L  N +GD G+R L+ GL     +L  LD+ +  ++  G  
Sbjct: 55  GLKDLASVLRSNPSLRELNLSHNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVK 114

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
            +A  +++  SL  ++L  N +GD G   +   L    T +  + L  N++   G   +A
Sbjct: 115 DLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLA 174

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADML 495
            VL+ N  +  L+L+ N +G  G + L + L   G  +  L+L    +  +G E +A +L
Sbjct: 175 SVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVL 234

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYS----LKHMLFYSLCINYLQGAKCL 551
           R N ++  L L  N L      G  G+      +      L+ +   +  +    G K L
Sbjct: 235 RSNPSLRELSLSNNKL------GDAGVRLLLQGLLDPGTRLEKLYLRNTDLTE-AGMKDL 287

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           A   +  N +L  + L+ N++ D G   + Q L
Sbjct: 288 ASVLR-SNPSLRELSLSTNKLGDAGVRLLLQGL 319



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 118/282 (41%), Gaps = 15/282 (5%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +    + D     L+  L     +L  L + NN ++  G   +A  +++  SL  +NL
Sbjct: 15  LDIQSEELSDARWAELLPLLQQPYARLERLWLENNDLTEAGLKDLASVLRSNPSLRELNL 74

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +GD G   +   L    T +  +DL   ++   G   +A VL+ N  +  L L+ N
Sbjct: 75  SHNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVKDLASVLRSNPSLRELSLSTN 134

Query: 454 PIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            +G  G + L + L   G  +  L L    +  +G + +A +LR N ++  L+L  N L 
Sbjct: 135 KLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLASVLRSNPSLRELNLSDNKL- 193

Query: 513 DEVCSGCNGLSFFHSAIYS----LKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
                G  G+      +      L+ +   +  +    G + LA   +  N +L  + L+
Sbjct: 194 -----GDAGVRLLLQGLLDPGTRLEELQLRNTDLTE-AGVEDLASVLR-SNPSLRELSLS 246

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            N++ D G   + Q L  +    +  L L N  LT+ G   L
Sbjct: 247 NNKLGDAGVRLLLQGL-LDPGTRLEKLYLRNTDLTEAGMKDL 287


>gi|320169739|gb|EFW46638.1| hypothetical protein CAOG_04596 [Capsaspora owczarzaki ATCC 30864]
          Length = 604

 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 109/190 (57%), Gaps = 1/190 (0%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L G   G   A A+A+GL+ NK+L  L+L  N IGD G  A+   L      L  + +G 
Sbjct: 26  LKGKQIGDAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNT-TLTTVYLGE 84

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +AE +K   +L  + L+ N IGD GA+ IADALK N+T+TTI L  N I 
Sbjct: 85  NQIGDAGAQAIAEALKMNTTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIG 144

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA AIA   K N+ +T+L L  N IG  GA+A++E LK    + TL L   QIG +GA
Sbjct: 145 DDGALAIAEAFKVNTTLTTLSLQQNQIGDVGAQAIAEALKVTKTLTTLFLWQNQIGDAGA 204

Query: 489 EFVADMLRYN 498
           + +A+ L+ N
Sbjct: 205 QALAEALKAN 214



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 113/213 (53%), Gaps = 29/213 (13%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D  A AIAE LK N  L  L L+ N I  +G  ++A+AL  N+T+ +++L  N  G  GA
Sbjct: 33  DAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDAGA 92

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ N +L EL LH N IGD G +A                             +
Sbjct: 93  QAIAEALKMNTTLTELGLHQNQIGDAGAQA-----------------------------I 123

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+ +K  K++  I LY N IGD+GA  IA+A K N T+TT+ L  N I   GA AIA  L
Sbjct: 124 ADALKVNKTVTTIYLYTNQIGDDGALAIAEAFKVNTTLTTLSLQQNQIGDVGAQAIAEAL 183

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           K    +T+L L  N IG  GA+AL+E LK +G 
Sbjct: 184 KVTKTLTTLFLWQNQIGDAGAQALAEALKANGQ 216



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 113/212 (53%), Gaps = 33/212 (15%)

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE +K  K+L  +NL +N IGD G   IADALK N T+TT+ LG N I   GA AI
Sbjct: 36  ALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDAGAQAI 95

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A  LK N+ +T L L  N IG  GA+A+++ LK +  + T+ L   QIG  GA  +A+  
Sbjct: 96  AEALKMNTTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGDDGALAIAEAF 155

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           + N T++ L L+ N + D                                 GA+ +A++ 
Sbjct: 156 KVNTTLTTLSLQQNQIGDV--------------------------------GAQAIAEAL 183

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           KV  + LT++ L  N+I D GA A+A+ALKAN
Sbjct: 184 KVT-KTLTTLFLWQNQIGDAGAQALAEALKAN 214



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 104/201 (51%), Gaps = 6/201 (2%)

Query: 314 GGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           G AL A  LAK     N S     L G  IGD    A+  GL   K  L  L++  N I 
Sbjct: 6   GSALDATRLAKWFYYPNVSF----LKGKQIGDAKALAIAEGLKVNK-TLTTLNLSVNQIG 60

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             G   +A+ +K   +L  + L  N IGD GA+ IA+ALK N T+T + L  N I   GA
Sbjct: 61  DAGTIAIADALKVNTTLTTVYLGENQIGDAGAQAIAEALKMNTTLTELGLHQNQIGDAGA 120

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  LK N  +T++ L  N IG DGA A++E  K +  + TL L   QIG  GA+ +A
Sbjct: 121 QAIADALKVNKTVTTIYLYTNQIGDDGALAIAEAFKVNTTLTTLSLQQNQIGDVGAQAIA 180

Query: 493 DMLRYNNTISILDLRANGLRD 513
           + L+   T++ L L  N + D
Sbjct: 181 EALKVTKTLTTLFLWQNQIGD 201



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 112/215 (52%), Gaps = 35/215 (16%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD  A  IA+ LK N+T+TT++L  N I   G  AIA  LK N+ +T++ L  N IG  
Sbjct: 31  IGDAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDA 90

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A++E LK +  +  L L   QIG +GA+ +AD L+ N T++ + L  N + D+    
Sbjct: 91  GAQAIAEALKMNTTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGDD---- 146

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                       GA  +A++FK VN  LT++ L  N+I D GA 
Sbjct: 147 ----------------------------GALAIAEAFK-VNTTLTTLSLQQNQIGDVGAQ 177

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           AIA+ALK  +   +T+L L  N +   G  AL +A
Sbjct: 178 AIAEALKVTK--TLTTLFLWQNQIGDAGAQALAEA 210



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 96/188 (51%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G+  GD     +AE L  N+T   ++ + N I  AG  A    L+ N  L T+ L  N
Sbjct: 26  LKGKQIGDAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGEN 85

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N  +  L L    + D GA+AIA+ LK N  +  + L  N I  
Sbjct: 86  QIGDAGAQAIAEALKMNTTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGD 145

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AEA   N+T+ +L L  N  G +GA A+A+ L+  K+L  L L  N IGD G +
Sbjct: 146 DGALAIAEAFKVNTTLTTLSLQQNQIGDVGAQAIAEALKVTKTLTTLFLWQNQIGDAGAQ 205

Query: 349 ALMSGLSS 356
           AL   L +
Sbjct: 206 ALAEALKA 213



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 101/201 (50%), Gaps = 29/201 (14%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L TLNLS N IGD G   + D L  N  +  + L    + D GA+AIAE LK N
Sbjct: 43  LKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDAGAQAIAEALKMN 102

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L L+ N I  +G  ++A+AL  N T+ +++L  N  G  GA A+A+  + N +L 
Sbjct: 103 TTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGDDGALAIAEAFKVNTTLT 162

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N IGD G +A                             +AE +K  K+L  + 
Sbjct: 163 TLSLQQNQIGDVGAQA-----------------------------IAEALKVTKTLTTLF 193

Query: 394 LYMNDIGDEGAEKIADALKQN 414
           L+ N IGD GA+ +A+ALK N
Sbjct: 194 LWQNQIGDAGAQALAEALKAN 214



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 84/168 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +++++S    GD G   +A++L  N T   V    N I  AG +A    L+ N  L 
Sbjct: 47  KTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDAGAQAIAEALKMNTTLT 106

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IGD G + + D L  N  V  + L +  + D+GA AIAE  K N+ L  L L
Sbjct: 107 ELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGDDGALAIAEAFKVNTTLTTLSL 166

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
             N I   G  ++AEAL    T+ +L L  N  G  GA ALA+ L+ N
Sbjct: 167 QQNQIGDVGAQAIAEALKVTKTLTTLFLWQNQIGDAGAQALAEALKAN 214


>gi|290997674|ref|XP_002681406.1| predicted protein [Naegleria gruberi]
 gi|284095030|gb|EFC48662.1| predicted protein [Naegleria gruberi]
          Length = 426

 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 225/447 (50%), Gaps = 82/447 (18%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           +++  +S+D+ G   GDEG  F++E     +    +S   N I A G +    + Q    
Sbjct: 48  KMKQLTSLDIGGNQIGDEGAKFISEM----KQLTSLSIYNNLIGAVGFEFISEMKQ---- 99

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNS 274
           L +L++  N IGDEGVK +C         E  QL+S+ +      DEG K I+E+ +   
Sbjct: 100 LTSLDICYNEIGDEGVKSIC---------EMKQLTSLSIYNNRIGDEGVKFISEMKQ--- 147

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L++NNN I   G    A+++ E   + SL +  N  GA+GA  +++     K L  
Sbjct: 148 -LTSLDINNNRIGVQG----AKSICEMKQLTSLSIYNNQTGAVGAKFISE----MKQLTS 198

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +  N IG EG + +     S   +L  L+I  N I A+G   ++E     K L  +++
Sbjct: 199 LDISVNEIGVEGAKFI-----SEMKQLTSLNICYNRIGAEGVKLISEM----KQLTSLDI 249

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+IGDEGA+ I++     + +T++++  N I  +GA +I+ + +    +TSL    N 
Sbjct: 250 GGNEIGDEGAKFISEM----KQLTSLNICENQIGDEGAKSISEMKQ----LTSLGAYNNE 301

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG +G K +SE+ +    + +L +   QIG  GA+ +++M +    ++ LD+  N + DE
Sbjct: 302 IGVEGTKLISEMKQ----LTSLNISKNQIGDEGAKLISEMKQ----LASLDIYYNEIGDE 353

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEI 572
                 G+      I  +K +   ++  N +  +GAK +++      + LTS+D+ FNEI
Sbjct: 354 ------GVKL----ISEMKQLKSLNISKNQIGDEGAKLISEM-----KQLTSLDIHFNEI 398

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLAN 599
            D+G   I++  +      +TSL++ N
Sbjct: 399 GDEGVKLISEMKQ------LTSLSIYN 419



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 211/433 (48%), Gaps = 84/433 (19%)

Query: 220 LKTLNLSGNPIGDEGVKCLC--------DILVDNAG------VERL-QLSSVDLR----- 259
           LK+L++  N IG  G K +         DI+ +  G      + ++ QL+S+D+      
Sbjct: 4   LKSLDIGENQIGAVGAKFISEMKQLTSLDIIYNRIGAVGAKLISKMKQLTSLDIGGNQIG 63

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGAK I+E+ +    L  L + NN+I   GF  ++E       + SL +  N  G  G 
Sbjct: 64  DEGAKFISEMKQ----LTSLSIYNNLIGAVGFEFISEM----KQLTSLDICYNEIGDEGV 115

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            ++ +     K L  L ++ N IGDEG++ +     S   +L  LDI NN I  +GA  +
Sbjct: 116 KSICE----MKQLTSLSIYNNRIGDEGVKFI-----SEMKQLTSLDINNNRIGVQGAKSI 166

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E     K L  +++Y N  G  GA+ I++     + +T++D+  N I  +GA  I+ + 
Sbjct: 167 CEM----KQLTSLSIYNNQTGAVGAKFISEM----KQLTSLDISVNEIGVEGAKFISEMK 218

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           +    +TSL++ YN IGA+G K +SE+ +    + +L +G  +IG  GA+F+++M +   
Sbjct: 219 Q----LTSLNICYNRIGAEGVKLISEMKQ----LTSLDIGGNEIGDEGAKFISEMKQ--- 267

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHS--------------AIYSLKHMLFYSLCINYL 545
            ++ L++  N + DE     + +    S               I  +K +   ++  N +
Sbjct: 268 -LTSLNICENQIGDEGAKSISEMKQLTSLGAYNNEIGVEGTKLISEMKQLTSLNISKNQI 326

Query: 546 --QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
             +GAK +++      + L S+D+ +NEI D+G   I++  +      + SLN++ N + 
Sbjct: 327 GDEGAKLISEM-----KQLASLDIYYNEIGDEGVKLISEMKQ------LKSLNISKNQIG 375

Query: 604 KFGQSALTDAKDL 616
             G   +++ K L
Sbjct: 376 DEGAKLISEMKQL 388



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 143/319 (44%), Gaps = 91/319 (28%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L  LDIG N I A G    A++I   K L  +++  N IG  GA K+   +KQ   +T+
Sbjct: 3   QLKSLDIGENQIGAVG----AKFISEMKQLTSLDIIYNRIGAVGA-KLISKMKQ---LTS 54

Query: 420 IDLGGNNIHSKGASAIARVLKDNSV--------------------ITSLDLAYNPIGADG 459
           +D+GGN I  +GA  I+ + +  S+                    +TSLD+ YN IG +G
Sbjct: 55  LDIGGNQIGDEGAKFISEMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYNEIGDEG 114

Query: 460 AKALSEV-----LKFHGN---------------INTLKLGWCQIGASGAEFVADMLR--- 496
            K++ E+     L  + N               + +L +   +IG  GA+ + +M +   
Sbjct: 115 VKSICEMKQLTSLSIYNNRIGDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLTS 174

Query: 497 ---YNN--------------TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
              YNN               ++ LD+  N +      G  G  F    I  +K +   +
Sbjct: 175 LSIYNNQTGAVGAKFISEMKQLTSLDISVNEI------GVEGAKF----ISEMKQLTSLN 224

Query: 540 LCINYLQGAKCLAQSFKVVNE--ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           +C N +      A+  K+++E   LTS+D+  NEI D+GA  I++  +      +TSLN+
Sbjct: 225 ICYNRIG-----AEGVKLISEMKQLTSLDIGGNEIGDEGAKFISEMKQ------LTSLNI 273

Query: 598 ANNFLTKFGQSALTDAKDL 616
             N +   G  ++++ K L
Sbjct: 274 CENQIGDEGAKSISEMKQL 292


>gi|320162653|gb|EFW39552.1| hypothetical protein CAOG_00077 [Capsaspora owczarzaki ATCC 30864]
          Length = 398

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 135/277 (48%), Gaps = 29/277 (10%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V N  +  L L    + D GA+ IAE LK N  +  L L  N I + G  ++AEA+  N+
Sbjct: 12  VKNNAIGLLSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNT 71

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+  L LN N+ G LGA A+A+ L  NK L++L L  N IGD G RA             
Sbjct: 72  TLTQLSLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRA------------- 118

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
                           +AE +K  K+L  ++L  N IG++GA+ +A+AL+ N T+T +DL
Sbjct: 119 ----------------IAEALKVNKTLTSLSLERNQIGNDGAQSLAEALRVNTTVTRLDL 162

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   GA A+A  LK+N+ +T L+L +N IG  G +A+ +    +  +   +    Q
Sbjct: 163 EQNQIGDAGARALAEALKENTTLTLLELNHNAIGDAGMEAVYDAWDVNATVEDTRFENPQ 222

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
           I       +       ++ ++  L   GL  E  S C
Sbjct: 223 ISPLALAMIPRFTTAEDSQTVFGLLTRGLELENQSAC 259



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 35/225 (15%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L+   IGD GAE IA+ALK+N+ +  + LG N I   G  AIA  ++ N+ +T L L 
Sbjct: 20  LSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSLN 79

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N  G  GA+A++E L  +  +  L LG  QIG +G   +A+ L+ N T++ L L  N +
Sbjct: 80  ANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLERNQI 139

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            ++                                GA+ LA++ +V N  +T +DL  N+
Sbjct: 140 GND--------------------------------GAQSLAEALRV-NTTVTRLDLEQNQ 166

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           I D GA A+A+ALK  E+  +T L L +N +   G  A+ DA D+
Sbjct: 167 IGDAGARALAEALK--ENTTLTLLELNHNAIGDAGMEAVYDAWDV 209



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 93/178 (52%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  NQ   ++    N I   G  A    ++ N  L  L+L+ N  GD
Sbjct: 26  QIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSLNANHTGD 85

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + LV N  +++L L    + D G +AIAE LK N  L  L L  N I   G  
Sbjct: 86  LGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLERNQIGNDGAQ 145

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           SLAEAL  N+T+  L L  N  G  GA ALA+ L+ N +L  L L+ N+IGD G+ A+
Sbjct: 146 SLAEALRVNTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELNHNAIGDAGMEAV 203



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 102/201 (50%), Gaps = 1/201 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N A+  L+L    IGD G + + + L +N  V +L L    +   G  AIAE ++ N+ L
Sbjct: 14  NNAIGLLSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTL 73

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L LN N     G  ++AEAL+ N  ++ L L  N  G  G  A+A+ L+ NK+L  L 
Sbjct: 74  TQLSLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLS 133

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IG++G ++L   L      +  LD+  N I   GA  +AE +K   +L  + L  
Sbjct: 134 LERNQIGNDGAQSLAEALRV-NTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELNH 192

Query: 397 NDIGDEGAEKIADALKQNRTI 417
           N IGD G E + DA   N T+
Sbjct: 193 NAIGDAGMEAVYDAWDVNATV 213



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 98/205 (47%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
           LLS +  ++     +T+ E  KE +    + +     G  G   +AE++  N T  ++S 
Sbjct: 19  LLSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSL 78

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
            AN     G +A    L  N  L+ L L  N IGD G + + + L  N  +  L L    
Sbjct: 79  NANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLERNQ 138

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + ++GA+++AE L+ N+ +  L+L  N I  +G  +LAEAL EN+T+  L LN N  G  
Sbjct: 139 IGNDGAQSLAEALRVNTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELNHNAIGDA 198

Query: 318 GANALAKGLEGNKSLRELHLHGNSI 342
           G  A+    + N ++ +       I
Sbjct: 199 GMEAVYDAWDVNATVEDTRFENPQI 223


>gi|260841272|ref|XP_002613852.1| hypothetical protein BRAFLDRAFT_277514 [Branchiostoma floridae]
 gi|229299242|gb|EEN69861.1| hypothetical protein BRAFLDRAFT_277514 [Branchiostoma floridae]
          Length = 410

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 162/326 (49%), Gaps = 12/326 (3%)

Query: 208 KAFDGVLQSNIALKTLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           KA +  L       TL+L+GN        + D  +  LC  L ++  V RL L   ++ D
Sbjct: 32  KAHEDYLSEPSDEMTLDLAGNNKLLTDTRLEDRDMVPLCQTLANSTYVSRLDLRYNNITD 91

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           EGAK + +L++ +  LR L +  N I   G   +A  L  N T+  L +NGN  G  G  
Sbjct: 92  EGAKHLGKLIEVSVSLRFLNVMCNDIGPDGAEHIARGLHTNETLTELKVNGNKIGNKGGM 151

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI---SAKGAF 377
             A  L+ N  + +L L    +G E + AL + L   K  L  L++    +     +   
Sbjct: 152 MFASALQINTGVEQLDLGDADLGTESVIALATILHYNKF-LKALNVNRPLLFTHQEETTV 210

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           H+A  +K   +L  I+L   D+ D GAE++ + L++N  ++ +DL  N +   GA  +++
Sbjct: 211 HMANMLKVNTTLREIHLQKYDMRDFGAERLVETLQENIALSYLDLSCNRVTRDGAKHLSK 270

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLR 496
           +LK N+ +  LDL +N I  DGA  LSE LK F+ N++TL L    I  +G   VAD ++
Sbjct: 271 LLKKNTPLQVLDLGFNRIEDDGAIYLSEALKHFNTNLHTLVLTHNCIRGNGLVAVADAMK 330

Query: 497 YNNTISILDLRANGLRDEVCSGCNGL 522
            N+T+  + +  N L +  C   N L
Sbjct: 331 TNSTLYSVFIWGNELEESACVAFNDL 356



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 140/306 (45%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S +D+   N  DEG   L + +  + +   ++   N I   G +     L +N  L  L 
Sbjct: 80  SRLDLRYNNITDEGAKHLGKLIEVSVSLRFLNVMCNDIGPDGAEHIARGLHTNETLTELK 139

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           ++GN IG++G       L  N GVE+L L   DL  E   A+A +L  N  L+ L +N  
Sbjct: 140 VNGNKIGNKGGMMFASALQINTGVEQLDLGDADLGTESVIALATILHYNKFLKALNVNRP 199

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++          +A  L  N+T+R +HL        GA  L + L+ N +L  L L  N 
Sbjct: 200 LLFTHQEETTVHMANMLKVNTTLREIHLQKYDMRDFGAERLVETLQENIALSYLDLSCNR 259

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIG 400
           +  +G + L S L  +   L VLD+G N I   GA +++E +K+  + L  + L  N I 
Sbjct: 260 VTRDGAKHL-SKLLKKNTPLQVLDLGFNRIEDDGAIYLSEALKHFNTNLHTLVLTHNCIR 318

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             G   +ADA+K N T+ ++ + GN +      A   +++   + T       P   DG 
Sbjct: 319 GNGLVAVADAMKTNSTLYSVFIWGNELEESACVAFNDLIESARLDTE-QTDVQPYVVDGR 377

Query: 461 KALSEV 466
             LSE+
Sbjct: 378 VYLSEL 383



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 129/255 (50%), Gaps = 13/255 (5%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N+I+ +GA H+ + I+   SL ++N+  NDIG +GAE IA  L  N T+T + + 
Sbjct: 82  LDLRYNNITDEGAKHLGKLIEVSVSLRFLNVMCNDIGPDGAEHIARGLHTNETLTELKVN 141

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A  L+ N+ +  LDL    +G +   AL+ +L ++  +  L +    +
Sbjct: 142 GNKIGNKGGMMFASALQINTGVEQLDLGDADLGTESVIALATILHYNKFLKALNVNRPLL 201

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
                E    +A+ML+ N T+  + L+   +RD       G       +     + +  L
Sbjct: 202 FTHQEETTVHMANMLKVNTTLREIHLQKYDMRD------FGAERLVETLQENIALSYLDL 255

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
             N +   GAK L++  K  N  L  +DL FN I DDGA  +++ALK + +  + +L L 
Sbjct: 256 SCNRVTRDGAKHLSKLLK-KNTPLQVLDLGFNRIEDDGAIYLSEALK-HFNTNLHTLVLT 313

Query: 599 NNFLTKFGQSALTDA 613
           +N +   G  A+ DA
Sbjct: 314 HNCIRGNGLVAVADA 328


>gi|403371680|gb|EJY85722.1| hypothetical protein OXYTRI_16292 [Oxytricha trifallax]
          Length = 688

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 191/392 (48%), Gaps = 35/392 (8%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G +  K L DI++ +  +  + LS   + DEGAK  AELL   + L  L+L++N I  +
Sbjct: 63  LGIQMCKVLSDIVLKSDRIVEINLSRNKVGDEGAKIFAELLIKTNRLVKLDLSSNEISRN 122

Query: 290 GFTSLAEALLENSTIRSLH------LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           G   ++EAL+ N+++  L       L+ N+ G  G+ +LAK L+ NK L  L + GN +G
Sbjct: 123 GAKIISEALVLNNSLYHLSFFSYEGLHSNFIGEEGSKSLAKMLQQNKILSMLDVGGNKLG 182

Query: 344 DEGIRAL-MSGLSSRKGKLAVLDIGNNSISAKGA-FHVAEYIKNCKSLLWINLYMNDIGD 401
           + G+  L M+   S +  L  L+I NN I+ +G  + +   IK+   L+ +++  + IG 
Sbjct: 183 NNGLSYLSMTIQESSQSSLIYLNISNNDITQEGCQYFLKSLIKS--HLIELDMSKSLIGL 240

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GA++  + LK N  +  + L    I  +G   I   LK N  +T L+L+ N        
Sbjct: 241 KGAQQFGEVLKLNHFLQKLSLSQCEIGPRGLQDIMNGLKRNKSLTHLNLSRNDFQFSLPN 300

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           +LS +   +  +  L L +C++G+     + D L  N  I  L LR N + D        
Sbjct: 301 SLSSMFMINSTLQVLDLSFCRLGSQMMLGITDGLFLNKQIKKLLLRDNQIEDH------- 353

Query: 522 LSFFHSAIYSLKHMLFYSLC-INYLQ---------GAKCLAQSFKVVNEALTSIDLAFNE 571
                  I  L H+L    C I +L          G   LAQ     N +L  ++L  N 
Sbjct: 354 ------PIEILSHILLNPQCTITHLDLSQNFITDFGGVALAQCLS-FNTSLQYLNLKLNY 406

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
           ++D+ A  + Q+++  ++  +  +NL NNF++
Sbjct: 407 LQDETAQQMLQSIRG-QNKHIKKMNLKNNFIS 437



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 149/312 (47%), Gaps = 42/312 (13%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E++L  N +GDEG + + + L  +  +L  LD+ +N IS  GA  ++E +    SL  ++
Sbjct: 83  EINLSRNKVGDEGAK-IFAELLIKTNRLVKLDLSSNEISRNGAKIISEALVLNNSLYHLS 141

Query: 394 ------LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV--- 444
                 L+ N IG+EG++ +A  L+QN+ ++ +D+GGN + + G S ++  ++++S    
Sbjct: 142 FFSYEGLHSNFIGEEGSKSLAKMLQQNKILSMLDVGGNKLGNNGLSYLSMTIQESSQSSL 201

Query: 445 --------------------------ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
                                     +  LD++ + IG  GA+   EVLK +  +  L L
Sbjct: 202 IYLNISNNDITQEGCQYFLKSLIKSHLIELDMSKSLIGLKGAQQFGEVLKLNHFLQKLSL 261

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
             C+IG  G + + + L+ N +++ L+L  N  +  + +  + +   +S +     +L  
Sbjct: 262 SQCEIGPRGLQDIMNGLKRNKSLTHLNLSRNDFQFSLPNSLSSMFMINSTL----QVLDL 317

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
           S C    Q    +      +N+ +  + L  N+I +D    I   +  N    +T L+L+
Sbjct: 318 SFCRLGSQMMLGITDGL-FLNKQIKKLLLRDNQI-EDHPIEILSHILLNPQCTITHLDLS 375

Query: 599 NNFLTKFGQSAL 610
            NF+T FG  AL
Sbjct: 376 QNFITDFGGVAL 387



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 156/310 (50%), Gaps = 9/310 (2%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-- 195
           L S F G+   E  ++L +  ++ +  S +D+ G   G+ GL +L+ ++  +  +  +  
Sbjct: 148 LHSNFIGE---EGSKSLAKMLQQNKILSMLDVGGNKLGNNGLSYLSMTIQESSQSSLIYL 204

Query: 196 SFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           + + N IT  G + F   +++S++    L++S + IG +G +   ++L  N  +++L LS
Sbjct: 205 NISNNDITQEGCQYFLKSLIKSHLI--ELDMSKSLIGLKGAQQFGEVLKLNHFLQKLSLS 262

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
             ++   G + I   LK N  L  L L+ N   +S   SL+   + NST++ L L+    
Sbjct: 263 QCEIGPRGLQDIMNGLKRNKSLTHLNLSRNDFQFSLPNSLSSMFMINSTLQVLDLSFCRL 322

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G+     +  GL  NK +++L L  N I D  I  L   L + +  +  LD+  N I+  
Sbjct: 323 GSQMMLGITDGLFLNKQIKKLLLRDNQIEDHPIEILSHILLNPQCTITHLDLSQNFITDF 382

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGAS 433
           G   +A+ +    SL ++NL +N + DE A+++  +++ QN+ I  ++L  N I  +   
Sbjct: 383 GGVALAQCLSFNTSLQYLNLKLNYLQDETAQQMLQSIRGQNKHIKKMNLKNNFISLRFIG 442

Query: 434 AIARVLKDNS 443
            I  +LK N 
Sbjct: 443 MIEELLKQNQ 452



 Score = 45.4 bits (106), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 15/160 (9%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G    K LS+++     I  + L   ++G  GA+  A++L   N +  LDL +N +   
Sbjct: 63  LGIQMCKVLSDIVLKSDRIVEINLSRNKVGDEGAKIFAELLIKTNRLVKLDLSSNEI--- 119

Query: 515 VCSGCNGLSFFHSAIY---SLKHMLFYS---LCINYL--QGAKCLAQSFKVVNEALTSID 566
                NG      A+    SL H+ F+S   L  N++  +G+K LA+  +  N+ L+ +D
Sbjct: 120 ---SRNGAKIISEALVLNNSLYHLSFFSYEGLHSNFIGEEGSKSLAKMLQQ-NKILSMLD 175

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           +  N++ ++G   ++  ++ +   ++  LN++NN +T+ G
Sbjct: 176 VGGNKLGNNGLSYLSMTIQESSQSSLIYLNISNNDITQEG 215


>gi|290979790|ref|XP_002672616.1| predicted protein [Naegleria gruberi]
 gi|284086194|gb|EFC39872.1| predicted protein [Naegleria gruberi]
          Length = 559

 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 237/498 (47%), Gaps = 104/498 (20%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+ ++    GDEG+ F++E     +    +    N I   G  +   + Q
Sbjct: 117 KFISEMKQLTSLGIAENRIGDEGVKFISEM----KQLTLLDICCNEIGVEGATSISEMKQ 172

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDI-------LVDN--------AGVERLQLSSVDLRD 260
               L +LN+SGN IGDEG K + ++       + DN        +  E  QL+S+ + D
Sbjct: 173 ----LTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSISD 228

Query: 261 E-----GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
                 GAK I+E+ +    L +L ++NN I   G    A+ + E   + SL ++ N   
Sbjct: 229 NEIGVVGAKLISEMNQ----LTLLNISNNEIGDEG----AKFISEMKQLISLDISNNLID 280

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ++++     K L  L ++ N IGDEG++ +     S+  +L  LDI  N I   G
Sbjct: 281 IEGAKSISEM----KQLTSLEIYYNEIGDEGVKFI-----SKMEQLTSLDISGNQIGVGG 331

Query: 376 AFHVAEY--------------------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           A  ++E                     I   K L  +N+Y N IGDEG + I++      
Sbjct: 332 AKSISEMKQLTFLQIFSNRIGDEGANSISEMKQLTSLNIYYNQIGDEGVKFISEM----E 387

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
            +T++D+GGN I   GA +I+ + +    +T L +  N IG +G K +SE+ +    + +
Sbjct: 388 QLTSLDIGGNQIGVGGAKSISEMKQ----LTFLQIFSNRIGDEGVKFISEMKQ----LTS 439

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHM 535
           L +   +IG  GA+ +++M      +++L + +N + DE      G+ F    I  +K +
Sbjct: 440 LNISGNRIGDEGAKSISEM----KQLTLLYISSNEIGDE------GVKF----ISEMKQL 485

Query: 536 LFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 593
               +  N +  +G K +++      + LTS++++ N I D+G  +I++  +      +T
Sbjct: 486 TLLQIYSNRIGDEGVKSISEM-----KQLTSLNISGNRIGDEGVKSISEMKQ------LT 534

Query: 594 SLNLANNFLTKFGQSALT 611
           SLN++NN +   G   LT
Sbjct: 535 SLNISNNRIGDEGVKLLT 552



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 157/332 (47%), Gaps = 68/332 (20%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           AK +   K L  L +  N IGDEG++ +     S   +L +LDI  N I  +GA  ++E 
Sbjct: 116 AKFISEMKQLTSLGIAENRIGDEGVKFI-----SEMKQLTLLDICCNEIGVEGATSISEM 170

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               K L  +N+  N IGDEGA+ I++     + +T +++  N I  +GA +I+ + +  
Sbjct: 171 ----KQLTSLNISGNRIGDEGAKLISEM----KQLTLLNIADNRICVEGAKSISEMKQ-- 220

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY----- 497
             +TSL ++ N IG  GAK +SE+      +  L +   +IG  GA+F+++M +      
Sbjct: 221 --LTSLSISDNEIGVVGAKLISEM----NQLTLLNISNNEIGDEGAKFISEMKQLISLDI 274

Query: 498 -NNTISI--------------LDLRANGLRDEVCSGCNGLSFFHS--------------A 528
            NN I I              L++  N + DE     + +    S              +
Sbjct: 275 SNNLIDIEGAKSISEMKQLTSLEIYYNEIGDEGVKFISKMEQLTSLDISGNQIGVGGAKS 334

Query: 529 IYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           I  +K + F  +  N +  +GA  +++      + LTS+++ +N+I D+G   I++  + 
Sbjct: 335 ISEMKQLTFLQIFSNRIGDEGANSISEM-----KQLTSLNIYYNQIGDEGVKFISEMEQ- 388

Query: 587 NEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 618
                +TSL++  N +   G  ++++ K L +
Sbjct: 389 -----LTSLDIGGNQIGVGGAKSISEMKQLTF 415



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 28/134 (20%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAE----SLGY---NQTAEE-------------V 195
           +F  E++  +S+++SG   GDEG   ++E    +L Y   N+  +E             +
Sbjct: 429 KFISEMKQLTSLNISGNRIGDEGAKSISEMKQLTLLYISSNEIGDEGVKFISEMKQLTLL 488

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
              +N I   G+K+   + Q    L +LN+SGN IGDEGVK + ++      +  L +S+
Sbjct: 489 QIYSNRIGDEGVKSISEMKQ----LTSLNISGNRIGDEGVKSISEM----KQLTSLNISN 540

Query: 256 VDLRDEGAKAIAEL 269
             + DEG K +  L
Sbjct: 541 NRIGDEGVKLLTSL 554


>gi|395861105|ref|XP_003802834.1| PREDICTED: ribonuclease inhibitor [Otolemur garnettii]
          Length = 487

 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 174/357 (48%), Gaps = 5/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +D+     GD G+  + ++L G   T +++S     +T AG      +L+S  +L+
Sbjct: 83  ALTELDLRTNELGDAGVRLVLQALQGPTCTIQKLSLQNCCLTEAGCGVLPSMLRSVPSLR 142

Query: 222 TLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G+K LC+ +L     +E+LQL   +L     + +A +L+     + L 
Sbjct: 143 ELHLSDNPLGDAGLKLLCEGLLNPQCHLEKLQLEYCNLTAASCEFLASVLRAKPDFKELI 202

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G  +L + L +++  + +L L      A     L   +    SL+ L L  
Sbjct: 203 VSNNDLSEAGVRTLCQGLKDSACPLEALKLENCGVTAANCRDLCSAVASKTSLQALDLGS 262

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L +    I+A+G   +   + + +SL  ++L  N++
Sbjct: 263 NRLGDAGLTELCQGLLRPSFRLRTLWLWECGITAEGCHELCRMLCSLESLRELSLAGNEL 322

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GD GA+ + ++ L     + ++ +   ++ +      + VL  N  +  L ++ NP+G  
Sbjct: 323 GDAGAQLLCESLLAPGCRLESLWVKTCSLTAACCPLFSSVLAQNKCLLELQMSSNPLGDV 382

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           G + L + L   G +   L LG C +   G   +A  L  N+++  LDL  N + DE
Sbjct: 383 GVQTLCQGLGQPGTVLRVLWLGDCDVSDVGCSSLASTLLANHSLRELDLSNNRMGDE 439



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 184/430 (42%), Gaps = 13/430 (3%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           L +  S+D+      D       E L   Q  + V     G+T    +     L++N AL
Sbjct: 28  LSSTMSLDIQCEQLSDT---RWTELLPLIQQCQVVRLDDCGLTEVRCQDMSSALRANPAL 84

Query: 221 KTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+L  N +GD GV+ +   L      +++L L +  L + G   +  +L++   LR L
Sbjct: 85  TELDLRTNELGDAGVRLVLQALQGPTCTIQKLSLQNCCLTEAGCGVLPSMLRSVPSLREL 144

Query: 280 ELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L++N +  +G   L E LL     +  L L      A     LA  L      +EL + 
Sbjct: 145 HLSDNPLGDAGLKLLCEGLLNPQCHLEKLQLEYCNLTAASCEFLASVLRAKPDFKELIVS 204

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N + + G+R L  GL      L  L + N  ++A     +   + +  SL  ++L  N 
Sbjct: 205 NNDLSEAGVRTLCQGLKDSACPLEALKLENCGVTAANCRDLCSAVASKTSLQALDLGSNR 264

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +GD G  ++    L+ +  + T+ L    I ++G   + R+L     +  L LA N +G 
Sbjct: 265 LGDAGLTELCQGLLRPSFRLRTLWLWECGITAEGCHELCRMLCSLESLRELSLAGNELGD 324

Query: 458 DGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-V 515
            GA+ L E L   G  + +L +  C + A+     + +L  N  +  L + +N L D  V
Sbjct: 325 AGAQLLCESLLAPGCRLESLWVKTCSLTAACCPLFSSVLAQNKCLLELQMSSNPLGDVGV 384

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
            + C GL    + +     +L+   C     G   LA +  + N +L  +DL+ N + D+
Sbjct: 385 QTLCQGLGQPGTVL----RVLWLGDCDVSDVGCSSLASTL-LANHSLRELDLSNNRMGDE 439

Query: 576 GAFAIAQALK 585
           G   +  +L+
Sbjct: 440 GVRQLMGSLR 449



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 6/263 (2%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDG 212
            A  LRA   F  + +S  +  + G+  L + L  +    E +     G+TAA  +    
Sbjct: 188 LASVLRAKPDFKELIVSNNDLSEAGVRTLCQGLKDSACPLEALKLENCGVTAANCRDLCS 247

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            + S  +L+ L+L  N +GD G+  LC  +L  +  +  L L    +  EG   +  +L 
Sbjct: 248 AVASKTSLQALDLGSNRLGDAGLTELCQGLLRPSFRLRTLWLWECGITAEGCHELCRMLC 307

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +   LR L L  N +  +G   L E+LL     + SL +      A      +  L  NK
Sbjct: 308 SLESLRELSLAGNELGDAGAQLLCESLLAPGCRLESLWVKTCSLTAACCPLFSSVLAQNK 367

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L EL +  N +GD G++ L  GL      L VL +G+  +S  G   +A  +    SL 
Sbjct: 368 CLLELQMSSNPLGDVGVQTLCQGLGQPGTVLRVLWLGDCDVSDVGCSSLASTLLANHSLR 427

Query: 391 WINLYMNDIGDEGAEKIADALKQ 413
            ++L  N +GDEG  ++  +L+Q
Sbjct: 428 ELDLSNNRMGDEGVRQLMGSLRQ 450



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 162/405 (40%), Gaps = 39/405 (9%)

Query: 239 CDILVDNAGVERL----QLSSVDLRDEG-----AKAIAELLKNNSILRVLELNNNMIDYS 289
           C+ L D    E L    Q   V L D G      + ++  L+ N  L  L+L  N +  +
Sbjct: 38  CEQLSDTRWTELLPLIQQCQVVRLDDCGLTEVRCQDMSSALRANPALTELDLRTNELGDA 97

Query: 290 GFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           G   + +AL     TI+ L L        G   L   L    SLRELHL  N +GD G++
Sbjct: 98  GVRLVLQALQGPTCTIQKLSLQNCCLTEAGCGVLPSMLRSVPSLRELHLSDNPLGDAGLK 157

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L  GL + +  L  L +   +++A     +A  ++       + +  ND+ + G   + 
Sbjct: 158 LLCEGLLNPQCHLEKLQLEYCNLTAASCEFLASVLRAKPDFKELIVSNNDLSEAGVRTLC 217

Query: 409 DALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-V 466
             LK +   +  + L    + +     +   +   + + +LDL  N +G  G   L + +
Sbjct: 218 QGLKDSACPLEALKLENCGVTAANCRDLCSAVASKTSLQALDLGSNRLGDAGLTELCQGL 277

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE----VC-----S 517
           L+    + TL L  C I A G   +  ML    ++  L L  N L D     +C      
Sbjct: 278 LRPSFRLRTLWLWECGITAEGCHELCRMLCSLESLRELSLAGNELGDAGAQLLCESLLAP 337

Query: 518 GCNGLSFF--HSAIYSLKHMLFYSL-----CINYLQ---------GAKCLAQSFKVVNEA 561
           GC   S +    ++ +    LF S+     C+  LQ         G + L Q        
Sbjct: 338 GCRLESLWVKTCSLTAACCPLFSSVLAQNKCLLELQMSSNPLGDVGVQTLCQGLGQPGTV 397

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           L  + L   ++ D G  ++A  L AN   ++  L+L+NN +   G
Sbjct: 398 LRVLWLGDCDVSDVGCSSLASTLLANH--SLRELDLSNNRMGDEG 440


>gi|334327902|ref|XP_001371709.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 3
           [Monodelphis domestica]
          Length = 1011

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 164/327 (50%), Gaps = 11/327 (3%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQL 253
           ++ +   +TA+  +    +L++N  L  L+LS N +GDEG+K LC++L + N  ++ L L
Sbjct: 640 IALSKCQLTASCCQHLSSLLKNNKNLTYLDLSMNFLGDEGIKALCEVLRNQNCNIQELNL 699

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGN 312
           S     D   K ++  L  +  + +L+L+ N +   G   L EAL   +  ++ L L+  
Sbjct: 700 SRCRFSDACCKNLSSALMAHGNINILDLSENTLADVGMNLLCEALGSSDCNLQELKLSQC 759

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           +        L+  ++ N+SL  L + GN + D GIR L   L      L  L +    I+
Sbjct: 760 HFTDACCQDLSTCIK-NQSLIHLDVSGNFLQDSGIRLLCEALRHPTCNLQKLLLSLCHIT 818

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKG 431
                 V+  +KN +SL+ ++L  N++ + G + + +AL+ QN  + T++L    + +  
Sbjct: 819 DSSCQDVSFALKNNRSLIHLDLGCNNLYNHGVKLLCEALENQNCNLQTLELWNCQLSAAC 878

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT----LKLGWCQIGASG 487
               + VLK N  +T L+L  NP+  +G K L E L   GN N     LKL  C + A G
Sbjct: 879 CHEFSSVLKKNQSLTHLNLGANPLRNNGVKVLCEAL---GNQNCKLQKLKLCKCLLSAVG 935

Query: 488 AEFVADMLRYNNTISILDLRANGLRDE 514
             +++  L+ N  ++ L L  NGL D+
Sbjct: 936 CRYLSTALKSNQNLTHLKLTGNGLGDD 962



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 154/321 (47%), Gaps = 5/321 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAF 210
           Q L+   K  +  + +D+S    GDEG+  L E L   N   +E++ +    + A  K  
Sbjct: 653 QHLSSLLKNNKNLTYLDLSMNFLGDEGIKALCEVLRNQNCNIQELNLSRCRFSDACCKNL 712

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAEL 269
              L ++  +  L+LS N + D G+  LC+ L   +  ++ L+LS     D   + ++  
Sbjct: 713 SSALMAHGNINILDLSENTLADVGMNLLCEALGSSDCNLQELKLSQCHFTDACCQDLSTC 772

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEG 328
           +KN S++  L+++ N +  SG   L EAL   +  ++ L L+  +        ++  L+ 
Sbjct: 773 IKNQSLIH-LDVSGNFLQDSGIRLLCEALRHPTCNLQKLLLSLCHITDSSCQDVSFALKN 831

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N+SL  L L  N++ + G++ L   L ++   L  L++ N  +SA      +  +K  +S
Sbjct: 832 NRSLIHLDLGCNNLYNHGVKLLCEALENQNCNLQTLELWNCQLSAACCHEFSSVLKKNQS 891

Query: 389 LLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L  +NL  N + + G + + +AL  QN  +  + L    + + G   ++  LK N  +T 
Sbjct: 892 LTHLNLGANPLRNNGVKVLCEALGNQNCKLQKLKLCKCLLSAVGCRYLSTALKSNQNLTH 951

Query: 448 LDLAYNPIGADGAKALSEVLK 468
           L L  N +G DG K L E LK
Sbjct: 952 LKLTGNGLGDDGVKLLFEALK 972



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 164/371 (44%), Gaps = 17/371 (4%)

Query: 238 LCDILVDNAGVERLQ--LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
            C     N G  RL   LS   L     + ++ LLKNN  L  L+L+ N +   G  +L 
Sbjct: 625 FCIKFCHNLGKIRLNIALSKCQLTASCCQHLSSLLKNNKNLTYLDLSMNFLGDEGIKALC 684

Query: 296 EALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           E L  +N  I+ L+L+           L+  L  + ++  L L  N++ D G+  L   L
Sbjct: 685 EVLRNQNCNIQELNLSRCRFSDACCKNLSSALMAHGNINILDLSENTLADVGMNLLCEAL 744

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
            S    L  L +     +      ++  IKN +SL+ +++  N + D G   + +AL+  
Sbjct: 745 GSSDCNLQELKLSQCHFTDACCQDLSTCIKN-QSLIHLDVSGNFLQDSGIRLLCEALRHP 803

Query: 415 RT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-N 472
              +  + L   +I       ++  LK+N  +  LDL  N +   G K L E L+    N
Sbjct: 804 TCNLQKLLLSLCHITDSSCQDVSFALKNNRSLIHLDLGCNNLYNHGVKLLCEALENQNCN 863

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYS 531
           + TL+L  CQ+ A+     + +L+ N +++ L+L AN LR+  V   C  L   +  +  
Sbjct: 864 LQTLELWNCQLSAACCHEFSSVLKKNQSLTHLNLGANPLRNNGVKVLCEALGNQNCKLQK 923

Query: 532 LKHMLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 589
           LK      LC   L    C  L+ + K  N+ LT + L  N + DDG   + +ALK N D
Sbjct: 924 LK------LCKCLLSAVGCRYLSTALK-SNQNLTHLKLTGNGLGDDGVKLLFEALK-NSD 975

Query: 590 VAVTSLNLANN 600
             +  L    N
Sbjct: 976 CKLQKLTHNKN 986



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 3/220 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+SG    D G+  L E+L +     +++  +   IT +  +     L++N +L  L+L
Sbjct: 781  LDVSGNFLQDSGIRLLCEALRHPTCNLQKLLLSLCHITDSSCQDVSFALKNNRSLIHLDL 840

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
              N + + GVK LC+ L + N  ++ L+L +  L        + +LK N  L  L L  N
Sbjct: 841  GCNNLYNHGVKLLCEALENQNCNLQTLELWNCQLSAACCHEFSSVLKKNQSLTHLNLGAN 900

Query: 285  MIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +  +G   L EAL  +N  ++ L L      A+G   L+  L+ N++L  L L GN +G
Sbjct: 901  PLRNNGVKVLCEALGNQNCKLQKLKLCKCLLSAVGCRYLSTALKSNQNLTHLKLTGNGLG 960

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
            D+G++ L   L +   KL  L    N  +    + +A Y 
Sbjct: 961  DDGVKLLFEALKNSDCKLQKLTHNKNEANEMTLYLLAAYF 1000


>gi|320165823|gb|EFW42722.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 465

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 140/282 (49%), Gaps = 36/282 (12%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L+   IGD G RA+   L   K  L  L++G N I + GA  +AE +K   +L  + L
Sbjct: 24  LDLNQEQIGDAGARAIAEALKVNK-TLTSLNLGWNQIGSDGAQEIAEALKVNTTLTKLYL 82

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+I + GA  IA+ALK NRT+T + L    I   GA AIA  L+ N+ +T LDL  N 
Sbjct: 83  ESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKLTLLDLEVNQ 142

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A +E LK +  ++ L L   QIG +GA  +A+ L  N  +  L L AN + D 
Sbjct: 143 IGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTMLEYLFLEANQITD- 201

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                           GA+ +A++ K VN  L  + L  N+I D
Sbjct: 202 -------------------------------VGAQAIAEAPK-VNTRLEILYLEVNQIGD 229

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            GA AIA ALK N    +TSL L  N +   G  A+ +A+++
Sbjct: 230 TGAQAIADALKVN--TTLTSLTLQGNCIGNVGVQAIDEARNV 269



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 149/312 (47%), Gaps = 36/312 (11%)

Query: 150 SKQTLNEFAK----ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           S Q++ E  +    ++ A  S+D++    GD G   +AE+L  N+T   ++   N I + 
Sbjct: 3   SDQSMTERQRVLYDQVNASESLDLNQEQIGDAGARAIAEALKVNKTLTSLNLGWNQIGSD 62

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G +     L+ N  L  L L  N I + G   + + L  N  +  L L    +   GA+A
Sbjct: 63  GAQEIAEALKVNTTLTKLYLESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQA 122

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IAE L+ N+ L +L+L  N I  +G  + AEAL  N+T+  L L  N  G  GA A+A+ 
Sbjct: 123 IAEALRVNTKLTLLDLEVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEA 182

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LEGN  L  L L  N I D G +A                             +AE  K 
Sbjct: 183 LEGNTMLEYLFLEANQITDVGAQA-----------------------------IAEAPKV 213

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI--ARVLKDNS 443
              L  + L +N IGD GA+ IADALK N T+T++ L GN I + G  AI  AR + D +
Sbjct: 214 NTRLEILYLEVNQIGDTGAQAIADALKVNTTLTSLTLQGNCIGNVGVQAIDEARNVND-T 272

Query: 444 VITSLDLAYNPI 455
           +  S+D   +P+
Sbjct: 273 IEVSIDGQMHPL 284



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 11/197 (5%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           ++DL    I   GA AIA  LK N  +TSL+L +N IG+DGA+ ++E LK +  +  L L
Sbjct: 23  SLDLNQEQIGDAGARAIAEALKVNKTLTSLNLGWNQIGSDGAQEIAEALKVNTTLTKLYL 82

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
              +I  +GA  +A+ L+ N T++ L LR   +      G  G      A+     +   
Sbjct: 83  ESNEIANAGALAIAEALKVNRTLTELYLRDTRI------GGAGAQAIAEALRVNTKLTLL 136

Query: 539 SLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
            L +N +   GA+  A++ K VN  L+ + L  N+I D GA AIA+AL+ N    +  L 
Sbjct: 137 DLEVNQIGDTGAQAFAEALK-VNTTLSWLLLWQNQIGDAGALAIAEALEGN--TMLEYLF 193

Query: 597 LANNFLTKFGQSALTDA 613
           L  N +T  G  A+ +A
Sbjct: 194 LEANQITDVGAQAIAEA 210



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 8/203 (3%)

Query: 145 KLFRESKQTLN-------EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
           KL+ ES +  N       E  K  R  + + +     G  G   +AE+L  N     +  
Sbjct: 79  KLYLESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKLTLLDL 138

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
             N I   G +AF   L+ N  L  L L  N IGD G   + + L  N  +E L L +  
Sbjct: 139 EVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTMLEYLFLEANQ 198

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + D GA+AIAE  K N+ L +L L  N I  +G  ++A+AL  N+T+ SL L GN  G +
Sbjct: 199 ITDVGAQAIAEAPKVNTRLEILYLEVNQIGDTGAQAIADALKVNTTLTSLTLQGNCIGNV 258

Query: 318 GANALAKGLEGNKSLRELHLHGN 340
           G  A+ +    N ++ E+ + G 
Sbjct: 259 GVQAIDEARNVNDTI-EVSIDGQ 280


>gi|17546075|ref|NP_519477.1| GALA protein 4 [Ralstonia solanacearum GMI1000]
 gi|17428371|emb|CAD15058.1| type III effector protein gala6 [Ralstonia solanacearum GMI1000]
          Length = 620

 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 230/467 (49%), Gaps = 94/467 (20%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++  S+ + G   GD      A++L  +++ + +  + N I   G +A  G       L 
Sbjct: 213 KSLVSLSLIGCGIGDRA----AQALVASRSIQCLDLSVNRIGRDGAQALAGA-----PLV 263

Query: 222 TLNLSGNPIGDEGVKCLC--------DIL---VDNAGVE---------RLQLSSVDLRDE 261
           +LNL  N IG+EG + L         D+    V NAG E         +L L+   +  +
Sbjct: 264 SLNLHNNEIGNEGARVLATSRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMISGD 323

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+A+A+    N  L  L+L+NN +  +G    A+AL ++ +  SL L GN  GA GA A
Sbjct: 324 GAQALAD----NKSLTDLDLSNNRLGDAG----AQALADSESFVSLKLGGNEIGADGAEA 375

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+    N  L+ L+L  N IG  G+ AL       + KL  LD+   +I + GA  +A 
Sbjct: 376 LAR----NVVLQSLNLSYNPIGFWGVNALG------RAKLRKLDLCACAIDSDGASALAR 425

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
                 SL  + L  N IGD+GA     AL +N T+T ++L GNNIH+ GA A+A    +
Sbjct: 426 NT----SLASLYLGSNRIGDDGAR----ALAKNSTLTLLNLSGNNIHAVGAQALA---SN 474

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           +S+IT LDL+ N IG DG  AL+     H  + +L L   QIG++GA+ +A     + T+
Sbjct: 475 DSLIT-LDLSRNGIGDDGTAALA----CHPRLTSLNLSRNQIGSTGAQQLAK----SATL 525

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY----LQGAKCLAQSFKV 557
           + LDL  N +  E   G   L+         +  +  +L ++Y      GA+ LA+S   
Sbjct: 526 AELDLSENRIGPE---GAEALA---------RSTVLTTLNVSYNAIGEAGARALAESV-- 571

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
              +LTS+D   N I +DG    A+ L+AN  +  T  N   NFL +
Sbjct: 572 ---SLTSLDARRNGIGEDG----AKVLEANTRITGTPQN--PNFLAE 609



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 162/341 (47%), Gaps = 66/341 (19%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           A L +  ++SL+LNG   G  GA  LA     +KSL  L L G  IGD   +AL++  S 
Sbjct: 184 AHLASMPLKSLNLNGIEIGVEGARTLAA----SKSLVSLSLIGCGIGDRAAQALVASRS- 238

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
               +  LD+  N I   GA  +A        L+ +NL+ N+IG+EGA  +A     +RT
Sbjct: 239 ----IQCLDLSVNRIGRDGAQALA-----GAPLVSLNLHNNEIGNEGARVLA----TSRT 285

Query: 417 ITTIDLGGNNIHSKGASAI--------------------ARVLKDNSVITSLDLAYNPIG 456
           +T++D+  N + + GA A                     A+ L DN  +T LDL+ N +G
Sbjct: 286 LTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMISGDGAQALADNKSLTDLDLSNNRLG 345

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             GA+AL++   F     +LKLG  +IGA GAE +A     N  +  L+L  N +     
Sbjct: 346 DAGAQALADSESFV----SLKLGGNEIGADGAEALA----RNVVLQSLNLSYNPI----- 392

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
            G  G++    A   L+ +   +  I+   GA  LA+     N +L S+ L  N I DDG
Sbjct: 393 -GFWGVNALGRA--KLRKLDLCACAIDS-DGASALAR-----NTSLASLYLGSNRIGDDG 443

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
           A A+A+      +  +T LNL+ N +   G  AL     L+
Sbjct: 444 ARALAK------NSTLTLLNLSGNNIHAVGAQALASNDSLI 478


>gi|290970571|ref|XP_002668179.1| predicted protein [Naegleria gruberi]
 gi|284081412|gb|EFC35435.1| predicted protein [Naegleria gruberi]
          Length = 592

 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 211/422 (50%), Gaps = 88/422 (20%)

Query: 131 SVGAGTNLLSGFTGKLFRESKQ--TLNEF-----------AKELRAFSSVDMSGRNFGDE 177
           S+   TN++ G   K   E KQ  +L+ F             E++  +S+++S      E
Sbjct: 209 SLDISTNVIGGEGAKFISEMKQLTSLDIFYNRIGGEGAKLISEMKQLTSLNISTNEIDVE 268

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G   ++E     +    ++ + N I   G+K+  G+ Q    L +LN+SGN IGDEG K 
Sbjct: 269 GSKLISEM----KQLTSLNISGNLIGVEGVKSISGMKQ----LTSLNISGNLIGDEGAKL 320

Query: 238 LCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMI------ 286
           +          E  QL+S+D+      DEG K+I+E+ +    L   +++NN+I      
Sbjct: 321 IS---------EMKQLTSLDIYNNRIGDEGVKSISEMKQ----LTSFDISNNLIYDEGAK 367

Query: 287 DYSGFTSLAEALLENSTI--------------RSLHLNGNYGGALGANALAKGLEGNKSL 332
             SG   L    + N+ I               SL+++ N     GA    K + G K L
Sbjct: 368 SISGMKQLTSLTISNNRIGGEGVKFISEIKQLTSLNISKNEIDGEGA----KFISGMKQL 423

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L ++ N IGDEG++++     S   +L  LDI NN I  +G   ++E     + L+ +
Sbjct: 424 TSLTIYKNGIGDEGVKSI-----SEMKQLTSLDISNNRIGDEGVKSISEM----EQLISL 474

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  N IG EGA+ I++ +KQ   +T++D+ GN I+ +G  +I+ + +    +TSL+++ 
Sbjct: 475 DISTNVIGGEGAKFISE-MKQ---LTSLDISGNLIYDEGVKSISEMKQ----LTSLNISG 526

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG +GAK +SE+ +    + +L +   +IG +GA+F+++M +  +    LD+ AN + 
Sbjct: 527 NQIGVEGAKFISEMKQ----LTSLDISKNEIGDAGAKFISEMKQLTS----LDVYANRIS 578

Query: 513 DE 514
           DE
Sbjct: 579 DE 580



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 247/492 (50%), Gaps = 87/492 (17%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F   ++  +SVD+SG   G EG    A+S+   +    ++ + N I   G K+  G+  
Sbjct: 127 KFISGMKQLTSVDISGNRIGIEG----AKSISEMKQLTSLNISNNIIGVEGAKSISGMKH 182

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELL 270
               L +L++SGN IGDEGVK +          E  QL S+D+       EGAK I+E+ 
Sbjct: 183 ----LTSLDISGNRIGDEGVKSIS---------EMEQLISLDISTNVIGGEGAKFISEMK 229

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +    L  L++  N I   G    A+ + E   + SL+++ N     G+  +++     K
Sbjct: 230 Q----LTSLDIFYNRIGGEG----AKLISEMKQLTSLNISTNEIDVEGSKLISE----MK 277

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L++ GN IG EG++++ SG+     +L  L+I  N I  +GA  ++E     K L 
Sbjct: 278 QLTSLNISGNLIGVEGVKSI-SGMK----QLTSLNISGNLIGDEGAKLISE----MKQLT 328

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +++Y N IGDEG + I++ +KQ   +T+ D+  N I+ +GA +I+ + +    +TSL +
Sbjct: 329 SLDIYNNRIGDEGVKSISE-MKQ---LTSFDISNNLIYDEGAKSISGMKQ----LTSLTI 380

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           + N IG +G K +SE+ +    + +L +   +I   GA+F++ M +  +    L +  NG
Sbjct: 381 SNNRIGGEGVKFISEIKQ----LTSLNISKNEIDGEGAKFISGMKQLTS----LTIYKNG 432

Query: 511 LRDEVCSGCNGLSFFHS--------------AIYSLKHMLFYSLCINYL--QGAKCLAQS 554
           + DE     + +    S              +I  ++ ++   +  N +  +GAK +++ 
Sbjct: 433 IGDEGVKSISEMKQLTSLDISNNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEM 492

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
                + LTS+D++ N I D+G  +I++  +      +TSLN++ N +   G   +++ K
Sbjct: 493 -----KQLTSLDISGNLIYDEGVKSISEMKQ------LTSLNISGNQIGVEGAKFISEMK 541

Query: 615 DLV-YEMSEKEV 625
            L   ++S+ E+
Sbjct: 542 QLTSLDISKNEI 553


>gi|320170893|gb|EFW47792.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 401

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 121/232 (52%), Gaps = 1/232 (0%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            +  L+G  +GD G  A+   L      +  L +  N I   GA  +AE +K  +++  +
Sbjct: 23  HDFSLYGEEVGDAGAPAIAEALKVNT-TMTWLALWQNQIGEVGARALAETLKVNETVTKL 81

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +++ N IGD GA  IA+ALK N T+  +DLGGN I   GASAIA  LK N  +T LDL  
Sbjct: 82  DIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDE 141

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG+ GA+AL+E  K +  +  + LG   IG +GA+ +A++++ N T++ L+L  N + 
Sbjct: 142 NQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAGAQAIAELIKVNKTLAWLNLSWNCIG 201

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
           D           FH +  +L+    +S  +  L      A   + V   LTS
Sbjct: 202 DVGIQAIADAREFHPSPTALRISFQFSPLVLSLLPRLATADDLQTVFGLLTS 253



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 29/220 (13%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
           T  + S     +  AG  A    L+ N  +  L L  N IG+ G + L + L  N  V +
Sbjct: 21  TPHDFSLYGEEVGDAGAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTK 80

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L +    + D GA AIAE LK N+ + +++L  N I   G +++AEAL  N T+  L L+
Sbjct: 81  LDIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLD 140

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G+ GA ALA+  + N ++ ++ L  N IGD G +A                     
Sbjct: 141 ENQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAGAQA--------------------- 179

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
                   +AE IK  K+L W+NL  N IGD G + IADA
Sbjct: 180 --------IAELIKVNKTLAWLNLSWNCIGDVGIQAIADA 211



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 95/182 (52%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G   GD G   +AE+L  N T   ++   N I   G +A    L+ N  +  L++  N
Sbjct: 27  LYGEEVGDAGAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWRN 86

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G   + + L  N  V  + L    + D GA AIAE LK N  +  L+L+ N I  
Sbjct: 87  QIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIGS 146

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  +LAEA   N+T+  + L  N  G  GA A+A+ ++ NK+L  L+L  N IGD GI+
Sbjct: 147 AGAQALAEAFKVNTTVTQVDLGENLIGDAGAQAIAELIKVNKTLAWLNLSWNCIGDVGIQ 206

Query: 349 AL 350
           A+
Sbjct: 207 AI 208



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 11/197 (5%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L G  +   GA AIA  LK N+ +T L L  N IG  GA+AL+E LK +  +  L +   
Sbjct: 27  LYGEEVGDAGAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWRN 86

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           QIG +GA  +A+ L+ N T++++DL  N + D       G S    A+   K +    L 
Sbjct: 87  QIGDAGASAIAEALKVNTTVNMVDLGGNQISD------IGASAIAEALKVNKTVTKLDLD 140

Query: 542 INYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            N +   GA+ LA++FK VN  +T +DL  N I D GA AIA+ +K N+ +A   LNL+ 
Sbjct: 141 ENQIGSAGAQALAEAFK-VNTTVTQVDLGENLIGDAGAQAIAELIKVNKTLA--WLNLSW 197

Query: 600 NFLTKFGQSALTDAKDL 616
           N +   G  A+ DA++ 
Sbjct: 198 NCIGDVGIQAIADAREF 214



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 68/146 (46%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  K     + +D+     GD G   +AE+L  N T   V    N I+  G  A  
Sbjct: 66  RALAETLKVNETVTKLDIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIA 125

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  +  L+L  N IG  G + L +    N  V ++ L    + D GA+AIAEL+K
Sbjct: 126 EALKVNKTVTKLDLDENQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAGAQAIAELIK 185

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEA 297
            N  L  L L+ N I   G  ++A+A
Sbjct: 186 VNKTLAWLNLSWNCIGDVGIQAIADA 211


>gi|320168153|gb|EFW45052.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 866

 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 123/219 (56%), Gaps = 1/219 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEA+  N+T+  L L GN    +GA A+A+ +  N +L  + L  N IGD G RA   
Sbjct: 259 AVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLTENRIGDAGARAFAE 318

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  LD+  N I   GA  +AE +K  K+L  + L+ N IG  GA+ IADALK
Sbjct: 319 TLKV-NNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIGAAGAQAIADALK 377

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+T + L  N I   GA AIA  L+ N+ +T L L  N I   GA+AL+E LK +  
Sbjct: 378 VNTTLTDLALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTT 437

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           +  L LG  QIG +GA  +A+ L+ N T+++L L  N L
Sbjct: 438 VTKLDLGSNQIGDAGARAIAEALKVNETLTMLYLNNNFL 476



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 180/397 (45%), Gaps = 59/397 (14%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLS-GNP---------IGDEGVKCLCDILVDNAGVERL 251
           +       F   L   IA++ ++ S  NP         IG    KC  D  +D A   R 
Sbjct: 133 VVPGATTCFVHALSGEIAVQVVSCSVDNPPKRVRQVSRIGSARAKCWDDEGLDRA---RS 189

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            L S      G +A AE +       V E    M+ Y   T   + L +     S  L  
Sbjct: 190 ALCSTCALHSG-RADAEFMNP-----VAEPCFQMLSYQNMTEKQQQLFDTVEDASQLLEV 243

Query: 312 NYG------GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +       G   A A+A+ ++ N ++ EL L GN I D G RA+   + +    L V+D
Sbjct: 244 KHSLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRA-NCTLTVVD 302

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   GA   AE +K   +L  ++L  N IGD GA+ IA+ALK N+T+TT+ L  N
Sbjct: 303 LTENRIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQN 362

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I + GA AIA  LK N+ +T L L  N IG DGA+A++E L+ +  +  L L   QI  
Sbjct: 363 QIGAAGAQAIADALKVNTTLTDLALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITC 422

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
           +GA+ +A+ L+ N T++ LDL +N + D                                
Sbjct: 423 TGAQALAEALKANTTVTKLDLGSNQIGDA------------------------------- 451

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
            GA+ +A++ K VNE LT + L  N +  DG  A  Q
Sbjct: 452 -GARAIAEALK-VNETLTMLYLNNNFLTTDGIAAFRQ 486



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 102/259 (39%), Positives = 139/259 (53%), Gaps = 12/259 (4%)

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
           S L   K  L    IGN    A     VAE IK   ++  + L  N I D GA  IA+A+
Sbjct: 238 SQLLEVKHSLCKKQIGNADAKA-----VAEAIKVNTTMTELKLGGNLIADVGARAIAEAV 292

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           + N T+T +DL  N I   GA A A  LK N+ +T LDL  N IG  GA+A++E LK + 
Sbjct: 293 RANCTLTVVDLTENRIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNK 352

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYS 531
            + TL L   QIGA+GA+ +AD L+ N T++ L L  N + D+   G   ++       +
Sbjct: 353 TLTTLGLWQNQIGAAGAQAIADALKVNTTLTDLALYQNKIGDD---GAQAIAEALEVNTT 409

Query: 532 LKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
           L  +  +   I    GA+ LA++ K  N  +T +DL  N+I D GA AIA+ALK NE   
Sbjct: 410 LTKLYLWENQIT-CTGAQALAEALK-ANTTVTKLDLGSNQIGDAGARAIAEALKVNE--T 465

Query: 592 VTSLNLANNFLTKFGQSAL 610
           +T L L NNFLT  G +A 
Sbjct: 466 LTMLYLNNNFLTTDGIAAF 484



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 132/271 (48%), Gaps = 29/271 (10%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S     I  A  KA    ++ N  +  L L GN I D G + + + +  N  +  + L+ 
Sbjct: 246 SLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLTE 305

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+A AE LK N+ L  L+L+ N I  +G  ++AEAL  N T+ +L L  N  G
Sbjct: 306 NRIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIG 365

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           A GA A+A  L+ N +L +L L+ N IGD+G +A                          
Sbjct: 366 AAGAQAIADALKVNTTLTDLALYQNKIGDDGAQA-------------------------- 399

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
              +AE ++   +L  + L+ N I   GA+ +A+ALK N T+T +DLG N I   GA AI
Sbjct: 400 ---IAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTTVTKLDLGSNQIGDAGARAI 456

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           A  LK N  +T L L  N +  DG  A  + 
Sbjct: 457 AEALKVNETLTMLYLNNNFLTTDGIAAFRQT 487



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 132/282 (46%), Gaps = 32/282 (11%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  +  G+     +AE++  N T  E+    N I   G +A    +++N  L  ++L+ N
Sbjct: 247 LCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLTEN 306

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G +   + L  N  + +L L    + D GA+AIAE LK N  L  L L  N I  
Sbjct: 307 RIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIGA 366

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++A+AL  N+T+  L L  N  G  GA A+A+ LE N +L +L+L  N I   G +
Sbjct: 367 AGAQAIADALKVNTTLTDLALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQ 426

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L +    +  LD+G+N I                            GD GA  IA
Sbjct: 427 ALAEALKANT-TVTKLDLGSNQI----------------------------GDAGARAIA 457

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           +ALK N T+T + L  N + + G   IA   +  + I  LDL
Sbjct: 458 EALKVNETLTMLYLNNNFLTTDG---IAAFRQTGNAICDLDL 496



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 103/197 (52%), Gaps = 3/197 (1%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A+ +RA    + VD++    GD G    AE+L  N T  ++    N I  AG +A    
Sbjct: 288 IAEAVRANCTLTVVDLTENRIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEA 347

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L TL L  N IG  G + + D L  N  +  L L    + D+GA+AIAE L+ N
Sbjct: 348 LKVNKTLTTLGLWQNQIGAAGAQAIADALKVNTTLTDLALYQNKIGDDGAQAIAEALEVN 407

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L L  N I  +G  +LAEAL  N+T+  L L  N  G  GA A+A+ L+ N++L 
Sbjct: 408 TTLTKLYLWENQITCTGAQALAEALKANTTVTKLDLGSNQIGDAGARAIAEALKVNETLT 467

Query: 334 ELHLHGNSIGDEGIRAL 350
            L+L+ N +  +GI A 
Sbjct: 468 MLYLNNNFLTTDGIAAF 484


>gi|57671|emb|CAA44388.1| ribonuclease inhibitor [Rattus norvegicus]
          Length = 456

 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 175/357 (49%), Gaps = 7/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S     +T AG      VL+S   L
Sbjct: 52  ALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GDEG+K LC+ L D    +E+LQL   +L     + +A +L+     + L
Sbjct: 111 RELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN    +G  +L + L +++  + SL L      +     L   +    SL+EL L 
Sbjct: 171 VLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     +L  L + +  ++A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +        VL  NS +  L ++ NP+G 
Sbjct: 291 LKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNSSLFELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            G   L + L +   +   L LG C +  SG   +A +L  N ++  LDL  N + D
Sbjct: 351 SGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGD 407



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 179/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            E L   Q  + V     G+T    K     +Q+N AL  L+L  N +GD GV  +   L
Sbjct: 16  TELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
            +    +++L L +  L + G   + ++L++ S LR L LN+N +   G   L E L + 
Sbjct: 76  QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL L  N   + GI  L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITT 419
           L  L + N  I++     + + + +  SL  ++L  N +G+ G   +    L  +  + T
Sbjct: 196 LESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + L   ++ ++G   + RVL+    +  L LA N +  +GA+ L E L   G  + +L +
Sbjct: 256 LWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C + A+       +L  N+++  L + +N L D  V   C  L +  + +     +L+
Sbjct: 316 KTCSLTAASCPHFCSVLTKNSSLFELQMSSNPLGDSGVVELCKALGYPDTVL----RVLW 371

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
              C     G   LA +  + N +L  +DL+ N + D+G   + ++LK
Sbjct: 372 LGDCDVTDSGCSSLA-TVLLANRSLRELDLSNNCMGDNGVLQLLESLK 418



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 144/351 (41%), Gaps = 40/351 (11%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + L     + ++    GDEGL  L E L   Q   E++      +TA   +   
Sbjct: 99  VLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL+     K L LS N   + G+  LC  L D+A  +E L+L +  +     K + +++
Sbjct: 159 SVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            + + L+ L+L +N +  +G  +L   LL  S  +R+L L      A G   L + L   
Sbjct: 219 ASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KN--- 385
           +SL+EL L GN + DEG + L   L     +L  L +   S++A    H    + KN   
Sbjct: 279 QSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNSSL 338

Query: 386 ------------------CKSL---------LWINLYMNDIGDEGAEKIADALKQNRTIT 418
                             CK+L         LW+     D+ D G   +A  L  NR++ 
Sbjct: 339 FELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLG--DCDVTDSGCSSLATVLLANRSLR 396

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITS----LDLAYNPIGADGAKALSE 465
            +DL  N +   G   +   LK  S I       D+ +     D  +AL E
Sbjct: 397 ELDLSNNCMGDNGVLQLLESLKQPSCILQQLVLYDIYWTDEVEDQLRALEE 447


>gi|407849923|gb|EKG04494.1| hypothetical protein TCSYLVIO_004444 [Trypanosoma cruzi]
          Length = 738

 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 205/433 (47%), Gaps = 55/433 (12%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ +N   K   L  +  G    + +  IL +N     L LS   LRDEGA +IA+L
Sbjct: 126 FMELISANCRGKFFCLKESGFGPMCAEAIAHILSNNRKYTILDLSGNRLRDEGACSIAKL 185

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALA 323
           ++ N  +  + L +N I + G  +LA ALLEN+T+ SL L      NGN+    GA A+ 
Sbjct: 186 IRINRTIVHVGLRSNDIGHIGGVALARALLENNTVVSLDLGAHSGINGNHIATEGAEAIG 245

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV--LDIGNNSISAKGAFHVAE 381
             L  NK L  L+L  N +G  G+  ++ GL    G  +V  LDI  N++   G   +A 
Sbjct: 246 VMLRANKVLSHLNLSSNGLGVSGVSFIVGGLD---GNCSVKHLDISVNNLGYAGIKALAP 302

Query: 382 YIKNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIA 436
            ++    +  ++L  N +GD G     + IA+A++     +  ++L  N +  K A A+ 
Sbjct: 303 VLETT-CITHLSLQRNSMGDNGGMVLFKAIAEAIEDGEDKLEYLNLEVNELGEKTAKAMQ 361

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           RVL  ++ + +L L+YN  G   +K + E L  +  + +L L +C+I  +    V   L 
Sbjct: 362 RVLSSSTALKTLRLSYNSFGG-ASKYIMEGLAENKYLRSLFLSFCEIREADGAAVGAALT 420

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
            N+T+  LDL  N L+D                                 G+KC+A++ K
Sbjct: 421 ANSTLQHLDLSNNKLKD--------------------------------AGSKCIAEAMK 448

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
             N+ L S++L+ N+I D G  AIA  L +N    +  LNL  N ++      L D   L
Sbjct: 449 -TNKGLISLNLSCNKIADGGGKAIALFLTSNR--TLRELNLRRNCMSNATGELLDD--QL 503

Query: 617 VYEMSEKEVNIFF 629
              M+ +++N+ F
Sbjct: 504 RGNMTLEKMNVGF 516



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 202/447 (45%), Gaps = 30/447 (6%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R ++ +D+SG    DEG   +A+ +  N+T   V   +N I   G  A    L  N  + 
Sbjct: 162 RKYTILDLSGNRLRDEGACSIAKLIRINRTIVHVGLRSNDIGHIGGVALARALLENNTVV 221

Query: 222 TLNL------SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +L+L      +GN I  EG + +  +L  N  +  L LSS  L   G   I   L  N  
Sbjct: 222 SLDLGAHSGINGNHIATEGAEAIGVMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNCS 281

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN----GNYGGALGANALAKGLE-GNK 330
           ++ L+++ N + Y+G  +LA  +LE + I  L L     G+ GG +   A+A+ +E G  
Sbjct: 282 VKHLDISVNNLGYAGIKALA-PVLETTCITHLSLQRNSMGDNGGMVLFKAIAEAIEDGED 340

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L+L  N +G++  +A+   LSS    L  L +  NS      + + E +   K L 
Sbjct: 341 KLEYLNLEVNELGEKTAKAMQRVLSSSTA-LKTLRLSYNSFGGASKY-IMEGLAENKYLR 398

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L   +I +     +  AL  N T+  +DL  N +   G+  IA  +K N  + SL+L
Sbjct: 399 SLFLSFCEIREADGAAVGAALTANSTLQHLDLSNNKLKDAGSKCIAEAMKTNKGLISLNL 458

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTISILDLRAN 509
           + N I   G KA++  L  +  +  L L   C   A+G E + D LR N T+  +++  N
Sbjct: 459 SCNKIADGGGKAIALFLTSNRTLRELNLRRNCMSNATG-ELLDDQLRGNMTLEKMNVGFN 517

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV--VNEALTSIDL 567
             R +   G       H A  +       SL +  L+ A+    SFK   +++A   I++
Sbjct: 518 DFRYKSLIG-------HRATLARNAEKNKSLIVPKLK-AEIEGLSFKERDLSQAEDEIEM 569

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTS 594
               I+D       Q L+ NE+  V S
Sbjct: 570 ERRIIKDRS----EQLLRRNEEARVAS 592


>gi|351713421|gb|EHB16340.1| Ribonuclease inhibitor [Heterocephalus glaber]
          Length = 456

 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 173/356 (48%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + + +     GD G+  + + L       + +S    G+T  G +    VL+    L+
Sbjct: 52  ALAELSLRTNALGDAGVCLVLQGLQSPTCKVQSLSLQNCGLTETGCRVLASVLRCTPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ L + L+D  + +E+L+L S +L     + +A +L+     + L 
Sbjct: 112 ELHLSDNPLGDPGLRLLSEGLLDPQSCLEKLELESCNLSAASCEPLAAMLRAKPNFKELV 171

Query: 281 LNNNMIDYSGFTSLAEALLENSTI-RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G   L   L E++ +  +L L+     +     L   +    SL+EL L G
Sbjct: 172 VSNNCIQEAGIRMLCGGLKESTCLLETLRLDNCGVTSANCKDLCDVVAAKPSLQELDLGG 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI AL  GL     +L  L +    I+A+G   + + ++  +SL  ++L +N++
Sbjct: 232 NRLGDAGIAALCPGLLHTSCRLRKLWLWECDITAEGCRDLGQVLRAKQSLKALSLMLNEL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +AL++    +  + +   +  +        +L  N  +T L L  N +G  
Sbjct: 292 GDEGARLLCEALQEPSCQLECLWVRVCSFTATCCPHFRALLAQNKFLTELQLGENRLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L +G C +  +    +A +L  + ++  LDL  NGL D
Sbjct: 352 GVQELCQGLSQPGSVLRVLGIGDCDLSDNCCSNLASVLLASCSLRELDLSNNGLGD 407



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 174/413 (42%), Gaps = 22/413 (5%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL- 242
           E L   Q  + V     G+T    K     L++N AL  L+L  N +GD GV   C +L 
Sbjct: 17  ELLPLIQQHQVVRLEDCGLTEGRCKDIGSALRANSALAELSLRTNALGDAGV---CLVLQ 73

Query: 243 ---VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
                   V+ L L +  L + G + +A +L+    LR L L++N +   G   L+E LL
Sbjct: 74  GLQSPTCKVQSLSLQNCGLTETGCRVLASVLRCTPTLRELHLSDNPLGDPGLRLLSEGLL 133

Query: 300 E-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           +  S +  L L      A     LA  L    + +EL +  N I + GIR L  GL    
Sbjct: 134 DPQSCLEKLELESCNLSAASCEPLAAMLRAKPNFKELVVSNNCIQEAGIRMLCGGLKEST 193

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-I 417
             L  L + N  +++     + + +    SL  ++L  N +GD G   +   L      +
Sbjct: 194 CLLETLRLDNCGVTSANCKDLCDVVAAKPSLQELDLGGNRLGDAGIAALCPGLLHTSCRL 253

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTL 476
             + L   +I ++G   + +VL+    + +L L  N +G +GA+ L E L+     +  L
Sbjct: 254 RKLWLWECDITAEGCRDLGQVLRAKQSLKALSLMLNELGDEGARLLCEALQEPSCQLECL 313

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSL--- 532
            +  C   A+       +L  N  ++ L L  N L D  V   C GLS   S +  L   
Sbjct: 314 WVRVCSFTATCCPHFRALLAQNKFLTELQLGENRLGDAGVQELCQGLSQPGSVLRVLGIG 373

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
              L  + C N          S  + + +L  +DL+ N + D G   + ++L+
Sbjct: 374 DCDLSDNCCSNL--------ASVLLASCSLRELDLSNNGLGDPGVLRLVESLR 418



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 6/270 (2%)

Query: 150 SKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAA 205
           S  +    A  LRA   F  + +S     + G+  L   L  +    E +     G+T+A
Sbjct: 150 SAASCEPLAAMLRAKPNFKELVVSNNCIQEAGIRMLCGGLKESTCLLETLRLDNCGVTSA 209

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAK 264
             K    V+ +  +L+ L+L GN +GD G+  LC  +L  +  + +L L   D+  EG +
Sbjct: 210 NCKDLCDVVAAKPSLQELDLGGNRLGDAGIAALCPGLLHTSCRLRKLWLWECDITAEGCR 269

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            + ++L+    L+ L L  N +   G   L EAL E S  +  L +      A       
Sbjct: 270 DLGQVLRAKQSLKALSLMLNELGDEGARLLCEALQEPSCQLECLWVRVCSFTATCCPHFR 329

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  NK L EL L  N +GD G++ L  GLS     L VL IG+  +S     ++A  +
Sbjct: 330 ALLAQNKFLTELQLGENRLGDAGVQELCQGLSQPGSVLRVLGIGDCDLSDNCCSNLASVL 389

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
               SL  ++L  N +GD G  ++ ++L+Q
Sbjct: 390 LASCSLRELDLSNNGLGDPGVLRLVESLRQ 419



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 133/328 (40%), Gaps = 32/328 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
              + +S    GD GL  L+E L   Q+  E++   +  ++AA  +    +L++    K 
Sbjct: 110 LRELHLSDNPLGDPGLRLLSEGLLDPQSCLEKLELESCNLSAASCEPLAAMLRAKPNFKE 169

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L +S N I + G++ LC  L ++  + E L+L +  +     K + +++     L+ L+L
Sbjct: 170 LVVSNNCIQEAGIRMLCGGLKESTCLLETLRLDNCGVTSANCKDLCDVVAAKPSLQELDL 229

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N +  +G  +L   LL  S  +R L L      A G   L + L   +SL+ L L  N
Sbjct: 230 GGNRLGDAGIAALCPGLLHTSCRLRKLWLWECDITAEGCRDLGQVLRAKQSLKALSLMLN 289

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GDEG R L   L     +L  L +   S +A    H    +   K L  + L  N +G
Sbjct: 290 ELGDEGARLLCEALQEPSCQLECLWVRVCSFTATCCPHFRALLAQNKFLTELQLGENRLG 349

Query: 401 DEGAEKIADALKQ-----------------------------NRTITTIDLGGNNIHSKG 431
           D G +++   L Q                             + ++  +DL  N +   G
Sbjct: 350 DAGVQELCQGLSQPGSVLRVLGIGDCDLSDNCCSNLASVLLASCSLRELDLSNNGLGDPG 409

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADG 459
              +   L+    +    L ++   +DG
Sbjct: 410 VLRLVESLRQPGCVLECLLLFDVYLSDG 437



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 31/233 (13%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   +D+ G   GD G+  L   L +      ++      ITA G +    VL++  +LK
Sbjct: 223 SLQELDLGGNRLGDAGIAALCPGLLHTSCRLRKLWLWECDITAEGCRDLGQVLRAKQSLK 282

Query: 222 TLNLSGNPIGDEGVKCLCD-----------------------------ILVDNAGVERLQ 252
            L+L  N +GDEG + LC+                             +L  N  +  LQ
Sbjct: 283 ALSLMLNELGDEGARLLCEALQEPSCQLECLWVRVCSFTATCCPHFRALLAQNKFLTELQ 342

Query: 253 LSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           L    L D G + + + L +  S+LRVL + +  +  +  ++LA  LL + ++R L L+ 
Sbjct: 343 LGENRLGDAGVQELCQGLSQPGSVLRVLGIGDCDLSDNCCSNLASVLLASCSLRELDLSN 402

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           N  G  G   L + L     + E  L  +    +G+   +  L   K  L ++
Sbjct: 403 NGLGDPGVLRLVESLRQPGCVLECLLLFDVYLSDGVNDQLQALEEEKPTLRII 455


>gi|401415564|ref|XP_003872277.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|322488501|emb|CBZ23747.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 739

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 193/400 (48%), Gaps = 49/400 (12%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N  G    + L  +L  N+    L LS   LRD GA+ IA+L+K N  L  +++ +N
Sbjct: 153 LPENGFGVCSAEALGAVLSRNSHYSVLDLSGNCLRDNGARFIAQLIKRNRTLVHIDVASN 212

Query: 285 MIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLH 338
            I + G   +A ALLEN+T+ SL +      NGN+ G  GA AL + L  N+ L  L++ 
Sbjct: 213 DIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEALGELLRSNEVLARLNVS 272

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G  G+  + S L  R G L  L++ +N++  +GA  +A  ++  +   W  L  N 
Sbjct: 273 SNGLGAGGVAFIGSAL-ERNGSLTRLNLSSNNLGHEGARVLASALEAARVTHW-ELQRNH 330

Query: 399 IGDEGAEKIADAL-----KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           + D+G     +AL       N  +  +DL  N +    A A+ +VL  ++ +T+L L+ N
Sbjct: 331 LDDKGGACFLNALAGAIRNGNDVVEYLDLDNNVLGEGSADAVGKVLSVSASLTTLRLSGN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+GA G KA+S  L  + ++++L L  C I   GA  +  +L  N+T+  LD+  N ++D
Sbjct: 391 PLGA-GVKAISTGLNENHSLSSLHLSKCSIDHIGAAALGPVLCVNHTLRHLDMSNNRVKD 449

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA  LA+    VN+ LT+ +L+ N I 
Sbjct: 450 --------------------------------GGAVELAKGL-AVNKCLTTWNLSSNRIG 476

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             G   +A+A++ N    +  LNL  N + +    A++D+
Sbjct: 477 HAGGVEMAKAVQKNR--TLRHLNLRRNLMLEATGEAISDS 514



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 8/290 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G + G  G   L E L  N+    ++ ++NG+ A G+      L+ N +L  LNLS N
Sbjct: 243 VNGNHIGTPGAEALGELLRSNEVLARLNVSSNGLGAGGVAFIGSALERNGSLTRLNLSSN 302

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA----KAIAELLKN-NSILRVLELNN 283
            +G EG + L   L + A V   +L    L D+G      A+A  ++N N ++  L+L+N
Sbjct: 303 NLGHEGARVLASAL-EAARVTHWELQRNHLDDKGGACFLNALAGAIRNGNDVVEYLDLDN 361

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N++      ++ + L  ++++ +L L+GN  GA G  A++ GL  N SL  LHL   SI 
Sbjct: 362 NVLGEGSADAVGKVLSVSASLTTLRLSGNPLGA-GVKAISTGLNENHSLSSLHLSKCSID 420

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G  AL   L      L  LD+ NN +   GA  +A+ +   K L   NL  N IG  G
Sbjct: 421 HIGAAALGPVLCVNH-TLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAG 479

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             ++A A+++NRT+  ++L  N +      AI+   + N+ +  LD+AYN
Sbjct: 480 GVEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRTNNTLERLDVAYN 529



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 163/365 (44%), Gaps = 42/365 (11%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKA 209
           +  K  R    +D++  + G  G   +A +L  N T   +   A      N I   G +A
Sbjct: 196 QLIKRNRTLVHIDVASNDIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEA 255

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
              +L+SN  L  LN+S N +G  GV  +   L  N  + RL LSS +L  EGA+ +A  
Sbjct: 256 LGELLRSNEVLARLNVSSNGLGAGGVAFIGSALERNGSLTRLNLSSNNLGHEGARVLASA 315

Query: 270 LKNNSILRVLELNNNMIDYSG----FTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           L+   +    EL  N +D  G      +LA A+   N  +  L L+ N  G   A+A+ K
Sbjct: 316 LEAARVTH-WELQRNHLDDKGGACFLNALAGAIRNGNDVVEYLDLDNNVLGEGSADAVGK 374

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  + SL  L L GN +G  G++A+ +GL+     L+ L +   SI   GA  +   + 
Sbjct: 375 VLSVSASLTTLRLSGNPLG-AGVKAISTGLNENHS-LSSLHLSKCSIDHIGAAALGPVLC 432

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
              +L  +++  N + D GA ++A  L  N+ +TT +L  N I   G   +A+ ++ N  
Sbjct: 433 VNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAGGVEMAKAVQKNRT 492

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L+L  N +                           + A+G E ++D  R NNT+  L
Sbjct: 493 LRHLNLRRNLM---------------------------LEATG-EAISDSFRTNNTLERL 524

Query: 505 DLRAN 509
           D+  N
Sbjct: 525 DVAYN 529


>gi|398303848|ref|NP_001257691.1| ribonuclease inhibitor isoform a [Rattus norvegicus]
 gi|149061561|gb|EDM11984.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_b [Rattus
           norvegicus]
          Length = 492

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 174/357 (48%), Gaps = 7/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S     +T AG      VL+S   L
Sbjct: 88  ALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTL 146

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GDEG+K LC+ L D    +E+LQL   +L     + +A +L+     + L
Sbjct: 147 RELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKEL 206

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN    +G  +L + L +++  + SL L      +     L   +    SL+EL L 
Sbjct: 207 VLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLG 266

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     +L  L + +  ++A+G   +   ++  +SL  ++L  N+
Sbjct: 267 SNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNE 326

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +        VL  N  +  L ++ NP+G 
Sbjct: 327 LKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGD 386

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            G   L + L +   +   L LG C +  SG   +A +L  N ++  LDL  N + D
Sbjct: 387 SGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGD 443



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 147/320 (45%), Gaps = 4/320 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + L     + ++    GDEGL  L E L   Q   E++      +TA   +   
Sbjct: 135 VLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLA 194

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL+     K L LS N   + G+  LC  L D+A  +E L+L +  +     K + +++
Sbjct: 195 SVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVV 254

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            + + L+ L+L +N +  +G  +L   LL  S  +R+L L      A G   L + L   
Sbjct: 255 ASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAK 314

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+EL L GN + DEG + L   L     +L  L +   S++A    H    +   +SL
Sbjct: 315 QSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSL 374

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             + +  N +GD G  ++  AL    T+   + LG  ++   G S++A VL  N  +  L
Sbjct: 375 FELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLREL 434

Query: 449 DLAYNPIGADGAKALSEVLK 468
           DL+ N +G  G   L E LK
Sbjct: 435 DLSNNCMGDTGVLQLLESLK 454



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 184/426 (43%), Gaps = 11/426 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            E L   Q  + V     G+T    K     +Q+N AL  L+L  N +GD GV  +   L
Sbjct: 52  TELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL 111

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
            +    +++L L +  L + G   + ++L++ S LR L LN+N +   G   L E L + 
Sbjct: 112 QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDP 171

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL L  N   + GI  L  GL     +
Sbjct: 172 QCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQ 231

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITT 419
           L  L + N  I++     + + + +  SL  ++L  N +G+ G   +    L  +  + T
Sbjct: 232 LESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRT 291

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + L   ++ ++G   + RVL+    +  L LA N +  +GA+ L E L   G  + +L +
Sbjct: 292 LWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWV 351

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C + A+       +L  N ++  L + +N L D  V   C  L +  + +     +L+
Sbjct: 352 KTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVL----RVLW 407

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
              C     G   LA +  + N +L  +DL+ N + D G   + ++LK     A+  L L
Sbjct: 408 LGDCDVTDSGCSSLA-TVLLANRSLRELDLSNNCMGDTGVLQLLESLK-QPSCALQQLVL 465

Query: 598 ANNFLT 603
            + + T
Sbjct: 466 YDIYWT 471



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 3/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +F + G+  L + L  +    E +     GIT+A  K    V+ S  +L+ 
Sbjct: 203 FKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQE 262

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+L  N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+    L+ L L
Sbjct: 263 LDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSL 322

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N +   G   L E+LLE    + SL +      A         L  N+SL EL +  N
Sbjct: 323 AGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSN 382

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD G+  L   L      L VL +G+  ++  G   +A  +   +SL  ++L  N +G
Sbjct: 383 PLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMG 442

Query: 401 DEGAEKIADALKQ 413
           D G  ++ ++LKQ
Sbjct: 443 DTGVLQLLESLKQ 455



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 179/436 (41%), Gaps = 31/436 (7%)

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL----QLSSVDLRDEG-- 262
           +  G+L +  ++ T  L   P     ++C  + L D    E L    Q   V L D G  
Sbjct: 15  SLPGLLNTWQSVWTRRLHCAPTMSLDIQC--EQLSDARWTELLPLIQQYQVVRLDDCGLT 72

Query: 263 ---AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST--IRSLHLNGNYGGAL 317
               K I   ++ N  L  L L  N +  +G   + + L +N T  I+ L L        
Sbjct: 73  EVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEA 131

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L   L    +LRELHL+ N +GDEG++ L  GL   + +L  L +   +++A    
Sbjct: 132 GCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCE 191

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
            +A  ++       + L  ND  + G   +   LK +   + ++ L    I S     + 
Sbjct: 192 PLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLC 251

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
            V+   + +  LDL  N +G  G  AL S +L     + TL L  C + A G + +  +L
Sbjct: 252 DVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVL 311

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY---SLKHMLFYSLCINYLQGAKCLA 552
           R   ++  L L  N L+DE      G      ++         L+   C   L  A C  
Sbjct: 312 RAKQSLKELSLAGNELKDE------GAQLLCESLLEPGCQLESLWVKTC--SLTAASCPH 363

Query: 553 -QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
             S    N +L  + ++ N + D G   + +AL    D  +  L L +  +T  G S+L 
Sbjct: 364 FCSVLTKNRSLFELQMSSNPLGDSGVVELCKAL-GYPDTVLRVLWLGDCDVTDSGCSSL- 421

Query: 612 DAKDLVYEMSEKEVNI 627
            A  L+   S +E+++
Sbjct: 422 -ATVLLANRSLRELDL 436



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 5/153 (3%)

Query: 156 EFAKELRAFSSV---DMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
           +  + LRA  S+    ++G    DEG   L ESL       E +      +TAA    F 
Sbjct: 306 DLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFC 365

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELL 270
            VL  N +L  L +S NP+GD GV  LC  L     V R L L   D+ D G  ++A +L
Sbjct: 366 SVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVL 425

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
             N  LR L+L+NN +  +G   L E+L + S 
Sbjct: 426 LANRSLRELDLSNNCMGDTGVLQLLESLKQPSC 458


>gi|405978624|gb|EKC43001.1| Leucine-rich repeat-containing protein 34 [Crassostrea gigas]
          Length = 425

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 155/293 (52%), Gaps = 5/293 (1%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+   + D+ +  L   L +N  V  L L   ++ DEGAK IA+L++ ++ +R + L +N
Sbjct: 56  LTDKRLVDQDMLVLYKTLQNNLYVTSLDLRFNNITDEGAKHIAKLIEESASIRDINLMSN 115

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G   LA AL  N ++++L L GN  G  G  ALA+ L+ N +L  L +    +  
Sbjct: 116 DIGPEGGEILARALQTNESLKALRLTGNKIGNRGGMALAQMLQVNTTLEALDVADCDLTI 175

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSI---SAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           E + AL + L   K  L  L++    +     +   H A+ +K   S+  I+L   D+ D
Sbjct: 176 ESVIALSTVLHQNK-TLKALNVNRPLLFTQQEETTVHYAKMLKVNTSIEEIHLQKYDMRD 234

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA ++A+ L QN T+  ++L  N I   GA  I++VLK+N+ I  LDL YN +  DGA 
Sbjct: 235 FGATRLAENLMQNNTLKCLNLSCNRITRDGALEISKVLKENTAIEVLDLGYNRLEDDGAC 294

Query: 462 ALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            ++E LK ++ N+ TL + +  IG  G   +AD L+ N ++  + +  N L +
Sbjct: 295 HIAEALKTYNTNLQTLVVSFNNIGNKGLCALADALKVNTSLKQIFIWGNKLEE 347



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 148/306 (48%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +S+D+   N  DEG   +A+ +  + +  +++  +N I   G +     LQ+N +LK L 
Sbjct: 80  TSLDLRFNNITDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALR 139

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+GN IG+ G   L  +L  N  +E L ++  DL  E   A++ +L  N  L+ L +N  
Sbjct: 140 LTGNKIGNRGGMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNRP 199

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++           A+ L  N++I  +HL        GA  LA+ L  N +L+ L+L  N 
Sbjct: 200 LLFTQQEETTVHYAKMLKVNTSIEEIHLQKYDMRDFGATRLAENLMQNNTLKCLNLSCNR 259

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIG 400
           I  +G   + S +      + VLD+G N +   GA H+AE +K   + L  + +  N+IG
Sbjct: 260 ITRDGALEI-SKVLKENTAIEVLDLGYNRLEDDGACHIAEALKTYNTNLQTLVVSFNNIG 318

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           ++G   +ADALK N ++  I + GN +      A A +L +N  I   D        DG 
Sbjct: 319 NKGLCALADALKVNTSLKQIFIWGNKLEEPATIAFASLL-ENGRIEPQDTDIRSYVVDGV 377

Query: 461 KALSEV 466
             L E+
Sbjct: 378 TKLCEL 383



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 164/330 (49%), Gaps = 8/330 (2%)

Query: 146 LFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           L +E ++T+ EF + +  + + +   ++ +   D+ +  L ++L  N     +    N I
Sbjct: 30  LEKEKEETVFEFKENMHLYLAGNNQLLTDKRLVDQDMLVLYKTLQNNLYVTSLDLRFNNI 89

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T  G K    +++ + +++ +NL  N IG EG + L   L  N  ++ L+L+   + + G
Sbjct: 90  TDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALRLTGNKIGNRG 149

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA- 321
             A+A++L+ N+ L  L++ +  +      +L+  L +N T+++L++N            
Sbjct: 150 GMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNRPLLFTQQEETT 209

Query: 322 --LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
              AK L+ N S+ E+HL    + D G   L   L  +   L  L++  N I+  GA  +
Sbjct: 210 VHYAKMLKVNTSIEEIHLQKYDMRDFGATRLAENLM-QNNTLKCLNLSCNRITRDGALEI 268

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARV 438
           ++ +K   ++  ++L  N + D+GA  IA+ALK  N  + T+ +  NNI +KG  A+A  
Sbjct: 269 SKVLKENTAIEVLDLGYNRLEDDGACHIAEALKTYNTNLQTLVVSFNNIGNKGLCALADA 328

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           LK N+ +  + +  N +      A + +L+
Sbjct: 329 LKVNTSLKQIFIWGNKLEEPATIAFASLLE 358



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 13/255 (5%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N+I+ +GA H+A+ I+   S+  INL  NDIG EG E +A AL+ N ++  + L 
Sbjct: 82  LDLRFNNITDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALRLT 141

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I ++G  A+A++L+ N+ + +LD+A   +  +   ALS VL  +  +  L +    +
Sbjct: 142 GNKIGNRGGMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNRPLL 201

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
                E     A ML+ N +I  + L+   +RD    G   L+       +LK +   +L
Sbjct: 202 FTQQEETTVHYAKMLKVNTSIEEIHLQKYDMRD---FGATRLAENLMQNNTLKCL---NL 255

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
             N +   GA  +++  K  N A+  +DL +N + DDGA  IA+ALK   +  + +L ++
Sbjct: 256 SCNRITRDGALEISKVLK-ENTAIEVLDLGYNRLEDDGACHIAEALKT-YNTNLQTLVVS 313

Query: 599 NNFLTKFGQSALTDA 613
            N +   G  AL DA
Sbjct: 314 FNNIGNKGLCALADA 328



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 10/200 (5%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+ N  +T++DL  NNI  +GA  IA+++++++ I  ++L  N IG +G + L+  L+ 
Sbjct: 72  TLQNNLYVTSLDLRFNNITDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQT 131

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI 529
           + ++  L+L   +IG  G   +A ML+ N T+  LD+    L  E     + +   +  +
Sbjct: 132 NESLKALRLTGNKIGNRGGMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTL 191

Query: 530 YSL---KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
            +L   + +LF       +  AK L      VN ++  I L   ++RD GA  +A+ L  
Sbjct: 192 KALNVNRPLLFTQQEETTVHYAKMLK-----VNTSIEEIHLQKYDMRDFGATRLAENLMQ 246

Query: 587 NEDVAVTSLNLANNFLTKFG 606
           N    +  LNL+ N +T+ G
Sbjct: 247 NN--TLKCLNLSCNRITRDG 264


>gi|301104398|ref|XP_002901284.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101218|gb|EEY59270.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1160

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 3/235 (1%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           L+L    L D   + + ++L +  S LR L+L  N +  +G T LAEAL  N+++ SL+L
Sbjct: 103 LKLGGFSLGDACTRVLGDVLAHGASRLRTLDLGFNRLTDTGATHLAEALETNTSLESLYL 162

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           +GN  G  GA ALA+ L  N  LR LHL GN+IG+EG R L  G++     L  L +G N
Sbjct: 163 SGNEIGPAGARALAQALIKNTHLRSLHLSGNNIGEEGARVLADGIAGNT-SLRALYMGTN 221

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIH 428
            I A G   +A  + + KSL  + L  N +G  G   +A A       ++T++LG N + 
Sbjct: 222 GIGATGMQSLATALTHNKSLEELTLGQNKVGSAGVRHLAAAFATGHVALSTLELGKNGVD 281

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            +GA A+AR L   + + +L + +NP+G  GA A   +L  +  +  L L +  +
Sbjct: 282 QEGAIALARSLCGANRLQNLYMDHNPLGDVGASAFGALLAQNTELRVLDLSYTHM 336



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 130/246 (52%), Gaps = 3/246 (1%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L L G  +GD   + L D+L   A   R L L    L D GA  +AE L+ N+ L  L L
Sbjct: 103 LKLGGFSLGDACTRVLGDVLAHGASRLRTLDLGFNRLTDTGATHLAEALETNTSLESLYL 162

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I  +G  +LA+AL++N+ +RSLHL+GN  G  GA  LA G+ GN SLR L++  N 
Sbjct: 163 SGNEIGPAGARALAQALIKNTHLRSLHLSGNNIGEEGARVLADGIAGNTSLRALYMGTNG 222

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYMNDIG 400
           IG  G+++L + L+  K  L  L +G N + + G  H+A  +     +L  + L  N + 
Sbjct: 223 IGATGMQSLATALTHNK-SLEELTLGQNKVGSAGVRHLAAAFATGHVALSTLELGKNGVD 281

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            EGA  +A +L     +  + +  N +   GASA   +L  N+ +  LDL+Y  +   G 
Sbjct: 282 QEGAIALARSLCGANRLQNLYMDHNPLGDVGASAFGALLAQNTELRVLDLSYTHMSLLGL 341

Query: 461 KALSEV 466
           + LS V
Sbjct: 342 RELSVV 347



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 4/205 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+TL+L  N + D G   L + L  N  +E L LS  ++   GA+A+A+ L  N+ LR L
Sbjct: 129 LRTLDLGFNRLTDTGATHLAEALETNTSLESLYLSGNEIGPAGARALAQALIKNTHLRSL 188

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ N I   G   LA+ +  N+++R+L++  N  GA G  +LA  L  NKSL EL L  
Sbjct: 189 HLSGNNIGEEGARVLADGIAGNTSLRALYMGTNGIGATGMQSLATALTHNKSLEELTLGQ 248

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM--N 397
           N +G  G+R L +  ++    L+ L++G N +  +GA  +A  +  C +    NLYM  N
Sbjct: 249 NKVGSAGVRHLAAAFATGHVALSTLELGKNGVDQEGAIALARSL--CGANRLQNLYMDHN 306

Query: 398 DIGDEGAEKIADALKQNRTITTIDL 422
            +GD GA      L QN  +  +DL
Sbjct: 307 PLGDVGASAFGALLAQNTELRVLDL 331



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 1/181 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L G S+GD   R L   L+    +L  LD+G N ++  GA H+AE ++   SL  + L
Sbjct: 103 LKLGGFSLGDACTRVLGDVLAHGASRLRTLDLGFNRLTDTGATHLAEALETNTSLESLYL 162

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+IG  GA  +A AL +N  + ++ L GNNI  +GA  +A  +  N+ + +L +  N 
Sbjct: 163 SGNEIGPAGARALAQALIKNTHLRSLHLSGNNIGEEGARVLADGIAGNTSLRALYMGTNG 222

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRD 513
           IGA G ++L+  L  + ++  L LG  ++G++G   +A      +  +S L+L  NG+  
Sbjct: 223 IGATGMQSLATALTHNKSLEELTLGQNKVGSAGVRHLAAAFATGHVALSTLELGKNGVDQ 282

Query: 514 E 514
           E
Sbjct: 283 E 283



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-NIALKTLNLSG 227
           M     G  G+  LA +L +N++ EE++   N + +AG++       + ++AL TL L  
Sbjct: 218 MGTNGIGATGMQSLATALTHNKSLEELTLGQNKVGSAGVRHLAAAFATGHVALSTLELGK 277

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N +  EG   L   L     ++ L +    L D GA A   LL  N+ LRVL+L+   + 
Sbjct: 278 NGVDQEGAIALARSLCGANRLQNLYMDHNPLGDVGASAFGALLAQNTELRVLDLSYTHMS 337

Query: 288 YSGFTSLAEALLENSTI 304
             G   L+   L  S +
Sbjct: 338 LLGLRELSVVGLARSRV 354


>gi|312796130|ref|YP_004029052.1| hypothetical protein RBRH_03696 [Burkholderia rhizoxinica HKI 454]
 gi|312167905|emb|CBW74908.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 608

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 201/442 (45%), Gaps = 38/442 (8%)

Query: 191 TAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGV 248
           T   +  + N I+A   K+  D +   N  L +LNL+   I   G + L   L   N  +
Sbjct: 171 TITSLDLSNNPISAKSAKSLADALCDPNCQLTSLNLNHCGISRRGAQHLGRALTHPNCKL 230

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENST-IRS 306
             L L +    DEGA  + + L N    L  L+L  N +  +    L+  L +++  + S
Sbjct: 231 TSLSLYANRTGDEGAAPVIQALANEHCKLESLDLGRNSLQEASAEQLSRVLGDSACKLVS 290

Query: 307 LHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           L+L+ N+    G   LA+ L   +  L  L L  N + D  I +L + L+   G L  LD
Sbjct: 291 LNLSSNHINDEGVAHLARMLSNQRCGLTMLSLRDNGVSDRSIASLCAALTHPGGSLTALD 350

Query: 366 IGNNSISAKGAFHVAEYIKN--CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDL 422
           +GNN IS  GA HV + + N  CK L  ++L  N+I D G   IA AL      +T++D+
Sbjct: 351 LGNNRISEAGAEHVGQALANSHCK-LAGLSLRQNNIADGGVRHIARALTNPHCKLTSLDV 409

Query: 423 GGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNIN--TLKLG 479
           G N I ++GA  + R L +    +TSLDL  N IGADG K +++ L  H N    +L LG
Sbjct: 410 GSNGISAQGAEHLGRALGNAGCQLTSLDLQGNQIGADGTKHVADPLS-HPNCKLVSLGLG 468

Query: 480 WCQIGASGAEFVADMLR-YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
              IG  GA  +A  +R  N  +  L+L  N             +  H  +  +   L +
Sbjct: 469 SNNIGNEGAAHMARAIRDANCKVVSLNLAFN-------------AIDHRGVEQVSRALAH 515

Query: 539 SLC-INYL---------QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
             C +  L         QG + L     + N  L S+DL   EI D+GA  +   L    
Sbjct: 516 PNCKVTSLDLSSNAIGAQGVEHLGVPLGLANCRLRSLDLMDTEIDDEGALRLIDVLH-RR 574

Query: 589 DVAVTSLNLANNFLTKFGQSAL 610
              + SLN+ +N ++   +S L
Sbjct: 575 AYRLASLNMEDNPISPEVRSQL 596



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 142/340 (41%), Gaps = 77/340 (22%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI------------------ 383
           +G+  ++ L   L S    +  LD+ NN ISAK A  +A+ +                  
Sbjct: 153 VGELKVQQLADLLRSPDCTITSLDLSNNPISAKSAKSLADALCDPNCQLTSLNLNHCGIS 212

Query: 384 -------------KNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHS 429
                         NCK L  ++LY N  GDEGA  +  AL  ++  + ++DLG N++  
Sbjct: 213 RRGAQHLGRALTHPNCK-LTSLSLYANRTGDEGAAPVIQALANEHCKLESLDLGRNSLQE 271

Query: 430 KGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFH------------------ 470
             A  ++RVL D++  + SL+L+ N I  +G   L+ +L                     
Sbjct: 272 ASAEQLSRVLGDSACKLVSLNLSSNHINDEGVAHLARMLSNQRCGLTMLSLRDNGVSDRS 331

Query: 471 ------------GNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEVCS 517
                       G++  L LG  +I  +GAE V   L  ++  ++ L LR N + D    
Sbjct: 332 IASLCAALTHPGGSLTALDLGNNRISEAGAEHVGQALANSHCKLAGLSLRQNNIAD---- 387

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCIN----YLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
              G+     A+ +  H    SL +       QGA+ L ++       LTS+DL  N+I 
Sbjct: 388 --GGVRHIARALTN-PHCKLTSLDVGSNGISAQGAEHLGRALGNAGCQLTSLDLQGNQIG 444

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            DG   +A  L ++ +  + SL L +N +   G + +  A
Sbjct: 445 ADGTKHVADPL-SHPNCKLVSLGLGSNNIGNEGAAHMARA 483


>gi|291227715|ref|XP_002733824.1| PREDICTED: nucleotide-binding oligomerization domain containing
           1-like [Saccoglossus kowalevskii]
          Length = 418

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 154/297 (51%), Gaps = 5/297 (1%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + D+ ++ L + L +NA +  + L   ++ D GA+ IA+LL+   +LR + L  N I  +
Sbjct: 67  LTDDDMRPLYETLKNNAYIHSMDLRYNNIGDTGAEYIAKLLEETVVLRSVNLMCNDIGEA 126

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A+A   N T+ SL LNGN  G  G  A A  L+ N +L EL L     G E + A
Sbjct: 127 GAKVIAKAFQTNETLVSLKLNGNKIGNKGGMAFAGVLQVNNTLEELDLGDTDQGTESVIA 186

Query: 350 LMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           L + L+  K  +  L++      S   +   H+A  +K   +L  ++L   DI D GAE+
Sbjct: 187 LATVLNQNKS-IRALNVNRPLLFSHQEETTVHMARMLKVTSTLQELHLQKCDIRDFGAER 245

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           ++DAL  N ++  +D+  N I   GA  ++++LK N+ +  LDL +N I  DGAK L++ 
Sbjct: 246 LSDALIDNSSLKYLDVSCNRITRDGAKHLSKLLKHNTPLQILDLGFNRIEDDGAKHLADA 305

Query: 467 L-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           L +F+  +  L +   QI   G   +A  ++ N +++ + +  N L    C   N L
Sbjct: 306 LGQFNTCLTHLVITTNQIKGPGVCAIAKAMKLNISLNNVYIWGNNLETPACVAFNEL 362



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 153/354 (43%), Gaps = 12/354 (3%)

Query: 119 RPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEG 178
           R  K   + M+  +    +L++    +L  +  + L E  K      S+D+   N GD G
Sbjct: 42  RKGKEPKDYMDLVLPGNNHLITNI--RLTDDDMRPLYETLKNNAYIHSMDLRYNNIGDTG 99

Query: 179 LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL 238
             ++A+ L        V+   N I  AG K      Q+N  L +L L+GN IG++G    
Sbjct: 100 AEYIAKLLEETVVLRSVNLMCNDIGEAGAKVIAKAFQTNETLVSLKLNGNKIGNKGGMAF 159

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLA 295
             +L  N  +E L L   D   E   A+A +L  N  +R L +N  ++          +A
Sbjct: 160 AGVLQVNNTLEELDLGDTDQGTESVIALATVLNQNKSIRALNVNRPLLFSHQEETTVHMA 219

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             L   ST++ LHL        GA  L+  L  N SL+ L +  N I  +G + L S L 
Sbjct: 220 RMLKVTSTLQELHLQKCDIRDFGAERLSDALIDNSSLKYLDVSCNRITRDGAKHL-SKLL 278

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYI---KNCKSLLWINLYMNDIGDEGAEKIADALK 412
                L +LD+G N I   GA H+A+ +     C + L I    N I   G   IA A+K
Sbjct: 279 KHNTPLQILDLGFNRIEDDGAKHLADALGQFNTCLTHLVIT--TNQIKGPGVCAIAKAMK 336

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
            N ++  + + GNN+ +    A   ++ +   +   +    P   DG   LSE+
Sbjct: 337 LNISLNNVYIWGNNLETPACVAFNELI-ETERLDQRNTDVKPYVVDGVVYLSEI 389



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 22/305 (7%)

Query: 324 KGLEGNKSLRELHLHGNS-------IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           KG E  K   +L L GN+       + D+ +R L   L +    +  +D+  N+I   GA
Sbjct: 43  KGKEP-KDYMDLVLPGNNHLITNIRLTDDDMRPLYETLKN-NAYIHSMDLRYNNIGDTGA 100

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            ++A+ ++    L  +NL  NDIG+ GA+ IA A + N T+ ++ L GN I +KG  A A
Sbjct: 101 EYIAKLLEETVVLRSVNLMCNDIGEAGAKVIAKAFQTNETLVSLKLNGNKIGNKGGMAFA 160

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE---FVAD 493
            VL+ N+ +  LDL     G +   AL+ VL  + +I  L +    + +   E    +A 
Sbjct: 161 GVLQVNNTLEELDLGDTDQGTESVIALATVLNQNKSIRALNVNRPLLFSHQEETTVHMAR 220

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCL 551
           ML+  +T+  L L+   +RD    G   LS    A+     + +  +  N +   GAK L
Sbjct: 221 MLKVTSTLQELHLQKCDIRD---FGAERLS---DALIDNSSLKYLDVSCNRITRDGAKHL 274

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
           ++  K  N  L  +DL FN I DDGA  +A AL    +  +T L +  N +   G  A+ 
Sbjct: 275 SKLLK-HNTPLQILDLGFNRIEDDGAKHLADAL-GQFNTCLTHLVITTNQIKGPGVCAIA 332

Query: 612 DAKDL 616
            A  L
Sbjct: 333 KAMKL 337


>gi|320165994|gb|EFW42893.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 434

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 129/246 (52%), Gaps = 29/246 (11%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LS  ++ D  A+AIA  LK N+ L  L+L+ N I   G  ++AEAL  N T+ SL L  N
Sbjct: 28  LSDDEIGDAEAQAIAAALKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKN 87

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA A+A+ L+ N +L +L+L  N +GD+  +A                       
Sbjct: 88  QTGDAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAF---------------------- 125

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
                  AE +K  K+L  + L+   IGD GA  IA+ALK N+T+T + L GN I   GA
Sbjct: 126 -------AEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDGNQIGDVGA 178

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  LK N  +T+LDL+ N IG  GA+A++E +K    + TL L    I ++ A+ + 
Sbjct: 179 QAIAEALKTNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLTTLDLSNNCIDSAVAQLII 238

Query: 493 DMLRYN 498
           +  + N
Sbjct: 239 EANKLN 244



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 35/218 (16%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K   +L  ++L  N IG+ GA+ IA+ALK N+T+T++ LG N     GA AIA  LK N
Sbjct: 45  LKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVN 104

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +T L+L++N +G D AKA +E LK +  +  LKL   QIG +GA  +A+ L+ N T++
Sbjct: 105 TTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVT 164

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            L L  N + D                                 GA+ +A++ K  N+ L
Sbjct: 165 ELALDGNQIGD--------------------------------VGAQAIAEALKT-NKTL 191

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           T++DL+ N+I D GA AI +A+K      +T+L+L+NN
Sbjct: 192 TALDLSLNQIGDAGAQAITEAIKVG--TTLTTLDLSNN 227



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 1/184 (0%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L +L L  N IG+ G +A+   L S K  L  L +G N     GA  +AE +K 
Sbjct: 45  LKVNTTLTQLDLSENQIGNVGAQAIAEALKSNK-TLTSLSLGKNQTGDAGAQAIAEALKV 103

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L  +NL  N +GD+ A+  A+ALK N+T+T + L    I   GA AIA  LK N  +
Sbjct: 104 NTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTV 163

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T L L  N IG  GA+A++E LK +  +  L L   QIG +GA+ + + ++   T++ LD
Sbjct: 164 TELALDGNQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLTTLD 223

Query: 506 LRAN 509
           L  N
Sbjct: 224 LSNN 227



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 110/222 (49%), Gaps = 29/222 (13%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L  L+LS N IG+ G + + + L  N  +  L L      D GA+AIAE LK N
Sbjct: 45  LKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVN 104

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L L+ N +      + AEAL  N T+  L L+    G  GA A+A+ L+ NK++ 
Sbjct: 105 TTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVT 164

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L GN IGD G +A                             +AE +K  K+L  ++
Sbjct: 165 ELALDGNQIGDVGAQA-----------------------------IAEALKTNKTLTALD 195

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           L +N IGD GA+ I +A+K   T+TT+DL  N I S  A  I
Sbjct: 196 LSLNQIGDAGAQAITEAIKVGTTLTTLDLSNNCIDSAVAQLI 237



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 1/213 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD     +A +L  N T  ++  + N I   G +A    L+SN  L +L+L  N
Sbjct: 28  LSDDEIGDAEAQAIAAALKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKN 87

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
             GD G + + + L  N  + +L LS   + D+ AKA AE LK N  L  L+L+   I  
Sbjct: 88  QTGDAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGD 147

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++AEAL  N T+  L L+GN  G +GA A+A+ L+ NK+L  L L  N IGD G +
Sbjct: 148 AGARAIAEALKVNKTVTELALDGNQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQ 207

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           A+   +      L  LD+ NN I +  A  + E
Sbjct: 208 AITEAIKV-GTTLTTLDLSNNCIDSAVAQLIIE 239



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 87/153 (56%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  LD+  N I   GA  +AE +K+ K+L  ++L  N  GD GA+ IA+ALK N T+T +
Sbjct: 51  LTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTKL 110

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +L  N +    A A A  LK N  +T L L    IG  GA+A++E LK +  +  L L  
Sbjct: 111 NLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDG 170

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            QIG  GA+ +A+ L+ N T++ LDL  N + D
Sbjct: 171 NQIGDVGAQAIAEALKTNKTLTALDLSLNQIGD 203



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 35/217 (16%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           ++IGD  A+ IA ALK N T+T +DL  N I + GA AIA  LK N  +TSL L  N  G
Sbjct: 31  DEIGDAEAQAIAAALKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTG 90

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             GA+A++E LK +  +  L L W Q+G   A+  A+ L+ N T++ L L    + D   
Sbjct: 91  DAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDA-- 148

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
                                         GA+ +A++ KV N+ +T + L  N+I D G
Sbjct: 149 ------------------------------GARAIAEALKV-NKTVTELALDGNQIGDVG 177

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           A AIA+ALK N+   +T+L+L+ N +   G  A+T+A
Sbjct: 178 AQAIAEALKTNK--TLTALDLSLNQIGDAGAQAITEA 212



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 93/179 (51%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+S    G+ G   +AE+L  N+T   +S   N    AG +A    L+ N  L  L
Sbjct: 51  LTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTKL 110

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N +GD+  K   + L  N  + RL+L  V + D GA+AIAE LK N  +  L L+ 
Sbjct: 111 NLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDG 170

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           N I   G  ++AEAL  N T+ +L L+ N  G  GA A+ + ++   +L  L L  N I
Sbjct: 171 NQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLTTLDLSNNCI 229



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 80/161 (49%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +  +S+ +     GD G   +AE+L  N T  +++ + N +     KAF 
Sbjct: 67  QAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFA 126

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L L    IGD G + + + L  N  V  L L    + D GA+AIAE LK
Sbjct: 127 EALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDGNQIGDVGAQAIAEALK 186

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N  L  L+L+ N I  +G  ++ EA+   +T+ +L L+ N
Sbjct: 187 TNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLTTLDLSNN 227



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 35/147 (23%)

Query: 157 FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           FA+ L+     + + +     GD G   +AE+L  N+T  E++   N I   G +A    
Sbjct: 125 FAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDGNQIGDVGAQAIAEA 184

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L  L+LS N IG                            D GA+AI E +K  
Sbjct: 185 LKTNKTLTALDLSLNQIG----------------------------DAGAQAITEAIKVG 216

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLE 300
           + L  L+L+NN ID    +++A+ ++E
Sbjct: 217 TTLTTLDLSNNCID----SAVAQLIIE 239


>gi|428167726|gb|EKX36680.1| hypothetical protein GUITHDRAFT_155158 [Guillardia theta CCMP2712]
          Length = 350

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 140/282 (49%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           T++L+   IG  G   L D+L  N+ V+ L L    L   GA  IA +L  N+ L+ L+L
Sbjct: 15  TVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLHTNTTLQTLDL 74

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I+  G T+LAEA+  N+T+  L L  N   + GA  +A  L  N SL+ L    N 
Sbjct: 75  ASNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNTSLQYLGFAFNG 134

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            GD G   L   L+ +   L  LD+G N +   GA  +A  +     L  + L  N I D
Sbjct: 135 FGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALACGLTKNHWLETLELGYNGITD 194

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA ++A A++ N  +T++ +  N I   GA+ +A  L+DN  +  + L+ N IG  GAK
Sbjct: 195 AGALELARAMRTNTVLTSLGVPSNGISDAGAAELANALRDNCTLVQVGLSSNSIGNKGAK 254

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            L++VL  +  + TL L    +   G   VA      NT  I
Sbjct: 255 ELADVLNMNYALETLYLEENDVDEDGEGAVALRKVVKNTFKI 296



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 155/329 (47%), Gaps = 38/329 (11%)

Query: 157 FAKELRAFS---SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           + + LR F    +VD++    G  G   L + L +N T + +      + A G      +
Sbjct: 3   WVENLRRFGLQGTVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARM 62

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L +N  L+TL+L+ N I D G   L + +  N  + +L+L    +  EGA+ IA+ L+ N
Sbjct: 63  LHTNTTLQTLDLASNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQN 122

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L+ L    N    +G T LAE L   +T                           +L+
Sbjct: 123 TSLQYLGFAFNGFGDAGATHLAEVLAGQNT---------------------------TLK 155

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           +L L  N +  +G RAL  GL ++   L  L++G N I+  GA  +A  ++    L  + 
Sbjct: 156 QLDLGFNGVCTDGARALACGL-TKNHWLETLELGYNGITDAGALELARAMRTNTVLTSLG 214

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N I D GA ++A+AL+ N T+  + L  N+I +KGA  +A VL  N  + +L L  N
Sbjct: 215 VPSNGISDAGAAELANALRDNCTLVQVGLSSNSIGNKGAKELADVLNMNYALETLYLEEN 274

Query: 454 PIGAD--GAKALSEVLKFHGNINTLKLGW 480
            +  D  GA AL +V+K     NT K+ W
Sbjct: 275 DVDEDGEGAVALRKVVK-----NTFKIKW 298



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 148/307 (48%), Gaps = 39/307 (12%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            ++LN+  I   G   L + L  NST+  L L     GA+GA  +A+ L  N +L+    
Sbjct: 15  TVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLHTNTTLQ---- 70

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
                                     LD+ +N+I  +GA  +AE IK   +L+ + L  N
Sbjct: 71  -------------------------TLDLASNAIEDRGATALAEAIKVNNTLVKLELQRN 105

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIG 456
            I  EGA  IADAL+QN ++  +    N     GA+ +A VL   N+ +  LDL +N + 
Sbjct: 106 GISSEGARYIADALRQNTSLQYLGFAFNGFGDAGATHLAEVLAGQNTTLKQLDLGFNGVC 165

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            DGA+AL+  L  +  + TL+LG+  I  +GA  +A  +R N  ++ L + +NG+ D   
Sbjct: 166 TDGARALACGLTKNHWLETLELGYNGITDAGALELARAMRTNTVLTSLGVPSNGISDA-- 223

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
               G +   +A+     ++   L  N +  +GAK LA    + N AL ++ L  N++ +
Sbjct: 224 ----GAAELANALRDNCTLVQVGLSSNSIGNKGAKELADVLNM-NYALETLYLEENDVDE 278

Query: 575 DGAFAIA 581
           DG  A+A
Sbjct: 279 DGEGAVA 285



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 118/231 (51%), Gaps = 24/231 (10%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L    IG  GA ++ D L  N T+  +DL    + + GA+ IAR+L  N+ + +LDLA
Sbjct: 16  VDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLHTNTTLQTLDLA 75

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I   GA AL+E +K +  +  L+L    I + GA ++AD LR N ++  L    NG 
Sbjct: 76  SNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNTSLQYLGFAFNGF 135

Query: 512 RD-------EVCSGCNGLSFFHSAIYSLKHML--FYSLCINYLQGAKCLAQSFKVVNEAL 562
            D       EV +G N          +LK +   F  +C +   GA+ LA      N  L
Sbjct: 136 GDAGATHLAEVLAGQN---------TTLKQLDLGFNGVCTD---GARALACGL-TKNHWL 182

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +++L +N I D GA  +A+A++ N    +TSL + +N ++  G + L +A
Sbjct: 183 ETLELGYNGITDAGALELARAMRTN--TVLTSLGVPSNGISDAGAAELANA 231



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 14/149 (9%)

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           E L+  G   T+ L   +IG  GA  + D+L +N+T+  LDLR      +   G  G + 
Sbjct: 5   ENLRRFGLQGTVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLR------DTILGAVGATH 58

Query: 525 FHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
               +++   +    L  N ++  GA  LA++ K VN  L  ++L  N I  +GA  IA 
Sbjct: 59  IARMLHTNTTLQTLDLASNAIEDRGATALAEAIK-VNNTLVKLELQRNGISSEGARYIAD 117

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALT 611
           AL+ N     TSL         FG +  T
Sbjct: 118 ALRQN-----TSLQYLGFAFNGFGDAGAT 141


>gi|348672500|gb|EGZ12320.1| hypothetical protein PHYSODRAFT_514884 [Phytophthora sojae]
          Length = 684

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 162/338 (47%), Gaps = 12/338 (3%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           T NE  K+ R   +V++SGR        FL + + ++     V+  +  I  A  +A   
Sbjct: 280 TANE--KDHRDLVTVNLSGRPLELYEAAFLGKKMLHHLHLGRVALNSCMIDGAAARALAD 337

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            ++++  L TL L  NP+G  G + L + L  ++ +  L LS   L D+G  A  E L  
Sbjct: 338 GVRNHATLHTLELENNPLGPTGGQALAECLAVSSALTYLNLSWTQLGDDGVMAFREALTR 397

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  +  L+L  N +   G  ++AE L   +T+R LHL  N     GA ALA  LE N+SL
Sbjct: 398 NKSIERLDLRGNELRVRGVVAIAEGLRRTATLRELHLRWNTVSPAGAEALAVALEVNQSL 457

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS---------ISAKGAFHVAEYI 383
             L +  +++G  G  A  S L+  K    +   G +S         IS++ A  +AE +
Sbjct: 458 HLLDIEHHTMGARGAAAFASMLARNKHLEHLNMCGTDSDDALDAGPGISSEQAQRIAEAL 517

Query: 384 KNC-KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            N  +SL  +++  N I  + A +  + LK N+T+  +DL  + + +K A      L  N
Sbjct: 518 ANSNRSLRILHVGANRIDTDAAARFGELLKFNKTLVALDLSRSGLDAKKAPRFFACLSVN 577

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           + +  L+LAYN IG +G  A    L+ +  +  L L +
Sbjct: 578 TTLERLNLAYNRIGNEGLVACMRALETNRTLRELSLAY 615



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 178/384 (46%), Gaps = 25/384 (6%)

Query: 155 NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS--------FAANGITAAG 206
           N  A E+    +  ++ ++F D   + LA+ L  N+  +E++         +A      G
Sbjct: 221 NRRAGEVPDMMAFTVASKHFLD--FWVLAKCLAVNRITQELNELRLPATSSSAKAAAIVG 278

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           + A +   + +  L T+NLSG P+       L   ++ +  + R+ L+S  +    A+A+
Sbjct: 279 VTANE---KDHRDLVTVNLSGRPLELYEAAFLGKKMLHHLHLGRVALNSCMIDGAAARAL 335

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           A+ ++N++ L  LEL NN +  +G  +LAE L  +S +  L+L+    G  G  A  + L
Sbjct: 336 ADGVRNHATLHTLELENNPLGPTGGQALAECLAVSSALTYLNLSWTQLGDDGVMAFREAL 395

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             NKS+  L L GN +   G+ A+  GL  R   L  L +  N++S  GA  +A  ++  
Sbjct: 396 TRNKSIERLDLRGNELRVRGVVAIAEGLR-RTATLRELHLRWNTVSPAGAEALAVALEVN 454

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN----------IHSKGASAIA 436
           +SL  +++  + +G  GA   A  L +N+ +  +++ G +          I S+ A  IA
Sbjct: 455 QSLHLLDIEHHTMGARGAAAFASMLARNKHLEHLNMCGTDSDDALDAGPGISSEQAQRIA 514

Query: 437 RVLKD-NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
             L + N  +  L +  N I  D A    E+LKF+  +  L L    + A  A      L
Sbjct: 515 EALANSNRSLRILHVGANRIDTDAAARFGELLKFNKTLVALDLSRSGLDAKKAPRFFACL 574

Query: 496 RYNNTISILDLRANGLRDEVCSGC 519
             N T+  L+L  N + +E    C
Sbjct: 575 SVNTTLERLNLAYNRIGNEGLVAC 598



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 42/316 (13%)

Query: 328 GNKSLRELHL-----HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           G K L  LHL     +   I     RAL  G+ +    L  L++ NN +   G   +AE 
Sbjct: 308 GKKMLHHLHLGRVALNSCMIDGAAARALADGVRN-HATLHTLELENNPLGPTGGQALAEC 366

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +    +L ++NL    +GD+G     +AL +N++I  +DL GN +  +G  AIA  L+  
Sbjct: 367 LAVSSALTYLNLSWTQLGDDGVMAFREALTRNKSIERLDLRGNELRVRGVVAIAEGLRRT 426

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +  L L +N +   GA+AL+  L+ + +++ L +    +GA GA   A ML  N  + 
Sbjct: 427 ATLRELHLRWNTVSPAGAEALAVALEVNQSLHLLDIEHHTMGARGAAAFASMLARNKHLE 486

Query: 503 ILDL------------------RANGLRDEVCSGCNGLSFFH--------SAIYSLKHML 536
            L++                  +A  + + + +    L   H         A      +L
Sbjct: 487 HLNMCGTDSDDALDAGPGISSEQAQRIAEALANSNRSLRILHVGANRIDTDAAARFGELL 546

Query: 537 FYSLCINYLQ------GAKCLAQSFKV--VNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
            ++  +  L        AK   + F    VN  L  ++LA+N I ++G  A  +AL+ N 
Sbjct: 547 KFNKTLVALDLSRSGLDAKKAPRFFACLSVNTTLERLNLAYNRIGNEGLVACMRALETNR 606

Query: 589 DVAVTSLNLANNFLTK 604
              +  L+LA N +T+
Sbjct: 607 --TLRELSLAYNGMTE 620



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 107/475 (22%), Positives = 191/475 (40%), Gaps = 85/475 (17%)

Query: 167 VDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +D++ R+   G +G   L  +L  N+T     F+ N +    +      L+ N AL+ L 
Sbjct: 3   IDLNLRDNRLGAQGAEELGRALRENETLTRCDFSWNQMGPHAVLGLLSALRDNFALRELC 62

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD-----LRDEGAKAIAELLKNNSILRVL 279
           + G  + ++G   L ++  D+A    + L  V+      R  GA+A+  + K  +   + 
Sbjct: 63  VYGRDLAEDGTHYLANLDYDSAKRIVVALRHVNESFAVARLTGARAMLPIDKMKTSRWIH 122

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG-GALGANALAKGLEGNKSLRELHLH 338
             +  +++  G   +A  +  NS + SL L+ N G G      L   +    +LR++ L 
Sbjct: 123 LADRELVELDGLV-IAGLIPRNSMLLSLDLHDNPGLGRAAVLGLLSVIRRCPTLRDVDLS 181

Query: 339 --------GNSIGDEGIRALMSGLSSRKGKLAVLDI----GNN---SISAKGAFHVAEYI 383
                   G S+G+  +  L S L + K    V  +    GN     +    AF VA   
Sbjct: 182 NTGLFPDAGESLGE--LVVLNSTLETIKLHETVFAVQQLRGNRRAGEVPDMMAFTVAS-- 237

Query: 384 KNCKSLL--WI---NLYMNDIGDEGAE-KIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
              K  L  W+    L +N I  E  E ++       +    + +  N            
Sbjct: 238 ---KHFLDFWVLAKCLAVNRITQELNELRLPATSSSAKAAAIVGVTANE----------- 283

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
             KD+  + +++L+  P+    A  L + +  H ++  + L  C I  + A  +AD +R 
Sbjct: 284 --KDHRDLVTVNLSGRPLELYEAAFLGKKMLHHLHLGRVALNSCMIDGAAARALADGVRN 341

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV 557
           + T+  L+L  N L      G  G                          A+CLA     
Sbjct: 342 HATLHTLELENNPL------GPTGGQAL----------------------AECLA----- 368

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           V+ ALT ++L++ ++ DDG  A  +AL  N+  ++  L+L  N L   G  A+ +
Sbjct: 369 VSSALTYLNLSWTQLGDDGVMAFREALTRNK--SIERLDLRGNELRVRGVVAIAE 421



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 38/76 (50%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L+ +NL  N +G +GAE++  AL++N T+T  D   N +       +   L+DN  +  L
Sbjct: 2   LIDLNLRDNRLGAQGAEELGRALRENETLTRCDFSWNQMGPHAVLGLLSALRDNFALREL 61

Query: 449 DLAYNPIGADGAKALS 464
            +    +  DG   L+
Sbjct: 62  CVYGRDLAEDGTHYLA 77


>gi|320165055|gb|EFW41954.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 426

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L++N I  +   ++AEAL  N+T+  + L  N  G  GA A+A+ L  N +L+EL LH
Sbjct: 25  LDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQIGDAGAQAIAEALRANTTLKELLLH 84

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G +A+   L      L  L +  N I   GA  +AE +K   +L +++L  N 
Sbjct: 85  LNQIGDAGAQAIAEALKV-NNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQ 143

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD GA  IA+AL+ N T+T + L  N I   GA AIA  LK N  +  + L  N IG  
Sbjct: 144 IGDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAEALKVNKTLIRISLDGNQIGDA 203

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A++E LK +  +  L L     G  G++ +                     DE C G
Sbjct: 204 GAQAIAEALKVNTTLTLLFLSRNCFGVFGSQAI---------------------DEACKG 242

Query: 519 CNGLSFF 525
            +G   F
Sbjct: 243 KSGFQLF 249



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/250 (36%), Positives = 129/250 (51%), Gaps = 35/250 (14%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+ +N I    A  +AE +K   +L+ I+L  N IGD GA+ IA+AL+ N T+  + L 
Sbjct: 25  LDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQIGDAGAQAIAEALRANTTLKELLLH 84

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA AIA  LK N+ +T L L  N IG  GA+A++E LK +  ++ + L   QI
Sbjct: 85  LNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQI 144

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G  GA  +A+ LR N+T+++L LR N + D                              
Sbjct: 145 GDGGAWAIAEALRVNSTVTVLSLRHNQIGD------------------------------ 174

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
              GA  +A++ K VN+ L  I L  N+I D GA AIA+ALK N    +T L L+ N   
Sbjct: 175 --GGAWAIAEALK-VNKTLIRISLDGNQIGDAGAQAIAEALKVN--TTLTLLFLSRNCFG 229

Query: 604 KFGQSALTDA 613
            FG  A+ +A
Sbjct: 230 VFGSQAIDEA 239



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 124/254 (48%), Gaps = 9/254 (3%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S +++ E  +EL     +A   +D+     G      +AE+L  N T  ++S   N I  
Sbjct: 3   SYESMTERQRELYDQVKKASGQLDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQIGD 62

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L++N  LK L L  N IGD G + + + L  N  +  L L    + D GA+
Sbjct: 63  AGAQAIAEALRANTTLKELLLHLNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQ 122

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N+ L  + L +N I   G  ++AEAL  NST+  L L  N  G  GA A+A+
Sbjct: 123 AIAEALKANATLSYVHLKHNQIGDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAE 182

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ NK+L  + L GN IGD G +A+   L      L +L +  N     G+  + E   
Sbjct: 183 ALKVNKTLIRISLDGNQIGDAGAQAIAEALKVNT-TLTLLFLSRNCFGVFGSQAIDEA-- 239

Query: 385 NCKSLLWINLYMND 398
            CK      L++ D
Sbjct: 240 -CKGKSGFQLFLRD 252



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 111/231 (48%), Gaps = 31/231 (13%)

Query: 285 MIDYSGFTSLAEALLENSTIRS--LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           M+ Y   T     L +     S  L L+ N  G   A A+A+ L+ N +L ++ L  N I
Sbjct: 1   MLSYESMTERQRELYDQVKKASGQLDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQI 60

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A                             +AE ++   +L  + L++N IGD 
Sbjct: 61  GDAGAQA-----------------------------IAEALRANTTLKELLLHLNQIGDA 91

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N T+T + L  N I   GA AIA  LK N+ ++ + L +N IG  GA A
Sbjct: 92  GAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQIGDGGAWA 151

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           ++E L+ +  +  L L   QIG  GA  +A+ L+ N T+  + L  N + D
Sbjct: 152 IAEALRVNSTVTVLSLRHNQIGDGGAWAIAEALKVNKTLIRISLDGNQIGD 202


>gi|156392783|ref|XP_001636227.1| predicted protein [Nematostella vectensis]
 gi|156223328|gb|EDO44164.1| predicted protein [Nematostella vectensis]
          Length = 375

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 33/356 (9%)

Query: 141 GFTGK-LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
           G  G+ +  E+ + L E  +     + + +   N GD G   +A  L  N T +++    
Sbjct: 23  GIIGRNMTPEAGRALGEMLRHNTTITCLSLFHGNIGDSGALSIASGLSKNTTLDKIEIEN 82

Query: 200 NGITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
           + I A G+ A    +Q +N  L T+++S N +GD     L  +LVDN  +  + +    L
Sbjct: 83  SCIGATGVSALAEFIQNNNSTLSTIDISVNSLGDACASELAKVLVDNTSLNVVYIGGKYL 142

Query: 259 RDEGAKAIAELLKNNSILRVLELNN-NMIDYSGFTSLAEALLENSTIRSLHL-NGNYGGA 316
            D G  +IAE LK N+ +R L +   NM   +G  +L E L  N+TI  L L NGN G +
Sbjct: 143 GDAGVASIAEALKVNTTVRKLGIKGRNMTPEAGR-ALGEMLKHNTTITCLSLVNGNIGDS 201

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM------------------SGLSSRK 358
            GA ++A GL  N +L ++ +  + IG  G+ AL                   +G++S  
Sbjct: 202 -GALSIASGLSQNTTLEKIQIVNSCIGATGVSALAKVIQNATHLDLSRNIIGDAGVASIA 260

Query: 359 GKLAV------LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
             L V      L I  ++++ +    + E +K+  ++  ++L   +IGD GA  IA  L 
Sbjct: 261 EALMVNTTVRALGIRGDNMTPEAGQALGEMLKHNTTITCLSLVNGNIGDSGALSIASGLS 320

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           QN T+  I +  + I + G SA+ +V+++    T LDL+ N IG  GAKA+S+V++
Sbjct: 321 QNTTLDKIQIDNSCIGATGVSALTKVIQN---ATHLDLSKNIIGTKGAKAISKVIE 373



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 196/386 (50%), Gaps = 21/386 (5%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG+ +    L+ N  ++TL + G  +  E  + L ++L  N  +  L L   ++ D GA 
Sbjct: 4   AGVASIAEALKVNTTVRTLGIIGRNMTPEAGRALGEMLRHNTTITCLSLFHGNIGDSGAL 63

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALA 323
           +IA  L  N+ L  +E+ N+ I  +G ++LAE +   NST+ ++ ++ N  G   A+ LA
Sbjct: 64  SIASGLSKNTTLDKIEIENSCIGATGVSALAEFIQNNNSTLSTIDISVNSLGDACASELA 123

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGL----SSRKGKLAVLDIGNNSISAKGAFHV 379
           K L  N SL  +++ G  +GD G+ ++   L    + RK     L I   +++ +    +
Sbjct: 124 KVLVDNTSLNVVYIGGKYLGDAGVASIAEALKVNTTVRK-----LGIKGRNMTPEAGRAL 178

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E +K+  ++  ++L   +IGD GA  IA  L QN T+  I +  + I + G SA+A+V+
Sbjct: 179 GEMLKHNTTITCLSLVNGNIGDSGALSIASGLSQNTTLEKIQIVNSCIGATGVSALAKVI 238

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           ++    T LDL+ N IG  G  +++E L  +  +  L +    +     + + +ML++N 
Sbjct: 239 QN---ATHLDLSRNIIGDAGVASIAEALMVNTTVRALGIRGDNMTPEAGQALGEMLKHNT 295

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVN 559
           TI+ L L    + D   SG   ++   S   +L  +   + CI    GA  ++   KV+ 
Sbjct: 296 TITCLSLVNGNIGD---SGALSIASGLSQNTTLDKIQIDNSCI----GATGVSALTKVIQ 348

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALK 585
            A T +DL+ N I   GA AI++ ++
Sbjct: 349 NA-THLDLSKNIIGTKGAKAISKVIE 373



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 258 LRDEGAKAIAELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSLHL-NGNYGG 315
           L D G  +IAE LK N+ +R L +   NM   +G  +L E L  N+TI  L L +GN G 
Sbjct: 1   LGDAGVASIAEALKVNTTVRTLGIIGRNMTPEAGR-ALGEMLRHNTTITCLSLFHGNIGD 59

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           + GA ++A GL  N +L ++ +  + IG  G+ AL   + +    L+ +DI  NS+    
Sbjct: 60  S-GALSIASGLSKNTTLDKIEIENSCIGATGVSALAEFIQNNNSTLSTIDISVNSLGDAC 118

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +A+ + +  SL  + +    +GD G   IA+ALK N T+  + + G N+  +   A+
Sbjct: 119 ASELAKVLVDNTSLNVVYIGGKYLGDAGVASIAEALKVNTTVRKLGIKGRNMTPEAGRAL 178

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
             +LK N+ IT L L    IG  GA +++  L  +  +  +++    IGA+G   +A ++
Sbjct: 179 GEMLKHNTTITCLSLVNGNIGDSGALSIASGLSQNTTLEKIQIVNSCIGATGVSALAKVI 238

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------Q 546
           +     + LDL  N + D             + + S+   L  +  +  L         +
Sbjct: 239 Q---NATHLDLSRNIIGD-------------AGVASIAEALMVNTTVRALGIRGDNMTPE 282

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
             + L +  K  N  +T + L    I D GA +IA  L  N    +  + + N+ +   G
Sbjct: 283 AGQALGEMLK-HNTTITCLSLVNGNIGDSGALSIASGLSQN--TTLDKIQIDNSCIGATG 339

Query: 607 QSALT 611
            SALT
Sbjct: 340 VSALT 344


>gi|260804601|ref|XP_002597176.1| hypothetical protein BRAFLDRAFT_66304 [Branchiostoma floridae]
 gi|229282439|gb|EEN53188.1| hypothetical protein BRAFLDRAFT_66304 [Branchiostoma floridae]
          Length = 596

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           I  + LN+    +G  G KC+   L  N  +ERL L    +  EGA+ +A++LK N  + 
Sbjct: 61  ITERELNMDHYGLGPTGTKCIATALTINTFIERLSLEDNWMTGEGAEYMADMLKENPSIT 120

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            + L NN +   G  ++ + L+EN ++R ++L  N      A   A  ++ N+ + EL+L
Sbjct: 121 DINLANNRLGTEGAEAMGDMLVENGSLRRVNLAENKFSDRDAMFFAGAMQNNRHMEELNL 180

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            GN   + G   + +G+ + +  +  L++  N +  KG F +   I++  +L W+++  N
Sbjct: 181 SGNEFSEVGGGFMGAGIGANE-TITALNLSWNHLRQKGVFALCRGIRSNNTLQWLDVSWN 239

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
              DEGA  +A  LK N  +T IDL  N I SKGA  +A+ L  N  + +L L  NPI  
Sbjct: 240 GFDDEGASGLATVLKYNEVLTYIDLTNNRITSKGAMKMAKALFINKTLQTLRLGKNPIDM 299

Query: 458 DGAKALSEVLK 468
           DG+  L + ++
Sbjct: 300 DGSLQLLKAIR 310



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 1/248 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++M     G  G   +A +L  N   E +S   N +T  G +    +L+ N ++  +NL+
Sbjct: 66  LNMDHYGLGPTGTKCIATALTINTFIERLSLEDNWMTGEGAEYMADMLKENPSITDINLA 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G EG + + D+LV+N  + R+ L+     D  A   A  ++NN  +  L L+ N  
Sbjct: 126 NNRLGTEGAEAMGDMLVENGSLRRVNLAENKFSDRDAMFFAGAMQNNRHMEELNLSGNEF 185

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   +   +  N TI +L+L+ N+    G  AL +G+  N +L+ L +  N   DEG
Sbjct: 186 SEVGGGFMGAGIGANETITALNLSWNHLRQKGVFALCRGIRSNNTLQWLDVSWNGFDDEG 245

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
              L + L   +  L  +D+ NN I++KGA  +A+ +   K+L  + L  N I  +G+ +
Sbjct: 246 ASGLATVLKYNE-VLTYIDLTNNRITSKGAMKMAKALFINKTLQTLRLGKNPIDMDGSLQ 304

Query: 407 IADALKQN 414
           +  A++ N
Sbjct: 305 LLKAIRGN 312



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 133/274 (48%), Gaps = 10/274 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           REL++    +G  G + + + L+     +  L + +N ++ +GA ++A+ +K   S+  I
Sbjct: 64  RELNMDHYGLGPTGTKCIATALTINTF-IERLSLEDNWMTGEGAEYMADMLKENPSITDI 122

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           NL  N +G EGAE + D L +N ++  ++L  N    + A   A  +++N  +  L+L+ 
Sbjct: 123 NLANNRLGTEGAEAMGDMLVENGSLRRVNLAENKFSDRDAMFFAGAMQNNRHMEELNLSG 182

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N     G   +   +  +  I  L L W  +   G   +   +R NNT+  LD+  NG  
Sbjct: 183 NEFSEVGGGFMGAGIGANETITALNLSWNHLRQKGVFALCRGIRSNNTLQWLDVSWNGFD 242

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
           DE  SG   +  ++  +       +  L  N +  +GA  +A++   +N+ L ++ L  N
Sbjct: 243 DEGASGLATVLKYNEVL------TYIDLTNNRITSKGAMKMAKAL-FINKTLQTLRLGKN 295

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            I  DG+  + +A++ NE   +  L+L +  L++
Sbjct: 296 PIDMDGSLQLLKAIRGNEQSGMHVLDLTDVLLSQ 329



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 13/216 (6%)

Query: 129 NWSVGAGTNLLSGF-------------TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFG 175
           NW  G G   ++                 +L  E  + + +   E  +   V+++   F 
Sbjct: 99  NWMTGEGAEYMADMLKENPSITDINLANNRLGTEGAEAMGDMLVENGSLRRVNLAENKFS 158

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D    F A ++  N+  EE++ + N  +  G       + +N  +  LNLS N +  +GV
Sbjct: 159 DRDAMFFAGAMQNNRHMEELNLSGNEFSEVGGGFMGAGIGANETITALNLSWNHLRQKGV 218

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
             LC  +  N  ++ L +S     DEGA  +A +LK N +L  ++L NN I   G   +A
Sbjct: 219 FALCRGIRSNNTLQWLDVSWNGFDDEGASGLATVLKYNEVLTYIDLTNNRITSKGAMKMA 278

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +AL  N T+++L L  N     G+  L K + GN+ 
Sbjct: 279 KALFINKTLQTLRLGKNPIDMDGSLQLLKAIRGNEQ 314


>gi|281207706|gb|EFA81886.1| deliriumA [Polysphondylium pallidum PN500]
          Length = 617

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 152/287 (52%), Gaps = 2/287 (0%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L  N  + TL LS N IG++   C+   LV+N  +  L LS   + +EGA+ I++ L  
Sbjct: 268 ILIDNKLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFNSIGNEGAEEISKALGT 327

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L  L+L+ N I   G  +L+ A+    T+  L+L+ N  G  G + +A  +  N  L
Sbjct: 328 NKTLTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFGTKGIDVIADSIGKNTCL 387

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             +    N I ++  + ++  +      L  L+  + S+ +    +++E I+  ++L  I
Sbjct: 388 LNIDFSRNEISEKNAK-IIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQASQTLNSI 446

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N+ G +G++ +A AL+ + ++  +DL GN+I  KGA  IA  L DN  +T+L LA+
Sbjct: 447 DLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKGAIPIAEALADNKSLTNLSLAF 506

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADMLRYN 498
           N IG   A+ L   +K + ++ +L +    +IG  GA  +++ L YN
Sbjct: 507 NNIGTQAAQQLGAAIKVNNSLVSLDISINAEIGPIGATSISEGLCYN 553



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 170/341 (49%), Gaps = 14/341 (4%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L   + D + F  +   L++N  I +L L+ N  G   A  +   L  N ++  L+L  N
Sbjct: 254 LTPTLFDVTSFVKMI--LIDNKLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFN 311

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           SIG+EG   +   L + K  L  LD+  N I  KG+  ++  I+  K+L  +NL  N  G
Sbjct: 312 SIGNEGAEEISKALGTNK-TLTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFG 370

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            +G + IAD++ +N  +  ID   N I  K A  I  V+K++  + SL+     + +D  
Sbjct: 371 TKGIDVIADSIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFCDTSLKSDSM 430

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
           K +SE ++    +N++ L   + G  G++ +A  L+++N+++ LDL  N + D+      
Sbjct: 431 KYISEGIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDK------ 484

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN-EIRDDGA 577
           G      A+   K +   SL  N +  Q A+ L  + K VN +L S+D++ N EI   GA
Sbjct: 485 GAIPIAEALADNKSLTNLSLAFNNIGTQAAQQLGAAIK-VNNSLVSLDISINAEIGPIGA 543

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 618
            +I++ L  N+ +    + L +N + + G   + D  + V+
Sbjct: 544 TSISEGLCYNKRLT-QQIILTHNNINQQGVQTMKDTLEQVF 583



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 148/294 (50%), Gaps = 3/294 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +++S  + G+EG   ++++LG N+T   +  + N I   G KA    +Q+   L  
Sbjct: 302 TITHLNLSFNSIGNEGAEEISKALGTNKTLTHLDLSQNCIGLKGSKALSTAIQTTKTLHI 361

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNLS N  G +G+  + D +  N  +  +  S  ++ ++ AK I +++KN+  L+ L   
Sbjct: 362 LNLSKNRFGTKGIDVIADSIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFC 421

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +  +       ++E +  + T+ S+ L+ N  G  G+ +LA  L+ + SL  L L GN I
Sbjct: 422 DTSLKSDSMKYISEGIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDI 481

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN-DIGD 401
           GD+G   +   L+  K  L  L +  N+I  + A  +   IK   SL+ +++ +N +IG 
Sbjct: 482 GDKGAIPIAEALADNKS-LTNLSLAFNNIGTQAAQQLGAAIKVNNSLVSLDISINAEIGP 540

Query: 402 EGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            GA  I++ L  N+ +T  I L  NNI+ +G   +   L+   V+T     Y P
Sbjct: 541 IGATSISEGLCYNKRLTQQIILTHNNINQQGVQTMKDTLEQVFVVTFDSYIYPP 594



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 159/318 (50%), Gaps = 3/318 (0%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           F+   L  N+    +  + NGI           L +N  +  LNLS N IG+EG + +  
Sbjct: 264 FVKMILIDNKLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFNSIGNEGAEEISK 323

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L  N  +  L LS   +  +G+KA++  ++    L +L L+ N     G   +A+++ +
Sbjct: 324 ALGTNKTLTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFGTKGIDVIADSIGK 383

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+ + ++  + N      A  +   ++ + +L+ L+    S+  + ++ +  G+ + +  
Sbjct: 384 NTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQASQ-T 442

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  +D+  N    KG+  +A  +++  SL +++L  NDIGD+GA  IA+AL  N+++T +
Sbjct: 443 LNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKGAIPIAEALADNKSLTNL 502

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYN-PIGADGAKALSEVLKFHGNI-NTLKL 478
            L  NNI ++ A  +   +K N+ + SLD++ N  IG  GA ++SE L ++  +   + L
Sbjct: 503 SLAFNNIGTQAAQQLGAAIKVNNSLVSLDISINAEIGPIGATSISEGLCYNKRLTQQIIL 562

Query: 479 GWCQIGASGAEFVADMLR 496
               I   G + + D L 
Sbjct: 563 THNNINQQGVQTMKDTLE 580



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 13/222 (5%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    +++S   FG +G+  +A+S+G N     + F+ N I+    K    V++++  L+
Sbjct: 357 KTLHILNLSKNRFGTKGIDVIADSIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQ 416

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQ-LSSVDL-RDE----GAKAIAELLKNNSI 275
           +LN     +  + +K + +      G++  Q L+S+DL R+E    G+K++A  L++++ 
Sbjct: 417 SLNFCDTSLKSDSMKYISE------GIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNS 470

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L+L  N I   G   +AEAL +N ++ +L L  N  G   A  L   ++ N SL  L
Sbjct: 471 LAFLDLCGNDIGDKGAIPIAEALADNKSLTNLSLAFNNIGTQAAQQLGAAIKVNNSLVSL 530

Query: 336 HLHGNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            +  N+ IG  G  ++  GL   K     + + +N+I+ +G 
Sbjct: 531 DISINAEIGPIGATSISEGLCYNKRLTQQIILTHNNINQQGV 572



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 30/227 (13%)

Query: 131 SVGAGTNLLS-GFT-GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY 188
           S+G  T LL+  F+  ++  ++ + + +  K      S++    +   + + +++E +  
Sbjct: 380 SIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQA 439

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           +QT   +  + N     G K+    LQ + +L  L+L GN IGD+G   + + L DN  +
Sbjct: 440 SQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKGAIPIAEALADNKSL 499

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L L+  ++  + A+ +   +K N+ L  L+++ N          AE            
Sbjct: 500 TNLSLAFNNIGTQAAQQLGAAIKVNNSLVSLDISIN----------AEI----------- 538

Query: 309 LNGNYGGALGANALAKGLEGNKSL-RELHLHGNSIGDEGIRALMSGL 354
                 G +GA ++++GL  NK L +++ L  N+I  +G++ +   L
Sbjct: 539 ------GPIGATSISEGLCYNKRLTQQIILTHNNINQQGVQTMKDTL 579


>gi|156354309|ref|XP_001623340.1| predicted protein [Nematostella vectensis]
 gi|156210028|gb|EDO31240.1| predicted protein [Nematostella vectensis]
          Length = 389

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 5/342 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           FGD     LAE L  N +  +V   +  +   GIK     L+ N  ++TL + G  +  E
Sbjct: 6   FGDSCAIKLAEILSDNTSLTDVRIKSEILGGTGIKRLANALKVNKTVRTLGIDGGNMTSE 65

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
             + + ++L  N  V  L LS   L D GA+ IA  L  N+ +  L + N+ I  +G  +
Sbjct: 66  AGRAIGEMLRHNTTVTSLFLSGGRLGDFGARGIAIGLAQNTTIAQLSIANSSICTAGIKA 125

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           + ++L  N T+  + +  +  G   A  LA+ L  N SL ++ +  N +G  GI+ L + 
Sbjct: 126 ITKSLKNNVTLSEICIESDGFGDSCAIKLAEILSDNTSLTDVRIDSNILGGTGIKRLANA 185

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L   K  +  L I   +++++    + E +++  ++  + L    +GD GA  IA  L Q
Sbjct: 186 LKVNK-TVRTLGIAGGNMTSEAGRAIGEMLRHNTTVTSLFLSGGRLGDSGARGIAIGLAQ 244

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGN 472
            RTI  + +  ++I + G  AI +V+++   +T LDL+ NP+G DG KA++ +L K    
Sbjct: 245 KRTIAQLSIANSSIGTAGIKAITKVIQN---VTHLDLSGNPVGYDGVKAIARLLVKSCCR 301

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +  L L  C I   GA+ +A  L  N+ +  L +  N + DE
Sbjct: 302 LKFLFLDRCNIDVFGAKELAIALSRNSCLEELSVACNDINDE 343



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 183/369 (49%), Gaps = 16/369 (4%)

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N  GD     L +IL DN  +  +++ S  L   G K +A  LK N  +R L ++   + 
Sbjct: 4   NGFGDSCAIKLAEILSDNTSLTDVRIKSEILGGTGIKRLANALKVNKTVRTLGIDGGNMT 63

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
                ++ E L  N+T+ SL L+G   G  GA  +A GL  N ++ +L +  +SI   GI
Sbjct: 64  SEAGRAIGEMLRHNTTVTSLFLSGGRLGDFGARGIAIGLAQNTTIAQLSIANSSICTAGI 123

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           +A+   L +    L+ + I ++      A  +AE + +  SL  + +  N +G  G +++
Sbjct: 124 KAITKSLKNNV-TLSEICIESDGFGDSCAIKLAEILSDNTSLTDVRIDSNILGGTGIKRL 182

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           A+ALK N+T+ T+ + G N+ S+   AI  +L+ N+ +TSL L+   +G  GA+ ++  L
Sbjct: 183 ANALKVNKTVRTLGIAGGNMTSEAGRAIGEMLRHNTTVTSLFLSGGRLGDSGARGIAIGL 242

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS---- 523
                I  L +    IG +G + +  +++    ++ LDL  N +      G +G+     
Sbjct: 243 AQKRTIAQLSIANSSIGTAGIKAITKVIQ---NVTHLDLSGNPV------GYDGVKAIAR 293

Query: 524 FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
               +   LK  LF   C   + GAK LA +    N  L  + +A N+I D+G  A+A++
Sbjct: 294 LLVKSCCRLK-FLFLDRCNIDVFGAKELAIALSR-NSCLEELSVACNDINDEGMCALAES 351

Query: 584 LKANEDVAV 592
           + +NE + V
Sbjct: 352 VASNETLQV 360



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 7/322 (2%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           G +  E+ + + E  +     +S+ +SG   GD G   +A  L  N T  ++S A + I 
Sbjct: 60  GNMTSEAGRAIGEMLRHNTTVTSLFLSGGRLGDFGARGIAIGLAQNTTIAQLSIANSSIC 119

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
            AGIKA    L++N+ L  + +  +  GD     L +IL DN  +  +++ S  L   G 
Sbjct: 120 TAGIKAITKSLKNNVTLSEICIESDGFGDSCAIKLAEILSDNTSLTDVRIDSNILGGTGI 179

Query: 264 KAIAELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           K +A  LK N  +R L +   NM   +G  ++ E L  N+T+ SL L+G   G  GA  +
Sbjct: 180 KRLANALKVNKTVRTLGIAGGNMTSEAG-RAIGEMLRHNTTVTSLFLSGGRLGDSGARGI 238

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE- 381
           A GL   +++ +L +  +SIG  GI+A+   + +    +  LD+  N +   G   +A  
Sbjct: 239 AIGLAQKRTIAQLSIANSSIGTAGIKAITKVIQN----VTHLDLSGNPVGYDGVKAIARL 294

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K+C  L ++ L   +I   GA+++A AL +N  +  + +  N+I+ +G  A+A  +  
Sbjct: 295 LVKSCCRLKFLFLDRCNIDVFGAKELAIALSRNSCLEELSVACNDINDEGMCALAESVAS 354

Query: 442 NSVITSLDLAYNPIGADGAKAL 463
           N  +  L ++YN +G +G K +
Sbjct: 355 NETLQVLYISYNNVGQNGKKVI 376


>gi|74203197|dbj|BAE26275.1| unnamed protein product [Mus musculus]
          Length = 456

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 183/388 (47%), Gaps = 17/388 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 52  ALTELSLRTNELGDGGVGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 111 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 171 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++ L+    + ++ +   ++ +        VL  N  +  L ++ NP+G 
Sbjct: 291 LKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKNRSLLELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N      C
Sbjct: 351 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNN------C 404

Query: 517 SGCNG----LSFFHSAIYSLKHMLFYSL 540
            G  G    L        +L+ ++ Y +
Sbjct: 405 MGGPGVLQLLESLKQPSCTLQQLVLYDI 432



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 105 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 165 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  +R+L L      A G   L + L   +SL+EL
Sbjct: 225 QELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 285 SLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKNRSLLELQMS 344

Query: 396 MNDIGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 345 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 404

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 405 MGGPGVLQLLESLK 418



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 183/425 (43%), Gaps = 13/425 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 2   SLDIQCEQLSD---ARWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 58

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 59  RTNELGDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 118

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 119 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 179 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 238

Query: 404 AEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +    L  +  + T+ L   +I ++G   + RVL+    +  L LA N +  +GA+ 
Sbjct: 239 IAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARL 298

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCN 520
           L E L   G  + +L +  C + A+   +   +L  N ++  L + +N L DE V   C 
Sbjct: 299 LCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKNRSLLELQMSSNPLGDEGVQELCK 358

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
            LS   + +      L+   C     G   LA    + N +L  +DL+ N +   G   +
Sbjct: 359 ALSQPDTVLRE----LWLGDCDVTNSGCSSLANVL-LANRSLRELDLSNNCMGGPGVLQL 413

Query: 581 AQALK 585
            ++LK
Sbjct: 414 LESLK 418


>gi|285402659|ref|NP_001165572.1| ribonuclease inhibitor isoform b [Mus musculus]
          Length = 492

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 183/388 (47%), Gaps = 17/388 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 88  ALTELSLRTNELGDGGVGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 146

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 147 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 206

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 207 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 266

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 267 SNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNE 326

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++ L+    + ++ +   ++ +        VL  +  +  L ++ NP+G 
Sbjct: 327 LKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGD 386

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N      C
Sbjct: 387 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNN------C 440

Query: 517 SGCNG----LSFFHSAIYSLKHMLFYSL 540
            G  G    L        +L+ ++ Y +
Sbjct: 441 MGGPGVLQLLESLKQPSCTLQQLVLYDI 468



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 141 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 200

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 201 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 260

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  +R+L L      A G   L + L   +SL+EL
Sbjct: 261 QELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKEL 320

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 321 SLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMS 380

Query: 396 MNDIGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 381 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 440

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 441 MGGPGVLQLLESLK 454



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 183/425 (43%), Gaps = 13/425 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 38  SLDIQCEQLSDA---RWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 94

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 95  RTNELGDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 154

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 155 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 214

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 215 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 274

Query: 404 AEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +    L  +  + T+ L   +I ++G   + RVL+    +  L LA N +  +GA+ 
Sbjct: 275 IAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARL 334

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCN 520
           L E L   G  + +L +  C + A+   +   +L  + ++  L + +N L DE V   C 
Sbjct: 335 LCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCK 394

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
            LS   + +      L+   C     G   LA    + N +L  +DL+ N +   G   +
Sbjct: 395 ALSQPDTVLRE----LWLGDCDVTNSGCSSLANVL-LANRSLRELDLSNNCMGGPGVLQL 449

Query: 581 AQALK 585
            ++LK
Sbjct: 450 LESLK 454


>gi|410931379|ref|XP_003979073.1| PREDICTED: leucine-rich repeat-containing protein 34-like, partial
           [Takifugu rubripes]
          Length = 742

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 10/304 (3%)

Query: 222 TLNLSGNP-----IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           TL+LSG+      + D+    +   L +N  V  L +S  ++ DEG K  A+LL+++S L
Sbjct: 395 TLDLSGSRKCVQRLDDKDALVVSKCLRNNRRVTGLDVSYNNITDEGLKHFADLLQDDSTL 454

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L  N     G  +LA+ L  NST+ SL L+GN  G  G   LA  L+ N SL EL 
Sbjct: 455 NSLDLRFNDCQTDGAKALAKILQGNSTLFSLTLSGNKIGDSGGIQLAMMLQANDSLMELE 514

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA---FHVAEYIKNCKSLLWIN 393
           L    +G E I    + L S +  L  +D   + +++       HV++ +    SLL ++
Sbjct: 515 LAACDLGIESIITFANVLKSNRS-LRRVDFSQSLLTSHQEEWLLHVSDMLAMNSSLLELH 573

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L M  + D G E++A+ L  NR +  +DL  N +   GAS +A VLK N+ +  +DL++N
Sbjct: 574 LGMAGMTDTGMERLAEGLAANRALRYLDLRCNRLSCDGASHLAGVLKQNATLDVIDLSFN 633

Query: 454 PIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            I   GA  +SE L   G  +  L +    IG  G   +A  ++ N T++ +++  N L 
Sbjct: 634 RIQNGGAVHMSEALASPGCGLRALSVSSNSIGTDGLLSLAQAVKANRTLTDINIWGNDLE 693

Query: 513 DEVC 516
           + VC
Sbjct: 694 EPVC 697



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 8/310 (2%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +D+S  N  DEGL   A+ L  + T   +    N     G KA   +LQ N  L 
Sbjct: 424 RRVTGLDVSYNNITDEGLKHFADLLQDDSTLNSLDLRFNDCQTDGAKALAKILQGNSTLF 483

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L LSGN IGD G   L  +L  N  +  L+L++ DL  E     A +LK+N  LR ++ 
Sbjct: 484 SLTLSGNKIGDSGGIQLAMMLQANDSLMELELAACDLGIESIITFANVLKSNRSLRRVDF 543

Query: 282 NNNMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + +++          +++ L  NS++  LHL        G   LA+GL  N++LR L L 
Sbjct: 544 SQSLLTSHQEEWLLHVSDMLAMNSSLLELHLGMAGMTDTGMERLAEGLAANRALRYLDLR 603

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN--CKSLLWINLYM 396
            N +  +G   L +G+  +   L V+D+  N I   GA H++E + +  C  L  +++  
Sbjct: 604 CNRLSCDGASHL-AGVLKQNATLDVIDLSFNRIQNGGAVHMSEALASPGC-GLRALSVSS 661

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG +G   +A A+K NRT+T I++ GN++  +    + R L  +  +        P  
Sbjct: 662 NSIGTDGLLSLAQAVKANRTLTDINIWGNDL-EEPVCQVFRQLIRSGRLPPDKTDVTPFE 720

Query: 457 ADGAKALSEV 466
            DG   L+E+
Sbjct: 721 TDGRVFLAEL 730



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 41/273 (15%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           K A  V++ ++N + +  +++  N+I DEG +  AD L+ + T+ ++DL  N+  + GA 
Sbjct: 411 KDALVVSKCLRNNRRVTGLDVSYNNITDEGLKHFADLLQDDSTLNSLDLRFNDCQTDGAK 470

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG--------- 484
           A+A++L+ NS + SL L+ N IG  G   L+ +L+ + ++  L+L  C +G         
Sbjct: 471 ALAKILQGNSTLFSLTLSGNKIGDSGGIQLAMMLQANDSLMELELAACDLGIESIITFAN 530

Query: 485 ------------------ASGAE----FVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
                              S  E     V+DML  N+++  L L   G+ D       G+
Sbjct: 531 VLKSNRSLRRVDFSQSLLTSHQEEWLLHVSDMLAMNSSLLELHLGMAGMTD------TGM 584

Query: 523 SFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
                 + + + + +  L  N L   GA  LA   K  N  L  IDL+FN I++ GA  +
Sbjct: 585 ERLAEGLAANRALRYLDLRCNRLSCDGASHLAGVLK-QNATLDVIDLSFNRIQNGGAVHM 643

Query: 581 AQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           ++AL A+    + +L++++N +   G  +L  A
Sbjct: 644 SEAL-ASPGCGLRALSVSSNSIGTDGLLSLAQA 675



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 14/286 (4%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++K L  N+ +  L +  N+I DEG++   + L      L  LD+  N     GA  +A+
Sbjct: 416 VSKCLRNNRRVTGLDVSYNNITDEGLKHF-ADLLQDDSTLNSLDLRFNDCQTDGAKALAK 474

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++   +L  + L  N IGD G  ++A  L+ N ++  ++L   ++  +     A VLK 
Sbjct: 475 ILQGNSTLFSLTLSGNKIGDSGGIQLAMMLQANDSLMELELAACDLGIESIITFANVLKS 534

Query: 442 NSVITSLDLAYNPIGADGAKAL---SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           N  +  +D + + + +   + L   S++L  + ++  L LG   +  +G E +A+ L  N
Sbjct: 535 NRSLRRVDFSQSLLTSHQEEWLLHVSDMLAMNSSLLELHLGMAGMTDTGMERLAEGLAAN 594

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFK 556
             +  LDLR N L       C+G S     +     +    L  N +Q  GA  ++++  
Sbjct: 595 RALRYLDLRCNRL------SCDGASHLAGVLKQNATLDVIDLSFNRIQNGGAVHMSEALA 648

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
                L ++ ++ N I  DG  ++AQA+KAN    +T +N+  N L
Sbjct: 649 SPGCGLRALSVSSNSIGTDGLLSLAQAVKANR--TLTDINIWGNDL 692


>gi|77416905|sp|P29315.2|RINI_RAT RecName: Full=Ribonuclease inhibitor; AltName:
           Full=Ribonuclease/angiogenin inhibitor 1
          Length = 456

 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 174/357 (48%), Gaps = 7/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S     +T AG      VL+S   L
Sbjct: 52  ALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GDEG+K LC+ L D    +E+LQL   +L     + +A +L+     + L
Sbjct: 111 RELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN    +G  +L + L +++  + SL L      +     L   +    SL+EL L 
Sbjct: 171 VLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     +L  L + +  ++A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +        VL  N  +  L ++ NP+G 
Sbjct: 291 LKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            G   L + L +   +   L LG C +  SG   +A +L  N ++  LDL  N + D
Sbjct: 351 SGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGD 407



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 4/320 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + L     + ++    GDEGL  L E L   Q   E++      +TA   +   
Sbjct: 99  VLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL+     K L LS N   + G+  LC  L D+A  +E L+L +  +     K + +++
Sbjct: 159 SVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            + + L+ L+L +N +  +G  +L   LL  S  +R+L L      A G   L + L   
Sbjct: 219 ASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+EL L GN + DEG + L   L     +L  L +   S++A    H    +   +SL
Sbjct: 279 QSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSL 338

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             + +  N +GD G  ++  AL    T+   + LG  ++   G S++A VL  N  +  L
Sbjct: 339 FELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLREL 398

Query: 449 DLAYNPIGADGAKALSEVLK 468
           DL+ N +G +G   L E LK
Sbjct: 399 DLSNNCMGDNGVLQLLESLK 418



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 178/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            E L   Q  + V     G+T    K     +Q+N AL  L+L  N +GD GV  +   L
Sbjct: 16  TELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
            +    +++L L +  L + G   + ++L++ S LR L LN+N +   G   L E L + 
Sbjct: 76  QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL L  N   + GI  L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITT 419
           L  L + N  I++     + + + +  SL  ++L  N +G+ G   +    L  +  + T
Sbjct: 196 LESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + L   ++ ++G   + RVL+    +  L LA N +  +GA+ L E L   G  + +L +
Sbjct: 256 LWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C + A+       +L  N ++  L + +N L D  V   C  L +  + +     +L+
Sbjct: 316 KTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVL----RVLW 371

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
              C     G   LA +  + N +L  +DL+ N + D+G   + ++LK
Sbjct: 372 LGDCDVTDSGCSSLA-TVLLANRSLRELDLSNNCMGDNGVLQLLESLK 418



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 3/257 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +F + G+  L + L  +    E +     GIT+A  K    V+ S  +L+ 
Sbjct: 167 FKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQE 226

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+L  N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+    L+ L L
Sbjct: 227 LDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSL 286

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N +   G   L E+LLE    + SL +      A         L  N+SL EL +  N
Sbjct: 287 AGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSN 346

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD G+  L   L      L VL +G+  ++  G   +A  +   +SL  ++L  N +G
Sbjct: 347 PLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMG 406

Query: 401 DEGAEKIADALKQNRTI 417
           D G  ++ ++LKQ   I
Sbjct: 407 DNGVLQLLESLKQPSCI 423



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 152/368 (41%), Gaps = 18/368 (4%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST--IRSLH 308
           ++L    L +   K I   ++ N  L  L L  N +  +G   + + L +N T  I+ L 
Sbjct: 28  VRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLS 86

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L        G   L   L    +LRELHL+ N +GDEG++ L  GL   + +L  L +  
Sbjct: 87  LQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEY 146

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNI 427
            +++A     +A  ++       + L  ND  + G   +   LK +   + ++ L    I
Sbjct: 147 CNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGI 206

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL-SEVLKFHGNINTLKLGWCQIGAS 486
            S     +  V+   + +  LDL  N +G  G  AL S +L     + TL L  C + A 
Sbjct: 207 TSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAE 266

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY---SLKHMLFYSLCIN 543
           G + +  +LR   ++  L L  N L+DE      G      ++         L+   C  
Sbjct: 267 GCKDLCRVLRAKQSLKELSLAGNELKDE------GAQLLCESLLEPGCQLESLWVKTC-- 318

Query: 544 YLQGAKCLA-QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            L  A C    S    N +L  + ++ N + D G   + +AL    D  +  L L +  +
Sbjct: 319 SLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKAL-GYPDTVLRVLWLGDCDV 377

Query: 603 TKFGQSAL 610
           T  G S+L
Sbjct: 378 TDSGCSSL 385



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 5/154 (3%)

Query: 156 EFAKELRAFSSV---DMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
           +  + LRA  S+    ++G    DEG   L ESL       E +      +TAA    F 
Sbjct: 270 DLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFC 329

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELL 270
            VL  N +L  L +S NP+GD GV  LC  L     V R L L   D+ D G  ++A +L
Sbjct: 330 SVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVL 389

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
             N  LR L+L+NN +  +G   L E+L + S I
Sbjct: 390 LANRSLRELDLSNNCMGDNGVLQLLESLKQPSCI 423


>gi|323363004|ref|NP_620805.2| ribonuclease inhibitor isoform b [Rattus norvegicus]
 gi|398303850|ref|NP_001257692.1| ribonuclease inhibitor isoform b [Rattus norvegicus]
 gi|47682903|gb|AAH70501.1| Ribonuclease/angiogenin inhibitor 1 [Rattus norvegicus]
 gi|149061559|gb|EDM11982.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Rattus
           norvegicus]
 gi|149061560|gb|EDM11983.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Rattus
           norvegicus]
 gi|308387037|dbj|BAJ22804.1| ribonuclease inhibitor [Rattus norvegicus]
          Length = 456

 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 174/357 (48%), Gaps = 7/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S     +T AG      VL+S   L
Sbjct: 52  ALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GDEG+K LC+ L D    +E+LQL   +L     + +A +L+     + L
Sbjct: 111 RELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN    +G  +L + L +++  + SL L      +     L   +    SL+EL L 
Sbjct: 171 VLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     +L  L + +  ++A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +        VL  N  +  L ++ NP+G 
Sbjct: 291 LKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            G   L + L +   +   L LG C +  SG   +A +L  N ++  LDL  N + D
Sbjct: 351 SGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGD 407



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 147/320 (45%), Gaps = 4/320 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + L     + ++    GDEGL  L E L   Q   E++      +TA   +   
Sbjct: 99  VLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL+     K L LS N   + G+  LC  L D+A  +E L+L +  +     K + +++
Sbjct: 159 SVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            + + L+ L+L +N +  +G  +L   LL  S  +R+L L      A G   L + L   
Sbjct: 219 ASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+EL L GN + DEG + L   L     +L  L +   S++A    H    +   +SL
Sbjct: 279 QSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSL 338

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             + +  N +GD G  ++  AL    T+   + LG  ++   G S++A VL  N  +  L
Sbjct: 339 FELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLREL 398

Query: 449 DLAYNPIGADGAKALSEVLK 468
           DL+ N +G  G   L E LK
Sbjct: 399 DLSNNCMGDTGVLQLLESLK 418



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 177/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            E L   Q  + V     G+T    K     +Q+N AL  L+L  N +GD GV  +   L
Sbjct: 16  TELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
            +    +++L L +  L + G   + ++L++ S LR L LN+N +   G   L E L + 
Sbjct: 76  QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL L  N   + GI  L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITT 419
           L  L + N  I++     + + + +  SL  ++L  N +G+ G   +    L  +  + T
Sbjct: 196 LESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + L   ++ ++G   + RVL+    +  L LA N +  +GA+ L E L   G  + +L +
Sbjct: 256 LWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C + A+       +L  N ++  L + +N L D  V   C  L +  + +     +L+
Sbjct: 316 KTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVL----RVLW 371

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
              C     G   LA +  + N +L  +DL+ N + D G   + ++LK
Sbjct: 372 LGDCDVTDSGCSSLA-TVLLANRSLRELDLSNNCMGDTGVLQLLESLK 418



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 3/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +F + G+  L + L  +    E +     GIT+A  K    V+ S  +L+ 
Sbjct: 167 FKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQE 226

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+L  N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+    L+ L L
Sbjct: 227 LDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSL 286

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N +   G   L E+LLE    + SL +      A         L  N+SL EL +  N
Sbjct: 287 AGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSN 346

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD G+  L   L      L VL +G+  ++  G   +A  +   +SL  ++L  N +G
Sbjct: 347 PLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMG 406

Query: 401 DEGAEKIADALKQ 413
           D G  ++ ++LKQ
Sbjct: 407 DTGVLQLLESLKQ 419



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 152/368 (41%), Gaps = 18/368 (4%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST--IRSLH 308
           ++L    L +   K I   ++ N  L  L L  N +  +G   + + L +N T  I+ L 
Sbjct: 28  VRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLS 86

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L        G   L   L    +LRELHL+ N +GDEG++ L  GL   + +L  L +  
Sbjct: 87  LQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEY 146

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNI 427
            +++A     +A  ++       + L  ND  + G   +   LK +   + ++ L    I
Sbjct: 147 CNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGI 206

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL-SEVLKFHGNINTLKLGWCQIGAS 486
            S     +  V+   + +  LDL  N +G  G  AL S +L     + TL L  C + A 
Sbjct: 207 TSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAE 266

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY---SLKHMLFYSLCIN 543
           G + +  +LR   ++  L L  N L+DE      G      ++         L+   C  
Sbjct: 267 GCKDLCRVLRAKQSLKELSLAGNELKDE------GAQLLCESLLEPGCQLESLWVKTC-- 318

Query: 544 YLQGAKCLA-QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            L  A C    S    N +L  + ++ N + D G   + +AL    D  +  L L +  +
Sbjct: 319 SLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKAL-GYPDTVLRVLWLGDCDV 377

Query: 603 TKFGQSAL 610
           T  G S+L
Sbjct: 378 TDSGCSSL 385



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 5/153 (3%)

Query: 156 EFAKELRAFSSV---DMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
           +  + LRA  S+    ++G    DEG   L ESL       E +      +TAA    F 
Sbjct: 270 DLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFC 329

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELL 270
            VL  N +L  L +S NP+GD GV  LC  L     V R L L   D+ D G  ++A +L
Sbjct: 330 SVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVL 389

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
             N  LR L+L+NN +  +G   L E+L + S 
Sbjct: 390 LANRSLRELDLSNNCMGDTGVLQLLESLKQPSC 422


>gi|292626195|ref|XP_695332.4| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 [Danio
            rerio]
          Length = 1314

 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 201/422 (47%), Gaps = 23/422 (5%)

Query: 175  GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
             DE L  L+  +   QT +        +T     A   VL+S+  LK LN+S N + D G
Sbjct: 777  SDECLIRLSAVI---QTCKRALLNDCNLTEKSCSALTSVLRSDTNLKVLNMSNNNLQDSG 833

Query: 235  VKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKN--NSILRVLELNNNMIDYSGF 291
            ++ LC  + D    +E L+LS  DL +E   A+A +L +  NS L+ L+L+NN +  SG 
Sbjct: 834  LRLLCSGMKDIKCELEVLRLSKCDLTEESCSALASVLSSGFNS-LKDLDLSNNNLQNSGV 892

Query: 292  TSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRA 349
              L++ L + N T+  L L+       G  ALA  L  N S L EL L GN  G  G++ 
Sbjct: 893  KLLSDGLKDSNCTLEKLGLSDCNISEEGYKALASALRSNPSHLIELDLRGNDPGQSGVKE 952

Query: 350  LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIA 408
            L   L     KL  L + N ++  +    +A  +++   SL  ++L  N++ D G ++++
Sbjct: 953  LAELLQDPHCKLKTLRLRNCALREESCSALASVLRSESSSLKDLDLSNNNLQDSGVKRLS 1012

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVL 467
            D LK ++ +  + L   +I  +G  A+   L+ N S +  L+L  N  G  G K L+ +L
Sbjct: 1013 DGLKDSK-LEKLSLSDCSISEEGCKALTSALRSNPSHLIELNLGGNDPGQSGVKELTNLL 1071

Query: 468  K-FHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEVCSGCNGLSF- 524
            +  H  + TL+L  C++       V   L+ N + +  L+L  N L D   SG   LS+ 
Sbjct: 1072 QDPHCTLKTLRLSSCEMTDEACSAVTSALKSNPSHLRELNLSYNKLGD---SGVKNLSYL 1128

Query: 525  FHSAIYSLKHMLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
                 + L+ +    LC   +   +C  L  + K     L  ++L+ NE+ D G   ++ 
Sbjct: 1129 LMKPQFKLEKL---HLCNCSITEEQCVILTSALKSNPSHLRELNLSCNELADSGVKNLSD 1185

Query: 583  AL 584
             L
Sbjct: 1186 LL 1187



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 23/324 (7%)

Query: 151  KQTLNEFAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            +++ +  A  LR+ SS    +D+S  N  D G+  L++ L  +   E++S +   I+  G
Sbjct: 976  EESCSALASVLRSESSSLKDLDLSNNNLQDSGVKRLSDGLK-DSKLEKLSLSDCSISEEG 1034

Query: 207  IKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
             KA    L+SN + L  LNL GN  G  GVK L ++L D +  ++ L+LSS ++ DE   
Sbjct: 1035 CKALTSALRSNPSHLIELNLGGNDPGQSGVKELTNLLQDPHCTLKTLRLSSCEMTDEACS 1094

Query: 265  AIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENS-TIRSLHLNGNYGGALGANAL 322
            A+   LK+N S LR L L+ N +  SG  +L+  L++    +  LHL            L
Sbjct: 1095 AVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKLEKLHLCNCSITEEQCVIL 1154

Query: 323  AKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
               L+ N S LREL+L  N + D G++ L   L   + +L  L +   SI+ K    +  
Sbjct: 1155 TSALKSNPSHLRELNLSCNELADSGVKNLSDLLMKPQFRLEKLHLYKCSITEKQCKILTS 1214

Query: 382  YIK-NCKSLLWINLYMNDIGDEGAEKIADALKQN----RTITTIDLGGNNIHSKGASAIA 436
             +K N   L  +NL  N I + G   + D LK +    +T+  +  G +++     S++ 
Sbjct: 1215 ALKSNPSHLRELNLSENQIRNTGVNLLCDVLKDSHCKLKTLRLLCCGISDV-----SSLT 1269

Query: 437  RVLKDNSVITSL---DLAYNPIGA 457
            + LK+   +  L   +L+YN I A
Sbjct: 1270 QCLKNTKALQFLKEVNLSYNSIEA 1293



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 44/376 (11%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRS 306
             +R  L+  +L ++   A+  +L++++ L+VL ++NN +  SG   L   + +    +  
Sbjct: 791  CKRALLNDCNLTEKSCSALTSVLRSDTNLKVLNMSNNNLQDSGLRLLCSGMKDIKCELEV 850

Query: 307  LHLNGNYGGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L+         +ALA  L  G  SL++L L  N++ + G++ L  GL      L  L 
Sbjct: 851  LRLSKCDLTEESCSALASVLSSGFNSLKDLDLSNNNLQNSGVKLLSDGLKDSNCTLEKLG 910

Query: 366  IGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLG 423
            + + +IS +G   +A  ++ N   L+ ++L  ND G  G +++A+ L+     + T+ L 
Sbjct: 911  LSDCNISEEGYKALASALRSNPSHLIELDLRGNDPGQSGVKELAELLQDPHCKLKTLRLR 970

Query: 424  GNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
               +  +  SA+A VL+ ++S +  LDL+ N +   G K LS+ LK    +  L L  C 
Sbjct: 971  NCALREESCSALASVLRSESSSLKDLDLSNNNLQDSGVKRLSDGLK-DSKLEKLSLSDCS 1029

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
            I   G + +   LR N +  +++L   G  D   SG   L+                   
Sbjct: 1030 ISEEGCKALTSALRSNPS-HLIELNLGG-NDPGQSGVKELT------------------- 1068

Query: 543  NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            N LQ   C           L ++ L+  E+ D+   A+  ALK+N    +  LNL+ N  
Sbjct: 1069 NLLQDPHC----------TLKTLRLSSCEMTDEACSAVTSALKSNPS-HLRELNLSYN-- 1115

Query: 603  TKFGQSALTDAKDLVY 618
             K G S +   K+L Y
Sbjct: 1116 -KLGDSGV---KNLSY 1127


>gi|189502473|ref|YP_001958190.1| hypothetical protein Aasi_1120 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497914|gb|ACE06461.1| hypothetical protein Aasi_1120 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 781

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 209/441 (47%), Gaps = 49/441 (11%)

Query: 150 SKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           S Q   EF K L+      V++S    G +G    A+ L   +    V+ + N I   G 
Sbjct: 304 SDQGAEEFGKHLQGTNVHMVNLSNNQIGAQGAEGFAKHLKRTKV-HAVNLSFNNIGNQGA 362

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           + F   L+    + T+NLSGN IG++G +     L +   V  + LS  ++ D+GA+   
Sbjct: 363 EEFGKHLKE-TRVHTVNLSGNEIGNQGAEEFGKHLQETQ-VHTVDLSGNEIDDQGAEGFT 420

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           + L+   + + + L+ N I   G    A+ L E + + +++L+ N     GA   AK L+
Sbjct: 421 KHLQGTQV-QAVNLSFNNISDQGAEGFAKHLKE-TKVHTVNLSYNQISDQGAEGFAKHLQ 478

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
               +  + L GN IGD+GI      L      +  L +  N I  +GA    +++K  +
Sbjct: 479 -ETQVHTVDLSGNQIGDQGIEEFGKHLQGTN--VHTLVLSENQIDDQGAEEFGKHLKETR 535

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            +  ++L  N IGD+GAE  A  LK+ + + T++L GN I ++GA  +A+ L+   V T 
Sbjct: 536 -VHTVDLSKNYIGDQGAEGFAKYLKETQ-VHTVNLSGNQIGAEGAVGLAKNLQGTQVHT- 592

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           ++L+ N IGA GA+ L++ L+    ++TL L   +IGA  AE +A  L+    +  L L 
Sbjct: 593 VNLSGNVIGAQGAEGLAKHLQG-TKVHTLHLAGNRIGAQCAEALAKHLQ-GTKVHTLHLS 650

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            N +      G  G   F                  +LQG +            + ++DL
Sbjct: 651 MNQI------GAQGAEGF----------------AKHLQGTQ------------VHTVDL 676

Query: 568 AFNEIRDDGAFAIAQALKANE 588
           ++N+I D GA A+A+ L+  +
Sbjct: 677 SYNQIGDQGAEALAKHLQGTQ 697



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 15/319 (4%)

Query: 150 SKQTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAG 206
           S Q    FAK L+     +VD+SG   GD+G+    + L G N     +  + N I   G
Sbjct: 466 SDQGAEGFAKHLQETQVHTVDLSGNQIGDQGIEEFGKHLQGTN--VHTLVLSENQIDDQG 523

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            + F   L+    + T++LS N IGD+G +     L +   V  + LS   +  EGA  +
Sbjct: 524 AEEFGKHLKE-TRVHTVDLSKNYIGDQGAEGFAKYLKETQ-VHTVNLSGNQIGAEGAVGL 581

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           A+ L+   +   + L+ N+I   G   LA+ L + + + +LHL GN  GA  A ALAK L
Sbjct: 582 AKNLQGTQV-HTVNLSGNVIGAQGAEGLAKHL-QGTKVHTLHLAGNRIGAQCAEALAKHL 639

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           +G K +  LHL  N IG +G       L     ++  +D+  N I  +GA  +A++++  
Sbjct: 640 QGTK-VHTLHLSMNQIGAQGAEGFAKHLQGT--QVHTVDLSYNQIGDQGAEALAKHLQGT 696

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           +    I L  N IG +GAE+ A  L Q   + T++L  N+I  +GA   A+ LK  +V T
Sbjct: 697 QMHTVI-LAGNHIGAQGAEEFAKHL-QGTQVYTVNLSENHIDGQGAEGFAKHLKGTNVHT 754

Query: 447 SLDLAYNPIGADGAKALSE 465
            ++L++N IGAD  K L +
Sbjct: 755 -VNLSFNSIGADIQKLLKD 772



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 14/347 (4%)

Query: 152 QTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           Q   EF K L+     +VD+SG    D+G     + L   Q  + V+ + N I+  G + 
Sbjct: 387 QGAEEFGKHLQETQVHTVDLSGNEIDDQGAEGFTKHLQGTQV-QAVNLSFNNISDQGAEG 445

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   L+    + T+NLS N I D+G +     L +   V  + LS   + D+G +   + 
Sbjct: 446 FAKHLKE-TKVHTVNLSYNQISDQGAEGFAKHLQETQ-VHTVDLSGNQIGDQGIEEFGKH 503

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L+  ++   L L+ N ID  G     + L E + + ++ L+ NY G  GA   AK L+  
Sbjct: 504 LQGTNV-HTLVLSENQIDDQGAEEFGKHLKE-TRVHTVDLSKNYIGDQGAEGFAKYLK-E 560

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             +  ++L GN IG EG   L   L   +  +  +++  N I A+GA  +A++++  K +
Sbjct: 561 TQVHTVNLSGNQIGAEGAVGLAKNLQGTQ--VHTVNLSGNVIGAQGAEGLAKHLQGTK-V 617

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L  N IG + AE +A  L Q   + T+ L  N I ++GA   A+ L+   V T +D
Sbjct: 618 HTLHLAGNRIGAQCAEALAKHL-QGTKVHTLHLSMNQIGAQGAEGFAKHLQGTQVHT-VD 675

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           L+YN IG  GA+AL++ L+    ++T+ L    IGA GAE  A  L+
Sbjct: 676 LSYNQIGDQGAEALAKHLQG-TQMHTVILAGNHIGAQGAEEFAKHLQ 721



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 46/307 (14%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L+ N I D+G       L      + ++++ NN I A+GA   A+++K  K +  +NL  
Sbjct: 298 LNENQISDQGAEEFGKHLQGTN--VHMVNLSNNQIGAQGAEGFAKHLKRTK-VHAVNLSF 354

Query: 397 NDIGDEGAEKIADALKQNRTIT--------------------------TIDLGGNNIHSK 430
           N+IG++GAE+    LK+ R  T                          T+DL GN I  +
Sbjct: 355 NNIGNQGAEEFGKHLKETRVHTVNLSGNEIGNQGAEEFGKHLQETQVHTVDLSGNEIDDQ 414

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA    + L+   V  +++L++N I   GA+  ++ LK    ++T+ L + QI   GAE 
Sbjct: 415 GAEGFTKHLQGTQV-QAVNLSFNNISDQGAEGFAKHLK-ETKVHTVNLSYNQISDQGAEG 472

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK-HMLFYSLCINYLQGAK 549
            A  L+    +  +DL  N + D+      G+  F   +     H L  S      QGA+
Sbjct: 473 FAKHLQ-ETQVHTVDLSGNQIGDQ------GIEEFGKHLQGTNVHTLVLSENQIDDQGAE 525

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
              +  K     + ++DL+ N I D GA   A+ LK   +  V ++NL+ N +   G   
Sbjct: 526 EFGKHLKETR--VHTVDLSKNYIGDQGAEGFAKYLK---ETQVHTVNLSGNQIGAEGAVG 580

Query: 610 LTDAKDL 616
           L  AK+L
Sbjct: 581 L--AKNL 585



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 17/196 (8%)

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           Q   + T+DL  N I  +GA    + L+  +V   ++L+ N IGA GA+  ++ LK    
Sbjct: 289 QGTNVHTVDLNENQISDQGAEEFGKHLQGTNV-HMVNLSNNQIGAQGAEGFAKHLK-RTK 346

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           ++ + L +  IG  GAE     L+    +  ++L  N +      G  G   F   +   
Sbjct: 347 VHAVNLSFNNIGNQGAEEFGKHLK-ETRVHTVNLSGNEI------GNQGAEEFGKHLQET 399

Query: 533 KHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
           + +    L  N +  QGA+   +  +     + +++L+FN I D GA   A+ LK   + 
Sbjct: 400 Q-VHTVDLSGNEIDDQGAEGFTKHLQ--GTQVQAVNLSFNNISDQGAEGFAKHLK---ET 453

Query: 591 AVTSLNLANNFLTKFG 606
            V ++NL+ N ++  G
Sbjct: 454 KVHTVNLSYNQISDQG 469


>gi|156354305|ref|XP_001623338.1| predicted protein [Nematostella vectensis]
 gi|156210026|gb|EDO31238.1| predicted protein [Nematostella vectensis]
          Length = 376

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 179/363 (49%), Gaps = 9/363 (2%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E   +  + + V +     G  G+  LA +L  N+T   +      +T+   +A   +
Sbjct: 9   LAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAIGEM 68

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  + +L L G  +GD G + +   L  N  + +L ++   +   G KAI ++++N 
Sbjct: 69  LRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVIQN- 127

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSL 332
             +  L L++N + Y G  ++A  L+++ S ++ L L+       GA  LA  L  N  L
Sbjct: 128 --VTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELAIALSRNSCL 185

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            EL +  N I DEG+ AL   ++S +  L VL I  N++       + E +++  ++  +
Sbjct: 186 EELSVACNDINDEGMCALAESVASNE-TLQVLYITYNNVGQNAGRAIGEMLRHNTTVTSL 244

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L    +GD GA  IA  L Q RTI  + +  ++I + G  AI +V+++   +T L+L+ 
Sbjct: 245 FLSGGRLGDSGARGIALGLAQKRTIAQLSIANSSIGTAGIKAITKVIQN---VTRLNLSG 301

Query: 453 NPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           NP+G  G KA++ +L K    +  L L  C I   GA+ +A  L  N+ +  L +  N +
Sbjct: 302 NPVGYGGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSRNSCLEELSVACNDI 361

Query: 512 RDE 514
            DE
Sbjct: 362 NDE 364



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 37/329 (11%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           G +  E+ + + E  +     +S+ + G   GD G   +A  L  N T  ++S A + I 
Sbjct: 55  GNMTSEAGRAIGEMLRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIG 114

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD------------------- 244
            AGIKA   V+Q+   +  LNLS NP+G +GVK +  +LV                    
Sbjct: 115 TAGIKAITKVIQN---VTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFG 171

Query: 245 ----------NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
                     N+ +E L ++  D+ DEG  A+AE + +N  L+VL +  N +  +   ++
Sbjct: 172 AKELAIALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYITYNNVGQNAGRAI 231

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
            E L  N+T+ SL L+G   G  GA  +A GL   +++ +L +  +SIG  GI+A+   +
Sbjct: 232 GEMLRHNTTVTSLFLSGGRLGDSGARGIALGLAQKRTIAQLSIANSSIGTAGIKAITKVI 291

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            +    +  L++  N +   G   +A   +K+C  L ++ L   +I   GA+++A AL +
Sbjct: 292 QN----VTRLNLSGNPVGYGGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSR 347

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDN 442
           N  +  + +  N+I+ +G  A+A  +  N
Sbjct: 348 NSCLEELSVACNDINDEGMCALAESVASN 376



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 179/386 (46%), Gaps = 40/386 (10%)

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GD     L +IL DN  +  +++    L   G  ++A  LK N  +R L ++   +    
Sbjct: 2   GDSCAIKLAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEA 61

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             ++ E L  N+T+ SL L G   G  GA  +A GL  N ++ +L +  +SIG  GI+A+
Sbjct: 62  GRAIGEMLRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAI 121

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYMNDIGDEGAEKIAD 409
              + +    +  L++ +N +   G   +A   +K+C  L ++ L   +I + GA+++A 
Sbjct: 122 TKVIQN----VTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELAI 177

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           AL +N  +  + +  N+I+ +G  A+A  +  N  +  L + YN +G +  +A+ E+L+ 
Sbjct: 178 ALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYITYNNVGQNAGRAIGEMLRH 237

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI 529
           +  + +L L   ++G SGA  +A  L    TI+ L +  + +      G  G+      I
Sbjct: 238 NTTVTSLFLSGGRLGDSGARGIALGLAQKRTIAQLSIANSSI------GTAGIKAITKVI 291

Query: 530 YSLKHM----------------------------LFYSLCINYLQGAKCLAQSFKVVNEA 561
            ++  +                            LF   C   + GAK LA +    N  
Sbjct: 292 QNVTRLNLSGNPVGYGGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALS-RNSC 350

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKAN 587
           L  + +A N+I D+G  A+A+++ +N
Sbjct: 351 LEELSVACNDINDEGMCALAESVASN 376



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 42/320 (13%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAE L +N+++  + ++    G+ G  +LA  L+ NK++R L + G ++  E  RA    
Sbjct: 9   LAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRA---- 64

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                    + E +++  ++  + L    +GD GA  IA  L Q
Sbjct: 65  -------------------------IGEMLRHNTTVTSLFLRGGRLGDSGARGIAIGLAQ 99

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGN 472
           N TI  + +  ++I + G  AI +V+++   +T L+L+ NP+G DG KA++ +L K    
Sbjct: 100 NTTIAQLSIAHSSIGTAGIKAITKVIQN---VTRLNLSSNPVGYDGVKAIARLLVKSCSR 156

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           +  L L  C I   GA+ +A  L  N+ +  L +  N + DE      G+     ++ S 
Sbjct: 157 LKFLFLDHCNIDEFGAKELAIALSRNSCLEELSVACNDINDE------GMCALAESVASN 210

Query: 533 KHM-LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
           + + + Y    N  Q A          N  +TS+ L+   + D GA  IA  L     +A
Sbjct: 211 ETLQVLYITYNNVGQNAGRAIGEMLRHNTTVTSLFLSGGRLGDSGARGIALGLAQKRTIA 270

Query: 592 VTSLNLANNFLTKFGQSALT 611
              L++AN+ +   G  A+T
Sbjct: 271 --QLSIANSSIGTAGIKAIT 288



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 7/217 (3%)

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE + +  SL  + +    +G  G   +A+ALK N+T+ T+ + G N+ S+   AI
Sbjct: 6   AIKLAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAI 65

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
             +L+ N+ +TSL L    +G  GA+ ++  L  +  I  L +    IG +G + +  ++
Sbjct: 66  GEMLRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVI 125

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           +    ++ L+L +N +  +   G   ++       S    LF   C     GAK LA + 
Sbjct: 126 Q---NVTRLNLSSNPVGYD---GVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELAIAL 179

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
              N  L  + +A N+I D+G  A+A+++ +NE + V
Sbjct: 180 S-RNSCLEELSVACNDINDEGMCALAESVASNETLQV 215


>gi|290981746|ref|XP_002673592.1| predicted protein [Naegleria gruberi]
 gi|284087177|gb|EFC40848.1| predicted protein [Naegleria gruberi]
          Length = 817

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 169/348 (48%), Gaps = 15/348 (4%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           + A+++  +     +    N I   G++A    L+S   +K L+L  N +G E    + D
Sbjct: 60  YFAQTVSKDSPLHVLDLHENVIRDKGVQALIDELKSLNTVKILDLGSNDLGSESAILIAD 119

Query: 241 ILVD-NAGVERLQLSSVD-------LRDEGAKAIAELLKNNSILRVLELNNN----MIDY 288
            L   +  +E L L S D       +  EG  +IAE L +N  L  L+ N N        
Sbjct: 120 YLKKPDCKLESLILGSSDSDLYANKIEAEGGVSIAEALSSNFTLHTLDFNRNSQLGRKTQ 179

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
             F +LA+A  EN TI  L L     G++ A  + + LEGN +LR L LHGN +  + I 
Sbjct: 180 QAFFALADAFDENKTISCLRLGQTNMGSVAAVNVIQSLEGNSNLRYLDLHGNDLPVD-IA 238

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             +  L+     L+VL + NN +   GA  +  ++K    +  +NL  N+IG+EGA  +A
Sbjct: 239 ESLGKLTCTCKNLSVLLLQNNCLKQTGAEILCNFLKQNTFITVLNLAGNEIGNEGASYVA 298

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVL 467
           D L    T+  ++L  N I  +G   IA+ +    + + SL+L+ N +G  GAKAL++ +
Sbjct: 299 DYLSCKHTLVYLNLSKNQITEEGIITIAQAINCPQNTLHSLNLSNNRVGNSGAKALAKCV 358

Query: 468 KF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           ++    I  L+L  C IG  GA  +   L  N T+  + +  N + +E
Sbjct: 359 EYDQCGIVNLELNSCGIGDQGAVSLCLSLTCNTTLLYMKVHNNHISEE 406



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 162/362 (44%), Gaps = 79/362 (21%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK----GLEGNKSLRELHLHGNSIGDEGIR 348
           +L + L +N T     L     G   AN+LA+     +  +  L  L LH N I D+G++
Sbjct: 28  NLKQLLEKNCTEEKFILRSQRIGIATANSLARYFAQTVSKDSPLHVLDLHENVIRDKGVQ 87

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCK--SLLW----INLYMNDIG 400
           AL+  L S    + +LD+G+N + ++ A  +A+Y+K  +CK  SL+      +LY N I 
Sbjct: 88  ALIDELKSL-NTVKILDLGSNDLGSESAILIADYLKKPDCKLESLILGSSDSDLYANKIE 146

Query: 401 DEGAEKIA--------------------------------DALKQNRTITTIDLGGNNIH 428
            EG   IA                                DA  +N+TI+ + LG  N+ 
Sbjct: 147 AEGGVSIAEALSSNFTLHTLDFNRNSQLGRKTQQAFFALADAFDENKTISCLRLGQTNMG 206

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
           S  A  + + L+ NS +  LDL  N +  D A++L ++     N++ L L    +  +GA
Sbjct: 207 SVAAVNVIQSLEGNSNLRYLDLHGNDLPVDIAESLGKLTCTCKNLSVLLLQNNCLKQTGA 266

Query: 489 EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
           E + + L+ N  I++L+L  N +      G  G S+    + S KH L Y          
Sbjct: 267 EILCNFLKQNTFITVLNLAGNEI------GNEGASYVADYL-SCKHTLVY---------- 309

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
                           ++L+ N+I ++G   IAQA+   ++  + SLNL+NN +   G  
Sbjct: 310 ----------------LNLSKNQITEEGIITIAQAINCPQNT-LHSLNLSNNRVGNSGAK 352

Query: 609 AL 610
           AL
Sbjct: 353 AL 354



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 11/312 (3%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI----TAAGIKAFDGVLQSNIAL 220
           S  D+       EG   +AE+L  N T   + F  N      T     A       N  +
Sbjct: 136 SDSDLYANKIEAEGGVSIAEALSSNFTLHTLDFNRNSQLGRKTQQAFFALADAFDENKTI 195

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             L L    +G      +   L  N+ +  L L   DL  + A+++ +L      L VL 
Sbjct: 196 SCLRLGQTNMGSVAAVNVIQSLEGNSNLRYLDLHGNDLPVDIAESLGKLTCTCKNLSVLL 255

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN +  +G   L   L +N+ I  L+L GN  G  GA+ +A  L    +L  L+L  N
Sbjct: 256 LQNNCLKQTGAEILCNFLKQNTFITVLNLAGNEIGNEGASYVADYLSCKHTLVYLNLSKN 315

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCKSLLWINLYMND 398
            I +EGI  +   ++  +  L  L++ NN +   GA  +A+ ++   C     +NL +N 
Sbjct: 316 QITEEGIITIAQAINCPQNTLHSLNLSNNRVGNSGAKALAKCVEYDQCG---IVNLELNS 372

Query: 399 --IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IGD+GA  +  +L  N T+  + +  N+I  +   A+  +L+ N  + S D+  N + 
Sbjct: 373 CGIGDQGAVSLCLSLTCNTTLLYMKVHNNHISEEAGKAVLDLLEKNHTLMSFDVRGNQLD 432

Query: 457 ADGAKALSEVLK 468
                 + +VL+
Sbjct: 433 HPTYLKIKKVLQ 444



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 7/272 (2%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS---NIALKTLNLSGNPIGDE 233
           +  F LA++   N+T   +S    G T  G  A   V+QS   N  L+ L+L GN +  +
Sbjct: 180 QAFFALADAFDENKT---ISCLRLGQTNMGSVAAVNVIQSLEGNSNLRYLDLHGNDLPVD 236

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
             + L  +      +  L L +  L+  GA+ +   LK N+ + VL L  N I   G + 
Sbjct: 237 IAESLGKLTCTCKNLSVLLLQNNCLKQTGAEILCNFLKQNTFITVLNLAGNEIGNEGASY 296

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMS 352
           +A+ L    T+  L+L+ N     G   +A+ +     +L  L+L  N +G+ G +AL  
Sbjct: 297 VADYLSCKHTLVYLNLSKNQITEEGIITIAQAINCPQNTLHSLNLSNNRVGNSGAKALAK 356

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            +   +  +  L++ +  I  +GA  +   +    +LL++ ++ N I +E  + + D L+
Sbjct: 357 CVEYDQCGIVNLELNSCGIGDQGAVSLCLSLTCNTTLLYMKVHNNHISEEAGKAVLDLLE 416

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +N T+ + D+ GN +       I +VL+ N  
Sbjct: 417 KNHTLMSFDVRGNQLDHPTYLKIKKVLQRNKT 448



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 30/181 (16%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ- 215
           F K+    + ++++G   G+EG  ++A+ L    T   ++ + N IT  GI      +  
Sbjct: 272 FLKQNTFITVLNLAGNEIGNEGASYVADYLSCKHTLVYLNLSKNQITEEGIITIAQAINC 331

Query: 216 SNIALKTLNLSGNP-----------------------------IGDEGVKCLCDILVDNA 246
               L +LNLS N                              IGD+G   LC  L  N 
Sbjct: 332 PQNTLHSLNLSNNRVGNSGAKALAKCVEYDQCGIVNLELNSCGIGDQGAVSLCLSLTCNT 391

Query: 247 GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
            +  +++ +  + +E  KA+ +LL+ N  L   ++  N +D+  +  + + L  N T + 
Sbjct: 392 TLLYMKVHNNHISEEAGKAVLDLLEKNHTLMSFDVRGNQLDHPTYLKIKKVLQRNKTDKM 451

Query: 307 L 307
           L
Sbjct: 452 L 452


>gi|253723219|pdb|2BNH|A Chain A, Porcine Ribonuclease Inhibitor
 gi|313507173|pdb|1DFJ|I Chain I, Ribonuclease Inhibitor Complexed With Ribonuclease A
          Length = 457

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 10/320 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   Q   E++      +TAA  +    VL++ 
Sbjct: 106 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRAT 165

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            ALK L +S N IG+ G + L   L D+A  +E L+L +  L     K +  ++ + + L
Sbjct: 166 RALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASL 225

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L+L +N +  +G   L   LL   S +++L L      A G   L + L+  ++L+EL
Sbjct: 226 RELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKEL 285

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN +GDEG R L   L     +L  L + + S++A    HV+  +   K LL + L 
Sbjct: 286 SLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLS 345

Query: 396 MNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G +++  AL Q   T+  + LG   + + G S++A +L  N  +  LDL+ N 
Sbjct: 346 SNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNC 405

Query: 455 IGADGAKALSEVLKFHGNIN 474
           +G  G      VL+  G++ 
Sbjct: 406 VGDPG------VLQLLGSLE 419



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 175/372 (47%), Gaps = 8/372 (2%)

Query: 150 SKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAA 205
           +++   +    LRA    + + +     GD G+  + + L       +++S     +T A
Sbjct: 37  TEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCSLTEA 96

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
           G       L+S   L+ L+LS NP+GD G++ LC+ L+D    +E+LQL    L     +
Sbjct: 97  GCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCE 156

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            +A +L+    L+ L ++NN I  +G   L + L +++  + +L L            L 
Sbjct: 157 PLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLC 216

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             +    SLREL L  N +GD GI  L  GL S   +L  L +    I+A G   +   +
Sbjct: 217 GIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVL 276

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +  ++L  ++L  N +GDEGA  + ++L Q    + ++ +   ++ +     ++ +L  N
Sbjct: 277 QAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQN 336

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +  L L+ N +G  G + L + L   G  +  L LG C++  SG   +A +L  N ++
Sbjct: 337 KHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSL 396

Query: 502 SILDLRANGLRD 513
             LDL  N + D
Sbjct: 397 RELDLSNNCVGD 408



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 185/425 (43%), Gaps = 9/425 (2%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  E V     G+T    K     L++N +L  L L  N +GD GV   L  + 
Sbjct: 18  ELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQ 77

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
                +++L L +  L + G   +   L++   LR L L++N +  +G   L E LL+  
Sbjct: 78  SPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQ 137

Query: 303 T-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  L L      A     LA  L   ++L+EL +  N IG+ G R L  GL+    +L
Sbjct: 138 CHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQL 197

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTI 420
             L + N  ++      +   + +  SL  ++L  N +GD G AE     L     + T+
Sbjct: 198 ETLRLENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTL 257

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLG 479
            L   +I + G   + RVL+    +  L LA N +G +GA+ L E L   G  + +L + 
Sbjct: 258 WLWECDITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVK 317

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
            C + A+  + V+ ML  N  +  L L +N L D   SG   L    S   +   +L   
Sbjct: 318 SCSLTAACCQHVSLMLTQNKHLLELQLSSNKLGD---SGIQELCQALSQPGTTLRVLCLG 374

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            C     G   LA S  + N +L  +DL+ N + D G   +  +L+     A+  L L +
Sbjct: 375 DCEVTNSGCSSLA-SLLLANRSLRELDLSNNCVGDPGVLQLLGSLE-QPGCALEQLVLYD 432

Query: 600 NFLTK 604
            + T+
Sbjct: 433 TYWTE 437



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGIT 203
           +L   S + L    +  RA   + +S  + G+ G   L + L  +    E +     G+T
Sbjct: 149 RLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLT 208

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEG 262
            A  K   G++ S  +L+ L+L  N +GD G+  LC  L+  A  ++ L L   D+   G
Sbjct: 209 PANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASG 268

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
            + +  +L+    L+ L L  N +   G   L E+LL+    + SL +      A     
Sbjct: 269 CRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQH 328

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  NK L EL L  N +GD GI+ L   LS     L VL +G+  ++  G   +A 
Sbjct: 329 VSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLAS 388

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            +   +SL  ++L  N +GD G  ++  +L+Q
Sbjct: 389 LLLANRSLRELDLSNNCVGDPGVLQLLGSLEQ 420


>gi|132574|sp|P10775.1|RINI_PIG RecName: Full=Ribonuclease inhibitor; AltName:
           Full=Ribonuclease/angiogenin inhibitor 1
          Length = 456

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 10/320 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   Q   E++      +TAA  +    VL++ 
Sbjct: 105 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRAT 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            ALK L +S N IG+ G + L   L D+A  +E L+L +  L     K +  ++ + + L
Sbjct: 165 RALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L+L +N +  +G   L   LL   S +++L L      A G   L + L+  ++L+EL
Sbjct: 225 RELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN +GDEG R L   L     +L  L + + S++A    HV+  +   K LL + L 
Sbjct: 285 SLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLS 344

Query: 396 MNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G +++  AL Q   T+  + LG   + + G S++A +L  N  +  LDL+ N 
Sbjct: 345 SNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNC 404

Query: 455 IGADGAKALSEVLKFHGNIN 474
           +G  G      VL+  G++ 
Sbjct: 405 VGDPG------VLQLLGSLE 418



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 175/372 (47%), Gaps = 8/372 (2%)

Query: 150 SKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAA 205
           +++   +    LRA    + + +     GD G+  + + L       +++S     +T A
Sbjct: 36  TEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCSLTEA 95

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
           G       L+S   L+ L+LS NP+GD G++ LC+ L+D    +E+LQL    L     +
Sbjct: 96  GCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCE 155

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            +A +L+    L+ L ++NN I  +G   L + L +++  + +L L            L 
Sbjct: 156 PLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLC 215

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             +    SLREL L  N +GD GI  L  GL S   +L  L +    I+A G   +   +
Sbjct: 216 GIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVL 275

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +  ++L  ++L  N +GDEGA  + ++L Q    + ++ +   ++ +     ++ +L  N
Sbjct: 276 QAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQN 335

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +  L L+ N +G  G + L + L   G  +  L LG C++  SG   +A +L  N ++
Sbjct: 336 KHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSL 395

Query: 502 SILDLRANGLRD 513
             LDL  N + D
Sbjct: 396 RELDLSNNCVGD 407



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 185/425 (43%), Gaps = 9/425 (2%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  E V     G+T    K     L++N +L  L L  N +GD GV   L  + 
Sbjct: 17  ELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQ 76

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
                +++L L +  L + G   +   L++   LR L L++N +  +G   L E LL+  
Sbjct: 77  SPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQ 136

Query: 303 T-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  L L      A     LA  L   ++L+EL +  N IG+ G R L  GL+    +L
Sbjct: 137 CHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQL 196

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTI 420
             L + N  ++      +   + +  SL  ++L  N +GD G AE     L     + T+
Sbjct: 197 ETLRLENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTL 256

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLG 479
            L   +I + G   + RVL+    +  L LA N +G +GA+ L E L   G  + +L + 
Sbjct: 257 WLWECDITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVK 316

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
            C + A+  + V+ ML  N  +  L L +N L D   SG   L    S   +   +L   
Sbjct: 317 SCSLTAACCQHVSLMLTQNKHLLELQLSSNKLGD---SGIQELCQALSQPGTTLRVLCLG 373

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            C     G   LA S  + N +L  +DL+ N + D G   +  +L+     A+  L L +
Sbjct: 374 DCEVTNSGCSSLA-SLLLANRSLRELDLSNNCVGDPGVLQLLGSLE-QPGCALEQLVLYD 431

Query: 600 NFLTK 604
            + T+
Sbjct: 432 TYWTE 436



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGIT 203
           +L   S + L    +  RA   + +S  + G+ G   L + L  +    E +     G+T
Sbjct: 148 RLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLT 207

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEG 262
            A  K   G++ S  +L+ L+L  N +GD G+  LC  L+  A  ++ L L   D+   G
Sbjct: 208 PANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASG 267

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
            + +  +L+    L+ L L  N +   G   L E+LL+    + SL +      A     
Sbjct: 268 CRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQH 327

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  NK L EL L  N +GD GI+ L   LS     L VL +G+  ++  G   +A 
Sbjct: 328 VSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLAS 387

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            +   +SL  ++L  N +GD G  ++  +L+Q
Sbjct: 388 LLLANRSLRELDLSNNCVGDPGVLQLLGSLEQ 419


>gi|428177637|gb|EKX46516.1| hypothetical protein GUITHDRAFT_107721 [Guillardia theta CCMP2712]
          Length = 604

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 249/589 (42%), Gaps = 71/589 (12%)

Query: 41  FSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVS 100
            +G R C+RL RL+  A           +V   SQ+     TA V  ++ F     + V+
Sbjct: 1   MAGLRTCWRLYRLLPSAP----------KVLLFSQTGRDCPTATVSCLSRFGGRISI-VA 49

Query: 101 ATF---VLWKLVEKL-----LMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQ 152
            ++   +L  LV  L     L+    R +   A+GM                      K 
Sbjct: 50  QSYSANLLPALVNALEGGLHLVHMDLRSNNIGAQGM----------------------KL 87

Query: 153 TLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
            L+ F K  RA     + +   N  DEG   L + L      E ++ A NGI   G    
Sbjct: 88  LLDSFCKTPRAKELKYLSLDHNNISDEGALLLGDLLRTCPLIETLNVANNGIGYHGAAGL 147

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L     L   ++ GN  GDEG++ +   L     +++L L   ++  +GA+ +AE L
Sbjct: 148 AQSLPHCKYLSGFDIGGNGFGDEGIREMSTFLGQCKRLKQLSLRFNEIHVDGAENLAEHL 207

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
                L  L++  N ++ SG   ++  L   + +  L L+G      GA  LA+ +   K
Sbjct: 208 PRCDSLTHLQICRNKLECSGIRHISSCLPRCNQLSFLDLSGTCICNEGAAILAECIVLCK 267

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L+ L L  N IG EG   L S        L  LD+  N +  +G   ++  +  C+ L+
Sbjct: 268 KLQHLDLRDNKIGVEGASRLSSSF-KHCNLLEFLDLSKNGLGDQGVEGLSSGLTWCERLV 326

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L MN  GD GA  +   ++   ++  + L  N I  +GA A++  L     +  +DL
Sbjct: 327 HLALGMNGFGDRGATSLGRQVRS--SLQHLFLANNKISDRGAEALSSSLCGCPELAIVDL 384

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI--LDLRA 508
            +N IGA G   L E       ++ +KL      A     VA + R +++ S+  L LR 
Sbjct: 385 RWNKIGASGGALLGE------RLSRVKL------ALAVNLVAGLARTSSSSSVRHLGLRH 432

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
           N + D       GL  F   + SL+ +    L  N +  QGA  LA+    + + +  +D
Sbjct: 433 NLVEDA------GLIGFSPMLSSLRSLAIIDLSCNRIGNQGALALAEVLPKLRQ-IVRVD 485

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
           L  N I D GA A+A++L      A++SL++  N     G  +L  A++
Sbjct: 486 LRENGIGDFGAMALAESLPCCP--ALSSLDIRINCFGAAGARSLRMAEE 532



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 152/393 (38%), Gaps = 77/393 (19%)

Query: 162 RAFSSVDMSGRNFGDEGL-----FF-----------------------LAESLGYNQTAE 193
           +  S  D+ G  FGDEG+     F                        LAE L    +  
Sbjct: 155 KYLSGFDIGGNGFGDEGIREMSTFLGQCKRLKQLSLRFNEIHVDGAENLAEHLPRCDSLT 214

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +    N +  +GI+     L     L  L+LSG  I +EG   L + +V    ++ L L
Sbjct: 215 HLQICRNKLECSGIRHISSCLPRCNQLSFLDLSGTCICNEGAAILAECIVLCKKLQHLDL 274

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               +  EGA  ++   K+ ++L  L+L+ N +   G   L+  L     +  L L  N 
Sbjct: 275 RDNKIGVEGASRLSSSFKHCNLLEFLDLSKNGLGDQGVEGLSSGLTWCERLVHLALGMNG 334

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA +L  G +   SL+ L L  N I D G  AL S L     +LA++D+  N I A
Sbjct: 335 FGDRGATSL--GRQVRSSLQHLFLANNKISDRGAEALSSSLCGCP-ELAIVDLRWNKIGA 391

Query: 374 KGAFHVAEYIKNCK---------------------------------------------- 387
            G   + E +   K                                              
Sbjct: 392 SGGALLGERLSRVKLALAVNLVAGLARTSSSSSVRHLGLRHNLVEDAGLIGFSPMLSSLR 451

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           SL  I+L  N IG++GA  +A+ L + R I  +DL  N I   GA A+A  L     ++S
Sbjct: 452 SLAIIDLSCNRIGNQGALALAEVLPKLRQIVRVDLRENGIGDFGAMALAESLPCCPALSS 511

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           LD+  N  GA GA++L    +   ++     GW
Sbjct: 512 LDIRINCFGAAGARSLRMAEERKKSVTISMEGW 544


>gi|300691655|ref|YP_003752650.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299078715|emb|CBJ51374.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
           solanacearum PSI07]
          Length = 608

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 207/450 (46%), Gaps = 104/450 (23%)

Query: 156 EFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E A+ L A    +S+ + G   GD      AE+L  +Q+ + +  +AN I   G +A  G
Sbjct: 202 EGAQRLAASTSLASLSLIGCEIGDRA----AEALAASQSIKSLDLSANRIGRDGARALAG 257

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
                  L +LNL  N IGDEG + L         +  L LSS  + D GA A+A+    
Sbjct: 258 A-----PLVSLNLYSNAIGDEGARALATSRT----LTSLNLSSNGIDDAGAGALAD---- 304

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N++L  L L  N I   G    A+AL  ++++  L L  N  G  GA ALA    G+KSL
Sbjct: 305 NTLLTQLNLQGNRIGRGG----AQALANSTSLTDLDLGNNRLGDRGARALA----GSKSL 356

Query: 333 RELHLHGNSIGDEGIRAL-----------------MSGLSSRKGK--LAVLDIGNNSISA 373
             L + GN IGD+G +AL                 + G+ +  G   L+VLD+    I +
Sbjct: 357 TSLSVRGNEIGDKGAKALARNATLKSLNLSYNLISLRGVRALGGSATLSVLDLCACDIDS 416

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  +A       SL  + L  N IGD GA     AL +N T+T + L GN IH+ GA 
Sbjct: 417 SGASALARN----ASLASLYLGSNRIGDRGAR----ALAKNSTLTRLALSGNGIHTTGAQ 468

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           A+A     N  + SLDL  N I  DGA AL+     H  + +L L   +I ++GA+ +A 
Sbjct: 469 ALA----GNDSLISLDLGGNEIDDDGAAALAR----HPRLISLDLRGNRIRSAGAQQLA- 519

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
               + T++ LDL AN +  E                                GA+ L++
Sbjct: 520 ---KSATLAELDLSANRIGAE--------------------------------GAEALSR 544

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
           S       LT+++++ N I D GA A+A++
Sbjct: 545 ST-----VLTTLNVSDNAIGDAGALALAKS 569


>gi|320168146|gb|EFW45045.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 645

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 1/228 (0%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           ++L+L    I  +   ++AEA+  N+T+  L L GN    +GA A+A+ +  N +L  + 
Sbjct: 23  QLLDLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVD 82

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD G RA    L      L  LD+  N I   GA  +AE +K  K+L  + L+ 
Sbjct: 83  LAENRIGDAGARAFAETLKV-NNTLTKLDLNENQIGDAGAQAIAEALKVNKTLTVLYLWH 141

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG  GA+ IADALK N T+T + L  N I   GA AIA  L+ N+ +T L L  N I 
Sbjct: 142 NQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQAIAEALEVNTTLTKLYLWENQIT 201

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
             GA+AL+E LK +  +  L LG  QIG +GA  +A+ L+ N T+++L
Sbjct: 202 CTGAQALAEALKANTTLTELTLGENQIGDAGARAIAEALKVNETLTML 249



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 285 MIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           M+ Y   T   + L +      + L L     G   A A+A+ ++ N ++ EL L GN I
Sbjct: 1   MLSYQNMTEKQQKLFDMVEDASQLLDLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLI 60

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D G RA+   + +    L V+D+  N I   GA   AE +K   +L  ++L  N IGD 
Sbjct: 61  ADVGARAIAEAVRA-NCTLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDA 119

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N+T+T + L  N I + GA AIA  LK N+ +T L L  NPIG DGA+A
Sbjct: 120 GAQAIAEALKVNKTLTVLYLWHNQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQA 179

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           ++E L+ +  +  L L   QI  +GA+ +A+ L+ N T++ L L  N + D
Sbjct: 180 IAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTTLTELTLGENQIGD 230



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/248 (38%), Positives = 135/248 (54%), Gaps = 8/248 (3%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +LD+    I    A  VAE IK   ++  + L  N I D GA  IA+A++ N T+T +DL
Sbjct: 24  LLDLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDL 83

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   GA A A  LK N+ +T LDL  N IG  GA+A++E LK +  +  L L   Q
Sbjct: 84  AENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDAGAQAIAEALKVNKTLTVLYLWHNQ 143

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           IGA+GA+ +AD L+ N T++ L L  N + D+   G   ++       +L  +  +   I
Sbjct: 144 IGAAGAQAIADALKVNTTLTELYLYKNPIGDD---GAQAIAEALEVNTTLTKLYLWENQI 200

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
               GA+ LA++ K  N  LT + L  N+I D GA AIA+ALK NE +   ++ L NNFL
Sbjct: 201 T-CTGAQALAEALK-ANTTLTELTLGENQIGDAGARAIAEALKVNETL---TMLLNNNFL 255

Query: 603 TKFGQSAL 610
           T  G +A 
Sbjct: 256 TTDGIAAF 263



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 146/302 (48%), Gaps = 35/302 (11%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E +Q L +  ++  A   +D+  +  G+     +AE++  N T  E+    N I   G +
Sbjct: 9   EKQQKLFDMVED--ASQLLDLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGAR 66

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    +++N  L  ++L+ N IGD G +   + L  N  + +L L+   + D GA+AIAE
Sbjct: 67  AIAEAVRANCTLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDAGAQAIAE 126

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  L VL L +N I  +G  ++A+AL  N+T+  L+L  N  G  GA A+A+ LE 
Sbjct: 127 ALKVNKTLTVLYLWHNQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQAIAEALEV 186

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L +L+L                               N I+  GA  +AE +K   +
Sbjct: 187 NTTLTKLYLW-----------------------------ENQITCTGAQALAEALKANTT 217

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  + L  N IGD GA  IA+ALK N T+T + L  N + + G   IA   +  + I  L
Sbjct: 218 LTELTLGENQIGDAGARAIAEALKVNETLTML-LNNNFLTTDG---IAAFRQTGNAICDL 273

Query: 449 DL 450
           DL
Sbjct: 274 DL 275


>gi|164639|gb|AAA63448.1| ribonuclease inhibitor, partial [Sus scrofa]
          Length = 375

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 10/320 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   Q   E++      +TAA  +    VL++ 
Sbjct: 24  RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRAT 83

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            ALK L +S N IG+ G + L   L D+A  +E L+L +  L     K +  ++ + + L
Sbjct: 84  RALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASL 143

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L+L +N +  +G   L   LL   S +++L L      A G   L + L+  ++L+EL
Sbjct: 144 RELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKEL 203

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN +GDEG R L   L     +L  L + + S++A    HV+  +   K LL + L 
Sbjct: 204 SLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLS 263

Query: 396 MNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G +++  AL Q   T+  + LG   + + G S++A +L  N  +  LDL+ N 
Sbjct: 264 SNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNC 323

Query: 455 IGADGAKALSEVLKFHGNIN 474
           +G  G      VL+  G++ 
Sbjct: 324 VGDPG------VLQLLGSLE 337



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 158/325 (48%), Gaps = 4/325 (1%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           +++S     +T AG       L+S   L+ L+LS NP+GD G++ LC+ L+D    +E+L
Sbjct: 2   QKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKL 61

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
           QL    L     + +A +L+    L+ L ++NN I  +G   L + L +++  + +L L 
Sbjct: 62  QLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLE 121

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                      L   +    SLREL L  N +GD GI  L  GL S   +L  L +    
Sbjct: 122 NCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECD 181

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHS 429
           I+A G   +   ++  ++L  ++L  N +GDEGA  + ++L Q    + ++ +   ++ +
Sbjct: 182 ITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTA 241

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGA 488
                ++ +L  N  +  L L+ N +G  G + L + L   G  +  L LG C++  SG 
Sbjct: 242 ACCQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGC 301

Query: 489 EFVADMLRYNNTISILDLRANGLRD 513
             +A +L  N ++  LDL  N + D
Sbjct: 302 SSLASLLLANRSLRELDLSNNCVGD 326



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGIT 203
           +L   S + L    +  RA   + +S  + G+ G   L + L  +    E +     G+T
Sbjct: 67  RLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLT 126

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEG 262
            A  K   G++ S  +L+ L+L  N +GD G+  LC  L+  A  ++ L L   D+   G
Sbjct: 127 PANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASG 186

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
            + +  +L+    L+ L L  N +   G   L E+LL+    + SL +      A     
Sbjct: 187 CRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQH 246

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  NK L EL L  N +GD GI+ L   LS     L VL +G+  ++  G   +A 
Sbjct: 247 VSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLAS 306

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            +   +SL  ++L  N +GD G  ++  +L+Q
Sbjct: 307 LLLANRSLRELDLSNNCVGDPGVLQLLGSLEQ 338



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 147/357 (41%), Gaps = 36/357 (10%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG------------- 325
           L L N  +  +G   L   L    T+R LHL+ N  G  G   L +G             
Sbjct: 4   LSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQL 63

Query: 326 ----------------LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
                           L   ++L+EL +  N IG+ G R L  GL+    +L  L + N 
Sbjct: 64  EYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENC 123

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTIDLGGNNIH 428
            ++      +   + +  SL  ++L  N +GD G AE     L     + T+ L   +I 
Sbjct: 124 GLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDIT 183

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASG 487
           + G   + RVL+    +  L LA N +G +GA+ L E L   G  + +L +  C + A+ 
Sbjct: 184 ASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAAC 243

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG 547
            + V+ ML  N  +  L L +N L D   SG   L    S   +   +L    C     G
Sbjct: 244 CQHVSLMLTQNKHLLELQLSSNKLGD---SGIQELCQALSQPGTTLRVLCLGDCEVTNSG 300

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
              LA S  + N +L  +DL+ N + D G   +  +L+     A+  L L + + T+
Sbjct: 301 CSSLA-SLLLANRSLRELDLSNNCVGDPGVLQLLGSLE-QPGCALEQLVLYDTYWTE 355



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 29/316 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L   L    +LRELHL  N +GD G+R L  GL   +  L  L +    ++A    
Sbjct: 15  GCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCE 74

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
            +A  ++  ++L  + +  NDIG+ GA  +   L  +   + T+ L    +       + 
Sbjct: 75  PLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLC 134

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADML 495
            ++   + +  LDL  N +G  G   L   +L     + TL L  C I ASG   +  +L
Sbjct: 135 GIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVL 194

Query: 496 RYNNTISILDLRANGLRDE----VCS-----GCNGLSFF------------HSAIYSL-- 532
           +   T+  L L  N L DE    +C      GC   S +            H ++     
Sbjct: 195 QAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQN 254

Query: 533 KHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
           KH+L   L  N L   G + L Q+       L  + L   E+ + G  ++A  L AN   
Sbjct: 255 KHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANR-- 312

Query: 591 AVTSLNLANNFLTKFG 606
           ++  L+L+NN +   G
Sbjct: 313 SLRELDLSNNCVGDPG 328


>gi|195997527|ref|XP_002108632.1| hypothetical protein TRIADDRAFT_51747 [Trichoplax adhaerens]
 gi|190589408|gb|EDV29430.1| hypothetical protein TRIADDRAFT_51747 [Trichoplax adhaerens]
          Length = 574

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 132/234 (56%), Gaps = 1/234 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G +G   L   L++N  VERL ++   ++++GA+AIAE+L+ N  +R L +++N I   
Sbjct: 204 LGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENMYIRELNISDNFIGSE 263

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  + A+ L  N+T+R+L + GN+     A   A  L+ N +L  L L  N  G+ G  +
Sbjct: 264 GANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGELGAIS 323

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L +G++   G L V+D+  NSI  +G   +A+ ++   +L+ +NL  N I D GA  +A 
Sbjct: 324 LANGIAEN-GNLDVMDLSWNSIRGRGGVALAKSLRLNTTLVSLNLAWNGISDVGAFALAK 382

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            L++N T+  +D+  N I   GA  + + L  N+ +T   ++ NP+G  G +A+
Sbjct: 383 FLRKNTTLQRLDISNNRIGEIGAIKLGKCLGVNNALTHFKISTNPVGNKGVEAI 436



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 128/282 (45%), Gaps = 3/282 (1%)

Query: 161 LRAF--SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR F  S++ M     G +G   LA +L  N   E +  A N I   G +A   +LQ N+
Sbjct: 189 LRHFHESAIIMKHHGLGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENM 248

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            ++ LN+S N IG EG      +L  N  +  L +    + D+ A   A  LK N+ L  
Sbjct: 249 YIRELNISDNFIGSEGANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSY 308

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L++N     G  SLA  + EN  +  + L+ N     G  ALAK L  N +L  L+L 
Sbjct: 309 LDLSHNEFGELGAISLANGIAENGNLDVMDLSWNSIRGRGGVALAKSLRLNTTLVSLNLA 368

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D G  AL   L  +   L  LDI NN I   GA  + + +    +L    +  N 
Sbjct: 369 WNGISDVGAFALAKFL-RKNTTLQRLDISNNRIGEIGAIKLGKCLGVNNALTHFKISTNP 427

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           +G++G E I +  K N  +  + L    +  K    I  +++
Sbjct: 428 VGNKGVEAILNGAKNNDLLKVLGLEEITVSRKMHDEIEELME 469



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 116/239 (48%), Gaps = 11/239 (4%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           K+  L + +N I   GA  +AE ++    +  +N+  N IG EGA   A  L  N T+ T
Sbjct: 221 KVERLIVADNYIKEDGAQAIAEMLQENMYIRELNISDNFIGSEGANAFAKMLFSNTTLRT 280

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + + GN+I  + A+  A  LK N+ ++ LDL++N  G  GA +L+  +  +GN++ + L 
Sbjct: 281 LIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGELGAISLANGIAENGNLDVMDLS 340

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
           W  I   G   +A  LR N T+  L+L  NG+ D    G   L+ F     +L+ +   +
Sbjct: 341 WNSIRGRGGVALAKSLRLNTTLVSLNLAWNGISD---VGAFALAKFLRKNTTLQRLDISN 397

Query: 540 LCINYLQG---AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
             I  +      KCL      VN ALT   ++ N + + G  AI    K N+ + V  L
Sbjct: 398 NRIGEIGAIKLGKCLG-----VNNALTHFKISTNPVGNKGVEAILNGAKNNDLLKVLGL 451



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 1/233 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  +E      +++S    G EG    A+ L  N T   +    N IT      F 
Sbjct: 238 QAIAEMLQENMYIRELNISDNFIGSEGANAFAKMLFSNTTLRTLIIKGNHITDQNAATFA 297

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G L++N  L  L+LS N  G+ G   L + + +N  ++ + LS   +R  G  A+A+ L+
Sbjct: 298 GALKANTTLSYLDLSHNEFGELGAISLANGIAENGNLDVMDLSWNSIRGRGGVALAKSLR 357

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L L  N I   G  +LA+ L +N+T++ L ++ N  G +GA  L K L  N +
Sbjct: 358 LNTTLVSLNLAWNGISDVGAFALAKFLRKNTTLQRLDISNNRIGEIGAIKLGKCLGVNNA 417

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           L    +  N +G++G+ A+++G +     L VL +   ++S K    + E ++
Sbjct: 418 LTHFKISTNPVGNKGVEAILNG-AKNNDLLKVLGLEEITVSRKMHDEIEELME 469



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 35/236 (14%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           +  KGA  +A  + N   +  + +  N I ++GA+ IA+ L++N  I  +++  N I S+
Sbjct: 204 LGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENMYIRELNISDNFIGSE 263

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA+A A++L  N+ + +L +  N I    A   +  LK +  ++ L L   + G  GA  
Sbjct: 264 GANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGELGAIS 323

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +A+ +  N  + ++DL  N +R                                 +G   
Sbjct: 324 LANGIAENGNLDVMDLSWNSIRG--------------------------------RGGVA 351

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           LA+S + +N  L S++LA+N I D GAFA+A+ L+ N    +  L+++NN + + G
Sbjct: 352 LAKSLR-LNTTLVSLNLAWNGISDVGAFALAKFLRKN--TTLQRLDISNNRIGEIG 404



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 27/185 (14%)

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           + ++ +G  GA  L+  L  +  +  L +    I   GA+ +A+ML+ N  I  L++  N
Sbjct: 199 MKHHGLGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENMYIRELNISDN 258

Query: 510 GLRDEVCSGCNGLSFFHSAIYSL----KHM-----------LFYSLCINYLQ-------- 546
            +  E  +    + F ++ + +L     H+           L  +  ++YL         
Sbjct: 259 FIGSEGANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGE 318

Query: 547 -GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
            GA  LA      N  L  +DL++N IR  G  A+A++L+ N    + SLNLA N ++  
Sbjct: 319 LGAISLANGI-AENGNLDVMDLSWNSIRGRGGVALAKSLRLN--TTLVSLNLAWNGISDV 375

Query: 606 GQSAL 610
           G  AL
Sbjct: 376 GAFAL 380


>gi|440906587|gb|ELR56835.1| Ribonuclease inhibitor, partial [Bos grunniens mutus]
          Length = 460

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 170/356 (47%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L       +++S     +T AG  A  GVL+S   L+
Sbjct: 56  SLTELSLRTNELGDGGVLLVLQGLQSPTCKIQKLSLQNCCLTEAGCGALPGVLRSLPTLR 115

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ LC+ L+D    +E+LQL    L     + +A +L+    L+ L 
Sbjct: 116 ELHLSDNPLGDAGLRLLCEGLLDPQCRLEKLQLEYCSLTAASCEPLAAVLRATRDLKELV 175

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G  +L   L E++  + +L L      A     L   +    SL++L L  
Sbjct: 176 VSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGS 235

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL S   +L  L +    ++  G   +   ++  ++L  ++L  N +
Sbjct: 236 NRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRDLCRVLQAKEALKELSLAGNSL 295

Query: 400 GDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++L Q    + ++ +      +      + VL  N  +  L L+ NP+G  
Sbjct: 296 GDEGAQLLCESLLQPGCQLESLWVKSCGFTAACCQHFSSVLTQNKHLLELQLSSNPLGDA 355

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G   L + L   G +   L +G C++  S    +A +L  + ++  LDL  NGL D
Sbjct: 356 GVHVLCQALGQPGTVLRVLWVGDCELTNSSCGGLASLLLASPSLRELDLSNNGLGD 411



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 10/320 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   Q   E++      +TAA  +    VL++ 
Sbjct: 109 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCRLEKLQLEYCSLTAASCEPLAAVLRAT 168

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
             LK L +S N IG+ GV+ LC  L ++A  +E L+L +  L     K +  ++ + + L
Sbjct: 169 RDLKELVVSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASL 228

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L +N +  +G   L   LL  +S +R+L L        G   L + L+  ++L+EL
Sbjct: 229 KDLDLGSNRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRDLCRVLQAKEALKEL 288

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNS+GDEG + L   L     +L  L + +   +A    H +  +   K LL + L 
Sbjct: 289 SLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTAACCQHFSSVLTQNKHLLELQLS 348

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G   +  AL Q  T+   + +G   + +     +A +L  +  +  LDL+ N 
Sbjct: 349 SNPLGDAGVHVLCQALGQPGTVLRVLWVGDCELTNSSCGGLASLLLASPSLRELDLSNNG 408

Query: 455 IGADGAKALSEVLKFHGNIN 474
           +G  G      VL+  G++ 
Sbjct: 409 LGDPG------VLQLLGSLE 422



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 22/413 (5%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E L   Q  E V     G+T    K     LQ+N +L  L+L  N +GD GV     +LV
Sbjct: 21  ELLPLIQQYEVVRLDDCGLTEVRCKDIGSALQANASLTELSLRTNELGDGGV-----LLV 75

Query: 244 ------DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
                     +++L L +  L + G  A+  +L++   LR L L++N +  +G   L E 
Sbjct: 76  LQGLQSPTCKIQKLSLQNCCLTEAGCGALPGVLRSLPTLRELHLSDNPLGDAGLRLLCEG 135

Query: 298 LLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           LL+    +  L L      A     LA  L   + L+EL +  N IG+ G++AL  GL+ 
Sbjct: 136 LLDPQCRLEKLQLEYCSLTAASCEPLAAVLRATRDLKELVVSNNDIGEAGVQALCRGLAE 195

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNR 415
              +L  L + N  ++A     +   + +  SL  ++L  N +GD G AE     L  + 
Sbjct: 196 SACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGSNRLGDAGLAELCPGLLSPSS 255

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NIN 474
            + T+ L   ++   G   + RVL+    +  L LA N +G +GA+ L E L   G  + 
Sbjct: 256 QLRTLWLWECDLTVSGCRDLCRVLQAKEALKELSLAGNSLGDEGAQLLCESLLQPGCQLE 315

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           +L +  C   A+  +  + +L  N  +  L L +N L D   +G + L        ++  
Sbjct: 316 SLWVKSCGFTAACCQHFSSVLTQNKHLLELQLSSNPLGD---AGVHVLCQALGQPGTVLR 372

Query: 535 MLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           +L+   C   L  + C  LA S  + + +L  +DL+ N + D G   +  +L+
Sbjct: 373 VLWVGDC--ELTNSSCGGLA-SLLLASPSLRELDLSNNGLGDPGVLQLLGSLE 422


>gi|66814688|ref|XP_641523.1| hypothetical protein DDB_G0279741 [Dictyostelium discoideum AX4]
 gi|60469560|gb|EAL67550.1| hypothetical protein DDB_G0279741 [Dictyostelium discoideum AX4]
          Length = 1084

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 142/293 (48%), Gaps = 1/293 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL G   G + +K   +IL  N  +  L LSS  L +     +A+ +K N+ ++ L ++
Sbjct: 482 LNLDGINFGKKALKSFLNILARNQDLTELDLSSNQLCESNGTYLADFIKRNNSIQTLSIS 541

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN   Y     +AE+L  N +I S +L+      L    LAK L  N +L++L L    +
Sbjct: 542 NNDF-YEKAVDIAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHTKM 600

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
              GI     GL   K +L  L++ +  +  KGA  + E I++   L  + L  N I   
Sbjct: 601 SCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSILSS 660

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ I  ALK N T+  + LG N I  KG  +I++ LK N  +  L +  N I   G   
Sbjct: 661 GAKSIGKALKHNSTLKVLHLGYNEIGVKGLDSISKSLKTNKTLIELSVKNNLIPEKGGIV 720

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           L++ LK +  + T+ L    +G  G   ++ +L  N T++ +DL  N L  +V
Sbjct: 721 LTDSLKSNQKLETINLRGNFLGIKGGAAISKLLTTNQTLTNMDLSHNNLDKDV 773



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 154/303 (50%), Gaps = 3/303 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++ G NFG + L      L  NQ   E+  ++N +  +        ++ N +++TL++S
Sbjct: 482 LNLDGINFGKKALKSFLNILARNQDLTELDLSSNQLCESNGTYLADFIKRNNSIQTLSIS 541

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N   ++ V  + + L  N  +    LS     +   + +A+ L  N  L+ L L++  +
Sbjct: 542 NNDFYEKAVD-IAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHTKM 600

Query: 287 DYSGFTSLAEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             +G    A+ L EN   + SL+L+       GA  + + +  N  L  L+L+ NSI   
Sbjct: 601 SCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSILSS 660

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G +++   L      L VL +G N I  KG   +++ +K  K+L+ +++  N I ++G  
Sbjct: 661 GAKSIGKALK-HNSTLKVLHLGYNEIGVKGLDSISKSLKTNKTLIELSVKNNLIPEKGGI 719

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            + D+LK N+ + TI+L GN +  KG +AI+++L  N  +T++DL++N +  D    + +
Sbjct: 720 VLTDSLKSNQKLETINLRGNFLGIKGGAAISKLLTTNQTLTNMDLSHNNLDKDVIHKIHQ 779

Query: 466 VLK 468
           +LK
Sbjct: 780 LLK 782



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 140/276 (50%), Gaps = 3/276 (1%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L +F K   +  ++ +S  +F ++ +  +AESL YN++    + +    +    +     
Sbjct: 525 LADFIKRNNSIQTLSISNNDFYEKAVD-IAESLQYNKSITSFNLSHTKCSNLIGRVLAKS 583

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKN 272
           L  N  LK L LS   +   G+      L +N   +E L L   DL+D+GA  I E +++
Sbjct: 584 LCINHTLKKLILSHTKMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRS 643

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L LN+N I  SG  S+ +AL  NST++ LHL  N  G  G ++++K L+ NK+L
Sbjct: 644 NTHLTHLYLNSNSILSSGAKSIGKALKHNSTLKVLHLGYNEIGVKGLDSISKSLKTNKTL 703

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            EL +  N I ++G   L   L S + KL  +++  N +  KG   +++ +   ++L  +
Sbjct: 704 IELSVKNNLIPEKGGIVLTDSLKSNQ-KLETINLRGNFLGIKGGAAISKLLTTNQTLTNM 762

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           +L  N++  +   KI   LK+N+   + +L     H
Sbjct: 763 DLSHNNLDKDVIHKIHQLLKKNQITNSTNLTAQTNH 798



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 131/284 (46%), Gaps = 46/284 (16%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L G + G + +++ ++ L+ R   L  LD+ +N +      ++A++IK   S+  +++
Sbjct: 482 LNLDGINFGKKALKSFLNILA-RNQDLTELDLSSNQLCESNGTYLADFIKRNNSIQTLSI 540

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD----NSVITSLDL 450
             ND   E A  IA++L+ N++IT+ +L     H+K ++ I RVL      N  +  L L
Sbjct: 541 SNNDFY-EKAVDIAESLQYNKSITSFNLS----HTKCSNLIGRVLAKSLCINHTLKKLIL 595

Query: 451 AYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++  +   G    ++ LK +   + +L L    +   GA  + + +R N  ++ L L +N
Sbjct: 596 SHTKMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSN 655

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF 569
            +                                   GAK + ++ K  N  L  + L +
Sbjct: 656 SILSS--------------------------------GAKSIGKALKH-NSTLKVLHLGY 682

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           NEI   G  +I+++LK N+   +  L++ NN + + G   LTD+
Sbjct: 683 NEIGVKGLDSISKSLKTNK--TLIELSVKNNLIPEKGGIVLTDS 724



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 167/399 (41%), Gaps = 81/399 (20%)

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL-HGNSIGD-EGIRALMSGLSSRKGK 360
           +++++HL  N    L +  +++ L+   S+  L+L H  SI + E   AL   L +    
Sbjct: 176 SLQTVHLRLNTPQELVS--ISEALKQRHSIVHLNLSHNKSIKELESWIALGLALKAPNQT 233

Query: 361 LAVLDIGNNSISAKG-AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           L+ L++ +NS+  +G +  +++ IK  +S+ W+NL  N++  +    I DAL  N+TI T
Sbjct: 234 LSQLNLSHNSLGTEGLSLIISDIIKTNRSITWLNLSHNNLDQDDDHSIMDALLYNQTIQT 293

Query: 420 IDLGGN-----------------------------NIHSKGASAIARVLKDNSVITSLDL 450
           +DL  N                             N +    S I+R L+ N  +  +DL
Sbjct: 294 LDLSNNEYQLTLDISNRLNSFIENCQSITHLNFSRNSNRHPISGISRALQINQSLRHIDL 353

Query: 451 AYNPIGADGAKALSEVL---KFHGNINTLKLGWCQIGASGAEFVADML--RYNN------ 499
           ++  I    +  L + L   +F  +IN  +     +G +    + + L  RYN+      
Sbjct: 354 SFMSIAPQESTELIKTLIGSRFLTSINLQQTLLSTVGETFGISIVNSLAKRYNDYDLDEE 413

Query: 500 --TISILDLRANGLR-------------DEVCSGCNGLSFF-------------HSAIYS 531
              +S +D +++                +   +  N + F                  Y 
Sbjct: 414 DGCLSFVDSKSSTTTTTNTNTTTIPLDPNSQNTSANSICFTPSCSFSSSKSSLEDDEFYI 473

Query: 532 LKHMLFYSLCINYLQGAKCLAQSFKVV---NEALTSIDLAFNEIRDDGAFAIAQALKANE 588
             H    +L ++ +   K   +SF  +   N+ LT +DL+ N++ +     +A  +K N 
Sbjct: 474 APHNPILNLNLDGINFGKKALKSFLNILARNQDLTELDLSSNQLCESNGTYLADFIKRNN 533

Query: 589 DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
             ++ +L+++NN    F + A+  A+ L Y  S    N+
Sbjct: 534 --SIQTLSISNN---DFYEKAVDIAESLQYNKSITSFNL 567



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 96/428 (22%), Positives = 174/428 (40%), Gaps = 81/428 (18%)

Query: 245 NAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           N  + +L LS   L  EG +  I++++K N  +  L L++N +D     S+ +ALL N T
Sbjct: 231 NQTLSQLNLSHNSLGTEGLSLIISDIIKTNRSITWLNLSHNNLDQDDDHSIMDALLYNQT 290

Query: 304 IRSLHLNGN-YGGALG-ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR---K 358
           I++L L+ N Y   L  +N L   +E  +S+  L+   NS      R  +SG+S      
Sbjct: 291 IQTLDLSNNEYQLTLDISNRLNSFIENCQSITHLNFSRNS-----NRHPISGISRALQIN 345

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADAL---- 411
             L  +D+   SI+ + +  + + +   + L  INL    ++ +G+     I ++L    
Sbjct: 346 QSLRHIDLSFMSIAPQESTELIKTLIGSRFLTSINLQQTLLSTVGETFGISIVNSLAKRY 405

Query: 412 ------KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD---------------- 449
                 +++  ++ +D   +   +   +     L  NS  TS +                
Sbjct: 406 NDYDLDEEDGCLSFVDSKSSTTTTTNTNTTTIPLDPNSQNTSANSICFTPSCSFSSSKSS 465

Query: 450 --------LAYNPI----------GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
                     +NPI          G    K+   +L  + ++  L L   Q+  S   ++
Sbjct: 466 LEDDEFYIAPHNPILNLNLDGINFGKKALKSFLNILARNQDLTELDLSSNQLCESNGTYL 525

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI-YSLKH---------MLFYSLC 541
           AD ++ NN+I  L +  N   ++       L +  S   ++L H         +L  SLC
Sbjct: 526 ADFIKRNNSIQTLSISNNDFYEKAVDIAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLC 585

Query: 542 INYL-------------QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
           IN+               G    AQ  K     L S++L   +++D GA  I +A+++N 
Sbjct: 586 INHTLKKLILSHTKMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNT 645

Query: 589 DVAVTSLN 596
            +    LN
Sbjct: 646 HLTHLYLN 653



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 4/141 (2%)

Query: 217 NIALKTLNLSGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           N  L  LNLS N +G EG+   + DI+  N  +  L LS  +L  +   +I + L  N  
Sbjct: 231 NQTLSQLNLSHNSLGTEGLSLIISDIIKTNRSITWLNLSHNNLDQDDDHSIMDALLYNQT 290

Query: 276 LRVLELNNNMIDYS-GFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           ++ L+L+NN    +   ++   + +EN  +I  L+ + N       + +++ L+ N+SLR
Sbjct: 291 IQTLDLSNNEYQLTLDISNRLNSFIENCQSITHLNFSRN-SNRHPISGISRALQINQSLR 349

Query: 334 ELHLHGNSIGDEGIRALMSGL 354
            + L   SI  +    L+  L
Sbjct: 350 HIDLSFMSIAPQESTELIKTL 370


>gi|407410494|gb|EKF32905.1| hypothetical protein MOQ_003233, partial [Trypanosoma cruzi
           marinkellei]
          Length = 774

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 204/433 (47%), Gaps = 55/433 (12%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ +N   K   L  +  G    + +  IL +N     L LS   LRDEGA +IA+L
Sbjct: 162 FMELISANCRGKFFCLKESGFGPMCAEAIAHILSNNRKYTILDLSGNRLRDEGACSIAKL 221

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALA 323
           +K N  +  + L +N I + G  +LA ALLEN+T+ SL L      NGN+    GA A+ 
Sbjct: 222 IKINRTIVHVGLRSNDIGHIGGVALARALLENNTVVSLDLGAHSGINGNHIATEGAEAIG 281

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV--LDIGNNSISAKGAFHVAE 381
             L  NK L  L+L  N +G  G+  ++ GL    G  +V  LDI  N++   G   +A 
Sbjct: 282 IMLRANKVLSHLNLSSNGLGVSGVSFIVGGLD---GNCSVKHLDISVNNLGYAGIKALAP 338

Query: 382 YIKNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIA 436
            ++    +  ++L  N +GD G     + IA A++     +  ++L  N +  K A A+ 
Sbjct: 339 VLETT-CITHLSLQRNSMGDNGGMVLFQAIAGAIEDGEDKLEYLNLEVNELGEKTAKAMQ 397

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           RVL  ++ + +L L+YN  GA  +K + E L  +  + +L L +C+I  +    +   L 
Sbjct: 398 RVLSSSTALKTLRLSYNSFGA-ASKYIMEGLAENKYLRSLFLSFCEIREADGAAIGAALT 456

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
            N+T+  LDL  N L+D                                 G++ +A++ K
Sbjct: 457 ANSTLQHLDLSNNKLKD--------------------------------AGSQFIAEAMK 484

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
             NE L S++L+ N+I D G  AIA  L +N    +  LNL  N ++      L D   L
Sbjct: 485 -TNEGLISLNLSCNKIGDGGGKAIALFLTSNR--TLRELNLRRNCMSNVTGELLDD--QL 539

Query: 617 VYEMSEKEVNIFF 629
              M+ +++N+ F
Sbjct: 540 RVNMTLEKMNVGF 552



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 169/363 (46%), Gaps = 16/363 (4%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R ++ +D+SG    DEG   +A+ +  N+T   V   +N I   G  A    L  N  + 
Sbjct: 198 RKYTILDLSGNRLRDEGACSIAKLIKINRTIVHVGLRSNDIGHIGGVALARALLENNTVV 257

Query: 222 TLNL------SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +L+L      +GN I  EG + +  +L  N  +  L LSS  L   G   I   L  N  
Sbjct: 258 SLDLGAHSGINGNHIATEGAEAIGIMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNCS 317

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN----GNYGGALGANALAKGLE-GNK 330
           ++ L+++ N + Y+G  +LA  +LE + I  L L     G+ GG +   A+A  +E G  
Sbjct: 318 VKHLDISVNNLGYAGIKALA-PVLETTCITHLSLQRNSMGDNGGMVLFQAIAGAIEDGED 376

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L+L  N +G++  +A+   LSS    L  L +  NS  A   + + E +   K L 
Sbjct: 377 KLEYLNLEVNELGEKTAKAMQRVLSSSTA-LKTLRLSYNSFGAASKY-IMEGLAENKYLR 434

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L   +I +     I  AL  N T+  +DL  N +   G+  IA  +K N  + SL+L
Sbjct: 435 SLFLSFCEIREADGAAIGAALTANSTLQHLDLSNNKLKDAGSQFIAEAMKTNEGLISLNL 494

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTISILDLRAN 509
           + N IG  G KA++  L  +  +  L L   C    +G E + D LR N T+  +++  N
Sbjct: 495 SCNKIGDGGGKAIALFLTSNRTLRELNLRRNCMSNVTG-ELLDDQLRVNMTLEKMNVGFN 553

Query: 510 GLR 512
             R
Sbjct: 554 DFR 556



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  ++ +S  +FG    + + E L  N+    +  +   I  A   A    L +N  L+ 
Sbjct: 405 ALKTLRLSYNSFGAASKYIM-EGLAENKYLRSLFLSFCEIREADGAAIGAALTANSTLQH 463

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D G + + + +  N G+  L LS   + D G KAIA  L +N  LR L L 
Sbjct: 464 LDLSNNKLKDAGSQFIAEAMKTNEGLISLNLSCNKIGDGGGKAIALFLTSNRTLRELNLR 523

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALG-ANALAKGLEGNKSL 332
            N +       L + L  N T+  +++  N   Y   +G    LA+  E NKSL
Sbjct: 524 RNCMSNVTGELLDDQLRVNMTLEKMNVGFNDFRYKSLIGHRTTLARNAEKNKSL 577


>gi|449274817|gb|EMC83895.1| Putative protein C14orf166B [Columba livia]
          Length = 510

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 157/299 (52%), Gaps = 15/299 (5%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N+    +NL+ + +G +GVK +   LV N     L+L    +  EGA  +AE+L+ NS 
Sbjct: 94  QNLDKPYINLNHHGLGPKGVKAIAIALVSNTTTTHLELEDNCILAEGAICLAEMLRENSS 153

Query: 276 LRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L+VL ++NN +D +G  ++   LL+N S + +L L+GN  G   A   A+ L  N  +++
Sbjct: 154 LQVLNISNNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMSNYQVKK 213

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N   ++G + L   L+S   KL  LD+  N +  KGA  ++  ++   +L  +NL
Sbjct: 214 LDLSHNEFHEKGGQLLGQMLASNT-KLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNL 272

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IG+EGA  + +ALK N  +  +D+  N I+++GA  + R L+ N  +  L +A NP
Sbjct: 273 SWNGIGNEGALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLEVNGNLKILKMANNP 332

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASG--------AEFVADMLRYNNTISILD 505
           +  +GA AL  V+    N  ++     +I  SG          FV ++L   N I +LD
Sbjct: 333 LTVEGATAL--VVSVRKNAKSM---MEEINISGFNLQIPTIKYFVENVLVNENFIKLLD 386



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 3/216 (1%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGV 235
           EG   LAE L  N + + ++ + N +  AG +A   +L  N++ L TL LSGN  G+E  
Sbjct: 139 EGAICLAEMLRENSSLQVLNISNNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAA 198

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
               + L+ N  V++L LS  +  ++G + + ++L +N+ L  L+L+ N +   G   L+
Sbjct: 199 LYFAEALMSNYQVKKLDLSHNEFHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLS 258

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             L  N  ++ L+L+ N  G  GA AL + L+ N  L  L +  N I +EG + L  GL 
Sbjct: 259 VGLRVNDALKILNLSWNGIGNEGALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLE 318

Query: 356 SRKGKLAVLDIGNNSISAKGAFH-VAEYIKNCKSLL 390
              G L +L + NN ++ +GA   V    KN KS++
Sbjct: 319 VN-GNLKILKMANNPLTVEGATALVVSVRKNAKSMM 353



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 42/293 (14%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G +G++A+   L S       L++ +N I A+GA  +AE ++   SL  +N+
Sbjct: 101 INLNHHGLGPKGVKAIAIALVSNTTTTH-LELEDNCILAEGAICLAEMLRENSSLQVLNI 159

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +   GAE I   L  N + + T+ L GNN   + A   A  L  N  +  LDL++N
Sbjct: 160 SNNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMSNYQVKKLDLSHN 219

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  +  L L W  +   GA  ++  LR N+ + IL+L  NG+ +
Sbjct: 220 EFHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNLSWNGIGN 279

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           E                                GA  L ++ K+ N  L  +D++ N+I 
Sbjct: 280 E--------------------------------GALALGEALKL-NNVLVHLDISNNKIN 306

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT-----DAKDLVYEMS 621
           ++GA  + + L+ N ++ +  L +ANN LT  G +AL      +AK ++ E++
Sbjct: 307 NEGAKRLCRGLEVNGNLKI--LKMANNPLTVEGATALVVSVRKNAKSMMEEIN 357



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 5/290 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++    G +G+  +A +L  N T   +    N I A G      +L+ N +L+ LN+S
Sbjct: 101 INLNHHGLGPKGVKAIAIALVSNTTTTHLELEDNCILAEGAICLAEMLRENSSLQVLNIS 160

Query: 227 GNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +   G + +  +L+DN   +  LQLS  +  +E A   AE L +N  ++ L+L++N 
Sbjct: 161 NNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMSNYQVKKLDLSHNE 220

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L + L  N+ +  L L+ N+    GA  L+ GL  N +L+ L+L  N IG+E
Sbjct: 221 FHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNLSWNGIGNE 280

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L      L  LDI NN I+ +GA  +   ++   +L  + +  N +  EGA 
Sbjct: 281 GALALGEAL-KLNNVLVHLDISNNKINNEGAKRLCRGLEVNGNLKILKMANNPLTVEGAT 339

Query: 406 KIADALKQN--RTITTIDLGGNNIHSKGASA-IARVLKDNSVITSLDLAY 452
            +  ++++N    +  I++ G N+        +  VL + + I  LD  Y
Sbjct: 340 ALVVSVRKNAKSMMEEINISGFNLQIPTIKYFVENVLVNENFIKLLDGVY 389



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 116/236 (49%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + LN++ +   G  ++A AL+ N+T   L L  N   A GA  LA+ L  N SL+ L++ 
Sbjct: 101 INLNHHGLGPKGVKAIAIALVSNTTTTHLELEDNCILAEGAICLAEMLRENSSLQVLNIS 160

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +   G  A+ S L      L  L +  N+   + A + AE + +   +  ++L  N+
Sbjct: 161 NNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMSNYQVKKLDLSHNE 220

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             ++G + +   L  N  +  +DL  N++  KGA  ++  L+ N  +  L+L++N IG +
Sbjct: 221 FHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNLSWNGIGNE 280

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           GA AL E LK +  +  L +   +I   GA+ +   L  N  + IL +  N L  E
Sbjct: 281 GALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLEVNGNLKILKMANNPLTVE 336



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 125/235 (53%), Gaps = 13/235 (5%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           V+ +I+N     +INL  + +G +G + IA AL  N T T ++L  N I ++GA  +A +
Sbjct: 89  VSYFIQNLDKP-YINLNHHGLGPKGVKAIAIALVSNTTTTHLELEDNCILAEGAICLAEM 147

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRY 497
           L++NS +  L+++ N +   GA+A++ +L  + + ++TL+L     G   A + A+ L  
Sbjct: 148 LRENSSLQVLNISNNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMS 207

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSF 555
           N  +  LDL  N   ++      G       + S   + F  L  N+L+  GA  L+   
Sbjct: 208 NYQVKKLDLSHNEFHEK------GGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGL 261

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           +V N+AL  ++L++N I ++GA A+ +ALK N    +  L+++NN +   G   L
Sbjct: 262 RV-NDALKILNLSWNGIGNEGALALGEALKLNN--VLVHLDISNNKINNEGAKRL 313



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 30/202 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++ +SG NFG+E   + AE+                            L SN  +K L
Sbjct: 183 LHTLQLSGNNFGEEAALYFAEA----------------------------LMSNYQVKKL 214

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N   ++G + L  +L  N  +E L LS   L+ +GA  ++  L+ N  L++L L+ 
Sbjct: 215 DLSHNEFHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNLSW 274

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  +L EAL  N+ +  L ++ N     GA  L +GLE N +L+ L +  N + 
Sbjct: 275 NGIGNEGALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLEVNGNLKILKMANNPLT 334

Query: 344 DEGIRALMSGLSSRKGKLAVLD 365
            EG  AL+  +S RK   ++++
Sbjct: 335 VEGATALV--VSVRKNAKSMME 354


>gi|156349338|ref|XP_001622017.1| hypothetical protein NEMVEDRAFT_v1g907 [Nematostella vectensis]
 gi|156208407|gb|EDO29917.1| predicted protein [Nematostella vectensis]
          Length = 408

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 181/344 (52%), Gaps = 17/344 (4%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVL-QSNIALK 221
            + +D+S  N G+E   ++ E+LG+ N    ++  + N I   G K     L   N  L 
Sbjct: 70  LTQLDISLNNIGEEEAKYIGEALGHENCKLTQLDISYNNIGDEGAKYIGEALGHENCKLT 129

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKN-NSILRVL 279
            L++S N IGDEG K +C+ L   N  + +L +S + + DEGAK I E L + N  L  L
Sbjct: 130 QLDISYNNIGDEGAKYICEALRHKNCKLTQLDISFIGMGDEGAKYIGEALSHENCKLTQL 189

Query: 280 ELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHL 337
           ++  N I   G   + EAL  EN  +  L++ GN G   GA  + + L   N  L +L +
Sbjct: 190 DICLNNIGVGGAKYIGEALAHENCKLTKLNITGNIGNE-GAKYIGEALRHENCKLTQLDI 248

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWINLY 395
               +GDEG + +   L     KL  L+IGNN+I  +GA ++ E +  +NCK L  +++ 
Sbjct: 249 SFIGMGDEGAKYIGEALGHENCKLTQLNIGNNNIGDEGAKYIGEALSHENCK-LTRLDIS 307

Query: 396 MNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYN 453
            N IG  GA+ I +AL  +N  +T +++ G NI ++GA  I   L  +N  +T L+++ N
Sbjct: 308 FN-IGVGGAKYIGEALAHENCKLTKLNITG-NIGNEGAKYIGEALAHENCKLTMLNISDN 365

Query: 454 PIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADML 495
            IG +GAK + E L  H N  +  L +    IG  GA+++ + L
Sbjct: 366 NIGDEGAKYIGEALS-HENCKLTQLNISNNNIGDEGAKYICEAL 408



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 211/433 (48%), Gaps = 48/433 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVL-QSNIALK 221
            + +D+S  N G+EG  ++ E+L + N    ++  + N I   G K     L   N  L 
Sbjct: 12  LTQLDISFNNIGEEGAKYIGEALAHENCKLTQLDISLNNIGEEGAKYIGEALGHENCKLT 71

Query: 222 TLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVL 279
            L++S N IG+E  K + + L  +N  + +L +S  ++ DEGAK I E L   N  L  L
Sbjct: 72  QLDISLNNIGEEEAKYIGEALGHENCKLTQLDISYNNIGDEGAKYIGEALGHENCKLTQL 131

Query: 280 ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHL 337
           +++ N I   G   + EAL  +N  +  L ++    G  GA  + + L   N  L +L +
Sbjct: 132 DISYNNIGDEGAKYICEALRHKNCKLTQLDISFIGMGDEGAKYIGEALSHENCKLTQLDI 191

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCKSLLWINLY 395
             N+IG  G + +   L+    KL  L+I  N I  +GA ++ E ++  NCK L  +++ 
Sbjct: 192 CLNNIGVGGAKYIGEALAHENCKLTKLNITGN-IGNEGAKYIGEALRHENCK-LTQLDIS 249

Query: 396 MNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYN 453
              +GDEGA+ I +AL  +N  +T +++G NNI  +GA  I   L  +N  +T LD+++N
Sbjct: 250 FIGMGDEGAKYIGEALGHENCKLTQLNIGNNNIGDEGAKYIGEALSHENCKLTRLDISFN 309

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWC-QIGASGAEFVADMLRYNNT-ISILDLRANGL 511
            IG  GAK + E L  H N    KL     IG  GA+++ + L + N  +++L++  N +
Sbjct: 310 -IGVGGAKYIGEALA-HENCKLTKLNITGNIGNEGAKYIGEALAHENCKLTMLNISDNNI 367

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            DE                                GAK + ++    N  LT ++++ N 
Sbjct: 368 GDE--------------------------------GAKYIGEALSHENCKLTQLNISNNN 395

Query: 572 IRDDGAFAIAQAL 584
           I D+GA  I +AL
Sbjct: 396 IGDEGAKYICEAL 408



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 201/383 (52%), Gaps = 25/383 (6%)

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKN-NSILRVLELNNNMIDYSGFTSLAEAL-LEN 301
           +N  + +L +S  ++ +EGAK I E L + N  L  L+++ N I   G   + EAL  EN
Sbjct: 8   ENCKLTQLDISFNNIGEEGAKYIGEALAHENCKLTQLDISLNNIGEEGAKYIGEALGHEN 67

Query: 302 STIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             +  L ++ N  G   A  + + L   N  L +L +  N+IGDEG + +   L     K
Sbjct: 68  CKLTQLDISLNNIGEEEAKYIGEALGHENCKLTQLDISYNNIGDEGAKYIGEALGHENCK 127

Query: 361 LAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTI 417
           L  LDI  N+I  +GA ++ E +  KNCK L  +++    +GDEGA+ I +AL  +N  +
Sbjct: 128 LTQLDISYNNIGDEGAKYICEALRHKNCK-LTQLDISFIGMGDEGAKYIGEALSHENCKL 186

Query: 418 TTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--IN 474
           T +D+  NNI   GA  I   L  +N  +T L++  N IG +GAK + E L+ H N  + 
Sbjct: 187 TQLDICLNNIGVGGAKYIGEALAHENCKLTKLNITGN-IGNEGAKYIGEALR-HENCKLT 244

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
            L + +  +G  GA+++ + L + N  ++ L++  N + DE      G  +   A+ S +
Sbjct: 245 QLDISFIGMGDEGAKYIGEALGHENCKLTQLNIGNNNIGDE------GAKYIGEAL-SHE 297

Query: 534 HMLFYSLCINY---LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
           +     L I++   + GAK + ++    N  LT +++  N I ++GA  I +AL A+E+ 
Sbjct: 298 NCKLTRLDISFNIGVGGAKYIGEALAHENCKLTKLNITGN-IGNEGAKYIGEAL-AHENC 355

Query: 591 AVTSLNLANNFLTKFGQSALTDA 613
            +T LN+++N +   G   + +A
Sbjct: 356 KLTMLNISDNNIGDEGAKYIGEA 378


>gi|320170242|gb|EFW47141.1| hypothetical protein CAOG_05085 [Capsaspora owczarzaki ATCC 30864]
          Length = 420

 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 136/257 (52%), Gaps = 20/257 (7%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L    IGD G K + + L  NA V  L+           + IAE LK N+ L  L    N
Sbjct: 5   LPEEEIGDAGAKAIAEALKVNATVTTLE-----------RTIAETLKVNTALTELL---N 50

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  ++AEAL  N+++ +L L  N  G  GA A+A+ L+ N ++  L+L  N IG+
Sbjct: 51  QIREGGMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGE 110

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G +A+   L   K  L+ L +G+N IS  GA  +AE +K   +L  ++L  N IG+ G 
Sbjct: 111 AGAQAIAETLKVNK-TLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGM 169

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             IA+ALK N ++T  +L  N I  +GA AIA  LK N+ +  L+LA+N IG   A+A+ 
Sbjct: 170 MAIAEALKVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQ 229

Query: 465 EV-----LKFHGNINTL 476
           +      LK +  IN L
Sbjct: 230 DARPLTELKLNYQINPL 246



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/233 (36%), Positives = 125/233 (53%), Gaps = 21/233 (9%)

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGG--------------NNIHSKGASAIARVLKDNS 443
           +IGD GA+ IA+ALK N T+TT++                 N I   G +AIA  LK N+
Sbjct: 9   EIGDAGAKAIAEALKVNATVTTLERTIAETLKVNTALTELLNQIREGGMNAIAEALKVNT 68

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +T+L L  N IG  GA+A++E LK +  +  L L   QIG +GA+ +A+ L+ N T+S 
Sbjct: 69  SVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSE 128

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
           L L  N + D   +G   ++       +L  +      I  L G   +A++ KV N +LT
Sbjct: 129 LYLGDNRISD---AGATPIAEALKVNTTLTALDLGKNQIGNL-GMMAIAEALKV-NTSLT 183

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
             +L  N+I D+GA AIA+ALK N   +V  LNLA N + K    A+ DA+ L
Sbjct: 184 EHNLNVNQIGDEGAKAIAEALKVN--TSVKKLNLAFNCIGKVAAQAIQDARPL 234



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 43/258 (16%)

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           +L   ++ D GAKAIAE LK N+ +  LE            ++AE L  N+ +  L LN 
Sbjct: 4   RLPEEEIGDAGAKAIAEALKVNATVTTLE-----------RTIAETLKVNTALTEL-LNQ 51

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
              G  G NA+A+ L+ N S+  L L  N IGD G +A                      
Sbjct: 52  IREG--GMNAIAEALKVNTSVTALGLGINQIGDAGAQA---------------------- 87

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
                  +AE +K   ++  + L  N IG+ GA+ IA+ LK N+T++ + LG N I   G
Sbjct: 88  -------IAETLKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAG 140

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A+ IA  LK N+ +T+LDL  N IG  G  A++E LK + ++    L   QIG  GA+ +
Sbjct: 141 ATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDEGAKAI 200

Query: 492 ADMLRYNNTISILDLRAN 509
           A+ L+ N ++  L+L  N
Sbjct: 201 AEALKVNTSVKKLNLAFN 218



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 94/173 (54%), Gaps = 3/173 (1%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +AE+L  N    E+    N I   G+ A    L+ N ++  L L  N IGD G + + + 
Sbjct: 35  IAETLKVNTALTEL---LNQIREGGMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAET 91

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  V RL L    + + GA+AIAE LK N  L  L L +N I  +G T +AEAL  N
Sbjct: 92  LKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVN 151

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           +T+ +L L  N  G LG  A+A+ L+ N SL E +L+ N IGDEG +A+   L
Sbjct: 152 TTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDEGAKAIAEAL 204



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 136/308 (44%), Gaps = 54/308 (17%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A+ L+ N ++  L            R +   L        +L    N I   
Sbjct: 11  GDAGAKAIAEALKVNATVTTLE-----------RTIAETLKVNTALTELL----NQIREG 55

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   +AE +K   S+  + L +N IGD GA+ IA+ LK N T+T + L  N I   GA A
Sbjct: 56  GMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQA 115

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N  ++ L L  N I   GA  ++E LK +  +  L LG  QIG  G   +A+ 
Sbjct: 116 IAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEA 175

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L+ N +++  +L  N + DE                                GAK +A++
Sbjct: 176 LKVNTSLTEHNLNVNQIGDE--------------------------------GAKAIAEA 203

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
            K VN ++  ++LAFN I   G  A AQA++    +    LN   N L    +  L  A+
Sbjct: 204 LK-VNTSVKKLNLAFNCI---GKVA-AQAIQDARPLTELKLNYQINPLAFALRPRLATAE 258

Query: 615 DL--VYEM 620
           DL  V+ M
Sbjct: 259 DLQIVFRM 266



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 90/173 (52%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G+  +AE+L  N +   +    N I  AG +A    L+ N  +  L L  N IG+ G + 
Sbjct: 56  GMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQA 115

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           + + L  N  +  L L    + D GA  IAE LK N+ L  L+L  N I   G  ++AEA
Sbjct: 116 IAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEA 175

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           L  N+++   +LN N  G  GA A+A+ L+ N S+++L+L  N IG    +A+
Sbjct: 176 LKVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAI 228



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 7/188 (3%)

Query: 154 LNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           +N  A+ L+  +SV   G      GD G   +AE+L  N T   +    N I  AG +A 
Sbjct: 57  MNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQAI 116

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L+ N  L  L L  N I D G   + + L  N  +  L L    + + G  AIAE L
Sbjct: 117 AETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEAL 176

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           K N+ L    LN N I   G  ++AEAL  N++++ L+L  N  G + A A    ++  +
Sbjct: 177 KVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQA----IQDAR 232

Query: 331 SLRELHLH 338
            L EL L+
Sbjct: 233 PLTELKLN 240



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 4/159 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     G+ G   +AE+L  N+T  E+    N I+ AG     
Sbjct: 86  QAIAETLKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIA 145

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L+L  N IG+ G+  + + L  N  +    L+   + DEGAKAIAE LK
Sbjct: 146 EALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDEGAKAIAEALK 205

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
            N+ ++ L L  N I        A+A+ +   +  L LN
Sbjct: 206 VNTSVKKLNLAFNCIGKVA----AQAIQDARPLTELKLN 240


>gi|31981748|ref|NP_660117.2| ribonuclease inhibitor isoform a [Mus musculus]
 gi|285402638|ref|NP_001165571.1| ribonuclease inhibitor isoform a [Mus musculus]
 gi|78099143|sp|Q91VI7.1|RINI_MOUSE RecName: Full=Ribonuclease inhibitor; AltName:
           Full=Ribonuclease/angiogenin inhibitor 1
 gi|16307569|gb|AAH10331.1| Ribonuclease/angiogenin inhibitor 1 [Mus musculus]
 gi|74151027|dbj|BAE27643.1| unnamed protein product [Mus musculus]
 gi|74194220|dbj|BAE24659.1| unnamed protein product [Mus musculus]
 gi|74228742|dbj|BAE21862.1| unnamed protein product [Mus musculus]
 gi|148686056|gb|EDL18003.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Mus musculus]
 gi|148686057|gb|EDL18004.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Mus musculus]
 gi|148686058|gb|EDL18005.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Mus musculus]
          Length = 456

 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 183/388 (47%), Gaps = 17/388 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 52  ALTELSLRTNELGDGGVGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 111 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 171 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++ L+    + ++ +   ++ +        VL  +  +  L ++ NP+G 
Sbjct: 291 LKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N      C
Sbjct: 351 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNN------C 404

Query: 517 SGCNG----LSFFHSAIYSLKHMLFYSL 540
            G  G    L        +L+ ++ Y +
Sbjct: 405 MGGPGVLQLLESLKQPSCTLQQLVLYDI 432



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 105 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 165 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  +R+L L      A G   L + L   +SL+EL
Sbjct: 225 QELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 285 SLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMS 344

Query: 396 MNDIGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 345 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 404

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 405 MGGPGVLQLLESLK 418



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 183/425 (43%), Gaps = 13/425 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 2   SLDIQCEQLSD---ARWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 58

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 59  RTNELGDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 118

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 119 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 179 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 238

Query: 404 AEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +    L  +  + T+ L   +I ++G   + RVL+    +  L LA N +  +GA+ 
Sbjct: 239 IAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARL 298

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCN 520
           L E L   G  + +L +  C + A+   +   +L  + ++  L + +N L DE V   C 
Sbjct: 299 LCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCK 358

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
            LS   + +      L+   C     G   LA    + N +L  +DL+ N +   G   +
Sbjct: 359 ALSQPDTVLRE----LWLGDCDVTNSGCSSLANVL-LANRSLRELDLSNNCMGGPGVLQL 413

Query: 581 AQALK 585
            ++LK
Sbjct: 414 LESLK 418


>gi|156355179|ref|XP_001623550.1| predicted protein [Nematostella vectensis]
 gi|156210262|gb|EDO31450.1| predicted protein [Nematostella vectensis]
          Length = 348

 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 161/328 (49%), Gaps = 15/328 (4%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L +NQ  +E+    N I   G  A    L++   L+ L+L  N IGD+G   +   L
Sbjct: 32  AEMLSHNQVLKELCLEGN-IEVEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASAL 90

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
             N+ +E L L   ++ DEGA A+A  LK NS L  L L  N I     +S+ + L  N+
Sbjct: 91  KTNSTLENLDLRCNNIGDEGAIAMANALKTNSTLENLNLQENNIGDEVLSSIIKTLKTNT 150

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELH---LHGNSIGDEGIRALMSGLSSRKG 359
           +I + +L+        +  LA  L  NK++  L    LHG SI      A ++    +  
Sbjct: 151 SITTFNLD--LQSKTSSADLADLLSENKTIEHLRIYDLHG-SI------AAIASTQMKNP 201

Query: 360 KLAVLDIG-NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            L  L I   N +S++ A   AE + + + L  + L  N I  EGA  IA ALK    + 
Sbjct: 202 SLKALRIRCPNEVSSEDAAAFAEMLSHNQVLRKLRLEGN-IEVEGAIAIASALKTKSVLR 260

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            + L  NNI  KGA AIA  LK NS +  LDL  N IG +GA A++  LK +  +  L L
Sbjct: 261 KLSLYSNNIGDKGAIAIASALKTNSTLEKLDLRCNNIGDEGAIAMANALKTNSTLENLNL 320

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDL 506
               IG  G   +A+ L+ N+T+  LDL
Sbjct: 321 QGNNIGDEGTISMANALKTNSTLRSLDL 348



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 157/326 (48%), Gaps = 34/326 (10%)

Query: 217 NIALKTLNL-SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           N +LK L +   N +  E      ++L  N  ++ L L   ++  EGA AIA  LK  S+
Sbjct: 9   NPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLKELCLEG-NIEVEGAIAIASALKTKSV 67

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           LR L L +N I   G  ++A AL  NST+ +L L  N  G  GA A+A  L+ N +L  L
Sbjct: 68  LRKLSLYSNNIGDKGAIAIASALKTNSTLENLDLRCNNIGDEGAIAMANALKTNSTLENL 127

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           +L  N+IGDE + +++  L +        LD+ + + SA     +A+ +   K++  + +
Sbjct: 128 NLQENNIGDEVLSSIIKTLKTNTSITTFNLDLQSKTSSA----DLADLLSENKTIEHLRI 183

Query: 395 Y--------------------------MNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           Y                           N++  E A   A+ L  N+ +  + L GN I 
Sbjct: 184 YDLHGSIAAIASTQMKNPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLRKLRLEGN-IE 242

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            +GA AIA  LK  SV+  L L  N IG  GA A++  LK +  +  L L    IG  GA
Sbjct: 243 VEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASALKTNSTLEKLDLRCNNIGDEGA 302

Query: 489 EFVADMLRYNNTISILDLRANGLRDE 514
             +A+ L+ N+T+  L+L+ N + DE
Sbjct: 303 IAMANALKTNSTLENLNLQGNNIGDE 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 171/349 (48%), Gaps = 41/349 (11%)

Query: 293 SLAEALLENSTIRSLHLN-GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           ++A   ++N ++++L +   N   +  A A A+ L  N+ L+EL L GN I  EG  A+ 
Sbjct: 1   AIASTQMKNPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLKELCLEGN-IEVEGAIAIA 59

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
           S L + K  L  L + +N+I  KGA  +A  +K   +L  ++L  N+IGDEGA  +A+AL
Sbjct: 60  SALKT-KSVLRKLSLYSNNIGDKGAIAIASALKTNSTLENLDLRCNNIGDEGAIAMANAL 118

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS--LDLAYNPIGADGAKALSE---- 465
           K N T+  ++L  NNI  +  S+I + LK N+ IT+  LDL      AD A  LSE    
Sbjct: 119 KTNSTLENLNLQENNIGDEVLSSIIKTLKTNTSITTFNLDLQSKTSSADLADLLSENKTI 178

Query: 466 ----VLKFHGNINTLKLGW------------C--QIGASGAEFVADMLRYNNTISILDLR 507
               +   HG+I  +                C  ++ +  A   A+ML +N  +  L L 
Sbjct: 179 EHLRIYDLHGSIAAIASTQMKNPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLRKLRLE 238

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYS---LKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
            N    EV     G     SA+ +   L+ +  YS  I   +GA  +A + K  N  L  
Sbjct: 239 GNI---EV----EGAIAIASALKTKSVLRKLSLYSNNIGD-KGAIAIASALKT-NSTLEK 289

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +DL  N I D+GA A+A ALK N    + +LNL  N +   G  ++ +A
Sbjct: 290 LDLRCNNIGDEGAIAMANALKTNS--TLENLNLQGNNIGDEGTISMANA 336


>gi|389594235|ref|XP_003722364.1| ribonuclease inhibitor-like protein [Leishmania major strain
           Friedlin]
 gi|321438862|emb|CBZ12622.1| ribonuclease inhibitor-like protein [Leishmania major strain
           Friedlin]
          Length = 738

 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 191/400 (47%), Gaps = 49/400 (12%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N  G    + L  +L  N+    L LS   LRD+GA+ IA L+K N  L  +++ +N
Sbjct: 153 LPENGFGVCSAEALAAVLSRNSHYSVLDLSGNRLRDDGARFIAHLIKRNRTLVHIDVASN 212

Query: 285 MIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLH 338
            I + G   +A ALLEN+T+ SL +      NGN+ G  GA A+ + L  N+ L  L++ 
Sbjct: 213 DIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRSNEVLARLNVS 272

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G  G+  + S L  R   L  L++ +N++  +GA  +A  ++      W  L  N 
Sbjct: 273 SNGLGAGGVAFIASAL-ERNSSLTRLNLSSNNLGLEGARVLASALEAAHVTHW-ELQRNH 330

Query: 399 IGDEGA----EKIADALKQNRTITT-IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           + D+G       +A A++    +   +DL  N +    A A+ +VL  +  +T+L L+ N
Sbjct: 331 LDDKGGACFLNALAGAIRNGYDVVEYLDLDNNALGEGSAEAVGKVLAVSGSLTTLRLSGN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+GA G KA+S  L  + ++++L L  C I   GA  +  +L  N+T+  LD+  N ++D
Sbjct: 391 PLGA-GVKAISTGLNENHSLSSLHLSMCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKD 449

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA  LA+    VN+ LTS +L+ N I 
Sbjct: 450 --------------------------------GGAVELAKGL-AVNKCLTSWNLSSNRIG 476

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             G   +A+A++ N    +  LNL  N + +    A++D+
Sbjct: 477 HAGGLEMAKAVQKNR--TLRHLNLRRNLMLEATGEAISDS 514



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 8/290 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G + G  G   + E L  N+    ++ ++NG+ A G+      L+ N +L  LNLS N
Sbjct: 243 VNGNHIGTPGAEAIGEVLRSNEVLARLNVSSNGLGAGGVAFIASALERNSSLTRLNLSSN 302

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA----KAIAELLKNN-SILRVLELNN 283
            +G EG + L   L + A V   +L    L D+G      A+A  ++N   ++  L+L+N
Sbjct: 303 NLGLEGARVLASAL-EAAHVTHWELQRNHLDDKGGACFLNALAGAIRNGYDVVEYLDLDN 361

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +      ++ + L  + ++ +L L+GN  GA G  A++ GL  N SL  LHL   SI 
Sbjct: 362 NALGEGSAEAVGKVLAVSGSLTTLRLSGNPLGA-GVKAISTGLNENHSLSSLHLSMCSID 420

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G  AL + L      L  LD+ NN +   GA  +A+ +   K L   NL  N IG  G
Sbjct: 421 HIGAAALGAVLCVNH-TLRHLDMSNNRVKDGGAVELAKGLAVNKCLTSWNLSSNRIGHAG 479

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             ++A A+++NRT+  ++L  N +      AI+   + N+ +  LD+AYN
Sbjct: 480 GLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRANNTLERLDVAYN 529


>gi|405944805|pdb|3TSR|E Chain E, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
           With Mouse Ribonuclease 1
 gi|405944806|pdb|3TSR|F Chain F, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
           With Mouse Ribonuclease 1
 gi|405944807|pdb|3TSR|G Chain G, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
           With Mouse Ribonuclease 1
 gi|405944808|pdb|3TSR|H Chain H, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
           With Mouse Ribonuclease 1
          Length = 457

 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 183/388 (47%), Gaps = 17/388 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 53  ALTELSLRTNELGDGGVGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 111

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 112 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 171

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 172 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 231

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 232 SNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNE 291

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++ L+    + ++ +   ++ +        VL  +  +  L ++ NP+G 
Sbjct: 292 LKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGD 351

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N      C
Sbjct: 352 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNN------C 405

Query: 517 SGCNG----LSFFHSAIYSLKHMLFYSL 540
            G  G    L        +L+ ++ Y +
Sbjct: 406 MGGPGVLQLLESLKQPSCTLQQLVLYDI 433



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 106 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 165

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 166 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 225

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  +R+L L      A G   L + L   +SL+EL
Sbjct: 226 QELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKEL 285

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 286 SLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMS 345

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 346 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 405

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 406 MGGPGVLQLLESLK 419



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 183/425 (43%), Gaps = 13/425 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 3   SLDIQCEQLSD---ARWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 59

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 60  RTNELGDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 119

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 120 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 179

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 180 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 239

Query: 404 AEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +    L  +  + T+ L   +I ++G   + RVL+    +  L LA N +  +GA+ 
Sbjct: 240 IAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARL 299

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCN 520
           L E L   G  + +L +  C + A+   +   +L  + ++  L + +N L DE V   C 
Sbjct: 300 LCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCK 359

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
            LS   + +      L+   C     G   LA    + N +L  +DL+ N +   G   +
Sbjct: 360 ALSQPDTVLRE----LWLGDCDVTNSGCSSLANVL-LANRSLRELDLSNNCMGGPGVLQL 414

Query: 581 AQALK 585
            ++LK
Sbjct: 415 LESLK 419


>gi|354495357|ref|XP_003509797.1| PREDICTED: ribonuclease inhibitor-like [Cricetulus griseus]
 gi|344249425|gb|EGW05529.1| Ribonuclease inhibitor [Cricetulus griseus]
          Length = 456

 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 175/357 (49%), Gaps = 7/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
             + + +     GD G+  + + L  N T   +++S     +T AG +    VL+S   L
Sbjct: 52  TLTELSLCTNELGDPGVCLVLQGL-QNPTCKIQKLSLQNCSLTEAGCRVLPDVLRSLPTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+LS NP+GD G+K LC+ L+D    +E+LQL   +L     + +A + +     + +
Sbjct: 111 RELHLSDNPLGDAGLKLLCEGLLDPQCRLEKLQLEYCNLTATSCEPLASVFRVKPNFKEI 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +  +G   L + L +++  + SL L      +     L   +    SL++L L 
Sbjct: 171 VLSNNDLHEAGVQMLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQQLDLG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     ++  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNAGIAALCSGLLLPSCRIRTLWLWECDITAEGCKDLCRVLRTKQSLKELSLAGNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +   S I  VL  N  +  L ++ NP+G 
Sbjct: 291 LRDEGAQLLCESLLEPGCQLESLWIKTCSLTAACCSHICSVLTKNRSLLELQMSSNPLGD 350

Query: 458 DGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            G   L + L +    +  L LG C +  +G   +A +L +N ++  LDL  N + D
Sbjct: 351 LGVLELCKALGQPDTVLRVLWLGDCDVTDNGCSSLATVLLHNRSLRELDLSNNCMGD 407



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 4/321 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAF 210
           + L +  + L     + +S    GD GL  L E L   Q   E++      +TA   +  
Sbjct: 98  RVLPDVLRSLPTLRELHLSDNPLGDAGLKLLCEGLLDPQCRLEKLQLEYCNLTATSCEPL 157

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAEL 269
             V +     K + LS N + + GV+ LC  L D+A  +E L+L +  +     K + ++
Sbjct: 158 ASVFRVKPNFKEIVLSNNDLHEAGVQMLCQGLKDSACQLESLKLENCGITSANCKDLCDV 217

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEG 328
           + + + L+ L+L +N +  +G  +L   LL  S  IR+L L      A G   L + L  
Sbjct: 218 VASKASLQQLDLGSNKLGNAGIAALCSGLLLPSCRIRTLWLWECDITAEGCKDLCRVLRT 277

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            +SL+EL L GN + DEG + L   L     +L  L I   S++A    H+   +   +S
Sbjct: 278 KQSLKELSLAGNELRDEGAQLLCESLLEPGCQLESLWIKTCSLTAACCSHICSVLTKNRS 337

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITS 447
           LL + +  N +GD G  ++  AL Q  T+   + LG  ++   G S++A VL  N  +  
Sbjct: 338 LLELQMSSNPLGDLGVLELCKALGQPDTVLRVLWLGDCDVTDNGCSSLATVLLHNRSLRE 397

Query: 448 LDLAYNPIGADGAKALSEVLK 468
           LDL+ N +G  G   L E ++
Sbjct: 398 LDLSNNCMGDSGVLRLVESVR 418



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 193/447 (43%), Gaps = 20/447 (4%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  + V     G+T    K     +QSN  L  L+L
Sbjct: 2   SLDIQCEQLSD---ARWTELLPLIQQYQVVRLDDCGLTEVRCKDISSAIQSNPTLTELSL 58

Query: 226 SGNPIGDEGVKCLCDILV----DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             N +GD GV   C +L         +++L L +  L + G + + ++L++   LR L L
Sbjct: 59  CTNELGDPGV---CLVLQGLQNPTCKIQKLSLQNCSLTEAGCRVLPDVLRSLPTLRELHL 115

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           ++N +  +G   L E LL+    +  L L      A     LA       + +E+ L  N
Sbjct: 116 SDNPLGDAGLKLLCEGLLDPQCRLEKLQLEYCNLTATSCEPLASVFRVKPNFKEIVLSNN 175

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            + + G++ L  GL     +L  L + N  I++     + + + +  SL  ++L  N +G
Sbjct: 176 DLHEAGVQMLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQQLDLGSNKLG 235

Query: 401 DEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           + G   +    L  +  I T+ L   +I ++G   + RVL+    +  L LA N +  +G
Sbjct: 236 NAGIAALCSGLLLPSCRIRTLWLWECDITAEGCKDLCRVLRTKQSLKELSLAGNELRDEG 295

Query: 460 AKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCS 517
           A+ L E L   G  + +L +  C + A+    +  +L  N ++  L + +N L D  V  
Sbjct: 296 AQLLCESLLEPGCQLESLWIKTCSLTAACCSHICSVLTKNRSLLELQMSSNPLGDLGVLE 355

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
            C  L    + +     +L+   C     G   LA +  + N +L  +DL+ N + D G 
Sbjct: 356 LCKALGQPDTVL----RVLWLGDCDVTDNGCSSLA-TVLLHNRSLRELDLSNNCMGDSGV 410

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTK 604
             + ++++     A+  L L + + T+
Sbjct: 411 LRLVESVR-QPSCALQQLVLYDIYWTE 436



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 3/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +  + G+  L + L  +    E +     GIT+A  K    V+ S  +L+ 
Sbjct: 167 FKEIVLSNNDLHEAGVQMLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQQ 226

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+L  N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+    L+ L L
Sbjct: 227 LDLGSNKLGNAGIAALCSGLLLPSCRIRTLWLWECDITAEGCKDLCRVLRTKQSLKELSL 286

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N +   G   L E+LLE    + SL +      A   + +   L  N+SL EL +  N
Sbjct: 287 AGNELRDEGAQLLCESLLEPGCQLESLWIKTCSLTAACCSHICSVLTKNRSLLELQMSSN 346

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD G+  L   L      L VL +G+  ++  G   +A  + + +SL  ++L  N +G
Sbjct: 347 PLGDLGVLELCKALGQPDTVLRVLWLGDCDVTDNGCSSLATVLLHNRSLRELDLSNNCMG 406

Query: 401 DEGAEKIADALKQ 413
           D G  ++ ++++Q
Sbjct: 407 DSGVLRLVESVRQ 419



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 167/390 (42%), Gaps = 30/390 (7%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST--IRSLH 308
           ++L    L +   K I+  +++N  L  L L  N +   G   + + L +N T  I+ L 
Sbjct: 28  VRLDDCGLTEVRCKDISSAIQSNPTLTELSLCTNELGDPGVCLVLQGL-QNPTCKIQKLS 86

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L        G   L   L    +LRELHL  N +GD G++ L  GL   + +L  L +  
Sbjct: 87  LQNCSLTEAGCRVLPDVLRSLPTLRELHLSDNPLGDAGLKLLCEGLLDPQCRLEKLQLEY 146

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNI 427
            +++A     +A   +   +   I L  ND+ + G + +   LK +   + ++ L    I
Sbjct: 147 CNLTATSCEPLASVFRVKPNFKEIVLSNNDLHEAGVQMLCQGLKDSACQLESLKLENCGI 206

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL-SEVLKFHGNINTLKLGWCQIGAS 486
            S     +  V+   + +  LDL  N +G  G  AL S +L     I TL L  C I A 
Sbjct: 207 TSANCKDLCDVVASKASLQQLDLGSNKLGNAGIAALCSGLLLPSCRIRTLWLWECDITAE 266

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDE----VCS-----GCNGLSFFHSAIYSLKHMLF 537
           G + +  +LR   ++  L L  N LRDE    +C      GC   S +      +K    
Sbjct: 267 GCKDLCRVLRTKQSLKELSLAGNELRDEGAQLLCESLLEPGCQLESLW------IKTCSL 320

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
            + C +++        S    N +L  + ++ N + D G   + +AL    D  +  L L
Sbjct: 321 TAACCSHI-------CSVLTKNRSLLELQMSSNPLGDLGVLELCKAL-GQPDTVLRVLWL 372

Query: 598 ANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
            +  +T  G S+L  A  L++  S +E+++
Sbjct: 373 GDCDVTDNGCSSL--ATVLLHNRSLRELDL 400



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 12/156 (7%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           +KQ+L E +          ++G    DEG   L ESL       E +      +TAA   
Sbjct: 277 TKQSLKELS----------LAGNELRDEGAQLLCESLLEPGCQLESLWIKTCSLTAACCS 326

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIA 267
               VL  N +L  L +S NP+GD GV  LC  L     V R L L   D+ D G  ++A
Sbjct: 327 HICSVLTKNRSLLELQMSSNPLGDLGVLELCKALGQPDTVLRVLWLGDCDVTDNGCSSLA 386

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
            +L +N  LR L+L+NN +  SG   L E++ + S 
Sbjct: 387 TVLLHNRSLRELDLSNNCMGDSGVLRLVESVRQPSC 422


>gi|320165118|gb|EFW42017.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 263

 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 108/189 (57%), Gaps = 1/189 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           A+A+ L+ N SLR L L  N IGD G +A+   L      L  L +G N I   GA  +A
Sbjct: 33  AIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNT-TLTELGLGQNQIGDAGAHAIA 91

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E +K+   L  ++L  N IGD GA+ IA+AL+ N T+T +  G N++   GA AIA   K
Sbjct: 92  ETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEAFK 151

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +T L L+ N IG  GA+A++E LK +  +N L L   QIG +GA  +A++L+ N  
Sbjct: 152 VNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLFLHQNQIGDAGARAIAEVLKVNKK 211

Query: 501 ISILDLRAN 509
           +  L L  N
Sbjct: 212 LRYLYLSNN 220



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 124/242 (51%), Gaps = 35/242 (14%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K   SL  ++L  N IGD GA+ IA+ALK N T+T + LG N I   GA AIA  
Sbjct: 34  IAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLGQNQIGDAGAHAIAET 93

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N+++  L L  N IG  GA+A++E L+ +  +  L  G   +G  GA+ +A+  + N
Sbjct: 94  LKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEAFKVN 153

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            T++ L L  N + D                                 GA+ +A++ KV 
Sbjct: 154 TTMTGLGLSENAIGDA--------------------------------GAQAVAEALKV- 180

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 618
           N AL  + L  N+I D GA AIA+ LK N+ +    L L+NNF+T  G +AL    + + 
Sbjct: 181 NTALNWLFLHQNQIGDAGARAIAEVLKVNKKLRY--LYLSNNFITNVGITALRQTGNTIC 238

Query: 619 EM 620
           ++
Sbjct: 239 QL 240



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 117/217 (53%), Gaps = 1/217 (0%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L+L   ++R++  +AIAE LK N+ LR L+L  N I  +G  ++AEAL  N+T+  L L
Sbjct: 18  KLELIRQNIREDDVQAIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGL 77

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N  G  GA+A+A+ L+ N  L +L L  N IGD G +A+   L      L  L  G N
Sbjct: 78  GQNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNT-TLTELGFGCN 136

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +   GA  +AE  K   ++  + L  N IGD GA+ +A+ALK N  +  + L  N I  
Sbjct: 137 HVGDPGAKAIAEAFKVNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLFLHQNQIGD 196

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
            GA AIA VLK N  +  L L+ N I   G  AL + 
Sbjct: 197 AGARAIAEVLKVNKKLRYLYLSNNFITNVGITALRQT 233



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 102/199 (51%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K   +  ++D+     GD G   +AE+L  N T  E+    N I  AG  A  
Sbjct: 32  QAIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLGQNQIGDAGAHAIA 91

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+SN  L  L+L  N IGD G + + + L  N  +  L      + D GAKAIAE  K
Sbjct: 92  ETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEAFK 151

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ +  L L+ N I  +G  ++AEAL  N+ +  L L+ N  G  GA A+A+ L+ NK 
Sbjct: 152 VNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLFLHQNQIGDAGARAIAEVLKVNKK 211

Query: 332 LRELHLHGNSIGDEGIRAL 350
           LR L+L  N I + GI AL
Sbjct: 212 LRYLYLSNNFITNVGITAL 230



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 1/219 (0%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           + K   A   +++  +N  ++ +  +AE+L  N +   +    N I  AG +A    L+ 
Sbjct: 9   YDKVKHASGKLELIRQNIREDDVQAIAEALKANTSLRALDLRENQIGDAGAQAIAEALKL 68

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L L  N IGD G   + + L  N  + +L L    + D GA+AIAE L+ N+ L
Sbjct: 69  NTTLTELGLGQNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTL 128

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L    N +   G  ++AEA   N+T+  L L+ N  G  GA A+A+ L+ N +L  L 
Sbjct: 129 TELGFGCNHVGDPGAKAIAEAFKVNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLF 188

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           LH N IGD G RA+   L   K KL  L + NN I+  G
Sbjct: 189 LHQNQIGDAGARAIAEVLKVNK-KLRYLYLSNNFITNVG 226



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 1/180 (0%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           +L L   +I ++ ++A+   L +    L  LD+  N I   GA  +AE +K   +L  + 
Sbjct: 18  KLELIRQNIREDDVQAIAEALKANT-SLRALDLRENQIGDAGAQAIAEALKLNTTLTELG 76

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD GA  IA+ LK N  +  + L  N I   GA AIA  L+ N+ +T L    N
Sbjct: 77  LGQNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCN 136

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +G  GAKA++E  K +  +  L L    IG +GA+ VA+ L+ N  ++ L L  N + D
Sbjct: 137 HVGDPGAKAIAEAFKVNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLFLHQNQIGD 196


>gi|123448264|ref|XP_001312864.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121894726|gb|EAX99934.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 729

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 185/390 (47%), Gaps = 26/390 (6%)

Query: 142 FTGKLFR-----ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
           FT KLF+     +SK+T  +           +M   + G      +A+++      + V 
Sbjct: 50  FTEKLFQRFVNNQSKKTFKKI---------FEMESCSLGPLAACAVADTVYKYNNIKVVC 100

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS- 255
            + N I   G  AF  +LQS   + ++++S N IGD G   +   L +N  V +L++ S 
Sbjct: 101 ISGNNIGDKGAAAFSTLLQSTSRIISVDISSNSIGDLGCSLIFKALKENKSVIQLKIGSS 160

Query: 256 --VDLRDEGAKAI---AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
             V     G K+I   AE+   N +L  ++L+   I      ++++ L EN TI+ ++L 
Sbjct: 161 SGVARNTLGVKSIQQMAEMFSENKVLSEIDLSMTEITADTIQAISKGLKENKTIQVINLQ 220

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N     GA+ L + L  N  +REL+   N IGD   +   +   + K  L  L+I  NS
Sbjct: 221 NNNMQTKGASYLLRAL-VNSQIRELNFSNNHIGDVASKEFANFFQTNKS-LNTLNISGNS 278

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
            +AK    +AE +    S+  +NL  N+IG +G   +      N T+  +++    I + 
Sbjct: 279 FTAKFTGAIAEALGANTSIRELNLSKNNIGGQGIAALGPVFTTNETLHHLNVSFCKIDAA 338

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G    A  LK N  +  L+L +NP+   GA  L++++K H ++  + L  C+I  SG++ 
Sbjct: 339 GFETFAINLKQNKTLQCLNLGHNPLRDAGATKLADIIKVHPSLRDIDLELCEINDSGSDN 398

Query: 491 VADML---RYNNTISIL-DLRANGLRDEVC 516
           +   L   +  +T+SI  +L  NG+  + C
Sbjct: 399 LFKALTQSKIVDTVSIKNNLIKNGIPIQTC 428



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 43/356 (12%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +S  ++ D+GA A + LL++ S +  +++++N I   G + + +AL EN ++  L +  +
Sbjct: 101 ISGNNIGDKGAAAFSTLLQSTSRIISVDISSNSIGDLGCSLIFKALKENKSVIQLKIGSS 160

Query: 313 YG------GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
            G      G      +A+    NK L E+ L    I  + I+A+  GL   K  + V+++
Sbjct: 161 SGVARNTLGVKSIQQMAEMFSENKVLSEIDLSMTEITADTIQAISKGLKENKT-IQVINL 219

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
            NN++  KGA ++   + N + +  +N   N IGD  +++ A+  + N+++ T+++ GN+
Sbjct: 220 QNNNMQTKGASYLLRALVNSQ-IRELNFSNNHIGDVASKEFANFFQTNKSLNTLNISGNS 278

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
             +K   AIA  L  N+ I  L+L+ N IG  G  AL  V   +  ++ L + +C+I A+
Sbjct: 279 FTAKFTGAIAEALGANTSIRELNLSKNNIGGQGIAALGPVFTTNETLHHLNVSFCKIDAA 338

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ 546
           G E  A  L+ N T+  L+L  N LRD                                 
Sbjct: 339 GFETFAINLKQNKTLQCLNLGHNPLRD--------------------------------A 366

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
           GA  LA   K V+ +L  IDL   EI D G+  + +AL  ++   V ++++ NN +
Sbjct: 367 GATKLADIIK-VHPSLRDIDLELCEINDSGSDNLFKALTQSK--IVDTVSIKNNLI 419



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 4/248 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q +++  KE +    +++   N   +G  +L  +L  N    E++F+ N I     K F 
Sbjct: 202 QAISKGLKENKTIQVINLQNNNMQTKGASYLLRAL-VNSQIRELNFSNNHIGDVASKEFA 260

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              Q+N +L TLN+SGN    +    + + L  N  +  L LS  ++  +G  A+  +  
Sbjct: 261 NFFQTNKSLNTLNISGNSFTAKFTGAIAEALGANTSIRELNLSKNNIGGQGIAALGPVFT 320

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L ++   ID +GF + A  L +N T++ L+L  N     GA  LA  ++ + S
Sbjct: 321 TNETLHHLNVSFCKIDAAGFETFAINLKQNKTLQCLNLGHNPLRDAGATKLADIIKVHPS 380

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           LR++ L    I D G   L   L+  K  +  + I NN I  K    +   +     +L 
Sbjct: 381 LRDIDLELCEINDSGSDNLFKALTQSKI-VDTVSIKNNLI--KNGIPIQTCVNENTHILN 437

Query: 392 INLYMNDI 399
           +N+  NDI
Sbjct: 438 LNIEFNDI 445


>gi|146093389|ref|XP_001466806.1| ribonuclease inhibitor-like protein [Leishmania infantum JPCM5]
 gi|134071169|emb|CAM69855.1| ribonuclease inhibitor-like protein [Leishmania infantum JPCM5]
          Length = 736

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 192/400 (48%), Gaps = 49/400 (12%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N  G    + L  +L  N+    L LS   LRD+GA+ IA+L+K N  L  +++ +N
Sbjct: 150 LPENGFGVCSAEALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASN 209

Query: 285 MIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLH 338
            I + G   +A ALLEN+T+ SL +      NGN+ G  GA A+ + L  N+ L  L++ 
Sbjct: 210 DIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVS 269

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G  G+  + S L  R G L  L++ +N++  +GA  +A  ++      W  L  N 
Sbjct: 270 SNGLGAGGVAFIASAL-ERNGSLTRLNLSSNNLGLEGARVLASALEAAHVTHW-ELQRNH 327

Query: 399 IGDEGA----EKIADALKQNRTITT-IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           + D+G       +A A++    +   +DL  N +    A A  +VL  ++ +T+L L  N
Sbjct: 328 LDDKGGACFLNALAGAIRNGHDVVEYLDLDNNALGEGCADAAGKVLAVSASLTTLRLCGN 387

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+GA G KA+S  L  + ++N+L L  C I   GA  +  +L  N+T+  LD+  N ++D
Sbjct: 388 PLGA-GVKAISTGLNENHSLNSLYLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKD 446

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA  LA+    VN+ LT+ +L+ N I 
Sbjct: 447 --------------------------------GGAVELAKGL-AVNKCLTTWNLSSNRIG 473

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             G   +A+A++ N    +  LNL  N + +    A++D+
Sbjct: 474 HAGGLEMAKAVQKNR--TLRHLNLRRNLMLEATGEAISDS 511



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 151/305 (49%), Gaps = 8/305 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G + G  G   + E L  N+    ++ ++NG+ A G+      L+ N +L  LNLS N
Sbjct: 240 VNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNGLGAGGVAFIASALERNGSLTRLNLSSN 299

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA----KAIAELLKN-NSILRVLELNN 283
            +G EG + L   L + A V   +L    L D+G      A+A  ++N + ++  L+L+N
Sbjct: 300 NLGLEGARVLASAL-EAAHVTHWELQRNHLDDKGGACFLNALAGAIRNGHDVVEYLDLDN 358

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +      +  + L  ++++ +L L GN  GA G  A++ GL  N SL  L+L   SI 
Sbjct: 359 NALGEGCADAAGKVLAVSASLTTLRLCGNPLGA-GVKAISTGLNENHSLNSLYLSKCSID 417

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G  AL + L      L  LD+ NN +   GA  +A+ +   K L   NL  N IG  G
Sbjct: 418 HIGAAALGAVLCVNH-TLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAG 476

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             ++A A+++NRT+  ++L  N +      AI+   + N+ +  LD+AYN      A ++
Sbjct: 477 GLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRSNNTLERLDVAYNDFSYACAMSI 536

Query: 464 SEVLK 468
              L+
Sbjct: 537 ERALE 541



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 158/375 (42%), Gaps = 66/375 (17%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           NG      +A   VL  N     L+LSGN + D+G + +  ++  N  +  + ++S D+ 
Sbjct: 153 NGFGVCSAEALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASNDIG 212

Query: 260 DEGAKAIAE-LLKNNSILRV-----LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
             G   IA  LL+NN+++ +       +N N I   G  ++ E L  N  +  L+++ N 
Sbjct: 213 HVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNG 272

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS----------------- 356
            GA G   +A  LE N SL  L+L  N++G EG R L S L +                 
Sbjct: 273 LGAGGVAFIASALERNGSLTRLNLSSNNLGLEGARVLASALEAAHVTHWELQRNHLDDKG 332

Query: 357 ------------RKGKLAV--LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
                       R G   V  LD+ NN++    A    + +    SL  + L  N +G  
Sbjct: 333 GACFLNALAGAIRNGHDVVEYLDLDNNALGEGCADAAGKVLAVSASLTTLRLCGNPLG-A 391

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G + I+  L +N ++ ++ L   +I   GA+A+  VL  N  +  LD++ N +   GA  
Sbjct: 392 GVKAISTGLNENHSLNSLYLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKDGGAVE 451

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGA----------------------------EFVADM 494
           L++ L  +  + T  L   +IG +G                             E ++D 
Sbjct: 452 LAKGLAVNKCLTTWNLSSNRIGHAGGLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDS 511

Query: 495 LRYNNTISILDLRAN 509
            R NNT+  LD+  N
Sbjct: 512 FRSNNTLERLDVAYN 526


>gi|440909575|gb|ELR59470.1| NACHT, LRR and PYD domains-containing protein 5, partial [Bos
            grunniens mutus]
          Length = 1162

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 160/347 (46%), Gaps = 5/347 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  + +D++G    +E +    E+L + Q A E+     G+T A  +    VL ++ +LK
Sbjct: 803  RNITRLDLTGCRLREEDVRTACEALRHPQCALELDRC--GLTPASCREISQVLATSGSLK 860

Query: 222  TLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            +L+L+GN + D+GVK LCD L V    +++L L S  L     + +A  L  N  L  L 
Sbjct: 861  SLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLASALIENQGLTHLS 920

Query: 281  LNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ + +   G + L  A+ L +  ++ L LN       G   LA  L GN+ L  L L  
Sbjct: 921  LSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALMGNRHLTHLSLSM 980

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N + D G+  L   +      L  LD+ N  ++A     ++  I     L  ++L  N +
Sbjct: 981  NPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVITRSPRLRSLDLAANAL 1040

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            GDEG   + + LKQ  T+T + L    + S+G  A++  L  +  + SL+L  N +G  G
Sbjct: 1041 GDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRHLASLNLMRNDLGPRG 1100

Query: 460  AKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
               L S  +    N+ T+ L   Q  A     +  + R    + I D
Sbjct: 1101 MTTLCSAFMHPTSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVVISD 1147



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 162/372 (43%), Gaps = 17/372 (4%)

Query: 152  QTLNEFAKELRAFSS-------VDMSGRNFGDEGLFFLAESLGYNQTAEEVS---FAANG 201
            +TL+E  ++L +  S       +D+SG     E +  L   L   Q A ++    F    
Sbjct: 730  KTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKL--RQPACKIQNLIFKGAR 787

Query: 202  ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
            +T  G++     L  N  +  L+L+G  + +E V+  C+ L        L+L    L   
Sbjct: 788  VTP-GLRHLWMTLIINRNITRLDLTGCRLREEDVRTACEALRHPQCA--LELDRCGLTPA 844

Query: 262  GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGAN 320
              + I+++L  +  L+ L L  N +   G  SL +AL +   T++ L L      A    
Sbjct: 845  SCREISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQ 904

Query: 321  ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
             LA  L  N+ L  L L G+ +G +G+  L   +      L  L +   S+   G   +A
Sbjct: 905  DLASALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLA 964

Query: 381  EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVL 439
              +   + L  ++L MN + D G   + + + +    +  +DL    + +    +++ V+
Sbjct: 965  FALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVI 1024

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              +  + SLDLA N +G +G  AL E LK    +  L L  C + + G + ++  L  + 
Sbjct: 1025 TRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSR 1084

Query: 500  TISILDLRANGL 511
             ++ L+L  N L
Sbjct: 1085 HLASLNLMRNDL 1096



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 176/420 (41%), Gaps = 54/420 (12%)

Query: 189  NQTAEEVSFAANGITAAGIKAFD-------GVLQSNIALKTLNLSGNPIGDEGVKCLC-- 239
            ++ AE  S A  G+    IK  D        VL ++  L+ L+LSG+ +  E +K LC  
Sbjct: 714  DEFAEAWSGAPQGLK---IKTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVK 770

Query: 240  --------------------------DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
                                        L+ N  + RL L+   LR+E  +   E L++ 
Sbjct: 771  LRQPACKIQNLIFKGARVTPGLRHLWMTLIINRNITRLDLTGCRLREEDVRTACEALRHP 830

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK-SL 332
                 LEL+   +  +    +++ L  + +++SL L GN     G  +L   L+    +L
Sbjct: 831  QC--ALELDRCGLTPASCREISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTL 888

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCKSLL 390
            ++L L    +     + L S L   +G L  L +  + + +KG   +   +K  +C  L 
Sbjct: 889  QKLILGSCGLTAATCQDLASALIENQG-LTHLSLSGDELGSKGMSLLCRAVKLSSC-GLQ 946

Query: 391  WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLD 449
             + L    +   G   +A AL  NR +T + L  N +   G + +  V+ + S  +  LD
Sbjct: 947  KLALNACSLDVAGCGFLAFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLD 1006

Query: 450  LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            L    + A   K+LS V+     + +L L    +G  G   + + L+  NT++ L L A 
Sbjct: 1007 LVNCRLTASCCKSLSNVITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEAC 1066

Query: 510  GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDL 567
            GL  E   GC  LS   +A+   +H+   +L  N L  +G   L  +F      L +I L
Sbjct: 1067 GLTSE---GCKALS---AALTCSRHLASLNLMRNDLGPRGMTTLCSAFMHPTSNLQTIGL 1120



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 151/359 (42%), Gaps = 17/359 (4%)

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALG 318
            DE  + +  +L  +  LR L+L+ +++      +L   L + +  I++L   G      G
Sbjct: 733  DEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKLRQPACKIQNLIFKGARVTP-G 791

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
               L   L  N+++  L L G  + +E +R     L   +     L++    ++      
Sbjct: 792  LRHLWMTLIINRNITRLDLTGCRLREEDVRTACEALRHPQ---CALELDRCGLTPASCRE 848

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIAR 437
            +++ +    SL  ++L  N + D+G + + DALK    T+  + LG   + +     +A 
Sbjct: 849  ISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLAS 908

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
             L +N  +T L L+ + +G+ G   L   +K     +  L L  C +  +G  F+A  L 
Sbjct: 909  ALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALM 968

Query: 497  YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
             N  ++ L L  N L D       G++     +      L     +N    A C      
Sbjct: 969  GNRHLTHLSLSMNPLEDP------GMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSN 1022

Query: 557  VVNEA--LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            V+  +  L S+DLA N + D+G  A+ + LK      +T L L    LT  G  AL+ A
Sbjct: 1023 VITRSPRLRSLDLAANALGDEGIAALCEGLKQKN--TLTRLGLEACGLTSEGCKALSAA 1079


>gi|56118314|ref|NP_001007815.1| NACHT, LRR and PYD domains-containing protein 5 [Bos taurus]
 gi|75071173|sp|Q647I9.1|NALP5_BOVIN RecName: Full=NACHT, LRR and PYD domains-containing protein 5;
            AltName: Full=Mater protein homolog
 gi|51980125|gb|AAU20764.1| maternal antigen that embryo require [Bos taurus]
          Length = 1098

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 4/348 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R  + +D++G    +E +    E+L + Q A E +     G+T A  +    VL ++ +L
Sbjct: 736  RNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTPASCREISQVLATSGSL 795

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GVK LCD L V    +++L L S  L     + +A  L  N  L  L
Sbjct: 796  KSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLASALIENQGLTHL 855

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+ + +   G + L  A+ L +  ++ L LN       G   LA  L GN+ L  L L 
Sbjct: 856  SLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALMGNRHLTHLSLS 915

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G+  L   +      L  LD+ N  ++A     ++  I     L  ++L  N 
Sbjct: 916  MNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVITRSPRLRSLDLAANA 975

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GDEG   + + LKQ  T+T + L    + S+G  A++  L  +  + SL+L  N +G  
Sbjct: 976  LGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRHLASLNLMRNDLGPR 1035

Query: 459  GAKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            G   L S  +    N+ T+ L   Q  A     +  + R    + I D
Sbjct: 1036 GMTTLCSAFMHPTSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVVISD 1083



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 164/373 (43%), Gaps = 16/373 (4%)

Query: 152  QTLNEFAKELRAFSS-------VDMSGRNFGDEGLFFLAESLGYNQTAEEVS---FAANG 201
            +TL+E  ++L +  S       +D+SG     E +  L   L   Q A ++    F    
Sbjct: 663  KTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKL--RQPACKIQNLIFKGAR 720

Query: 202  ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRD 260
            +T  G++     L  N  +  L+L+G  + +E V+  C+ L      +E L+L    L  
Sbjct: 721  VTP-GLRHLWMTLIINRNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTP 779

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGA 319
               + I+++L  +  L+ L L  N +   G  SL +AL +   T++ L L      A   
Sbjct: 780  ASCREISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATC 839

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
              LA  L  N+ L  L L G+ +G +G+  L   +      L  L +   S+   G   +
Sbjct: 840  QDLASALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFL 899

Query: 380  AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
            A  +   + L  ++L MN + D G   + + + +    +  +DL    + +    +++ V
Sbjct: 900  AFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNV 959

Query: 439  LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            +  +  + SLDLA N +G +G  AL E LK    +  L L  C + + G + ++  L  +
Sbjct: 960  ITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCS 1019

Query: 499  NTISILDLRANGL 511
              ++ L+L  N L
Sbjct: 1020 RHLASLNLMRNDL 1032



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 151/359 (42%), Gaps = 14/359 (3%)

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALG 318
            DE  + +  +L  +  LR L+L+ +++      +L   L + +  I++L   G      G
Sbjct: 666  DEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKLRQPACKIQNLIFKGARVTP-G 724

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
               L   L  N+++  L L G  + +E ++     L   +  L  L +    ++      
Sbjct: 725  LRHLWMTLIINRNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTPASCRE 784

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIAR 437
            +++ +    SL  ++L  N + D+G + + DALK    T+  + LG   + +     +A 
Sbjct: 785  ISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLAS 844

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
             L +N  +T L L+ + +G+ G   L   +K     +  L L  C +  +G  F+A  L 
Sbjct: 845  ALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALM 904

Query: 497  YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
             N  ++ L L  N L D       G++     +      L     +N    A C      
Sbjct: 905  GNRHLTHLSLSMNPLEDP------GMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSN 958

Query: 557  VVNEA--LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            V+  +  L S+DLA N + D+G  A+ + LK      +T L L    LT  G  AL+ A
Sbjct: 959  VITRSPRLRSLDLAANALGDEGIAALCEGLKQKN--TLTRLGLEACGLTSEGCKALSAA 1015


>gi|145344361|ref|XP_001416703.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576929|gb|ABO94996.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 466

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 168/327 (51%), Gaps = 19/327 (5%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA--GVERLQ---LSSV 256
           I+  G +A   VL     LK L L    I D+G   L + +  +A  G  +L+   L S 
Sbjct: 105 ISNEGARAVAEVLAQGWDLKRLALRKVNISDDGAVSLAEAIKASAESGTSKLRWLDLGSN 164

Query: 257 DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN----G 311
           D+R  GA AI E L++  + +  L L  N I   G  +L + +  +ST+R + L     G
Sbjct: 165 DVRSRGAVAIGEALEHPGVNITRLTLRGNGICSEGMDALGKGISMSSTLRRIDLAHNGFG 224

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           + G    A+AL++G   N  LR L L  NSIG +G+RALM  L      +  LD+G N I
Sbjct: 225 DRGAIAFADALSRGTAPN--LRVLLLGFNSIGPDGMRALMQALM--HTDVEHLDVGCNVI 280

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK----IADALKQNRTITTIDLGGNNI 427
            A GA  +AE I N   L  +NL  N+IG  G       +A AL++N+T+  ++L GN +
Sbjct: 281 GASGAKAIAEMI-NSTRLKSLNLACNNIGLRGERSGLTALAKALEKNKTLEILNLRGNAL 339

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           H+  A  IA VL + + +  L++ YN +  +GA  ++E L+ +  +  L     ++  +G
Sbjct: 340 HTNCAQDIADVLLEETALIQLNVGYNELYDNGAWEIAEALEENTTLLGLDFQRNEVTDAG 399

Query: 488 AEFVADMLRYNNTISILDLRANGLRDE 514
           A  +A  L  N+ I  +DLR+N +  E
Sbjct: 400 ASNIAKTLAVNSIIQEIDLRSNMISSE 426



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 17/304 (5%)

Query: 173 NFGDEGLFFLAESLGYNQTAEE-------VSFAANGITAAGIKAFDGVLQ-SNIALKTLN 224
           N  D+G   LAE++    +AE        +   +N + + G  A    L+   + +  L 
Sbjct: 132 NISDDGAVSLAEAI--KASAESGTSKLRWLDLGSNDVRSRGAVAIGEALEHPGVNITRLT 189

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI--LRVLELN 282
           L GN I  EG+  L   +  ++ + R+ L+     D GA A A+ L   +   LRVL L 
Sbjct: 190 LRGNGICSEGMDALGKGISMSSTLRRIDLAHNGFGDRGAIAFADALSRGTAPNLRVLLLG 249

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G  +L +AL+ ++ +  L +  N  GA GA A+A+ +   + L+ L+L  N+I
Sbjct: 250 FNSIGPDGMRALMQALM-HTDVEHLDVGCNVIGASGAKAIAEMINSTR-LKSLNLACNNI 307

Query: 343 GDEGIRALMSGLS---SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           G  G R+ ++ L+    +   L +L++  N++    A  +A+ +    +L+ +N+  N++
Sbjct: 308 GLRGERSGLTALAKALEKNKTLEILNLRGNALHTNCAQDIADVLLEETALIQLNVGYNEL 367

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA +IA+AL++N T+  +D   N +   GAS IA+ L  NS+I  +DL  N I ++G
Sbjct: 368 YDNGAWEIAEALEENTTLLGLDFQRNEVTDAGASNIAKTLAVNSIIQEIDLRSNMISSEG 427

Query: 460 AKAL 463
              L
Sbjct: 428 VAKL 431



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 162/322 (50%), Gaps = 24/322 (7%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGI----RALMSGLSSRKGKLAVLDIGNNSISA 373
           GA A+A+ L     L+ L L   +I D+G      A+ +   S   KL  LD+G+N + +
Sbjct: 109 GARAVAEVLAQGWDLKRLALRKVNISDDGAVSLAEAIKASAESGTSKLRWLDLGSNDVRS 168

Query: 374 KGAFHVAEYIKNCK-SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           +GA  + E +++   ++  + L  N I  EG + +   +  + T+  IDL  N    +GA
Sbjct: 169 RGAVAIGEALEHPGVNITRLTLRGNGICSEGMDALGKGISMSSTLRRIDLAHNGFGDRGA 228

Query: 433 SAIARVLKDNSV--ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
            A A  L   +   +  L L +N IG DG +AL + L  H ++  L +G   IGASGA+ 
Sbjct: 229 IAFADALSRGTAPNLRVLLLGFNSIGPDGMRALMQAL-MHTDVEHLDVGCNVIGASGAKA 287

Query: 491 VADMLRYNNT-ISILDLRAN--GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG 547
           +A+M+  N+T +  L+L  N  GLR E     +GL+    A+   K +   +L  N L  
Sbjct: 288 IAEMI--NSTRLKSLNLACNNIGLRGER----SGLTALAKALEKNKTLEILNLRGNALH- 340

Query: 548 AKCLAQSFKVVNE--ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
             C      V+ E  AL  +++ +NE+ D+GA+ IA+AL+  E+  +  L+   N +T  
Sbjct: 341 TNCAQDIADVLLEETALIQLNVGYNELYDNGAWEIAEALE--ENTTLLGLDFQRNEVTDA 398

Query: 606 GQSALTDAKDLVYEMSEKEVNI 627
           G S +  AK L      +E+++
Sbjct: 399 GASNI--AKTLAVNSIIQEIDL 418



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 37/278 (13%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA--LK 221
            + + + G     EG+  L + +  + T   +  A NG    G  AF   L    A  L+
Sbjct: 185 ITRLTLRGNGICSEGMDALGKGISMSSTLRRIDLAHNGFGDRGAIAFADALSRGTAPNLR 244

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IG +G++ L   L+ +  VE L +    +   GAKAIAE++ N++ L+ L L
Sbjct: 245 VLLLGFNSIGPDGMRALMQALM-HTDVEHLDVGCNVIGASGAKAIAEMI-NSTRLKSLNL 302

Query: 282 NNNMI----DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             N I    + SG T+LA+AL +N T+  L+L GN                        L
Sbjct: 303 ACNNIGLRGERSGLTALAKALEKNKTLEILNLRGNA-----------------------L 339

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           H N   D      ++ +   +  L  L++G N +   GA+ +AE ++   +LL ++   N
Sbjct: 340 HTNCAQD------IADVLLEETALIQLNVGYNELYDNGAWEIAEALEENTTLLGLDFQRN 393

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           ++ D GA  IA  L  N  I  IDL  N I S+G + +
Sbjct: 394 EVTDAGASNIAKTLAVNSIIQEIDLRSNMISSEGVAKL 431



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 4/144 (2%)

Query: 164 FSSVDMSGRNFG----DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
             S++++  N G      GL  LA++L  N+T E ++   N +     +    VL    A
Sbjct: 297 LKSLNLACNNIGLRGERSGLTALAKALEKNKTLEILNLRGNALHTNCAQDIADVLLEETA 356

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LN+  N + D G   + + L +N  +  L     ++ D GA  IA+ L  NSI++ +
Sbjct: 357 LIQLNVGYNELYDNGAWEIAEALEENTTLLGLDFQRNEVTDAGASNIAKTLAVNSIIQEI 416

Query: 280 ELNNNMIDYSGFTSLAEALLENST 303
           +L +NMI   G   L    L+ +T
Sbjct: 417 DLRSNMISSEGVAKLQPYGLKTNT 440


>gi|14577933|gb|AAK68859.1|AF071546_1 ribonuclease/angiogenesis inhibitor [Mus musculus]
          Length = 456

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 182/388 (46%), Gaps = 17/388 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G   + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 52  ALTELSLRTNELGDGGAGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 111 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 171 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNAGIAALCPGLLLPSCKLGTLWLWECDITAEGCKDLCRVLRANQSLKELSLASNE 290

Query: 399 IGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++L +    + ++ +   ++ +        VL  +  +  L ++ NP+G 
Sbjct: 291 LKDEGARLLCESLLEPXCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N      C
Sbjct: 351 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNN------C 404

Query: 517 SGCNG----LSFFHSAIYSLKHMLFYSL 540
            G  G    L        +L+ ++ Y +
Sbjct: 405 MGGPGVLQLLESLKQPSCTLQQLVLYDI 432



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 105 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 165 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  + +L L      A G   L + L  N+SL+EL
Sbjct: 225 QELDLSSNKLGNAGIAALCPGLLLPSCKLGTLWLWECDITAEGCKDLCRVLRANQSLKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 285 SLASNELKDEGARLLCESLLEPXCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMS 344

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 345 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 404

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 405 MGGPGVLQLLESLK 418



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 185/425 (43%), Gaps = 13/425 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+     GD       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 2   SLDIQCEQLGD---ARWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 58

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD G   +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 59  RTNELGDGGAGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 118

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 119 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 179 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 238

Query: 404 AEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +    L  +  + T+ L   +I ++G   + RVL+ N  +  L LA N +  +GA+ 
Sbjct: 239 IAALCPGLLLPSCKLGTLWLWECDITAEGCKDLCRVLRANQSLKELSLASNELKDEGARL 298

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCN 520
           L E +L+    + +L +  C + A+   +   +L  + ++  L + +N L DE V   C 
Sbjct: 299 LCESLLEPXCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCK 358

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
            LS   + +      L+   C     G   LA    + N +L  +DL+ N +   G   +
Sbjct: 359 ALSQPDTVLRE----LWLGDCDVTNSGCSSLANVL-LANRSLRELDLSNNCMGGPGVLQL 413

Query: 581 AQALK 585
            ++LK
Sbjct: 414 LESLK 418



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 163/383 (42%), Gaps = 32/383 (8%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST--IRS 306
           E ++L    L +   K I+  ++ N  L  L L  N +   G   + + L +N T  I+ 
Sbjct: 26  EVVRLDDCGLTEVRCKDISSAVQANPALTELSLRTNELGDGGAGLVLQGL-QNPTCKIQK 84

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L        G   L   L    +LRELHL+ N +GD G++ L  GL   + +L  L +
Sbjct: 85  LSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQL 144

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGN 425
              +++A     +A  ++       + L  ND+ + G   +   LK +   + ++ L   
Sbjct: 145 EYCNLTATSCEPLASVLRVKADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENC 204

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIG 484
            I +     +  V+   + +  LDL+ N +G  G  AL   +L     + TL L  C I 
Sbjct: 205 GITAANCKDLCDVVASKASLQELDLSSNKLGNAGIAALCPGLLLPSCKLGTLWLWECDIT 264

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDE----VCSG---------------CN----G 521
           A G + +  +LR N ++  L L +N L+DE    +C                 C+     
Sbjct: 265 AEGCKDLCRVLRANQSLKELSLASNELKDEGARLLCESLLEPXCQLESLWIKTCSLTAAS 324

Query: 522 LSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             +F S +   + +L   +  N L  +G + L ++    +  L  + L   ++ + G  +
Sbjct: 325 CPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSS 384

Query: 580 IAQALKANEDVAVTSLNLANNFL 602
           +A  L AN   ++  L+L+NN +
Sbjct: 385 LANVLLANR--SLRELDLSNNCM 405


>gi|111226718|ref|XP_001134580.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|90970733|gb|EAS66896.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 624

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 170/342 (49%), Gaps = 37/342 (10%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEG 262
           A  ++  + + +S   L  LNL  N IGD G K L   L ++ + ++ L LS  DL    
Sbjct: 174 AMNLEYIEVIKKSMKQLTHLNLFSNKIGDIGFKNLAMALEESGSKLKFLGLSYCDLTKAS 233

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            K + EL K N  L+ + L+ N++   G   +A+ L  + ++  L L+ N  G LGA  +
Sbjct: 234 GKPLCELFKKNQSLQEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDLGAKEI 293

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            + L  NK++ EL L  NSIG                             +KG+ ++ +Y
Sbjct: 294 GEALSQNKTITELDLRCNSIG-----------------------------SKGSNYICQY 324

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+ +SL+ I+L+ N +G++GA  I  AL+ N+ I +I+L  N+I  +G   I   L  +
Sbjct: 325 LKDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIKSINLTRNSIQEQGIKFITNALSLS 384

Query: 443 -SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              I ++DL+ N +  +G K +S  L F+ +I  + L   +I ++G++ +   L  NNTI
Sbjct: 385 LCSIVTIDLSSNSLTLEGTKEISRALSFNRSIENINLSSNKIDSNGSKILCKSLLKNNTI 444

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
             L+L  N + ++ C       +F+  +   K++   +L +N
Sbjct: 445 KSLNLSMNDIGEQGC------IYFYRVLKKSKNLEHLNLSLN 480



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 11/299 (3%)

Query: 195 VSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           ++  +N I   G K     L+ S   LK L LS   +     K LC++   N  ++ + L
Sbjct: 193 LNLFSNKIGDIGFKNLAMALEESGSKLKFLGLSYCDLTKASGKPLCELFKKNQSLQEIIL 252

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S   L +EG   +A+ L  +  L  L L+NN I   G   + EAL +N TI  L L  N 
Sbjct: 253 SYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDLGAKEIGEALSQNKTITELDLRCNS 312

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G+ G+N + + L+ N+SL E+ L GNS+G++G   +   L + +  +  +++  NSI  
Sbjct: 313 IGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANGIGKALETNQ-YIKSINLTRNSIQE 371

Query: 374 KGAFHVAEYIKNCKSL-----LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           +G     ++I N  SL     + I+L  N +  EG ++I+ AL  NR+I  I+L  N I 
Sbjct: 372 QGI----KFITNALSLSLCSIVTIDLSSNSLTLEGTKEISRALSFNRSIENINLSSNKID 427

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           S G+  + + L  N+ I SL+L+ N IG  G      VLK   N+  L L   +IG  G
Sbjct: 428 SNGSKILCKSLLKNNTIKSLNLSMNDIGEQGCIYFYRVLKKSKNLEHLNLSLNKIGNKG 486



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 157/306 (51%), Gaps = 5/306 (1%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF---AANGITAAGIKAFDGV 213
             K ++  + +++     GD G   LA +L   ++  ++ F   +   +T A  K    +
Sbjct: 183 IKKSMKQLTHLNLFSNKIGDIGFKNLAMAL--EESGSKLKFLGLSYCDLTKASGKPLCEL 240

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            + N +L+ + LS N + +EG   +   L  +  + +L LS+ ++ D GAK I E L  N
Sbjct: 241 FKKNQSLQEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDLGAKEIGEALSQN 300

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L+L  N I   G   + + L +N ++  + L GN  G  GAN + K LE N+ ++
Sbjct: 301 KTITELDLRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIK 360

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            ++L  NSI ++GI+ + + LS     +  +D+ +NS++ +G   ++  +   +S+  IN
Sbjct: 361 SINLTRNSIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGTKEISRALSFNRSIENIN 420

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N I   G++ +  +L +N TI +++L  N+I  +G     RVLK +  +  L+L+ N
Sbjct: 421 LSSNKIDSNGSKILCKSLLKNNTIKSLNLSMNDIGEQGCIYFYRVLKKSKNLEHLNLSLN 480

Query: 454 PIGADG 459
            IG  G
Sbjct: 481 KIGNKG 486



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 39/312 (12%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN--------------------- 368
           K L  L+L  N IGD G + L   L     KL  L +                       
Sbjct: 188 KQLTHLNLFSNKIGDIGFKNLAMALEESGSKLKFLGLSYCDLTKASGKPLCELFKKNQSL 247

Query: 369 -------NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
                  N +  +G   +A+ +    SL+ ++L  N+IGD GA++I +AL QN+TIT +D
Sbjct: 248 QEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDLGAKEIGEALSQNKTITELD 307

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N+I SKG++ I + LKDN  +  +DL  N +G DGA  + + L+ +  I ++ L   
Sbjct: 308 LRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIKSINLTRN 367

Query: 482 QIGASGAEFVADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
            I   G +F+ + L  +  +I  +DL +N L  E   G   +S   S   S++++   S 
Sbjct: 368 SIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLE---GTKEISRALSFNRSIENINLSSN 424

Query: 541 CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
            I+   G+K L +S  + N  + S++L+ N+I + G     + LK ++++    LNL+  
Sbjct: 425 KIDS-NGSKILCKSL-LKNNTIKSLNLSMNDIGEQGCIYFYRVLKKSKNLE--HLNLS-- 478

Query: 601 FLTKFGQSALTD 612
            L K G   L +
Sbjct: 479 -LNKIGNKGLIN 489



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 2/259 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L + S + L E  K+ ++   + +S     +EG   +A+ L Y+ +  ++S + N I   
Sbjct: 229 LTKASGKPLCELFKKNQSLQEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDL 288

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G K     L  N  +  L+L  N IG +G   +C  L DN  +  + L    L ++GA  
Sbjct: 289 GAKEIGEALSQNKTITELDLRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANG 348

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAK 324
           I + L+ N  ++ + L  N I   G   +  AL L   +I ++ L+ N     G   +++
Sbjct: 349 IGKALETNQYIKSINLTRNSIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGTKEISR 408

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N+S+  ++L  N I   G + L   L  +   +  L++  N I  +G  +    +K
Sbjct: 409 ALSFNRSIENINLSSNKIDSNGSKILCKSL-LKNNTIKSLNLSMNDIGEQGCIYFYRVLK 467

Query: 385 NCKSLLWINLYMNDIGDEG 403
             K+L  +NL +N IG++G
Sbjct: 468 KSKNLEHLNLSLNKIGNKG 486



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 105/192 (54%), Gaps = 1/192 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+   + G +G  ++ + L  N++  E+    N +   G       L++N  +K
Sbjct: 301 KTITELDLRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIK 360

Query: 222 TLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           ++NL+ N I ++G+K + + L +    +  + LSS  L  EG K I+  L  N  +  + 
Sbjct: 361 SINLTRNSIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGTKEISRALSFNRSIENIN 420

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L++N ID +G   L ++LL+N+TI+SL+L+ N  G  G     + L+ +K+L  L+L  N
Sbjct: 421 LSSNKIDSNGSKILCKSLLKNNTIKSLNLSMNDIGEQGCIYFYRVLKKSKNLEHLNLSLN 480

Query: 341 SIGDEGIRALMS 352
            IG++G+  L+S
Sbjct: 481 KIGNKGLINLLS 492


>gi|320168044|gb|EFW44943.1| hypothetical protein CAOG_02949 [Capsaspora owczarzaki ATCC 30864]
          Length = 406

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 116/219 (52%), Gaps = 29/219 (13%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DE AKAIAE LK N+ L  + L+ N +D +G  ++AEAL  N+T++ L+L  N+ G  GA
Sbjct: 33  DEEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGA 92

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ N +LR L L  N IGD G +A+                   +++ K    +
Sbjct: 93  QAIAEALKVNTNLRWLDLIDNQIGDAGAQAI-------------------ALALKANTTL 133

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            EY           L  N IGD GA+ IA+ALK N T+  + L GN I   GA  IA  L
Sbjct: 134 TEY----------TLDKNQIGDAGAQAIAEALKGNMTVQKLYLRGNQIGDIGAQEIAEAL 183

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           K N+ +T LDL  N IG  G +A+ E  + +  +  LK+
Sbjct: 184 KMNTTLTELDLRSNCIGNAGLQAIREASQVNRTLTRLKI 222



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           R LEL + MID     ++AEAL  N+T+ ++ L+ N     GA A+A+ L+ N +L++L+
Sbjct: 23  RWLELCD-MIDDEEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLY 81

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD G +A                             +AE +K   +L W++L  
Sbjct: 82  LWANWIGDAGAQA-----------------------------IAEALKVNTNLRWLDLID 112

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGD GA+ IA ALK N T+T   L  N I   GA AIA  LK N  +  L L  N IG
Sbjct: 113 NQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQAIAEALKGNMTVQKLYLRGNQIG 172

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             GA+ ++E LK +  +  L L    IG +G + + +  + N T++ L +
Sbjct: 173 DIGAQEIAEALKMNTTLTELDLRSNCIGNAGLQAIREASQVNRTLTRLKI 222



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 150 SKQTLNEFAKEL--------RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           S +++N+  +EL        R     DM      DE    +AE+L  N T   V    N 
Sbjct: 3   SYESMNQSQRELYDRVKNATRWLELCDM----IDDEEAKAIAEALKVNTTLTAVCLDENQ 58

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +  AG +A    L+ N  LK L L  N IGD G + + + L  N  +  L L    + D 
Sbjct: 59  LDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGAQAIAEALKVNTNLRWLDLIDNQIGDA 118

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+AIA  LK N+ L    L+ N I  +G  ++AEAL  N T++ L+L GN  G +GA  
Sbjct: 119 GAQAIALALKANTTLTEYTLDKNQIGDAGAQAIAEALKGNMTVQKLYLRGNQIGDIGAQE 178

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           +A+ L+ N +L EL L  N IG+ G++A+
Sbjct: 179 IAEALKMNTTLTELDLRSNCIGNAGLQAI 207



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 98/187 (52%), Gaps = 7/187 (3%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I DE  +A+   L       AV  +  N +   GA  +AE +K   +L  + L+ N IGD
Sbjct: 31  IDDEEAKAIAEALKVNTTLTAVC-LDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGD 89

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ IA+ALK N  +  +DL  N I   GA AIA  LK N+ +T   L  N IG  GA+
Sbjct: 90  AGAQAIAEALKVNTNLRWLDLIDNQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQ 149

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           A++E LK +  +  L L   QIG  GA+ +A+ L+ N T++ LDLR+N      C G  G
Sbjct: 150 AIAEALKGNMTVQKLYLRGNQIGDIGAQEIAEALKMNTTLTELDLRSN------CIGNAG 203

Query: 522 LSFFHSA 528
           L     A
Sbjct: 204 LQAIREA 210



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 110/229 (48%), Gaps = 31/229 (13%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           I DE  K + + L  N  +  + L    L   GA+AIAE LK N+ L+ L L  N I  +
Sbjct: 31  IDDEEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDA 90

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+ +R L L  N  G  GA A+A  L+ N +L E  L  N IGD G +A
Sbjct: 91  GAQAIAEALKVNTNLRWLDLIDNQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQA 150

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           +   L   KG + V  +               Y++            N IGD GA++IA+
Sbjct: 151 IAEAL---KGNMTVQKL---------------YLRG-----------NQIGDIGAQEIAE 181

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL--DLAYNPIG 456
           ALK N T+T +DL  N I + G  AI    + N  +T L  D   NP+ 
Sbjct: 182 ALKMNTTLTELDLRSNCIGNAGLQAIREASQVNRTLTRLKIDDQINPLA 230



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K     ++V +        G   +AE+L  N T +++   AN I  AG +
Sbjct: 34  EEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGAQ 93

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L+ L+L  N IGD G + +   L  N  +    L    + D GA+AIAE
Sbjct: 94  AIAEALKVNTNLRWLDLIDNQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQAIAE 153

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  ++ L L  N I   G   +AEAL  N+T+  L L  N  G  G  A+ +  + 
Sbjct: 154 ALKGNMTVQKLYLRGNQIGDIGAQEIAEALKMNTTLTELDLRSNCIGNAGLQAIREASQV 213

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           N++L  L +      D+ I  L   L SR
Sbjct: 214 NRTLTRLKI------DDQINPLAFSLLSR 236



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 35/196 (17%)

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I  + A AIA  LK N+ +T++ L  N +   GA+A++E LK +  +  L L    IG +
Sbjct: 31  IDDEEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDA 90

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ 546
           GA+ +A+ L+ N  +  LDL  N + D                                 
Sbjct: 91  GAQAIAEALKVNTNLRWLDLIDNQIGDA-------------------------------- 118

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           GA+ +A + K  N  LT   L  N+I D GA AIA+ALK N  + V  L L  N +   G
Sbjct: 119 GAQAIALALKA-NTTLTEYTLDKNQIGDAGAQAIAEALKGN--MTVQKLYLRGNQIGDIG 175

Query: 607 QSALTDAKDLVYEMSE 622
              + +A  +   ++E
Sbjct: 176 AQEIAEALKMNTTLTE 191


>gi|320164574|gb|EFW41473.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 485

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 136/259 (52%), Gaps = 4/259 (1%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L LS   + +  A+A+ E LK N+ L  L L+ N I      ++A+ L  N TI++L L 
Sbjct: 24  LMLSGARMNEAEAQAVVEGLKVNTKLIFLSLSANPI---AAVTIADLLRVNKTIQNLFLQ 80

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G   A A+A  L+ N +L +L L  N IGD G  A+   L      L  L +  N 
Sbjct: 81  ENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAVAIADALKLNM-TLKKLRLDENQ 139

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  +A+ +K   +L  + L  N IG  GA+ IA+AL  N T+T + L  N I   
Sbjct: 140 IGDAGAVAIADALKLNTTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDA 199

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  LK N+ +T L L    IG  GA+A++E LK +  +  L+L   QIG  GA+ 
Sbjct: 200 GAQAIAEALKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQA 259

Query: 491 VADMLRYNNTISILDLRAN 509
           +A+ L+ N T   +DL +N
Sbjct: 260 IAEALKGNPTGITVDLNSN 278



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 136/270 (50%), Gaps = 6/270 (2%)

Query: 188 YNQTAEEVSFAANG--ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           Y+    EV    +G  +  A  +A    L+ N  L  L+LS NPI       + D+L  N
Sbjct: 15  YDYVKNEVVLMLSGARMNEAEAQAVVEGLKVNTKLIFLSLSANPIA---AVTIADLLRVN 71

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             ++ L L    + D  A AIA+ LK N+ L  L+L  N I  +G  ++A+AL  N T++
Sbjct: 72  KTIQNLFLQENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLK 131

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L+ N  G  GA A+A  L+ N +L  L L  N IG  G +A+   L+     +  L 
Sbjct: 132 KLRLDENQIGDAGAVAIADALKLNTTLARLLLVENQIGKAGAQAIAEALTVNT-TVTELR 190

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   GA  +AE +K   +L  + L+   IGD GA+ IA+ALK N T+  + L GN
Sbjct: 191 LDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGN 250

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            I   GA AIA  LK N    ++DL  N I
Sbjct: 251 QIGDIGAQAIAEALKGNPTGITVDLNSNCI 280



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 136/291 (46%), Gaps = 39/291 (13%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLD 365
           L L+G       A A+ +GL+ N  L  L L  N I    I  L+     R  K +  L 
Sbjct: 24  LMLSGARMNEAEAQAVVEGLKVNTKLIFLSLSANPIAAVTIADLL-----RVNKTIQNLF 78

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I    A  +A+ +K   +L  ++L +N IGD GA  IADALK N T+  + L  N
Sbjct: 79  LQENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDEN 138

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA AIA  LK N+ +  L L  N IG  GA+A++E L  +  +  L+L   QIG 
Sbjct: 139 QIGDAGAVAIADALKLNTTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGD 198

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
           +GA+ +A+ L+ N T++ L L    + D                                
Sbjct: 199 AGAQAIAEALKVNTTLTELRLHQTQIGDV------------------------------- 227

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
            GA+ +A++ KV N  L  + L+ N+I D GA AIA+ALK N       LN
Sbjct: 228 -GAQAIAEALKV-NTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITVDLN 276



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 1/186 (0%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L  N T  ++    N I  AG  A    L+ N+ LK L L  N IGD G   + D L  N
Sbjct: 96  LKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIADALKLN 155

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             + RL L    +   GA+AIAE L  N+ +  L L+ N I  +G  ++AEAL  N+T+ 
Sbjct: 156 TTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLT 215

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L+    G +GA A+A+ L+ N +L +L L GN IGD G +A+   L      + V D
Sbjct: 216 ELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITV-D 274

Query: 366 IGNNSI 371
           + +N I
Sbjct: 275 LNSNCI 280



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 2/140 (1%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G   +AE+L  N T  E+    N I  AG +A    L+ N  L  L L    IGD
Sbjct: 167 QIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGD 226

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  +  LQLS   + D GA+AIAE LK N     ++LN+N ID +   
Sbjct: 227 VGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITVDLNSNCIDRAFVQ 286

Query: 293 SLAEALLENSTIRSLHLNGN 312
            + +A  + +  R L+L+ +
Sbjct: 287 LVKQA--QKTKNRGLYLSND 304


>gi|291277984|gb|ADD91459.1| leucine rich repeat containing protein [Adineta vaga]
          Length = 316

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 100/174 (57%), Gaps = 1/174 (0%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           + IGD+G + +   L      L  LD+G N I  +GA H+ + ++   +L  +NL  N +
Sbjct: 144 DEIGDQGAQLIGDALRINT-TLTALDLGYNEIGHQGAQHIGDALRTNTTLSTLNLRSNQV 202

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G +GA+ I DAL+ N T++T++L  N +  +GA  I   L+ N+ +T+LDL YN IG  G
Sbjct: 203 GHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLGYNEIGDQG 262

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           A+ + + L+ +  + TL L   +I   GAE + D LR N T++ LDL  N + D
Sbjct: 263 AQLIGDALRINTTLRTLNLANNEIDDQGAEHIGDALRINTTLTTLDLGYNEIGD 316



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 35/213 (16%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  I+L  ++IGD+GA+ I DAL+ N T+T +DLG N I  +GA  I   L+ N+ +++
Sbjct: 135 TLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLST 194

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L+L  N +G  GA+ + + L+ +  ++TL L   Q+G  GA+ + D LR N T++ LDL 
Sbjct: 195 LNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLG 254

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            N + D                                QGA+ +  + + +N  L +++L
Sbjct: 255 YNEIGD--------------------------------QGAQLIGDALR-INTTLRTLNL 281

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           A NEI D GA  I  AL+ N    +T+L+L  N
Sbjct: 282 ANNEIDDQGAEHIGDALRIN--TTLTTLDLGYN 312



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 33/214 (15%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  +D+G + I  +GA  + + ++   +L  ++L  N+IG +GA+ I DAL+ N T++T+
Sbjct: 136 LTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLSTL 195

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +L  N +  +GA  I   L+ N+ +++L+L  N +G  GA+ + + L+ +  +  L LG+
Sbjct: 196 NLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLGY 255

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
            +IG  GA+ + D LR N T+  L+L  N + D                           
Sbjct: 256 NEIGDQGAQLIGDALRINTTLRTLNLANNEIDD--------------------------- 288

Query: 541 CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                QGA+ +  + + +N  LT++DL +NEI D
Sbjct: 289 -----QGAEHIGDALR-INTTLTTLDLGYNEIGD 316



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 35/198 (17%)

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
           T+TTIDLG + I  +GA  I   L+ N+ +T+LDL YN IG  GA+ + + L+ +  ++T
Sbjct: 135 TLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLST 194

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHM 535
           L L   Q+G  GA+ + D LR N T+S L+LR+N                      + H 
Sbjct: 195 LNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSN---------------------QVGH- 232

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
                     QGA+ +  + +  N  LT++DL +NEI D GA  I  AL+ N    + +L
Sbjct: 233 ----------QGAQHIGDALRT-NTTLTALDLGYNEIGDQGAQLIGDALRIN--TTLRTL 279

Query: 596 NLANNFLTKFGQSALTDA 613
           NLANN +   G   + DA
Sbjct: 280 NLANNEIDDQGAEHIGDA 297



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 97/184 (52%), Gaps = 1/184 (0%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           + L T++L  + IGD+G + + D L  N  +  L L   ++  +GA+ I + L+ N+ L 
Sbjct: 134 LTLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLS 193

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L L +N + + G   + +AL  N+T+ +L+L  N  G  GA  +   L  N +L  L L
Sbjct: 194 TLNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDL 253

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N IGD+G + +   L      L  L++ NN I  +GA H+ + ++   +L  ++L  N
Sbjct: 254 GYNEIGDQGAQLIGDALRINT-TLRTLNLANNEIDDQGAEHIGDALRINTTLTTLDLGYN 312

Query: 398 DIGD 401
           +IGD
Sbjct: 313 EIGD 316



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 88/182 (48%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             +++D+     GD+G   + ++L  N T   +    N I   G +     L++N  L T
Sbjct: 135 TLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLST 194

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N +G +G + + D L  N  +  L L S  +  +GA+ I + L+ N+ L  L+L 
Sbjct: 195 LNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLG 254

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G   + +AL  N+T+R+L+L  N     GA  +   L  N +L  L L  N I
Sbjct: 255 YNEIGDQGAQLIGDALRINTTLRTLNLANNEIDDQGAEHIGDALRINTTLTTLDLGYNEI 314

Query: 343 GD 344
           GD
Sbjct: 315 GD 316


>gi|320164588|gb|EFW41487.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 485

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 135/259 (52%), Gaps = 4/259 (1%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L LS   + +  A+A+ E LK N+ L  L L+ N I      ++A+ L  N TI++L L 
Sbjct: 24  LMLSGARMNEAEAQAVVEGLKVNTKLIFLSLSTNPI---AAVTIADLLRVNKTIQNLFLQ 80

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G   A A+A  L+ N +L +L L  N IGD G  A+   L      L  L +  N 
Sbjct: 81  ENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAVAIADALKLNM-TLKKLRLDENQ 139

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  +A  +K   +L  + L  N IG  GA+ IA+AL  N T+T + L  N I   
Sbjct: 140 IGDAGAVAIANALKLNTTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDA 199

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  LK N+ +T L L    IG  GA+A++E LK +  +  L+L   QIG  GA+ 
Sbjct: 200 GAQAIAEALKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQA 259

Query: 491 VADMLRYNNTISILDLRAN 509
           +A+ L+ N T   +DL +N
Sbjct: 260 IAEALKGNPTGITVDLNSN 278



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 136/270 (50%), Gaps = 6/270 (2%)

Query: 188 YNQTAEEVSFAANG--ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           Y+    EV    +G  +  A  +A    L+ N  L  L+LS NPI       + D+L  N
Sbjct: 15  YDYVKNEVVLMLSGARMNEAEAQAVVEGLKVNTKLIFLSLSTNPIA---AVTIADLLRVN 71

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             ++ L L    + D  A AIA+ LK N+ L  L+L  N I  +G  ++A+AL  N T++
Sbjct: 72  KTIQNLFLQENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLK 131

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L+ N  G  GA A+A  L+ N +L  L L  N IG  G +A+   L+     +  L 
Sbjct: 132 KLRLDENQIGDAGAVAIANALKLNTTLARLLLVENQIGKAGAQAIAEALTVNT-TVTELR 190

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   GA  +AE +K   +L  + L+   IGD GA+ IA+ALK N T+  + L GN
Sbjct: 191 LDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGN 250

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            I   GA AIA  LK N    ++DL  N I
Sbjct: 251 QIGDIGAQAIAEALKGNPTGITVDLNSNCI 280



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 136/291 (46%), Gaps = 39/291 (13%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLD 365
           L L+G       A A+ +GL+ N  L  L L  N I    I  L+     R  K +  L 
Sbjct: 24  LMLSGARMNEAEAQAVVEGLKVNTKLIFLSLSTNPIAAVTIADLL-----RVNKTIQNLF 78

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I    A  +A+ +K   +L  ++L +N IGD GA  IADALK N T+  + L  N
Sbjct: 79  LQENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDEN 138

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA AIA  LK N+ +  L L  N IG  GA+A++E L  +  +  L+L   QIG 
Sbjct: 139 QIGDAGAVAIANALKLNTTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGD 198

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
           +GA+ +A+ L+ N T++ L L    + D                                
Sbjct: 199 AGAQAIAEALKVNTTLTELRLHQTQIGDV------------------------------- 227

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
            GA+ +A++ KV N  L  + L+ N+I D GA AIA+ALK N       LN
Sbjct: 228 -GAQAIAEALKV-NTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITVDLN 276



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 115/237 (48%), Gaps = 13/237 (5%)

Query: 136 TNLLSGFT-GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEE 194
           TN ++  T   L R +K   N F +E              GD     +A++L  N T  +
Sbjct: 56  TNPIAAVTIADLLRVNKTIQNLFLQE-----------NQIGDADAVAIADALKVNTTLND 104

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +    N I  AG  A    L+ N+ LK L L  N IGD G   + + L  N  + RL L 
Sbjct: 105 LDLKVNQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIANALKLNTTLARLLLV 164

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +   GA+AIAE L  N+ +  L L+ N I  +G  ++AEAL  N+T+  L L+    
Sbjct: 165 ENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQI 224

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           G +GA A+A+ L+ N +L +L L GN IGD G +A+   L      + V D+ +N I
Sbjct: 225 GDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITV-DLNSNCI 280



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 2/139 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G  G   +AE+L  N T  E+    N I  AG +A    L+ N  L  L L    IGD 
Sbjct: 168 IGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGDV 227

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  LQLS   + D GA+AIAE LK N     ++LN+N ID +    
Sbjct: 228 GAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITVDLNSNCIDRAFVQL 287

Query: 294 LAEALLENSTIRSLHLNGN 312
           + +A  + +  R L+L+ +
Sbjct: 288 VKQA--QKTKNRGLYLSND 304


>gi|326436454|gb|EGD82024.1| hypothetical protein PTSG_11909 [Salpingoeca sp. ATCC 50818]
          Length = 1015

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 1/202 (0%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  E +Q L   A   +    VD+S R+FGD+    +A +L  N   + +S + N I  
Sbjct: 490 KLTEEGQQLLRAIANN-KCSEYVDLSSRSFGDDEARAIAVALRRNTRLKALSLSDNSIGP 548

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G  +F   L+ N  L  L    N  G++G   + ++L+DN  + +L L +  +  EGAK
Sbjct: 549 GGAASFAHGLRDNTVLTELRFINNSFGNQGAASMAELLMDNHVITKLSLRNNSIGPEGAK 608

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+AE+L++N+ LR L L++N I   G  +LA  L EN ++ +LHL+GN  G  GA ALA 
Sbjct: 609 ALAEMLRHNTTLRTLFLSDNFIGPGGAEALATILSENDSLTTLHLSGNSIGNDGAAALAG 668

Query: 325 GLEGNKSLRELHLHGNSIGDEG 346
           GL  N  L +L L+ N IG +G
Sbjct: 669 GLRSNTGLHKLDLYLNDIGPKG 690



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 1/190 (0%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L + +  NK    + L   S GD+  RA+   L  R  +L  L + +NSI   GA   A 
Sbjct: 498 LLRAIANNKCSEYVDLSSRSFGDDEARAIAVALR-RNTRLKALSLSDNSIGPGGAASFAH 556

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +++   L  +    N  G++GA  +A+ L  N  IT + L  N+I  +GA A+A +L+ 
Sbjct: 557 GLRDNTVLTELRFINNSFGNQGAASMAELLMDNHVITKLSLRNNSIGPEGAKALAEMLRH 616

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ + +L L+ N IG  GA+AL+ +L  + ++ TL L    IG  GA  +A  LR N  +
Sbjct: 617 NTTLRTLFLSDNFIGPGGAEALATILSENDSLTTLHLSGNSIGNDGAAALAGGLRSNTGL 676

Query: 502 SILDLRANGL 511
             LDL  N +
Sbjct: 677 HKLDLYLNDI 686



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 1/214 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            L  A+  N     + L+    G   A A+A  L  N  L+ L L  NSIG  G  +   
Sbjct: 497 QLLRAIANNKCSEYVDLSSRSFGDDEARAIAVALRRNTRLKALSLSDNSIGPGGAASFAH 556

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
           GL      L  L   NNS   +GA  +AE + +   +  ++L  N IG EGA+ +A+ L+
Sbjct: 557 GLRD-NTVLTELRFINNSFGNQGAASMAELLMDNHVITKLSLRNNSIGPEGAKALAEMLR 615

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+ T+ L  N I   GA A+A +L +N  +T+L L+ N IG DGA AL+  L+ +  
Sbjct: 616 HNTTLRTLFLSDNFIGPGGAEALATILSENDSLTTLHLSGNSIGNDGAAALAGGLRSNTG 675

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           ++ L L    IG  GA  +A +L +N  +  L L
Sbjct: 676 LHKLDLYLNDIGPKGAVALAAVLAHNQDLEYLRL 709



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 5/186 (2%)

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           E  +++  A+  N+    +DL   +     A AIA  L+ N+ + +L L+ N IG  GA 
Sbjct: 493 EEGQQLLRAIANNKCSEYVDLSSRSFGDDEARAIAVALRRNTRLKALSLSDNSIGPGGAA 552

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           + +  L+ +  +  L+      G  GA  +A++L  N+ I+ L LR N +  E   G   
Sbjct: 553 SFAHGLRDNTVLTELRFINNSFGNQGAASMAELLMDNHVITKLSLRNNSIGPE---GAKA 609

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
           L+       +L+  LF S       GA+ LA +    N++LT++ L+ N I +DGA A+A
Sbjct: 610 LAEMLRHNTTLR-TLFLSDNFIGPGGAEALA-TILSENDSLTTLHLSGNSIGNDGAAALA 667

Query: 582 QALKAN 587
             L++N
Sbjct: 668 GGLRSN 673


>gi|398019091|ref|XP_003862710.1| ribonuclease inhibitor-like protein [Leishmania donovani]
 gi|322500940|emb|CBZ36017.1| ribonuclease inhibitor-like protein [Leishmania donovani]
          Length = 736

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 189/389 (48%), Gaps = 49/389 (12%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L  +L  N+    L LS   LRD+GA+ IA+L+K N  L  +++ +N I + G   +A
Sbjct: 161 EALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLIA 220

Query: 296 EALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
            ALLEN+T+ SL +      NGN+ G  GA A+ + L  N+ L  L++  N +G  G+  
Sbjct: 221 RALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNGLGAGGVAF 280

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA----E 405
           + S L  R G L  L++ +N++  +GA  +A  ++      W  L  N + D+G      
Sbjct: 281 IASAL-ERNGSLTRLNLSSNNLGLEGARVLASALEAAHVTHW-ELQRNHLDDKGGACFLN 338

Query: 406 KIADALKQNRTITT-IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            +A A++    +   +DL  N +    A A  +VL  ++ +T+L L  NP+GA G KA+S
Sbjct: 339 ALAGAIRNGHDVVEYLDLDNNALGEGCADAAGKVLAVSASLTTLRLCGNPLGA-GVKAIS 397

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
             L  + ++N+L L  C I   GA  +  +L  N+T+  LD+  N ++D           
Sbjct: 398 TGLNENHSLNSLYLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKD----------- 446

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                 GA  LA+    VN+ LT+ +L+ N I   G   +A+A+
Sbjct: 447 ---------------------GGAVELAKGL-AVNKCLTTWNLSSNRIGHAGGLEMAKAV 484

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + N    +  LNL  N + +    A++D+
Sbjct: 485 QKNR--TLRHLNLRRNLMLEATGEAISDS 511



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 151/305 (49%), Gaps = 8/305 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G + G  G   + E L  N+    ++ ++NG+ A G+      L+ N +L  LNLS N
Sbjct: 240 VNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNGLGAGGVAFIASALERNGSLTRLNLSSN 299

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA----KAIAELLKN-NSILRVLELNN 283
            +G EG + L   L + A V   +L    L D+G      A+A  ++N + ++  L+L+N
Sbjct: 300 NLGLEGARVLASAL-EAAHVTHWELQRNHLDDKGGACFLNALAGAIRNGHDVVEYLDLDN 358

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +      +  + L  ++++ +L L GN  GA G  A++ GL  N SL  L+L   SI 
Sbjct: 359 NALGEGCADAAGKVLAVSASLTTLRLCGNPLGA-GVKAISTGLNENHSLNSLYLSKCSID 417

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G  AL + L      L  LD+ NN +   GA  +A+ +   K L   NL  N IG  G
Sbjct: 418 HIGAAALGAVLCVNH-TLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAG 476

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             ++A A+++NRT+  ++L  N +      AI+   + N+ +  LD+AYN      A ++
Sbjct: 477 GLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRSNNTLERLDVAYNDFSYACAMSI 536

Query: 464 SEVLK 468
              L+
Sbjct: 537 ERALE 541



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 163/357 (45%), Gaps = 14/357 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           +S +D+SG    D+G  F+A+ +  N+T   +  A+N I   G       L  N  + +L
Sbjct: 173 YSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLIARALLENNTVISL 232

Query: 224 NL------SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           ++      +GN IG  G + + ++L  N  + RL +SS  L   G   IA  L+ N  L 
Sbjct: 233 DIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNGLGAGGVAFIASALERNGSLT 292

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY----GGALGANALAKGLE-GNKSL 332
            L L++N +   G   LA AL E + +    L  N+    GGA   NALA  +  G+  +
Sbjct: 293 RLNLSSNNLGLEGARVLASAL-EAAHVTHWELQRNHLDDKGGACFLNALAGAIRNGHDVV 351

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L  N++G EG       + +    L  L +  N + A G   ++  +    SL  +
Sbjct: 352 EYLDLDNNALG-EGCADAAGKVLAVSASLTTLRLCGNPLGA-GVKAISTGLNENHSLNSL 409

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L    I   GA  +   L  N T+  +D+  N +   GA  +A+ L  N  +T+ +L+ 
Sbjct: 410 YLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSS 469

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           N IG  G   +++ ++ +  +  L L    +  +  E ++D  R NNT+  LD+  N
Sbjct: 470 NRIGHAGGLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRSNNTLERLDVAYN 526



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 21/211 (9%)

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           AE +A  L +N   + +DL GN +   GA  IA+++K N  +  +D+A N IG  G   +
Sbjct: 160 AEALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLI 219

Query: 464 SEVLKFHGNINTLKLGW------CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
           +  L  +  + +L +G         IG  GAE + ++LR N  ++ L++ +NGL      
Sbjct: 220 ARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNGL------ 273

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINY--LQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
           G  G++F  SA+     +   +L  N   L+GA+ LA + +  +  +T  +L  N + D 
Sbjct: 274 GAGGVAFIASALERNGSLTRLNLSSNNLGLEGARVLASALEAAH--VTHWELQRNHLDDK 331

Query: 576 GAF----AIAQALKANEDVAVTSLNLANNFL 602
           G      A+A A++   DV V  L+L NN L
Sbjct: 332 GGACFLNALAGAIRNGHDV-VEYLDLDNNAL 361


>gi|296477123|tpg|DAA19238.1| TPA: NACHT, LRR and PYD domains-containing protein 5 [Bos taurus]
          Length = 1098

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 4/348 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R  + +D++G    +E +    E+L + Q A E +     G+T A  +    VL ++ +L
Sbjct: 736  RNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTPASCREISQVLATSGSL 795

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GVK LCD L V    +++L L S  L     + +A  L  N  L  L
Sbjct: 796  KSLSLTGNKVVDQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLASALIENQGLTHL 855

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+ + +   G + L  A+ L +  ++ L LN       G   LA  L GN+ L  L L 
Sbjct: 856  SLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALMGNRHLTHLSLS 915

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G+  L   +      L  LD+ N  ++A     ++  I     L  ++L  N 
Sbjct: 916  MNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVITRSPRLRSLDLAANA 975

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GDEG   + + LKQ  T+T + L    + S+G  A++  L  +  + SL+L  N +G  
Sbjct: 976  LGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRHLASLNLMRNDLGPR 1035

Query: 459  GAKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            G   L S  +    N+ T+ L   Q  A     +  + R    + I D
Sbjct: 1036 GMTTLCSAFMHPTSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVVISD 1083



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 164/373 (43%), Gaps = 16/373 (4%)

Query: 152  QTLNEFAKELRAFSS-------VDMSGRNFGDEGLFFLAESLGYNQTAEEVS---FAANG 201
            +TL+E  ++L +  S       +D+SG     E +  L   L   Q A ++    F    
Sbjct: 663  KTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKL--RQPACKIQNLIFKGAR 720

Query: 202  ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRD 260
            +T  G++     L  N  +  L+L+G  + +E V+  C+ L      +E L+L    L  
Sbjct: 721  VTP-GLRHLWMTLIINRNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTP 779

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGA 319
               + I+++L  +  L+ L L  N +   G  SL +AL +   T++ L L      A   
Sbjct: 780  ASCREISQVLATSGSLKSLSLTGNKVVDQGVKSLCDALKVTPCTLQKLILGSCGLTAATC 839

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
              LA  L  N+ L  L L G+ +G +G+  L   +      L  L +   S+   G   +
Sbjct: 840  QDLASALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFL 899

Query: 380  AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
            A  +   + L  ++L MN + D G   + + + +    +  +DL    + +    +++ V
Sbjct: 900  AFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNV 959

Query: 439  LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            +  +  + SLDLA N +G +G  AL E LK    +  L L  C + + G + ++  L  +
Sbjct: 960  ITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCS 1019

Query: 499  NTISILDLRANGL 511
              ++ L+L  N L
Sbjct: 1020 RHLASLNLMRNDL 1032



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 151/359 (42%), Gaps = 14/359 (3%)

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALG 318
            DE  + +  +L  +  LR L+L+ +++      +L   L + +  I++L   G      G
Sbjct: 666  DEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKLRQPACKIQNLIFKGARVTP-G 724

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
               L   L  N+++  L L G  + +E ++     L   +  L  L +    ++      
Sbjct: 725  LRHLWMTLIINRNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTPASCRE 784

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIAR 437
            +++ +    SL  ++L  N + D+G + + DALK    T+  + LG   + +     +A 
Sbjct: 785  ISQVLATSGSLKSLSLTGNKVVDQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLAS 844

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
             L +N  +T L L+ + +G+ G   L   +K     +  L L  C +  +G  F+A  L 
Sbjct: 845  ALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALM 904

Query: 497  YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
             N  ++ L L  N L D       G++     +      L     +N    A C      
Sbjct: 905  GNRHLTHLSLSMNPLEDP------GMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSN 958

Query: 557  VVNEA--LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            V+  +  L S+DLA N + D+G  A+ + LK      +T L L    LT  G  AL+ A
Sbjct: 959  VITRSPRLRSLDLAANALGDEGIAALCEGLKQKN--TLTRLGLEACGLTSEGCKALSAA 1015


>gi|428181132|gb|EKX49997.1| hypothetical protein GUITHDRAFT_67409 [Guillardia theta CCMP2712]
          Length = 335

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 132/247 (53%), Gaps = 3/247 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           ++ L L  + +GDEGV+ L + L  +  +  L+L    +   GA +I  +L  N  +RVL
Sbjct: 24  IRKLYLGQDGLGDEGVQALAEFLSKDCKLNELRLHDNGIGSRGASSICSVLHLNQSMRVL 83

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L +N I   G  +    L  NS++  L L+GN     G   LA  L  NK+LR LHL  
Sbjct: 84  VLGHNRIGELGAAAAGLLLRFNSSLTDLDLSGNELRDEGVKLLADCLPQNKTLRNLHLAR 143

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWINLYMN 397
           N  G +G +A    L++    L  +++G+N + A+GA H++  +  KN + +  ++L   
Sbjct: 144 NQFGPKGAKAFADALTAGGSSLFRVNLGSNKLRAEGAKHLSSMLLSKNLE-ISHLHLAAA 202

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           DIGDEGA  +ADA+K+NRT+  + L  N I   GA  +A  L+ N  ++ L +  N I +
Sbjct: 203 DIGDEGATSLADAMKENRTLCALYLQSNGIMDAGAQQLAEALRVNCTLSELHVDGNSISS 262

Query: 458 DGAKALS 464
            G  AL+
Sbjct: 263 KGVSALA 269



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 140/292 (47%), Gaps = 35/292 (11%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GDEG+  LAE L  +    E+    NGI + G  +   VL  N +++ L L  N IG+ 
Sbjct: 34  LGDEGVQALAEFLSKDCKLNELRLHDNGIGSRGASSICSVLHLNQSMRVLVLGHNRIGEL 93

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G      +L  N+ +  L LS  +LRDEG K                             
Sbjct: 94  GAAAAGLLLRFNSSLTDLDLSGNELRDEGVKL---------------------------- 125

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMS 352
           LA+ L +N T+R+LHL  N  G  GA A A  L  G  SL  ++L  N +  EG + L S
Sbjct: 126 LADCLPQNKTLRNLHLARNQFGPKGAKAFADALTAGGSSLFRVNLGSNKLRAEGAKHLSS 185

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L S+  +++ L +    I  +GA  +A+ +K  ++L  + L  N I D GA+++A+AL+
Sbjct: 186 MLLSKNLEISHLHLAAADIGDEGATSLADAMKENRTLCALYLQSNGIMDAGAQQLAEALR 245

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            N T++ + + GN+I SKG SA+A          S+ L   P+  D   AL+
Sbjct: 246 VNCTLSELHVDGNSISSKGVSALAL------ASASMPLVLRPLPVDKRTALA 291



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 40/282 (14%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLL 390
           +R+L+L  + +GDEG++AL                             AE++ K+CK L 
Sbjct: 24  IRKLYLGQDGLGDEGVQAL-----------------------------AEFLSKDCK-LN 53

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L+ N IG  GA  I   L  N+++  + LG N I   GA+A   +L+ NS +T LDL
Sbjct: 54  ELRLHDNGIGSRGASSICSVLHLNQSMRVLVLGHNRIGELGAAAAGLLLRFNSSLTDLDL 113

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY-NNTISILDLRAN 509
           + N +  +G K L++ L  +  +  L L   Q G  GA+  AD L    +++  ++L +N
Sbjct: 114 SGNELRDEGVKLLADCLPQNKTLRNLHLARNQFGPKGAKAFADALTAGGSSLFRVNLGSN 173

Query: 510 GLRDEVCSGCNGL-SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
            LR E   G   L S   S    + H+   +  I   +GA  LA + K  N  L ++ L 
Sbjct: 174 KLRAE---GAKHLSSMLLSKNLEISHLHLAAADIGD-EGATSLADAMK-ENRTLCALYLQ 228

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            N I D GA  +A+AL+ N    ++ L++  N ++  G SAL
Sbjct: 229 SNGIMDAGAQQLAEALRVN--CTLSELHVDGNSISSKGVSAL 268


>gi|78369510|ref|NP_001030396.1| ribonuclease inhibitor [Bos taurus]
 gi|74268096|gb|AAI02769.1| Ribonuclease/angiogenin inhibitor 1 [Bos taurus]
          Length = 456

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 169/356 (47%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L       +++S     +T AG     GVL+S   L+
Sbjct: 52  SLTELSLRTNELGDGGVLLVLQGLQSPTCKIQKLSLQNCCLTEAGCGVLPGVLRSLPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ LC+ L+D    +E+LQL    L     + +A +L+    L+ L 
Sbjct: 112 ELHLSDNPLGDAGLRLLCEGLLDPRCRLEKLQLEYCSLTAASCEPLAAVLRATRDLKELV 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G  +L   L E++  + +L L      A     L   +    SL++L L  
Sbjct: 172 VSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL S   +L  L +    ++  G   +   ++  ++L  ++L  N +
Sbjct: 232 NRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRELCRVLQAKEALKELSLAGNSL 291

Query: 400 GDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++L Q    + ++ +      +      + +L  N  +  L L+ NP+G  
Sbjct: 292 GDEGAQLLCESLLQPGCQLESLWVKSCGFTAACCQHFSSMLTQNKHLLELQLSSNPLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G   L + L   G +   L +G C++  S    +A +L  + ++  LDL  NGL D
Sbjct: 352 GVHVLCQALGQPGTVLRVLWVGDCELTNSSCGGLASLLLASPSLRELDLSNNGLGD 407



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 184/413 (44%), Gaps = 22/413 (5%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E L   Q  E V     G+T    K     LQ+N +L  L+L  N +GD GV     +LV
Sbjct: 17  ELLPLIQQYEVVRLDDCGLTEVRCKDIGSALQANASLTELSLRTNELGDGGV-----LLV 71

Query: 244 ------DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
                     +++L L +  L + G   +  +L++   LR L L++N +  +G   L E 
Sbjct: 72  LQGLQSPTCKIQKLSLQNCCLTEAGCGVLPGVLRSLPTLRELHLSDNPLGDAGLRLLCEG 131

Query: 298 LLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           LL+    +  L L      A     LA  L   + L+EL +  N IG+ G++AL  GL+ 
Sbjct: 132 LLDPRCRLEKLQLEYCSLTAASCEPLAAVLRATRDLKELVVSNNDIGEAGVQALCRGLAE 191

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNR 415
              +L  L + N  ++A     +   + +  SL  ++L  N +GD G AE     L  + 
Sbjct: 192 SACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGSNRLGDAGLAELCPGLLSPSS 251

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NIN 474
            + T+ L   ++   G   + RVL+    +  L LA N +G +GA+ L E L   G  + 
Sbjct: 252 QLRTLWLWECDLTVSGCRELCRVLQAKEALKELSLAGNSLGDEGAQLLCESLLQPGCQLE 311

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           +L +  C   A+  +  + ML  N  +  L L +N L D   +G + L        ++  
Sbjct: 312 SLWVKSCGFTAACCQHFSSMLTQNKHLLELQLSSNPLGD---AGVHVLCQALGQPGTVLR 368

Query: 535 MLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           +L+   C   L  + C  LA S  + + +L  +DL+ N + D G   +  +L+
Sbjct: 369 VLWVGDC--ELTNSSCGGLA-SLLLASPSLRELDLSNNGLGDPGVLQLLGSLE 418



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 10/320 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   +   E++      +TAA  +    VL++ 
Sbjct: 105 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPRCRLEKLQLEYCSLTAASCEPLAAVLRAT 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
             LK L +S N IG+ GV+ LC  L ++A  +E L+L +  L     K +  ++ + + L
Sbjct: 165 RDLKELVVSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L +N +  +G   L   LL  +S +R+L L        G   L + L+  ++L+EL
Sbjct: 225 KDLDLGSNRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRELCRVLQAKEALKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNS+GDEG + L   L     +L  L + +   +A    H +  +   K LL + L 
Sbjct: 285 SLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTAACCQHFSSMLTQNKHLLELQLS 344

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G   +  AL Q  T+   + +G   + +     +A +L  +  +  LDL+ N 
Sbjct: 345 SNPLGDAGVHVLCQALGQPGTVLRVLWVGDCELTNSSCGGLASLLLASPSLRELDLSNNG 404

Query: 455 IGADGAKALSEVLKFHGNIN 474
           +G  G      VL+  G++ 
Sbjct: 405 LGDPG------VLQLLGSLE 418


>gi|431910090|gb|ELK13163.1| Ribonuclease inhibitor [Pteropus alecto]
          Length = 456

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 170/356 (47%), Gaps = 7/356 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIALK 221
            + +++     GD G+  L + L ++ T   +++S    G+T AG     G L+S   L+
Sbjct: 53  LTELNLCNNELGDAGMRLLLQGL-HSPTCKIQKLSVQNCGLTEAGCGVLPGALRSVPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L LS NP+GD G++ LCD L+D    +ERLQ+   +L     + +A +L+     + L 
Sbjct: 112 ELYLSNNPLGDAGLRLLCDGLLDPQCHIERLQVEYCNLTAASCEPLAAVLRAKREFKELM 171

Query: 281 LNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G  +L   L ++ S + SL L G          L   +    SL  L L  
Sbjct: 172 VSNNDLGDAGVRALCRGLADSASPLESLRLEGCNLTLASCQDLGSIVASKASLCTLELGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL S   +L  L +    I+A G   +   +K   SL  +++  N +
Sbjct: 232 NKLGDAGIAKLCPGLLSPSSQLRTLWLWECDITASGCRDLCRVLKAKGSLKELSVAGNAV 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++ L  +  + ++        +      + +L  N+ +  L L+ N +G  
Sbjct: 292 GDEGAQLLCESLLAPSCHLESLWAKSCGFTAACCQHFSAMLARNTRLLELQLSGNSLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G +   L LG C++  +G   +A +L  N+++  LDL  N + D
Sbjct: 352 GVQQLCQGLGQPGAVLRVLCLGDCEVTNNGCSSLASLLLANHSLCELDLSNNCMSD 407



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 175/407 (42%), Gaps = 10/407 (2%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL- 242
           E L   Q  + V     GIT    K     L  N  L  LNL  N +GD G++ L   L 
Sbjct: 17  ELLPLIQQHQVVRLIDCGITEGRCKDISSALGDNPTLTELNLCNNELGDAGMRLLLQGLH 76

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
                +++L + +  L + G   +   L++   LR L L+NN +  +G   L + LL+  
Sbjct: 77  SPTCKIQKLSVQNCGLTEAGCGVLPGALRSVPTLRELYLSNNPLGDAGLRLLCDGLLDPQ 136

Query: 303 T-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             I  L +      A     LA  L   +  +EL +  N +GD G+RAL  GL+     L
Sbjct: 137 CHIERLQVEYCNLTAASCEPLAAVLRAKREFKELMVSNNDLGDAGVRALCRGLADSASPL 196

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTI 420
             L +   +++      +   + +  SL  + L  N +GD G  K+    L  +  + T+
Sbjct: 197 ESLRLEGCNLTLASCQDLGSIVASKASLCTLELGDNKLGDAGIAKLCPGLLSPSSQLRTL 256

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLG 479
            L   +I + G   + RVLK    +  L +A N +G +GA+ L E +L    ++ +L   
Sbjct: 257 WLWECDITASGCRDLCRVLKAKGSLKELSVAGNAVGDEGAQLLCESLLAPSCHLESLWAK 316

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFY 538
            C   A+  +  + ML  N  +  L L  N L D  V   C GL    + +     +L  
Sbjct: 317 SCGFTAACCQHFSAMLARNTRLLELQLSGNSLGDAGVQQLCQGLGQPGAVL----RVLCL 372

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
             C     G   LA S  + N +L  +DL+ N + D G   +A++L+
Sbjct: 373 GDCEVTNNGCSSLA-SLLLANHSLCELDLSNNCMSDVGVLQLAESLQ 418



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 11/271 (4%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIK 208
           S + L    +  R F  + +S  + GD G+  L   L  + +  E +      +T A  +
Sbjct: 153 SCEPLAAVLRAKREFKELMVSNNDLGDAGVRALCRGLADSASPLESLRLEGCNLTLASCQ 212

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIA 267
               ++ S  +L TL L  N +GD G+  LC  +L  ++ +  L L   D+   G + + 
Sbjct: 213 DLGSIVASKASLCTLELGDNKLGDAGIAKLCPGLLSPSSQLRTLWLWECDITASGCRDLC 272

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA-----L 322
            +LK    L+ L +  N +   G   L E+LL  S     HL   +  + G  A      
Sbjct: 273 RVLKAKGSLKELSVAGNAVGDEGAQLLCESLLAPSC----HLESLWAKSCGFTAACCQHF 328

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           +  L  N  L EL L GNS+GD G++ L  GL      L VL +G+  ++  G   +A  
Sbjct: 329 SAMLARNTRLLELQLSGNSLGDAGVQQLCQGLGQPGAVLRVLCLGDCEVTNNGCSSLASL 388

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           +    SL  ++L  N + D G  ++A++L+Q
Sbjct: 389 LLANHSLCELDLSNNCMSDVGVLQLAESLQQ 419



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 14/271 (5%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  N +L EL+L  N +GD G+R L+ GL S   K+  L + N  ++  G   +  
Sbjct: 43  ISSALGDNPTLTELNLCNNELGDAGMRLLLQGLHSPTCKIQKLSVQNCGLTEAGCGVLPG 102

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLK 440
            +++  +L  + L  N +GD G   + D L   +  I  + +   N+ +     +A VL+
Sbjct: 103 ALRSVPTLRELYLSNNPLGDAGLRLLCDGLLDPQCHIERLQVEYCNLTAASCEPLAAVLR 162

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNN 499
                  L ++ N +G  G +AL   L    + + +L+L  C +  +  + +  ++    
Sbjct: 163 AKREFKELMVSNNDLGDAGVRALCRGLADSASPLESLRLEGCNLTLASCQDLGSIVASKA 222

Query: 500 TISILDLRANGLRD----EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           ++  L+L  N L D    ++C G        S    L+ +  +  C     G + L +  
Sbjct: 223 SLCTLELGDNKLGDAGIAKLCPG------LLSPSSQLRTLWLWE-CDITASGCRDLCRVL 275

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           K    +L  + +A N + D+GA  + ++L A
Sbjct: 276 K-AKGSLKELSVAGNAVGDEGAQLLCESLLA 305


>gi|156370329|ref|XP_001628423.1| predicted protein [Nematostella vectensis]
 gi|156215399|gb|EDO36360.1| predicted protein [Nematostella vectensis]
          Length = 426

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 3/292 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  NI  K ++L+ + +G  G   L   L  +  VE+L L    L++EGA++ A++LK+N
Sbjct: 32  LLQNIENKEISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDN 91

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L L  N +   G  ++ E +  ++ IR L L+ N        AL+KGL    +L+
Sbjct: 92  CYITELNLAGNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLTLK 151

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L  NS  + G   L  G+++    +  LD+  N +  KGA  + + +    S+  ++
Sbjct: 152 ELRLSHNSFSESGGELLAPGIAANYS-VEYLDLSWNHLRMKGAIAICKAMGENASIRVLD 210

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N   D+GA  + +AL+ N T+  +DL  N I  KGA A+++ L  N  +  L + +N
Sbjct: 211 LSWNGFADDGAAAMGNALRHNSTLKELDLSHNRITKKGAFALSKGLAVNDALRVLKIGFN 270

Query: 454 PIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           P  +DG  AL + ++ +    +  L L    +G    EF+ + +++N    I
Sbjct: 271 PFESDGTMALLKAMRNNAKSAMEELHLNNITVGKGVLEFLDEYMKHNPNFQI 322



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + ++    G  G   LA +L  + T E++    N +   G ++F  +L+ N  +  LNL+
Sbjct: 41  ISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELNLA 100

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +   G K + +I+  +  + +L LS  +  D+  +A+++ L     L+ L L++N  
Sbjct: 101 GNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLTLKELRLSHNSF 160

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             SG   LA  +  N ++  L L+ N+    GA A+ K +  N S+R L L  N   D+G
Sbjct: 161 SESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRVLDLSWNGFADDG 220

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A+ + L      L  LD+ +N I+ KGAF +++ +    +L  + +  N    +G   
Sbjct: 221 AAAMGNAL-RHNSTLKELDLSHNRITKKGAFALSKGLAVNDALRVLKIGFNPFESDGTMA 279

Query: 407 IADALKQNRTITTIDLGGNNI 427
           +  A++ N      +L  NNI
Sbjct: 280 LLKAMRNNAKSAMEELHLNNI 300



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 134/303 (44%), Gaps = 34/303 (11%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           +LL+N   + + L  +  G  GA ALA+ L  + ++ +L L  N + +EG  +    L  
Sbjct: 31  SLLQNIENKEISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKD 90

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
               +  L++  N++S++GA  + E I     +  ++L  N+  D+  E ++  L    T
Sbjct: 91  -NCYITELNLAGNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLT 149

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  + L  N+    G   +A  +  N  +  LDL++N +   GA A+ + +  + +I  L
Sbjct: 150 LKELRLSHNSFSESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRVL 209

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L W      GA  + + LR+N+T+  LDL  N +                         
Sbjct: 210 DLSWNGFADDGAAAMGNALRHNSTLKELDLSHNRITK----------------------- 246

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                    +GA  L++    VN+AL  + + FN    DG  A+ +A++ N   A+  L+
Sbjct: 247 ---------KGAFALSKGL-AVNDALRVLKIGFNPFESDGTMALLKAMRNNAKSAMEELH 296

Query: 597 LAN 599
           L N
Sbjct: 297 LNN 299



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 117/248 (47%), Gaps = 35/248 (14%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           + + ++ +  +GA  +A  +    ++  ++L  N + +EGAE  A  LK N  IT ++L 
Sbjct: 41  ISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELNLA 100

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN + S+GA A+  ++  ++ I  LDL++N       +ALS+ L     +  L+L     
Sbjct: 101 GNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLTLKELRLSHNSF 160

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
             SG E +A  +  N ++  LDL  N LR                               
Sbjct: 161 SESGGELLAPGIAANYSVEYLDLSWNHLR------------------------------- 189

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
            ++GA  + ++    N ++  +DL++N   DDGA A+  AL+ N    +  L+L++N +T
Sbjct: 190 -MKGAIAICKAMG-ENASIRVLDLSWNGFADDGAAAMGNALRHNS--TLKELDLSHNRIT 245

Query: 604 KFGQSALT 611
           K G  AL+
Sbjct: 246 KKGAFALS 253



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 6/234 (2%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           FAK L+     + ++++G      G   + E +GY+    ++  + N       +A    
Sbjct: 84  FAKMLKDNCYITELNLAGNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKG 143

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L + + LK L LS N   + G + L   +  N  VE L LS   LR +GA AI + +  N
Sbjct: 144 LAATLTLKELRLSHNSFSESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMGEN 203

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +RVL+L+ N     G  ++  AL  NST++ L L+ N     GA AL+KGL  N +LR
Sbjct: 204 ASIRVLDLSWNGFADDGAAAMGNALRHNSTLKELDLSHNRITKKGAFALSKGLAVNDALR 263

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA-KGAFH-VAEYIKN 385
            L +  N    +G  AL+  + +   K A+ ++  N+I+  KG    + EY+K+
Sbjct: 264 VLKIGFNPFESDGTMALLKAMRN-NAKSAMEELHLNNITVGKGVLEFLDEYMKH 316



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 370 SISAKGAFHVA---EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           S S + +F +A    Y++ CK+L    +               +L QN     I L  + 
Sbjct: 2   STSGRRSFDLAGKSAYLRACKTLNVTPI--------------SSLLQNIENKEISLAHHG 47

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           +  +GA A+AR L  ++ +  LDL  N +  +GA++ +++LK +  I  L L    + + 
Sbjct: 48  LGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELNLAGNAMSSR 107

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ 546
           GA+ + +++ Y+N I  LDL  N   D+       LS   +A  +LK +       +   
Sbjct: 108 GAKAMGEIIGYSNYIRKLDLSFNNFIDK---DGEALSKGLAATLTLKELRLSHNSFSE-S 163

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           G + LA      N ++  +DL++N +R  GA AI +A+  N  + V  L+L+ N     G
Sbjct: 164 GGELLAPGI-AANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRV--LDLSWNGFADDG 220

Query: 607 QSALTDAKDLVYEMSEKEVNI 627
            +A+ +A  L +  + KE+++
Sbjct: 221 AAAMGNA--LRHNSTLKELDL 239


>gi|320166233|gb|EFW43132.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 419

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 29/204 (14%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+   + DE AKAIAE LK N  ++ L L  N I  +G  ++AEAL  N+T+  L+L  N
Sbjct: 6   LAERQIGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRN 65

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA A+A+ L+ N +L E  L GN IGD G +A                       
Sbjct: 66  QIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQA----------------------- 102

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
                 +AE +K    L+ ++L  N IGD GA+ IA+ALK N+T+TT+ L  N I  +GA
Sbjct: 103 ------IAEALKVNTKLIELSLSQNQIGDAGAQTIAEALKVNKTLTTLSLHKNQIGDEGA 156

Query: 433 SAIARVLKDNSVITSLDLAYNPIG 456
            AIA  L+DN +++SL L  N IG
Sbjct: 157 RAIAEALQDNKILSSLYLNENQIG 180



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 6/180 (3%)

Query: 337 LHGNS-----IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           + GNS     IGDE  +A+   L   K    +L +  N I   GA  +AE +K   ++  
Sbjct: 1   MEGNSLAERQIGDEEAKAIAEALKVNKAVKRLL-LWENRIGDAGAQAIAEALKVNTTMTH 59

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  N IG+ GA+ IA+ALK N T++  DL GN I   GA AIA  LK N+ +  L L+
Sbjct: 60  LYLQRNQIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLS 119

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+ ++E LK +  + TL L   QIG  GA  +A+ L+ N  +S L L  N +
Sbjct: 120 QNQIGDAGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQI 179



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 117/238 (49%), Gaps = 16/238 (6%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A+ L+ NK+++ L L  N IGD G +A+   L      +  L +  N I   GA  
Sbjct: 16  AKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNT-TMTHLYLQRNQIGNAGAQA 74

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K   +L   +L+ N IGD GA+ IA+ALK N  +  + L  N I   GA  IA  
Sbjct: 75  IAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQTIAEA 134

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N  +T+L L  N IG +GA+A++E L+ +  +++L L   QIG     +V   LR +
Sbjct: 135 LKVNKTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQIGY----YVEIALRRS 190

Query: 499 ------NTISI-----LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
                 NTI       +D+ +  LRD+     N   F    +Y   H  F      YL
Sbjct: 191 APSCEINTIKTTSTDGIDISSVILRDKEPMILNIWDFAGQELYLASHQFFLGERTVYL 248



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 88/149 (59%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +    I  + A  +AE +K  K++  + L+ N IGD GA+ IA+ALK N T+T + L  N
Sbjct: 6   LAERQIGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRN 65

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I + GA AIA  LK N+ ++  DL  N IG  GA+A++E LK +  +  L L   QIG 
Sbjct: 66  QIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGD 125

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDE 514
           +GA+ +A+ L+ N T++ L L  N + DE
Sbjct: 126 AGAQTIAEALKVNKTLTTLSLHKNQIGDE 154



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 35/212 (16%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGDE A+ IA+ALK N+ +  + L  N I   GA AIA  LK N+ +T L L  N IG  
Sbjct: 11  IGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRNQIGNA 70

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A++E LK +  ++   L   QIG  GA+ +A+ L+ N  +  L L  N + D     
Sbjct: 71  GAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGD----- 125

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                       GA+ +A++ K VN+ LT++ L  N+I D+GA 
Sbjct: 126 ---------------------------AGAQTIAEALK-VNKTLTTLSLHKNQIGDEGAR 157

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           AIA+AL+ N+   ++SL L  N +  + + AL
Sbjct: 158 AIAEALQDNK--ILSSLYLNENQIGYYVEIAL 187



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 93/175 (53%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++ R  GDE    +AE+L  N+  + +    N I  AG +A    L+ N  +  L L  N
Sbjct: 6   LAERQIGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRN 65

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+ G + + + L  N  +    L    + D GA+AIAE LK N+ L  L L+ N I  
Sbjct: 66  QIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGD 125

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           +G  ++AEAL  N T+ +L L+ N  G  GA A+A+ L+ NK L  L+L+ N IG
Sbjct: 126 AGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQIG 180



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 84/163 (51%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S A   I     KA    L+ N A+K L L  N IGD G + + + L  N  +  L L  
Sbjct: 5   SLAERQIGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQR 64

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + + GA+AIAE LK N+ L   +L  N I   G  ++AEAL  N+ +  L L+ N  G
Sbjct: 65  NQIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIG 124

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
             GA  +A+ L+ NK+L  L LH N IGDEG RA+   L   K
Sbjct: 125 DAGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQDNK 167



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 81/167 (48%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K  +A   + +     GD G   +AE+L  N T   +    N I  AG +
Sbjct: 14  EEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRNQIGNAGAQ 73

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L   +L GN IGD G + + + L  N  +  L LS   + D GA+ IAE
Sbjct: 74  AIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQTIAE 133

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            LK N  L  L L+ N I   G  ++AEAL +N  + SL+LN N  G
Sbjct: 134 ALKVNKTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQIG 180



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 66/137 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     G+ G   +AE+L  N T  E     N I   G +A  
Sbjct: 45  QAIAEALKVNTTMTHLYLQRNQIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIA 104

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L+LS N IGD G + + + L  N  +  L L    + DEGA+AIAE L+
Sbjct: 105 EALKVNTKLIELSLSQNQIGDAGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQ 164

Query: 272 NNSILRVLELNNNMIDY 288
           +N IL  L LN N I Y
Sbjct: 165 DNKILSSLYLNENQIGY 181


>gi|320169568|gb|EFW46467.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 428

 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 7/220 (3%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+   SL L  +  G +GA A+ + L+ N +L +++L+GN IGD G++ 
Sbjct: 14  GALAVAEALKVNAAAVSLFLGNSQIGDVGAIAMGEALKVNATLTQVYLNGNQIGDAGVQC 73

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY--MND----IGDEG 403
           +   L     KL  LD+  N I   GA  VAE +K   +L   + +  + D    IGD G
Sbjct: 74  IAEALKVNT-KLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDVGEQIGDAG 132

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ IA++LK NRT+TT  L  N I   GA AIA  L+ N  ++ + L +N IG  GA+A+
Sbjct: 133 AQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQFNQIGDIGAQAI 192

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           +E LK +  +  + L +  IG  GA+ + +  + N+TI +
Sbjct: 193 AEALKVNKTLFFINLRYNCIGTVGAQAIDEARKVNSTIDV 232



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 117/220 (53%), Gaps = 7/220 (3%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA A+AE LK N+    L L N+ I   G  ++ EAL  N+T+  ++LNGN  G  G   
Sbjct: 14  GALAVAEALKVNAAAVSLFLGNSQIGDVGAIAMGEALKVNATLTQVYLNGNQIGDAGVQC 73

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSG------LSSRKGKLAVLDIGNNSISAKG 375
           +A+ L+ N  L  L L  N IGD+G +A+         L +      + D+G   I   G
Sbjct: 74  IAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDVGEQ-IGDAG 132

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE +K  ++L    L  N IGD GA+ IA+AL+ N+T++ + L  N I   GA AI
Sbjct: 133 AQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQFNQIGDIGAQAI 192

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
           A  LK N  +  ++L YN IG  GA+A+ E  K +  I+ 
Sbjct: 193 AEALKVNKTLFFINLRYNCIGTVGAQAIDEARKVNSTIDV 232



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 120/255 (47%), Gaps = 35/255 (13%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  R  G+ G   +AE+L  N  A  +    + I   G  A    L+ N  L  + L+GN
Sbjct: 5   LERREVGEIGALAVAEALKVNAAAVSLFLGNSQIGDVGAIAMGEALKVNATLTQVYLNGN 64

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD GV+C+ + L  N  +  L L    + D+GAKA+AE LK N+ L      + + D 
Sbjct: 65  QIGDAGVQCIAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDV 124

Query: 289 ------SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
                 +G  ++AE+L  N T+ +  L  N  G  GA A+A+ L+ NK+L  +HL  N I
Sbjct: 125 GEQIGDAGAQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQFNQI 184

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A                             +AE +K  K+L +INL  N IG  
Sbjct: 185 GDIGAQA-----------------------------IAEALKVNKTLFFINLRYNCIGTV 215

Query: 403 GAEKIADALKQNRTI 417
           GA+ I +A K N TI
Sbjct: 216 GAQAIDEARKVNSTI 230



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 124/246 (50%), Gaps = 41/246 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  VAE +K   + + + L  + IGD GA  + +ALK N T+T + L GN I   G   
Sbjct: 14  GALAVAEALKVNAAAVSLFLGNSQIGDVGAIAMGEALKVNATLTQVYLNGNQIGDAGVQC 73

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI------NTLKLGWCQIGASGA 488
           IA  LK N+ + SLDL  N IG DGAKA++E LK +  +      +TL     QIG +GA
Sbjct: 74  IAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDVGEQIGDAGA 133

Query: 489 EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
           + +A+ L+ N T++   L  N + D                                 GA
Sbjct: 134 QAIAESLKLNRTLTTPGLETNQIGD--------------------------------AGA 161

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
           + +A++ +V N+ L+ + L FN+I D GA AIA+ALK N+   +  +NL  N +   G  
Sbjct: 162 QAIAEALQV-NKTLSYVHLQFNQIGDIGAQAIAEALKVNK--TLFFINLRYNCIGTVGAQ 218

Query: 609 ALTDAK 614
           A+ +A+
Sbjct: 219 AIDEAR 224



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT- 222
            + V ++G   GD G+  +AE+L  N     +    N I   G KA    L+ N  L+T 
Sbjct: 56  LTQVYLNGNQIGDAGVQCIAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETA 115

Query: 223 -----LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
                L   G  IGD G + + + L  N  +    L +  + D GA+AIAE L+ N  L 
Sbjct: 116 SHFDTLTDVGEQIGDAGAQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLS 175

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            + L  N I   G  ++AEAL  N T+  ++L  N  G +GA A+ +  + N ++
Sbjct: 176 YVHLQFNQIGDIGAQAIAEALKVNKTLFFINLRYNCIGTVGAQAIDEARKVNSTI 230



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 6/159 (3%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF------AANGITAA 205
           Q + E  K      S+D+     GD+G   +AE+L  N T E  S           I  A
Sbjct: 72  QCIAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDVGEQIGDA 131

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G +A    L+ N  L T  L  N IGD G + + + L  N  +  + L    + D GA+A
Sbjct: 132 GAQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQFNQIGDIGAQA 191

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           IAE LK N  L  + L  N I   G  ++ EA   NSTI
Sbjct: 192 IAEALKVNKTLFFINLRYNCIGTVGAQAIDEARKVNSTI 230


>gi|417401274|gb|JAA47528.1| Putative ribonuclease inhibitor [Desmodus rotundus]
          Length = 456

 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 160/350 (45%), Gaps = 18/350 (5%)

Query: 134 AGTNL-LSGFTGKLFRESKQTLNE----------FAKELRAFSSV---DMSGRNFGDEGL 179
           AGT+L L G      +  K +L             A  LRA  S+   D+S    GD GL
Sbjct: 66  AGTHLVLQGLQSPTCKVQKLSLQSCCLTEASGRALASTLRAIPSLRELDLSYNPLGDAGL 125

Query: 180 FFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL 238
             L E L   Q   E +      ++AA  +    VL++   LK L L+ N  G+ G + L
Sbjct: 126 QLLCEGLLDPQCHIESLELQYCSLSAASCQPLAAVLRARPELKELVLNSNDFGEAGTRTL 185

Query: 239 CDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           C  LVD+A + E L+L S  L     + +  +L   + LR LEL +N +   G  +L   
Sbjct: 186 CQALVDSACLLESLKLESCGLTSANCQDLCGVLAAKASLRDLELGDNRLGDVGVAALCPG 245

Query: 298 LL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           LL     +++L L      A G   L + L   +SLRE  + GN++GDEG+R L   L  
Sbjct: 246 LLSPGCQLKTLWLWECDITAGGCRDLCRVLRAKESLREFSIAGNAVGDEGVRLLCESLLE 305

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NR 415
              +L  L + + S++A    H++  +   +SL  + L  N + D G  ++   L Q   
Sbjct: 306 PCCRLESLWVKSCSLTAACCPHISAMLAQNRSLQELQLSNNKLEDAGVGELCRGLGQPGV 365

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            + T+ LG   +  KG S +A +L  +  +  LDL+ N +   G   L+E
Sbjct: 366 PLRTLWLGDCEVTDKGCSNLASLLLASRSLQELDLSNNCMSEVGILELAE 415



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 169/355 (47%), Gaps = 5/355 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +++     GD G   + + L       +++S  +  +T A  +A    L++  +L+ 
Sbjct: 53  LTELNLCSNELGDAGTHLVLQGLQSPTCKVQKLSLQSCCLTEASGRALASTLRAIPSLRE 112

Query: 223 LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS NP+GD G++ LC+ L+D    +E L+L    L     + +A +L+    L+ L L
Sbjct: 113 LDLSYNPLGDAGLQLLCEGLLDPQCHIESLELQYCSLSAASCQPLAAVLRARPELKELVL 172

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           N+N    +G  +L +AL++++  + SL L      +     L   L    SLR+L L  N
Sbjct: 173 NSNDFGEAGTRTLCQALVDSACLLESLKLESCGLTSANCQDLCGVLAAKASLRDLELGDN 232

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD G+ AL  GL S   +L  L +    I+A G   +   ++  +SL   ++  N +G
Sbjct: 233 RLGDVGVAALCPGLLSPGCQLKTLWLWECDITAGGCRDLCRVLRAKESLREFSIAGNAVG 292

Query: 401 DEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           DEG   + ++L +    + ++ +   ++ +     I+ +L  N  +  L L+ N +   G
Sbjct: 293 DEGVRLLCESLLEPCCRLESLWVKSCSLTAACCPHISAMLAQNRSLQELQLSNNKLEDAG 352

Query: 460 AKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
              L   L   G  + TL LG C++   G   +A +L  + ++  LDL  N + +
Sbjct: 353 VGELCRGLGQPGVPLRTLWLGDCEVTDKGCSNLASLLLASRSLQELDLSNNCMSE 407



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 149/361 (41%), Gaps = 11/361 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+DM      D       E L   Q  + +     GIT    +     L+ N  L  LNL
Sbjct: 2   SLDMHYEQLSD---TRWTELLPRMQQCQVIRLVDCGITEGRCQDVSSALRDNPTLTELNL 58

Query: 226 SGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD G    L  +      V++L L S  L +   +A+A  L+    LR L+L+ N
Sbjct: 59  CSNELGDAGTHLVLQGLQSPTCKVQKLSLQSCCLTEASGRALASTLRAIPSLRELDLSYN 118

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E LL+    I SL L      A     LA  L     L+EL L+ N  G
Sbjct: 119 PLGDAGLQLLCEGLLDPQCHIESLELQYCSLSAASCQPLAAVLRARPELKELVLNSNDFG 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G R L   L      L  L + +  +++     +   +    SL  + L  N +GD G
Sbjct: 179 EAGTRTLCQALVDSACLLESLKLESCGLTSANCQDLCGVLAAKASLRDLELGDNRLGDVG 238

Query: 404 AEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +    L     + T+ L   +I + G   + RVL+    +    +A N +G +G + 
Sbjct: 239 VAALCPGLLSPGCQLKTLWLWECDITAGGCRDLCRVLRAKESLREFSIAGNAVGDEGVRL 298

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD----EVCS 517
           L E +L+    + +L +  C + A+    ++ ML  N ++  L L  N L D    E+C 
Sbjct: 299 LCESLLEPCCRLESLWVKSCSLTAACCPHISAMLAQNRSLQELQLSNNKLEDAGVGELCR 358

Query: 518 G 518
           G
Sbjct: 359 G 359



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 6/274 (2%)

Query: 150 SKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAA 205
           S  +    A  LRA      + ++  +FG+ G   L ++L  +    E +   + G+T+A
Sbjct: 150 SAASCQPLAAVLRARPELKELVLNSNDFGEAGTRTLCQALVDSACLLESLKLESCGLTSA 209

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAK 264
             +   GVL +  +L+ L L  N +GD GV  LC  +L     ++ L L   D+   G +
Sbjct: 210 NCQDLCGVLAAKASLRDLELGDNRLGDVGVAALCPGLLSPGCQLKTLWLWECDITAGGCR 269

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            +  +L+    LR   +  N +   G   L E+LLE    + SL +      A     ++
Sbjct: 270 DLCRVLRAKESLREFSIAGNAVGDEGVRLLCESLLEPCCRLESLWVKSCSLTAACCPHIS 329

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  N+SL+EL L  N + D G+  L  GL      L  L +G+  ++ KG  ++A  +
Sbjct: 330 AMLAQNRSLQELQLSNNKLEDAGVGELCRGLGQPGVPLRTLWLGDCEVTDKGCSNLASLL 389

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              +SL  ++L  N + + G  ++A++ +Q   +
Sbjct: 390 LASRSLQELDLSNNCMSEVGILELAESAQQPSCV 423



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 150/355 (42%), Gaps = 16/355 (4%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST--IRSLHLNGNYGGALGAN 320
            + ++  L++N  L  L L +N +  +G T L    L++ T  ++ L L           
Sbjct: 40  CQDVSSALRDNPTLTELNLCSNELGDAG-THLVLQGLQSPTCKVQKLSLQSCCLTEASGR 98

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA  L    SLREL L  N +GD G++ L  GL   +  +  L++   S+SA     +A
Sbjct: 99  ALASTLRAIPSLRELDLSYNPLGDAGLQLLCEGLLDPQCHIESLELQYCSLSAASCQPLA 158

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVL 439
             ++    L  + L  ND G+ G   +  AL  +   + ++ L    + S     +  VL
Sbjct: 159 AVLRARPELKELVLNSNDFGEAGTRTLCQALVDSACLLESLKLESCGLTSANCQDLCGVL 218

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYN 498
              + +  L+L  N +G  G  AL   L   G  + TL L  C I A G   +  +LR  
Sbjct: 219 AAKASLRDLELGDNRLGDVGVAALCPGLLSPGCQLKTLWLWECDITAGGCRDLCRVLRAK 278

Query: 499 NTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSL--KHMLFYSLCINYLQGAKCLAQSF 555
            ++    +  N + DE V   C  L      + SL  K     + C  ++     LAQ  
Sbjct: 279 ESLREFSIAGNAVGDEGVRLLCESLLEPCCRLESLWVKSCSLTAACCPHISAM--LAQ-- 334

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
              N +L  + L+ N++ D G   + + L     V + +L L +  +T  G S L
Sbjct: 335 ---NRSLQELQLSNNKLEDAGVGELCRGL-GQPGVPLRTLWLGDCEVTDKGCSNL 385


>gi|405975326|gb|EKC39900.1| hypothetical protein CGI_10016632 [Crassostrea gigas]
          Length = 601

 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 29/275 (10%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +E S   +G+   G KA    L++N  ++ +NL GN I  EG   L  +L +N  V  L 
Sbjct: 176 KEFSMKYHGLGPNGAKAIAWPLKTNKKIEKINLEGNWIEAEGSIYLAKMLKNNIYVTELH 235

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+   + +EGA+AI+++L+ N ++  L+L+ N I+  G   L   LL+NS+I+ L+L  N
Sbjct: 236 LAENRIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLANN 295

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                 A  L + L  N++L                               +D+  N + 
Sbjct: 296 KFEERAAGWLREVLTNNETLE-----------------------------TVDLSWNHLR 326

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            +GA  +AE ++    L  +NL MN    +G+E +  ALK NRT+  +DL  N I   GA
Sbjct: 327 TRGAIAIAEGVQENYGLRILNLAMNGFAQDGSEAMGKALKNNRTLLELDLSHNRIPEAGA 386

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +AI++ L+ N  +  L +A NP+G +G   L  V+
Sbjct: 387 TAISQGLQHNDTLKVLRVASNPLGGEGPLELLNVI 421



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 36/270 (13%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           +E  +  + +G  G +A+   L + K K+  +++  N I A+G+ ++A+ +KN   +  +
Sbjct: 176 KEFSMKYHGLGPNGAKAIAWPLKTNK-KIEKINLEGNWIEAEGSIYLAKMLKNNIYVTEL 234

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG+EGAE I+D L++N  I ++DL GN+I   GA  + RVL  NS I  L LA 
Sbjct: 235 HLAENRIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLAN 294

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N      A  L EVL  +  + T+ L W  +   GA  +A+ ++ N  + IL+L  NG  
Sbjct: 295 NKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFA 354

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
            +                                G++ + ++ K  N  L  +DL+ N I
Sbjct: 355 QD--------------------------------GSEAMGKALK-NNRTLLELDLSHNRI 381

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            + GA AI+Q L+ N+ + V  L +A+N L
Sbjct: 382 PEAGATAISQGLQHNDTLKV--LRVASNPL 409



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 1/222 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    +++ G     EG  +LA+ L  N    E+  A N I   G +A   +LQ N  + 
Sbjct: 201 KKIEKINLEGNWIEAEGSIYLAKMLKNNIYVTELHLAENRIGNEGAEAISDMLQKNDMIY 260

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+LSGN I D G + LC +L+ N+ ++ L L++    +  A  + E+L NN  L  ++L
Sbjct: 261 SLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLANNKFEERAAGWLREVLTNNETLETVDL 320

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N +   G  ++AE + EN  +R L+L  N     G+ A+ K L+ N++L EL L  N 
Sbjct: 321 SWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFAQDGSEAMGKALKNNRTLLELDLSHNR 380

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           I + G  A+  GL      L VL + +N +  +G   +   I
Sbjct: 381 IPEAGATAISQGL-QHNDTLKVLRVASNPLGGEGPLELLNVI 421



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 3/256 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     G  G   +A  L  N+  E+++   N I A G      +L++NI +  L+L+ N
Sbjct: 180 MKYHGLGPNGAKAIAWPLKTNKKIEKINLEGNWIEAEGSIYLAKMLKNNIYVTELHLAEN 239

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+EG + + D+L  N  +  L LS   + D GA+ +  +L  NS ++ L L NN  + 
Sbjct: 240 RIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLANNKFEE 299

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
                L E L  N T+ ++ L+ N+    GA A+A+G++ N  LR L+L  N    +G  
Sbjct: 300 RAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFAQDGSE 359

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L + +  L  LD+ +N I   GA  +++ +++  +L  + +  N +G EG  ++ 
Sbjct: 360 AMGKALKNNR-TLLELDLSHNRIPEAGATAISQGLQHNDTLKVLRVASNPLGGEGPLELL 418

Query: 409 DALKQN--RTITTIDL 422
           + + +N    I  +DL
Sbjct: 419 NVIAKNDMSEIRVLDL 434



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 19/260 (7%)

Query: 362 AVLDIGNNSISAKGAFHVAE--------YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           A  +I N+    K   H+ E        Y  N       ++  + +G  GA+ IA  LK 
Sbjct: 140 AKREIENDKTGEKKYLHMCEETGVIPASYFLNHIQEKEFSMKYHGLGPNGAKAIAWPLKT 199

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N+ I  I+L GN I ++G+  +A++LK+N  +T L LA N IG +GA+A+S++L+ +  I
Sbjct: 200 NKKIEKINLEGNWIEAEGSIYLAKMLKNNIYVTELHLAENRIGNEGAEAISDMLQKNDMI 259

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
            +L L    I   GAE +  +L  N++I  L L AN   +E  +G     +    + + +
Sbjct: 260 YSLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYL-ANNKFEERAAG-----WLREVLTNNE 313

Query: 534 HMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
            +    L  N+L  +GA  +A+  +  N  L  ++LA N    DG+ A+ +ALK N    
Sbjct: 314 TLETVDLSWNHLRTRGAIAIAEGVQ-ENYGLRILNLAMNGFAQDGSEAMGKALKNNR--T 370

Query: 592 VTSLNLANNFLTKFGQSALT 611
           +  L+L++N + + G +A++
Sbjct: 371 LLELDLSHNRIPEAGATAIS 390



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 29/202 (14%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+SG                            N I   G +    VL  N ++K L L
Sbjct: 261 SLDLSG----------------------------NSIEDYGAEKLCRVLLKNSSIKHLYL 292

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           + N   +     L ++L +N  +E + LS   LR  GA AIAE ++ N  LR+L L  N 
Sbjct: 293 ANNKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNG 352

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  ++ +AL  N T+  L L+ N     GA A+++GL+ N +L+ L +  N +G E
Sbjct: 353 FAQDGSEAMGKALKNNRTLLELDLSHNRIPEAGATAISQGLQHNDTLKVLRVASNPLGGE 412

Query: 346 GIRALMSGLSSRK-GKLAVLDI 366
           G   L++ ++     ++ VLD+
Sbjct: 413 GPLELLNVIAKNDMSEIRVLDL 434



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 5/157 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
              +VD+S  +    G   +AE +  N     ++ A NG    G +A    L++N  L  
Sbjct: 314 TLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFAQDGSEAMGKALKNNRTLLE 373

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI--LRVLE 280
           L+LS N I + G   +   L  N  ++ L+++S  L  EG   +  ++  N +  +RVL+
Sbjct: 374 LDLSHNRIPEAGATAISQGLQHNDTLKVLRVASNPLGGEGPLELLNVIAKNDMSEIRVLD 433

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L + ++    F  L ++ LE   I +++  GN  G +
Sbjct: 434 LTDVLV-TPAFKELQQS-LEKDRILTVYF-GNVVGEI 467


>gi|149759248|ref|XP_001488525.1| PREDICTED: ribonuclease inhibitor-like [Equus caballus]
          Length = 456

 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 4/311 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
            L    + + +   + +S    GD GL  L E L + Q   E++      +TAA      
Sbjct: 99  VLPSVLRSVHSLRELHLSDNPLGDVGLQLLCEGLLHPQCHLEKLQLEYCNLTAASCGPLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL++    K L +S N +G+ GV+ LC  L ++A  +E L+L +  L     K +  ++
Sbjct: 159 AVLRAKQDFKELTVSNNDMGEAGVRVLCQGLAESACQLETLKLENCGLTPANCKDLCGIV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGN 329
            + + LR L+L +N +   G   L   LL  +S +++L L      A G   L + L   
Sbjct: 219 ASKASLRELDLGSNKLGDVGIAELCPGLLSPSSQLKTLWLWECDITAGGCRDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           ++L+EL L GN++GDEG + L   L   + +L  L + + S++A    H +  +   + L
Sbjct: 279 ENLKELSLAGNALGDEGAQLLCESLLEPRCQLESLWVKSCSLTAACCHHFSTMLTQNRHL 338

Query: 390 LWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L + +  N +GD G +++   L Q   T+  + LG  ++ + G S++A +L  N  +  L
Sbjct: 339 LELQMSSNKLGDSGVQELCQGLGQPGSTLRVLWLGDCDVSNSGCSSLASLLLANRSLREL 398

Query: 449 DLAYNPIGADG 459
           DL+ N +G  G
Sbjct: 399 DLSNNALGDPG 409



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 170/356 (47%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L       +++S     +T AG      VL+S  +L+
Sbjct: 52  SLTELSLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCCLTEAGCGVLPSVLRSVHSLR 111

Query: 222 TLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ LC+ +L     +E+LQL   +L       +A +L+     + L 
Sbjct: 112 ELHLSDNPLGDVGLQLLCEGLLHPQCHLEKLQLEYCNLTAASCGPLAAVLRAKQDFKELT 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G   L + L E++  + +L L            L   +    SLREL L  
Sbjct: 172 VSNNDMGEAGVRVLCQGLAESACQLETLKLENCGLTPANCKDLCGIVASKASLRELDLGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL S   +L  L +    I+A G   +   ++  ++L  ++L  N +
Sbjct: 232 NKLGDVGIAELCPGLLSPSSQLKTLWLWECDITAGGCRDLCRVLRAKENLKELSLAGNAL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++L + R  + ++ +   ++ +      + +L  N  +  L ++ N +G  
Sbjct: 292 GDEGAQLLCESLLEPRCQLESLWVKSCSLTAACCHHFSTMLTQNRHLLELQMSSNKLGDS 351

Query: 459 GAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G+ +  L LG C +  SG   +A +L  N ++  LDL  N L D
Sbjct: 352 GVQELCQGLGQPGSTLRVLWLGDCDVSNSGCSSLASLLLANRSLRELDLSNNALGD 407



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 169/381 (44%), Gaps = 10/381 (2%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLR 259
           G+T    +     LQ+N +L  L+L  N +GD GV   L  +      +++L L +  L 
Sbjct: 34  GLTEVRCRDISSALQANPSLTELSLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCCLT 93

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALG 318
           + G   +  +L++   LR L L++N +   G   L E LL     +  L L      A  
Sbjct: 94  EAGCGVLPSVLRSVHSLRELHLSDNPLGDVGLQLLCEGLLHPQCHLEKLQLEYCNLTAAS 153

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              LA  L   +  +EL +  N +G+ G+R L  GL+    +L  L + N  ++      
Sbjct: 154 CGPLAAVLRAKQDFKELTVSNNDMGEAGVRVLCQGLAESACQLETLKLENCGLTPANCKD 213

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           +   + +  SL  ++L  N +GD G AE     L  +  + T+ L   +I + G   + R
Sbjct: 214 LCGIVASKASLRELDLGSNKLGDVGIAELCPGLLSPSSQLKTLWLWECDITAGGCRDLCR 273

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           VL+    +  L LA N +G +GA+ L E +L+    + +L +  C + A+     + ML 
Sbjct: 274 VLRAKENLKELSLAGNALGDEGAQLLCESLLEPRCQLESLWVKSCSLTAACCHHFSTMLT 333

Query: 497 YNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
            N  +  L + +N L D  V   C GL    S +     +L+   C     G   LA S 
Sbjct: 334 QNRHLLELQMSSNKLGDSGVQELCQGLGQPGSTL----RVLWLGDCDVSNSGCSSLA-SL 388

Query: 556 KVVNEALTSIDLAFNEIRDDG 576
            + N +L  +DL+ N + D G
Sbjct: 389 LLANRSLRELDLSNNALGDPG 409



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 155/396 (39%), Gaps = 38/396 (9%)

Query: 242 LVDNAGVERLQ---LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
           L+    V RL    L+ V  RD     I+  L+ N  L  L L  N +  +G   + + L
Sbjct: 21  LIQQYAVVRLDDCGLTEVRCRD-----ISSALQANPSLTELSLRTNELGDAGVHLVLQGL 75

Query: 299 LENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
              +  I+ L L        G   L   L    SLRELHL  N +GD G++ L  GL   
Sbjct: 76  QSPTCKIQKLSLQNCCLTEAGCGVLPSVLRSVHSLRELHLSDNPLGDVGLQLLCEGLLHP 135

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT- 416
           +  L  L +   +++A     +A  ++  +    + +  ND+G+ G   +   L ++   
Sbjct: 136 QCHLEKLQLEYCNLTAASCGPLAAVLRAKQDFKELTVSNNDMGEAGVRVLCQGLAESACQ 195

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINT 475
           + T+ L    +       +  ++   + +  LDL  N +G  G   L   +L     + T
Sbjct: 196 LETLKLENCGLTPANCKDLCGIVASKASLRELDLGSNKLGDVGIAELCPGLLSPSSQLKT 255

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE----VCSG-----CNGLSF-- 524
           L L  C I A G   +  +LR    +  L L  N L DE    +C       C   S   
Sbjct: 256 LWLWECDITAGGCRDLCRVLRAKENLKELSLAGNALGDEGAQLLCESLLEPRCQLESLWV 315

Query: 525 ------------FHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
                       F + +   +H+L   +  N L   G + L Q        L  + L   
Sbjct: 316 KSCSLTAACCHHFSTMLTQNRHLLELQMSSNKLGDSGVQELCQGLGQPGSTLRVLWLGDC 375

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           ++ + G  ++A  L AN   ++  L+L+NN L   G
Sbjct: 376 DVSNSGCSSLASLLLANR--SLRELDLSNNALGDPG 409


>gi|297817654|ref|XP_002876710.1| RANGAP1 [Arabidopsis lyrata subsp. lyrata]
 gi|297322548|gb|EFH52969.1| RANGAP1 [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 44/415 (10%)

Query: 94  PAGVFVSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTG--KLF---R 148
           P G   SA  V  K   KL++    R  +  +E     V    ++    +G  + F    
Sbjct: 73  PDGDGTSAVQVYAKESSKLMLEVIKRGPQQESE---VEVSKDGDIFFDISGGSRAFIDEE 129

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG--YNQTAE-EVS-FAANGITA 204
           E++Q L   A+   +F+ +  S R+FG E   F A  L    +Q  E ++S F A    A
Sbjct: 130 EARQLLRPLARPHNSFTKIRFSNRSFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEA 189

Query: 205 AGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             ++    F   L+ +  L+ LNLS N +G++G++    ++     +E L L +  + ++
Sbjct: 190 EALEVMNMFSSALEGS-KLRYLNLSDNALGEKGIRAFASLIKSQNDLEELYLMNDGISED 248

Query: 262 GAKAIAELLKNNSILRVLELNNNM----------------------------IDYSGFTS 293
            A+A+ ELL +   +RVL+ +NNM                            I   G  +
Sbjct: 249 AARAVRELLPSTGKIRVLQFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVA 308

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAEAL   S ++ L L  N  G  G  ALAK L     L E+++   ++ DEG  AL   
Sbjct: 309 LAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEA 368

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L VL++  N I+ K A ++A  I + +SL  +NL  N++ DEG   IA A++ 
Sbjct: 369 LLKSAPSLEVLELAGNDITVKSAGNLAACIASKQSLSKLNLSENELKDEGTILIAKAVEG 428

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +  +  +DL  N I   GA A+A+ +        L++  N I  +G   ++++ K
Sbjct: 429 HDQLVEVDLSTNMIRRAGARALAQTVVKKHTFKLLNINGNFISEEGIDEVNDMFK 483



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 37/315 (11%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S +R L+L+ N  G  G  A A  ++    L EL+L  + I ++  RA+   L S  
Sbjct: 202 LEGSKLRYLNLSDNALGEKGIRAFASLIKSQNDLEELYLMNDGISEDAARAVRELLPS-T 260

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
           GK+ VL   NN    +GA  +AE +++C SL         IG EG   +A+AL+    + 
Sbjct: 261 GKIRVLQFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAEALEHCSHLK 320

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLK 477
            +DL  N    +G  A+A+ L   + +T + ++Y  +  +GA+ALSE +LK   ++  L+
Sbjct: 321 KLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLKSAPSLEVLE 380

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
           L    I    A  +A  +    ++S L+L  N L+DE                       
Sbjct: 381 LAGNDITVKSAGNLAACIASKQSLSKLNLSENELKDE----------------------- 417

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
                    G   +A++ +  ++ L  +DL+ N IR  GA A+AQ +       +  LN+
Sbjct: 418 ---------GTILIAKAVEG-HDQLVEVDLSTNMIRRAGARALAQTVVKKHTFKL--LNI 465

Query: 598 ANNFLTKFGQSALTD 612
             NF+++ G   + D
Sbjct: 466 NGNFISEEGIDEVND 480



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 151/309 (48%), Gaps = 40/309 (12%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+K LR L+L  N++G++GIRA  S + S +  L  L + N+ IS   A  V
Sbjct: 196 NMFSSALEGSK-LRYLNLSDNALGEKGIRAFASLIKS-QNDLEELYLMNDGISEDAARAV 253

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + +   +  +  + N  GDEGA  IA+ ++   ++         I S+G  A+A  L
Sbjct: 254 RELLPSTGKIRVLQFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAEAL 313

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-MLRYN 498
           +  S +  LDL  N  G +G  AL++ L    ++  + + +  +   GAE +++ +L+  
Sbjct: 314 EHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLKSA 373

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            ++ +L+L  N +   V S  N                           A C+A      
Sbjct: 374 PSLEVLELAGNDIT--VKSAGNL--------------------------AACIAS----- 400

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 618
            ++L+ ++L+ NE++D+G   IA+A++ ++   +  ++L+ N + + G  AL  A+ +V 
Sbjct: 401 KQSLSKLNLSENELKDEGTILIAKAVEGHDQ--LVEVDLSTNMIRRAGARAL--AQTVVK 456

Query: 619 EMSEKEVNI 627
           + + K +NI
Sbjct: 457 KHTFKLLNI 465



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 29/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE + +  + E+   ++  I + G  A    L+    LK L+L  N  G EG
Sbjct: 274 GDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEG 333

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTS 293
              L   L     +  + +S ++L DEGA+A++E LLK+   L VLEL  N I      +
Sbjct: 334 GIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLKSAPSLEVLELAGNDITVKSAGN 393

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           LA  +    ++  L+L+ N     G   +AK +EG+  L E                   
Sbjct: 394 LAACIASKQSLSKLNLSENELKDEGTILIAKAVEGHDQLVEVDLSTNMIRRAGARALAQT 453

Query: 335 ---------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
                    L+++GN I +EGI  +         KL  LD
Sbjct: 454 VVKKHTFKLLNINGNFISEEGIDEVNDMFKDSLDKLVPLD 493


>gi|83747318|ref|ZP_00944359.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
 gi|207739111|ref|YP_002257504.1| type III effector protein gala2 [Ralstonia solanacearum IPO1609]
 gi|83726018|gb|EAP73155.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
 gi|206592484|emb|CAQ59390.1| type III effector protein gala2 [Ralstonia solanacearum IPO1609]
          Length = 978

 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 216/473 (45%), Gaps = 98/473 (20%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LSG TG    E+   L   A+      S+D+SG   GD  +  LA S         ++ +
Sbjct: 581 LSGCTGSAVSEAG--LAVLAR--LPLESLDLSGTRIGDREVQALASSTSLTS----LNLS 632

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I  AG +A    L  N  L  LN+S NPIGD GV+ L D    +  +  L+L  + +
Sbjct: 633 GNRIGNAGAQA----LGRNTVLTALNVSANPIGDAGVQALAD----SRSLTSLELRGIGI 684

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            + G  A+A    +N++LR L++++N +       LA     N T+ SL  N     A G
Sbjct: 685 GEAGIAALA----SNTVLRSLDISSNDLSEQSAAELAR----NQTLASLKAN-----ACG 731

Query: 319 -ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
             N++A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +G  
Sbjct: 732 LTNSMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQGL- 785

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
                ++  ++L  +++     GD GA      L +NR +T++ LG N I S GA  +A 
Sbjct: 786 ---RPLELSRTLTSLDVSGIGCGDRGALL----LSKNRALTSLKLGFNGIGSAGAQGLAA 838

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
               N  + SLDL  N I  D AKAL+      G + +L +  C++    A  +A+ L  
Sbjct: 839 ----NRTLISLDLRGNTIDVDAAKALANT----GCLTSLNVSDCKLDDEAASALAESL-- 888

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV 557
             T++ LD+  N L     SG                           Q A+ LA     
Sbjct: 889 --TLTSLDVSVNRL-----SG---------------------------QAARALAG---- 910

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            N  LTS++++ N I  DGA A+A      E  ++TSL+   N + + G  AL
Sbjct: 911 -NATLTSLNISHNHIGPDGAQALA------ESPSLTSLDARANGIGEAGARAL 956



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 125/296 (42%), Gaps = 79/296 (26%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGDEGV 235
           EG F L +      T   +  +A      G K+F+ +   + + L++LN++G  IGD+G 
Sbjct: 114 EGNFTLQDLKALPATLRHLDLSA---CTGGAKSFEAIAYLAGLPLESLNVAGADIGDDG- 169

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
                                          A LL  N  LR L    N  +     + A
Sbjct: 170 -------------------------------ARLLAANPSLRAL----NAANGGIGAAGA 194

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL E+  + SL L  N  G  GA ALA     ++SL  L +    + D G RAL     
Sbjct: 195 RALAESPVLASLDLTRNGIGDEGARALAD----SRSLTNLAVLNCLVTDVGARALAG--- 247

Query: 356 SRKGKLAVLDIGN------------------NSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              G L  LD+GN                  N I+A+GA+ +A+     +SL  +++  N
Sbjct: 248 --NGTLTALDLGNLITETGNELEQAGYDRTANEITARGAWALAQN----RSLTSLSIQGN 301

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             GD G +    AL +NRT+T++++   ++    A+ +AR    N V+TSL + +N
Sbjct: 302 LCGDGGVQ----ALAKNRTLTSLNVAYTDMTPASATELAR----NPVLTSLSVRWN 349



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 42/193 (21%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G + GD+G   LA        A     A N        A    L  +  L +L
Sbjct: 155 LESLNVAGADIGDDGARLLA--------ANPSLRALNAANGGIGAAGARALAESPVLASL 206

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IGDEG + L D    +  +  L + +  + D GA+A+A     N  L  L+L N
Sbjct: 207 DLTRNGIGDEGARALAD----SRSLTNLAVLNCLVTDVGARALA----GNGTLTALDLGN 258

Query: 284 ------NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
                 N ++ +G+   A  +                 A GA ALA+    N+SL  L +
Sbjct: 259 LITETGNELEQAGYDRTANEIT----------------ARGAWALAQ----NRSLTSLSI 298

Query: 338 HGNSIGDEGIRAL 350
            GN  GD G++AL
Sbjct: 299 QGNLCGDGGVQAL 311


>gi|320165657|gb|EFW42556.1| hypothetical protein CAOG_07399 [Capsaspora owczarzaki ATCC 30864]
          Length = 362

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 119/218 (54%), Gaps = 6/218 (2%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L+ N I      ++AEAL  N+T+  L L+ N  G  G  A+A+ L+ N +L  L L GN
Sbjct: 14  LDGNRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNTTLTRLSLSGN 73

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IG  G +A+   L++    L VL +G N +   GA  +AE +K  K+L  ++L +N IG
Sbjct: 74  QIGYAGAQAM--ALTT----LTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIG 127

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             GA+ IA+ALK N T+T + L GN I   GA AIA  LK N+++  L L  N IG  GA
Sbjct: 128 TSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIGDVGA 187

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           + ++  L  +  +    L +  IG  G++ + +  + N
Sbjct: 188 QGIAAALMVNTTLKAFPLAYNCIGHLGSQAIDEARKRN 225



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 105/201 (52%), Gaps = 6/201 (2%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN  G +   A+A+ L+ N +L +L L  N IG  G +A+   L      L  L +  
Sbjct: 14  LDGNRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNT-TLTRLSLSG 72

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +A       +L  ++L  N +GD GA  IA+ALK N+T+T +DL  N I 
Sbjct: 73  NQIGYAGAQAMA-----LTTLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIG 127

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
           + GA AIA  LK N+ +T L L  N IG  GA A++E LK +  +  L L   QIG  GA
Sbjct: 128 TSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIGDVGA 187

Query: 489 EFVADMLRYNNTISILDLRAN 509
           + +A  L  N T+    L  N
Sbjct: 188 QGIAAALMVNTTLKAFPLAYN 208



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 10/244 (4%)

Query: 160 ELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           ELR+ +      + G   G+  +  +AE+L  N T  ++  + N I  AG KA    L+ 
Sbjct: 2   ELRSMTERQRELLDGNRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKV 61

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L+LSGN IG  G + +         +  L L +  L D GA AIAE LK N  L
Sbjct: 62  NTTLTRLSLSGNQIGYAGAQAMAL-----TTLTVLSLGANQLGDSGALAIAEALKANKTL 116

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L  N I  SG  ++AEAL  N+T+  L L+GN  G  GA A+A+ L+ N  L+ L 
Sbjct: 117 TALDLQLNQIGTSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLL 176

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLY 395
           L+ N IGD G + + + L      L    +  N I   G+  + E  K NC  L+ I   
Sbjct: 177 LYANQIGDVGAQGIAAALMVNT-TLKAFPLAYNCIGHLGSQAIDEARKRNCGCLVEIGDQ 235

Query: 396 MNDI 399
           +N +
Sbjct: 236 INPL 239



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 115/224 (51%), Gaps = 11/224 (4%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           REL L GN IG+  ++A+   L      L  L++ +N I   G   +AE +K   +L  +
Sbjct: 11  REL-LDGNRIGNVEVQAIAEALKVNT-TLTQLELSDNQIGHAGTKAIAEALKVNTTLTRL 68

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG  GA+ +A       T+T + LG N +   GA AIA  LK N  +T+LDL  
Sbjct: 69  SLSGNQIGYAGAQAMALT-----TLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQL 123

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+A++E LK +  +  L L   QIG +GA  +A+ L+ N  +  L L AN + 
Sbjct: 124 NQIGTSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIG 183

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
           D    G  G++       +LK       CI +L G++ + ++ K
Sbjct: 184 D---VGAQGIAAALMVNTTLKAFPLAYNCIGHL-GSQAIDEARK 223



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 116/222 (52%), Gaps = 15/222 (6%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           IGN  + A     +AE +K   +L  + L  N IG  G + IA+ALK N T+T + L GN
Sbjct: 19  IGNVEVQA-----IAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNTTLTRLSLSGN 73

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA A+A      + +T L L  N +G  GA A++E LK +  +  L L   QIG 
Sbjct: 74  QIGYAGAQAMAL-----TTLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIGT 128

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
           SGA+ +A+ L+ N T++ L L  N + D   +G   ++        LK +L Y+  I  +
Sbjct: 129 SGAQAIAEALKVNTTVTYLGLDGNQIGD---AGALAIAEALKVNTMLKGLLLYANQIGDV 185

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            GA+ +A +  +VN  L +  LA+N I   G+ AI +A K N
Sbjct: 186 -GAQGIAAAL-MVNTTLKAFPLAYNCIGHLGSQAIDEARKRN 225



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 97/191 (50%), Gaps = 38/191 (19%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG+   + IA+ALK N T+T ++L  N I   G  AIA  LK N+ +T L L+ N IG
Sbjct: 17  NRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNTTLTRLSLSGNQIG 76

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             GA+A++        +  L LG  Q+G SGA  +A+ L+ N T++ LDL+ N +     
Sbjct: 77  YAGAQAMALT-----TLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQI----- 126

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
               G S                       GA+ +A++ KV N  +T + L  N+I D G
Sbjct: 127 ----GTS-----------------------GAQAIAEALKV-NTTVTYLGLDGNQIGDAG 158

Query: 577 AFAIAQALKAN 587
           A AIA+ALK N
Sbjct: 159 ALAIAEALKVN 169



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 91/192 (47%), Gaps = 40/192 (20%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L GN I +    AIA  LK N+ +T L+L+ N IG  G KA++E LK +  +  L L   
Sbjct: 14  LDGNRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNTTLTRLSLSGN 73

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           QIG +GA+ +A       T+++L L AN L D                            
Sbjct: 74  QIGYAGAQAMAL-----TTLTVLSLGANQLGDS--------------------------- 101

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                GA  +A++ K  N+ LT++DL  N+I   GA AIA+ALK N    VT L L  N 
Sbjct: 102 -----GALAIAEALKA-NKTLTALDLQLNQIGTSGAQAIAEALKVN--TTVTYLGLDGNQ 153

Query: 602 LTKFGQSALTDA 613
           +   G  A+ +A
Sbjct: 154 IGDAGALAIAEA 165



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%)

Query: 158 AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSN 217
           A  L   + + +     GD G   +AE+L  N+T   +    N I  +G +A    L+ N
Sbjct: 82  AMALTTLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIGTSGAQAIAEALKVN 141

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
             +  L L GN IGD G   + + L  N  ++ L L +  + D GA+ IA  L  N+ L+
Sbjct: 142 TTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIGDVGAQGIAAALMVNTTLK 201

Query: 278 VLELNNNMIDYSGFTSLAEA 297
              L  N I + G  ++ EA
Sbjct: 202 AFPLAYNCIGHLGSQAIDEA 221


>gi|196007250|ref|XP_002113491.1| hypothetical protein TRIADDRAFT_57724 [Trichoplax adhaerens]
 gi|190583895|gb|EDV23965.1| hypothetical protein TRIADDRAFT_57724 [Trichoplax adhaerens]
          Length = 403

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 151/290 (52%), Gaps = 5/290 (1%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + D+    +C  +  N  V  L L+  ++ DEGAK I +LL+N+  LR+L L+   I  +
Sbjct: 79  LDDDDANMICRTMKVNFHVATLNLAYNNISDEGAKCIGKLLENHP-LRLLNLSYCDIGPA 137

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A+ +    T+  L L+GN   + G  A+A  L+ N S++EL+L    +  E + A
Sbjct: 138 GGEYIAKGIQMTETLTVLDLSGNKLKSKGVLAIAGALQVNLSVKELYLANTDMKTECVVA 197

Query: 350 LMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           + + L  +   + +L+I      S   +   H+A  +K   SL  ++L  +DI D GAE+
Sbjct: 198 IATVLR-QNNIVQILNIDRPLLFSQQEETTVHIANMLKVNSSLRKLHLSKHDIRDFGAER 256

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + +AL  N  +  +DL  N I   GA  I+++L  N+ +  L+L +N I +DGA  LS V
Sbjct: 257 LVEALIYNTALEELDLSCNRITRDGAGHISKLLLQNTPLKHLNLDFNRIESDGAIHLSRV 316

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           L F+ ++ +L +    I  SG   +AD L  N T+  L +  N L +  C
Sbjct: 317 LSFNTHLQSLHIASNCISGSGLCAIADSLSKNQTLMGLYVWGNNLENSAC 366



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 147/306 (48%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           ++++++  N  DEG   + + L  N     ++ +   I  AG +     +Q    L  L+
Sbjct: 98  ATLNLAYNNISDEGAKCIGKLLE-NHPLRLLNLSYCDIGPAGGEYIAKGIQMTETLTVLD 156

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LSGN +  +GV  +   L  N  V+ L L++ D++ E   AIA +L+ N+I+++L ++  
Sbjct: 157 LSGNKLKSKGVLAIAGALQVNLSVKELYLANTDMKTECVVAIATVLRQNNIVQILNIDRP 216

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++          +A  L  NS++R LHL+ +     GA  L + L  N +L EL L  N 
Sbjct: 217 LLFSQQEETTVHIANMLKVNSSLRKLHLSKHDIRDFGAERLVEALIYNTALEELDLSCNR 276

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I  +G    +S L  +   L  L++  N I + GA H++  +     L  +++  N I  
Sbjct: 277 ITRDG-AGHISKLLLQNTPLKHLNLDFNRIESDGAIHLSRVLSFNTHLQSLHIASNCISG 335

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA-YNPIGADGA 460
            G   IAD+L +N+T+  + + GNN+ +    A   +++D+      +     P   DG 
Sbjct: 336 SGLCAIADSLSKNQTLMGLYVWGNNLENSACVAFQELMEDDPPRLKEEFTDVKPYVVDGI 395

Query: 461 KALSEV 466
             L+E+
Sbjct: 396 VYLAEL 401



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 129/258 (50%), Gaps = 15/258 (5%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +A L++  N+IS +GA  + + ++N   L  +NL   DIG  G E IA  ++   T+T +
Sbjct: 97  VATLNLAYNNISDEGAKCIGKLLEN-HPLRLLNLSYCDIGPAGGEYIAKGIQMTETLTVL 155

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           DL GN + SKG  AIA  L+ N  +  L LA   +  +   A++ VL+ +  +  L +  
Sbjct: 156 DLSGNKLKSKGVLAIAGALQVNLSVKELYLANTDMKTECVVAIATVLRQNNIVQILNIDR 215

Query: 481 CQIGASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
             + +   E    +A+ML+ N+++  L L  + +RD           +++A+  L     
Sbjct: 216 PLLFSQQEETTVHIANMLKVNSSLRKLHLSKHDIRDFGAERLVEALIYNTALEEL----- 270

Query: 538 YSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
             L  N +   GA  +++   + N  L  ++L FN I  DGA  +++ L  N    + SL
Sbjct: 271 -DLSCNRITRDGAGHISKLL-LQNTPLKHLNLDFNRIESDGAIHLSRVLSFN--THLQSL 326

Query: 596 NLANNFLTKFGQSALTDA 613
           ++A+N ++  G  A+ D+
Sbjct: 327 HIASNCISGSGLCAIADS 344



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 4/163 (2%)

Query: 146 LFRESKQTLNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           LF + ++T    A  L+  SS+    +S  +  D G   L E+L YN   EE+  + N I
Sbjct: 218 LFSQQEETTVHIANMLKVNSSLRKLHLSKHDIRDFGAERLVEALIYNTALEELDLSCNRI 277

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T  G      +L  N  LK LNL  N I  +G   L  +L  N  ++ L ++S  +   G
Sbjct: 278 TRDGAGHISKLLLQNTPLKHLNLDFNRIESDGAIHLSRVLSFNTHLQSLHIASNCISGSG 337

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             AIA+ L  N  L  L +  N ++ S   +  E L+E+   R
Sbjct: 338 LCAIADSLSKNQTLMGLYVWGNNLENSACVAFQE-LMEDDPPR 379


>gi|320168103|gb|EFW45002.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 682

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 115/204 (56%), Gaps = 1/204 (0%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+T+  L L GN    +GA A+A+ +  N +L  + L  N IGD G RA    L      
Sbjct: 47  NTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLAENRIGDAGARAFAETLKV-NNT 105

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  LD+  N I   GA  +AE +K  K+L  + L+ N IG  GA+ IADALK N T+T +
Sbjct: 106 LTKLDLNENQIGDAGAQAIAEALKVNKTLTRLGLWHNQIGAAGAQAIADALKVNTTLTEL 165

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N I   GA AIA  L+ N+ +T L L  N I   GA+AL++ LK +  +  L+LG 
Sbjct: 166 YLYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALADALKANTTVTKLELGE 225

Query: 481 CQIGASGAEFVADMLRYNNTISIL 504
            QIG +GA  +A+ L+ N T+++L
Sbjct: 226 NQIGDAGARAIAEALKVNETLTML 249



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 1/185 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++ EL L GN I D G RA+   + +    L V+D+  N I   GA   AE +K   +
Sbjct: 47  NTTMTELKLGGNLIADVGARAIAEAVRA-NCTLTVVDLAENRIGDAGARAFAETLKVNNT 105

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  ++L  N IGD GA+ IA+ALK N+T+T + L  N I + GA AIA  LK N+ +T L
Sbjct: 106 LTKLDLNENQIGDAGAQAIAEALKVNKTLTRLGLWHNQIGAAGAQAIADALKVNTTLTEL 165

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L  N IG DGA+A++E L+ +  +  L L   QI  +GA+ +AD L+ N T++ L+L  
Sbjct: 166 YLYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALADALKANTTVTKLELGE 225

Query: 509 NGLRD 513
           N + D
Sbjct: 226 NQIGD 230



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 8/214 (3%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N I D GA  IA+A++ N T+T +DL  N I   GA A A  LK N+ +T LDL  N IG
Sbjct: 58  NLIADVGARAIAEAVRANCTLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIG 117

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             GA+A++E LK +  +  L L   QIGA+GA+ +AD L+ N T++ L L  N + D+  
Sbjct: 118 DAGAQAIAEALKVNKTLTRLGLWHNQIGAAGAQAIADALKVNTTLTELYLYQNKIGDD-- 175

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
            G   ++       +L  +  +   I    GA+ LA + K  N  +T ++L  N+I D G
Sbjct: 176 -GAQAIAEALEVNTTLTKLYLWENQIT-CTGAQALADALK-ANTTVTKLELGENQIGDAG 232

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           A AIA+ALK NE +   ++ L NNFLT  G +A 
Sbjct: 233 ARAIAEALKVNETL---TMLLNNNFLTTDGIAAF 263



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 144/302 (47%), Gaps = 35/302 (11%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E +Q L +  K+  A   +D+  +  G+     +AE++  N T  E+    N I   G +
Sbjct: 9   EKQQKLFDTVKD--ASQQLDLCKKQIGNAEAKAIAEAIKVNTTMTELKLGGNLIADVGAR 66

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    +++N  L  ++L+ N IGD G +   + L  N  + +L L+   + D GA+AIAE
Sbjct: 67  AIAEAVRANCTLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDAGAQAIAE 126

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  L  L L +N I  +G  ++A+AL  N+T+  L+L  N  G  GA A+A+ LE 
Sbjct: 127 ALKVNKTLTRLGLWHNQIGAAGAQAIADALKVNTTLTELYLYQNKIGDDGAQAIAEALEV 186

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L +L+L  N I   G +AL   L +    +  L++G N                   
Sbjct: 187 NTTLTKLYLWENQITCTGAQALADALKANT-TVTKLELGENQ------------------ 227

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
                     IGD GA  IA+ALK N T+T + L  N + + G   IA   +  + I  L
Sbjct: 228 ----------IGDAGARAIAEALKVNETLTML-LNNNFLTTDG---IAAFRQTGNAICDL 273

Query: 449 DL 450
           DL
Sbjct: 274 DL 275


>gi|395517504|ref|XP_003762916.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Sarcophilus harrisii]
          Length = 498

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 135/264 (51%), Gaps = 1/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S + +  R  G +G   LA +L  N +   ++ + N +   G  A  G+L+ N  +  L+
Sbjct: 208 SELMLKHRGLGPQGAQALALALMNNTSIVRLNLSDNWLNEEGTVAIAGMLKENCFIADLD 267

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N +G +G K LC  L++N  V RL+LS  DL     K +A+ L  N+ + +L+L++N
Sbjct: 268 LSDNKVGVKGAKALCAALMENTSVRRLRLSGSDLGTHATKDVADALMVNTKMELLDLSHN 327

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++D      L  AL EN  I+ L+L+ N+    GA   A+G+  N  LR L L  N  GD
Sbjct: 328 LLDEEAGERLGPALAENIGIKELNLSWNHLRGSGAVIFARGIGLNTYLRVLDLSYNGFGD 387

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           EG  A+   L    G L  L++ NN IS  GA   +E +   ++L  +++  N +  EG 
Sbjct: 388 EGAAAMGEALRV-NGVLEELNMNNNRISLPGALRFSEGLSENRTLRSLSMGRNPMRSEGC 446

Query: 405 EKIADALKQNRTITTIDLGGNNIH 428
             I  A++ N     + L  ++IH
Sbjct: 447 LSILRAVQMNPYSGLMVLDFSDIH 470



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 9/209 (4%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G +GA+ +A AL  N +I  ++L  N ++ +G  AIA +LK+N  I  LDL+ N +G  
Sbjct: 217 LGPQGAQALALALMNNTSIVRLNLSDNWLNEEGTVAIAGMLKENCFIADLDLSDNKVGVK 276

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GAKAL   L  + ++  L+L    +G    + VAD L  N  + +LDL  N L +E    
Sbjct: 277 GAKALCAALMENTSVRRLRLSGSDLGTHATKDVADALMVNTKMELLDLSHNLLDEEAGER 336

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAFNEIRDDGA 577
                  +  I  L      +L  N+L+G+  +  +  + +N  L  +DL++N   D+GA
Sbjct: 337 LGPALAENIGIKEL------NLSWNHLRGSGAVIFARGIGLNTYLRVLDLSYNGFGDEGA 390

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFG 606
            A+ +AL+ N    +  LN+ NN ++  G
Sbjct: 391 AAMGEALRVNG--VLEELNMNNNRISLPG 417



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 21/293 (7%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L    +G +G +AL   L +    +  L++ +N ++ +G   +A  +K    +  ++
Sbjct: 209 ELMLKHRGLGPQGAQALALALMNNT-SIVRLNLSDNWLNEEGTVAIAGMLKENCFIADLD 267

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G +GA+ +  AL +N ++  + L G+++ +     +A  L  N+ +  LDL++N
Sbjct: 268 LSDNKVGVKGAKALCAALMENTSVRRLRLSGSDLGTHATKDVADALMVNTKMELLDLSHN 327

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +  +  + L   L  +  I  L L W  +  SGA   A  +  N  + +LDL  NG  D
Sbjct: 328 LLDEEAGERLGPALAENIGIKELNLSWNHLRGSGAVIFARGIGLNTYLRVLDLSYNGFGD 387

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCIN----YLQGAKCLAQSFKVVNEALTSIDLAF 569
           E      G +    A+    + +   L +N     L GA   ++     N  L S+ +  
Sbjct: 388 E------GAAAMGEALRV--NGVLEELNMNNNRISLPGALRFSEGLS-ENRTLRSLSMGR 438

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 622
           N +R +G  +I +A++ N    +  L+ ++  L K       D +DL   M E
Sbjct: 439 NPMRSEGCLSILRAVQMNPYSGLMVLDFSDIHLNK-------DFEDLACSMKE 484


>gi|449502148|ref|XP_002198394.2| PREDICTED: ribonuclease inhibitor [Taeniopygia guttata]
          Length = 741

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/496 (23%), Positives = 211/496 (42%), Gaps = 23/496 (4%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAAN 200
           +   L   S + L+         + + +   N  D G+  L ++L   ++  +E+     
Sbjct: 259 WDCDLTSASCKDLSRLISTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWVREC 318

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLR 259
           G+T A  KA    L +N  LK L++  N +GD GV+ LC+ ++  N  ++ L L + +L 
Sbjct: 319 GLTTACCKAVSSALSTNKHLKVLHIGENKLGDAGVELLCEGLMHPNCNIQSLWLQNCNLT 378

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALG 318
               + +  +L     L  L + +N +  +G   L + ++  S  ++ L L      A  
Sbjct: 379 SACCETLRSVLSAQPSLTELHVGDNRLGTAGVKVLCQGMMNPSCKLQKLQLEYCELTADI 438

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             AL   L+   +L+EL L  N++GD  ++ L  GL      L +L + N  I++     
Sbjct: 439 VEALNAALQSKPTLKELSLSNNTLGDTAVKQLCQGLVEASCNLELLHLENCGITSDSCME 498

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           ++  ++N  SL+ +++  N IGD G   +   L      I  + L   ++ S     ++R
Sbjct: 499 ISAVLRNKSSLMDLSVGDNKIGDSGLALLCQGLMHPSCKIQKLWLWDCDLTSASCKDLSR 558

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLR 496
           ++     +T + L  N +   G + L + LK     +  L +  C +  +  + V+  L 
Sbjct: 559 LISTKESLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWVRECGLTTACCKAVSSALS 618

Query: 497 YNNTISILDLRANGLRDEVCSG----CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA 552
            N  + +L +  N L D   +G    C GL   +  I SL    +   C +   G     
Sbjct: 619 TNKHLKVLHIGENKLGD---AGVELLCEGLMHPNCNIQSL----WLGNC-DLTAGCCATL 670

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            +     + LT +DL++N + D+G   I +ALK        S N+    L     S+  D
Sbjct: 671 ATAMATKQCLTELDLSYNPLEDEGIRKICEALKK------PSCNVQQLILYDILWSSEVD 724

Query: 613 AKDLVYEMSEKEVNIF 628
            +    E S+ EV I 
Sbjct: 725 DELRALEESKPEVKII 740



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 191/455 (41%), Gaps = 43/455 (9%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-I 241
           AE L   ++ + +      ++++  K    ++ +N  L  L L+ N +GD GV+ LC  +
Sbjct: 16  AELLTTMKSCKTIRLDDCNLSSSNCKDLSSIINTNPFLTELKLNNNELGDAGVEYLCKGL 75

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  +  +++L L + +L     + +  +L     L  L + +N +  +G   L + ++  
Sbjct: 76  LTPSCSLQKLWLQNCNLTSACCETLRSVLSAQPSLTELHVGDNRLGTAGVKVLCQGIMNP 135

Query: 302 ST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           S  ++ L L      A    AL   L+   +L+EL L  N++GD  ++ L  GL      
Sbjct: 136 SCKLQKLQLEYCELTADIVEALNAALQSKPTLKELSLSNNTLGDTAVKQLCQGLVEASCN 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG----------------- 403
           L +L + N  I+      ++  ++N  SL+ +++  N IGD G                 
Sbjct: 196 LELLHLENCGITRDSCMEISAVLRNKSSLMDLSVGDNKIGDSGLALLCQGLMHPSCKIQK 255

Query: 404 ------------AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDL 450
                        + ++  +    T+T I L  NN+   G   + + LKD  S +  L +
Sbjct: 256 LWLWDCDLTSASCKDLSRLISTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWV 315

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRAN 509
               +     KA+S  L  + ++  L +G  ++G +G E + + L + N  I  L L+  
Sbjct: 316 RECGLTTACCKAVSSALSTNKHLKVLHIGENKLGDAGVELLCEGLMHPNCNIQSLWLQNC 375

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDL 567
            L     + C  L    SA  SL  +       N L   G K L Q     +  L  + L
Sbjct: 376 NLTS---ACCETLRSVLSAQPSLTELHVGD---NRLGTAGVKVLCQGMMNPSCKLQKLQL 429

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            + E+  D   A+  AL++     +  L+L+NN L
Sbjct: 430 EYCELTADIVEALNAALQSKP--TLKELSLSNNTL 462


>gi|403305733|ref|XP_003945254.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease inhibitor [Saimiri
           boliviensis boliviensis]
          Length = 624

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 155/315 (49%), Gaps = 4/315 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + + +     GD G+  + ++L  +    +++SF +  +T AG     G L+S   L+
Sbjct: 305 ALTELSLRNNEVGDAGVRRVLQALQSSPCKIQKLSFQSCYLTVAGCGVLSGTLRSLPTLQ 364

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ LC+ L+D    +E+LQL    L   G + +A +L+     + L 
Sbjct: 365 ELHLSDNPMGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSSAGCEPLASVLRAKPDFKELT 424

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN ID +G  +L + L ++   + +L L      +     L   L    SL+EL L  
Sbjct: 425 VSNNDIDETGVRALCQGLKDSPCQLETLKLEKCGVTSDNCRDLCSILASKASLQELALGN 484

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL     +L  L I    ++AK    +   ++   SL  ++L  N++
Sbjct: 485 NKLGDVGITELCPGLLHPSSRLRTLWIWECGLTAKSCVDLCRVLRAKDSLKELSLAGNEL 544

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++ L+    + ++ +   ++ +   S  + VL  N  +  L ++ N +G  
Sbjct: 545 GDEGAQLLCESLLEPGCQLESLWVKSCSLTAACCSHFSSVLAKNKFLLELQISENRLGDA 604

Query: 459 GAKALSEVLKFHGNI 473
           G + L   L   G++
Sbjct: 605 GVQELCRGLGQPGSV 619



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 154/355 (43%), Gaps = 5/355 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L      + V     G++ A  +     LQ+N AL  L+L  N +GD GV+ +   L
Sbjct: 269 AELLPLLPRCQAVRLDDCGLSEAQCEDVGSALQANSALTELSLRNNEVGDAGVRRVLQAL 328

Query: 243 VDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
             +   +++L   S  L   G   ++  L++   L+ L L++N +  +G   L E LL+ 
Sbjct: 329 QSSPCKIQKLSFQSCYLTVAGCGVLSGTLRSLPTLQELHLSDNPMGDAGLQLLCEGLLDP 388

Query: 302 ST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      + G   LA  L      +EL +  N I + G+RAL  GL     +
Sbjct: 389 QCRLEKLQLEYCSLSSAGCEPLASVLRAKPDFKELTVSNNDIDETGVRALCQGLKDSPCQ 448

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITT 419
           L  L +    +++     +   + +  SL  + L  N +GD G  ++    L  +  + T
Sbjct: 449 LETLKLEKCGVTSDNCRDLCSILASKASLQELALGNNKLGDVGITELCPGLLHPSSRLRT 508

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    + +K    + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 509 LWIWECGLTAKSCVDLCRVLRAKDSLKELSLAGNELGDEGAQLLCESLLEPGCQLESLWV 568

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSL 532
             C + A+     + +L  N  +  L +  N L D  V   C GL    S + SL
Sbjct: 569 KSCSLTAACCSHFSSVLAKNKFLLELQISENRLGDAGVQELCRGLGQPGSVLRSL 623



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 16/266 (6%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L EL L  N +GD G+R ++  L S   K+  L   +  ++  G   ++  +++
Sbjct: 300 LQANSALTELSLRNNEVGDAGVRRVLQALQSSPCKIQKLSFQSCYLTVAGCGVLSGTLRS 359

Query: 386 CKSLLWINLYMNDIGDEGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
             +L  ++L  N +GD G + + + L   Q R +  + L   ++ S G   +A VL+   
Sbjct: 360 LPTLQELHLSDNPMGDAGLQLLCEGLLDPQCR-LEKLQLEYCSLSSAGCEPLASVLRAKP 418

Query: 444 VITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
               L ++ N I   G +AL + LK     + TLKL  C + +     +  +L    ++ 
Sbjct: 419 DFKELTVSNNDIDETGVRALCQGLKDSPCQLETLKLEKCGVTSDNCRDLCSILASKASLQ 478

Query: 503 ILDLRANGLRD----EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            L L  N L D    E+C G    S     ++  +  L    C++  +  +         
Sbjct: 479 ELALGNNKLGDVGITELCPGLLHPSSRLRTLWIWECGLTAKSCVDLCRVLR--------A 530

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQAL 584
            ++L  + LA NE+ D+GA  + ++L
Sbjct: 531 KDSLKELSLAGNELGDEGAQLLCESL 556


>gi|349934864|dbj|GAA29381.1| leucine-rich repeat-containing protein 34 [Clonorchis sinensis]
          Length = 421

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 151/292 (51%), Gaps = 8/292 (2%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + D+ +K +C  L+    +  L L    ++DEGA  IA  L ++ +L+ L L  N I   
Sbjct: 71  LEDQDIKPICTALLLKPCITMLDLRYNRIKDEGAAIIASFLTDDQLLQELNLAGNDITEI 130

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A AL  N  +  L + GN  G+ G   LA+ L+ N++L  + L G    D+ I +
Sbjct: 131 GAACIATALRTNKVLLVLKMTGNPIGSTGGLRLAQALQVNRTLEFIDL-GEC--DQTITS 187

Query: 350 LMS--GLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            ++   +  R   +  L++      ++  +   H+AE +    +L  ++L   D+ D GA
Sbjct: 188 CIAFATMLQRNKTIKSLNLNRQLLWTLQEEPTVHIAEMLCINSTLRELHLSKVDMRDFGA 247

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           +++ADAL++N T+  +D+  N I   GA A++RV+  N  +  LDLA+N I   GAKAL+
Sbjct: 248 KRLADALERNHTLELLDISANRIARDGAIALSRVVMANCSLVILDLAFNRIQCAGAKALA 307

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             L  +  +  L + +C++ + G   +A+ L  NNT++ + +  N   +  C
Sbjct: 308 TALITNTCLKVLAVQFCELKSPGLCALAESLITNNTLTNIYIWGNEHDESTC 359



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 4/286 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+      DEG   +A  L  +Q  +E++ A N IT  G       L++N  L  
Sbjct: 88  CITMLDLRYNRIKDEGAAIIASFLTDDQLLQELNLAGNDITEIGAACIATALRTNKVLLV 147

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GNPIG  G   L   L  N  +E + L   D       A A +L+ N  ++ L LN
Sbjct: 148 LKMTGNPIGSTGGLRLAQALQVNRTLEFIDLGECDQTITSCIAFATMLQRNKTIKSLNLN 207

Query: 283 NNM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +   +       +AE L  NST+R LHL+       GA  LA  LE N +L  L +  
Sbjct: 208 RQLLWTLQEEPTVHIAEMLCINSTLRELHLSKVDMRDFGAKRLADALERNHTLELLDISA 267

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  +G  AL S +      L +LD+  N I   GA  +A  +     L  + +   ++
Sbjct: 268 NRIARDGAIAL-SRVVMANCSLVILDLAFNRIQCAGAKALATALITNTCLKVLAVQFCEL 326

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              G   +A++L  N T+T I + GN        A + +L+   ++
Sbjct: 327 KSPGLCALAESLITNNTLTNIYIWGNEHDESTCIAYSNLLETGRLV 372



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 42/285 (14%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N I DEG  A+++   +    L  L++  N I+  GA  +A  ++  K LL + +
Sbjct: 92  LDLRYNRIKDEGA-AIIASFLTDDQLLQELNLAGNDITEIGAACIATALRTNKVLLVLKM 150

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN- 453
             N IG  G  ++A AL+ NRT+  IDLG  +       A A +L+ N  I SL+L    
Sbjct: 151 TGNPIGSTGGLRLAQALQVNRTLEFIDLGECDQTITSCIAFATMLQRNKTIKSLNLNRQL 210

Query: 454 --PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              +  +    ++E+L  +  +  L L    +   GA+ +AD L  N+T+ +LD+ AN +
Sbjct: 211 LWTLQEEPTVHIAEMLCINSTLRELHLSKVDMRDFGAKRLADALERNHTLELLDISANRI 270

Query: 512 -RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFN 570
            RD                                 GA  L++   + N +L  +DLAFN
Sbjct: 271 ARD---------------------------------GAIALSRVV-MANCSLVILDLAFN 296

Query: 571 EIRDDGAFAIAQALKAN---EDVAVTSLNLANNFLTKFGQSALTD 612
            I+  GA A+A AL  N   + +AV    L +  L    +S +T+
Sbjct: 297 RIQCAGAKALATALITNTCLKVLAVQFCELKSPGLCALAESLITN 341


>gi|390470959|ref|XP_003734396.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease inhibitor [Callithrix
           jacchus]
          Length = 460

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 169/357 (47%), Gaps = 5/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
             + +++     GD G+  + ++L  +    +++SF    +T  G +   G L+S   L+
Sbjct: 56  VLTELNLRSNGLGDAGVHRILQALQSSSCKIQKLSFECCKLTVDGCRVLSGSLRSLPTLQ 115

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            LNL+ N + D G++ LC+ L+D    VE+LQL    L     + +A +L+     + L 
Sbjct: 116 ELNLTCNALKDAGLQLLCEGLLDPQCHVEKLQLEFCRLSSASCEPLASVLRAKPDFKELT 175

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           + NN  D +G   L + L E+   + +L L      +     L   L    SLREL L  
Sbjct: 176 VGNNDFDEAGIRVLCQGLKESPCQLETLKLERCGVTSDNCRDLCSILASKASLRELALGH 235

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N++GD GI  L  GL     +L  L I    ++AK    +   ++   SL  ++L  N +
Sbjct: 236 NNLGDMGIAELCPGLLHPSSRLRTLWIWECGLTAKSCEDLGRVLRAKDSLKELSLAGNKL 295

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++ L+    + ++ +    + +   S  + VL  N  +  L ++ N +G  
Sbjct: 296 GDEGAQVLCESLLEPGCQLESLWVKYCGLTAACCSHFSSVLAQNKFLLELQISENRLGDA 355

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           G + L + L   G++  +L LG C +   G   +A  L  N+++  LDL  N + DE
Sbjct: 356 GVQELCQGLGQPGSVMRSLWLGECDVTDVGCLSLAKTLLANDSLRELDLSNNCMGDE 412



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 176/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV-KCLCDI 241
           A+ L   Q    V      +T A  +     LQ+N  L  LNL  N +GD GV + L  +
Sbjct: 20  AKLLPLLQQCHTVRLDDCSLTEAHCEGISSALQANPVLTELNLRSNGLGDAGVHRILQAL 79

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L      L  +G + ++  L++   L+ L L  N +  +G   L E LL+ 
Sbjct: 80  QSSSCKIQKLSFECCKLTVDGCRVLSGSLRSLPTLQELNLTCNALKDAGLQLLCEGLLDP 139

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      +     LA  L      +EL +  N   + GIR L  GL     +
Sbjct: 140 QCHVEKLQLEFCRLSSASCEPLASVLRAKPDFKELTVGNNDFDEAGIRVLCQGLKESPCQ 199

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L +    +++     +   + +  SL  + L  N++GD G AE     L  +  + T
Sbjct: 200 LETLKLERCGVTSDNCRDLCSILASKASLRELALGHNNLGDMGIAELCPGLLHPSSRLRT 259

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    + +K    + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 260 LWIWECGLTAKSCEDLGRVLRAKDSLKELSLAGNKLGDEGAQVLCESLLEPGCQLESLWV 319

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
            +C + A+     + +L  N  +  L +  N L D  V   C GL    S + S    L+
Sbjct: 320 KYCGLTAACCSHFSSVLAQNKFLLELQISENRLGDAGVQELCQGLGQPGSVMRS----LW 375

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
              C     G   LA++  + N++L  +DL+ N + D+G   + ++L+
Sbjct: 376 LGECDVTDVGCLSLAKTL-LANDSLRELDLSNNCMGDEGIQMLLESLR 422



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 6/275 (2%)

Query: 145 KLFRESKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAAN 200
           +  R S  +    A  LRA   F  + +   +F + G+  L + L  +    E +     
Sbjct: 149 EFCRLSSASCEPLASVLRAKPDFKELTVGNNDFDEAGIRVLCQGLKESPCQLETLKLERC 208

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLR 259
           G+T+   +    +L S  +L+ L L  N +GD G+  LC  +L  ++ +  L +    L 
Sbjct: 209 GVTSDNCRDLCSILASKASLRELALGHNNLGDMGIAELCPGLLHPSSRLRTLWIWECGLT 268

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
            +  + +  +L+    L+ L L  N +   G   L E+LLE    + SL +      A  
Sbjct: 269 AKSCEDLGRVLRAKDSLKELSLAGNKLGDEGAQVLCESLLEPGCQLESLWVKYCGLTAAC 328

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +  +  L  NK L EL +  N +GD G++ L  GL      +  L +G   ++  G   
Sbjct: 329 CSHFSSVLAQNKFLLELQISENRLGDAGVQELCQGLGQPGSVMRSLWLGECDVTDVGCLS 388

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           +A+ +    SL  ++L  N +GDEG + + ++L+Q
Sbjct: 389 LAKTLLANDSLRELDLSNNCMGDEGIQMLLESLRQ 423



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 9/161 (5%)

Query: 150 SKQTLNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESL---GYNQTAEEVSFAANGIT 203
           + ++  +  + LRA  S+    ++G   GDEG   L ESL   G    +  V +   G+T
Sbjct: 268 TAKSCEDLGRVLRAKDSLKELSLAGNKLGDEGAQVLCESLLEPGCQLESLWVKYC--GLT 325

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEG 262
           AA    F  VL  N  L  L +S N +GD GV+ LC  L     V R L L   D+ D G
Sbjct: 326 AACCSHFSSVLAQNKFLLELQISENRLGDAGVQELCQGLGQPGSVMRSLWLGECDVTDVG 385

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
             ++A+ L  N  LR L+L+NN +   G   L E+L + S 
Sbjct: 386 CLSLAKTLLANDSLRELDLSNNCMGDEGIQMLLESLRQPSC 426


>gi|334327424|ref|XP_001377814.2| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Monodelphis domestica]
          Length = 518

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 132/250 (52%), Gaps = 1/250 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S + ++ R  G +G   LA +L  N +  +++ + N +   G  A  G+L+ N  +  L+
Sbjct: 61  SELTLTHRGLGSQGARALASALISNTSILKLNLSDNWLNDDGAVAIAGMLKENCFITDLD 120

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N +G +G K LC  L +NA + +L+LS  DL  + AK IA+ L  N+ + VL+L++N
Sbjct: 121 LSDNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEVLDLSHN 180

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++D      L  AL EN+ I+ L+L+ N+   +GA    +G+  N  LR L L  N  GD
Sbjct: 181 LLDEEAGEKLGPALAENAGIKELNLSWNHLRGMGAVIFTRGVGANTFLRVLDLSYNGFGD 240

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  AL   L      L  L+I NN IS  GA   +  ++  ++L  +++  N + +EG 
Sbjct: 241 PGAAALGEALKVNN-VLEELNISNNRISLPGAIRFSSGLRENQTLRILSMGRNPMRNEGC 299

Query: 405 EKIADALKQN 414
             I   ++ N
Sbjct: 300 LCILKVIQLN 309



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 31/267 (11%)

Query: 251 LQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           L L+   L  +GA+A+A  L+ N SIL+ L L++N ++  G  ++A  L EN  I  L L
Sbjct: 63  LTLTHRGLGSQGARALASALISNTSILK-LNLSDNWLNDDGAVAIAGMLKENCFITDLDL 121

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  GA GA AL   L+ N S+R+L L G+ +G +  + +   L     K+ VLD+ +N
Sbjct: 122 SDNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNT-KVEVLDLSHN 180

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +                             +E  EK+  AL +N  I  ++L  N++  
Sbjct: 181 LLD----------------------------EEAGEKLGPALAENAGIKELNLSWNHLRG 212

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA    R +  N+ +  LDL+YN  G  GA AL E LK +  +  L +   +I   GA 
Sbjct: 213 MGAVIFTRGVGANTFLRVLDLSYNGFGDPGAAALGEALKVNNVLEELNISNNRISLPGAI 272

Query: 490 FVADMLRYNNTISILDLRANGLRDEVC 516
             +  LR N T+ IL +  N +R+E C
Sbjct: 273 RFSSGLRENQTLRILSMGRNPMRNEGC 299



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 113/216 (52%), Gaps = 9/216 (4%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L    +G +GA  +A AL  N +I  ++L  N ++  GA AIA +LK+N  IT LDL+
Sbjct: 63  LTLTHRGLGSQGARALASALISNTSILKLNLSDNWLNDDGAVAIAGMLKENCFITDLDLS 122

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +GA GAKAL   LK + +I  L+L    +G   A+ +AD L  N  + +LDL  N L
Sbjct: 123 DNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEVLDLSHNLL 182

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAFN 570
            +E           ++ I  L      +L  N+L+G   +  +  V  N  L  +DL++N
Sbjct: 183 DEEAGEKLGPALAENAGIKEL------NLSWNHLRGMGAVIFTRGVGANTFLRVLDLSYN 236

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
              D GA A+ +ALK N    +  LN++NN ++  G
Sbjct: 237 GFGDPGAAALGEALKVNN--VLEELNISNNRISLPG 270



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 91/188 (48%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+S    G +G   L  +L  N +  ++  + + +     K     L  N  ++ L
Sbjct: 116 ITDLDLSDNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEVL 175

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N + +E  + L   L +NAG++ L LS   LR  GA      +  N+ LRVL+L+ 
Sbjct: 176 DLSHNLLDEEAGEKLGPALAENAGIKELNLSWNHLRGMGAVIFTRGVGANTFLRVLDLSY 235

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  +L EAL  N+ +  L+++ N     GA   + GL  N++LR L +  N + 
Sbjct: 236 NGFGDPGAAALGEALKVNNVLEELNISNNRISLPGAIRFSSGLRENQTLRILSMGRNPMR 295

Query: 344 DEGIRALM 351
           +EG   ++
Sbjct: 296 NEGCLCIL 303



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 73/168 (43%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  +  + L    KE  +   + +SG + G +    +A++L  N   E +  + N +  
Sbjct: 125 KLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEVLDLSHNLLDE 184

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              +     L  N  +K LNLS N +   G       +  N  +  L LS     D GA 
Sbjct: 185 EAGEKLGPALAENAGIKELNLSWNHLRGMGAVIFTRGVGANTFLRVLDLSYNGFGDPGAA 244

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           A+ E LK N++L  L ++NN I   G    +  L EN T+R L +  N
Sbjct: 245 ALGEALKVNNVLEELNISNNRISLPGAIRFSSGLRENQTLRILSMGRN 292



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 11/168 (6%)

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           + L L +  +G+ GA+AL+  L  + +I  L L    +   GA  +A ML+ N  I+ LD
Sbjct: 61  SELTLTHRGLGSQGARALASALISNTSILKLNLSDNWLNDDGAVAIAGMLKENCFITDLD 120

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALT 563
           L  N L      G  G     SA+     +    L  + L  Q AK +A +  +VN  + 
Sbjct: 121 LSDNKL------GAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADAL-LVNTKVE 173

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
            +DL+ N + ++    +  AL   E+  +  LNL+ N L   G    T
Sbjct: 174 VLDLSHNLLDEEAGEKLGPALA--ENAGIKELNLSWNHLRGMGAVIFT 219


>gi|308801903|ref|XP_003078265.1| unnamed protein product [Ostreococcus tauri]
 gi|116056716|emb|CAL53005.1| unnamed protein product [Ostreococcus tauri]
          Length = 481

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 162/322 (50%), Gaps = 19/322 (5%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL---VDNAGVE--RLQLSSV 256
           ++  G +A   VL     LK L L    + D+G   L + +    DN   +   L L S 
Sbjct: 102 VSNDGARAVAEVLAQGWDLKRLALRKVNVSDDGAVSLAEAIKTSADNGTCQLRWLDLGSN 161

Query: 257 DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
           D+R  GA AI E L++  + +  L L  N I   G  +L +    ++T+R + L  N  G
Sbjct: 162 DVRSRGAIAIGEALEHPEVRITRLTLRGNGICSEGMEALGKGAGTSATLRRIDLAHNGFG 221

Query: 316 ALG----ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
             G    A+AL++G   N  LR + L  NSIG +G+RALM  L      +  LD+G N +
Sbjct: 222 DRGVIAFADALSRGAAPN--LRVVLLGFNSIGPDGVRALMQALVGTN--VEHLDLGCNVV 277

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIG----DEGAEKIADALKQNRTITTIDLGGNNI 427
            A+G   +A+ I N   L  +NL  N+IG      G + ++ AL+ N T+  ++L GN +
Sbjct: 278 GAEGTKAIADMI-NSTRLKSVNLACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNAL 336

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           H+  A  IA  L + + +  L++ YN +  +GA  ++E L+ +G +  L L   +I   G
Sbjct: 337 HADCAKDIADFLLEETALIQLNVGYNELYDEGAWEIAEALEENGTVVGLDLQRNEITDEG 396

Query: 488 AEFVADMLRYNNTISILDLRAN 509
           A ++A  L  N  I  +DLR+N
Sbjct: 397 AGYIAKTLSVNEVIQEIDLRSN 418



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 154/303 (50%), Gaps = 13/303 (4%)

Query: 173 NFGDEGLFFLAESL---GYNQTAE--EVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLS 226
           N  D+G   LAE++     N T +   +   +N + + G  A    L+   + +  L L 
Sbjct: 129 NVSDDGAVSLAEAIKTSADNGTCQLRWLDLGSNDVRSRGAIAIGEALEHPEVRITRLTLR 188

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI--LRVLELNNN 284
           GN I  EG++ L      +A + R+ L+     D G  A A+ L   +   LRV+ L  N
Sbjct: 189 GNGICSEGMEALGKGAGTSATLRRIDLAHNGFGDRGVIAFADALSRGAAPNLRVVLLGFN 248

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  +L +AL+  + +  L L  N  GA G  A+A  +   + L+ ++L  N+IG 
Sbjct: 249 SIGPDGVRALMQALV-GTNVEHLDLGCNVVGAEGTKAIADMINSTR-LKSVNLACNNIGL 306

Query: 345 EGIRALMSGLS---SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            G R+ +  LS        L +L++  N++ A  A  +A+++    +L+ +N+  N++ D
Sbjct: 307 RGDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETALIQLNVGYNELYD 366

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA +IA+AL++N T+  +DL  N I  +GA  IA+ L  N VI  +DL  N IG DG +
Sbjct: 367 EGAWEIAEALEENGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEIDLRSNMIGPDGVE 426

Query: 462 ALS 464
            L+
Sbjct: 427 KLA 429



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 175/370 (47%), Gaps = 48/370 (12%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-----ILRVLELNNN 284
           + ++G + + ++L     ++RL L  V++ D+GA ++AE +K ++      LR L+L +N
Sbjct: 102 VSNDGARAVAEVLAQGWDLKRLALRKVNVSDDGAVSLAEAIKTSADNGTCQLRWLDLGSN 161

Query: 285 MIDYSGFTSLAEALLENSTIR--SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +   G  ++ EAL E+  +R   L L GN   + G  AL KG   + +LR + L  N  
Sbjct: 162 DVRSRGAIAIGEAL-EHPEVRITRLTLRGNGICSEGMEALGKGAGTSATLRRIDLAHNGF 220

Query: 343 GDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           GD G+ A    LS      L V+ +G NSI   G   + + +    ++  ++L  N +G 
Sbjct: 221 GDRGVIAFADALSRGAAPNLRVVLLGFNSIGPDGVRALMQALVGT-NVEHLDLGCNVVGA 279

Query: 402 EGAEKIADALKQNRTITTIDLGGNNI----HSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           EG + IAD +   R + +++L  NNI       G  A+++ L+ N+ +  L+L  N + A
Sbjct: 280 EGTKAIADMINSTR-LKSVNLACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNALHA 338

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
           D AK +++ L     +  L +G+ ++   GA  +A+ L  N T+  LDL+ N + DE   
Sbjct: 339 DCAKDIADFLLEETALIQLNVGYNELYDEGAWEIAEALEENGTVVGLDLQRNEITDE--- 395

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
                                        GA  +A++   VNE +  IDL  N I  DG 
Sbjct: 396 -----------------------------GAGYIAKTLS-VNEVIQEIDLRSNMIGPDGV 425

Query: 578 FAIAQALKAN 587
             +A +   N
Sbjct: 426 EKLASSSPRN 435



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 169/368 (45%), Gaps = 50/368 (13%)

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL---LENST--IRSLHL 309
           S+ + ++GA+A+AE+L     L+ L L    +   G  SLAEA+    +N T  +R L L
Sbjct: 99  SLRVSNDGARAVAEVLAQGWDLKRLALRKVNVSDDGAVSLAEAIKTSADNGTCQLRWLDL 158

Query: 310 NGNYGGALGANALAKGLEGNK-SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             N   + GA A+ + LE  +  +  L L GN I  EG+ AL                  
Sbjct: 159 GSNDVRSRGAIAIGEALEHPEVRITRLTLRGNGICSEGMEAL------------------ 200

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN--RTITTIDLGGNN 426
                KGA   A       +L  I+L  N  GD G    ADAL +     +  + LG N+
Sbjct: 201 ----GKGAGTSA-------TLRRIDLAHNGFGDRGVIAFADALSRGAAPNLRVVLLGFNS 249

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG-- 484
           I   G  A+ + L   +V   LDL  N +GA+G KA+++++     + ++ L    IG  
Sbjct: 250 IGPDGVRALMQALVGTNV-EHLDLGCNVVGAEGTKAIADMIN-STRLKSVNLACNNIGLR 307

Query: 485 --ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
              SG + ++  L  N T+ IL+LR N L  +            +A+  L ++ +  L  
Sbjct: 308 GDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETALIQL-NVGYNEL-- 364

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            Y +GA  +A++ +  N  +  +DL  NEI D+GA  IA+ L  NE   +  ++L +N +
Sbjct: 365 -YDEGAWEIAEALEE-NGTVVGLDLQRNEITDEGAGYIAKTLSVNE--VIQEIDLRSNMI 420

Query: 603 TKFGQSAL 610
              G   L
Sbjct: 421 GPDGVEKL 428



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 10/261 (3%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E+R  + + + G     EG+  L +  G + T   +  A NG    G+ AF   L    A
Sbjct: 179 EVR-ITRLTLRGNGICSEGMEALGKGAGTSATLRRIDLAHNGFGDRGVIAFADALSRGAA 237

Query: 220 --LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
             L+ + L  N IG +GV+ L   LV    VE L L    +  EG KAIA+++ N++ L+
Sbjct: 238 PNLRVVLLGFNSIGPDGVRALMQALV-GTNVEHLDLGCNVVGAEGTKAIADMI-NSTRLK 295

Query: 278 VLELNNNMI----DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            + L  N I    D SG  +L++AL  N+T+  L+L GN   A  A  +A  L    +L 
Sbjct: 296 SVNLACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETALI 355

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           +L++  N + DEG   +   L    G +  LD+  N I+ +GA ++A+ +   + +  I+
Sbjct: 356 QLNVGYNELYDEGAWEIAEALEE-NGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEID 414

Query: 394 LYMNDIGDEGAEKIADALKQN 414
           L  N IG +G EK+A +  +N
Sbjct: 415 LRSNMIGPDGVEKLASSSPRN 435



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 34/237 (14%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-------------GYNQ----- 190
           E  + L + A        +D++   FGD G+   A++L             G+N      
Sbjct: 195 EGMEALGKGAGTSATLRRIDLAHNGFGDRGVIAFADALSRGAAPNLRVVLLGFNSIGPDG 254

Query: 191 -----------TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG----DEGV 235
                        E +    N + A G KA   ++ S   LK++NL+ N IG      G+
Sbjct: 255 VRALMQALVGTNVEHLDLGCNVVGAEGTKAIADMINST-RLKSVNLACNNIGLRGDRSGL 313

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K L   L  N  +E L L    L  + AK IA+ L   + L  L +  N +   G   +A
Sbjct: 314 KALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETALIQLNVGYNELYDEGAWEIA 373

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           EAL EN T+  L L  N     GA  +AK L  N+ ++E+ L  N IG +G+  L S
Sbjct: 374 EALEENGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEIDLRSNMIGPDGVEKLAS 430



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 164 FSSVDMSGRNFG----DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
             SV+++  N G      GL  L+++L  N T E ++   N + A   K     L    A
Sbjct: 294 LKSVNLACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETA 353

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LN+  N + DEG   + + L +N  V  L L   ++ DEGA  IA+ L  N +++ +
Sbjct: 354 LIQLNVGYNELYDEGAWEIAEALEENGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEI 413

Query: 280 ELNNNMIDYSGFTSLAEALLENS 302
           +L +NMI   G   LA +   N+
Sbjct: 414 DLRSNMIGPDGVEKLASSSPRNT 436


>gi|320170054|gb|EFW46953.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 755

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 1/271 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    GD G   +  +L    T   +S   N I+  G  A    LQ++ AL  L +S
Sbjct: 48  LELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKISDIGAFAVAEGLQASTALTQLGMS 107

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + +  +L + A + RL LS   + D GA+AIAE L+ ++ L  L +  N I
Sbjct: 108 VNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAGARAIAEGLQTSTALTDLRMFENQI 167

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  ++  AL   + +  L+L+ N  G  GA A+A+GL+    L +  +  N IGD G
Sbjct: 168 GDDGAQAIGAALRTKANLSLLYLSQNKIGDAGARAIAEGLKTLTVLTDFRMFENQIGDAG 227

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +A+ + L + K  L+ L +  N I   GA  +AE ++   +L  + +  N IGD GA+ 
Sbjct: 228 AQAIGAALRN-KTNLSSLYLSENKIGDIGACAIAEGVQAASALTELGMSTNQIGDAGAQA 286

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           I  AL+    ++ ++L  N I S     +++
Sbjct: 287 IGAALRNKANLSKLNLWDNQISSSAVQLLSK 317



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 148/286 (51%), Gaps = 16/286 (5%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+GL+ N +L+ L L  N IGD G +A+ S L + K  L  L +  N IS  GAF VAE
Sbjct: 35  IAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRN-KSTLIALSLNENKISDIGAFAVAE 93

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++   +L  + + +N IGD GA  I   L+    +  + L  N I   GA AIA  L+ 
Sbjct: 94  GLQASTALTQLGMSVNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAGARAIAEGLQT 153

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           ++ +T L +  N IG DGA+A+   L+   N++ L L   +IG +GA  +A+ L+    +
Sbjct: 154 STALTDLRMFENQIGDDGAQAIGAALRTKANLSLLYLSQNKIGDAGARAIAEGLKTLTVL 213

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVN 559
           +   +  N + D       G     +A+ +  ++    L  N +   GA  +A+  +  +
Sbjct: 214 TDFRMFENQIGDA------GAQAIGAALRNKTNLSSLYLSENKIGDIGACAIAEGVQAAS 267

Query: 560 EALTSIDLAFNEIRDDGAFAIAQAL--KANEDVAVTSLNLANNFLT 603
            ALT + ++ N+I D GA AI  AL  KAN    ++ LNL +N ++
Sbjct: 268 -ALTELGMSTNQIGDAGAQAIGAALRNKAN----LSKLNLWDNQIS 308



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 31/337 (9%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  ++ ++ S V  SG    D     +AE L  N   + +  + N I  AG +A    L+
Sbjct: 11  ELFEKAKSSSRVIRSGITHDDA--LVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALR 68

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +   L  L+L+ N I D G   + + L  +  + +L +S   + D GA+AI  +L+N + 
Sbjct: 69  NKSTLIALSLNENKISDIGAFAVAEGLQASTALTQLGMSVNQIGDAGARAIGSVLRNKAN 128

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L L+ N I  +G  ++AE L  ++ +  L +  N  G  GA A+   L    +L  L
Sbjct: 129 LARLYLSQNKIGDAGARAIAEGLQTSTALTDLRMFENQIGDDGAQAIGAALRTKANLSLL 188

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N IGD G RA                             +AE +K    L    ++
Sbjct: 189 YLSQNKIGDAGARA-----------------------------IAEGLKTLTVLTDFRMF 219

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GA+ I  AL+    ++++ L  N I   GA AIA  ++  S +T L ++ N I
Sbjct: 220 ENQIGDAGAQAIGAALRNKTNLSSLYLSENKIGDIGACAIAEGVQAASALTELGMSTNQI 279

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           G  GA+A+   L+   N++ L L   QI +S  + ++
Sbjct: 280 GDAGAQAIGAALRNKANLSKLNLWDNQISSSAVQLLS 316



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 11/254 (4%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+   A  +AE +K   +L ++ L  N IGD GA+ I  AL+   T+  + L  N I   
Sbjct: 27  ITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKISDI 86

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A+A  L+ ++ +T L ++ N IG  GA+A+  VL+   N+  L L   +IG +GA  
Sbjct: 87  GAFAVAEGLQASTALTQLGMSVNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAGARA 146

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGA 548
           +A+ L+ +  ++ L +  N + D+      G     +A+ +  ++    L  N +   GA
Sbjct: 147 IAEGLQTSTALTDLRMFENQIGDD------GAQAIGAALRTKANLSLLYLSQNKIGDAGA 200

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
           + +A+  K +   LT   +  N+I D GA AI  AL+   +  ++SL L+ N +   G  
Sbjct: 201 RAIAEGLKTLT-VLTDFRMFENQIGDAGAQAIGAALRNKTN--LSSLYLSENKIGDIGAC 257

Query: 609 ALTDAKDLVYEMSE 622
           A+ +       ++E
Sbjct: 258 AIAEGVQAASALTE 271



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD G   +AE L       +     N I  AG +A    L++   L +L LS N
Sbjct: 190 LSQNKIGDAGARAIAEGLKTLTVLTDFRMFENQIGDAGAQAIGAALRNKTNLSSLYLSEN 249

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G   + + +   + +  L +S+  + D GA+AI   L+N + L  L L +N I  
Sbjct: 250 KIGDIGACAIAEGVQAASALTELGMSTNQIGDAGAQAIGAALRNKANLSKLNLWDNQISS 309

Query: 289 SGFTSLAEAL 298
           S    L++++
Sbjct: 310 SAVQLLSKSV 319


>gi|410974869|ref|XP_003993862.1| PREDICTED: ribonuclease inhibitor [Felis catus]
          Length = 456

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 158/321 (49%), Gaps = 4/321 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAF 210
           + L +  + L     + +S    GD GL  L + L   Q   E++      +TAA  +  
Sbjct: 98  EVLPDALRSLPTLRELQLSDNPLGDAGLQLLCKGLLDPQCHLEKLQLEYCNLTAASCEPL 157

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAEL 269
             VL++   +K L +S N IG+ GV+ LC  LVD+A  +E L+L +  L     K +  +
Sbjct: 158 AAVLRAWRHVKELVVSNNDIGEAGVQALCRGLVDSACQLETLKLENCGLTPASCKDLCGV 217

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEG 328
           + + + L+ L+L +N +   G  +L  ALL  S+ +R L L        G   L + L  
Sbjct: 218 VASKASLQELDLGDNKLGDQGIATLCPALLHPSSRLRVLWLWDCDITTTGCRDLCQVLRA 277

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            +SL+EL L GN++GDEG R L   L     +L  L + +  ++A    HV+  + + K 
Sbjct: 278 KESLKELSLAGNALGDEGARLLCESLLEPGCQLQSLWVKSCGLTAVCCPHVSAMLTHNKH 337

Query: 389 LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L+ + +  N +GD G +++   L Q +  +  + LG  ++ + G +++A +L  N  +  
Sbjct: 338 LVELQMSDNKLGDSGVQELCQGLSQPSAMLRVLWLGDCDVANGGCNSLASLLVVNRSLRE 397

Query: 448 LDLAYNPIGADGAKALSEVLK 468
           LDL+ N +   G   L E L+
Sbjct: 398 LDLSNNCMDDRGILQLMESLE 418



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 202/445 (45%), Gaps = 16/445 (3%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  + V     G+T    K     LQ+N +L  L+L  N + D GV+  L  + 
Sbjct: 17  ELLPLIQQYQVVRLDDCGLTEVRCKDICSALQANPSLTELSLCTNELHDAGVRLVLQGLQ 76

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
             +  +++L L +  L + G + + + L++   LR L+L++N +  +G   L + LL+  
Sbjct: 77  SPSCRIQKLSLRNCCLTNTGCEVLPDALRSLPTLRELQLSDNPLGDAGLQLLCKGLLDPQ 136

Query: 303 T-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  L L      A     LA  L   + ++EL +  N IG+ G++AL  GL     +L
Sbjct: 137 CHLEKLQLEYCNLTAASCEPLAAVLRAWRHVKELVVSNNDIGEAGVQALCRGLVDSACQL 196

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTI 420
             L + N  ++      +   + +  SL  ++L  N +GD+G   +  AL    + +  +
Sbjct: 197 ETLKLENCGLTPASCKDLCGVVASKASLQELDLGDNKLGDQGIATLCPALLHPSSRLRVL 256

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLG 479
            L   +I + G   + +VL+    +  L LA N +G +GA+ L E L   G  + +L + 
Sbjct: 257 WLWDCDITTTGCRDLCQVLRAKESLKELSLAGNALGDEGARLLCESLLEPGCQLQSLWVK 316

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
            C + A     V+ ML +N  +  L +  N L D   SG   L    S   ++  +L+  
Sbjct: 317 SCGLTAVCCPHVSAMLTHNKHLVELQMSDNKLGD---SGVQELCQGLSQPSAMLRVLWLG 373

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            C     G   LA S  VVN +L  +DL+ N + D G   + ++L+   D A+  L L +
Sbjct: 374 DCDVANGGCNSLA-SLLVVNRSLRELDLSNNCMDDRGILQLMESLE-RPDCALEQLVLYD 431

Query: 600 NFLTKFGQSALTDAKDLVYEMSEKE 624
            + T+         +DL+  + E++
Sbjct: 432 IYWTQ-------QTEDLLQALGERK 449



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 6/263 (2%)

Query: 157 FAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDG 212
            A  LRA+  V    +S  + G+ G+  L   L  +    E +     G+T A  K   G
Sbjct: 157 LAAVLRAWRHVKELVVSNNDIGEAGVQALCRGLVDSACQLETLKLENCGLTPASCKDLCG 216

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLK 271
           V+ S  +L+ L+L  N +GD+G+  LC  L+  +   R L L   D+   G + + ++L+
Sbjct: 217 VVASKASLQELDLGDNKLGDQGIATLCPALLHPSSRLRVLWLWDCDITTTGCRDLCQVLR 276

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
               L+ L L  N +   G   L E+LLE    ++SL +      A+    ++  L  NK
Sbjct: 277 AKESLKELSLAGNALGDEGARLLCESLLEPGCQLQSLWVKSCGLTAVCCPHVSAMLTHNK 336

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L EL +  N +GD G++ L  GLS     L VL +G+  ++  G   +A  +   +SL 
Sbjct: 337 HLVELQMSDNKLGDSGVQELCQGLSQPSAMLRVLWLGDCDVANGGCNSLASLLVVNRSLR 396

Query: 391 WINLYMNDIGDEGAEKIADALKQ 413
            ++L  N + D G  ++ ++L++
Sbjct: 397 ELDLSNNCMDDRGILQLMESLER 419


>gi|320165044|gb|EFW41943.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 214

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 114/224 (50%), Gaps = 29/224 (12%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG++                            GA+AIAE LK N+ L  ++L  N
Sbjct: 4   LHDNQIGED----------------------------GARAIAETLKVNTTLTKIKLWKN 35

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  +L+ AL  N T+  + LNGN  G  GA A+A+ L+ N +L  L LH N +GD
Sbjct: 36  QIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGD 95

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  A+   L   K  L  L + NN I   GA  +AE +K  K+L W+NL  N IGD GA
Sbjct: 96  AGATAIAEMLKVNK-MLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGA 154

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + IA+ALK N T+  + L  N I + GA AIA  LK N+ +  L
Sbjct: 155 QAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALKVNTTLIVL 198



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 116/201 (57%), Gaps = 3/201 (1%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + SLH   N  G  GA A+A+ L+ N +L ++ L  N IGD G  AL + L   K  L  
Sbjct: 1   MHSLH--DNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNK-TLIK 57

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+  N I   GA  +AE +K   +L  + L+ N +GD GA  IA+ LK N+ +T++ L 
Sbjct: 58  IDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLD 117

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I + GA AIA  LK N  +T L+L+ N IG  GA+A++E LK +  +  L L   +I
Sbjct: 118 NNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEI 177

Query: 484 GASGAEFVADMLRYNNTISIL 504
           G +GA+ +A+ L+ N T+ +L
Sbjct: 178 GNAGAQAIAEALKVNTTLIVL 198



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 116/225 (51%), Gaps = 33/225 (14%)

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N I   GA  +AE +K   +L  I L+ N IGD GA  ++ ALK N+T+  IDL GN I
Sbjct: 6   DNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQI 65

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              GA AIA  LK N+ + +L L  N +G  GA A++E+LK +  + +L L   QIG +G
Sbjct: 66  GDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAG 125

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG 547
           A  +A+ L+ N T++ L+L  N + D                                 G
Sbjct: 126 ALAIAEALKVNKTLTWLNLSENQIGDA--------------------------------G 153

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
           A+ +A++ K VN  L  + L  NEI + GA AIA+ALK N  + V
Sbjct: 154 AQAIAEALK-VNTTLPCLVLNENEIGNAGAQAIAEALKVNTTLIV 197



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 111/190 (58%), Gaps = 1/190 (0%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L++N I   G  ++AE L  N+T+  + L  N  G  GA+AL+  L+ NK+L ++ L+GN
Sbjct: 4   LHDNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGN 63

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G +A+   L      LA L + NN +   GA  +AE +K  K L  ++L  N IG
Sbjct: 64  QIGDAGAQAIAETLKVNT-TLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIG 122

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           + GA  IA+ALK N+T+T ++L  N I   GA AIA  LK N+ +  L L  N IG  GA
Sbjct: 123 NAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGA 182

Query: 461 KALSEVLKFH 470
           +A++E LK +
Sbjct: 183 QAIAEALKVN 192



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 1/173 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           LH N IG++G RA+   L      L  + +  N I   GA  ++  +K  K+L+ I+L  
Sbjct: 4   LHDNQIGEDGARAIAETLKVNT-TLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNG 62

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGD GA+ IA+ LK N T+  + L  N +   GA+AIA +LK N ++TSL L  N IG
Sbjct: 63  NQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIG 122

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
             GA A++E LK +  +  L L   QIG +GA+ +A+ L+ N T+  L L  N
Sbjct: 123 NAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNEN 175



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 101/181 (55%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G++G   +AE+L  N T  ++    N I  AG  A    L+ N  L  ++L+GN IGD 
Sbjct: 9   IGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDA 68

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  L L +  L D GA AIAE+LK N +L  L L+NN I  +G  +
Sbjct: 69  GAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALA 128

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N T+  L+L+ N  G  GA A+A+ L+ N +L  L L+ N IG+ G +A+   
Sbjct: 129 IAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEA 188

Query: 354 L 354
           L
Sbjct: 189 L 189



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 111/228 (48%), Gaps = 29/228 (12%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   N I   G +A    L+ N  L  + L  N IGD G   L   L  N  + ++ L+ 
Sbjct: 3   SLHDNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNG 62

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+AIAE LK N+ L  L L+NN +  +G T++AE L  N  + SL L+ N  G
Sbjct: 63  NQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIG 122

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA A+A+ L+ NK+L  L+L  N IGD G +A                          
Sbjct: 123 NAGALAIAEALKVNKTLTWLNLSENQIGDAGAQA-------------------------- 156

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
              +AE +K   +L  + L  N+IG+ GA+ IA+ALK N T+  +  G
Sbjct: 157 ---IAEALKVNTTLPCLVLNENEIGNAGAQAIAEALKVNTTLIVLLYG 201



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 35/220 (15%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L+ N IG++GA  IA+ LK N T+T I L  N I   GA A++  LK N  +  +DL  N
Sbjct: 4   LHDNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGN 63

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A++E LK +  +  L L   ++G +GA  +A+ML+ N  ++ L L  N + +
Sbjct: 64  QIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGN 123

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA  +A++ KV N+ LT ++L+ N+I 
Sbjct: 124 A--------------------------------GALAIAEALKV-NKTLTWLNLSENQIG 150

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D GA AIA+ALK N  +    LN   N +   G  A+ +A
Sbjct: 151 DAGAQAIAEALKVNTTLPCLVLN--ENEIGNAGAQAIAEA 188



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 86/169 (50%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +     GD G   L+ +L  N+T  ++    N I  AG +A    L+ N  L  L
Sbjct: 27  LTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANL 86

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N +GD G   + ++L  N  +  L L +  + + GA AIAE LK N  L  L L+ 
Sbjct: 87  GLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSE 146

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N I  +G  ++AEAL  N+T+  L LN N  G  GA A+A+ L+ N +L
Sbjct: 147 NQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALKVNTTL 195



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 63/128 (49%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +++ +     GD G   +AE L  N+    +S   N I  AG  A  
Sbjct: 71  QAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIA 130

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNLS N IGD G + + + L  N  +  L L+  ++ + GA+AIAE LK
Sbjct: 131 EALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALK 190

Query: 272 NNSILRVL 279
            N+ L VL
Sbjct: 191 VNTTLIVL 198


>gi|198431313|ref|XP_002120047.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
           intestinalis]
          Length = 661

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 152/291 (52%), Gaps = 4/291 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+F++VD+  ++    G+   +  + + Q  E ++ + +G+   G KA    L  N ++ 
Sbjct: 67  RSFTAVDIYFKSCEQLGVVPASYFVTHLQ-HEVMNMSHHGLGPNGTKAIAAPLVINTSIL 125

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN+  N I  EG++ + D+L++N  +  L +S   L  EGA+ + E+L+ N+ LR L +
Sbjct: 126 ELNIEDNWITAEGMRDIADMLMENCYISILNISHNKLGSEGARYVGEMLQENTTLRTLNI 185

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N    S     AEAL +N  ++ L ++GN    LG   + + +  N+++  L+L  N 
Sbjct: 186 SRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNH 245

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +  +G  A+ +G+ S    +  LD+  N  + +GA  + E +K   +L+W++L  N I D
Sbjct: 246 LRLKGALAVCAGMKS-NITVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISD 304

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDL 450
           +G   +A  L+ N T+ T+ +G N    +GA  +   +  N  S I  LDL
Sbjct: 305 KGLTMLAKGLEVNDTLRTLRIGDNPFGEEGALLLINAIFKNEKSAIEDLDL 355



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 3/265 (1%)

Query: 249 ERLQLSSVDLRDEGAKAIA-ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           E + +S   L   G KAIA  L+ N SIL  L + +N I   G   +A+ L+EN  I  L
Sbjct: 97  EVMNMSHHGLGPNGTKAIAAPLVINTSILE-LNIEDNWITAEGMRDIADMLMENCYISIL 155

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +++ N  G+ GA  + + L+ N +LR L++  N   D   +     L  +  +L  LDI 
Sbjct: 156 NISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALR-QNFRLKELDIS 214

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N     G   + + I   +++  +NL  N +  +GA  +   +K N T+ T+DL  N  
Sbjct: 215 GNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGF 274

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             +GA A+   LK N+ +  LDL++N I   G   L++ L+ +  + TL++G    G  G
Sbjct: 275 ADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEG 334

Query: 488 AEFVADMLRYNNTISILDLRANGLR 512
           A  + + +  N   +I DL    +R
Sbjct: 335 ALLLINAIFKNEKSAIEDLDLKSVR 359



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 34/283 (12%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  A+A  L  N S+ EL++  N I  EG+R +   L      +++L+I +N + ++
Sbjct: 107 GPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLME-NCYISILNISHNKLGSE 165

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA +V E ++   +L  +N+  ND  D   +  A+AL+QN  +  +D+ GN     G   
Sbjct: 166 GARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEW 225

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           + + +  N  I +L+L++N +   GA A+   +K +  + TL L W      GA  + + 
Sbjct: 226 MGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAMAMGEA 285

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L+ NNT+  LDL  N + D                                +G   LA+ 
Sbjct: 286 LKTNNTLVWLDLSFNRISD--------------------------------KGLTMLAKG 313

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
            + VN+ L ++ +  N   ++GA  +  A+  NE  A+  L+L
Sbjct: 314 LE-VNDTLRTLRIGDNPFGEEGALLLINAIFKNEKSAIEDLDL 355



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 2/228 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S +++S    G EG  ++ E L  N T   ++ + N    +  + F   L+ N  LK L
Sbjct: 152 ISILNISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKEL 211

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++SGN   + G + +   +  N  +E L LS   LR +GA A+   +K+N  ++ L+L+ 
Sbjct: 212 DISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSW 271

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  ++ EAL  N+T+  L L+ N     G   LAKGLE N +LR L +  N  G
Sbjct: 272 NGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFG 331

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF-HVAEYIKNCKSLL 390
           +EG   L++ +  +  K A+ D+   S+     F  +AE ++   S L
Sbjct: 332 EEGALLLINAI-FKNEKSAIEDLDLKSVRVNREFLELAEKLRGRTSSL 378



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 41/274 (14%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLWIN 393
           +++  + +G  G +A+ + L      L  L+I +N I+A+G   +A+ + +NC  +  +N
Sbjct: 99  MNMSHHGLGPNGTKAIAAPLVINTSILE-LNIEDNWITAEGMRDIADMLMENC-YISILN 156

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N +G EGA  + + L++N T+ T+++  N+         A  L+ N  +  LD++ N
Sbjct: 157 ISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGN 216

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + + + +  +  I TL L W  +   GA  V   ++ N T+  LDL  NG  D
Sbjct: 217 EFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFAD 276

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           E                                GA  + ++ K  N  L  +DL+FN I 
Sbjct: 277 E--------------------------------GAMAMGEALKT-NNTLVWLDLSFNRIS 303

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           D G   +A+ L+ N+   + +L + +N    FG+
Sbjct: 304 DKGLTMLAKGLEVND--TLRTLRIGDN---PFGE 332



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 88/175 (50%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  E  + + E  +E     ++++S  +F D    + AE+L  N   +E+  + N    
Sbjct: 161 KLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCE 220

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +     + +N A++TLNLS N +  +G   +C  +  N  V+ L LS     DEGA 
Sbjct: 221 LGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAM 280

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           A+ E LK N+ L  L+L+ N I   G T LA+ L  N T+R+L +  N  G  GA
Sbjct: 281 AMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEGA 335



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 133/271 (49%), Gaps = 20/271 (7%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I DEG  A  S           +DI   S    G    + ++ + +  + +N+  + +G 
Sbjct: 58  IEDEGRTAYRS--------FTAVDIYFKSCEQLGVVPASYFVTHLQHEV-MNMSHHGLGP 108

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G + IA  L  N +I  +++  N I ++G   IA +L +N  I+ L++++N +G++GA+
Sbjct: 109 NGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLMENCYISILNISHNKLGSEGAR 168

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
            + E+L+ +  + TL +       S  ++ A+ LR N  +  LD+  N    E C    G
Sbjct: 169 YVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGN----EFCEL--G 222

Query: 522 LSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             +   AI + + +   +L  N+L  +GA  +    K  N  + ++DL++N   D+GA A
Sbjct: 223 GEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKS-NITVKTLDLSWNGFADEGAMA 281

Query: 580 IAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           + +ALK N    +  L+L+ N ++  G + L
Sbjct: 282 MGEALKTNN--TLVWLDLSFNRISDKGLTML 310


>gi|344286332|ref|XP_003414913.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like
            [Loxodonta africana]
          Length = 1139

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 10/347 (2%)

Query: 176  DEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
            D G+  L E L   N    ++SF    I+ A   A   VL +N  L  L  S   +    
Sbjct: 747  DSGMKLLCEGLKQPNSVLHKLSFYRCLISPASCGALAAVLSTNQWLTELEFSETELEASA 806

Query: 235  VKCLCDILVD-NAGVERLQLSSVDLRDEG---AKAIAELLKNNSILRVLELNNNMIDYSG 290
            VK LC+ L D N  +++L+L +  L +      K +A +L  NS L  L+L+ N +  +G
Sbjct: 807  VKFLCEGLKDPNCKLQKLKLCASFLPESSEAVCKYLASVLMCNSNLTELDLSENPLGDTG 866

Query: 291  FTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
               L E L   N  +  L L+           L+  L+ N++L+EL +  N++GD G++ 
Sbjct: 867  VKYLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQMNQTLKELFVFANALGDTGVQH 926

Query: 350  LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
            L  GL   KG +  L +   S+SA     +A+ + + +SL  + L  N I D G + + +
Sbjct: 927  LCEGLRHAKGIVENLVLSECSLSATCCEPLAQVLSSTRSLTRLLLINNKIEDLGLKLLCE 986

Query: 410  ALKQNRTITTIDLGGNNIHSKGASA--IARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             LKQ       DL     H  GA    +   L  N  +  LDL+ N +G +G + L E L
Sbjct: 987  GLKQPHC-QLKDLALWTCHLTGACCQDLCNALYTNEHLRDLDLSDNALGDEGMQVLCEGL 1045

Query: 468  KFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            K     + TL L  C +       +A +L  N  +++LDL  N  RD
Sbjct: 1046 KHPCCKLQTLWLAECHLTDVCCGALASVLNRNENLTLLDLSGNDFRD 1092



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 169/381 (44%), Gaps = 15/381 (3%)

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLK 271
            V ++N  L  L    N + D G+K LC+ L   N+ + +L      +      A+A +L 
Sbjct: 728  VFETNQHLTDLEFVKNTLEDSGMKLLCEGLKQPNSVLHKLSFYRCLISPASCGALAAVLS 787

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNY---GGALGANALAKGLE 327
             N  L  LE +   ++ S    L E L + N  ++ L L  ++           LA  L 
Sbjct: 788  TNQWLTELEFSETELEASAVKFLCEGLKDPNCKLQKLKLCASFLPESSEAVCKYLASVLM 847

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             N +L EL L  N +GD G++ L  GL     K+  LD+   S++      ++ +++  +
Sbjct: 848  CNSNLTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQMNQ 907

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVIT 446
            +L  + ++ N +GD G + + + L+  + I   + L   ++ +     +A+VL     +T
Sbjct: 908  TLKELFVFANALGDTGVQHLCEGLRHAKGIVENLVLSECSLSATCCEPLAQVLSSTRSLT 967

Query: 447  SLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             L L  N I   G K L E LK  H  +  L L  C +  +  + + + L  N  +  LD
Sbjct: 968  RLLLINNKIEDLGLKLLCEGLKQPHCQLKDLALWTCHLTGACCQDLCNALYTNEHLRDLD 1027

Query: 506  LRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA-QSFKVVNEALT 563
            L  N L DE +   C GL      + +L    + + C  +L    C A  S    NE LT
Sbjct: 1028 LSDNALGDEGMQVLCEGLKHPCCKLQTL----WLAEC--HLTDVCCGALASVLNRNENLT 1081

Query: 564  SIDLAFNEIRDDGAFAIAQAL 584
             +DL+ N+ RD G   +  AL
Sbjct: 1082 LLDLSGNDFRDLGVQMLCDAL 1102



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 13/256 (5%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+S    GD G+ +L E L + N   E++  +   +T A        LQ N  LK 
Sbjct: 852  LTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQMNQTLKE 911

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L +  N +GD GV+ LC+ L    G VE L LS   L     + +A++L +   L  L L
Sbjct: 912  LFVFANALGDTGVQHLCEGLRHAKGIVENLVLSECSLSATCCEPLAQVLSSTRSLTRLLL 971

Query: 282  NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
             NN I+  G   L E L      L++  + + HL G          L   L  N+ LR+L
Sbjct: 972  INNKIEDLGLKLLCEGLKQPHCQLKDLALWTCHLTGA-----CCQDLCNALYTNEHLRDL 1026

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  N++GDEG++ L  GL     KL  L +    ++      +A  +   ++L  ++L 
Sbjct: 1027 DLSDNALGDEGMQVLCEGLKHPCCKLQTLWLAECHLTDVCCGALASVLNRNENLTLLDLS 1086

Query: 396  MNDIGDEGAEKIADAL 411
             ND  D G + + DAL
Sbjct: 1087 GNDFRDLGVQMLCDAL 1102



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLE 327
            + + N  L  LE   N ++ SG   L E L + NS +  L             ALA  L 
Sbjct: 728  VFETNQHLTDLEFVKNTLEDSGMKLLCEGLKQPNSVLHKLSFYRCLISPASCGALAAVLS 787

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN-- 385
             N+ L EL      +    ++ L  GL     KL  L +   S   + +  V +Y+ +  
Sbjct: 788  TNQWLTELEFSETELEASAVKFLCEGLKDPNCKLQKLKLCA-SFLPESSEAVCKYLASVL 846

Query: 386  -CKS-LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN 442
             C S L  ++L  N +GD G + + + L+  N  +  +DL   ++       ++  L+ N
Sbjct: 847  MCNSNLTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQMN 906

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              +  L +  N +G  G + L E L+   G +  L L  C + A+  E +A +L    ++
Sbjct: 907  QTLKELFVFANALGDTGVQHLCEGLRHAKGIVENLVLSECSLSATCCEPLAQVLSSTRSL 966

Query: 502  SILDLRANGLRD-EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--LAQSFKVV 558
            + L L  N + D  +   C GL   H  +  L      +L   +L GA C  L  +    
Sbjct: 967  TRLLLINNKIEDLGLKLLCEGLKQPHCQLKDL------ALWTCHLTGACCQDLCNAL-YT 1019

Query: 559  NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            NE L  +DL+ N + D+G   + + LK +    + +L LA   LT     AL
Sbjct: 1020 NEHLRDLDLSDNALGDEGMQVLCEGLK-HPCCKLQTLWLAECHLTDVCCGAL 1070



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+S    GDEG+  L E L +     + +  A   +T     A   VL  N  L  L+L
Sbjct: 1026 LDLSDNALGDEGMQVLCEGLKHPCCKLQTLWLAECHLTDVCCGALASVLNRNENLTLLDL 1085

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
            SGN   D GV+ LCD L+    + +LQ   +D
Sbjct: 1086 SGNDFRDLGVQMLCDALIH--PICKLQTFYID 1115


>gi|198431315|ref|XP_002120110.1| PREDICTED: similar to predicted protein isoform 2 [Ciona
           intestinalis]
          Length = 485

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 152/291 (52%), Gaps = 4/291 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+F++VD+  ++    G+   +  + + Q  E ++ + +G+   G KA    L  N ++ 
Sbjct: 67  RSFTAVDIYFKSCEQLGVVPASYFVTHLQ-HEVMNMSHHGLGPNGTKAIAAPLVINTSIL 125

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN+  N I  EG++ + D+L++N  +  L +S   L  EGA+ + E+L+ N+ LR L +
Sbjct: 126 ELNIEDNWITAEGMRDIADMLMENCYISILNISHNKLGSEGARYVGEMLQENTTLRTLNI 185

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N    S     AEAL +N  ++ L ++GN    LG   + + +  N+++  L+L  N 
Sbjct: 186 SRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNH 245

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +  +G  A+ +G+ S    +  LD+  N  + +GA  + E +K   +L+W++L  N I D
Sbjct: 246 LRLKGALAVCAGMKSNI-TVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISD 304

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDL 450
           +G   +A  L+ N T+ T+ +G N    +GA  +   +  N  S I  LDL
Sbjct: 305 KGLTMLAKGLEVNDTLRTLRIGDNPFGEEGALLLINAIFKNEKSAIEDLDL 355



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 3/265 (1%)

Query: 249 ERLQLSSVDLRDEGAKAIA-ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           E + +S   L   G KAIA  L+ N SIL  L + +N I   G   +A+ L+EN  I  L
Sbjct: 97  EVMNMSHHGLGPNGTKAIAAPLVINTSILE-LNIEDNWITAEGMRDIADMLMENCYISIL 155

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +++ N  G+ GA  + + L+ N +LR L++  N   D   +     L  +  +L  LDI 
Sbjct: 156 NISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALR-QNFRLKELDIS 214

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N     G   + + I   +++  +NL  N +  +GA  +   +K N T+ T+DL  N  
Sbjct: 215 GNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGF 274

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             +GA A+   LK N+ +  LDL++N I   G   L++ L+ +  + TL++G    G  G
Sbjct: 275 ADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEG 334

Query: 488 AEFVADMLRYNNTISILDLRANGLR 512
           A  + + +  N   +I DL    +R
Sbjct: 335 ALLLINAIFKNEKSAIEDLDLKSVR 359



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 34/283 (12%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  A+A  L  N S+ EL++  N I  EG+R +   L      +++L+I +N + ++
Sbjct: 107 GPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLM-ENCYISILNISHNKLGSE 165

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA +V E ++   +L  +N+  ND  D   +  A+AL+QN  +  +D+ GN     G   
Sbjct: 166 GARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEW 225

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           + + +  N  I +L+L++N +   GA A+   +K +  + TL L W      GA  + + 
Sbjct: 226 MGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAMAMGEA 285

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L+ NNT+  LDL  N + D                                +G   LA+ 
Sbjct: 286 LKTNNTLVWLDLSFNRISD--------------------------------KGLTMLAKG 313

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
            + VN+ L ++ +  N   ++GA  +  A+  NE  A+  L+L
Sbjct: 314 LE-VNDTLRTLRIGDNPFGEEGALLLINAIFKNEKSAIEDLDL 355



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 2/222 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S +++S    G EG  ++ E L  N T   ++ + N    +  + F   L+ N  LK L
Sbjct: 152 ISILNISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKEL 211

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++SGN   + G + +   +  N  +E L LS   LR +GA A+   +K+N  ++ L+L+ 
Sbjct: 212 DISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSW 271

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  ++ EAL  N+T+  L L+ N     G   LAKGLE N +LR L +  N  G
Sbjct: 272 NGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFG 331

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF-HVAEYIK 384
           +EG   L++ +  +  K A+ D+   S+     F  +AE ++
Sbjct: 332 EEGALLLINAI-FKNEKSAIEDLDLKSVRVNREFLELAEKLR 372



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 41/274 (14%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLWIN 393
           +++  + +G  G +A+ + L      L  L+I +N I+A+G   +A+ + +NC   + +N
Sbjct: 99  MNMSHHGLGPNGTKAIAAPLVINTSILE-LNIEDNWITAEGMRDIADMLMENCYISI-LN 156

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N +G EGA  + + L++N T+ T+++  N+         A  L+ N  +  LD++ N
Sbjct: 157 ISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGN 216

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + + + +  +  I TL L W  +   GA  V   ++ N T+  LDL  NG  D
Sbjct: 217 EFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFAD 276

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           E                                GA  + ++ K  N  L  +DL+FN I 
Sbjct: 277 E--------------------------------GAMAMGEALKT-NNTLVWLDLSFNRIS 303

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           D G   +A+ L+ N+   + +L + +N    FG+
Sbjct: 304 DKGLTMLAKGLEVND--TLRTLRIGDN---PFGE 332



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 88/175 (50%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  E  + + E  +E     ++++S  +F D    + AE+L  N   +E+  + N    
Sbjct: 161 KLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCE 220

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +     + +N A++TLNLS N +  +G   +C  +  N  V+ L LS     DEGA 
Sbjct: 221 LGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAM 280

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           A+ E LK N+ L  L+L+ N I   G T LA+ L  N T+R+L +  N  G  GA
Sbjct: 281 AMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEGA 335



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 133/271 (49%), Gaps = 20/271 (7%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I DEG  A  S           +DI   S    G    + ++ + +  + +N+  + +G 
Sbjct: 58  IEDEGRTAYRS--------FTAVDIYFKSCEQLGVVPASYFVTHLQHEV-MNMSHHGLGP 108

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G + IA  L  N +I  +++  N I ++G   IA +L +N  I+ L++++N +G++GA+
Sbjct: 109 NGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLMENCYISILNISHNKLGSEGAR 168

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
            + E+L+ +  + TL +       S  ++ A+ LR N  +  LD+  N    E C    G
Sbjct: 169 YVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGN----EFCEL--G 222

Query: 522 LSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             +   AI + + +   +L  N+L  +GA  +    K  N  + ++DL++N   D+GA A
Sbjct: 223 GEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKS-NITVKTLDLSWNGFADEGAMA 281

Query: 580 IAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           + +ALK N    +  L+L+ N ++  G + L
Sbjct: 282 MGEALKTNN--TLVWLDLSFNRISDKGLTML 310


>gi|386333663|ref|YP_006029833.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
 gi|334196112|gb|AEG69297.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
          Length = 629

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 202/442 (45%), Gaps = 93/442 (21%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +S+++     GDEG   LA S     T + ++ + NGI  AG+  F      N  L  L
Sbjct: 264 LASLNLHNNGIGDEGALALATS----GTLKSLNASNNGIGDAGVLGF----ADNAVLTQL 315

Query: 224 NLSGNPIGDEGVKCL-CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL+GN IG  G + L C     N  +  L LS+  L D GA+ +A     N  L  L L 
Sbjct: 316 NLAGNMIGPAGARALRC-----NTSLTELDLSTNRLGDAGAQVLAA----NRSLTSLNLR 366

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G     EAL  N+T++SL+L+ N  G  GA AL     G+ +LREL L   +I
Sbjct: 367 HNEIGDDG----TEALARNTTLKSLNLSYNPIGFWGAGALG----GSTTLRELDLRCCAI 418

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
              G  AL     +R   LA L +G+N I                            GD 
Sbjct: 419 DPYGASAL-----ARNTSLASLHLGSNRI----------------------------GDS 445

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA     +RT+T +DL  NNIH  GA A+A     N  +TSL+L  N +  DGA A
Sbjct: 446 GARAIA----TSRTLTLLDLSRNNIHDAGAQALA----GNGSLTSLNLYGNEVDDDGAAA 497

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           L+     H  + +L LG  +IG +GA+ +A     + T++ LDL  N +  E   G + L
Sbjct: 498 LAH----HPRLTSLNLGRNRIGPNGAQHLA----KSATLTELDLSENRIGPE---GADAL 546

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
           S            +  +L ++     +  A++F   + +LTS+D   N + + G    A+
Sbjct: 547 SL---------STVLTTLNVSDNAIGEKGARAFAEKSTSLTSLDARNNGMGEAG----AK 593

Query: 583 ALKANEDVAVTSLNLANNFLTK 604
            L+AN  +  T  N   NFL +
Sbjct: 594 MLEANTRLTGTQQN--PNFLAE 613



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 198/428 (46%), Gaps = 70/428 (16%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL--CDILVDNAGVERLQLSSVDLRD 260
           T +G+      L +   LK+L+L+G  I  EG + L  C  L        L L+   + D
Sbjct: 176 TGSGVSNAGLALLATRPLKSLSLNGIEIDAEGARLLATCTSLTS------LSLTGCSIGD 229

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
             A A+A   ++ SI   L+L+ NMI   G  +LA A L      SL+L+ N  G  GA 
Sbjct: 230 RAATALA---RSRSIA-SLDLSVNMIGPDGARALAGAPLA-----SLNLHNNGIGDEGAL 280

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA     + +L+ L+   N IGD G+        +    L  L++  N I   G    A
Sbjct: 281 ALAT----SGTLKSLNASNNGIGDAGVLGF-----ADNAVLTQLNLAGNMIGPAG----A 327

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             ++   SL  ++L  N +GD GA+ +A     NR++T+++L  N I   G  A+AR   
Sbjct: 328 RALRCNTSLTELDLSTNRLGDAGAQVLA----ANRSLTSLNLRHNEIGDDGTEALAR--- 380

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ + SL+L+YNPIG  GA AL            L L  C I   GA  +A     N +
Sbjct: 381 -NTTLKSLNLSYNPIGFWGAGALGGSTTLR----ELDLRCCAIDPYGASALA----RNTS 431

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVV 558
           ++ L L +N + D   SG         AI + + +    L  N +   GA+ LA      
Sbjct: 432 LASLHLGSNRIGD---SGAR-------AIATSRTLTLLDLSRNNIHDAGAQALAG----- 476

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV- 617
           N +LTS++L  NE+ DDGA A+A   +      +TSLNL  N +   G   L  +  L  
Sbjct: 477 NGSLTSLNLYGNEVDDDGAAALAHHPR------LTSLNLGRNRIGPNGAQHLAKSATLTE 530

Query: 618 YEMSEKEV 625
            ++SE  +
Sbjct: 531 LDLSENRI 538


>gi|403343192|gb|EJY70919.1| hypothetical protein OXYTRI_08213 [Oxytricha trifallax]
          Length = 902

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 172/364 (47%), Gaps = 42/364 (11%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKA 209
           +F  + +   ++D+S       G   +  SLGYNQ+  +++ ++      N + A G++ 
Sbjct: 319 KFIMKTQTIVALDLSSNEMTASGGQAILNSLGYNQSITDLNISSFEGLNRNTLGAKGVQP 378

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-----------------VDNAGVE--- 249
              VL  N+ L  LN+SGN IG++G+  +CD L                 +   G+E   
Sbjct: 379 LKSVLAYNMFLTMLNISGNFIGNKGLSYICDGLREGQNQTLIKLNLALNDISGDGIEYLY 438

Query: 250 ---------RLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALL 299
                     L LS   L+++G K I +LL K   +L  L L +   +  G TSL + + 
Sbjct: 439 STLGVTKIKELNLSRNPLKNKGIKLIGDLLSKGGLVLENLNLQDTQFNCQGATSLYQGIK 498

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
            N+ ++ L ++ N       N LA  L  N SL +L L    + D G   ++ G+  R  
Sbjct: 499 RNNKLKYLVIDDNNLQGKTLNELAAALWTNASLIKLSLENCQLQDNGCIYVIDGI-ERNS 557

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNC-KSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            +  L++  N+I  +GA  +A+++ +   SL  +N+  N +GD+G  KIA AL++NR IT
Sbjct: 558 FIKELNLKRNNIEYQGASRIAKFLDSAGVSLHHLNISENRLGDKGGTKIAKALQRNRGIT 617

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLK 477
            + +    I  + A  +A+ +  N  IT + L +N       K L+++ K  H NI+  +
Sbjct: 618 KVSMFDTEIRDECAKELAQAMSTNKSITHMSLGWNTF---SPKYLAQINKLSHENISKAR 674

Query: 478 LGWC 481
              C
Sbjct: 675 EVKC 678



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 184/389 (47%), Gaps = 25/389 (6%)

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           PI    +  + +I   +  + ++ L    L DEGAK  A+ +     +  L+L++N +  
Sbjct: 283 PISAHTIIRIVEI---SPNIAKILLPKNQLGDEGAKIFAKFIMKTQTIVALDLSSNEMTA 339

Query: 289 SGFTSLAEALLENSTIRSLH------LNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           SG  ++  +L  N +I  L+      LN N  GA G   L   L  N  L  L++ GN I
Sbjct: 340 SGGQAILNSLGYNQSITDLNISSFEGLNRNTLGAKGVQPLKSVLAYNMFLTMLNISGNFI 399

Query: 343 GDEGIRALMSGLSSRKGK---LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           G++G+  +  GL  R+G+   L  L++  N IS  G  ++   +   K +  +NL  N +
Sbjct: 400 GNKGLSYICDGL--REGQNQTLIKLNLALNDISGDGIEYLYSTLGVTK-IKELNLSRNPL 456

Query: 400 GDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            ++G + I D L K    +  ++L     + +GA+++ + +K N+ +  L +  N +   
Sbjct: 457 KNKGIKLIGDLLSKGGLVLENLNLQDTQFNCQGATSLYQGIKRNNKLKYLVIDDNNLQGK 516

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
               L+  L  + ++  L L  CQ+  +G  +V D +  N+ I  L+L+ N +  E    
Sbjct: 517 TLNELAAALWTNASLIKLSLENCQLQDNGCIYVIDGIERNSFIKELNLKRNNI--EYQGA 574

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
                F  SA  SL H+   ++  N L  +G   +A++ +  N  +T + +   EIRD+ 
Sbjct: 575 SRIAKFLDSAGVSLHHL---NISENRLGDKGGTKIAKALQR-NRGITKVSMFDTEIRDEC 630

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKF 605
           A  +AQA+  N+ +   SL   N F  K+
Sbjct: 631 AKELAQAMSTNKSITHMSLGW-NTFSPKY 658


>gi|123478687|ref|XP_001322505.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121905352|gb|EAY10282.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 547

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 158/337 (46%), Gaps = 29/337 (8%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD--------------------- 240
           I  AG+KA    L  N  L  L+L     G+EG   L D                     
Sbjct: 145 IGDAGVKAIAFALTKNRTLSGLDLINCKCGEEGAAELSDALLNNTTLTTLLLQDRFEAKV 204

Query: 241 ------ILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
                 +L D N  ++ L L S ++  +  + + E LKNN  L  L L+ N ++      
Sbjct: 205 IYSLGSMLSDANCRLQALYLWSCNITTDLLQKLCESLKNNRCLTTLALSYNKLNDDAAYY 264

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           ++  +LEN +I  LHL  N      ++  +  L  N +L+ L +  N I  EG+  L   
Sbjct: 265 ISRMILENRSITKLHLGANKFTRSASSYFSICLNKNTTLQYLDISRNVIASEGLWPLSVA 324

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           LS  K +L  LD+ +NSI  +GA   ++  +  +S++ + L  N  GD     +A  LK 
Sbjct: 325 LSGNK-ELKFLDLRHNSIDFRGAAMFSDLFEQNESIMTLRLSGNKFGDPSIALMASKLKM 383

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N++I  ++L   ++  KG +AI   LK+N  +  L ++ N + ++  K+L E+LK +  +
Sbjct: 384 NKSIKVLELMDVDMTKKGFTAICHALKENKTLQKLTVSQNNLNSEAMKSLCELLKVNTTL 443

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           N++ +  C I   G  ++A+ +  N ++S LD+  N 
Sbjct: 444 NSISMSGCGIDDQGCAYIAEGIGSNASLSYLDISMNN 480



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 184/445 (41%), Gaps = 61/445 (13%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL--- 270
           L +N  +  ++L  N I       + D+L  +  +  L++   D+ DE  + ++ +L   
Sbjct: 41  LNANSFIAKISLQKNQISKRICMRIFDLLKAHPKLTHLEIIDNDVDDESIEHLSNVLISL 100

Query: 271 --KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGANALAKGLE 327
               +SI+ +L    N  D  G  +LA A+ +N+ +  L L GN + G  G  A+A  L 
Sbjct: 101 PPNRDSIMLILR--KNSFDIRGARALARAIEKNAPVVWLDLRGNDHIGDAGVKAIAFALT 158

Query: 328 GNKSLRELHLHGNSIGDEG---------------------------IRALMSGLSSRKGK 360
            N++L  L L     G+EG                           I +L S LS    +
Sbjct: 159 KNRTLSGLDLINCKCGEEGAAELSDALLNNTTLTTLLLQDRFEAKVIYSLGSMLSDANCR 218

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  L + + +I+      + E +KN + L  + L  N + D+ A  I+  + +NR+IT +
Sbjct: 219 LQALYLWSCNITTDLLQKLCESLKNNRCLTTLALSYNKLNDDAAYYISRMILENRSITKL 278

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            LG N      +S  +  L  N+ +  LD++ N I ++G   LS  L  +  +  L L  
Sbjct: 279 HLGANKFTRSASSYFSICLNKNTTLQYLDISRNVIASEGLWPLSVALSGNKELKFLDLRH 338

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRD----------------------EVCSG 518
             I   GA   +D+   N +I  L L  N   D                      +V   
Sbjct: 339 NSIDFRGAAMFSDLFEQNESIMTLRLSGNKFGDPSIALMASKLKMNKSIKVLELMDVDMT 398

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
             G +    A+   K +   ++  N L  +  K L +  K VN  L SI ++   I D G
Sbjct: 399 KKGFTAICHALKENKTLQKLTVSQNNLNSEAMKSLCELLK-VNTTLNSISMSGCGIDDQG 457

Query: 577 AFAIAQALKANEDVAVTSLNLANNF 601
              IA+ + +N  ++   +++ NNF
Sbjct: 458 CAYIAEGIGSNASLSYLDISM-NNF 481



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 92/188 (48%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S      EGL+ L+ +L  N+  + +    N I   G   F  + + N ++ TL LS
Sbjct: 306 LDISRNVIASEGLWPLSVALSGNKELKFLDLRHNSIDFRGAAMFSDLFEQNESIMTLRLS 365

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN  GD  +  +   L  N  ++ L+L  VD+  +G  AI   LK N  L+ L ++ N +
Sbjct: 366 GNKFGDPSIALMASKLKMNKSIKVLELMDVDMTKKGFTAICHALKENKTLQKLTVSQNNL 425

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
           +     SL E L  N+T+ S+ ++G      G   +A+G+  N SL  L +  N+    G
Sbjct: 426 NSEAMKSLCELLKVNTTLNSISMSGCGIDDQGCAYIAEGIGSNASLSYLDISMNNFTVNG 485

Query: 347 IRALMSGL 354
           +  +++ L
Sbjct: 486 MNKILNAL 493



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 128/302 (42%), Gaps = 18/302 (5%)

Query: 130 WSVGAGTNLLSGFT----------------GKLFRESKQTLNEFAKELRAFSSVDMSGRN 173
           WS    T+LL                     KL  ++   ++    E R+ + + +    
Sbjct: 225 WSCNITTDLLQKLCESLKNNRCLTTLALSYNKLNDDAAYYISRMILENRSITKLHLGANK 284

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           F      + +  L  N T + +  + N I + G+      L  N  LK L+L  N I   
Sbjct: 285 FTRSASSYFSICLNKNTTLQYLDISRNVIASEGLWPLSVALSGNKELKFLDLRHNSIDFR 344

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G     D+   N  +  L+LS     D     +A  LK N  ++VLEL +  +   GFT+
Sbjct: 345 GAAMFSDLFEQNESIMTLRLSGNKFGDPSIALMASKLKMNKSIKVLELMDVDMTKKGFTA 404

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +  AL EN T++ L ++ N   +    +L + L+ N +L  + + G  I D+G   +  G
Sbjct: 405 ICHALKENKTLQKLTVSQNNLNSEAMKSLCELLKVNTTLNSISMSGCGIDDQGCAYIAEG 464

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALK 412
           + S    L+ LDI  N+ +  G   +   +    SLL I+   N   D+   +KIAD L+
Sbjct: 465 IGS-NASLSYLDISMNNFTVNGMNKILNALLGNFSLLKIDYNNNTNNDQNLGDKIADYLE 523

Query: 413 QN 414
           +N
Sbjct: 524 RN 525



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 180/405 (44%), Gaps = 26/405 (6%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + ++NL    + D     L D L  N+ + ++ L    +       I +LLK +  L  L
Sbjct: 19  INSINLVNVRMDDIIADKLIDALNANSFIAKISLQKNQISKRICMRIFDLLKAHPKLTHL 78

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRS---LHLNGNYGGALGANALAKGLEGNKSLRELH 336
           E+ +N +D      L+  L+     R    L L  N     GA ALA+ +E N  +  L 
Sbjct: 79  EIIDNDVDDESIEHLSNVLISLPPNRDSIMLILRKNSFDIRGARALARAIEKNAPVVWLD 138

Query: 337 LHGNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           L GN  IGD G++A+   L+  +  L+ LD+ N     +GA  +++ + N  +     L 
Sbjct: 139 LRGNDHIGDAGVKAIAFALTKNR-TLSGLDLINCKCGEEGAAELSDALLNNTT-----LT 192

Query: 396 MNDIGDEGAEKIADAL-----KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
              + D    K+  +L       N  +  + L   NI +     +   LK+N  +T+L L
Sbjct: 193 TLLLQDRFEAKVIYSLGSMLSDANCRLQALYLWSCNITTDLLQKLCESLKNNRCLTTLAL 252

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           +YN +  D A  +S ++  + +I  L LG  +   S + + +  L  N T+  LD+  N 
Sbjct: 253 SYNKLNDDAAYYISRMILENRSITKLHLGANKFTRSASSYFSICLNKNTTLQYLDISRNV 312

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLA 568
           +  E      GL     A+   K + F  L  N +  +GA   +  F+  NE++ ++ L+
Sbjct: 313 IASE------GLWPLSVALSGNKELKFLDLRHNSIDFRGAAMFSDLFE-QNESIMTLRLS 365

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            N+  D     +A  LK N+ + V  L L +  +TK G +A+  A
Sbjct: 366 GNKFGDPSIALMASKLKMNKSIKV--LELMDVDMTKKGFTAICHA 408


>gi|301788230|ref|XP_002929526.1| PREDICTED: ribonuclease inhibitor-like [Ailuropoda melanoleuca]
          Length = 456

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 190/425 (44%), Gaps = 13/425 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+  +   D       E L   Q +E V     G+T    K     LQ+N +L  L+L
Sbjct: 2   SLDIQCQQLSDA---RWTELLPLLQQSEVVRLDDCGLTEMRCKDISSALQANPSLTELSL 58

Query: 226 SGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV   L  +      + +L L +  L   G   + ++L++   LR L LN+N
Sbjct: 59  CTNELGDAGVHLVLQGLQSPTCKIRKLSLQNCCLTKTGCGVLPDMLRSMPTLRELYLNDN 118

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L   LL+    +  L +      A    +LA  L   +  +EL +  N +G
Sbjct: 119 PLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLASALRAKRHFKELAVSNNELG 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L VL + N  +++     +   + +  SL  ++L  N +GD+G
Sbjct: 179 EAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVVASKPSLQELDLGDNKLGDQG 238

Query: 404 -AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            A      L  +  I  + L   +I + G   + RVL+    +  + LA N +G +GA+ 
Sbjct: 239 IATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAKESLKEMSLAGNALGDEGARL 298

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCN 520
           L E +L+    + +L +  C   A+  +  + ML  N  +  L L  N L D  V   C 
Sbjct: 299 LCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCLVELQLSNNKLGDCGVQQLCQ 358

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
           GLS   +A+     +L+   C     G   LA S  +VN +L  +DL+ N + ++G   +
Sbjct: 359 GLSQPGAAL----QVLWLGDCDVAHSGCASLA-SVLLVNRSLRELDLSNNCMGEEGILRL 413

Query: 581 AQALK 585
            ++++
Sbjct: 414 MESVE 418



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 4/325 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + +     + ++    GD GL  L   L   Q   E++      +TAA  ++  
Sbjct: 99  VLPDMLRSMPTLRELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
             L++    K L +S N +G+ GV+ LC  LVD+A  +E L+L +  L     + +  ++
Sbjct: 159 SALRAKRHFKELAVSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            +   L+ L+L +N +   G  +L   LL  S  IR L L        G   L + L   
Sbjct: 219 ASKPSLQELDLGDNKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+E+ L GN++GDEG R L   L     +L  L + + S +A    H +  +     L
Sbjct: 279 ESLKEMSLAGNALGDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCL 338

Query: 390 LWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + + L  N +GD G +++   L Q    +  + LG  ++   G +++A VL  N  +  L
Sbjct: 339 VELQLSNNKLGDCGVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNRSLREL 398

Query: 449 DLAYNPIGADGAKALSEVLKFHGNI 473
           DL+ N +G +G   L E ++  G +
Sbjct: 399 DLSNNCMGEEGILRLMESVEQPGCV 423



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 165/357 (46%), Gaps = 5/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L        ++S     +T  G      +L+S   L+
Sbjct: 52  SLTELSLCTNELGDAGVHLVLQGLQSPTCKIRKLSLQNCCLTKTGCGVLPDMLRSMPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L L+ NP+GD G++ LC  L+D    +E+LQ+   +L     +++A  L+     + L 
Sbjct: 112 ELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLASALRAKRHFKELA 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G   L   L++++  +  L L      +     L   +    SL+EL L  
Sbjct: 172 VSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVVASKPSLQELDLGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD+GI  L   L     ++ VL + +  I+  G   +   ++  +SL  ++L  N +
Sbjct: 232 NKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAKESLKEMSLAGNAL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + ++L +    + ++ +   +  +      + +L  N+ +  L L+ N +G  
Sbjct: 292 GDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCLVELQLSNNKLGDC 351

Query: 459 GAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           G + L + L   G  +  L LG C +  SG   +A +L  N ++  LDL  N + +E
Sbjct: 352 GVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNRSLRELDLSNNCMGEE 408



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 152/386 (39%), Gaps = 30/386 (7%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSL 307
           E ++L    L +   K I+  L+ N  L  L L  N +  +G   + + L   +  IR L
Sbjct: 26  EVVRLDDCGLTEMRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQSPTCKIRKL 85

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L        G   L   L    +LREL+L+ N +GD G++ L SGL   +  L  L + 
Sbjct: 86  SLQNCCLTKTGCGVLPDMLRSMPTLRELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVE 145

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNN 426
             +++A     +A  ++  +    + +  N++G+ G   +   L  +   +  + L    
Sbjct: 146 YCNLTAASCESLASALRAKRHFKELAVSNNELGEAGVRVLCRGLVDSACQLEVLKLENCG 205

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS-EVLKFHGNINTLKLGWCQIGA 485
           + S     +  V+     +  LDL  N +G  G   L   +L     I  L L  C I  
Sbjct: 206 LTSASCEDLCGVVASKPSLQELDLGDNKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITT 265

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDE----VCS-----GCN-------GLSFFHSAI 529
           +G   +  +LR   ++  + L  N L DE    +C       C          SF  ++ 
Sbjct: 266 AGCRDLCRVLRAKESLKEMSLAGNALGDEGARLLCESLLEPACQLQSLWVKSCSFTAASC 325

Query: 530 YSLKHMLFYSLCINYLQ---------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
                ML  + C+  LQ         G + L Q       AL  + L   ++   G  ++
Sbjct: 326 QHFSSMLTRNTCLVELQLSNNKLGDCGVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASL 385

Query: 581 AQALKANEDVAVTSLNLANNFLTKFG 606
           A  L  N   ++  L+L+NN + + G
Sbjct: 386 ASVLLVNR--SLRELDLSNNCMGEEG 409


>gi|395827857|ref|XP_003787109.1| PREDICTED: uncharacterized protein C14orf166B homolog [Otolemur
           garnettii]
          Length = 541

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 131/245 (53%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G +G K +   LV N  + +L++   D+ DEG  ++ ++L+ N  L
Sbjct: 88  NMEEPHMNLNHHGLGPKGTKAIAIALVSNTAITKLEVEDNDITDEGLLSLVQMLQENYYL 147

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   ++E L  + S+I +L L+GN      A  L + L  N  +R+L
Sbjct: 148 QEMNISNNSLGLEGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKL 207

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N   D G   L   L+   G L  LD+  N    +GA  +   ++   +L  ++L+
Sbjct: 208 NLSHNQFSDLGGEHLGQMLAINVG-LTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLF 266

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+EGA  + D L+ N ++  +D+G N+I + GAS I+R L+ N  +  L L  NPI
Sbjct: 267 MNGFGNEGALALGDVLRLNSSLVYLDVGSNSIGNDGASKISRGLEANETLKVLKLFLNPI 326

Query: 456 GADGA 460
             DGA
Sbjct: 327 SMDGA 331



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 129/249 (51%), Gaps = 2/249 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++    G +G   +A +L  N    ++    N IT  G+ +   +LQ N  L+ +N+S
Sbjct: 94  MNLNHHGLGPKGTKAIAIALVSNTAITKLEVEDNDITDEGLLSLVQMLQENYYLQEMNIS 153

Query: 227 GNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +G EG + + + L  D + +  L+LS  +L++E A+ + + L  N  +R L L++N 
Sbjct: 154 NNSLGLEGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKLNLSHNQ 213

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L + L  N  + SL L+ N     GA AL  GL  N +L++L L  N  G+E
Sbjct: 214 FSDLGGEHLGQMLAINVGLTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFGNE 273

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L      L  LD+G+NSI   GA  ++  ++  ++L  + L++N I  +GA 
Sbjct: 274 GALALGDVL-RLNSSLVYLDVGSNSIGNDGASKISRGLEANETLKVLKLFLNPISMDGAL 332

Query: 406 KIADALKQN 414
            +  ++K+N
Sbjct: 333 LLILSIKRN 341



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 148/321 (46%), Gaps = 43/321 (13%)

Query: 308 HLNGNYGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           H+N N+ G    G  A+A  L  N ++ +L +  N I DEG+ +L+  L      L  ++
Sbjct: 93  HMNLNHHGLGPKGTKAIAIALVSNTAITKLEVEDNDITDEGLLSLVQMLQENY-YLQEMN 151

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           I NNS+  +GA  ++E+++   S +W + L  N++ +E AE +  AL  N  I  ++L  
Sbjct: 152 ISNNSLGLEGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKLNLSH 211

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N     G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G
Sbjct: 212 NQFSDLGGEHLGQMLAINVGLTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFG 271

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
             GA  + D+LR N+++  LD+ +N + ++                              
Sbjct: 272 NEGALALGDVLRLNSSLVYLDVGSNSIGND------------------------------ 301

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
             GA  +++  +  NE L  + L  N I  DGA  +  ++K N    +  L+++N  +T+
Sbjct: 302 --GASKISRGLE-ANETLKVLKLFLNPISMDGALLLILSIKRNPKSRMEELDISNVLVTE 358

Query: 605 F------GQSALTDAKDLVYE 619
                  G  AL    D+VY+
Sbjct: 359 QFVKTLDGVYALHPQLDVVYK 379



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 116/233 (49%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + LN++ +   G  ++A AL+ N+ I  L +  N     G  +L + L+ N  L+E+++ 
Sbjct: 94  MNLNHHGLGPKGTKAIAIALVSNTAITKLEVEDNDITDEGLLSLVQMLQENYYLQEMNIS 153

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NS+G EG R +   L      +  L++  N++  + A  + + +     +  +NL  N 
Sbjct: 154 NNSLGLEGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKLNLSHNQ 213

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             D G E +   L  N  +T++DL  N  H +GA A+   L+ N  +  LDL  N  G +
Sbjct: 214 FSDLGGEHLGQMLAINVGLTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFGNE 273

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           GA AL +VL+ + ++  L +G   IG  GA  ++  L  N T+ +L L  N +
Sbjct: 274 GALALGDVLRLNSSLVYLDVGSNSIGNDGASKISRGLEANETLKVLKLFLNPI 326



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 3/228 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LK 221
           A + +++   +  DEGL  L + L  N   +E++ + N +   G +     LQ + + + 
Sbjct: 118 AITKLEVEDNDITDEGLLSLVQMLQENYYLQEMNISNNSLGLEGARIISEFLQRDASSIW 177

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L LSGN + +E  + LC  L  N  + +L LS     D G + + ++L  N  L  L+L
Sbjct: 178 NLELSGNNLKEESAELLCQALSTNYRIRKLNLSHNQFSDLGGEHLGQMLAINVGLTSLDL 237

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N     G  +L   L  N T++ L L  N  G  GA AL   L  N SL  L +  NS
Sbjct: 238 SWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFGNEGALALGDVLRLNSSLVYLDVGSNS 297

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKS 388
           IG++G   +  GL + +  L VL +  N IS  GA  +   IK N KS
Sbjct: 298 IGNDGASKISRGLEANE-TLKVLKLFLNPISMDGALLLILSIKRNPKS 344



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 30/222 (13%)

Query: 149 ESKQTLNEF-AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + ++EF  ++  +  ++++SG N  +E    L ++L  N    +++ + N  +  G 
Sbjct: 160 EGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKLNLSHNQFSDLGG 219

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L +L+LS N     G   LC+ L  N  +++L L      +EGA A+ 
Sbjct: 220 EHLGQMLAINVGLTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFGNEGALALG 279

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           ++L+ NS L  L++ +N I                            G  GA+ +++GLE
Sbjct: 280 DVLRLNSSLVYLDVGSNSI----------------------------GNDGASKISRGLE 311

Query: 328 GNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGN 368
            N++L+ L L  N I  +G +  ++S   + K ++  LDI N
Sbjct: 312 ANETLKVLKLFLNPISMDGALLLILSIKRNPKSRMEELDISN 353


>gi|300704275|ref|YP_003745878.1| leucine-rich-repeat type III effector protein (gala6) [Ralstonia
           solanacearum CFBP2957]
 gi|299071939|emb|CBJ43268.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
           solanacearum CFBP2957]
          Length = 519

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 213/462 (46%), Gaps = 84/462 (18%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + +S+ ++G + GD     LA+S    ++   +  + N I   G +A      ++  L +
Sbjct: 106 SLTSLSLTGCSIGDRAATALAQS----RSIASLDLSVNMIGPDGARAL-----ASAPLVS 156

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGDEG   L      +  ++ L  S+  + D G    A+    N++L  L L 
Sbjct: 157 LNLHNNGIGDEGALALAT----SGTLKSLNASNNGIGDAGVLGFAD----NTVLTQLNLA 208

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            NMI  +G    A AL  N+++  L L+ N  G  GA ALA    G++SL  L++  N I
Sbjct: 209 GNMIGPAG----ARALRRNTSLTELDLSTNRLGDAGAQALA----GSRSLTSLNVRSNEI 260

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV--------------------AEY 382
           GD+G  AL     +R   L  L++  N I   GA  +                    A  
Sbjct: 261 GDDGTEAL-----ARNTTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASA 315

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +    SL  ++L  N IGD+GA     AL  +RT+T +DL  NNIH  GA A+A     N
Sbjct: 316 LARNTSLASLHLGSNRIGDDGAR----ALATSRTLTLLDLSRNNIHDAGAQALA----GN 367

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +TSL+L  N +  DGA AL++    H  + +L LG  +IG +GA+ +A     + T++
Sbjct: 368 GSLTSLNLYGNEVDDDGAAALAQ----HPRLTSLNLGRNRIGPNGAQHLA----KSATLT 419

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            LDL  N L  E   G   LS            +  +L ++     +  A++F   + +L
Sbjct: 420 ELDLSENRLGPE---GAEALSL---------STVLTTLNVSDNAIGEAGARAFAEKSTSL 467

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           TS+D   N + + G    A  L+AN  +  T  N   NFL +
Sbjct: 468 TSLDARNNRMGEAG----ANLLEANTRLTGTPQN--PNFLAE 503



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 151/372 (40%), Gaps = 100/372 (26%)

Query: 330 KSLRELHLHGNSIGDEGIRAL----------MSGLS---------SRKGKLAVLDIGNNS 370
           + L+ L L+G  I  EG R L          ++G S         ++   +A LD+  N 
Sbjct: 81  RPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQSRSIASLDLSVNM 140

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA----------------EKIADA---- 410
           I   GA  +A        L+ +NL+ N IGDEGA                  I DA    
Sbjct: 141 IGPDGARALAS-----APLVSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLG 195

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL------- 463
              N  +T ++L GN I   G    AR L+ N+ +T LDL+ N +G  GA+AL       
Sbjct: 196 FADNTVLTQLNLAGNMIGPAG----ARALRRNTSLTELDLSTNRLGDAGAQALAGSRSLT 251

Query: 464 -------------SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
                        +E L  +  + +L L +  IG  G    A  L  + T+  LDLR   
Sbjct: 252 SLNVRSNEIGDDGTEALARNTTLKSLNLSYNPIGFWG----AGALGGSTTLRELDLRCCA 307

Query: 511 LRDEVCSGC---NGLSFFH-----------SAIYSLKHMLFYSLCINYLQ--GAKCLAQS 554
           +     S       L+  H            A+ + + +    L  N +   GA+ LA  
Sbjct: 308 IDPYGASALARNTSLASLHLGSNRIGDDGARALATSRTLTLLDLSRNNIHDAGAQALAG- 366

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
               N +LTS++L  NE+ DDGA A+AQ  +      +TSLNL  N +   G   L  + 
Sbjct: 367 ----NGSLTSLNLYGNEVDDDGAAALAQHPR------LTSLNLGRNRIGPNGAQHLAKSA 416

Query: 615 DLV-YEMSEKEV 625
            L   ++SE  +
Sbjct: 417 TLTELDLSENRL 428


>gi|440795520|gb|ELR16640.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 635

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 25/316 (7%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDN-----------AGVERLQLSSVDLRDEGAKAIA 267
           A+  ++L    +G EG + L D L              A    + L + ++  EGA AIA
Sbjct: 44  AVNKIDLCKQFLGPEGAQTLADALTRASLHGDAPPTPLASARSVLLGADEIGPEGAMAIA 103

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            +L +N  LR + L  N I   G  +LA++L EN T+ +L L  N  G  GA +LA+ L 
Sbjct: 104 AMLHHNKTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRNSIGPEGAKSLARVLA 163

Query: 328 GNKSLRELHLHG-NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           G+     L     N IG EG + L   L   + +L VL +G N++   G+  +A  +++ 
Sbjct: 164 GDNDALLLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHN 223

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL--KDNSV 444
           + L  + L +ND+GDEGA   A  L  N T+  + L  N+I   GA+A+A  L    NS 
Sbjct: 224 RVLQELYLDVNDMGDEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSA 283

Query: 445 ITSLDLAY-----------NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           +  L+L Y           N IG  G  AL+ +L  +  +  L L   Q+   GA  +  
Sbjct: 284 LQMLNLGYQKSTVVMGGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGR 343

Query: 494 MLRYNNTISILDLRAN 509
            L  N ++ +L+LRAN
Sbjct: 344 ALASNRSLRVLELRAN 359



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 169/380 (44%), Gaps = 30/380 (7%)

Query: 136 TNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ----- 190
           T  L     KL  +  Q   E  ++  A + +D+  +  G EG   LA++L         
Sbjct: 17  TYTLDDTLAKLKLQHHQEAGEGKRQAEAVNKIDLCKQFLGPEGAQTLADALTRASLHGDA 76

Query: 191 ------TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
                 +A  V   A+ I   G  A   +L  N  L+T+ L  N IG +G   L D L +
Sbjct: 77  PPTPLASARSVLLGADEIGPEGAMAIAAMLHHNKTLRTVFLGCNDIGPKGAAALADSLKE 136

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMIDYSGFTSLAEALLENST 303
           N  VE L L    +  EGAK++A +L  ++   +L     N I   G   LA  LLE+  
Sbjct: 137 NKTVEALWLKRNSIGPEGAKSLARVLAGDNDALLLLDLVFNKIGPEGGQHLAR-LLEDER 195

Query: 304 IR--SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            R   L L GN  G  G+  LA  LE N+ L+EL+L  N +GDEG  A    L++    L
Sbjct: 196 CRLEVLFLGGNALGPAGSARLAHSLEHNRVLQELYLDVNDMGDEGAAAFARVLAT-NSTL 254

Query: 362 AVLDIGNNSISAKGAFHVAE-YIKNCKSLL-WINL-----------YMNDIGDEGAEKIA 408
             L + +N I   GA  +AE  I N  S L  +NL             N IGD G   +A
Sbjct: 255 RALTLASNDIGDDGAAALAEALISNPNSALQMLNLGYQKSTVVMGGRPNRIGDAGVAALA 314

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN-PIGADGAKALSEVL 467
             L  NRT+  ++L  N +   GA A+ R L  N  +  L+L  N  +G DG   L + +
Sbjct: 315 RMLATNRTLVALNLNKNQVTRVGARALGRALASNRSLRVLELRANYQLGDDGVVDLLDAM 374

Query: 468 KFHGNINTLKLGWCQIGASG 487
             +  +  L L  CQ+G  G
Sbjct: 375 ATNDTLAALDLVGCQVGLVG 394



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 16/236 (6%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            G EG   LA  L   +   EV F   N +  AG       L+ N  L+ L L  N +GD
Sbjct: 179 IGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHNRVLQELYLDVNDMGD 238

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL--KNNSILRVLEL--------- 281
           EG      +L  N+ +  L L+S D+ D+GA A+AE L    NS L++L L         
Sbjct: 239 EGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSALQMLNLGYQKSTVVM 298

Query: 282 --NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
               N I  +G  +LA  L  N T+ +L+LN N    +GA AL + L  N+SLR L L  
Sbjct: 299 GGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGRALASNRSLRVLELRA 358

Query: 340 N-SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           N  +GD+G+  L+  +++    LA LD+    +   G   +  +++   SL+ ++L
Sbjct: 359 NYQLGDDGVVDLLDAMATND-TLAALDLVGCQVGLVGLRRLLRHVETHPSLISVHL 413



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 121/234 (51%), Gaps = 35/234 (14%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +G + I  +GA  +A  + + K+L  + L  NDIG +GA  +AD+LK+N+T+  + L  N
Sbjct: 89  LGADEIGPEGAMAIAAMLHHNKTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRN 148

Query: 426 NIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQI 483
           +I  +GA ++ARVL  DN  +  LDL +N IG +G + L+ +L+     +  L LG   +
Sbjct: 149 SIGPEGAKSLARVLAGDNDALLLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNAL 208

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G +G+  +A  L +N  +  L L  N + DE      G + F                  
Sbjct: 209 GPAGSARLAHSLEHNRVLQELYLDVNDMGDE------GAAAF------------------ 244

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
               A+ LA      N  L ++ LA N+I DDGA A+A+AL +N + A+  LNL
Sbjct: 245 ----ARVLA-----TNSTLRALTLASNDIGDDGAAALAEALISNPNSALQMLNL 289



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 25/340 (7%)

Query: 279 LELNNNMIDYSGFTSLAEALLENS-----------TIRSLHLNGNYGGALGANALAKGLE 327
           ++L    +   G  +LA+AL   S           + RS+ L  +  G  GA A+A  L 
Sbjct: 48  IDLCKQFLGPEGAQTLADALTRASLHGDAPPTPLASARSVLLGADEIGPEGAMAIAAMLH 107

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            NK+LR + L  N IG +G  AL   L   K  +  L +  NSI  +GA  +A  +    
Sbjct: 108 HNKTLRTVFLGCNDIGPKGAAALADSLKENK-TVEALWLKRNSIGPEGAKSLARVLAGDN 166

Query: 388 SLLWINLYM-NDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             L +   + N IG EG + +A  L+  R  +  + LGGN +   G++ +A  L+ N V+
Sbjct: 167 DALLLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHNRVL 226

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             L L  N +G +GA A + VL  +  +  L L    IG  GA  +A+ L  N   ++  
Sbjct: 227 QELYLDVNDMGDEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSALQM 286

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHML-----FYSLCINYLQ----GAKCLAQSFK 556
           L     +  V  G        + + +L  ML       +L +N  Q    GA+ L ++  
Sbjct: 287 LNLGYQKSTVVMGGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGRAL- 345

Query: 557 VVNEALTSIDLAFN-EIRDDGAFAIAQALKANEDVAVTSL 595
             N +L  ++L  N ++ DDG   +  A+  N+ +A   L
Sbjct: 346 ASNRSLRVLELRANYQLGDDGVVDLLDAMATNDTLAALDL 385



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 132/307 (42%), Gaps = 45/307 (14%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL------- 214
           +   +V +   + G +G   LA+SL  N+T E +    N I   G K+   VL       
Sbjct: 110 KTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRNSIGPEGAKSLARVLAGDNDAL 169

Query: 215 -----------------------QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
                                       L+ L L GN +G  G   L   L  N  ++ L
Sbjct: 170 LLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHNRVLQEL 229

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL--ENSTIRSLHL 309
            L   D+ DEGA A A +L  NS LR L L +N I   G  +LAEAL+   NS ++ L+L
Sbjct: 230 YLDVNDMGDEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSALQMLNL 289

Query: 310 -----------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
                        N  G  G  ALA+ L  N++L  L+L+ N +   G RAL   L+S +
Sbjct: 290 GYQKSTVVMGGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGRALASNR 349

Query: 359 GKLAVLDI-GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             L VL++  N  +   G   + + +    +L  ++L    +G  G  ++   ++ + ++
Sbjct: 350 -SLRVLELRANYQLGDDGVVDLLDAMATNDTLAALDLVGCQVGLVGLRRLLRHVETHPSL 408

Query: 418 TTIDLGG 424
            ++ LGG
Sbjct: 409 ISVHLGG 415


>gi|163914891|ref|NP_001106443.1| leucine rich repeat containing 34 [Xenopus (Silurana) tropicalis]
 gi|157423135|gb|AAI53733.1| LOC100127617 protein [Xenopus (Silurana) tropicalis]
          Length = 409

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 165/339 (48%), Gaps = 20/339 (5%)

Query: 149 ESKQTLNEFAKELRA--------FSSVDMSGRN-------FGDEGLFFLAESLGYNQTAE 193
           E  Q +N F  E+ +         S++ + G N         DE    LA+ L  N    
Sbjct: 15  EQNQPINPFIAEILSQTEEQELYASTLKLCGNNRLVQVQRVSDEDFLVLAQVLSKNSFIT 74

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +    N +T  G       LQ+N ++  LN+ GN IG +G + +   L  N  +  L++
Sbjct: 75  NLDLRYNRVTDNGAAHIATFLQNNSSVLCLNIMGNEIGTDGSEHITKALHRNTTLLSLRM 134

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +   + ++G    A +L+ NS L  L+L +  +      +LA  LL+N T++SL+LN   
Sbjct: 135 TGDKIGNKGGMLFASMLQINSTLEELDLGDCDLGIQSLIALATVLLQNKTLKSLNLNRPI 194

Query: 314 GGALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
              +  +    L++ L  N +L+ELHL  + I D G++ L   L      L  L++  N 
Sbjct: 195 FYVMQEDTTVHLSEMLRVNSTLQELHLSKHEITDFGVQRLCDALHENH-TLKYLNLSCNK 253

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHS 429
           I+  G  ++AE +K  K+L  ++L  N + D+GA  +A+A+   NR++  + +  NNI  
Sbjct: 254 ITRDGVKYLAEVLKINKTLEILDLASNRMEDDGALYLAEAIYLYNRSLKALSVVSNNISG 313

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           KG  A+A  +K N+ +  + +  N I  + + A S++L+
Sbjct: 314 KGLQALAAAIKANNCLLYIYIWGNKINQEASMAFSQLLQ 352



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 152/313 (48%), Gaps = 10/313 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+      D G   +A  L  N +   ++   N I   G +     L  N  L +L
Sbjct: 73  ITNLDLRYNRVTDNGAAHIATFLQNNSSVLCLNIMGNEIGTDGSEHITKALHRNTTLLSL 132

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            ++G+ IG++G      +L  N+ +E L L   DL  +   A+A +L  N  L+ L LN 
Sbjct: 133 RMTGDKIGNKGGMLFASMLQINSTLEELDLGDCDLGIQSLIALATVLLQNKTLKSLNLNR 192

Query: 284 NM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +   +       L+E L  NST++ LHL+ +     G   L   L  N +L+ L+L  N
Sbjct: 193 PIFYVMQEDTTVHLSEMLRVNSTLQELHLSKHEITDFGVQRLCDALHENHTLKYLNLSCN 252

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMND 398
            I  +G++ L   L   K  L +LD+ +N +   GA ++AE  Y+ N +SL  +++  N+
Sbjct: 253 KITRDGVKYLAEVLKINK-TLEILDLASNRMEDDGALYLAEAIYLYN-RSLKALSVVSNN 310

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I  +G + +A A+K N  +  I + GN I+ + + A +++L+    ++S      P   D
Sbjct: 311 ISGKGLQALAAAIKANNCLLYIYIWGNKINQEASMAFSQLLQSGR-LSSSSTDVQPYVVD 369

Query: 459 GAKALSEVLKFHG 471
           G   L+E+  FHG
Sbjct: 370 GRVCLAEI--FHG 380



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 15/249 (6%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE    L   LS +   +  LD+  N ++  GA H+A +++N  S+L +N+  N+IG 
Sbjct: 55  VSDEDFLVLAQVLS-KNSFITNLDLRYNRVTDNGAAHIATFLQNNSSVLCLNIMGNEIGT 113

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G+E I  AL +N T+ ++ + G+ I +KG    A +L+ NS +  LDL    +G     
Sbjct: 114 DGSEHITKALHRNTTLLSLRMTGDKIGNKGGMLFASMLQINSTLEELDLGDCDLGIQSLI 173

Query: 462 ALSEVLKFHGNINTLKLG---WCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCS 517
           AL+ VL  +  + +L L    +  +       +++MLR N+T+  L L  + + D  V  
Sbjct: 174 ALATVLLQNKTLKSLNLNRPIFYVMQEDTTVHLSEMLRVNSTLQELHLSKHEITDFGVQR 233

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
            C+ L   H    +LK++   +L  N +   G K LA+  K +N+ L  +DLA N + DD
Sbjct: 234 LCDALHENH----TLKYL---NLSCNKITRDGVKYLAEVLK-INKTLEILDLASNRMEDD 285

Query: 576 GAFAIAQAL 584
           GA  +A+A+
Sbjct: 286 GALYLAEAI 294



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGIT 203
           K+ R+  + L E  K  +    +D++     D+G  +LAE++  YN++ + +S  +N I+
Sbjct: 253 KITRDGVKYLAEVLKINKTLEILDLASNRMEDDGALYLAEAIYLYNRSLKALSVVSNNIS 312

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD--- 260
             G++A    +++N  L  + + GN I  E       +L   +G  RL  SS D++    
Sbjct: 313 GKGLQALAAAIKANNCLLYIYIWGNKINQEASMAFSQLL--QSG--RLSSSSTDVQPYVV 368

Query: 261 EGAKAIAEL 269
           +G   +AE+
Sbjct: 369 DGRVCLAEI 377


>gi|261326990|emb|CBH09965.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 759

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 47/389 (12%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ +N   K   L  + +G    + +  IL  N     L LS   L DEGA  IA+L
Sbjct: 131 FMELISANCKGKFFCLRESGLGPMSAEAIAHILSSNNKYTILDLSGNRLLDEGACFIAKL 190

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH------LNGNYGGALGANALA 323
           +  N  L  + L +N I + G  +LA+ALLEN+TI SL       +NGN+    GA A+ 
Sbjct: 191 ISVNRTLVHVGLRSNDIGHIGGEALADALLENNTIISLDVGAHSGINGNHIATEGAKAIG 250

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L +L+L  N +G  GI  + SGL   +  L  LDI  N++  +GA  +A+ +
Sbjct: 251 NVLKSNKVLAKLNLGCNGLGHAGISHIASGLDGNES-LTHLDISVNNLGYEGAKIIADVL 309

Query: 384 KNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           ++   +  ++L  N++ D G       IA A++     I  +++  N++ +  A AI +V
Sbjct: 310 ES-SCITHLSLQRNNLTDSGGMVIFRAIAAAVENGEDRIEFLNIESNDLSTNSAKAIQKV 368

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L ++ N  G+  +K + E L  +  + +L +  C+I  +  +     L  N
Sbjct: 369 LTVSSALKQLRISLNCFGS-ASKFILEGLAENKGLKSLHMASCEIRETDGQPFVTGLSTN 427

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            T+  LDL  N LRD                                    C+A++ K  
Sbjct: 428 ATLQHLDLSRNKLRD--------------------------------AATICIAEALK-T 454

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           N+ L S+DL+ N I D+G  AIA  LK+N
Sbjct: 455 NKGLVSLDLSCNNIMDEGGSAIAMFLKSN 483



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 156/356 (43%), Gaps = 42/356 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG---------------------- 201
           ++ +D+SG    DEG  F+A+ +  N+T   V   +N                       
Sbjct: 169 YTILDLSGNRLLDEGACFIAKLISVNRTLVHVGLRSNDIGHIGGEALADALLENNTIISL 228

Query: 202 ------------ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
                       I   G KA   VL+SN  L  LNL  N +G  G+  +   L  N  + 
Sbjct: 229 DVGAHSGINGNHIATEGAKAIGNVLKSNKVLAKLNLGCNGLGHAGISHIASGLDGNESLT 288

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG---FTSLAEALLEN--STI 304
            L +S  +L  EGAK IA++L+++ I  +    NN+ D  G   F ++A A +EN    I
Sbjct: 289 HLDISVNNLGYEGAKIIADVLESSCITHLSLQRNNLTDSGGMVIFRAIAAA-VENGEDRI 347

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             L++  N      A A+ K L  + +L++L +  N  G    + ++ GL+  KG L  L
Sbjct: 348 EFLNIESNDLSTNSAKAIQKVLTVSSALKQLRISLNCFGSAS-KFILEGLAENKG-LKSL 405

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            + +  I           +    +L  ++L  N + D     IA+ALK N+ + ++DL  
Sbjct: 406 HMASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAATICIAEALKTNKGLVSLDLSC 465

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           NNI  +G SAIA  LK NS +  L    N +       L E L+ + ++  + + +
Sbjct: 466 NNIMDEGGSAIAMFLKSNSTLRELRFRRNCMSNVTGDLLDEQLRSNTSLENMDITY 521



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 147/334 (44%), Gaps = 63/334 (18%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  + +G     A+   LSS   K  +LD+  N +  +GA  +A+ I   ++L+ + L  
Sbjct: 146 LRESGLGPMSAEAIAHILSS-NNKYTILDLSGNRLLDEGACFIAKLISVNRTLVHVGLRS 204

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLG------GNNIHSKGASAIARVLKDNSVITSLDL 450
           NDIG  G E +ADAL +N TI ++D+G      GN+I ++GA AI  VLK N V+  L+L
Sbjct: 205 NDIGHIGGEALADALLENNTIISLDVGAHSGINGNHIATEGAKAIGNVLKSNKVLAKLNL 264

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-----------RYNN 499
             N +G  G   ++  L  + ++  L +    +G  GA+ +AD+L           R N 
Sbjct: 265 GCNGLGHAGISHIASGLDGNESLTHLDISVNNLGYEGAKIIADVLESSCITHLSLQRNNL 324

Query: 500 T---------------------ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML-- 536
           T                     I  L++ +N L          +    SA+  L+  L  
Sbjct: 325 TDSGGMVIFRAIAAAVENGEDRIEFLNIESNDLSTNSAKAIQKVLTVSSALKQLRISLNC 384

Query: 537 FYSLCINYLQG------------AKCL-----AQSFKV---VNEALTSIDLAFNEIRDDG 576
           F S     L+G            A C       Q F      N  L  +DL+ N++RD  
Sbjct: 385 FGSASKFILEGLAENKGLKSLHMASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAA 444

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
              IA+ALK N+   + SL+L+ N +   G SA+
Sbjct: 445 TICIAEALKTNK--GLVSLDLSCNNIMDEGGSAI 476



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + +S   FG    F L E L  N+  + +  A+  I     + F   L +N  L+ 
Sbjct: 374 ALKQLRISLNCFGSASKFIL-EGLAENKGLKSLHMASCEIRETDGQPFVTGLSTNATLQH 432

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D    C+ + L  N G+  L LS  ++ DEG  AIA  LK+NS LR L   
Sbjct: 433 LDLSRNKLRDAATICIAEALKTNKGLVSLDLSCNNIMDEGGSAIAMFLKSNSTLRELRFR 492

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALGANA-LAKGLEGNKSL 332
            N +       L E L  N+++ ++ +  N   Y   LG  A LA+  E NK L
Sbjct: 493 RNCMSNVTGDLLDEQLRSNTSLENMDITYNDFRYKCLLGIRATLARNAETNKGL 546


>gi|72386927|ref|XP_843888.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62359016|gb|AAX79465.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70800420|gb|AAZ10329.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 759

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 47/389 (12%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ +N   K   L  + +G    + +  IL  N     L LS   L DEGA  IA+L
Sbjct: 131 FMELISANCKGKFFCLRESGLGPMSAEAIAHILSSNNKYTILDLSGNRLLDEGACFIAKL 190

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH------LNGNYGGALGANALA 323
           +  N  L  + L +N I + G  +LA+ALLEN+TI SL       +NGN+    GA A+ 
Sbjct: 191 ISVNRTLVHVGLRSNDIGHIGGEALADALLENNTIISLDVGAHSGINGNHIATEGAKAIG 250

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L +L+L  N +G  GI  + SGL   +  L  LDI  N++  +GA  +A+ +
Sbjct: 251 NVLKSNKVLAKLNLGCNGLGHAGISHIASGLDGNES-LTHLDISVNNLGYEGAKIIADVL 309

Query: 384 KNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           ++   +  ++L  N++ D G       IA A++     I  +++  N++ +  A AI +V
Sbjct: 310 ES-SCITHLSLQRNNLTDSGGMVIFRAIAAAVENGEDRIEFLNIESNDLSTNSAKAIQKV 368

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L ++ N  G+  +K + E L  +  + +L +  C+I  +  +     L  N
Sbjct: 369 LTVSSALKQLRISLNCFGS-ASKFILEGLAENKGLKSLHMASCEIRETDGQPFVTGLSTN 427

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            T+  LDL  N LRD                                    C+A++ K  
Sbjct: 428 ATLQHLDLSRNKLRD--------------------------------AATICIAEALK-T 454

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           N+ L S+DL+ N I D+G  AIA  LK+N
Sbjct: 455 NKGLVSLDLSCNNIMDEGGSAIAMFLKSN 483



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 157/356 (44%), Gaps = 42/356 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG---------------------- 201
           ++ +D+SG    DEG  F+A+ +  N+T   V   +N                       
Sbjct: 169 YTILDLSGNRLLDEGACFIAKLISVNRTLVHVGLRSNDIGHIGGEALADALLENNTIISL 228

Query: 202 ------------ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
                       I   G KA   VL+SN  L  LNL  N +G  G+  +   L  N  + 
Sbjct: 229 DVGAHSGINGNHIATEGAKAIGNVLKSNKVLAKLNLGCNGLGHAGISHIASGLDGNESLT 288

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG---FTSLAEALLEN--STI 304
            L +S  +L  EGAK IA++L+++ I  +    NN+ D  G   F ++A A +EN    I
Sbjct: 289 HLDISVNNLGYEGAKIIADVLESSCITHLSLQRNNLTDSGGMVIFRAIAAA-VENGEDRI 347

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             L++  N      A A+ K L  + +L++L +  N  G    + ++ GL+  KG L  L
Sbjct: 348 EFLNIESNDLSTNSAKAIQKVLTVSSALKQLRISLNCFGSAS-KFILEGLAENKG-LKSL 405

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            + +  I           +    +L  ++L  N + D     IA+ALK N+ + ++DL  
Sbjct: 406 HMASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAATICIAEALKTNKGLVSLDLSC 465

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           NNI  +G SAIA  LK NS +  L L  N +       L E L+ + ++  + + +
Sbjct: 466 NNIMDEGGSAIAMFLKSNSTLRELRLRRNCMSNVTGDLLDEQLRSNTSLENMDITY 521



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 147/334 (44%), Gaps = 63/334 (18%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  + +G     A+   LSS   K  +LD+  N +  +GA  +A+ I   ++L+ + L  
Sbjct: 146 LRESGLGPMSAEAIAHILSS-NNKYTILDLSGNRLLDEGACFIAKLISVNRTLVHVGLRS 204

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLG------GNNIHSKGASAIARVLKDNSVITSLDL 450
           NDIG  G E +ADAL +N TI ++D+G      GN+I ++GA AI  VLK N V+  L+L
Sbjct: 205 NDIGHIGGEALADALLENNTIISLDVGAHSGINGNHIATEGAKAIGNVLKSNKVLAKLNL 264

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-----------RYNN 499
             N +G  G   ++  L  + ++  L +    +G  GA+ +AD+L           R N 
Sbjct: 265 GCNGLGHAGISHIASGLDGNESLTHLDISVNNLGYEGAKIIADVLESSCITHLSLQRNNL 324

Query: 500 T---------------------ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML-- 536
           T                     I  L++ +N L          +    SA+  L+  L  
Sbjct: 325 TDSGGMVIFRAIAAAVENGEDRIEFLNIESNDLSTNSAKAIQKVLTVSSALKQLRISLNC 384

Query: 537 FYSLCINYLQG------------AKCL-----AQSFKV---VNEALTSIDLAFNEIRDDG 576
           F S     L+G            A C       Q F      N  L  +DL+ N++RD  
Sbjct: 385 FGSASKFILEGLAENKGLKSLHMASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAA 444

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
              IA+ALK N+   + SL+L+ N +   G SA+
Sbjct: 445 TICIAEALKTNK--GLVSLDLSCNNIMDEGGSAI 476



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + +S   FG    F L E L  N+  + +  A+  I     + F   L +N  L+ 
Sbjct: 374 ALKQLRISLNCFGSASKFIL-EGLAENKGLKSLHMASCEIRETDGQPFVTGLSTNATLQH 432

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D    C+ + L  N G+  L LS  ++ DEG  AIA  LK+NS LR L L 
Sbjct: 433 LDLSRNKLRDAATICIAEALKTNKGLVSLDLSCNNIMDEGGSAIAMFLKSNSTLRELRLR 492

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALGANA-LAKGLEGNKSL 332
            N +       L E L  N+++ ++ +  N   Y   LG  A LA+  E NK L
Sbjct: 493 RNCMSNVTGDLLDEQLRSNTSLENMDITYNDFRYKCLLGIRATLARNAETNKGL 546



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 85/190 (44%), Gaps = 30/190 (15%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG------------DEGVKCL-- 238
           E ++  +N ++    KA   VL  + ALK L +S N  G            ++G+K L  
Sbjct: 348 EFLNIESNDLSTNSAKAIQKVLTVSSALKQLRISLNCFGSASKFILEGLAENKGLKSLHM 407

Query: 239 --CDI-----------LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             C+I           L  NA ++ L LS   LRD     IAE LK N  L  L+L+ N 
Sbjct: 408 ASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAATICIAEALKTNKGLVSLDLSCNN 467

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G +++A  L  NST+R L L  N    +  + L + L  N SL  + +  N    +
Sbjct: 468 IMDEGGSAIAMFLKSNSTLRELRLRRNCMSNVTGDLLDEQLRSNTSLENMDITYNDFRYK 527

Query: 346 ---GIRALMS 352
              GIRA ++
Sbjct: 528 CLLGIRATLA 537


>gi|325187206|emb|CCA21746.1| phosphoacetylglucosamine mutase putative [Albugo laibachii Nc14]
          Length = 1285

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 151/295 (51%), Gaps = 30/295 (10%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L+L    L +   K ++ +L  N  LR L+L  N I+  G   LA+AL +N+++  ++L+
Sbjct: 77  LKLGGYSLGNSSTKILSSILFKNQTLRTLDLGFNRINDKGANLLAKALEKNTSLERIYLS 136

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           GN  G  GA+A +K L  N +L+ LHL GN+IG+ G +AL  GL + +  L  L IG N 
Sbjct: 137 GNEIGLAGADAFSKALCTNSTLKTLHLSGNNIGEAGAQALAKGLRTNRC-LRNLYIGTNG 195

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHS 429
           I + G   +   ++N   L  + L  N IG+EG   +A+A K+ +  ITT+++G N+I S
Sbjct: 196 IGSTGMLDIVRALENNTVLQELTLSQNRIGNEGVRHLAEAFKRGKLHITTLEIGKNDIGS 255

Query: 430 KGASAIARVLK--------DNSVITSLDLAYNPIGADGAKALSEV----------LKFHG 471
           +GA  +A  L+        D+   TS  L      A    A SEV          ++   
Sbjct: 256 RGAELLADALQQVQIDAEGDSEGSTSEVLVGEQDDAREGNA-SEVSISNSCQEKSMEART 314

Query: 472 NINTLKLGWCQ---IGASGAEFVADMLRYNNTISILDLRAN-----GLRDEVCSG 518
           N N L+  +     IG +GA+    ML  N+T+ +LDL        GLR E+C G
Sbjct: 315 NRNQLQNLYIDNNPIGDAGAQAFGKMLGKNHTLRVLDLSYTQMSLLGLR-ELCIG 368



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 20/279 (7%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           +  K    +L  N  L+TL+L  N I D+G   L   L  N  +ER+ LS  ++   GA 
Sbjct: 87  SSTKILSSILFKNQTLRTLDLGFNRINDKGANLLAKALEKNTSLERIYLSGNEIGLAGAD 146

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A ++ L  NS L+ L L+ N I  +G  +LA+ L  N  +R+L++  N  G+ G   + +
Sbjct: 147 AFSKALCTNSTLKTLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTNGIGSTGMLDIVR 206

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            LE N  L+EL L  N IG+EG+R L       K  +  L+IG N I ++GA  +A+ ++
Sbjct: 207 ALENNTVLQELTLSQNRIGNEGVRHLAEAFKRGKLHITTLEIGKNDIGSRGAELLADALQ 266

Query: 385 NCK---------SLLWINLYMNDIGDEG-----------AEKIADALKQNRTITTIDLGG 424
             +         S   + +   D   EG            EK  +A      +  + +  
Sbjct: 267 QVQIDAEGDSEGSTSEVLVGEQDDAREGNASEVSISNSCQEKSMEARTNRNQLQNLYIDN 326

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           N I   GA A  ++L  N  +  LDL+Y  +   G + L
Sbjct: 327 NPIGDAGAQAFGKMLGKNHTLRVLDLSYTQMSLLGLREL 365



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 125/308 (40%), Gaps = 50/308 (16%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   ++D+      D+G   LA++L  N + E +  + N I  AG  AF   L +N  LK
Sbjct: 100 QTLRTLDLGFNRINDKGANLLAKALEKNTSLERIYLSGNEIGLAGADAFSKALCTNSTLK 159

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL+LSGN IG+ G + L   L  N  +  L + +  +   G   I   L+NN++L+ L L
Sbjct: 160 TLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTNGIGSTGMLDIVRALENNTVLQELTL 219

Query: 282 NNNMIDYSGFTSLAEALLENS-TIRSLHLNGNYGGALGANALAKGL-------------- 326
           + N I   G   LAEA       I +L +  N  G+ GA  LA  L              
Sbjct: 220 SQNRIGNEGVRHLAEAFKRGKLHITTLEIGKNDIGSRGAELLADALQQVQIDAEGDSEGS 279

Query: 327 -------------EGNKS---------------------LRELHLHGNSIGDEGIRALMS 352
                        EGN S                     L+ L++  N IGD G +A   
Sbjct: 280 TSEVLVGEQDDAREGNASEVSISNSCQEKSMEARTNRNQLQNLYIDNNPIGDAGAQAFGK 339

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L  +   L VLD+    +S  G   +   I+  +SLL + L  +D       K A  L 
Sbjct: 340 MLG-KNHTLRVLDLSYTQMSLLGLRELCIGIRTSRSLLCLLLDGHDWSSTKYMKKAHPLL 398

Query: 413 QNRTITTI 420
           Q   + ++
Sbjct: 399 QQSILLSV 406



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 102/189 (53%), Gaps = 8/189 (4%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G+   + ++  L +N+T+ T+DLG N I+ KGA+ +A+ L+ N+ +  + L+ N IG  
Sbjct: 84  LGNSSTKILSSILFKNQTLRTLDLGFNRINDKGANLLAKALEKNTSLERIYLSGNEIGLA 143

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA A S+ L  +  + TL L    IG +GA+ +A  LR N  +  L +  NG+      G
Sbjct: 144 GADAFSKALCTNSTLKTLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTNGI------G 197

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
             G+     A+ +   +   +L  N +  +G + LA++FK     +T++++  N+I   G
Sbjct: 198 STGMLDIVRALENNTVLQELTLSQNRIGNEGVRHLAEAFKRGKLHITTLEIGKNDIGSRG 257

Query: 577 AFAIAQALK 585
           A  +A AL+
Sbjct: 258 AELLADALQ 266


>gi|46447245|ref|YP_008610.1| hypothetical protein pc1611 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400886|emb|CAF24335.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1594

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 118/230 (51%), Gaps = 1/230 (0%)

Query: 238  LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
            L  + ++++ +  L LS   + D+ A+ IA  L  N+ L  L LNNN I   G  +LA A
Sbjct: 1348 LFQLYMNDSRLTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALARA 1407

Query: 298  LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L  N+TI+ L L  N     GA AL + L  N +L  L L  N I ++G+ A    L+S 
Sbjct: 1408 LTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASN 1467

Query: 358  KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
               L  L +  N IS KG   +A  +    +L  ++L  N I D G E +A AL  N  +
Sbjct: 1468 TA-LRKLYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTAL 1526

Query: 418  TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             TI L  N I  KG  A+AR L  N+ +T+L L  N I   G KAL++VL
Sbjct: 1527 RTIYLNRNLISDKGMEALARALASNTALTTLSLNGNLISDKGMKALAKVL 1576



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 108/194 (55%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A S + ++     D G+  LA +L +N T +++   +N I+  G +A   VL SN AL T
Sbjct: 1385 ALSFLRLNNNQISDRGVEALARALTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMT 1444

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L  N I ++GV+     L  N  + +L L+   + D+G + +A  L  N+ L  L+L+
Sbjct: 1445 LSLRENLISNKGVEAFAQALASNTALRKLYLNGNQISDKGMETLARALTPNTTLESLDLD 1504

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N I   G  +LA AL+ N+ +R+++LN N     G  ALA+ L  N +L  L L+GN I
Sbjct: 1505 RNQISDRGVEALAIALVSNTALRTIYLNRNLISDKGMEALARALASNTALTTLSLNGNLI 1564

Query: 343  GDEGIRALMSGLSS 356
             D+G++AL   L+S
Sbjct: 1565 SDKGMKALAKVLAS 1578



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 119/226 (52%), Gaps = 1/226 (0%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            L +L+LS   I D+  + + + L  N  +  L+L++  + D G +A+A  L  N+ ++ L
Sbjct: 1358 LTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALARALTFNTTIKQL 1417

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I   G  +L   L  N+ + +L L  N     G  A A+ L  N +LR+L+L+G
Sbjct: 1418 WLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASNTALRKLYLNG 1477

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N I D+G+  L   L+     L  LD+  N IS +G   +A  + +  +L  I L  N I
Sbjct: 1478 NQISDKGMETLARALTP-NTTLESLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLI 1536

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             D+G E +A AL  N  +TT+ L GN I  KG  A+A+VL  N+ +
Sbjct: 1537 SDKGMEALARALASNTALTTLSLNGNLISDKGMKALAKVLASNTAL 1582



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 3/232 (1%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             +S+D+S R   D+    +A  L +N     +    N I+  G++A    L  N  +K L
Sbjct: 1358 LTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALARALTFNTTIKQL 1417

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             L  N I D G + L  +L  N  +  L L    + ++G +A A+ L +N+ LR L LN 
Sbjct: 1418 WLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASNTALRKLYLNG 1477

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N I   G  +LA AL  N+T+ SL L+ N     G  ALA  L  N +LR ++L+ N I 
Sbjct: 1478 NQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLIS 1537

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWIN 393
            D+G+ AL   L+S    L  L +  N IS KG   +A+ + +  +L   W+N
Sbjct: 1538 DKGMEALARALASNTA-LTTLSLNGNLISDKGMKALAKVLASNTALKKFWLN 1588



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 90/174 (51%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
            +      D G   L   L  N     +S   N I+  G++AF   L SN AL+ L L+GN
Sbjct: 1419 LESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASNTALRKLYLNGN 1478

Query: 229  PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
             I D+G++ L   L  N  +E L L    + D G +A+A  L +N+ LR + LN N+I  
Sbjct: 1479 QISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLISD 1538

Query: 289  SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             G  +LA AL  N+ + +L LNGN     G  ALAK L  N +L++  L+G+ I
Sbjct: 1539 KGMEALARALASNTALTTLSLNGNLISDKGMKALAKVLASNTALKKFWLNGDLI 1592



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 1/234 (0%)

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            +L  N+S L  L+L+   I       +A  L  N+ +  L LN N     G  ALA+ L 
Sbjct: 1350 QLYMNDSRLTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALARALT 1409

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             N ++++L L  N I D G  AL   L+S    L  L +  N IS KG    A+ + +  
Sbjct: 1410 FNTTIKQLWLESNQISDRGAEALTRVLASNTA-LMTLSLRENLISNKGVEAFAQALASNT 1468

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            +L  + L  N I D+G E +A AL  N T+ ++DL  N I  +G  A+A  L  N+ + +
Sbjct: 1469 ALRKLYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTALRT 1528

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
            + L  N I   G +AL+  L  +  + TL L    I   G + +A +L  N  +
Sbjct: 1529 IYLNRNLISDKGMEALARALASNTALTTLSLNGNLISDKGMKALAKVLASNTAL 1582



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 116/263 (44%), Gaps = 35/263 (13%)

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            R  +  L     +L  LD+    IS K A  +A  +    +L ++ L  N I D G E +
Sbjct: 1345 RTQLFQLYMNDSRLTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEAL 1404

Query: 408  ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            A AL  N TI  + L  N I  +GA A+ RVL  N+ + +L L  N I   G +A ++ L
Sbjct: 1405 ARALTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQAL 1464

Query: 468  KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
              +  +  L L   QI   G E +A  L  N T+  LDL  N + D              
Sbjct: 1465 ASNTALRKLYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISD-------------- 1510

Query: 528  AIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
                              +G + LA +  V N AL +I L  N I D G  A+A+AL +N
Sbjct: 1511 ------------------RGVEALAIAL-VSNTALRTIYLNRNLISDKGMEALARALASN 1551

Query: 588  EDVAVTSLNLANNFLTKFGQSAL 610
               A+T+L+L  N ++  G  AL
Sbjct: 1552 --TALTTLSLNGNLISDKGMKAL 1572



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 69/124 (55%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A   + ++G    D+G+  LA +L  N T E +    N I+  G++A    L SN AL+T
Sbjct: 1469 ALRKLYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTALRT 1528

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            + L+ N I D+G++ L   L  N  +  L L+   + D+G KA+A++L +N+ L+   LN
Sbjct: 1529 IYLNRNLISDKGMEALARALASNTALTTLSLNGNLISDKGMKALAKVLASNTALKKFWLN 1588

Query: 283  NNMI 286
             ++I
Sbjct: 1589 GDLI 1592


>gi|326432350|gb|EGD77920.1| hypothetical protein PTSG_12898 [Salpingoeca sp. ATCC 50818]
          Length = 1415

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 136/286 (47%), Gaps = 33/286 (11%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           ++L  N I D G   L D+L  N  +  L+L    + D GA AIAE+L +N  L +LELN
Sbjct: 509 VDLCNNRISDMGATALADMLNTNTHLRELRLHDNRIGDFGATAIAEMLASNKSLEILELN 568

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN I  SG  ++  +L  N+ +R L L GN        AL   L+ N++LR+L+L GN +
Sbjct: 569 NNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRL 628

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G +G RA+  GL +                   A H        K +L  NL    IGDE
Sbjct: 629 GPQGGRAVGEGLVTNL-----------------ALH--------KLILDDNL----IGDE 659

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + I +ALK N ++  + L  N +      AI   L  N+++  L L  N +G  G  A
Sbjct: 660 AGQAIGNALKHNMSLAKLHLKNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVGGHA 719

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVA----DMLRYNNTISIL 504
           L E L+ + +I+ L L     GA G E +A    D+     TI+ L
Sbjct: 720 LGEGLQRNTSIHILGLHNSGFGARGLEGLAAGLEDVFSQRRTIAKL 765



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 99/193 (51%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++   ++++    GD G   +  SL  N    E+    N +     +A    L+ N AL+
Sbjct: 560 KSLEILELNNNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALR 619

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL GN +G +G + + + LV N  + +L L    + DE  +AI   LK+N  L  L L
Sbjct: 620 KLNLKGNRLGPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIGNALKHNMSLAKLHL 679

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            NN +      ++ EALL N+ +R LHL+ N  G +G +AL +GL+ N S+  L LH + 
Sbjct: 680 KNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVGGHALGEGLQRNTSIHILGLHNSG 739

Query: 342 IGDEGIRALMSGL 354
            G  G+  L +GL
Sbjct: 740 FGARGLEGLAAGL 752



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 6/260 (2%)

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           Q+ S  ++D+    I EL K  +   +++L NN I   G T+LA+ L  N+ +R L L+ 
Sbjct: 487 QIKSKRVQDQ----IMELWKGTNPT-LVDLCNNRISDMGATALADMLNTNTHLRELRLHD 541

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G  GA A+A+ L  NKSL  L L+ N IGD G RA+ + L+     L  LD+  N +
Sbjct: 542 NRIGDFGATAIAEMLASNKSLEILELNNNQIGDSGGRAICASLAGNTA-LRELDLRGNRL 600

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
                  +   +K  ++L  +NL  N +G +G   + + L  N  +  + L  N I  + 
Sbjct: 601 RGDAGRALGTALKENRALRKLNLKGNRLGPQGGRAVGEGLVTNLALHKLILDDNLIGDEA 660

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
             AI   LK N  +  L L  N +G     A+ E L  +  +  L L   ++G  G   +
Sbjct: 661 GQAIGNALKHNMSLAKLHLKNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVGGHAL 720

Query: 492 ADMLRYNNTISILDLRANGL 511
            + L+ N +I IL L  +G 
Sbjct: 721 GEGLQRNTSIHILGLHNSGF 740



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 114/258 (44%), Gaps = 5/258 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+      D G   LA+ L  N    E+    N I   G  A   +L SN +L+ L L+
Sbjct: 509 VDLCNNRISDMGATALADMLNTNTHLRELRLHDNRIGDFGATAIAEMLASNKSLEILELN 568

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + +C  L  N  +  L L    LR +  +A+   LK N  LR L L  N +
Sbjct: 569 NNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRL 628

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  ++ E L+ N  +  L L+ N  G     A+   L+ N SL +LHL  N +G+  
Sbjct: 629 GPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIGNALKHNMSLAKLHLKNNRLGELA 688

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A+   L  R   L  L + NN +   G   + E ++   S+  + L+ +  G  G E 
Sbjct: 689 GYAIGEAL-LRNTILRELHLDNNRLGDVGGHALGEGLQRNTSIHILGLHNSGFGARGLEG 747

Query: 407 IA----DALKQNRTITTI 420
           +A    D   Q RTI  +
Sbjct: 748 LAAGLEDVFSQRRTIAKL 765



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 7/221 (3%)

Query: 155 NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           N   +ELR      +     GD G   +AE L  N++ E +    N I  +G +A    L
Sbjct: 531 NTHLRELR------LHDNRIGDFGATAIAEMLASNKSLEILELNNNQIGDSGGRAICASL 584

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
             N AL+ L+L GN +  +  + L   L +N  + +L L    L  +G +A+ E L  N 
Sbjct: 585 AGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRLGPQGGRAVGEGLVTNL 644

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L++N+I      ++  AL  N ++  LHL  N  G L   A+ + L  N  LRE
Sbjct: 645 ALHKLILDDNLIGDEAGQAIGNALKHNMSLAKLHLKNNRLGELAGYAIGEALLRNTILRE 704

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           LHL  N +GD G  AL  GL  R   + +L + N+   A+G
Sbjct: 705 LHLDNNRLGDVGGHALGEGL-QRNTSIHILGLHNSGFGARG 744



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           ++D+ NN IS  GA  +A+ +     L  + L+ N IGD GA  IA+ L  N+++  ++L
Sbjct: 508 LVDLCNNRISDMGATALADMLNTNTHLRELRLHDNRIGDFGATAIAEMLASNKSLEILEL 567

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   G  AI   L  N+ +  LDL  N +  D  +AL   LK +  +  L L   +
Sbjct: 568 NNNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNR 627

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           +G  G   V + L  N  +  L L  N + DE                +LKH +  SL  
Sbjct: 628 LGPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIGN---------ALKHNM--SLAK 676

Query: 543 NYLQGAKCLAQSFKVVNEA------LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
            +L+  +    +   + EA      L  + L  N + D G  A+ + L+ N  + +  L+
Sbjct: 677 LHLKNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVGGHALGEGLQRNTSIHILGLH 736


>gi|421897032|ref|ZP_16327415.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
 gi|206588197|emb|CAQ18765.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
          Length = 625

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 214/462 (46%), Gaps = 84/462 (18%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + +S+ ++G + GD     LA+S    ++   +  + N I   G +A      ++  L +
Sbjct: 212 SLTSLSLTGCSIGDRAATALAQS----RSIASLDLSVNMIGPDGARAL-----ASAPLLS 262

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGDEG   L      +  ++ L  S+  + D G    A+    N++L  L L 
Sbjct: 263 LNLHNNGIGDEGALALAT----SGTLKSLNASNNGIGDAGVLGFAD----NTVLTQLNLA 314

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            NMI  +G    A AL  N+++  L L+ N  G  GA  LA    G++SL  L+L  N I
Sbjct: 315 GNMIGPAG----ARALRRNTSLTELDLSTNRLGDAGAQVLA----GSRSLTSLNLRHNEI 366

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV--------------------AEY 382
           GD+G  AL     +R   L  L++  N I   GA  +                    A  
Sbjct: 367 GDDGTEAL-----ARNTTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASA 421

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +    SL  ++L  N IGD+GA     AL  +RT+T +DL  NNIH  GA A+A     N
Sbjct: 422 LARNTSLASLHLGSNRIGDDGAR----ALATSRTLTLLDLSRNNIHDAGAQALA----GN 473

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +TSL+L  N +  DGA AL++    H  + +L LG  +IG +GA+ +A     + T++
Sbjct: 474 GSLTSLNLYGNEVDDDGAAALAQ----HPRLTSLNLGRNRIGPNGAQHLA----KSATLT 525

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            LDL  N +  E   G   LS            +  +L ++     +  A++F   + +L
Sbjct: 526 ELDLSENRIGPE---GAEALSL---------STVLTTLNVSGNAIGEKGARAFAEKSTSL 573

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           TS+D A N  R +   A A+ L+AN  +  T  N   NFL +
Sbjct: 574 TSLD-ARNNRRGE---AGAKMLEANTRLTGTQQN--PNFLAE 609


>gi|307150010|ref|YP_003885394.1| leucine-rich repeat, ribonuclease inhibitor subtype [Cyanothece sp.
           PCC 7822]
 gi|306980238|gb|ADN12119.1| leucine-rich repeat, ribonuclease inhibitor subtype [Cyanothece sp.
           PCC 7822]
          Length = 388

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 151/292 (51%), Gaps = 17/292 (5%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    IG  G + + D+L  N  V  L L +  + D GA A+A+L+++NS L V+ L 
Sbjct: 55  LDLCKQGIGVTGCQQITDVLRANTTVISLLLGTDGIGDVGASAVAKLIQHNSHLEVVYLG 114

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G   LA AL  N+++  L L  N  G +GA  LA+ L  NKS+R L L    +
Sbjct: 115 CNQITKKGAAQLAAALSLNTSVTGLWLKRNPIGRIGAEYLAEMLSINKSIRTLDLVNTHL 174

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            + G+  ++  L  +   +  L +G N I  + A  ++  +K   ++ ++ L +N +GD 
Sbjct: 175 EETGLNRILDVLIDKNRTVERLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNVNHLGDV 234

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA ++AD L+QN T+  + +  N I S G  AI   ++ +  + +LDL Y+P        
Sbjct: 235 GAIELADGLRQNSTLIELGVASNGITSTGGMAILEAIEGHPSLVNLDLGYSPS------- 287

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            ++VL    N          +GA+GAE V  +L  ++ +  L+LR NG+ ++
Sbjct: 288 -TQVLAARAN---------SLGAAGAERVGKLLANDSNLLRLNLRGNGITEQ 329



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 120/264 (45%), Gaps = 15/264 (5%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +A+ + +N   E V    N IT  G       L  N ++  L L  NPIG  
Sbjct: 90  IGDVGASAVAKLIQHNSHLEVVYLGCNQITKKGAAQLAAALSLNTSVTGLWLKRNPIGRI 149

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL--KNNSILRVLELNNNMIDYSGF 291
           G + L ++L  N  +  L L +  L + G   I ++L  KN ++ R L L  N I     
Sbjct: 150 GAEYLAEMLSINKSIRTLDLVNTHLEETGLNRILDVLIDKNRTVER-LYLGGNQIYDQAA 208

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             L+  L  N  I+ L LN N+ G +GA  LA GL  N +L EL +  N I   G  A++
Sbjct: 209 KRLSMLLKTNPNIKYLFLNVNHLGDVGAIELADGLRQNSTLIELGVASNGITSTGGMAIL 268

Query: 352 SGLSSRKGKLAVLDIG-----------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             +      L  LD+G            NS+ A GA  V + + N  +LL +NL  N I 
Sbjct: 269 EAIEGHP-SLVNLDLGYSPSTQVLAARANSLGAAGAERVGKLLANDSNLLRLNLRGNGIT 327

Query: 401 DEGAEKIADALKQNRTITTIDLGG 424
           ++G   I + L++N  +  + L G
Sbjct: 328 EQGKMAIIEGLEKNYRLQHLILDG 351



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 13/296 (4%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+  +  G  G   + + L  N T   +    +GI   G  A   ++Q N  L+ + L 
Sbjct: 55  LDLCKQGIGVTGCQQITDVLRANTTVISLLLGTDGIGDVGASAVAKLIQHNSHLEVVYLG 114

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  +G   L   L  N  V  L L    +   GA+ +AE+L  N  +R L+L N  +
Sbjct: 115 CNQITKKGAAQLAAALSLNTSVTGLWLKRNPIGRIGAEYLAEMLSINKSIRTLDLVNTHL 174

Query: 287 DYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + +G   + + L++ N T+  L+L GN      A  L+  L+ N +++ L L+ N +GD 
Sbjct: 175 EETGLNRILDVLIDKNRTVERLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNVNHLGDV 234

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL----------- 394
           G   L  GL  +   L  L + +N I++ G   + E I+   SL+ ++L           
Sbjct: 235 GAIELADGL-RQNSTLIELGVASNGITSTGGMAILEAIEGHPSLVNLDLGYSPSTQVLAA 293

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             N +G  GAE++   L  +  +  ++L GN I  +G  AI   L+ N  +  L L
Sbjct: 294 RANSLGAAGAERVGKLLANDSNLLRLNLRGNGITEQGKMAIIEGLEKNYRLQHLIL 349



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 22/287 (7%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G   +   L  N ++  L L  + IGD G  A ++ L      L V+ +G N I+ K
Sbjct: 63  GVTGCQQITDVLRANTTVISLLLGTDGIGDVGASA-VAKLIQHNSHLEVVYLGCNQITKK 121

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A  +    S+  + L  N IG  GAE +A+ L  N++I T+DL   ++   G + 
Sbjct: 122 GAAQLAAALSLNTSVTGLWLKRNPIGRIGAEYLAEMLSINKSIRTLDLVNTHLEETGLNR 181

Query: 435 IARVLKD-NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           I  VL D N  +  L L  N I    AK LS +LK + NI  L L    +G  GA  +AD
Sbjct: 182 ILDVLIDKNRTVERLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNVNHLGDVGAIELAD 241

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFF-----HSAIYSLKHMLFYSLCINYLQ-- 546
            LR N+T+  L + +NG+     +   G++       H ++ +L   L YS     L   
Sbjct: 242 GLRQNSTLIELGVASNGI-----TSTGGMAILEAIEGHPSLVNLD--LGYSPSTQVLAAR 294

Query: 547 ----GAKCLAQSFKVV--NEALTSIDLAFNEIRDDGAFAIAQALKAN 587
               GA    +  K++  +  L  ++L  N I + G  AI + L+ N
Sbjct: 295 ANSLGAAGAERVGKLLANDSNLLRLNLRGNGITEQGKMAIIEGLEKN 341



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 38/244 (15%)

Query: 374 KGAFHVAEYIKNCKSLLW----INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           +G   V E ++  +  +     ++L    IG  G ++I D L+ N T+ ++ LG + I  
Sbjct: 33  QGNIPVTEPVRFPRGTMMPDGRLDLCKQGIGVTGCQQITDVLRANTTVISLLLGTDGIGD 92

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GASA+A++++ NS +  + L  N I   GA  L+  L  + ++  L L    IG  GAE
Sbjct: 93  VGASAVAKLIQHNSHLEVVYLGCNQITKKGAAQLAAALSLNTSVTGLWLKRNPIGRIGAE 152

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK 549
           ++A+ML  N +I  LDL    L +       GL+     +                    
Sbjct: 153 YLAEMLSINKSIRTLDLVNTHLEE------TGLNRILDVLID------------------ 188

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
                    N  +  + L  N+I D  A  ++  LK N ++    LN+  N L   G   
Sbjct: 189 --------KNRTVERLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNV--NHLGDVGAIE 238

Query: 610 LTDA 613
           L D 
Sbjct: 239 LADG 242



 Score = 42.4 bits (98), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 24/174 (13%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVD-------MSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
           +L+    Q  ++ AK L      +       ++  + GD G   LA+ L  N T  E+  
Sbjct: 195 RLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNVNHLGDVGAIELADGLRQNSTLIELGV 254

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
           A+NGIT+ G  A    ++ + +L  L+L  +P                   + L   +  
Sbjct: 255 ASNGITSTGGMAILEAIEGHPSLVNLDLGYSP-----------------STQVLAARANS 297

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           L   GA+ + +LL N+S L  L L  N I   G  ++ E L +N  ++ L L+G
Sbjct: 298 LGAAGAERVGKLLANDSNLLRLNLRGNGITEQGKMAIIEGLEKNYRLQHLILDG 351


>gi|320169287|gb|EFW46186.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 439

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 125/237 (52%), Gaps = 6/237 (2%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K  +L    IGD G + + + L  NA + RL L    + D GA+AIAE L  N+ L  L 
Sbjct: 27  KWFDLIHRRIGDAGAQVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTLITLS 86

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I  +G  ++AEAL  N T+ +L L  N  G  G  A+A+ L+ + +L  L L  N
Sbjct: 87  LEKNPIGDAGTKAIAEALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLTRLQLQKN 146

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G +A+ + L      L  L++G N I   GA  +AE +K  K+L W++L  N IG
Sbjct: 147 QIGDAGAQAIAAALRVNT-SLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQNLIG 205

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT--SLDLAYNPI 455
           D GA+ IA+ L++N T+T +    N I   GA AI         +T  S+D   NP+
Sbjct: 206 DAGAKAIAEGLRENTTVTRLQ---NRIGYDGAQAIDDARNATKALTYCSIDNQINPL 259



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 128/242 (52%), Gaps = 18/242 (7%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           W +L    IGD GA+ IA+ LK+N T+  + L  + I   GA AIA  L  N+ + +L L
Sbjct: 28  WFDLIHRRIGDAGAQVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTLITLSL 87

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             NPIG  G KA++E LK +  + TL LG  QIG +G + +A+ L+ + T++ L L+ N 
Sbjct: 88  EKNPIGDAGTKAIAEALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLTRLQLQKNQ 147

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLA 568
           + D            ++++  L      +L +N +   GA+ +A++ KV N+ L  +DL 
Sbjct: 148 IGDAGAQAIAAALRVNTSLTEL------NLGLNQIGDVGAQAIAEALKV-NKTLAWLDLG 200

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD----LVYEMSEKE 624
            N I D GA AIA+ L+ N     T++    N +   G  A+ DA++    L Y   + +
Sbjct: 201 QNLIGDAGAKAIAEGLREN-----TTVTRLQNRIGYDGAQAIDDARNATKALTYCSIDNQ 255

Query: 625 VN 626
           +N
Sbjct: 256 IN 257



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS  +  +L +  I  +G   +AE L  N+T+  L L  +  G  GA A+A+ L  N +L
Sbjct: 23  NSEGKWFDLIHRRIGDAGAQVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTL 82

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L  N IGD G +A+   L      LA L +G N I   G   +AE +K   +L  +
Sbjct: 83  ITLSLEKNPIGDAGTKAIAEALKVNL-TLATLLLGENQIGDAGVQAIAETLKVSTTLTRL 141

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N IGD GA+ IA AL+ N ++T ++LG N I   GA AIA  LK N  +  LDL  
Sbjct: 142 QLQKNQIGDAGAQAIAAALRVNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQ 201

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           N IG  GAKA++E L+ +  +  L+    +IG  GA+ + D
Sbjct: 202 NLIGDAGAKAIAEGLRENTTVTRLQ---NRIGYDGAQAIDD 239



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 99/187 (52%)

Query: 168 DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           D+  R  GD G   +AE L  N T   +    + I  AG +A    L  N  L TL+L  
Sbjct: 30  DLIHRRIGDAGAQVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTLITLSLEK 89

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           NPIGD G K + + L  N  +  L L    + D G +AIAE LK ++ L  L+L  N I 
Sbjct: 90  NPIGDAGTKAIAEALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLTRLQLQKNQIG 149

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
            +G  ++A AL  N+++  L+L  N  G +GA A+A+ L+ NK+L  L L  N IGD G 
Sbjct: 150 DAGAQAIAAALRVNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQNLIGDAGA 209

Query: 348 RALMSGL 354
           +A+  GL
Sbjct: 210 KAIAEGL 216



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 1/193 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA  +A+ L+ N +L  L L  + IGD G RA+   L+     L  L +  N I   
Sbjct: 37  GDAGAQVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNT-TLITLSLEKNPIGDA 95

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   +AE +K   +L  + L  N IGD G + IA+ LK + T+T + L  N I   GA A
Sbjct: 96  GTKAIAEALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLTRLQLQKNQIGDAGAQA 155

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  L+ N+ +T L+L  N IG  GA+A++E LK +  +  L LG   IG +GA+ +A+ 
Sbjct: 156 IAAALRVNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQNLIGDAGAKAIAEG 215

Query: 495 LRYNNTISILDLR 507
           LR N T++ L  R
Sbjct: 216 LRENTTVTRLQNR 228



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 1/187 (0%)

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           E N   +   L    IGD G + +   L  R   LA L +  + I   GA  +AE +   
Sbjct: 21  EMNSEGKWFDLIHRRIGDAGAQVIAEELK-RNATLARLGLIESQIGDAGARAIAEALTVN 79

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            +L+ ++L  N IGD G + IA+ALK N T+ T+ LG N I   G  AIA  LK ++ +T
Sbjct: 80  TTLITLSLEKNPIGDAGTKAIAEALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLT 139

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            L L  N IG  GA+A++  L+ + ++  L LG  QIG  GA+ +A+ L+ N T++ LDL
Sbjct: 140 RLQLQKNQIGDAGAQAIAAALRVNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDL 199

Query: 507 RANGLRD 513
             N + D
Sbjct: 200 GQNLIGD 206



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 100/199 (50%), Gaps = 3/199 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     GD G   +AE+L  N T   +S   N I  AG KA  
Sbjct: 42  QVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTLITLSLEKNPIGDAGTKAIA 101

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N+ L TL L  N IGD GV+ + + L  +  + RLQL    + D GA+AIA  L+
Sbjct: 102 EALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLTRLQLQKNQIGDAGAQAIAAALR 161

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L L  N I   G  ++AEAL  N T+  L L  N  G  GA A+A+GL  N +
Sbjct: 162 VNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQNLIGDAGAKAIAEGLRENTT 221

Query: 332 LRELHLHGNSIGDEGIRAL 350
           +  L    N IG +G +A+
Sbjct: 222 VTRLQ---NRIGYDGAQAI 237


>gi|443732119|gb|ELU16968.1| hypothetical protein CAPTEDRAFT_151888 [Capitella teleta]
          Length = 373

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 7/298 (2%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + D   + +   L +N  V  L L   ++ D G+K IA+LL+  + L  L L NN I   
Sbjct: 17  LDDAQAEIIYKWLRNNIFVTALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEE 76

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A+ALL+N T++ L ++GN  G  G    A+ L+ N +L EL L    +  + + A
Sbjct: 77  GAKDIAQALLKNETLKKLRMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIA 136

Query: 350 LMSGLSSRKGKLAVLDIGNNSI----SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           L + L +    L  L+  N  I      +   H A  +K  +SL  ++L   D+ D G  
Sbjct: 137 LATVLRA-NSTLKSLN-ANRPILFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGIT 194

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           ++++ L  N T+T ++L  N I   GA  ++++L+ ++ +  +DL++N +G DGA  ++E
Sbjct: 195 RLSEKLVDNMTLTYLNLSCNRITRDGAKELSKLLRKDTALKVIDLSFNRLGDDGAIDIAE 254

Query: 466 VL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
            L  F+ N+ TL +   +I A G   +A+ L+ N+T+  + +  N L +  C    GL
Sbjct: 255 ALMTFNTNLQTLVITSNEIRAKGLCALANALQMNSTLDNIYIWGNCLEEPACIAFAGL 312



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 133/285 (46%), Gaps = 27/285 (9%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +++D+   N  D G   +A+ L    T EE++   N I   G K     L  N  LK L 
Sbjct: 36  TALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEEGAKDIAQALLKNETLKKLR 95

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           +SGN IG +G  C    L  N  +E L L   DL  +   A+A +L+ NS L+ L  N  
Sbjct: 96  MSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRANSTLKSLNANRP 155

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++    F+   E         ++H              A  L+ N+SL+ELHL    + D
Sbjct: 156 IL----FSHQEET--------TVH-------------FANMLKVNRSLKELHLMKYDMRD 190

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            GI  L   L      L  L++  N I+  GA  +++ ++   +L  I+L  N +GD+GA
Sbjct: 191 FGITRLSEKLVDNM-TLTYLNLSCNRITRDGAKELSKLLRKDTALKVIDLSFNRLGDDGA 249

Query: 405 EKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             IA+AL   N  + T+ +  N I +KG  A+A  L+ NS + ++
Sbjct: 250 IDIAEALMTFNTNLQTLVITSNEIRAKGLCALANALQMNSTLDNI 294



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 12/229 (5%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +  LD+  N+I+  G+ H+A+ ++   +L  +NL  NDIG+EGA+ IA AL +N T+  +
Sbjct: 35  VTALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEEGAKDIAQALLKNETLKKL 94

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            + GN I  KG    A+ L+ N+ +  LDL    +  D   AL+ VL+ +  + +L    
Sbjct: 95  RMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRANSTLKSLNANR 154

Query: 481 CQIGASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
             + +   E     A+ML+ N ++  L L    +RD       G++     +     + +
Sbjct: 155 PILFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDF------GITRLSEKLVDNMTLTY 208

Query: 538 YSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
            +L  N +   GAK L++  +  + AL  IDL+FN + DDGA  IA+AL
Sbjct: 209 LNLSCNRITRDGAKELSKLLR-KDTALKVIDLSFNRLGDDGAIDIAEAL 256



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 36/320 (11%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           +E      +++   + G+EG   +A++L  N+T                           
Sbjct: 58  EETATLEELNLMNNDIGEEGAKDIAQALLKNET--------------------------- 90

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK L +SGN IG +G  C    L  N  +E L L   DL  +   A+A +L+ NS L+ 
Sbjct: 91  -LKKLRMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRANSTLKS 149

Query: 279 LELNNNMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  N  ++           A  L  N +++ LHL        G   L++ L  N +L  L
Sbjct: 150 LNANRPILFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGITRLSEKLVDNMTLTYL 209

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINL 394
           +L  N I  +G + L S L  +   L V+D+  N +   GA  +AE +    + L  + +
Sbjct: 210 NLSCNRITRDGAKEL-SKLLRKDTALKVIDLSFNRLGDDGAIDIAEALMTFNTNLQTLVI 268

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+I  +G   +A+AL+ N T+  I + GN +      A A ++ D+  I   +    P
Sbjct: 269 TSNEIRAKGLCALANALQMNSTLDNIYIWGNCLEEPACIAFAGLI-DSGRIALKNTDVEP 327

Query: 455 IGADGAKALSEVLKFHGNIN 474
              DG   LSE+   HG  N
Sbjct: 328 YVVDGTTYLSEL--NHGTRN 345



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 65/313 (20%)

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTI 304
           AG  +L +++V L D  A+ I + L+NN  +  L+L  NN+ D                 
Sbjct: 6   AGNNKL-ITNVRLDDAQAEIIYKWLRNNIFVTALDLRYNNITD----------------- 47

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                       +G+  +AK LE   +L EL+L  N IG+EG + +   L  +   L  L
Sbjct: 48  ------------VGSKHIAKLLEETATLEELNLMNNDIGEEGAKDIAQAL-LKNETLKKL 94

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG------------------------ 400
            +  N I  KG    A+ ++   +L  ++L   D+                         
Sbjct: 95  RMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRANSTLKSLNANR 154

Query: 401 -------DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
                  +E     A+ LK NR++  + L   ++   G + ++  L DN  +T L+L+ N
Sbjct: 155 PILFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGITRLSEKLVDNMTLTYLNLSCN 214

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-MLRYNNTISILDLRANGLR 512
            I  DGAK LS++L+    +  + L + ++G  GA  +A+ ++ +N  +  L + +N +R
Sbjct: 215 RITRDGAKELSKLLRKDTALKVIDLSFNRLGDDGAIDIAEALMTFNTNLQTLVITSNEIR 274

Query: 513 DE-VCSGCNGLSF 524
            + +C+  N L  
Sbjct: 275 AKGLCALANALQM 287



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 10/216 (4%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D  AE I   L+ N  +T +DL  NNI   G+  IA++L++ + +  L+L  N IG +
Sbjct: 17  LDDAQAEIIYKWLRNNIFVTALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEE 76

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GAK +++ L  +  +  L++   +IG  G    A  L+ N T+  LDL    L  +    
Sbjct: 77  GAKDIAQALLKNETLKKLRMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIA 136

Query: 519 CNGLSFFHSAIYSL---KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
              +   +S + SL   + +LF       +  A  L      VN +L  + L   ++RD 
Sbjct: 137 LATVLRANSTLKSLNANRPILFSHQEETTVHFANMLK-----VNRSLKELHLMKYDMRDF 191

Query: 576 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
           G   +++ L  N  + +T LNL+ N +T+ G   L+
Sbjct: 192 GITRLSEKLVDN--MTLTYLNLSCNRITRDGAKELS 225



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 146 LFRESKQTLNEFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           LF   ++T   FA  L   R+   + +   +  D G+  L+E L  N T   ++ + N I
Sbjct: 157 LFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGITRLSEKLVDNMTLTYLNLSCNRI 216

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDE 261
           T  G K    +L+ + ALK ++LS N +GD+G   + + L+  N  ++ L ++S ++R +
Sbjct: 217 TRDGAKELSKLLRKDTALKVIDLSFNRLGDDGAIDIAEALMTFNTNLQTLVITSNEIRAK 276

Query: 262 GAKAIAELLKNNSIL 276
           G  A+A  L+ NS L
Sbjct: 277 GLCALANALQMNSTL 291


>gi|344174745|emb|CCA86555.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
           syzygii R24]
          Length = 468

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 184/397 (46%), Gaps = 84/397 (21%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L ++  L +L++S   IG EG + L D    N  +  L +S   +  EGAKA+A     +
Sbjct: 119 LANHPTLTSLDVSNGRIGPEGARALAD----NTKLTTLSVSHNRIGAEGAKALAA----S 170

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L+++ N I   G  +LA     N+ + +L++N N  G  GA ALA G    ++L 
Sbjct: 171 KTLTSLDISENGIGNEGACALAT----NAKLTTLNVNRNQIGVEGAKALAAG----EALT 222

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L + GN IGDEG+RAL +       +L  L++    + A G   +A      K+L  + 
Sbjct: 223 SLDIGGNDIGDEGVRALAA-----NARLTTLNVERTRVGADGVGALAA----SKTLTSLR 273

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N IGD GA     AL  N ++TT+ +  N I   GA A+A     N+ +T+L+L YN
Sbjct: 274 IDSNTIGDAGAR----ALATNTSLTTLHIESNGISPAGAQALA----ANTTLTTLNLGYN 325

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A      +  N   + L   + G S A   A  L  + T++ LD   N +RD
Sbjct: 326 GIGDAGAQA------WSANTTLISLSVRRSGLSDAG--ATTLAASKTLTTLDAGDNTIRD 377

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA+ LA      N  LT++D+  NEI 
Sbjct: 378 --------------------------------AGARALA-----ANRTLTTLDVRSNEIE 400

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           + G    A+AL AN  +A  SL+L NN +TK G  AL
Sbjct: 401 NAG----ARALAANTRLA--SLDLRNNRVTKAGVRAL 431



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 68/301 (22%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L    A +S+D+ G + GDEG+  LA                             
Sbjct: 210 EGAKALAAGEALTSLDIGGNDIGDEGVRALA----------------------------- 240

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
              +N  L TLN+    +G +GV  L      +  +  L++ S  + D GA+A+A     
Sbjct: 241 ---ANARLTTLNVERTRVGADGVGALA----ASKTLTSLRIDSNTIGDAGARALA----T 289

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L + +N I  +G    A+AL  N+T+ +L+L  N  G  GA A +     N +L
Sbjct: 290 NTSLTTLHIESNGISPAG----AQALAANTTLTTLNLGYNGIGDAGAQAWS----ANTTL 341

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L +  + + D G   L +  +     L  LD G+N+I   GA  +A      ++L  +
Sbjct: 342 ISLSVRRSGLSDAGATTLAASKT-----LTTLDAGDNTIRDAGARALAAN----RTLTTL 392

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  N+I + GA     AL  N  + ++DL  N +   G     R L  N  ++SL +++
Sbjct: 393 DVRSNEIENAGAR----ALAANTRLASLDLRNNRVTKAG----VRALLANRTLSSLGVSF 444

Query: 453 N 453
           N
Sbjct: 445 N 445



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 72/251 (28%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+A G  H++        L+ +N+    IG EGA ++A+    + T+T++D+    I  +
Sbjct: 88  ITAAGIAHLSRL-----PLVRLNVRDKRIGAEGARRLAN----HPTLTSLDVSNGRIGPE 138

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA    R L DN+ +T+L +++N IGA+GAKAL+                          
Sbjct: 139 GA----RALADNTKLTTLSVSHNRIGAEGAKALA-------------------------- 168

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY----LQ 546
                  + T++ LD+  NG+ +E   G   L+          +    +L +N     ++
Sbjct: 169 ------ASKTLTSLDISENGIGNE---GACALA---------TNAKLTTLNVNRNQIGVE 210

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           GAK LA       EALTS+D+  N+I D+G  A+A       +  +T+LN+    +   G
Sbjct: 211 GAKALA-----AGEALTSLDIGGNDIGDEGVRALAA------NARLTTLNVERTRVGADG 259

Query: 607 QSALTDAKDLV 617
             AL  +K L 
Sbjct: 260 VGALAASKTLT 270


>gi|421898414|ref|ZP_16328780.1| lrr-gala family type III effector protein (gala 2) [Ralstonia
            solanacearum MolK2]
 gi|206589620|emb|CAQ36581.1| lrr-gala family type III effector protein (gala 2) [Ralstonia
            solanacearum MolK2]
          Length = 1051

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 214/473 (45%), Gaps = 98/473 (20%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            LSG TG    E+   L   A+      S+D+SG   GD  +  LA S         ++ +
Sbjct: 654  LSGCTGSAVSEAG--LAVLAR--LPLESLDLSGTRIGDREVQALASSTSLT----SLNLS 705

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N I  AG +A    L  N  L  LN+S NPIGD GV+ L D    +  +  L+L  + +
Sbjct: 706  GNRIGNAGARA----LGRNTVLTALNVSANPIGDAGVQALAD----SQSLTSLELRGIGI 757

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
             + G  A+A    +N++LR L++++N +       LA     N T+ SL  N     A G
Sbjct: 758  GEAGIAALA----SNTVLRSLDISSNDLSEQSAAELAR----NQTLASLKAN-----ACG 804

Query: 319  -ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
              N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +G  
Sbjct: 805  LTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQGL- 858

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
                 ++  ++L  +++     GD GA      L +NR +T++ LG N I S GA  +A 
Sbjct: 859  ---RPLELSRTLTSLDVSGIGCGDRGALL----LSKNRALTSLKLGFNGIGSAGAQGLAA 911

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
                N  + SLDL  N I  D AKAL+      G + +L +  C++    A  +A+ L  
Sbjct: 912  ----NRTLISLDLRGNTIDVDAAKALANT----GCLTSLNVSDCKLDDEAASALAESL-- 961

Query: 498  NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV 557
              T++ LD+  N L     SG                           Q A+ LA     
Sbjct: 962  --TLTSLDVSVNRL-----SG---------------------------QAARALAG---- 983

Query: 558  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
             N  LTS++++ N I  DGA A+A      E  ++T L+   N + + G  AL
Sbjct: 984  -NATLTSLNISHNHIGPDGAQALA------ESPSLTFLDARANGIGEAGARAL 1029



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 76/267 (28%)

Query: 206 GIKAFDGVLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           G K+F+ +   + + L++LN++G  IGD+G                              
Sbjct: 140 GAKSFEAIAYLAGLPLESLNVAGADIGDDG------------------------------ 169

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
             A LL  N  LR L    N  +     + A AL E+  + SL L  N  G  GA ALA 
Sbjct: 170 --ARLLAANPSLRAL----NAANGGIGAAGARALAESPVLASLDLTRNGIGDEGARALA- 222

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN---------------- 368
              G++SL  L +    + D G RAL        G L  LD+GN                
Sbjct: 223 ---GSRSLTSLAVLNCLVTDVGARALAG-----NGTLTALDLGNLITETGNELEQAGYDR 274

Query: 369 --NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
             N I+A+GA+ +A+     +SL  +++  N  GD G +    AL +NRT+T++++   +
Sbjct: 275 TANEITARGAWALAQN----RSLTSLSIQGNLCGDGGVQ----ALARNRTLTSLNVAYTD 326

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYN 453
           +    A+ +AR    N V+TSL + +N
Sbjct: 327 MTPASATELAR----NPVLTSLSVRWN 349



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 49/244 (20%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G + GD+G   LA        A     A N        A    L  +  L +L
Sbjct: 155 LESLNVAGADIGDDGARLLA--------ANPSLRALNAANGGIGAAGARALAESPVLASL 206

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IGDEG + L      +  +  L + +  + D GA+A+A     N  L  L+L N
Sbjct: 207 DLTRNGIGDEGARALAG----SRSLTSLAVLNCLVTDVGARALA----GNGTLTALDLGN 258

Query: 284 ------NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
                 N ++ +G+   A  +                 A GA ALA+    N+SL  L +
Sbjct: 259 LITETGNELEQAGYDRTANEIT----------------ARGAWALAQ----NRSLTSLSI 298

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYM 396
            GN  GD G++AL     +R   L  L++    ++   A  +A   +    S+ W N  +
Sbjct: 299 QGNLCGDGGVQAL-----ARNRTLTSLNVAYTDMTPASATELARNPVLTSLSVRW-NYGL 352

Query: 397 NDIG 400
            D G
Sbjct: 353 GDAG 356


>gi|342180279|emb|CCC89756.1| ribonuclease inhibitor-like protein [Trypanosoma congolense IL3000]
          Length = 742

 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 175/377 (46%), Gaps = 47/377 (12%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G    + +  IL  N     L LS   L DEGA  IA+L++ N  L  + L +N I + 
Sbjct: 146 LGPMSAEAIAHILSSNTKYIVLDLSGNRLLDEGACLIAKLIRINKTLVHVGLRSNDIGHV 205

Query: 290 GFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           G  +LA ALL+N+TI SL L      NGN+    GA A+   L  NK L  L+L  N +G
Sbjct: 206 GGEALANALLQNNTIVSLDLGAHSGINGNHIATEGAKAIGNVLRANKVLSHLNLSCNGLG 265

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             GI  +  GL      L  LDI  N++   GA  +A+ ++NC ++  ++L  N++ D G
Sbjct: 266 HGGISFIAEGLDG-NCSLTHLDISVNNLGYMGAKVIADALENC-NITHLSLQRNNLTDSG 323

Query: 404 A----EKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
                E I  A++     I  +++  N++  K A AI R+L  +S +  L ++ N  G  
Sbjct: 324 GAVLFEAITAAVENGEDRIEYLNVESNDLGVKSAKAIQRMLGASSSMKQLRVSLNCFGP- 382

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
            +K + E L  +  + +L +  C I  +  +     L  N+T+  LDL  N LRD   + 
Sbjct: 383 SSKYIIEGLADNKGLQSLYMASCGIRETDGQPFTTGLAVNSTLQHLDLSHNRLRDAATT- 441

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                          C+A++ K  N+ L ++DL+ N I D+G  
Sbjct: 442 -------------------------------CIAEAMK-SNKGLINLDLSCNNIMDEGGA 469

Query: 579 AIAQALKANEDVAVTSL 595
           AIA  LK N  + V  L
Sbjct: 470 AIAMFLKCNTSLRVLKL 486



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 169/363 (46%), Gaps = 26/363 (7%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL- 225
           +D+SG    DEG   +A+ +  N+T   V   +N I   G +A    L  N  + +L+L 
Sbjct: 167 LDLSGNRLLDEGACLIAKLIRINKTLVHVGLRSNDIGHVGGEALANALLQNNTIVSLDLG 226

Query: 226 -----SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
                +GN I  EG K + ++L  N  +  L LS   L   G   IAE L  N  L  L+
Sbjct: 227 AHSGINGNHIATEGAKAIGNVLRANKVLSHLNLSCNGLGHGGISFIAEGLDGNCSLTHLD 286

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGN----YGGALGANALAKGLE-GNKSLREL 335
           ++ N + Y G   +A+A LEN  I  L L  N     GGA+   A+   +E G   +  L
Sbjct: 287 ISVNNLGYMGAKVIADA-LENCNITHLSLQRNNLTDSGGAVLFEAITAAVENGEDRIEYL 345

Query: 336 HLHGNSIGDEGIRAL--MSGLSSRKGKLAVLDIGNNSISAKG--AFHVAEYIKNCKSLLW 391
           ++  N +G +  +A+  M G SS   +L V      S++  G  + ++ E + + K L  
Sbjct: 346 NVESNDLGVKSAKAIQRMLGASSSMKQLRV------SLNCFGPSSKYIIEGLADNKGLQ- 398

Query: 392 INLYMNDIG--DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
            +LYM   G  +   +     L  N T+  +DL  N +     + IA  +K N  + +LD
Sbjct: 399 -SLYMASCGIRETDGQPFTTGLAVNSTLQHLDLSHNRLRDAATTCIAEAMKSNKGLINLD 457

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L+ N I  +G  A++  LK + ++  LKL    + +   + + + LR N TI  +D+  N
Sbjct: 458 LSCNNIMDEGGAAIAMFLKCNTSLRVLKLRRNCMSSVTGDLLDEQLRCNKTIEKMDVTYN 517

Query: 510 GLR 512
             R
Sbjct: 518 DFR 520



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 145/312 (46%), Gaps = 64/312 (20%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           K  VLD+  N +  +GA  +A+ I+  K+L+ + L  NDIG  G E +A+AL QN TI +
Sbjct: 163 KYIVLDLSGNRLLDEGACLIAKLIRINKTLVHVGLRSNDIGHVGGEALANALLQNNTIVS 222

Query: 420 IDLG------GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           +DLG      GN+I ++GA AI  VL+ N V++ L+L+ N +G  G   ++E L  + ++
Sbjct: 223 LDLGAHSGINGNHIATEGAKAIGNVLRANKVLSHLNLSCNGLGHGGISFIAEGLDGNCSL 282

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE------------VCSGCNG 521
             L +    +G  GA+ +AD L  N  I+ L L+ N L D             V +G + 
Sbjct: 283 THLDISVNNLGYMGAKVIADALE-NCNITHLSLQRNNLTDSGGAVLFEAITAAVENGEDR 341

Query: 522 LSFFH--------SAIYSLKHMLFYSLCINYLQ-GAKCLAQSFKVV-------------- 558
           + + +         +  +++ ML  S  +  L+    C   S K +              
Sbjct: 342 IEYLNVESNDLGVKSAKAIQRMLGASSSMKQLRVSLNCFGPSSKYIIEGLADNKGLQSLY 401

Query: 559 --------------------NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                               N  L  +DL+ N +RD     IA+A+K+N+   + +L+L+
Sbjct: 402 MASCGIRETDGQPFTTGLAVNSTLQHLDLSHNRLRDAATTCIAEAMKSNK--GLINLDLS 459

Query: 599 NNFLTKFGQSAL 610
            N +   G +A+
Sbjct: 460 CNNIMDEGGAAI 471



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 163/364 (44%), Gaps = 22/364 (6%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKAFDGVLQ 215
           +    V +   + G  G   LA +L  N T   +   A      N I   G KA   VL+
Sbjct: 190 KTLVHVGLRSNDIGHVGGEALANALLQNNTIVSLDLGAHSGINGNHIATEGAKAIGNVLR 249

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +N  L  LNLS N +G  G+  + + L  N  +  L +S  +L   GAK IA+ L+N +I
Sbjct: 250 ANKVLSHLNLSCNGLGHGGISFIAEGLDGNCSLTHLDISVNNLGYMGAKVIADALENCNI 309

Query: 276 LRVLELNNNMIDYSGFTSLAEAL---LENSTIRSLHLN--GNYGGALGANALAKGLEGNK 330
             +    NN+ D SG   L EA+   +EN   R  +LN   N  G   A A+ + L  + 
Sbjct: 310 THLSLQRNNLTD-SGGAVLFEAITAAVENGEDRIEYLNVESNDLGVKSAKAIQRMLGASS 368

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           S+++L +  N  G    + ++ GL+  KG L  L + +  I           +    +L 
Sbjct: 369 SMKQLRVSLNCFGPSS-KYIIEGLADNKG-LQSLYMASCGIRETDGQPFTTGLAVNSTLQ 426

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N + D     IA+A+K N+ +  +DL  NNI  +G +AIA  LK N+ +  L L
Sbjct: 427 HLDLSHNRLRDAATTCIAEAMKSNKGLINLDLSCNNIMDEGGAAIAMFLKCNTSLRVLKL 486

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGW------CQIGASGAEFVADMLRYNNTISIL 504
             N + +     L E L+ +  I  + + +      C IG      +A     N  +++ 
Sbjct: 487 RRNCMSSVTGDLLDEQLRCNKTIEKMDVTYNDFRYKCLIGIRAT--LAKNAEANKALAVP 544

Query: 505 DLRA 508
            LRA
Sbjct: 545 KLRA 548



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 14/186 (7%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           ++ E L  N+  + +  A+ GI     + F   L  N  L+ L+LS N + D    C+ +
Sbjct: 386 YIIEGLADNKGLQSLYMASCGIRETDGQPFTTGLAVNSTLQHLDLSHNRLRDAATTCIAE 445

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            +  N G+  L LS  ++ DEG  AIA  LK N+ LRVL+L  N +       L E L  
Sbjct: 446 AMKSNKGLINLDLSCNNIMDEGGAAIAMFLKCNTSLRVLKLRRNCMSSVTGDLLDEQLRC 505

Query: 301 NSTIRSLHLNGN---YGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           N TI  + +  N   Y   +G  A LAK  E NK+L              +RA + GLS 
Sbjct: 506 NKTIEKMDVTYNDFRYKCLIGIRATLAKNAEANKAL----------AVPKLRAEVEGLSF 555

Query: 357 RKGKLA 362
           ++ +LA
Sbjct: 556 KEKELA 561



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 104/250 (41%), Gaps = 49/250 (19%)

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           NCK   +  L  + +G   AE IA  L  N     +DL GN +  +GA  IA++++ N  
Sbjct: 133 NCKGTFFC-LRESGLGPMSAEAIAHILSSNTKYIVLDLSGNRLLDEGACLIAKLIRINKT 191

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  + L  N IG  G +AL                            A+ L  NNTI  L
Sbjct: 192 LVHVGLRSNDIGHVGGEAL----------------------------ANALLQNNTIVSL 223

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ---------GAKCLAQSF 555
           DL A+       SG NG         ++ ++L  +  +++L          G   +A+  
Sbjct: 224 DLGAH-------SGINGNHIATEGAKAIGNVLRANKVLSHLNLSCNGLGHGGISFIAEGL 276

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
              N +LT +D++ N +   GA  IA AL   E+  +T L+L  N LT  G + L +A  
Sbjct: 277 D-GNCSLTHLDISVNNLGYMGAKVIADAL---ENCNITHLSLQRNNLTDSGGAVLFEAIT 332

Query: 616 LVYEMSEKEV 625
              E  E  +
Sbjct: 333 AAVENGEDRI 342


>gi|301112693|ref|XP_002998117.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112411|gb|EEY70463.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 678

 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 11/319 (3%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA+ +  + T   +    N +   G +A    L S+ AL  LNLS   +GD+GV    D 
Sbjct: 333 LADGVRNHSTLHTIELENNPLGPIGGQALAECLASSSALTYLNLSWTQLGDDGVVGFRDA 392

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+ N  +ERL L   DLR  G  AIAE L+  + LR L L  N +  +G  +LA AL  +
Sbjct: 393 LIRNKSIERLDLRGNDLRVRGVVAIAEGLRCTATLRELHLRWNTVSPAGAEALAGALEVS 452

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALM 351
            ++  L +  +  G+ GA A A  LE NK L  L++ G            IG E  + + 
Sbjct: 453 KSLVLLDIEHHTMGSRGATAFASMLERNKRLEHLNIGGTDSDDALDAGLGIGSEQAQRIA 512

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L++    L +L IG N I+A       E +K  K+L+ ++L  + +    A +    L
Sbjct: 513 EVLTNSNRSLRILHIGANRINADAVARFGELLKFNKTLVALDLSYSGLDAAKAPRFFACL 572

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
             N T+  +DL  N I ++G  A  R L+ N  +  L+LAYN +  +    L+  L    
Sbjct: 573 SANNTLRRLDLAHNRIGNEGLVACTRALETNRTLRELNLAYNNMTEEPLAVLAAKLHAPK 632

Query: 472 NINTLKLGW-CQIGASGAE 489
            + TL L W C  G +  E
Sbjct: 633 RLITLTLEWLCLTGNNMTE 651



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 40/367 (10%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+ R   +V++ GR        FL + + ++     V+  +  I +A  +A    ++++ 
Sbjct: 282 KDHRDLVTVNLCGRQLELYEAGFLGKKMLHHLHLGRVTLNSCMIDSAAARALADGVRNHS 341

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L T+ L  NP+G  G + L + L  ++ +  L LS   L D+G                
Sbjct: 342 TLHTIELENNPLGPIGGQALAECLASSSALTYLNLSWTQLGDDGV--------------- 386

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
                      GF    +AL+ N +I  L L GN     G  A+A+GL    +LRELHL 
Sbjct: 387 ----------VGFR---DALIRNKSIERLDLRGNDLRVRGVVAIAEGLRCTATLRELHLR 433

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N++   G  AL   L   K  L +LDI ++++ ++GA   A  ++  K L  +N+   D
Sbjct: 434 WNTVSPAGAEALAGALEVSKS-LVLLDIEHHTMGSRGATAFASMLERNKRLEHLNIGGTD 492

Query: 399 ----------IGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
                     IG E A++IA+ L   NR++  + +G N I++   +    +LK N  + +
Sbjct: 493 SDDALDAGLGIGSEQAQRIAEVLTNSNRSLRILHIGANRINADAVARFGELLKFNKTLVA 552

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL+Y+ + A  A      L  +  +  L L   +IG  G       L  N T+  L+L 
Sbjct: 553 LDLSYSGLDAAKAPRFFACLSANNTLRRLDLAHNRIGNEGLVACTRALETNRTLRELNLA 612

Query: 508 ANGLRDE 514
            N + +E
Sbjct: 613 YNNMTEE 619



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 64/330 (19%)

Query: 325 GLEGNKSLRELHL-----HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           G  G K L  LHL     +   I     RAL  G+ +    L  +++ NN +   G   +
Sbjct: 303 GFLGKKMLHHLHLGRVTLNSCMIDSAAARALADGVRN-HSTLHTIELENNPLGPIGGQAL 361

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE + +  +L ++NL    +GD+G     DAL +N++I  +DL GN++  +G  AIA  L
Sbjct: 362 AECLASSSALTYLNLSWTQLGDDGVVGFRDALIRNKSIERLDLRGNDLRVRGVVAIAEGL 421

Query: 440 KDNSVITSLDLAYNPI----------------------------GADGAKALSEVLKFHG 471
           +  + +  L L +N +                            G+ GA A + +L+ + 
Sbjct: 422 RCTATLRELHLRWNTVSPAGAEALAGALEVSKSLVLLDIEHHTMGSRGATAFASMLERNK 481

Query: 472 NINTLKLGWCQ----------IGASGAEFVADML-RYNNTISILDLRANGLRDEVCSGCN 520
            +  L +G             IG+  A+ +A++L   N ++ IL + AN +  +  +   
Sbjct: 482 RLEHLNIGGTDSDDALDAGLGIGSEQAQRIAEVLTNSNRSLRILHIGANRINADAVARFG 541

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAK------CLAQSFKVVNEALTSIDLAFNEIRD 574
            L  F+  + +L   L YS     L  AK      CL+      N  L  +DLA N I +
Sbjct: 542 ELLKFNKTLVALD--LSYS----GLDAAKAPRFFACLS-----ANNTLRRLDLAHNRIGN 590

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           +G  A  +AL+ N    +  LNLA N +T+
Sbjct: 591 EGLVACTRALETNR--TLRELNLAYNNMTE 618



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 96/432 (22%), Positives = 182/432 (42%), Gaps = 57/432 (13%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L  +L  N+T     F+ N +    +      L+ N AL+ L + G  +  +G + L ++
Sbjct: 20  LGRALRENETLTRCDFSWNQMGPQAVLGLLSALRDNFALRELCVYGRDVAQDGTQYLLNL 79

Query: 242 LVDNA-----GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
             D+A      +  L  S    R  G +A+  + K  +   +  +N  +++  G   +A 
Sbjct: 80  DFDSAKRIVVALRHLNDSFALARLSGVRAVLPIAKVKTSRWITLVNRELVELDGLV-IAG 138

Query: 297 ALLENSTIRSLHLNGNYG-GALGANALAKGLEGNKSLRELHLH--------GNSIGDEGI 347
            + +N+ + SL ++ N G G +    L   ++G  +LRE++L         G SIG+  +
Sbjct: 139 VVPQNNMLLSLDMHDNPGLGRVAVLELLTAIKGCITLREINLSDTGLFPEAGESIGE--L 196

Query: 348 RALMSGLSSRKGKLAVLDI----GNN---SISAKGAFHVAEYIKNCKSLL--WI---NLY 395
            AL S L + K    V+++    GN     I  K  F V     + K  L  WI      
Sbjct: 197 VALNSTLLTIKMHETVINVQQVRGNRKYGEIPEKFEFSV-----DSKHFLDRWILAKCFA 251

Query: 396 MNDIGDEGAE-KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           +N    E  E ++ D  +  +T+  +D      H           KD+  + +++L    
Sbjct: 252 VNRFTQELNELRLPDVSRSVKTLVNMD----TTH-----------KDHRDLVTVNLCGRQ 296

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +    A  L + +  H ++  + L  C I ++ A  +AD +R ++T+  ++L  N L   
Sbjct: 297 LELYEAGFLGKKMLHHLHLGRVTLNSCMIDSAAARALADGVRNHSTLHTIELENNPL--- 353

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA-QSFKVVNEALTSIDLAFNEIR 573
              G  G       + S   + + +L    L     +  +   + N+++  +DL  N++R
Sbjct: 354 ---GPIGGQALAECLASSSALTYLNLSWTQLGDDGVVGFRDALIRNKSIERLDLRGNDLR 410

Query: 574 DDGAFAIAQALK 585
             G  AIA+ L+
Sbjct: 411 VRGVVAIAEGLR 422



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 3/150 (2%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +N +   G   L  AL EN T+     + N  G      L   L  N +LREL ++
Sbjct: 5   LNLRDNRLSAQGADELGRALRENETLTRCDFSWNQMGPQAVLGLLSALRDNFALRELCVY 64

Query: 339 GNSIGDEGIRALMS-GLSSRKGKLAVLDIGNNS--ISAKGAFHVAEYIKNCKSLLWINLY 395
           G  +  +G + L++    S K  +  L   N+S  ++          I   K+  WI L 
Sbjct: 65  GRDVAQDGTQYLLNLDFDSAKRIVVALRHLNDSFALARLSGVRAVLPIAKVKTSRWITLV 124

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGN 425
             ++ +     IA  + QN  + ++D+  N
Sbjct: 125 NRELVELDGLVIAGVVPQNNMLLSLDMHDN 154


>gi|167536250|ref|XP_001749797.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771724|gb|EDQ85386.1| predicted protein [Monosiga brevicollis MX1]
          Length = 445

 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 179/384 (46%), Gaps = 23/384 (5%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ------------- 190
           G  F    QTL +  +     + +D S R  GD+ L  +AES+  N+             
Sbjct: 2   GASFSTYDQTLRDIEENKGKHAELDYSNRALGDKRLQRMAESIHNNRRCFNLDSDPSCLD 61

Query: 191 --TAEEVSFAANGITAAGIKAFDGVLQSN---IALKTLNLSGNPIGDEGVKCLCDILVDN 245
             T   +  +   IT AG++    VL +    + ++ L L+ N +G +G + L   +  N
Sbjct: 62  RSTLCRLDLSNTNITGAGVRFLCDVLANGNGLLNVEALVLNNNALGPDGGRFLGRAIKMN 121

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             ++ ++L++  L DEGA AIA+ L+ N  +  +E+  N++      ++   L  N  + 
Sbjct: 122 GSLKHIKLNNCALGDEGALAIAQGLQENLSVLTIEMAGNLLSDRTAQAMGNMLAHNQHLE 181

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L  N   A GA  L  GL  N SLR L L  N+IG +G+      L      L  L 
Sbjct: 182 GLSLFQNSILAAGAKYLCDGLSMNASLRWLSLGSNNIGSDGMLHFKHALPHLN--LQWLA 239

Query: 366 IGNNSISAKGAFHVAEYI--KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +G NSI   G  H+AE +  ++C  L  + L  N+I D G + I  AL  N  +  + LG
Sbjct: 240 LGGNSIGDAGLQHLAEALADEHCP-LQSLGLGGNNISDIGMKDICKALWSNTGLEALGLG 298

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I  +G   +A++L  N  +  L L+ N I  +G   ++E L  + +++TL +     
Sbjct: 299 GNRIGVEGCEELAQMLTSNRSLRRLVLSSNQIDDEGLMVIAEGLCKNEHLHTLLIAANPF 358

Query: 484 GASGAEFVADMLRYNNTISILDLR 507
              GA ++A  L  + + +  DLR
Sbjct: 359 TMDGAWYLAQRLEKSKSFANHDLR 382



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 136/303 (44%), Gaps = 40/303 (13%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV--LDIGNNSISAKGAFHVAEYIKNCKS 388
           +L  L L   +I   G+R L   L++  G L V  L + NN++   G   +   IK   S
Sbjct: 64  TLCRLDLSNTNITGAGVRFLCDVLANGNGLLNVEALVLNNNALGPDGGRFLGRAIKMNGS 123

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  I L    +GDEGA  IA  L++N ++ TI++ GN +  + A A+  +L  N  +  L
Sbjct: 124 LKHIKLNNCALGDEGALAIAQGLQENLSVLTIEMAGNLLSDRTAQAMGNMLAHNQHLEGL 183

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR- 507
            L  N I A GAK L + L  + ++  L LG   IG+ G      ML + + +  L+L+ 
Sbjct: 184 SLFQNSILAAGAKYLCDGLSMNASLRWLSLGSNNIGSDG------MLHFKHALPHLNLQW 237

Query: 508 ----------------ANGLRDEVCS------GCN-----GLSFFHSAIYSLKHMLFYSL 540
                           A  L DE C       G N     G+     A++S   +    L
Sbjct: 238 LALGGNSIGDAGLQHLAEALADEHCPLQSLGLGGNNISDIGMKDICKALWSNTGLEALGL 297

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
             N +  +G + LAQ     N +L  + L+ N+I D+G   IA+ L  NE +  T L  A
Sbjct: 298 GGNRIGVEGCEELAQML-TSNRSLRRLVLSSNQIDDEGLMVIAEGLCKNEHLH-TLLIAA 355

Query: 599 NNF 601
           N F
Sbjct: 356 NPF 358



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 18/288 (6%)

Query: 61  PEGGRRQRRVYRQSQS--DNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPS 118
           P+GGR   R  + + S     L    +    +  +  G+  + + +  ++   LL     
Sbjct: 108 PDGGRFLGRAIKMNGSLKHIKLNNCALGDEGALAIAQGLQENLSVLTIEMAGNLL----- 162

Query: 119 RPSKPTAEGMNWSVGAGTNL--LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGD 176
             S  TA+ M   +    +L  LS F   +     + L +      +   + +   N G 
Sbjct: 163 --SDRTAQAMGNMLAHNQHLEGLSLFQNSILAAGAKYLCDGLSMNASLRWLSLGSNNIGS 220

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGV 235
           +G+     +L +    + ++   N I  AG++   + +   +  L++L L GN I D G+
Sbjct: 221 DGMLHFKHALPH-LNLQWLALGGNSIGDAGLQHLAEALADEHCPLQSLGLGGNNISDIGM 279

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K +C  L  N G+E L L    +  EG + +A++L +N  LR L L++N ID  G   +A
Sbjct: 280 KDICKALWSNTGLEALGLGGNRIGVEGCEELAQMLTSNRSLRRLVLSSNQIDDEGLMVIA 339

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-----LRELHLH 338
           E L +N  + +L +  N     GA  LA+ LE +KS     LR L +H
Sbjct: 340 EGLCKNEHLHTLLIAANPFTMDGAWYLAQRLEKSKSFANHDLRVLDIH 387


>gi|300691489|ref|YP_003752484.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299078549|emb|CBJ51205.2| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
           solanacearum PSI07]
          Length = 533

 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 206/457 (45%), Gaps = 109/457 (23%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           F D  L  L  SL    T  ++S     ITAAGI        S++ L  LN+    IG E
Sbjct: 129 FTDNDLRGLPASL----TELDLSRCRGPITAAGIAHL-----SHLPLVRLNVRDQRIGVE 179

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G +    +L ++  +  L +S+  +  EGA+A+A+    N+ L  L +++N I   G  +
Sbjct: 180 GAR----LLANHPTLTSLDVSNGRIGPEGARALAD----NTRLTTLSVSHNRIGAEGAKA 231

Query: 294 LAE--------------------ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           LA                     AL  N+ + +L++N N  G  GA ALA G    ++L 
Sbjct: 232 LAASETLTSLDISENGIGDEGACALATNTKLTTLNVNRNRIGVEGAKALAAG----EALT 287

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L + GN IGDEG+RAL +       +L  L++    + A G   +A      K+L  + 
Sbjct: 288 SLDIGGNDIGDEGVRALAA-----NARLTTLNVERTRVGADGVGALAA----SKTLTSLR 338

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N+IGD GA     AL  N ++TT+ +  N I   GA A+A     N+ +T+L+L YN
Sbjct: 339 IDSNNIGDAGAR----ALATNTSLTTLHIESNGISPAGAQALA----ANTTLTTLNLGYN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A      +  N   + L   + G S A   A +L  + T++ LD   N +RD
Sbjct: 391 GIGDAGAQA------WSANTTLISLSVRRNGLSDAG--ATILAASKTMTTLDAGDNTIRD 442

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA+ LA      N  LT++D+  NEI 
Sbjct: 443 --------------------------------AGARALA-----ANRTLTTLDVRSNEIE 465

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           + G    A+AL AN  +A  SL+L NN +T+ G  AL
Sbjct: 466 NAG----ARALAANTWLA--SLDLRNNRVTEAGVRAL 496



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 147/311 (47%), Gaps = 44/311 (14%)

Query: 156 EFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L A    +S+D+S    GDEG    A +L  N     ++   N I   G KA   
Sbjct: 227 EGAKALAASETLTSLDISENGIGDEG----ACALATNTKLTTLNVNRNRIGVEGAKA--- 279

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L +  AL +L++ GN IGDEGV+ L       A   RL   +V+    GA  +  L  +
Sbjct: 280 -LAAGEALTSLDIGGNDIGDEGVRAL-------AANARLTTLNVERTRVGADGVGALAAS 331

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            + L  L +++N I  +G    A AL  N+++ +LH+  N     GA ALA     N +L
Sbjct: 332 KT-LTSLRIDSNNIGDAG----ARALATNTSLTTLHIESNGISPAGAQALA----ANTTL 382

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L+L  N IGD G +A      S    L  L +  N +S  GA  +A      K++  +
Sbjct: 383 TTLNLGYNGIGDAGAQAW-----SANTTLISLSVRRNGLSDAGATILAA----SKTMTTL 433

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +   N I D GA     AL  NRT+TT+D+  N I + G    AR L  N+ + SLDL  
Sbjct: 434 DAGDNTIRDAGAR----ALAANRTLTTLDVRSNEIENAG----ARALAANTWLASLDLRN 485

Query: 453 NPIGADGAKAL 463
           N +   G +AL
Sbjct: 486 NRVTEAGVRAL 496



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 68/301 (22%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L    A +S+D+ G + GDEG+  LA                             
Sbjct: 275 EGAKALAAGEALTSLDIGGNDIGDEGVRALA----------------------------- 305

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
              +N  L TLN+    +G +GV  L      +  +  L++ S ++ D GA+A+A     
Sbjct: 306 ---ANARLTTLNVERTRVGADGVGALA----ASKTLTSLRIDSNNIGDAGARALA----T 354

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L + +N I  +G    A+AL  N+T+ +L+L  N  G  GA A +     N +L
Sbjct: 355 NTSLTTLHIESNGISPAG----AQALAANTTLTTLNLGYNGIGDAGAQAWS----ANTTL 406

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L +  N + D G   L +  +     +  LD G+N+I   GA  +A      ++L  +
Sbjct: 407 ISLSVRRNGLSDAGATILAASKT-----MTTLDAGDNTIRDAGARALAAN----RTLTTL 457

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  N+I + GA     AL  N  + ++DL  N +   G     R L  N  ++SL +++
Sbjct: 458 DVRSNEIENAGAR----ALAANTWLASLDLRNNRVTEAG----VRALLANRTLSSLGVSF 509

Query: 453 N 453
           N
Sbjct: 510 N 510


>gi|330789901|ref|XP_003283037.1| hypothetical protein DICPUDRAFT_96244 [Dictyostelium purpureum]
 gi|325087109|gb|EGC40490.1| hypothetical protein DICPUDRAFT_96244 [Dictyostelium purpureum]
          Length = 581

 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 161/330 (48%), Gaps = 29/330 (8%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           +N F++     +S+++     GD G   LA++L  N++ + +  +  G+ +   K    +
Sbjct: 148 INVFSRPSSCLTSINLFSNKIGDVGFERLAKALETNESIKFLGLSYCGLGSKSGKPLGQL 207

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            ++N  ++ + LS N +G  G   +   L     + +L LS  ++ DEGAK I   L  N
Sbjct: 208 FKNNSTIREIILSYNSLGKTGTIEMAKGLPYTKSLFKLSLSHNEIGDEGAKEIGSALSQN 267

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             ++ L+L  N I   G   + + L +N ++  + L GN  G  GA+ +   L+ NKS++
Sbjct: 268 KTIKELDLRCNSIGSMGSNYICQYLKDNISLVEIDLWGNLLGNDGASGIGMALQSNKSIK 327

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            ++L  NSI ++GI+ + + LS     L+V                      C S++ I+
Sbjct: 328 SINLTRNSIQEQGIKFITNALS-----LSV----------------------C-SIVTID 359

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G EGA++I+ A+ QNR+I  I+L  N   S  +  +   L  N  I +L+L+ N
Sbjct: 360 LSSNQLGLEGAKQISKAISQNRSIENINLSSNKFDSDASKILCTSLLSNKTIKTLNLSMN 419

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            IG +G     ++LK   N+  L L   +I
Sbjct: 420 DIGENGCIYFYQILK-ETNLKELNLSLNKI 448



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 152/302 (50%), Gaps = 14/302 (4%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S + S++L  N  G +G   LAK LE N+S++ L L    +G +  + L   L      +
Sbjct: 156 SCLTSINLFSNKIGDVGFERLAKALETNESIKFLGLSYCGLGSKSGKPL-GQLFKNNSTI 214

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             + +  NS+   G   +A+ +   KSL  ++L  N+IGDEGA++I  AL QN+TI  +D
Sbjct: 215 REIILSYNSLGKTGTIEMAKGLPYTKSLFKLSLSHNEIGDEGAKEIGSALSQNKTIKELD 274

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N+I S G++ I + LKDN  +  +DL  N +G DGA  +   L+ + +I ++ L   
Sbjct: 275 LRCNSIGSMGSNYICQYLKDNISLVEIDLWGNLLGNDGASGIGMALQSNKSIKSINLTRN 334

Query: 482 QIGASGAEFVADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
            I   G +F+ + L  +  +I  +DL +N L      G  G      AI   + +   +L
Sbjct: 335 SIQEQGIKFITNALSLSVCSIVTIDLSSNQL------GLEGAKQISKAISQNRSIENINL 388

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
             N      +K L  S  + N+ + +++L+ N+I ++G     Q LK   +  +  LNL+
Sbjct: 389 SSNKFDSDASKILCTSL-LSNKTIKTLNLSMNDIGENGCIYFYQILK---ETNLKELNLS 444

Query: 599 NN 600
            N
Sbjct: 445 LN 446



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 3/252 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +S + L +  K       + +S  + G  G   +A+ L Y ++  ++S + N I   G K
Sbjct: 199 KSGKPLGQLFKNNSTIREIILSYNSLGKTGTIEMAKGLPYTKSLFKLSLSHNEIGDEGAK 258

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L  N  +K L+L  N IG  G   +C  L DN  +  + L    L ++GA  I  
Sbjct: 259 EIGSALSQNKTIKELDLRCNSIGSMGSNYICQYLKDNISLVEIDLWGNLLGNDGASGIGM 318

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLE 327
            L++N  ++ + L  N I   G   +  AL L   +I ++ L+ N  G  GA  ++K + 
Sbjct: 319 ALQSNKSIKSINLTRNSIQEQGIKFITNALSLSVCSIVTIDLSSNQLGLEGAKQISKAIS 378

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N+S+  ++L  N    +  + L + L S K  +  L++  N I   G  +  + +K   
Sbjct: 379 QNRSIENINLSSNKFDSDASKILCTSLLSNKT-IKTLNLSMNDIGENGCIYFYQILKET- 436

Query: 388 SLLWINLYMNDI 399
           +L  +NL +N I
Sbjct: 437 NLKELNLSLNKI 448


>gi|320165463|gb|EFW42362.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 285

 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 35/213 (16%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           ++  INL  N I + GA  IA+ LK N  +T + L  N+I   GA AIA +LK N+ +TS
Sbjct: 39  TVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTLTS 98

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL  N I   GA+A++E LK + N+  L  GW  IG +GA+ ++  L+ N T++ LDL 
Sbjct: 99  LDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSLDLS 158

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            N + D                                  A+ +A++ K VN  L  ++L
Sbjct: 159 VNRIGDA--------------------------------EAQAIAEALK-VNTTLIWLNL 185

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           +FN+I D GA AIA+ALK N    + +L LA+N
Sbjct: 186 SFNQIGDTGALAIAEALKVN--TKLITLRLAHN 216



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 1/201 (0%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+T+  ++L  N    +GA A+A+ L+ N  L  L L  N IGD G +A+   L +    
Sbjct: 37  NTTVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNT-T 95

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  LD+  N I   GA  +AE +K   +L  +    N IGD GA+ I+ ALK N T+T++
Sbjct: 96  LTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSL 155

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           DL  N I    A AIA  LK N+ +  L+L++N IG  GA A++E LK +  + TL+L  
Sbjct: 156 DLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALKVNTKLITLRLAH 215

Query: 481 CQIGASGAEFVADMLRYNNTI 501
            +IG +    +   L+ N  I
Sbjct: 216 NEIGNAAVPSIVQALKMNKKI 236



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 109/204 (53%), Gaps = 1/204 (0%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  V  + L    +R+ GA+AIAE LK N+ L VL L  N I   G  ++AE L  N+T+
Sbjct: 37  NTTVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTL 96

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            SL L  N+    GA A+A+ L+ N +L  L    N IGD G +A+ + L      L  L
Sbjct: 97  TSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNT-TLTSL 155

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N I    A  +AE +K   +L+W+NL  N IGD GA  IA+ALK N  + T+ L  
Sbjct: 156 DLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALKVNTKLITLRLAH 215

Query: 425 NNIHSKGASAIARVLKDNSVITSL 448
           N I +    +I + LK N  I ++
Sbjct: 216 NEIGNAAVPSIVQALKMNKKIRNI 239



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 1/183 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++  ++L  N I + G RA+   L     +L VL +  N I   GA  +AE +K   +
Sbjct: 37  NTTVTMINLLFNQIREVGARAIAETLKVNT-RLTVLTLRMNDIGDVGAQAIAELLKTNTT 95

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  ++L  N I D GA+ IA+ALK N  +T +  G N+I   GA AI+  LK N+ +TSL
Sbjct: 96  LTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSL 155

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL+ N IG   A+A++E LK +  +  L L + QIG +GA  +A+ L+ N  +  L L  
Sbjct: 156 DLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALKVNTKLITLRLAH 215

Query: 509 NGL 511
           N +
Sbjct: 216 NEI 218



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 112/247 (45%), Gaps = 29/247 (11%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD     +AE+L  N T   ++   N I   G +A    L+ N  L  L L  N IGD 
Sbjct: 22  IGDAEALAVAEALKVNTTVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDV 81

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + ++L  N  +  L L    + D GA+AIAE LK N+ L +L    N I  +G  +
Sbjct: 82  GAQAIAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQA 141

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           ++ AL  N+T+ SL L+ N  G   A A+A+ L+ N +L  L+L  N IGD         
Sbjct: 142 ISAALKVNTTLTSLDLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGD--------- 192

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                GA  +AE +K    L+ + L  N+IG+     I  ALK 
Sbjct: 193 --------------------TGALAIAEALKVNTKLITLRLAHNEIGNAAVPSIVQALKM 232

Query: 414 NRTITTI 420
           N+ I  I
Sbjct: 233 NKKIRNI 239



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +S+D+   +  D G   +AE+L  N     ++F  N I  AG +A  
Sbjct: 84  QAIAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAIS 143

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L +L+LS N IGD   + + + L  N  +  L LS   + D GA AIAE LK
Sbjct: 144 AALKVNTTLTSLDLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALK 203

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            N+ L  L L +N I  +   S+ +AL  N  IR++
Sbjct: 204 VNTKLITLRLAHNEIGNAAVPSIVQALKMNKKIRNI 239



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 79/163 (48%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   +AE L  N T   +    N I  AG +A    L+ N  L  L    N IGD
Sbjct: 77  DIGDVGAQAIAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGD 136

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + +   L  N  +  L LS   + D  A+AIAE LK N+ L  L L+ N I  +G  
Sbjct: 137 AGAQAISAALKVNTTLTSLDLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGAL 196

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           ++AEAL  N+ + +L L  N  G     ++ + L+ NK +R +
Sbjct: 197 AIAEALKVNTKLITLRLAHNEIGNAAVPSIVQALKMNKKIRNI 239



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 33/125 (26%)

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
           K +  +  + L + QI   GA  +A+ L+ N  +++L LR N + D              
Sbjct: 35  KVNTTVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGD-------------- 80

Query: 528 AIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
                              GA+ +A+  K  N  LTS+DL  N I D GA AIA+ALK N
Sbjct: 81  ------------------VGAQAIAELLKT-NTTLTSLDLRENHICDAGAQAIAEALKVN 121

Query: 588 EDVAV 592
            ++ +
Sbjct: 122 TNLTL 126


>gi|320164844|gb|EFW41743.1| hypothetical protein CAOG_06875 [Capsaspora owczarzaki ATCC 30864]
          Length = 217

 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 98/180 (54%), Gaps = 1/180 (0%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L+   IGD+  +A+   L      +  L +  N I A GA  +A+ +K   +L W+N
Sbjct: 19  ELSLNHELIGDDEAKAIAEALKVNT-TVTTLKMDENQIGAVGAHAIADALKVNTTLTWLN 77

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IG+ GA+ IA  LK N T+T + LG N I   GA AIA  L+ N+ +TSLDL  +
Sbjct: 78  LQENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGES 137

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           PIG  G  A++E LK +  +    L   QI  +GA+ +A  L+ N T++ L L  N   D
Sbjct: 138 PIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDAGAQAIAATLKVNKTLTTLFLEENQFSD 197



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 6/213 (2%)

Query: 381 EYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +   N K   W ++L    IGD+ A+ IA+ALK N T+TT+ +  N I + GA AIA  L
Sbjct: 8   DLTHNVKFASWELSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADAL 67

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K N+ +T L+L  N IG  GA+A++  LK +  +  L LG  QIG  GA+ +A+ LR N 
Sbjct: 68  KVNTTLTWLNLQENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNT 127

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVN 559
           T++ LDL  + +     +G N ++       +LK    +   I+   GA+ +A + KV N
Sbjct: 128 TLTSLDLGESPIG---VAGVNAIAEALKVNTTLKKFGLWRSQIDD-AGAQAIAATLKV-N 182

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
           + LT++ L  N+  D GA AIA+ALK N  + V
Sbjct: 183 KTLTTLFLEENQFSDAGAQAIAEALKVNTALTV 215



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 29/226 (12%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L LN+ +I      ++AEAL  N+T+ +L ++ N  GA+GA+A+A  L+ N +L  L+L 
Sbjct: 20  LSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQ 79

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IG+ G +A                             +A  +K   +L  ++L  N 
Sbjct: 80  ENQIGNAGAQA-----------------------------IAATLKVNTTLTELSLGQNQ 110

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG  GA+ IA+ L+ N T+T++DLG + I   G +AIA  LK N+ +    L  + I   
Sbjct: 111 IGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDA 170

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           GA+A++  LK +  + TL L   Q   +GA+ +A+ L+ N  +++L
Sbjct: 171 GAQAIAATLKVNKTLTTLFLEENQFSDAGAQAIAEALKVNTALTVL 216



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 107/226 (47%), Gaps = 29/226 (12%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L+   IGD+  K + + L  N  V  L++    +   GA AIA+ LK N+ L  L L 
Sbjct: 20  LSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQ 79

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++A  L  N+T+  L L  N  G +GA A+A+GL  N +L  L L  + I
Sbjct: 80  ENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPI 139

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G  G+ A                             +AE +K   +L    L+ + I D 
Sbjct: 140 GVAGVNA-----------------------------IAEALKVNTTLKKFGLWRSQIDDA 170

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           GA+ IA  LK N+T+TT+ L  N     GA AIA  LK N+ +T L
Sbjct: 171 GAQAIAATLKVNKTLTTLFLEENQFSDAGAQAIAEALKVNTALTVL 216



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 2/193 (1%)

Query: 164 FSSVDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           F+S ++S  +   GD+    +AE+L  N T   +    N I A G  A    L+ N  L 
Sbjct: 15  FASWELSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLT 74

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N IG+ G + +   L  N  +  L L    +   GA+AIAE L+ N+ L  L+L
Sbjct: 75  WLNLQENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDL 134

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             + I  +G  ++AEAL  N+T++   L  +     GA A+A  L+ NK+L  L L  N 
Sbjct: 135 GESPIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDAGAQAIAATLKVNKTLTTLFLEENQ 194

Query: 342 IGDEGIRALMSGL 354
             D G +A+   L
Sbjct: 195 FSDAGAQAIAEAL 207



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 1/177 (0%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  + TL +  N IG  G   + D L  N  +  L L    + + GA+AIA
Sbjct: 33  KAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQENQIGNAGAQAIA 92

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             LK N+ L  L L  N I   G  ++AE L  N+T+ SL L  +  G  G NA+A+ L+
Sbjct: 93  ATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALK 152

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            N +L++  L  + I D G +A+ + L   K  L  L +  N  S  GA  +AE +K
Sbjct: 153 VNTTLKKFGLWRSQIDDAGAQAIAATLKVNK-TLTTLFLEENQFSDAGAQAIAEALK 208



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 81/172 (47%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++ M     G  G   +A++L  N T   ++   N I  AG +A    L+ N  L  L
Sbjct: 45  VTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQENQIGNAGAQAIAATLKVNTTLTEL 104

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IG  G + + + L  N  +  L L    +   G  AIAE LK N+ L+   L  
Sbjct: 105 SLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALKVNTTLKKFGLWR 164

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + ID +G  ++A  L  N T+ +L L  N     GA A+A+ L+ N +L  L
Sbjct: 165 SQIDDAGAQAIAATLKVNKTLTTLFLEENQFSDAGAQAIAEALKVNTALTVL 216


>gi|320169160|gb|EFW46059.1| hypothetical protein CAOG_04027 [Capsaspora owczarzaki ATCC 30864]
          Length = 437

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 15/218 (6%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A+ IA  LK ++ +  ++L+ N I  +G  ++AEAL  N+T+  L L  N  G  GA AL
Sbjct: 37  AQVIAAALKVHATIEDVQLDQNQIGDTGLQAIAEALTVNTTVTHLGLQLNQIGDAGAQAL 96

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L+ +K+L  L L+ N IGD G  A+   L      L  L +G N I   GA  +AE 
Sbjct: 97  AEALKVSKTLIWLDLNKNQIGDVGAGAIAEALKVNTTTLTELFLGWNQIGDAGAQAIAEA 156

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKD 441
           ++   +L +++L  N IGD GA+ IA+ALK N  T+T + +  N I   GA AIA  LK 
Sbjct: 157 LRVTTTLTFLDLRRNQIGDAGAQAIAEALKVNTTTLTELFMSANQIGDTGAQAIAEALKI 216

Query: 442 NSV--------------ITSLDLAYNPIGADGAKALSE 465
             V              +T +DL  N IG  G +A+ E
Sbjct: 217 GDVGAQAFAKVAQVRPMMTCIDLQGNYIGDAGTRAIEE 254



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 45/236 (19%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  N IGD G + IA+AL  N T+T + L  N I   GA A+A  LK +  +  LDL 
Sbjct: 53  VQLDQNQIGDTGLQAIAEALTVNTTVTHLGLQLNQIGDAGAQALAEALKVSKTLIWLDLN 112

Query: 452 YNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
            N IG  GA A++E LK +   +  L LGW QIG +GA+ +A+ LR   T++ LDLR N 
Sbjct: 113 KNQIGDVGAGAIAEALKVNTTTLTELFLGWNQIGDAGAQAIAEALRVTTTLTFLDLRRNQ 172

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFN 570
           + D                                 GA+ +A++ KV    LT + ++ N
Sbjct: 173 IGDA--------------------------------GAQAIAEALKVNTTTLTELFMSAN 200

Query: 571 EIRDDGAFAIAQALK------------ANEDVAVTSLNLANNFLTKFGQSALTDAK 614
           +I D GA AIA+ALK            A     +T ++L  N++   G  A+ +A+
Sbjct: 201 QIGDTGAQAIAEALKIGDVGAQAFAKVAQVRPMMTCIDLQGNYIGDAGTRAIEEAR 256



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 124/265 (46%), Gaps = 24/265 (9%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E +  ++ A+++  A   + AA +K        +  ++ + L  N IGD G++ + + L 
Sbjct: 21  EEITIDKVADKLDVAEAQVIAAALKV-------HATIEDVQLDQNQIGDTGLQAIAEALT 73

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-S 302
            N  V  L L    + D GA+A+AE LK +  L  L+LN N I   G  ++AEAL  N +
Sbjct: 74  VNTTVTHLGLQLNQIGDAGAQALAEALKVSKTLIWLDLNKNQIGDVGAGAIAEALKVNTT 133

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+  L L  N  G  GA A+A+ L    +L  L L  N IGD G +A+   L      L 
Sbjct: 134 TLTELFLGWNQIGDAGAQAIAEALRVTTTLTFLDLRRNQIGDAGAQAIAEALKVNTTTLT 193

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +  N I   GA  +AE +K              IGD GA+  A   +    +T IDL
Sbjct: 194 ELFMSANQIGDTGAQAIAEALK--------------IGDVGAQAFAKVAQVRPMMTCIDL 239

Query: 423 GGNNIHSKGASAI--ARVLKDNSVI 445
            GN I   G  AI  AR   ++S I
Sbjct: 240 QGNYIGDAGTRAIEEARFANESSAI 264



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 34/246 (13%)

Query: 139 LSGFTGKLFRESKQ---TLNEFAKELRA---------------FSSVDMSGRNFGDEGLF 180
           ++G   KL+R+ K    T+++ A +L                    V +     GD GL 
Sbjct: 7   MTGKQRKLYRQVKNEEITIDKVADKLDVAEAQVIAAALKVHATIEDVQLDQNQIGDTGLQ 66

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +AE+L  N T   +    N I  AG +A    L+ +  L  L+L+ N IGD G   + +
Sbjct: 67  AIAEALTVNTTVTHLGLQLNQIGDAGAQALAEALKVSKTLIWLDLNKNQIGDVGAGAIAE 126

Query: 241 IL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
            L V+   +  L L    + D GA+AIAE L+  + L  L+L  N I  +G  ++AEAL 
Sbjct: 127 ALKVNTTTLTELFLGWNQIGDAGAQAIAEALRVTTTLTFLDLRRNQIGDAGAQAIAEALK 186

Query: 300 EN-STIRSLHLNGNYGGALGANALAKGLE----GNKSLRE----------LHLHGNSIGD 344
            N +T+  L ++ N  G  GA A+A+ L+    G ++  +          + L GN IGD
Sbjct: 187 VNTTTLTELFMSANQIGDTGAQAIAEALKIGDVGAQAFAKVAQVRPMMTCIDLQGNYIGD 246

Query: 345 EGIRAL 350
            G RA+
Sbjct: 247 AGTRAI 252



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 13/199 (6%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           TID   + +    A  IA  LK ++ I  + L  N IG  G +A++E L  +  +  L L
Sbjct: 24  TIDKVADKLDVAEAQVIAAALKVHATIEDVQLDQNQIGDTGLQAIAEALTVNTTVTHLGL 83

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
              QIG +GA+ +A+ L+ + T+  LDL  N + D V +G    +        +      
Sbjct: 84  QLNQIGDAGAQALAEALKVSKTLIWLDLNKNQIGD-VGAGAIAEAL------KVNTTTLT 136

Query: 539 SLCINYLQ----GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
            L + + Q    GA+ +A++ +V    LT +DL  N+I D GA AIA+ALK N    +T 
Sbjct: 137 ELFLGWNQIGDAGAQAIAEALRVTT-TLTFLDLRRNQIGDAGAQAIAEALKVNT-TTLTE 194

Query: 595 LNLANNFLTKFGQSALTDA 613
           L ++ N +   G  A+ +A
Sbjct: 195 LFMSANQIGDTGAQAIAEA 213


>gi|15229383|ref|NP_191872.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|334186220|ref|NP_001190166.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|75334877|sp|Q9LE82.1|RAGP1_ARATH RecName: Full=RAN GTPase-activating protein 1; Short=AtRanGAP1;
           Short=RanGAP1
 gi|6708466|gb|AAF25947.1|AF214559_1 RAN GTPase activating protein 1 [Arabidopsis thaliana]
 gi|7573442|emb|CAB87758.1| RAN GTPase activating protein 1 protein [Arabidopsis thaliana]
 gi|14334454|gb|AAK59425.1| putative RAN GTPase activating protein 1 protein [Arabidopsis
           thaliana]
 gi|23297534|gb|AAN12889.1| putative RAN GTPase activating protein 1 protein [Arabidopsis
           thaliana]
 gi|332646917|gb|AEE80438.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|332646918|gb|AEE80439.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
          Length = 535

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 186/415 (44%), Gaps = 44/415 (10%)

Query: 94  PAGVFVSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTG--KLF---R 148
           P G   SA  V  K   KL++    R  +  +E     V    ++    +G  + F    
Sbjct: 77  PDGDGTSAVHVYAKESSKLMLDVIKRGPQEESE---VEVSKDGDVFFDISGGSRAFIEEE 133

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG--YNQTAE-EVS-FAANGITA 204
           E++  L   A    +++ +  S R+FG E   F A  L    +Q  E ++S F A    A
Sbjct: 134 EARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEA 193

Query: 205 AGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             ++    F   L+ +  L+ LNLS N +G++G++    ++     +E L L +  + ++
Sbjct: 194 EALEVMNMFSSALEGS-KLRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISED 252

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A+A+ ELL +   +RVL+ +NNM    G T++AE + E  ++     +    G+ G  A
Sbjct: 253 AARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVA 312

Query: 322 LAKGLEGNKSLRELHLHGNSIG----------------------------DEGIRALMSG 353
           LA+ LE    L++L L  N  G                            DEG  AL   
Sbjct: 313 LAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEA 372

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L VL++  N I+ K   ++A  I + +SL  +NL  N++ DEG   IA A++ 
Sbjct: 373 LLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEG 432

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +  +  +DL  N I   GA A+A+ +   +    L++  N I  +G   ++++ K
Sbjct: 433 HDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFISEEGIDEVNDMFK 487



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 149/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+K LR L+L  N++G++GIRA  S ++S+   L  L + N+ IS   A  V
Sbjct: 200 NMFSSALEGSK-LRYLNLSDNALGEKGIRAFASLINSQHD-LEELYLMNDGISEDAARAV 257

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + +   +  +  + N  GDEGA  IA+ +++  ++         I S+G  A+A  L
Sbjct: 258 RELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEAL 317

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-MLRYN 498
           +  S +  LDL  N  G +G  AL++ L    ++  + + +  +   G E +++ +L+  
Sbjct: 318 EHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSA 377

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++ +L+L  N +   V S  N      + I S + +   +L  N L  +G   +A++ +
Sbjct: 378 PSLEVLELAGNDIT--VKSTGN----LAACIASKQSLAKLNLSENELKDEGTILIAKAVE 431

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             ++ L  +DL+ N IR  GA A+AQ +       +  LN+  NF+++ G   + D
Sbjct: 432 G-HDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKL--LNINGNFISEEGIDEVND 484



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 142/334 (42%), Gaps = 49/334 (14%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKN 385
           S  ++     S G E  +   S LSS K +L  +D+     G     A    ++      
Sbjct: 148 SYTKIRFSNRSFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEAEALEVMNMFSSALE 207

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              L ++NL  N +G++G    A  +     +  + L  + I    A A+  +L     I
Sbjct: 208 GSKLRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKI 267

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             L    N  G +GA A++E+++   ++   +    +IG+ G   +A+ L + + +  LD
Sbjct: 268 RVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLD 327

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL----QGAKCLAQ-------S 554
           LR N        G  G       +  L H+    + ++YL    +G + L++       S
Sbjct: 328 LRDNMF------GVEGGIALAKTLSVLTHL--TEIYMSYLNLEDEGTEALSEALLKSAPS 379

Query: 555 FKVVN---------------------EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 593
            +V+                      ++L  ++L+ NE++D+G   IA+A++ ++   + 
Sbjct: 380 LEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQ--LV 437

Query: 594 SLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
            ++L+ N + + G  AL  A+ +V + + K +NI
Sbjct: 438 EVDLSTNMIRRAGARAL--AQTVVKKNTFKLLNI 469



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 29/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +    + E+   ++  I + G  A    L+    LK L+L  N  G EG
Sbjct: 278 GDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEG 337

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTS 293
              L   L     +  + +S ++L DEG +A++E LLK+   L VLEL  N I      +
Sbjct: 338 GIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGN 397

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           LA  +    ++  L+L+ N     G   +AK +EG+  L E                   
Sbjct: 398 LAACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQLVEVDLSTNMIRRAGARALAQT 457

Query: 335 ---------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
                    L+++GN I +EGI  +         KL  LD
Sbjct: 458 VVKKNTFKLLNINGNFISEEGIDEVNDMFKDCLDKLVPLD 497


>gi|344170515|emb|CCA82933.1| leucine-rich-repeat type III effector protein (GALA5) [blood
           disease bacterium R229]
          Length = 533

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 204/457 (44%), Gaps = 109/457 (23%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           F D  L  L  SL    T  ++S     ITAAGI        S++ L  LN+    IG E
Sbjct: 129 FTDNDLRGLPASL----TELDLSRCRGPITAAGIAHL-----SHLPLVRLNVRDQRIGVE 179

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G +    +L ++  +  L +S+  +  EGA+A+A     N+ L  L +++N I   G  +
Sbjct: 180 GAR----LLANHPTLTSLDVSNGRIGPEGARALA----GNTRLTTLSVSHNRIGAEGAKA 231

Query: 294 LAE--------------------ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           LA                     AL  N+ + +L++N N  G  GA ALA G    ++L 
Sbjct: 232 LAASETLTSLDISENGIGDEGACALATNTKLTALNVNRNRIGVEGAKALAAG----EALT 287

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L + GN IGDEG+RAL +       +L  L++    + A G   +A      K+L  + 
Sbjct: 288 SLDIGGNDIGDEGVRALAA-----NARLTTLNVERTRVGADGVGALAA----SKTLTSLR 338

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N+IGD GA     AL  N ++TT+ +  N I   GA A+A     N+ +T+L+L YN
Sbjct: 339 IDSNNIGDAGAR----ALATNTSLTTLHIESNGISPAGAQALA----ANTTLTTLNLGYN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A      +  N   + L   + G S A   A  L  + T++ LD   N +RD
Sbjct: 391 GIGDAGAQA------WSANTTLISLSVRRNGLSDAG--ATTLAASKTLTTLDAGDNTIRD 442

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA+ LA      N  LT++D+  NEI 
Sbjct: 443 --------------------------------AGARALA-----ANRTLTTLDVRSNEIE 465

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           + G    A+AL AN  +A  SL+L NN +T+ G  AL
Sbjct: 466 NAG----ARALAANTGLA--SLDLRNNRVTEAGVRAL 496



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 146/311 (46%), Gaps = 44/311 (14%)

Query: 156 EFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L A    +S+D+S    GDEG   LA     N     ++   N I   G KA   
Sbjct: 227 EGAKALAASETLTSLDISENGIGDEGACALA----TNTKLTALNVNRNRIGVEGAKA--- 279

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L +  AL +L++ GN IGDEGV+ L       A   RL   +V+    GA  +  L  +
Sbjct: 280 -LAAGEALTSLDIGGNDIGDEGVRAL-------AANARLTTLNVERTRVGADGVGALAAS 331

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            + L  L +++N I  +G    A AL  N+++ +LH+  N     GA ALA     N +L
Sbjct: 332 KT-LTSLRIDSNNIGDAG----ARALATNTSLTTLHIESNGISPAGAQALA----ANTTL 382

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L+L  N IGD G +A      S    L  L +  N +S  GA  +A      K+L  +
Sbjct: 383 TTLNLGYNGIGDAGAQAW-----SANTTLISLSVRRNGLSDAGATTLAA----SKTLTTL 433

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +   N I D GA     AL  NRT+TT+D+  N I + G    AR L  N+ + SLDL  
Sbjct: 434 DAGDNTIRDAGAR----ALAANRTLTTLDVRSNEIENAG----ARALAANTGLASLDLRN 485

Query: 453 NPIGADGAKAL 463
           N +   G +AL
Sbjct: 486 NRVTEAGVRAL 496



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 68/301 (22%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L    A +S+D+ G + GDEG+  LA                             
Sbjct: 275 EGAKALAAGEALTSLDIGGNDIGDEGVRALA----------------------------- 305

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
              +N  L TLN+    +G +GV  L      +  +  L++ S ++ D GA+A+A     
Sbjct: 306 ---ANARLTTLNVERTRVGADGVGALA----ASKTLTSLRIDSNNIGDAGARALA----T 354

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L + +N I  +G    A+AL  N+T+ +L+L  N  G  GA A +     N +L
Sbjct: 355 NTSLTTLHIESNGISPAG----AQALAANTTLTTLNLGYNGIGDAGAQAWS----ANTTL 406

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L +  N + D G   L +  +     L  LD G+N+I   GA  +A      ++L  +
Sbjct: 407 ISLSVRRNGLSDAGATTLAASKT-----LTTLDAGDNTIRDAGARALAAN----RTLTTL 457

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  N+I + GA     AL  N  + ++DL  N +   G     R L  N  ++SL +++
Sbjct: 458 DVRSNEIENAGAR----ALAANTGLASLDLRNNRVTEAG----VRALLANRTLSSLGVSF 509

Query: 453 N 453
           N
Sbjct: 510 N 510


>gi|320166643|gb|EFW43542.1| hypothetical protein CAOG_01586 [Capsaspora owczarzaki ATCC 30864]
          Length = 1804

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 9/245 (3%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +Q+  A++  N +   + DE  + +   L+ N  + +L L    + D+GA A+AE LK+ 
Sbjct: 20  MQAKDAIQDQNWTEMGLCDEEAEAIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHG 79

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S L  L LN+NMI  +G  +LA+ L  NS ++ L L+ N+    GA ALAK L  N SLR
Sbjct: 80  STLTSLNLNSNMITTTGLMALADCLSVNSQLKELFLDWNHIDCQGARALAKALATNTSLR 139

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N I  +G  A+   L S    L VL++  N + + G    A  +K  + L  +N
Sbjct: 140 RLDLEANLIRLDGGIAIAKSLESNSA-LEVLNLKGNRVGSTGTSAFATALKVNRKLCKLN 198

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN----SVITSLD 449
           L  ND+G  GA+ +  +LK N  +T + L  N I  +    + +VLK N      + +LD
Sbjct: 199 LSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDE----VVKVLKTNLMLYPTLKTLD 254

Query: 450 LAYNP 454
           L  NP
Sbjct: 255 LTGNP 259



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 106/211 (50%), Gaps = 2/211 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+     GD+G   LAE+L +  T   ++  +N IT  G+ A    L  N  LK L L 
Sbjct: 57  LDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTTGLMALADCLSVNSQLKELFLD 116

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  +G + L   L  N  + RL L +  +R +G  AIA+ L++NS L VL L  N +
Sbjct: 117 WNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRV 176

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             +G ++ A AL  N  +  L+L+ N  G+ GA AL   L+ N  L EL L  N I DE 
Sbjct: 177 GSTGTSAFATALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDEV 236

Query: 347 IRALMSGLSSRKGKLAVLDI-GNNSISAKGA 376
           ++ L + L      L  LD+ GN  IS   A
Sbjct: 237 VKVLKTNLMLYP-TLKTLDLTGNPKISTTTA 266



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 115/252 (45%), Gaps = 29/252 (11%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L DE A+AIA  L  N+ L  L+L  N I   G  +LAEAL   ST+ SL+LN N     
Sbjct: 36  LCDEEAEAIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTT 95

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G  ALA  L  N  L+EL L  N I  +G RAL   L++                     
Sbjct: 96  GLMALADCLSVNSQLKELFLDWNHIDCQGARALAKALATNT------------------- 136

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
                     SL  ++L  N I  +G   IA +L+ N  +  ++L GN + S G SA A 
Sbjct: 137 ----------SLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRVGSTGTSAFAT 186

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            LK N  +  L+L+ N +G+ GAKAL   LK +  +  L L   +I     + +   L  
Sbjct: 187 ALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDEVVKVLKTNLML 246

Query: 498 NNTISILDLRAN 509
             T+  LDL  N
Sbjct: 247 YPTLKTLDLTGN 258



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 1/197 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A GL  N +L +L L  N IGD+G  AL   L      L  L++ +N I+  G   
Sbjct: 41  AEAIALGLMANTNLLQLDLKKNQIGDKGAIALAEALK-HGSTLTSLNLNSNMITTTGLMA 99

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ +     L  + L  N I  +GA  +A AL  N ++  +DL  N I   G  AIA+ 
Sbjct: 100 LADCLSVNSQLKELFLDWNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGIAIAKS 159

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ NS +  L+L  N +G+ G  A +  LK +  +  L L    +G+ GA+ +   L+ N
Sbjct: 160 LESNSALEVLNLKGNRVGSTGTSAFATALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSN 219

Query: 499 NTISILDLRANGLRDEV 515
             ++ L L  N + DEV
Sbjct: 220 IGLTELSLSDNEIDDEV 236



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 11/202 (5%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DE AE IA  L  N  +  +DL  N I  KGA A+A  LK  S +TSL+L  N I   G 
Sbjct: 38  DEEAEAIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTTGL 97

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
            AL++ L  +  +  L L W  I   GA  +A  L  N ++  LDL AN +R       +
Sbjct: 98  MALADCLSVNSQLKELFLDWNHIDCQGARALAKALATNTSLRRLDLEANLIR------LD 151

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           G      ++ S   +   +L  N +   G    A + K VN  L  ++L+ N++   GA 
Sbjct: 152 GGIAIAKSLESNSALEVLNLKGNRVGSTGTSAFATALK-VNRKLCKLNLSSNDVGSRGAK 210

Query: 579 AIAQALKANEDVAVTSLNLANN 600
           A+  +LK+N  + +T L+L++N
Sbjct: 211 ALGLSLKSN--IGLTELSLSDN 230



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           + N  L  +DL  N+I D GA A+A+ALK      +TSLNL +N +T  G  AL D   +
Sbjct: 49  MANTNLLQLDLKKNQIGDKGAIALAEALKHGS--TLTSLNLNSNMITTTGLMALADCLSV 106

Query: 617 VYEMSE 622
             ++ E
Sbjct: 107 NSQLKE 112


>gi|334348993|ref|XP_001381520.2| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Monodelphis domestica]
          Length = 921

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 139/300 (46%), Gaps = 25/300 (8%)

Query: 188 YNQTAEEVS-FAANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEG 234
           Y   ++ VS  AA GI A  +K            A   VL        L+L  N + D G
Sbjct: 629 YEAQSQRVSRLAARGICANYLKLAYCNTCSADCSALAFVLHHVPKQLALDLDNNNLCDYG 688

Query: 235 VK----CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           VK    C   + V    V R+        D GA+ ++E L    I+  L L NN I   G
Sbjct: 689 VKELRPCFGRLTVIRLSVNRIA-------DAGARVLSEELTKYKIVTFLGLYNNQITDVG 741

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            T +A+ L E   +  L +  N   + G   LA  L+ ++S+ ++ + GN IGDEG +A 
Sbjct: 742 ATYVAKILEECPGLTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGAKAF 801

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L      LA L +  N IS +G   +A+ ++   S+    L  N++ DE AE +A+ 
Sbjct: 802 ADALRDHPS-LATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLTKNNLDDEAAESLAEM 860

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L+ N+T+  + L  N I +KG S +A  L+ NS I  + L+ NPI  + AK      +FH
Sbjct: 861 LEVNQTLNDLWLIQNQITAKGLSRLADALQKNSSILDICLSGNPIKPEEAKVFQHDKRFH 920



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 5/233 (2%)

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NNN+ DY G   L       + IR   L+ N     GA  L++ L   K +  L L+ N 
Sbjct: 681 NNNLCDY-GVKELRPCFGRLTVIR---LSVNRIADAGARVLSEELTKYKIVTFLGLYNNQ 736

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D G   +   L    G L  L IG N ++++G   +A  +K  +S+L I ++ N IGD
Sbjct: 737 ITDVGATYVAKILEECPG-LTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGD 795

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA+  ADAL+ + ++ T+ L  N I ++G  ++A+ L+ NS +    L  N +  + A+
Sbjct: 796 EGAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLTKNNLDDEAAE 855

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +L+E+L+ +  +N L L   QI A G   +AD L+ N++I  + L  N ++ E
Sbjct: 856 SLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKNSSILDICLSGNPIKPE 908



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 37/256 (14%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N++ D G++ L        G+L V+ +  N I+  GA  ++E +   K + ++ L
Sbjct: 677 LDLDNNNLCDYGVKELRPCF----GRLTVIRLSVNRIADAGARVLSEELTKYKIVTFLGL 732

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA  +A  L++   +T + +G N + S+G   +A  LK +  I  + +  N 
Sbjct: 733 YNNQITDVGATYVAKILEECPGLTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNK 792

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG +GAKA ++ L+ H ++ TL L +  I   G + +A  L+ N+++ I  L  N L DE
Sbjct: 793 IGDEGAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLTKNNLDDE 852

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                        A  SL  ML                     VN+ L  + L  N+I  
Sbjct: 853 -------------AAESLAEML--------------------EVNQTLNDLWLIQNQITA 879

Query: 575 DGAFAIAQALKANEDV 590
            G   +A AL+ N  +
Sbjct: 880 KGLSRLADALQKNSSI 895



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++A+ L        +   AN +T+ G K   
Sbjct: 715 RVLSEELTKYKIVTFLGLYNNQITDVGATYVAKILEECPGLTHLKIGANLLTSEGGKCLA 774

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ + ++  + + GN IGDEG K   D L D+  +  L L+   +  EG K++A+ L+
Sbjct: 775 AALKKSRSILDIGMWGNKIGDEGAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQ 834

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS +++  L  N +D     SLAE L  N T+  L L  N   A G + LA  L+ N S
Sbjct: 835 QNSSMKIFWLTKNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKNSS 894

Query: 332 LRELHLHGNSIGDE 345
           + ++ L GN I  E
Sbjct: 895 ILDICLSGNPIKPE 908



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 4/214 (1%)

Query: 159 KELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           KELR      + + +S     D G   L+E L   +    +    N IT  G      +L
Sbjct: 690 KELRPCFGRLTVIRLSVNRIADAGARVLSEELTKYKIVTFLGLYNNQITDVGATYVAKIL 749

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +    L  L +  N +  EG KCL   L  +  +  + +    + DEGAKA A+ L+++ 
Sbjct: 750 EECPGLTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGAKAFADALRDHP 809

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L  N I   G  SLA+AL +NS+++   L  N      A +LA+ LE N++L +
Sbjct: 810 SLATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLTKNNLDDEAAESLAEMLEVNQTLND 869

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L L  N I  +G+  L   L      L +   GN
Sbjct: 870 LWLIQNQITAKGLSRLADALQKNSSILDICLSGN 903



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 35/178 (19%)

Query: 135 GTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEE 194
           G NLL+   GK        L    K+ R+   + M G   GDE                 
Sbjct: 761 GANLLTSEGGK-------CLAAALKKSRSILDIGMWGNKIGDE----------------- 796

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
                      G KAF   L+ + +L TL+L+ N I  EG K L   L  N+ ++   L+
Sbjct: 797 -----------GAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLT 845

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             +L DE A+++AE+L+ N  L  L L  N I   G + LA+AL +NS+I  + L+GN
Sbjct: 846 KNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKNSSILDICLSGN 903



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 12/182 (6%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL  NN+   G   +       +VI    L+ N I   GA+ LSE L  +  +  L L 
Sbjct: 677 LDLDNNNLCDYGVKELRPCFGRLTVIR---LSVNRIADAGARVLSEELTKYKIVTFLGLY 733

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
             QI   GA +VA +L     ++ L + AN L  E      G     +A+   + +L   
Sbjct: 734 NNQITDVGATYVAKILEECPGLTHLKIGANLLTSE------GGKCLAAALKKSRSILDIG 787

Query: 540 LCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           +  N +  +GAK  A + +  + +L ++ LAFN I  +G  ++AQAL+ N  + +  L  
Sbjct: 788 MWGNKIGDEGAKAFADALRD-HPSLATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLTK 846

Query: 598 AN 599
            N
Sbjct: 847 NN 848



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 34/68 (50%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++  N  DE    LAE L  NQT  ++    N ITA G+      LQ N ++  + LSGN
Sbjct: 844 LTKNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKNSSILDICLSGN 903

Query: 229 PIGDEGVK 236
           PI  E  K
Sbjct: 904 PIKPEEAK 911


>gi|320167080|gb|EFW43979.1| hypothetical protein CAOG_02004 [Capsaspora owczarzaki ATCC 30864]
          Length = 285

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 125/239 (52%), Gaps = 35/239 (14%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           Y +  K+  W++L+ ++ G  GA  +A+ALK N  +T +DL  N I  +GA AIA  LK 
Sbjct: 11  YHQVTKASGWLSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKV 70

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +  LDL  N IG  GA+A +E LK + ++  L L   +IG +GA+ +A  +  N T+
Sbjct: 71  NTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTL 130

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           + L L  N + D                                 GA+ +A++ + VN  
Sbjct: 131 TKLHLYQNQIGDA--------------------------------GAQAIAEALR-VNTT 157

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 620
           +  +DL  N+I D GA AIA+ALK N+   +TS+ L +NFLT+ G +AL +  +   E+
Sbjct: 158 VNQLDLWANQIGDIGAQAIAEALKVNK--TLTSIRLEDNFLTEAGITALRETGNTSCEL 214



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 104/204 (50%), Gaps = 29/204 (14%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA A+AE LK N+ +  L+L  N I   G  ++AEAL  N+T+  L L  N  G  GA A
Sbjct: 32  GAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEA 91

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            A+ L+ NKS+ EL+L  N IGD G +A+   +           + N +++         
Sbjct: 92  FAEALKVNKSVVELYLWVNRIGDAGAQAIARAI-----------VVNTTLTK-------- 132

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
                     ++LY N IGD GA+ IA+AL+ N T+  +DL  N I   GA AIA  LK 
Sbjct: 133 ----------LHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDIGAQAIAEALKV 182

Query: 442 NSVITSLDLAYNPIGADGAKALSE 465
           N  +TS+ L  N +   G  AL E
Sbjct: 183 NKTLTSIRLEDNFLTEAGITALRE 206



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 33/217 (15%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  +     GA  VAE +K   ++  ++LY N IGD+GA+ IA+ALK N T+  +DL 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLR 80

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA A A  LK N  +  L L  N IG  GA+A++  +  +  +  L L   QI
Sbjct: 81  ENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQI 140

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G +GA+ +A+ LR N T++ LDL AN + D                              
Sbjct: 141 GDAGAQAIAEALRVNTTVNQLDLWANQIGD------------------------------ 170

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
              GA+ +A++ K VN+ LTSI L  N + + G  A+
Sbjct: 171 --IGAQAIAEALK-VNKTLTSIRLEDNFLTEAGITAL 204



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 29/207 (14%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L  +  G  GA A+A+ L+ N ++  L L+ N IGD+G +A                 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQA----------------- 63

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                       +AE +K   ++  ++L  N IGD GAE  A+ALK N+++  + L  N 
Sbjct: 64  ------------IAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNR 111

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I   GA AIAR +  N+ +T L L  N IG  GA+A++E L+ +  +N L L   QIG  
Sbjct: 112 IGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDI 171

Query: 487 GAEFVADMLRYNNTISILDLRANGLRD 513
           GA+ +A+ L+ N T++ + L  N L +
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTE 198



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 29/213 (13%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  +  G  G   + + L  N  V  L L    + D+GA+AIAE LK N+ + VL+L 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLR 80

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  + AEAL  N ++  L+L  N  G  GA A+A+ +  N +L +LHL+ N I
Sbjct: 81  ENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQI 140

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A                             +AE ++   ++  ++L+ N IGD 
Sbjct: 141 GDAGAQA-----------------------------IAEALRVNTTVNQLDLWANQIGDI 171

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           GA+ IA+ALK N+T+T+I L  N +   G +A+
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 87/176 (49%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           G  G   +AE+L  N     +    N I   G +A    L+ N  +  L+L  N IGD G
Sbjct: 29  GCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAG 88

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +   + L  N  V  L L    + D GA+AIA  +  N+ L  L L  N I  +G  ++
Sbjct: 89  AEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAI 148

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           AEAL  N+T+  L L  N  G +GA A+A+ L+ NK+L  + L  N + + GI AL
Sbjct: 149 AEALRVNTTVNQLDLWANQIGDIGAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 81/154 (52%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N A+  L+L  N IGD+G + + + L  N  V  L L    + D GA+
Sbjct: 31  AGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAE 90

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A AE LK N  +  L L  N I  +G  ++A A++ N+T+  LHL  N  G  GA A+A+
Sbjct: 91  AFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAE 150

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            L  N ++ +L L  N IGD G +A+   L   K
Sbjct: 151 ALRVNTTVNQLDLWANQIGDIGAQAIAEALKVNK 184



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 90/183 (49%), Gaps = 10/183 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + +D+     GD+G   +AE+L  N T   +    N I  AG +AF   L+ N ++  
Sbjct: 45  AVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVE 104

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L  N IGD G + +   +V N  + +L L    + D GA+AIAE L+ N+ +  L+L 
Sbjct: 105 LYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLW 164

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK----------GLEGNKSL 332
            N I   G  ++AEAL  N T+ S+ L  N+    G  AL +           LEG   L
Sbjct: 165 ANQIGDIGAQAIAEALKVNKTLTSIRLEDNFLTEAGITALRETGNTSCELNFSLEGCMVL 224

Query: 333 REL 335
           +EL
Sbjct: 225 QEL 227



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 75/155 (48%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           +  ++  +  Q + E  K     + +D+     GD G    AE+L  N++  E+    N 
Sbjct: 52  YQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNR 111

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I  AG +A    +  N  L  L+L  N IGD G + + + L  N  V +L L +  + D 
Sbjct: 112 IGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDI 171

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           GA+AIAE LK N  L  + L +N +  +G T+L E
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITALRE 206


>gi|443699303|gb|ELT98859.1| hypothetical protein CAPTEDRAFT_222234 [Capitella teleta]
          Length = 773

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 136/271 (50%), Gaps = 12/271 (4%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           EVS   +G+ ++G +A   VL+ NI L+ ++LSGN I  EG   L   L +N  +  LQL
Sbjct: 304 EVSMKYHGLGSSGARAIAAVLKRNITLERVDLSGNWIEPEGGVVLAKTLQENDYITTLQL 363

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +   L   GA    ++L  N+ LR L+L+     + G  S+   L        LH  GN 
Sbjct: 364 ADNKLGRSGAYHFCKMLLVNTTLRTLDLSGR---FKGQHSVHIDL-------PLH-TGNG 412

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G + A  LA+ +E NK L+EL L  N  G+     L   + +    L V+D+  N I  
Sbjct: 413 FGDIEAAYLAEAIEENKYLKELILSNNQFGETAGAVLGPSIGAND-VLDVIDLSWNQIRG 471

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  VA+ +K    L   +L  N  G EG + IADAL  N ++  +++ GN +   GA 
Sbjct: 472 YGAVAVAKGLKENVRLKSCDLSWNGFGVEGGKAIADALATNDSLLDLNVTGNRLDIDGAH 531

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            IA+ L +N  + +L +  NPI   GA AL+
Sbjct: 532 VIAKALANNETLRTLKIGSNPISTAGAVALA 562



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 12/248 (4%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+AIA +LK N  L  ++L+ N I+  G   LA+ L EN  I +L L  N  G  GA  
Sbjct: 316 GARAIAAVLKRNITLERVDLSGNWIEPEGGVVLAKTLQENDYITTLQLADNKLGRSGAYH 375

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
             K L  N +LR L L G   G   +   +            L  GN     + A+ +AE
Sbjct: 376 FCKMLLVNTTLRTLDLSGRFKGQHSVHIDLP-----------LHTGNGFGDIEAAY-LAE 423

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I+  K L  + L  N  G+     +  ++  N  +  IDL  N I   GA A+A+ LK+
Sbjct: 424 AIEENKYLKELILSNNQFGETAGAVLGPSIGANDVLDVIDLSWNQIRGYGAVAVAKGLKE 483

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  + S DL++N  G +G KA+++ L  + ++  L +   ++   GA  +A  L  N T+
Sbjct: 484 NVRLKSCDLSWNGFGVEGGKAIADALATNDSLLDLNVTGNRLDIDGAHVIAKALANNETL 543

Query: 502 SILDLRAN 509
             L + +N
Sbjct: 544 RTLKIGSN 551



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 31/287 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+SG     EG   LA++L  N     +  A N +  +G   F  +L  N  L+TL+LS
Sbjct: 333 VDLSGNWIEPEGGVVLAKTLQENDYITTLQLADNKLGRSGAYHFCKMLLVNTTLRTLDLS 392

Query: 227 G-----------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           G                 N  GD     L + + +N  ++ L LS+    +     +   
Sbjct: 393 GRFKGQHSVHIDLPLHTGNGFGDIEAAYLAEAIEENKYLKELILSNNQFGETAGAVLGPS 452

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           +  N +L V++L+ N I   G  ++A+ L EN  ++S  L+ N  G  G  A+A  L  N
Sbjct: 453 IGANDVLDVIDLSWNQIRGYGAVAVAKGLKENVRLKSCDLSWNGFGVEGGKAIADALATN 512

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            SL +L++ GN +  +G   +   L++ +  L  L IG+N IS  GA  +A  + N ++ 
Sbjct: 513 DSLLDLNVTGNRLDIDGAHVIAKALANNE-TLRTLKIGSNPISTAGAVALASAVNNNENC 571

Query: 390 LWINLYMNDIGDEGAE-KIADALKQNRTI------------TTIDLG 423
           +   L + D+  E    K+ D ++  +T             TT DLG
Sbjct: 572 VLTRLDLKDVPVEFEYLKLVDEIQAKKTFHSNEGTILRSGNTTKDLG 618



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 123/274 (44%), Gaps = 45/274 (16%)

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--------------LWINLYMNDIGDEGA 404
           G +A+ D G++ +   G    A Y K C  L                +++  + +G  GA
Sbjct: 261 GFIAIRDDGSDDLDLNGR---ATYQKVCDELGIVPASYFIRHLDCAEVSMKYHGLGSSGA 317

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             IA  LK+N T+  +DL GN I  +G   +A+ L++N  IT+L LA N +G  GA    
Sbjct: 318 RAIAAVLKRNITLERVDLSGNWIEPEGGVVLAKTLQENDYITTLQLADNKLGRSGAYHFC 377

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI-LDL---RANGLRDEVCSGCN 520
           ++L  +  + TL L       SG        R+    S+ +DL     NG  D       
Sbjct: 378 KMLLVNTTLRTLDL-------SG--------RFKGQHSVHIDLPLHTGNGFGDIEA---- 418

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             ++   AI   K++    L  N   + A  +       N+ L  IDL++N+IR  GA A
Sbjct: 419 --AYLAEAIEENKYLKELILSNNQFGETAGAVLGPSIGANDVLDVIDLSWNQIRGYGAVA 476

Query: 580 IAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +A+ LK  E+V + S +L+ N     G  A+ DA
Sbjct: 477 VAKGLK--ENVRLKSCDLSWNGFGVEGGKAIADA 508



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 72/148 (48%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  +E +    + +S   FG+     L  S+G N   + +  + N I   G  A    
Sbjct: 421 LAEAIEENKYLKELILSNNQFGETAGAVLGPSIGANDVLDVIDLSWNQIRGYGAVAVAKG 480

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N+ LK+ +LS N  G EG K + D L  N  +  L ++   L  +GA  IA+ L NN
Sbjct: 481 LKENVRLKSCDLSWNGFGVEGGKAIADALATNDSLLDLNVTGNRLDIDGAHVIAKALANN 540

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLEN 301
             LR L++ +N I  +G  +LA A+  N
Sbjct: 541 ETLRTLKIGSNPISTAGAVALASAVNNN 568



 Score = 40.4 bits (93), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KE     S D+S   FG EG   +A++L  N +  +++   N +   G       L +N 
Sbjct: 482 KENVRLKSCDLSWNGFGVEGGKAIADALATNDSLLDLNVTGNRLDIDGAHVIAKALANNE 541

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
            L+TL +  NPI   G   L   + +N   E   L+ +DL+D
Sbjct: 542 TLRTLKIGSNPISTAGAVALASAVNNN---ENCVLTRLDLKD 580


>gi|403264743|ref|XP_003924632.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 471

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N T  ++    NGIT  GI +   +LQ N  L+ LN
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D L  N + +  L+LS  D ++E A  + ++L +N  ++ L+L++
Sbjct: 151 ISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N+    GA AL  GL GN +L +L L  N +G
Sbjct: 211 NQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+  N IS +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEGALALGEVLRLNSC-LVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDG 329

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 330 ALLLILSIKRN 340



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L ++NN +   G   +++ L  N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L++  G L  LD+  N    +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLATNVG-LTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+EGA  + + L+ N  +  +D+ GN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 SVDGA 330



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 118/228 (51%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 104 GTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELNISNNQLGLEGARI 163

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  LE N  S+  L L GN   +E    L   LSS   ++  LD+ +N  S  G  H+ 
Sbjct: 164 ISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNY-RIKKLDLSHNQFSDVGGEHLG 222

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N T+T +DL  N + ++GA A+  VL+
Sbjct: 223 QMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGALALGEVLR 282

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD++ N I  +GA  +S+ L+ + ++  LKL    I   GA
Sbjct: 283 LNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDGA 330



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 117/231 (50%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           LN++ +   G  ++A AL+ N+T+  L L  N     G  +L + L+ N  L+EL++  N
Sbjct: 95  LNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELNISNN 154

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +G EG R +   L +    +  L++  N    + A  + + + +   +  ++L  N   
Sbjct: 155 QLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFS 214

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D G E +   L  N  +T++DL  N+ H++GA A+   L+ N  +T LDL+ N +G +GA
Sbjct: 215 DVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGA 274

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            AL EVL+ +  +  L +    I   GA  ++  L  N ++ +L L  N +
Sbjct: 275 LALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPI 325



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 139/280 (49%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    ++ L++ +N I+ +G   + E ++    L  +N+
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNT-TVSKLELEDNGITEEGILSLVEMLQENYYLQELNI 151

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D L+ N + I +++L GN+   + A+ + +VL  N  I  LDL++N
Sbjct: 152 SNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHN 211

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NGL +
Sbjct: 212 QFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 271

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           E                +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 272 E-------------GALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLES-NESLKV 317

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  ++K N    +  L+++N  +++
Sbjct: 318 LKLFLNPISVDGALLLILSIKRNPKSRMEELDISNVLVSE 357



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
           +L E  +E      +++S    G EG   +++ L  N ++   +  + N           
Sbjct: 135 SLVEMLQENYYLQELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLC 194

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            VL SN  +K L+LS N   D G + L  +L  N G+  L LS       GA A+   L+
Sbjct: 195 QVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLR 254

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+ N +   G  +L E L  NS +  L ++GN     GA+ ++KGLE N+S
Sbjct: 255 GNVTLTKLDLSMNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNES 314

Query: 332 LRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           L+ L L  N I  +G +  ++S   + K ++  LDI N  +S +
Sbjct: 315 LKVLKLFLNPISVDGALLLILSIKRNPKSRMEELDISNVLVSEQ 358



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 2/162 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S   F D G   L + L  N     +  + N     G  A    L+ N+ L  L+LS
Sbjct: 206 LDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G+EG   L ++L  N+ +  L +S  D+ +EGA  I++ L++N  L+VL+L  N I
Sbjct: 266 MNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPI 325

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
              G   L  ++  N   R   L  +    L +    K L+G
Sbjct: 326 SVDGALLLILSIKRNPKSRMEEL--DISNVLVSEQFMKTLDG 365


>gi|154341352|ref|XP_001566629.1| ribonuclease inhibitor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063952|emb|CAM40143.1| ribonuclease inhibitor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 735

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 183/374 (48%), Gaps = 41/374 (10%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL- 309
           L LS   LRD+GA+ IA+L+K N  L  +++ +N I + G   LA ALLEN T+ SL + 
Sbjct: 175 LDLSGNRLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLLARALLENDTVISLDIG 234

Query: 310 -----NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                NGN+ G  GA A  + L  NK L  L++  N +G  G+  + S L   +  L  L
Sbjct: 235 ARAGTNGNHIGTPGAEAFGEVLRRNKVLARLNVSSNGLGAVGVAFIASALEHSRS-LTCL 293

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-----KQNRTITT 419
           ++ +N++   GA  +A  ++      W  L  N +GD+G   + DAL       +  +  
Sbjct: 294 NLSSNNLGFDGARVLASRLEVAHVTRW-ELPRNYLGDKGGACLLDALAGAIRNGHDVVEY 352

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL  N +  + A A+ +VL  ++ + +L L  N +GA G KA+S  L  + ++ +L L 
Sbjct: 353 LDLDDNTLGERSAEAVGKVLSASATLVTLRLNGNLLGA-GVKAISTGLNENHSLKSLFLR 411

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRD----EVCSG---------CN------ 520
            C I   GA  +   L  N T+  LD+  N ++D    E+  G         CN      
Sbjct: 412 KCSIDQIGAAALGATLYVNYTLGQLDVSNNRVKDGGAVELAKGLAVNKCLTMCNVSSNRI 471

Query: 521 ----GLSFFHSAIYSLKHMLFYSLCINYLQGA--KCLAQSFKVVNEALTSIDLAFNEIRD 574
               GL     AI   + +   +L  N +  A  + ++ SF+ +N+ L  +D+++N+   
Sbjct: 472 GHVGGLEMA-KAIQKNRTLRHLNLRHNLMLEATGEAISDSFR-INKTLERLDVSYNDFSY 529

Query: 575 DGAFAIAQALKANE 588
             A +I +AL+ N+
Sbjct: 530 ACAMSIERALERNK 543



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 151/304 (49%), Gaps = 8/304 (2%)

Query: 170 SGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           +G + G  G     E L  N+    ++ ++NG+ A G+      L+ + +L  LNLS N 
Sbjct: 240 NGNHIGTPGAEAFGEVLRRNKVLARLNVSSNGLGAVGVAFIASALEHSRSLTCLNLSSNN 299

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA----KAIAELLKN-NSILRVLELNNN 284
           +G +G + L   L + A V R +L    L D+G      A+A  ++N + ++  L+L++N
Sbjct: 300 LGFDGARVLASRL-EVAHVTRWELPRNYLGDKGGACLLDALAGAIRNGHDVVEYLDLDDN 358

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +      ++ + L  ++T+ +L LNGN  GA G  A++ GL  N SL+ L L   SI  
Sbjct: 359 TLGERSAEAVGKVLSASATLVTLRLNGNLLGA-GVKAISTGLNENHSLKSLFLRKCSIDQ 417

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  AL + L      L  LD+ NN +   GA  +A+ +   K L   N+  N IG  G 
Sbjct: 418 IGAAALGATLYV-NYTLGQLDVSNNRVKDGGAVELAKGLAVNKCLTMCNVSSNRIGHVGG 476

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            ++A A+++NRT+  ++L  N +      AI+   + N  +  LD++YN      A ++ 
Sbjct: 477 LEMAKAIQKNRTLRHLNLRHNLMLEATGEAISDSFRINKTLERLDVSYNDFSYACAMSIE 536

Query: 465 EVLK 468
             L+
Sbjct: 537 RALE 540



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 215/486 (44%), Gaps = 42/486 (8%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R +S +D+SG    D+G  F+A+ +  N+T   +  A+N I   G       L  N  + 
Sbjct: 170 RHYSVLDLSGNRLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLLARALLENDTVI 229

Query: 222 TLNL------SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +L++      +GN IG  G +   ++L  N  + RL +SS  L   G   IA  L+++  
Sbjct: 230 SLDIGARAGTNGNHIGTPGAEAFGEVLRRNKVLARLNVSSNGLGAVGVAFIASALEHSRS 289

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY----GGALGANALAKGLE-GNK 330
           L  L L++N + + G   LA + LE + +    L  NY    GGA   +ALA  +  G+ 
Sbjct: 290 LTCLNLSSNNLGFDGARVLA-SRLEVAHVTRWELPRNYLGDKGGACLLDALAGAIRNGHD 348

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            +  L L  N++G+    A+   LS+    L  L +  N + A G   ++  +    SL 
Sbjct: 349 VVEYLDLDDNTLGERSAEAVGKVLSA-SATLVTLRLNGNLLGA-GVKAISTGLNENHSLK 406

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L    I   GA  +   L  N T+  +D+  N +   GA  +A+ L  N  +T  ++
Sbjct: 407 SLFLRKCSIDQIGAAALGATLYVNYTLGQLDVSNNRVKDGGAVELAKGLAVNKCLTMCNV 466

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           + N IG  G   +++ ++ +  +  L L    +  +  E ++D  R N T+  LD+  N 
Sbjct: 467 SSNRIGHVGGLEMAKAIQKNRTLRHLNLRHNLMLEATGEAISDSFRINKTLERLDVSYN- 525

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFY------SLCINYLQG-AKCLAQSFKVVNEALT 563
                        F ++   S++  L        +L +  LQ     LA   K +N A+ 
Sbjct: 526 ------------DFSYACAMSIERALERNKASNKTLLVPRLQANIDALAPKEKELNRAVE 573

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF--LTKFGQ--SALTDAKDLVYE 619
            I+L    +RD G     + ++  E+  V +  L      L +  +  SAL+DA + ++ 
Sbjct: 574 DIELEKRMVRDRG----EELMRRGEEARVVAEKLRREITDLERVFEKASALSDAAENLFR 629

Query: 620 MSEKEV 625
           ++E  V
Sbjct: 630 LTEDRV 635



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 21/201 (10%)

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NR  + +DL GN +   GA  IA+++K N  +  +D+A N IG  G   L+  L  +  +
Sbjct: 169 NRHYSVLDLSGNRLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLLARALLENDTV 228

Query: 474 NTLKLGW------CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
            +L +G         IG  GAE   ++LR N  ++ L++ +NGL      G  G++F  S
Sbjct: 229 ISLDIGARAGTNGNHIGTPGAEAFGEVLRRNKVLARLNVSSNGL------GAVGVAFIAS 282

Query: 528 AIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF----AIA 581
           A+   + +   +L  N L   GA+ LA   +V +  +T  +L  N + D G      A+A
Sbjct: 283 ALEHSRSLTCLNLSSNNLGFDGARVLASRLEVAH--VTRWELPRNYLGDKGGACLLDALA 340

Query: 582 QALKANEDVAVTSLNLANNFL 602
            A++   DV V  L+L +N L
Sbjct: 341 GAIRNGHDV-VEYLDLDDNTL 360


>gi|406942580|gb|EKD74779.1| NLR family, CARD protein [uncultured bacterium]
          Length = 318

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 36/298 (12%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N  +R+L+L            LA  L GN ++  L+L GN I D G + L   L   +  
Sbjct: 14  NMNVRNLNLANKRLNDADLKDLAAALNGNSTIETLNLTGNRISDAGAKDLAEALKVNR-T 72

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  L + +N +S  GA  +AE  +   +L+ INL  N I D GA+ +A ALK+NRTI T+
Sbjct: 73  LRTLILLDNIVSDAGAKDLAEAFEVNSTLITINLLGNRISDGGAKDLAAALKKNRTIETL 132

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N I   GA  +A  LK NS +T+LDL  N I   G K L+E LK +  +  L L  
Sbjct: 133 VLKENKISDLGAKDLAEALKVNSSLTTLDLENNEISDVGVKELAEALKVNRTLKKLNLSS 192

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
            ++  +G + +A+ L+ N++++ L+L  N     V                         
Sbjct: 193 IRVSDAGVKELAEALKVNSSLTTLELNLN-----VIGNV--------------------- 226

Query: 541 CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                 G + LAQ+ + VN  L  ++LA+ EI D    A   AL+ N    VT +N++
Sbjct: 227 ------GVQALAQALR-VNRMLKVLNLAYAEIDDVDVQAFIDALEENH--IVTEINVS 275



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 29/280 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++ A   +  A +K     L  N  ++TLNL+GN I                  
Sbjct: 14  NMNVRNLNLANKRLNDADLKDLAAALNGNSTIETLNLTGNRIS----------------- 56

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
                      D GAK +AE LK N  LR L L +N++  +G   LAEA   NST+ +++
Sbjct: 57  -----------DAGAKDLAEALKVNRTLRTLILLDNIVSDAGAKDLAEAFEVNSTLITIN 105

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L GN     GA  LA  L+ N+++  L L  N I D G + L   L      L  LD+ N
Sbjct: 106 LLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKV-NSSLTTLDLEN 164

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N IS  G   +AE +K  ++L  +NL    + D G +++A+ALK N ++TT++L  N I 
Sbjct: 165 NEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIG 224

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           + G  A+A+ L+ N ++  L+LAY  I     +A  + L+
Sbjct: 225 NVGVQALAQALRVNRMLKVLNLAYAEIDDVDVQAFIDALE 264



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 121/260 (46%), Gaps = 29/260 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             +++++G    D G   LAE+L  N+T   +    N ++ AG K      + N  L T+
Sbjct: 45  IETLNLTGNRISDAGAKDLAEALKVNRTLRTLILLDNIVSDAGAKDLAEAFEVNSTLITI 104

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NL GN I D G K L   L  N  +E L L    + D GAK +AE LK NS L  L+L N
Sbjct: 105 NLLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKVNSSLTTLDLEN 164

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G   LAEAL  N T++ L+L+       G   LA+ L+ N SL  L L+ N IG
Sbjct: 165 NEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIG 224

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G++AL                             A+ ++  + L  +NL   +I D  
Sbjct: 225 NVGVQAL-----------------------------AQALRVNRMLKVLNLAYAEIDDVD 255

Query: 404 AEKIADALKQNRTITTIDLG 423
            +   DAL++N  +T I++ 
Sbjct: 256 VQAFIDALEENHIVTEINVS 275



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+ R   ++ +      D G   LAE+L  N +   +    N I+  G+K     L+ N 
Sbjct: 124 KKNRTIETLVLKENKISDLGAKDLAEALKVNSSLTTLDLENNEISDVGVKELAEALKVNR 183

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK LNLS   + D GVK L + L  N+ +  L+L+   + + G +A+A+ L+ N +L+V
Sbjct: 184 TLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIGNVGVQALAQALRVNRMLKV 243

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           L L    ID     +  +AL EN  +  +++
Sbjct: 244 LNLAYAEIDDVDVQAFIDALEENHIVTEINV 274



 Score = 42.4 bits (98), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 48/104 (46%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  K  R    +++S     D G+  LAE+L  N +   +    N I   G++A  
Sbjct: 173 KELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIGNVGVQALA 232

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
             L+ N  LK LNL+   I D  V+   D L +N  V  + +S+
Sbjct: 233 QALRVNRMLKVLNLAYAEIDDVDVQAFIDALEENHIVTEINVST 276


>gi|340052758|emb|CCC47042.1| putative ribonuclease inhibitor-like protein [Trypanosoma vivax
           Y486]
          Length = 735

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 181/385 (47%), Gaps = 49/385 (12%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G    + +  IL  N     L LS   L D GA  IA+L+  N  L  + L +N I + 
Sbjct: 144 LGPTCAEVIAHILSSNTKYIILDLSGNRLLDAGACFIAKLISVNRTLVHIGLRSNDIGHV 203

Query: 290 GFTSLAEALLENSTIRSLH------LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           G  +LA ALL+N+T+ SL       +NGN+    GA A+   L  NK L  L+L  N +G
Sbjct: 204 GGEALANALLQNNTVVSLDVGAHSGINGNHIATEGAKAIGNVLRTNKVLSNLNLSSNGLG 263

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             GI  + +GL      L  LDI  N +   G   +++ ++N  S+  ++L  N+I D G
Sbjct: 264 VPGITHIAAGLDGNYS-LTHLDISVNGLGYAGVKIISQVLEN-SSITHLSLQRNNITDNG 321

Query: 404 A----EKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
                + IA A++     I  +++  N ++ K A A+ +VL  +S + +L ++ N  G+ 
Sbjct: 322 GMVLFQAIATAIENGEDRIEFLNVESNELNEKTAKALQKVLSTSSALKNLRVSSNGFGS- 380

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
            +K + E L  +  +N+L + +C+I  +        L  N+T+  LDL  N LRD     
Sbjct: 381 SSKFIMEGLVENKGLNSLHMSFCEIRDTDGAPFGTALSANSTLQHLDLSNNKLRD----- 435

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                       G  C+A++ K  N  L +++LA N+I D+G  
Sbjct: 436 ---------------------------AGTICIAEAMK-TNAGLVTLNLACNKITDEGGK 467

Query: 579 AIAQALKANEDVAVTSLNLANNFLT 603
           AIA  L++N    +  LNL  N ++
Sbjct: 468 AIAMFLRSNN--TLRDLNLRRNCMS 490



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 168/354 (47%), Gaps = 14/354 (3%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN-- 224
           +D+SG    D G  F+A+ +  N+T   +   +N I   G +A    L  N  + +L+  
Sbjct: 165 LDLSGNRLLDAGACFIAKLISVNRTLVHIGLRSNDIGHVGGEALANALLQNNTVVSLDVG 224

Query: 225 ----LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
               ++GN I  EG K + ++L  N  +  L LSS  L   G   IA  L  N  L  L+
Sbjct: 225 AHSGINGNHIATEGAKAIGNVLRTNKVLSNLNLSSNGLGVPGITHIAAGLDGNYSLTHLD 284

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY----GGALGANALAKGLE-GNKSLREL 335
           ++ N + Y+G   +++ +LENS+I  L L  N     GG +   A+A  +E G   +  L
Sbjct: 285 ISVNGLGYAGVKIISQ-VLENSSITHLSLQRNNITDNGGMVLFQAIATAIENGEDRIEFL 343

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           ++  N + ++  +AL   LS+    L  L + +N   +   F +   ++N K L  +++ 
Sbjct: 344 NVESNELNEKTAKALQKVLSTSSA-LKNLRVSSNGFGSSSKFIMEGLVEN-KGLNSLHMS 401

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             +I D        AL  N T+  +DL  N +   G   IA  +K N+ + +L+LA N I
Sbjct: 402 FCEIRDTDGAPFGTALSANSTLQHLDLSNNKLRDAGTICIAEAMKTNAGLVTLNLACNKI 461

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
             +G KA++  L+ +  +  L L    +  S  E + + LR N T+  +D+  N
Sbjct: 462 TDEGGKAIAMFLRSNNTLRDLNLRRNCMSHSTGELLDEQLRSNTTLEKMDVTYN 515



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 38/288 (13%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           K  +LD+  N +   GA  +A+ I   ++L+ I L  NDIG  G E +A+AL QN T+ +
Sbjct: 161 KYIILDLSGNRLLDAGACFIAKLISVNRTLVHIGLRSNDIGHVGGEALANALLQNNTVVS 220

Query: 420 IDLG------GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           +D+G      GN+I ++GA AI  VL+ N V+++L+L+ N +G  G   ++  L  + ++
Sbjct: 221 LDVGAHSGINGNHIATEGAKAIGNVLRTNKVLSNLNLSSNGLGVPGITHIAAGLDGNYSL 280

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE------------VCSGCNG 521
             L +    +G +G + ++ +L  N++I+ L L+ N + D             + +G + 
Sbjct: 281 THLDISVNGLGYAGVKIISQVLE-NSSITHLSLQRNNITDNGGMVLFQAIATAIENGEDR 339

Query: 522 LSFFH--------SAIYSLKHMLFYSLCINYLQ--------GAKCLAQSFKVVNEALTSI 565
           + F +            +L+ +L  S  +  L+         +K + +   V N+ L S+
Sbjct: 340 IEFLNVESNELNEKTAKALQKVLSTSSALKNLRVSSNGFGSSSKFIMEGL-VENKGLNSL 398

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            ++F EIRD        AL AN    +  L+L+NN L   G   + +A
Sbjct: 399 HMSFCEIRDTDGAPFGTALSANS--TLQHLDLSNNKLRDAGTICIAEA 444



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 36/297 (12%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  S++++S    G  G+  +A  L  N +   +  + NG+  AG+K    VL+ N ++ 
Sbjct: 250 KVLSNLNLSSNGLGVPGITHIAAGLDGNYSLTHLDISVNGLGYAGVKIISQVLE-NSSIT 308

Query: 222 TLNLSGNPIGDEGVKCLCDIL---VDNAG--VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            L+L  N I D G   L   +   ++N    +E L + S +L ++ AKA+ ++L  +S L
Sbjct: 309 HLSLQRNNITDNGGMVLFQAIATAIENGEDRIEFLNVESNELNEKTAKALQKVLSTSSAL 368

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           + L +++N     GF S ++ ++E                        GL  NK L  LH
Sbjct: 369 KNLRVSSN-----GFGSSSKFIME------------------------GLVENKGLNSLH 399

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +    I D       + LS+    L  LD+ NN +   G   +AE +K    L+ +NL  
Sbjct: 400 MSFCEIRDTDGAPFGTALSA-NSTLQHLDLSNNKLRDAGTICIAEAMKTNAGLVTLNLAC 458

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           N I DEG + IA  L+ N T+  ++L  N +       +   L+ N+ +  +D+ YN
Sbjct: 459 NKITDEGGKAIAMFLRSNNTLRDLNLRRNCMSHSTGELLDEQLRSNTTLEKMDVTYN 515



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 115/241 (47%), Gaps = 28/241 (11%)

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           NCK   +  L  + +G   AE IA  L  N     +DL GN +   GA  IA+++  N  
Sbjct: 131 NCKGTFFC-LKESGLGPTCAEVIAHILSSNTKYIILDLSGNRLLDAGACFIAKLISVNRT 189

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC------QIGASGAEFVADMLRYN 498
           +  + L  N IG  G +AL+  L  +  + +L +G         I   GA+ + ++LR N
Sbjct: 190 LVHIGLRSNDIGHVGGEALANALLQNNTVVSLDVGAHSGINGNHIATEGAKAIGNVLRTN 249

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAI---YSLKHMLFYSLCINYL--QGAKCLAQ 553
             +S L+L +NGL      G  G++   + +   YSL H+    + +N L   G K ++Q
Sbjct: 250 KVLSNLNLSSNGL------GVPGITHIAAGLDGNYSLTHL---DISVNGLGYAGVKIISQ 300

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAF----AIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
             +  N ++T + L  N I D+G      AIA A++  ED  +  LN+ +N L +    A
Sbjct: 301 VLE--NSSITHLSLQRNNITDNGGMVLFQAIATAIENGED-RIEFLNVESNELNEKTAKA 357

Query: 610 L 610
           L
Sbjct: 358 L 358



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  ++ +S   FG    F + E L  N+    +  +   I       F   L +N  L+ 
Sbjct: 367 ALKNLRVSSNGFGSSSKFIM-EGLVENKGLNSLHMSFCEIRDTDGAPFGTALSANSTLQH 425

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D G  C+ + +  NAG+  L L+   + DEG KAIA  L++N+ LR L L 
Sbjct: 426 LDLSNNKLRDAGTICIAEAMKTNAGLVTLNLACNKITDEGGKAIAMFLRSNNTLRDLNLR 485

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALG-ANALAKGLEGNKSL 332
            N + +S    L E L  N+T+  + +  N   Y   +G    LA+  E NKSL
Sbjct: 486 RNCMSHSTGELLDEQLRSNTTLEKMDVTYNDFPYKCLIGNRTTLARNAEKNKSL 539


>gi|296215583|ref|XP_002754192.1| PREDICTED: uncharacterized protein C14orf166B [Callithrix jacchus]
          Length = 471

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYMNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++ L  N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNQLGLKGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L++  G L  LD+  N    +GA  +   ++   +L  +NL 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLATNVG-LTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+EGA  + + L+ N  +  +D+ GN+I ++GAS I+R L+ N  +  L L  NPI
Sbjct: 266 MNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISRGLESNESLKVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 SVDGA 330



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T  ++    NGIT  GI +   +LQ N  L+ +N
Sbjct: 91  SYMNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G +G + + D L  N + +  L+LS  D ++E A  + ++L +N  ++ L+L++
Sbjct: 151 ISNNQLGLKGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N+    GA AL  GL GN +L +L+L  N +G
Sbjct: 211 NQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+  N IS +GA  ++  +++ +SL  + L++N I  +G
Sbjct: 271 NEGALALGEVL-RLNSCLVYLDVSGNDISNEGASKISRGLESNESLKVLKLFLNPISVDG 329

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 330 ALLLILSIKRN 340



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N  G  GA  
Sbjct: 104 GTKAIAIALVSNTTVTKLELEDNGITEEGILSLVEMLQENYYLQEMNISNNQLGLKGARI 163

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  LE N  S+  L L GN   +E    L   LSS   ++  LD+ +N  S  G  H+ 
Sbjct: 164 ISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNY-RIKKLDLSHNQFSDVGGEHLG 222

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N T+T ++L  N + ++GA A+  VL+
Sbjct: 223 QMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLGNEGALALGEVLR 282

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD++ N I  +GA  +S  L+ + ++  LKL    I   GA
Sbjct: 283 LNSCLVYLDVSGNDISNEGASKISRGLESNESLKVLKLFLNPISVDGA 330



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 35/299 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EGI +L+  L      L  ++I
Sbjct: 93  MNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  KGA  ++++++   S +W + L  ND  +E A  +   L  N  I  +DL  N
Sbjct: 152 SNNQLGLKGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 212 QFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N+ +  LD+  N + +E                               
Sbjct: 272 EGALALGEVLRLNSCLVYLDVSGNDISNE------------------------------- 300

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            GA  +++  +  NE+L  + L  N I  DGA  +  ++K N    +  L+++N  +++
Sbjct: 301 -GASKISRGLE-SNESLKVLKLFLNPISVDGALLLILSIKRNPKSRMEELDISNVLVSE 357



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 37/237 (15%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N T+T ++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YMNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G  GA+ +S+ L+ +  +I +L+L         A  +  
Sbjct: 136 LVEMLQENYYLQEMNISNNQLGLKGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
           +L  N  I  LDL  N   D                                 G + L Q
Sbjct: 196 VLSSNYRIKKLDLSHNQFSD--------------------------------VGGEHLGQ 223

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
                N  LTS+DL++N     GA A+   L+ N  V +T LNL+ N L   G  AL
Sbjct: 224 ML-ATNVGLTSLDLSWNHFHTRGAVALCNGLRGN--VTLTKLNLSMNGLGNEGALAL 277



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 29/210 (13%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+++SG +F +E    L + L  N   +++  + N  +  G +    +L +N+ L +L+L
Sbjct: 177 SLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDL 236

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N     G   LC+ L  N  + +L LS   L +EGA A+ E+L+ NS L  L+++ N 
Sbjct: 237 SWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLGNEGALALGEVLRLNSCLVYLDVSGND 296

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I                               GA+ +++GLE N+SL+ L L  N I  +
Sbjct: 297 ISNE----------------------------GASKISRGLESNESLKVLKLFLNPISVD 328

Query: 346 G-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  ++S   + K ++  LDI N  +S +
Sbjct: 329 GALLLILSIKRNPKSRMEELDISNVLVSEQ 358



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 2/162 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S   F D G   L + L  N     +  + N     G  A    L+ N+ L  LNLS
Sbjct: 206 LDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLS 265

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G+EG   L ++L  N+ +  L +S  D+ +EGA  I+  L++N  L+VL+L  N I
Sbjct: 266 MNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISRGLESNESLKVLKLFLNPI 325

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
              G   L  ++  N   R   L  +    L +    K L+G
Sbjct: 326 SVDGALLLILSIKRNPKSRMEEL--DISNVLVSEQFVKTLDG 365


>gi|320165553|gb|EFW42452.1| hypothetical protein CAOG_07295 [Capsaspora owczarzaki ATCC 30864]
          Length = 420

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 118/226 (52%), Gaps = 12/226 (5%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GA  A  +A+ L+ +K++ +L     ++GD G +A+   L      L  L +  N I   
Sbjct: 27  GAAEAQVIAEALKVSKTMADL-----AVGDAGAQAIAEALKV-GTTLIRLSLHRNLIGEV 80

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K  K+L +++L  N IGD GA+ IA+ALK N T+T +DL  N I   GA A
Sbjct: 81  GAKAIAEALKVNKTLEYLDLSSNQIGDAGAQAIAEALKVNTTVTYLDLHNNQIGDAGAKA 140

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N  +T L+   N IG  GAKAL+  L+ + N+ TL L   +IG +GA   A  
Sbjct: 141 IAEPLKGNKTLTELNFERNWIGNAGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARA 200

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
           +  N T+  LDL  N      C G  G+     A  S+    + +L
Sbjct: 201 ITQNITLRHLDLLFN------CMGIAGIQMIDRAFLSVTGSAYPTL 240



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 101/204 (49%), Gaps = 29/204 (14%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+AIAE LK  + L  L L+ N+I   G  ++AEAL  N T+  L L+ N  G  GA
Sbjct: 51  DAGAQAIAEALKVGTTLIRLSLHRNLIGEVGAKAIAEALKVNKTLEYLDLSSNQIGDAGA 110

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ N ++  L LH N IGD G +A                             +
Sbjct: 111 QAIAEALKVNTTVTYLDLHNNQIGDAGAKA-----------------------------I 141

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE +K  K+L  +N   N IG+ GA+ +A AL+ N  + T+ L  N I   GA A AR +
Sbjct: 142 AEPLKGNKTLTELNFERNWIGNAGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARAI 201

Query: 440 KDNSVITSLDLAYNPIGADGAKAL 463
             N  +  LDL +N +G  G + +
Sbjct: 202 TQNITLRHLDLLFNCMGIAGIQMI 225



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 94/191 (49%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M+    GD G   +AE+L    T   +S   N I   G KA    L+ N  L+ L+LS N
Sbjct: 44  MADLAVGDAGAQAIAEALKVGTTLIRLSLHRNLIGEVGAKAIAEALKVNKTLEYLDLSSN 103

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N  V  L L +  + D GAKAIAE LK N  L  L    N I  
Sbjct: 104 QIGDAGAQAIAEALKVNTTVTYLDLHNNQIGDAGAKAIAEPLKGNKTLTELNFERNWIGN 163

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  +LA AL  N+ + +L L+ N  G  GA A A+ +  N +LR L L  N +G  GI+
Sbjct: 164 AGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARAITQNITLRHLDLLFNCMGIAGIQ 223

Query: 349 ALMSGLSSRKG 359
            +     S  G
Sbjct: 224 MIDRAFLSVTG 234



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 95/176 (53%), Gaps = 5/176 (2%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +AE+L  ++T  +++     +  AG +A    L+    L  L+L  N IG+ G K + +
Sbjct: 33  VIAEALKVSKTMADLA-----VGDAGAQAIAEALKVGTTLIRLSLHRNLIGEVGAKAIAE 87

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L  N  +E L LSS  + D GA+AIAE LK N+ +  L+L+NN I  +G  ++AE L  
Sbjct: 88  ALKVNKTLEYLDLSSNQIGDAGAQAIAEALKVNTTVTYLDLHNNQIGDAGAKAIAEPLKG 147

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           N T+  L+   N+ G  GA ALA+ LE N ++  L L  N IGD G  A    ++ 
Sbjct: 148 NKTLTELNFERNWIGNAGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARAITQ 203



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 43/204 (21%)

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           Q R  + +D   + I +  A  IA  LK +   T  DLA   +G  GA+A++E LK    
Sbjct: 15  QGRFCSAMD---DQIGAAEAQVIAEALKVSK--TMADLA---VGDAGAQAIAEALKVGTT 66

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           +  L L    IG  GA+ +A+ L+ N T+  LDL +N + D                   
Sbjct: 67  LIRLSLHRNLIGEVGAKAIAEALKVNKTLEYLDLSSNQIGDA------------------ 108

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                         GA+ +A++ KV N  +T +DL  N+I D GA AIA+ LK N+   +
Sbjct: 109 --------------GAQAIAEALKV-NTTVTYLDLHNNQIGDAGAKAIAEPLKGNK--TL 151

Query: 593 TSLNLANNFLTKFGQSALTDAKDL 616
           T LN   N++   G  AL  A ++
Sbjct: 152 TELNFERNWIGNAGAKALARALEV 175



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 60/138 (43%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    +D+S    GD G   +AE+L  N T   +    N I  AG KA    L+ N  L 
Sbjct: 93  KTLEYLDLSSNQIGDAGAQAIAEALKVNTTVTYLDLHNNQIGDAGAKAIAEPLKGNKTLT 152

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN   N IG+ G K L   L  N  V  L L    + D GA A A  +  N  LR L+L
Sbjct: 153 ELNFERNWIGNAGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARAITQNITLRHLDL 212

Query: 282 NNNMIDYSGFTSLAEALL 299
             N +  +G   +  A L
Sbjct: 213 LFNCMGIAGIQMIDRAFL 230


>gi|326428860|gb|EGD74430.1| hypothetical protein PTSG_12362 [Salpingoeca sp. ATCC 50818]
          Length = 647

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 1/175 (0%)

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           TI +  L+ +  G +GA A+A+ L+ N  L+ L L  NSIG EG  AL   L      L 
Sbjct: 4   TIWNYSLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLK-HNTTLE 62

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +L++ NN I  +GA  +AE +K+  +L  + L  N IG EGA  +A+ LK N T+T + L
Sbjct: 63  ILNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGL 122

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             N+I  KGA A+A +LK N+ +T L L  NPI  +GA AL+E+LK +  +  L+
Sbjct: 123 SNNSIGDKGAVALAEMLKHNTTLTWLGLQINPISDEGAVALAEMLKHNTALEELR 177



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 95/170 (55%), Gaps = 2/170 (1%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D  G   GD G   +AE+L  N   + +   AN I   G  A   +L+ N  L+ LNL
Sbjct: 9   SLDDDG--LGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNL 66

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             NPIGDEG   L ++L  N  +E L+LS   +  EGA A+AE+LK+N+ L VL L+NN 
Sbjct: 67  DNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNS 126

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           I   G  +LAE L  N+T+  L L  N     GA ALA+ L+ N +L EL
Sbjct: 127 IGDKGAVALAEMLKHNTTLTWLGLQINPISDEGAVALAEMLKHNTALEEL 176



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 99/191 (51%), Gaps = 29/191 (15%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  + +GD G + + + L DN  ++ L L +  +  EGA A+AE+LK+N+ L +L L+N
Sbjct: 9   SLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNLDN 68

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  +LAE L  N+ +  L L+ N  G  GA ALA+ L+ N +L  L L  NSIG
Sbjct: 69  NPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIG 128

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D                             KGA  +AE +K+  +L W+ L +N I DEG
Sbjct: 129 D-----------------------------KGAVALAEMLKHNTTLTWLGLQINPISDEG 159

Query: 404 AEKIADALKQN 414
           A  +A+ LK N
Sbjct: 160 AVALAEMLKHN 170



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 7/182 (3%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  VAE +K+   L  + L+ N IG EGA  +A+ LK N T+  ++L  N I  +GA A
Sbjct: 19  GARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNLDNNPIGDEGAVA 78

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A +LK N+ +  L L+ N IG +GA AL+E+LK +  +  L L    IG  GA  +A+M
Sbjct: 79  LAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIGDKGAVALAEM 138

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK-------HMLFYSLCINYLQG 547
           L++N T++ L L+ N + DE       +   ++A+  L+       H    +L I  +QG
Sbjct: 139 LKHNTTLTWLGLQINPISDEGAVALAEMLKHNTALEELRERRPTMWHKPTATLPITSIQG 198

Query: 548 AK 549
            K
Sbjct: 199 LK 200



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 36/200 (18%)

Query: 390 LWINLYMND--IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +W N  ++D  +GD GA  +A+ALK N  + T+ L  N+I  +GA A+A +LK N+ +  
Sbjct: 5   IW-NYSLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEI 63

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L+L  NPIG +GA AL+E+LK +  +  L+L    IG  GA  +A+ML++N T+++L L 
Sbjct: 64  LNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLS 123

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            N + D                                +GA  LA+  K  N  LT + L
Sbjct: 124 NNSIGD--------------------------------KGAVALAEMLK-HNTTLTWLGL 150

Query: 568 AFNEIRDDGAFAIAQALKAN 587
             N I D+GA A+A+ LK N
Sbjct: 151 QINPISDEGAVALAEMLKHN 170



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 86/155 (55%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   +G+   G +A    L+ N  LKTL L  N IG EG   L ++L  N  +E L L +
Sbjct: 9   SLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNLDN 68

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + DEGA A+AE+LK+N+ L  L L+ N I   G  +LAE L  N+T+  L L+ N  G
Sbjct: 69  NPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIG 128

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             GA ALA+ L+ N +L  L L  N I DEG  AL
Sbjct: 129 DKGAVALAEMLKHNTTLTWLGLQINPISDEGAVAL 163



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 63/126 (50%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K       +++     GDEG   LAE L +N   EE+  + N I   G  A   +
Sbjct: 51  LAEMLKHNTTLEILNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEM 110

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L  L LS N IGD+G   L ++L  N  +  L L    + DEGA A+AE+LK+N
Sbjct: 111 LKHNTTLTVLGLSNNSIGDKGAVALAEMLKHNTTLTWLGLQINPISDEGAVALAEMLKHN 170

Query: 274 SILRVL 279
           + L  L
Sbjct: 171 TALEEL 176



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 46/99 (46%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K   A   + +S  + G EG   LAE L +N T   +  + N I   G  A   +
Sbjct: 79  LAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIGDKGAVALAEM 138

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           L+ N  L  L L  NPI DEG   L ++L  N  +E L+
Sbjct: 139 LKHNTTLTWLGLQINPISDEGAVALAEMLKHNTALEELR 177


>gi|320169484|gb|EFW46383.1| protein kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 1064

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 148/303 (48%), Gaps = 18/303 (5%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA+ +A+ L+ N +L  L L+ N IG  G   L + L +   +LA+L +  N I  +
Sbjct: 59  GPKGAHVIAEELKVNTTLVALGLYNNDIGPVGANELATVLGTESSRLAILALFENHIGDE 118

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A  +KN K+L  + L  N IG+ GA  +A AL+ N ++T + L  N+I   GA A
Sbjct: 119 GAIAMALALKNNKTLTQLYLANNKIGEVGARALALALQTNSSLTGLSLHENSIGDAGALA 178

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  L  N+ +T L L  N IG  GA A++  L  +  +  L L    IG +GAE +A  
Sbjct: 179 IAEALAVNTSMTELYLHTNGIGDPGAIAIATALTKNKTLTRLALEQNNIGKAGAEKIAAA 238

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L+ N +++ LDL  N +  +V       S        L H           Q +  + QS
Sbjct: 239 LKENESLTELDLGENEIPSDVVKKFKAPSDKKKCTIRLDH-----------QKSASVVQS 287

Query: 555 ----FKVVNEALT-SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
                 +V +A + S++L   +I +    AI++A+  N    +T +NL NN L   G   
Sbjct: 288 EPSIVSIVGKATSGSLNLESKKIAELAMEAISRAIVTNG--TITKMNLKNNTLADIGARL 345

Query: 610 LTD 612
           L +
Sbjct: 346 LVE 348



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 173/396 (43%), Gaps = 40/396 (10%)

Query: 155 NEFAKELRAFSSVDMSGR------NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +E+ +E R   S    GR        G +G   +AE L  N T   +    N I   G  
Sbjct: 33  HEWQQEDRRVPSQKDQGRARFRDQEMGPKGAHVIAEELKVNTTLVALGLYNNDIGPVGAN 92

Query: 209 AFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
               VL +  + L  L L  N IGDEG   +   L +N  + +L L++  + + GA+A+A
Sbjct: 93  ELATVLGTESSRLAILALFENHIGDEGAIAMALALKNNKTLTQLYLANNKIGEVGARALA 152

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L+ NS L  L L+ N I  +G  ++AEAL  N+++  L+L+ N  G  GA A+A  L 
Sbjct: 153 LALQTNSSLTGLSLHENSIGDAGALAIAEALAVNTSMTELYLHTNGIGDPGAIAIATALT 212

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK--GAFHVAEYIKN 385
            NK+L  L L  N+IG  G   + + L   +  L  LD+G N I +     F      K 
Sbjct: 213 KNKTLTRLALEQNNIGKAGAEKIAAALKENES-LTELDLGENEIPSDVVKKFKAPSDKKK 271

Query: 386 CKSLL-------------------------WINLYMNDIGDEGAEKIADALKQNRTITTI 420
           C   L                          +NL    I +   E I+ A+  N TIT +
Sbjct: 272 CTIRLDHQKSASVVQSEPSIVSIVGKATSGSLNLESKKIAELAMEAISRAIVTNGTITKM 331

Query: 421 DLGGNNIHSKGASAIARVLKDNSV---ITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           +L  N +   GA  +   L D+ +   + SL+L  N IG DG   L ++L+    +  L 
Sbjct: 332 NLKNNTLADIGARLLVENLVDSKLHLNLVSLNLDSNNIGNDGMGHLCKLLEGSA-LQELS 390

Query: 478 LGWCQIGASGAEFVADMLR-YNNTISILDLRANGLR 512
           L    IG +GA+ +A  L         ++LR  G R
Sbjct: 391 LNHNWIGDAGAQAIASTLTATTRKFDQMELRLKGNR 426



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 145/349 (41%), Gaps = 69/349 (19%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GDEG   +A +L  N+T  ++  A N I   G +A    LQ+N +L  L+L  N IGD
Sbjct: 114 HIGDEGAIAMALALKNNKTLTQLYLANNKIGEVGARALALALQTNSSLTGLSLHENSIGD 173

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G   + + L  N  +  L L +  + D GA AIA  L  N  L  L L  N I  +G  
Sbjct: 174 AGALAIAEALAVNTSMTELYLHTNGIGDPGAIAIATALTKNKTLTRLALEQNNIGKAGAE 233

Query: 293 SLAEALLENS-----------------------------TIR------------------ 305
            +A AL EN                              TIR                  
Sbjct: 234 KIAAALKENESLTELDLGENEIPSDVVKKFKAPSDKKKCTIRLDHQKSASVVQSEPSIVS 293

Query: 306 --------SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
                   SL+L       L   A+++ +  N ++ +++L  N++ D G R L+  L   
Sbjct: 294 IVGKATSGSLNLESKKIAELAMEAISRAIVTNGTITKMNLKNNTLADIGARLLVENLVDS 353

Query: 358 KGKLAV--LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           K  L +  L++ +N+I   G  H+ + ++   +L  ++L  N IGD GA+ IA  L    
Sbjct: 354 KLHLNLVSLNLDSNNIGNDGMGHLCKLLEGS-ALQELSLNHNWIGDAGAQAIASTL---- 408

Query: 416 TITT-------IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           T TT       + L GN I   G  A+   LK  S    LDL+ N + A
Sbjct: 409 TATTRKFDQMELRLKGNRIGELGGDALLLALKPLSTQFKLDLSENRLPA 457



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 117/287 (40%), Gaps = 57/287 (19%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +A +L  N+T   ++   N I  AG +     L+ N +L  L+L  N I  +
Sbjct: 199 IGDPGAIAIATALTKNKTLTRLALEQNNIGKAGAEKIAAALKENESLTELDLGENEIPSD 258

Query: 234 GVKCL--------CDILVDN-------------------AGVERLQLSSVDLRDEGAKAI 266
            VK          C I +D+                   A    L L S  + +   +AI
Sbjct: 259 VVKKFKAPSDKKKCTIRLDHQKSASVVQSEPSIVSIVGKATSGSLNLESKKIAELAMEAI 318

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS---TIRSLHLNGNYGGALGANALA 323
           +  +  N  +  + L NN +   G   L E L+++     + SL+L+ N  G  G   L 
Sbjct: 319 SRAIVTNGTITKMNLKNNTLADIGARLLVENLVDSKLHLNLVSLNLDSNNIGNDGMGHLC 378

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           K LEG+ +L+EL L+ N IGD G +A+ S L++   K   +++                 
Sbjct: 379 KLLEGS-ALQELSLNHNWIGDAGAQAIASTLTATTRKFDQMEL----------------- 420

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                     L  N IG+ G + +  ALK   T   +DL  N + ++
Sbjct: 421 ---------RLKGNRIGELGGDALLLALKPLSTQFKLDLSENRLPAR 458


>gi|320169698|gb|EFW46597.1| hypothetical protein CAOG_04555 [Capsaspora owczarzaki ATCC 30864]
          Length = 640

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 114/224 (50%), Gaps = 29/224 (12%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           RL L    + DE AKAIAE LK N+ L  L L  N I  +G  ++AEAL  N+T+  L L
Sbjct: 23  RLLLHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGL 82

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G  GA A+A+ L+ NK++ +++L+ N IGD+G                       
Sbjct: 83  HQNQIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDG----------------------- 119

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
                 A  +AE  K   +L  ++L+ N IGD GA  IADALK N T+TT+ L  N I  
Sbjct: 120 ------ALAIAEAHKVNTTLTKLSLWANQIGDAGARAIADALKVNTTLTTVYLHQNQIGD 173

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            GA A A  LK N  +T L+L+ N +   G  AL +      N+
Sbjct: 174 AGAQANAEALKVNKTLTRLNLSQNFLTNVGIIALRQTANTDCNV 217



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 104/194 (53%), Gaps = 9/194 (4%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L LH + IGDE  +A+   L      L  L +  N I   GA  +AE +K   +L  + L
Sbjct: 24  LLLHKSQIGDEEAKAIAEALKV-NTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGL 82

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N IGD GA+ IA++LK N+T+T I L  N I   GA AIA   K N+ +T L L  N 
Sbjct: 83  HQNQIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWANQ 142

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN----- 509
           IG  GA+A+++ LK +  + T+ L   QIG +GA+  A+ L+ N T++ L+L  N     
Sbjct: 143 IGDAGARAIADALKVNTTLTTVYLHQNQIGDAGAQANAEALKVNKTLTRLNLSQNFLTNV 202

Query: 510 ---GLRDEVCSGCN 520
               LR    + CN
Sbjct: 203 GIIALRQTANTDCN 216



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 90/166 (54%), Gaps = 3/166 (1%)

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           R L     +  G+L    +  + I  + A  +AE +K   +L+ ++L+ N IGD GA  I
Sbjct: 11  RELYDQFKNASGRLL---LHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAI 67

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           A+ALK N T+T + L  N I   GA AIA  LK N  +T + L  N IG DGA A++E  
Sbjct: 68  AEALKMNTTLTELGLHQNQIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAH 127

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           K +  +  L L   QIG +GA  +AD L+ N T++ + L  N + D
Sbjct: 128 KVNTTLTKLSLWANQIGDAGARAIADALKVNTTLTTVYLHQNQIGD 173



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 111/208 (53%), Gaps = 9/208 (4%)

Query: 150 SKQTLNEFAKEL-RAFSSVDMSGR------NFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           S Q +N+  +EL   F +   SGR        GDE    +AE+L  N T  ++S  AN I
Sbjct: 2   SYQNMNQRQRELYDQFKNA--SGRLLLHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRI 59

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
             AG +A    L+ N  L  L L  N IGD G + + + L  N  V ++ L S  + D+G
Sbjct: 60  GDAGARAIAEALKMNTTLTELGLHQNQIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDG 119

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A AIAE  K N+ L  L L  N I  +G  ++A+AL  N+T+ +++L+ N  G  GA A 
Sbjct: 120 ALAIAEAHKVNTTLTKLSLWANQIGDAGARAIADALKVNTTLTTVYLHQNQIGDAGAQAN 179

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           A+ L+ NK+L  L+L  N + + GI AL
Sbjct: 180 AEALKVNKTLTRLNLSQNFLTNVGIIAL 207



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 29/211 (13%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  + IGDE  K + + L  N  + +L L +  + D GA+AIAE LK N+ L  L L+ N
Sbjct: 26  LHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGLHQN 85

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AE+L  N T+  ++L  N  G  GA A+A+  + N +L +L L  N IGD
Sbjct: 86  QIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWANQIGD 145

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G RA                             +A+ +K   +L  + L+ N IGD GA
Sbjct: 146 AGARA-----------------------------IADALKVNTTLTTVYLHQNQIGDAGA 176

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           +  A+ALK N+T+T ++L  N + + G  A+
Sbjct: 177 QANAEALKVNKTLTRLNLSQNFLTNVGIIAL 207



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 16/198 (8%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A AIA  LK N+ +  L L  N IG  GA+A++E LK +  +  L L   
Sbjct: 26  LHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGLHQN 85

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           QIG +GA+ +A+ L+ N T++ + L +N + D+   G   ++  H    +L  +   SL 
Sbjct: 86  QIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDD---GALAIAEAHKVNTTLTKL---SLW 139

Query: 542 INYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            N +   GA+ +A + K VN  LT++ L  N+I D GA A A+ALK N+   +T LNL+ 
Sbjct: 140 ANQIGDAGARAIADALK-VNTTLTTVYLHQNQIGDAGAQANAEALKVNK--TLTRLNLSQ 196

Query: 600 NFLTKFG-----QSALTD 612
           NFLT  G     Q+A TD
Sbjct: 197 NFLTNVGIIALRQTANTD 214



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 1/168 (0%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  L  L+L  N IGD G + + + L  N  +  L L    + D GA+AIA
Sbjct: 37  KAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGLHQNQIGDAGAQAIA 96

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E LK N  +  + L +N I   G  ++AEA   N+T+  L L  N  G  GA A+A  L+
Sbjct: 97  ESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWANQIGDAGARAIADALK 156

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            N +L  ++LH N IGD G +A    L   K  L  L++  N ++  G
Sbjct: 157 VNTTLTTVYLHQNQIGDAGAQANAEALKVNK-TLTRLNLSQNFLTNVG 203



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 7/187 (3%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMS-------GRNFGDEGLFFLAESLGYNQTAEEV 195
           +G+L     Q  +E AK +     V+ +           GD G   +AE+L  N T  E+
Sbjct: 21  SGRLLLHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTEL 80

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               N I  AG +A    L+ N  +  + L  N IGD+G   + +    N  + +L L +
Sbjct: 81  GLHQNQIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWA 140

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+AIA+ LK N+ L  + L+ N I  +G  + AEAL  N T+  L+L+ N+  
Sbjct: 141 NQIGDAGARAIADALKVNTTLTTVYLHQNQIGDAGAQANAEALKVNKTLTRLNLSQNFLT 200

Query: 316 ALGANAL 322
            +G  AL
Sbjct: 201 NVGIIAL 207



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 58/124 (46%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AESL  N+T  ++   +N I   G  A     + N  L  L+L  N IGD
Sbjct: 86  QIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWANQIGD 145

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + D L  N  +  + L    + D GA+A AE LK N  L  L L+ N +   G  
Sbjct: 146 AGARAIADALKVNTTLTTVYLHQNQIGDAGAQANAEALKVNKTLTRLNLSQNFLTNVGII 205

Query: 293 SLAE 296
           +L +
Sbjct: 206 ALRQ 209


>gi|410684076|ref|YP_006060083.1| leucine-rich-repeat type III effector protein (GALA1-like)
           [Ralstonia solanacearum CMR15]
 gi|299068565|emb|CBJ39793.1| leucine-rich-repeat type III effector protein (GALA1-like)
           [Ralstonia solanacearum CMR15]
          Length = 555

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 209/448 (46%), Gaps = 70/448 (15%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  S+ + GR F DE L  L  SL     A ++S     ITAAGI        S + L  
Sbjct: 134 ALESLTLEGR-FTDEDLATLPASL----KALDLSRCGRQITAAGIAHL-----SELPLAE 183

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+  N IGDEG +    +L  +  +  L ++S  + D GA+A+A     N+ L  L+++
Sbjct: 184 LNVRNNWIGDEGAR----LLAAHPTLTTLNVASNGIGDAGAQALAA----NTRLESLDIS 235

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G     +AL +N+T+++L+++ N  G  GA ALA     N +L EL+   N I
Sbjct: 236 FNEIGSDGV----QALADNATLKTLNISSNDIGDAGALALAV----NTTLTELNTSCNRI 287

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D G +AL +  S     L  LDI +N     G   +A   +    L  +++  N + + 
Sbjct: 288 SDAGAQALANSDS-----LTSLDISDNGFGDAGVQAIAANTR----LRRLDISRNRLSEA 338

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G   +A     N T+T + +    I + GA A+A     N+ + SLD  +N IG +GA+A
Sbjct: 339 GVLAVA----ANTTLTKLCIADCEIGTAGAQALAA----NTRLVSLDAGHNGIGTEGAQA 390

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           L+     H  +  L L    IG +GA   AD    N T+  L+L+   + D      +GL
Sbjct: 391 LAR----HATLKQLNLEKNPIGDAGAVAFAD----NATLRSLNLKGCKVTD------SGL 436

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
                A  +    L  S      +GAK  A      N  LTS+D++ N I D+GA A+A 
Sbjct: 437 RVL--ATNATLRTLNVSDNRITAEGAKATA-----ANSTLTSLDVSHNGIEDEGALALAA 489

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSAL 610
                 +  +  LN+  N LT  G +AL
Sbjct: 490 ------NTVLNVLNICYNALTVKGVTAL 511



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 172/367 (46%), Gaps = 65/367 (17%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            ++++++    GD G    A++L  N   E +  + N I + G++A    L  N  LKTL
Sbjct: 205 LTTLNVASNGIGDAG----AQALAANTRLESLDISFNEIGSDGVQA----LADNATLKTL 256

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           N+S N IGD G   L      N  +  L  S   + D GA+A+A    N+  L  L++++
Sbjct: 257 NISSNDIGDAGALALA----VNTTLTELNTSCNRISDAGAQALA----NSDSLTSLDISD 308

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N    +G     +A+  N+ +R L ++ N     G  A+A     N +L +L +    IG
Sbjct: 309 NGFGDAGV----QAIAANTRLRRLDISRNRLSEAGVLAVA----ANTTLTKLCIADCEIG 360

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G +AL +       +L  LD G+N I  +GA  +A +     +L  +NL  N IGD G
Sbjct: 361 TAGAQALAA-----NTRLVSLDAGHNGIGTEGAQALARH----ATLKQLNLEKNPIGDAG 411

Query: 404 AEKIAD--------------------ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           A   AD                     L  N T+ T+++  N I ++GA A A     NS
Sbjct: 412 AVAFADNATLRSLNLKGCKVTDSGLRVLATNATLRTLNVSDNRITAEGAKATAA----NS 467

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +TSLD+++N I  +GA AL+     +  +N L + +  +   G   +A     + T+++
Sbjct: 468 TLTSLDVSHNGIEDEGALALA----ANTVLNVLNICYNALTVKGVTALA----ASTTLAV 519

Query: 504 LDLRANG 510
           LD+R NG
Sbjct: 520 LDIRENG 526



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 115/262 (43%), Gaps = 72/262 (27%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----SRKGKLAVLDIGNNSISAKGAFHV 379
           +  EG  +L  L L G    DE +  L + L     SR G+          I+A G  H+
Sbjct: 127 RDTEGYAALESLTLEGR-FTDEDLATLPASLKALDLSRCGR---------QITAAGIAHL 176

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E       L  +N+  N IGDEGA  +A     + T+TT+++  N I   GA A+A   
Sbjct: 177 SEL-----PLAELNVRNNWIGDEGARLLA----AHPTLTTLNVASNGIGDAGAQALAA-- 225

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N+ + SLD+++N IG+DG +AL++    +  + TL +    IG +GA           
Sbjct: 226 --NTRLESLDISFNEIGSDGVQALAD----NATLKTLNISSNDIGDAGA----------- 268

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVN 559
               L L  N    E+ + CN +S                       GA+ LA S     
Sbjct: 269 ----LALAVNTTLTELNTSCNRISD---------------------AGAQALANS----- 298

Query: 560 EALTSIDLAFNEIRDDGAFAIA 581
           ++LTS+D++ N   D G  AIA
Sbjct: 299 DSLTSLDISDNGFGDAGVQAIA 320


>gi|403264745|ref|XP_003924633.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 384

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N T  ++    NGIT  GI +   +LQ N  L+ LN
Sbjct: 4   SYVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELN 63

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D L  N + +  L+LS  D ++E A  + ++L +N  ++ L+L++
Sbjct: 64  ISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSH 123

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N+    GA AL  GL GN +L +L L  N +G
Sbjct: 124 NQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 183

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+  N IS +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 184 NEGALALGEVL-RLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDG 242

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 243 ALLLILSIKRN 253



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 2/239 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L+ L ++
Sbjct: 6   VNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELNIS 65

Query: 283 NNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NN +   G   +++ L  N S+I SL L+GN      A  L + L  N  +++L L  N 
Sbjct: 66  NNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQ 125

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
             D G   L   L++  G L  LD+  N    +GA  +   ++   +L  ++L MN +G+
Sbjct: 126 FSDVGGEHLGQMLATNVG-LTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 184

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           EGA  + + L+ N  +  +D+ GN+I ++GAS I++ L+ N  +  L L  NPI  DGA
Sbjct: 185 EGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDGA 243



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 118/228 (51%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 17  GTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELNISNNQLGLEGARI 76

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  LE N  S+  L L GN   +E    L   LSS   ++  LD+ +N  S  G  H+ 
Sbjct: 77  ISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNY-RIKKLDLSHNQFSDVGGEHLG 135

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N T+T +DL  N + ++GA A+  VL+
Sbjct: 136 QMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGALALGEVLR 195

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD++ N I  +GA  +S+ L+ + ++  LKL    I   GA
Sbjct: 196 LNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDGA 243



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 116/229 (50%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           LN++ +   G  ++A AL+ N+T+  L L  N     G  +L + L+ N  L+EL++  N
Sbjct: 8   LNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELNISNN 67

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +G EG R +   L +    +  L++  N    + A  + + + +   +  ++L  N   
Sbjct: 68  QLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFS 127

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D G E +   L  N  +T++DL  N+ H++GA A+   L+ N  +T LDL+ N +G +GA
Sbjct: 128 DVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGA 187

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            AL EVL+ +  +  L +    I   GA  ++  L  N ++ +L L  N
Sbjct: 188 LALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLN 236



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 139/280 (49%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    ++ L++ +N I+ +G   + E ++    L  +N+
Sbjct: 6   VNLNHHGLGPRGTKAIAIALVSNT-TVSKLELEDNGITEEGILSLVEMLQENYYLQELNI 64

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D L+ N + I +++L GN+   + A+ + +VL  N  I  LDL++N
Sbjct: 65  SNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHN 124

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NGL +
Sbjct: 125 QFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 184

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           E                +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 185 E-------------GALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLES-NESLKV 230

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  ++K N    +  L+++N  +++
Sbjct: 231 LKLFLNPISVDGALLLILSIKRNPKSRMEELDISNVLVSE 270



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
           +L E  +E      +++S    G EG   +++ L  N ++   +  + N           
Sbjct: 48  SLVEMLQENYYLQELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLC 107

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            VL SN  +K L+LS N   D G + L  +L  N G+  L LS       GA A+   L+
Sbjct: 108 QVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLR 167

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+ N +   G  +L E L  NS +  L ++GN     GA+ ++KGLE N+S
Sbjct: 168 GNVTLTKLDLSMNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNES 227

Query: 332 LRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           L+ L L  N I  +G +  ++S   + K ++  LDI N  +S +
Sbjct: 228 LKVLKLFLNPISVDGALLLILSIKRNPKSRMEELDISNVLVSEQ 271


>gi|291234686|ref|XP_002737275.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1052

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 29/248 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAIA  +  N    VL L +N I   G   + E L EN  ++ L+L+ N  G+ GA  
Sbjct: 22  GAKAIAATMVRNVFTSVLNLKDNDIGAEGSMYIIEMLTENVGVKILNLSENKLGSEGARL 81

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR-KGKLAVLDIGNNSISAKGAFHVA 380
           + + ++ N  L  LHL GN   +   +     L S     L  LD+ +N+ S KG     
Sbjct: 82  VCEVMDDNSYLTSLHLSGNGFRESDAKYFAELLKSEASSNLVELDLSHNNFSEKGG---- 137

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                                   E +A A+K+N+T+  +DL  N+   KGA A+ R  K
Sbjct: 138 ------------------------EWLAIAIKKNKTLKKLDLSWNHFRRKGAVALCRAFK 173

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +T LDL++N +  DGA  ++ VLK +  +  L +G+ +I   G   + D LRYN T
Sbjct: 174 MNTTLTYLDLSWNGLADDGAVVMAYVLKKNDTLRYLDVGFNRISRIGIAKLTDALRYNTT 233

Query: 501 ISILDLRA 508
           ++ L +R 
Sbjct: 234 LNELKVRT 241



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 16/271 (5%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I A G      +L  N+ +K LNLS N +G EG + +C+++ DN+ +  L LS    R
Sbjct: 44  NDIGAEGSMYIIEMLTENVGVKILNLSENKLGSEGARLVCEVMDDNSYLTSLHLSGNGFR 103

Query: 260 DEGAKAIAELLKN--NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           +  AK  AELLK+  +S L  L+L++N     G   LA A+ +N T++ L L+ N+    
Sbjct: 104 ESDAKYFAELLKSEASSNLVELDLSHNNFSEKGGEWLAIAIKKNKTLKKLDLSWNHFRRK 163

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA AL +  + N +L  L L  N + D+G   +M+ +  +   L  LD+G N IS  G  
Sbjct: 164 GAVALCRAFKMNTTLTYLDLSWNGLADDGA-VVMAYVLKKNDTLRYLDVGFNRISRIGIA 222

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA--I 435
            + + ++   +L           +E   +    L+ N T+  + + GN I  K ++A  +
Sbjct: 223 KLTDALRYNTTL-----------NELKVRTIYVLRYNTTLNELKVAGNTITHKASAAMLV 271

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           A      S I  LDL    +  +    L E+
Sbjct: 272 AIETSSQSSINVLDLGTESVTREFVDHLEEL 302



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 140/319 (43%), Gaps = 44/319 (13%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           AE V     G+   G KA    +  N+    LNL  N IG EG   + ++L +N GV+ L
Sbjct: 8   AESVCLQHYGLGPLGAKAIAATMVRNVFTSVLNLKDNDIGAEGSMYIIEMLTENVGVKIL 67

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            LS   L  EGA+ + E++ +NS L                             SLHL+G
Sbjct: 68  NLSENKLGSEGARLVCEVMDDNSYL----------------------------TSLHLSG 99

Query: 312 NYGGALGANALAKGL--EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           N      A   A+ L  E + +L EL L  N+  ++G   L   +   K  L  LD+  N
Sbjct: 100 NGFRESDAKYFAELLKSEASSNLVELDLSHNNFSEKGGEWLAIAIKKNK-TLKKLDLSWN 158

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
               KGA  +    K   +L +++L  N + D+GA  +A  LK+N T+  +D+G N I  
Sbjct: 159 HFRRKGAVALCRAFKMNTTLTYLDLSWNGLADDGAVVMAYVLKKNDTLRYLDVGFNRISR 218

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG--ASG 487
            G + +   L+ N+ +  L +               VL+++  +N LK+    I   AS 
Sbjct: 219 IGIAKLTDALRYNTTLNELKV-----------RTIYVLRYNTTLNELKVAGNTITHKASA 267

Query: 488 AEFVADMLRYNNTISILDL 506
           A  VA      ++I++LDL
Sbjct: 268 AMLVAIETSSQSSINVLDL 286



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 20/296 (6%)

Query: 312 NYG-GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           +YG G LGA A+A  +  N     L+L  N IG EG   ++  L+   G + +L++  N 
Sbjct: 15  HYGLGPLGAKAIAATMVRNVFTSVLNLKDNDIGAEGSMYIIEMLTENVG-VKILNLSENK 73

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT--ITTIDLGGNNIH 428
           + ++GA  V E + +   L  ++L  N   +  A+  A+ LK   +  +  +DL  NN  
Sbjct: 74  LGSEGARLVCEVMDDNSYLTSLHLSGNGFRESDAKYFAELLKSEASSNLVELDLSHNNFS 133

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            KG   +A  +K N  +  LDL++N     GA AL    K +  +  L L W  +   GA
Sbjct: 134 EKGGEWLAIAIKKNKTLKKLDLSWNHFRRKGAVALCRAFKMNTTLTYLDLSWNGLADDGA 193

Query: 489 EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
             +A +L+ N+T+  LD+           G N +S     I  L   L Y+  +N L+  
Sbjct: 194 VVMAYVLKKNDTLRYLDV-----------GFNRIS--RIGIAKLTDALRYNTTLNELKVR 240

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
                 +   N  L  + +A N I    + A+  A++ +   ++  L+L    +T+
Sbjct: 241 TIYVLRY---NTTLNELKVAGNTITHKASAAMLVAIETSSQSSINVLDLGTESVTR 293



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 42/246 (17%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS---------- 216
           +++S    G EG   + E +  N     +  + NG   +  K F  +L+S          
Sbjct: 67  LNLSENKLGSEGARLVCEVMDDNSYLTSLHLSGNGFRESDAKYFAELLKSEASSNLVELD 126

Query: 217 --------------------NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
                               N  LK L+LS N    +G   LC     N  +  L LS  
Sbjct: 127 LSHNNFSEKGGEWLAIAIKKNKTLKKLDLSWNHFRRKGAVALCRAFKMNTTLTYLDLSWN 186

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            L D+GA  +A +LK N  LR L++  N I   G   L +AL  N+T+  L +   Y   
Sbjct: 187 GLADDGAVVMAYVLKKNDTLRYLDVGFNRISRIGIAKLTDALRYNTTLNELKVRTIY--- 243

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL-SSRKGKLAVLDIGNNSISAKG 375
                    L  N +L EL + GN+I  +   A++  + +S +  + VLD+G  S++ + 
Sbjct: 244 --------VLRYNTTLNELKVAGNTITHKASAAMLVAIETSSQSSINVLDLGTESVTREF 295

Query: 376 AFHVAE 381
             H+ E
Sbjct: 296 VDHLEE 301



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 57/221 (25%)

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           S+ L +  +G  GAKA++  +  +   + L L    IGA G+ ++ +ML  N  + IL+L
Sbjct: 10  SVCLQHYGLGPLGAKAIAATMVRNVFTSVLNLKDNDIGAEGSMYIIEMLTENVGVKILNL 69

Query: 507 RANGLRDE----VCSGCNGLSFFHS----------------------------------- 527
             N L  E    VC   +  S+  S                                   
Sbjct: 70  SENKLGSEGARLVCEVMDDNSYLTSLHLSGNGFRESDAKYFAELLKSEASSNLVELDLSH 129

Query: 528 -------------AIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEI 572
                        AI   K +    L  N+   +GA  L ++FK +N  LT +DL++N +
Sbjct: 130 NNFSEKGGEWLAIAIKKNKTLKKLDLSWNHFRRKGAVALCRAFK-MNTTLTYLDLSWNGL 188

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            DDGA  +A  LK N+   +  L++  N +++ G + LTDA
Sbjct: 189 ADDGAVVMAYVLKKND--TLRYLDVGFNRISRIGIAKLTDA 227


>gi|224085459|ref|XP_002307582.1| predicted protein [Populus trichocarpa]
 gi|222857031|gb|EEE94578.1| predicted protein [Populus trichocarpa]
          Length = 522

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 136/270 (50%), Gaps = 1/270 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L++   L+ L L  + I +E  + +C+++     ++ L   +    
Sbjct: 224 NALGEKGVRAFGMLLKTQNILEELYLINDGISEEAARAVCELIPSTEKLKVLHFHNNMTG 283

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE+LK +++L     ++  +   G  +LAEAL   S +R L L  N  G    
Sbjct: 284 DEGAAAIAEMLKQSNLLEDFRCSSTRVGLEGGVALAEALGSCSHLRKLDLRDNMFGVEAG 343

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L     L E++L   ++ DEG  AL + L      L VLD+  N I+AKGA  +
Sbjct: 344 IALSKSLFAFADLTEVYLSYLNLEDEGAEALANALKESAPSLEVLDMAGNDITAKGASSL 403

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARV 438
              I   + L  +NL  N++ DEGA  IA A++  +  +  +DL  N I   GA  +A+ 
Sbjct: 404 VACIVAKQFLTKLNLAENELKDEGAILIAKAIEAGHDQLNEVDLSTNAIRRAGARLLAQA 463

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +       SL++  N I  +G   + ++ K
Sbjct: 464 VVHKPGFKSLNINGNYISDEGIDEVKDIFK 493



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 146/307 (47%), Gaps = 39/307 (12%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +  LEG K LR L+L  N++G++G+RA    L + +  L  L + N+ IS + A  V E
Sbjct: 207 FSSALEGCK-LRYLNLSNNALGEKGVRAFGMLLKT-QNILEELYLINDGISEEAARAVCE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I + + L  ++ + N  GDEGA  IA+ LKQ+  +         +  +G  A+A  L  
Sbjct: 265 LIPSTEKLKVLHFHNNMTGDEGAAAIAEMLKQSNLLEDFRCSSTRVGLEGGVALAEALGS 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
            S +  LDL  N  G +   ALS+ L    ++  + L +  +   GAE +A+ L+ +  +
Sbjct: 325 CSHLRKLDLRDNMFGVEAGIALSKSLFAFADLTEVYLSYLNLEDEGAEALANALKESAPS 384

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           + +LD+  N   D    G + L                  CI              V  +
Sbjct: 385 LEVLDMAGN---DITAKGASSLV----------------ACI--------------VAKQ 411

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 620
            LT ++LA NE++D+GA  IA+A++A  D  +  ++L+ N + + G   L  A  +V++ 
Sbjct: 412 FLTKLNLAENELKDEGAILIAKAIEAGHD-QLNEVDLSTNAIRRAGARLLAQA--VVHKP 468

Query: 621 SEKEVNI 627
             K +NI
Sbjct: 469 GFKSLNI 475



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 30/221 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE L  +   E+   ++  +   G  A    L S   L+ L+L  N  G E 
Sbjct: 283 GDEGAAAIAEMLKQSNLLEDFRCSSTRVGLEGGVALAEALGSCSHLRKLDLRDNMFGVEA 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L   A +  + LS ++L DEGA+A+A  LK ++  L VL++  N I   G +S
Sbjct: 343 GIALSKSLFAFADLTEVYLSYLNLEDEGAEALANALKESAPSLEVLDMAGNDITAKGASS 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRE------------------ 334
           L   ++    +  L+L  N     GA  +AK +E G+  L E                  
Sbjct: 403 LVACIVAKQFLTKLNLAENELKDEGAILIAKAIEAGHDQLNEVDLSTNAIRRAGARLLAQ 462

Query: 335 ----------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
                     L+++GN I DEGI  +     S    L  LD
Sbjct: 463 AVVHKPGFKSLNINGNYISDEGIDEVKDIFKSLPDVLGKLD 503



 Score = 38.9 bits (89), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESL--GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            + ++++     DEG   +A+++  G++Q   EV  + N I  AG +     +      K
Sbjct: 413 LTKLNLAENELKDEGAILIAKAIEAGHDQL-NEVDLSTNAIRRAGARLLAQAVVHKPGFK 471

Query: 222 TLNLSGNPIGDEGVKCLCDIL 242
           +LN++GN I DEG+  + DI 
Sbjct: 472 SLNINGNYISDEGIDEVKDIF 492


>gi|290974964|ref|XP_002670214.1| predicted protein [Naegleria gruberi]
 gi|284083770|gb|EFC37470.1| predicted protein [Naegleria gruberi]
          Length = 383

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 153/308 (49%), Gaps = 51/308 (16%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++   S+D+S    GDEG  F++E     +    +    N I   G+K  + +  
Sbjct: 121 KFITEMKQLKSLDISENRIGDEGAKFISEM----KQLTSLDIGYNRIGVVGVKFINEMKH 176

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELL 270
               L +L++SGN IGDEGVK + ++          QL+S+D       D+GAK+I+E+ 
Sbjct: 177 ----LTSLDISGNGIGDEGVKSISEL---------KQLTSLDFNNNRIGDKGAKSISEMK 223

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
                L +L +NNN I   G    A  + E   ++SL +  N  G  G    AK +   K
Sbjct: 224 H----LTLLSINNNHIGAEG----ARFISEMKQLKSLSIYNNQIGDEG----AKFINEMK 271

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L + GN IG EG+  +     S   +L  L+IG N I  +GA  ++E     K L+
Sbjct: 272 QLTSLDISGNEIGVEGVIPI-----SEMKQLTSLEIGGNQIGDEGAKLISE----MKQLI 322

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +N+Y N IG EGA+ I++     + + ++ +GGN I  +G   I+ + +    +TSLD+
Sbjct: 323 SLNIYNNQIGIEGAKFISEM----KQLKSLYIGGNQIGDEGVKFISEMKQ----LTSLDI 374

Query: 451 AYNPIGAD 458
            YN I  D
Sbjct: 375 GYNEIVKD 382



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 47/280 (16%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE-----GAKAIAELLKNNS 274
           LK+L++S N IGDEG K +          E  QL+S+D+        G K I E+     
Sbjct: 129 LKSLDISENRIGDEGAKFIS---------EMKQLTSLDIGYNRIGVVGVKFINEMKH--- 176

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L+++ N I   G  S++E       + SL  N N  G  GA ++++     K L  
Sbjct: 177 -LTSLDISGNGIGDEGVKSISEL----KQLTSLDFNNNRIGDKGAKSISEM----KHLTL 227

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L ++ N IG EG R +     S   +L  L I NN I  +GA    ++I   K L  +++
Sbjct: 228 LSINNNHIGAEGARFI-----SEMKQLKSLSIYNNQIGDEGA----KFINEMKQLTSLDI 278

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+IG EG   I++     + +T++++GGN I  +GA  I+ + +    + SL++  N 
Sbjct: 279 SGNEIGVEGVIPISEM----KQLTSLEIGGNQIGDEGAKLISEMKQ----LISLNIYNNQ 330

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IG +GAK +SE+ +    + +L +G  QIG  G +F+++M
Sbjct: 331 IGIEGAKFISEMKQ----LKSLYIGGNQIGDEGVKFISEM 366



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 159/332 (47%), Gaps = 79/332 (23%)

Query: 249 ERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           E  QL S+D+      DEGAK I+E+ +    L  L++  N I   G   + E       
Sbjct: 125 EMKQLKSLDISENRIGDEGAKFISEMKQ----LTSLDIGYNRIGVVGVKFINEM----KH 176

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + SL ++GN  G  G  ++++     K L  L  + N IGD+G +++     S    L +
Sbjct: 177 LTSLDISGNGIGDEGVKSISEL----KQLTSLDFNNNRIGDKGAKSI-----SEMKHLTL 227

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L I NN I A+GA  ++E +K  KSL   ++Y N IGDEGA K  + +KQ   +T++D+ 
Sbjct: 228 LSINNNHIGAEGARFISE-MKQLKSL---SIYNNQIGDEGA-KFINEMKQ---LTSLDIS 279

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I  +G   I+ + +    +TSL++  N IG +GAK +SE+ +      +L +   QI
Sbjct: 280 GNEIGVEGVIPISEMKQ----LTSLEIGGNQIGDEGAKLISEMKQLI----SLNIYNNQI 331

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G  GA+F+++M +  +    L +  N + DE                             
Sbjct: 332 GIEGAKFISEMKQLKS----LYIGGNQIGDE----------------------------- 358

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
              G K +++      + LTS+D+ +NEI  D
Sbjct: 359 ---GVKFISEM-----KQLTSLDIGYNEIVKD 382



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 104/224 (46%), Gaps = 49/224 (21%)

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           + + ++D+  N I  +GA  I+ + +    +TSLD+ YN IG  G K ++E+     ++ 
Sbjct: 127 KQLKSLDISENRIGDEGAKFISEMKQ----LTSLDIGYNRIGVVGVKFINEM----KHLT 178

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           +L +    IG  G + ++++      ++ LD   N + D+             +I  +KH
Sbjct: 179 SLDISGNGIGDEGVKSISEL----KQLTSLDFNNNRIGDKGA----------KSISEMKH 224

Query: 535 MLFYSLCINYL--QGAKCLA-----------------QSFKVVNE--ALTSIDLAFNEIR 573
           +   S+  N++  +GA+ ++                 +  K +NE   LTS+D++ NEI 
Sbjct: 225 LTLLSINNNHIGAEGARFISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIG 284

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
            +G   I++  +      +TSL +  N +   G   +++ K L+
Sbjct: 285 VEGVIPISEMKQ------LTSLEIGGNQIGDEGAKLISEMKQLI 322


>gi|299067411|emb|CBJ38610.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
           solanacearum CMR15]
          Length = 620

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 163/350 (46%), Gaps = 73/350 (20%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+D S    G+ G    AE+L  N    E++ A N I   G++A  G    N +L 
Sbjct: 283 KTLTSLDASKNGIGNAG----AEALAKNTVLRELNLAHNMIGTPGVRALAG----NTSLT 334

Query: 222 TLNLSGNPIGDEGV------KCLCDILVDN-----AGVERL----QLSSVDLRDE----- 261
            L+L GN +GD G       + L  + VD+      G + L     L+S+DL        
Sbjct: 335 ELDLGGNRLGDAGALELAGNRSLLSLKVDHNEIGGGGAQALARHATLTSLDLSYNAIGLW 394

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA-- 319
           GA A    L  N+ L VL L+   ID     +LA     N ++  L+LNGN+ G  GA  
Sbjct: 395 GAGA----LGANTTLSVLNLSFCGIDSHSACALAC----NKSLAELYLNGNWIGDYGALE 446

Query: 320 ------------------NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
                             NA A+ L GN++L  L L GN I D+G  AL     +R  +L
Sbjct: 447 LAKNRTLTLLDLSRNGIRNAGAEALGGNQALTSLKLAGNGIDDDGAAAL-----ARHPRL 501

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             LD+  N I A+GA H+A+      +L  ++L  N IG +GAE    AL Q+  + T++
Sbjct: 502 TTLDLSRNRIGAEGARHLAQ----SATLAELDLSQNRIGPDGAE----ALSQSTALITLN 553

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           +  N I   GA    R L D++ +TSLD   N IG DGAK L    +  G
Sbjct: 554 VSHNAIGEAGA----RSLADSASLTSLDARRNGIGEDGAKVLEANTRLTG 599



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 186/408 (45%), Gaps = 82/408 (20%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRV 278
           L +LNL  N IGD+G   L              L+S+D    G   A AE L  N++LR 
Sbjct: 261 LTSLNLYYNEIGDDGAGALA---------ASKTLTSLDASKNGIGNAGAEALAKNTVLRE 311

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +NMI   G  +LA     N+++  L L GN  G  GA  LA    GN+SL  L + 
Sbjct: 312 LNLAHNMIGTPGVRALAG----NTSLTELDLGGNRLGDAGALELA----GNRSLLSLKVD 363

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA--------------------FH 378
            N IG  G +AL     +R   L  LD+  N+I   GA                     H
Sbjct: 364 HNEIGGGGAQAL-----ARHATLTSLDLSYNAIGLWGAGALGANTTLSVLNLSFCGIDSH 418

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A  +   KSL  + L  N IGD GA ++A    +NRT+T +DL  N I + GA A    
Sbjct: 419 SACALACNKSLAELYLNGNWIGDYGALELA----KNRTLTLLDLSRNGIRNAGAEA---- 470

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N  +TSL LA N I  DGA AL+     H  + TL L   +IGA GA  +A     +
Sbjct: 471 LGGNQALTSLKLAGNGIDDDGAAALAR----HPRLTTLDLSRNRIGAEGARHLAQ----S 522

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            T++ LDL  N +      G +G      A+     ++  ++  N +   GA+ LA S  
Sbjct: 523 ATLAELDLSQNRI------GPDG----AEALSQSTALITLNVSHNAIGEAGARSLADS-- 570

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
               +LTS+D   N I +DG    A+ L+AN  +  T  N   NFL +
Sbjct: 571 ---ASLTSLDARRNGIGEDG----AKVLEANTRLTGTEQN--PNFLAE 609



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 204/438 (46%), Gaps = 85/438 (19%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCL-------------CDI-------LVDNAGVERLQLSS 255
           + + LK+LNL+G  IG EG + L             C I       L  +  ++ L LS 
Sbjct: 186 AEMPLKSLNLTGIEIGVEGARTLAASTSLVSLTLIGCGIGDRAAQALAASQSIKSLDLSV 245

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  +GA+A+A      + L  L L  N I   G    A AL  + T+ SL  + N  G
Sbjct: 246 NMIGRDGAQALAA-----APLTSLNLYYNEIGDDG----AGALAASKTLTSLDASKNGIG 296

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ALAK    N  LREL+L  N IG  G+RAL    S     L  LD+G N +   G
Sbjct: 297 NAGAEALAK----NTVLRELNLAHNMIGTPGVRALAGNTS-----LTELDLGGNRLGDAG 347

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +A      +SLL + +  N+IG  GA+    AL ++ T+T++DL  N I   GA A 
Sbjct: 348 ALELA----GNRSLLSLKVDHNEIGGGGAQ----ALARHATLTSLDLSYNAIGLWGAGA- 398

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
              L  N+ ++ L+L++  I +  A AL+     + ++  L L    IG  GA  +A   
Sbjct: 399 ---LGANTTLSVLNLSFCGIDSHSACALA----CNKSLAELYLNGNWIGDYGALELAK-- 449

Query: 496 RYNNTISILDLRANGLRD---EVCSGCNGLSFFH-----------SAIYSLKHMLFYSLC 541
             N T+++LDL  NG+R+   E   G   L+              +A+     +    L 
Sbjct: 450 --NRTLTLLDLSRNGIRNAGAEALGGNQALTSLKLAGNGIDDDGAAALARHPRLTTLDLS 507

Query: 542 INYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            N +  +GA+ LAQS       L  +DL+ N I  DGA A++Q+       A+ +LN+++
Sbjct: 508 RNRIGAEGARHLAQSAT-----LAELDLSQNRIGPDGAEALSQS------TALITLNVSH 556

Query: 600 NFLTKFGQSALTDAKDLV 617
           N + + G  +L D+  L 
Sbjct: 557 NAIGEAGARSLADSASLT 574


>gi|83748568|ref|ZP_00945588.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
 gi|83724776|gb|EAP71934.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
          Length = 629

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 208/461 (45%), Gaps = 82/461 (17%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + +S+ ++G + GD     LA+S    ++   +  + N I   G +A  G       L +
Sbjct: 216 SLTSLSLTGCSIGDRAATALAQS----RSIASLDLSVNMIGPDGARALAGA-----PLVS 266

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGDEG   L      +  ++ L  S+  + D G    A+    N++L  L L 
Sbjct: 267 LNLHNNGIGDEGALALAT----SGTLKSLNASNNGIGDAGVLGFAD----NTVLTQLNLA 318

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            NMI  +G    A AL  N+++  L L+ N  G  GA  LA    G++SL  L++  N I
Sbjct: 319 GNMIGPAG----ARALRRNTSLTELDLSTNRLGDAGAQVLA----GSRSLTSLNVRNNEI 370

Query: 343 GDEGIRALMSGLSSRK-------------------GKLAVLDIGNNSISAKGAFHVAEYI 383
           GD+G  AL    + +                      L+ LD+   +I   GA  +A   
Sbjct: 371 GDDGTEALARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNT 430

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
               S+  ++L  N IGD GA  IA      RT+T +DL  NNIH  G    A+VL  N 
Sbjct: 431 ----SVASLHLGSNRIGDSGARAIATI----RTLTLLDLSRNNIHDAG----AQVLAGND 478

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + SL+L  N IG DG  AL++    H  + +L L   +IG +GA+ +A     + T++ 
Sbjct: 479 SLMSLNLDDNEIGDDGTAALAQ----HPRLTSLNLASNRIGPTGAQHLA----KSATLTE 530

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
           LDL  N +  E   G   LS            +  +L ++     +  A++F   + +LT
Sbjct: 531 LDLSENRIGPE---GAEALSL---------STVLTTLNVSGNAIGEAGARAFAEKSTSLT 578

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           S+D   N + + G    A+ L+AN  +  T  N   NFL +
Sbjct: 579 SLDARNNRMGEAG----AKMLEANTRLTGTPQN--PNFLAE 613



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 197/444 (44%), Gaps = 102/444 (22%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T +G+      L +   LK+L+L+G  I  EG + L       A +  L L+   + D  
Sbjct: 176 TGSGVSNAGLALLATRPLKSLSLNGIEIDAEGARLLATC----ASLTSLSLTGCSIGDRA 231

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A A+A+    +  +  L+L+ NMI   G  +LA A L      SL+L+ N  G  GA AL
Sbjct: 232 ATALAQ----SRSIASLDLSVNMIGPDGARALAGAPLV-----SLNLHNNGIGDEGALAL 282

Query: 323 AK--------------------GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           A                     G   N  L +L+L GN IG  G RAL      R   L 
Sbjct: 283 ATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALR-----RNTSLT 337

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            LD+  N +   G    A+ +   +SL  +N+  N+IGD+G E    AL +N T+ +++L
Sbjct: 338 ELDLSTNRLGDAG----AQVLAGSRSLTSLNVRNNEIGDDGTE----ALARNTTLKSLNL 389

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I  +GA A+      N+ ++ LDL    I   GA AL+     + ++ +L LG  +
Sbjct: 390 SYNRIGLQGAGAL----GGNTTLSELDLRACAIDPYGASALAR----NTSVASLHLGSNR 441

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           IG SGA  +A +     T+++LDL  N + D                             
Sbjct: 442 IGDSGARAIATI----RTLTLLDLSRNNIHD----------------------------- 468

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
               GA+ LA      N++L S++L  NEI DDG  A+AQ  +      +TSLNLA+N +
Sbjct: 469 ---AGAQVLAG-----NDSLMSLNLDDNEIGDDGTAALAQHPR------LTSLNLASNRI 514

Query: 603 TKFGQSALTDAKDLV-YEMSEKEV 625
              G   L  +  L   ++SE  +
Sbjct: 515 GPTGAQHLAKSATLTELDLSENRI 538


>gi|357444341|ref|XP_003592448.1| Ran GTPase-activating protein [Medicago truncatula]
 gi|355481496|gb|AES62699.1| Ran GTPase-activating protein [Medicago truncatula]
          Length = 533

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 139/269 (51%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + + +++     ++ L   
Sbjct: 217 LNLSDNALGEKGVRAFGTLLKSQSCLEELYLMNDGISEEAAQAVSELIPSTEKLKVLHFH 276

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA+AIAE++K +S L     ++  I   G  +L++AL + + +R L L  N  
Sbjct: 277 NNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKLDLRDNML 336

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  +L+K L  N  LRE++L   ++ DEG  A+ + L +   +L VL++  N+I+  
Sbjct: 337 GVEGGVSLSKALAKNAELREIYLSFLNLEDEGAIAIANALKASAPRLEVLEMSGNNITVD 396

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  +   + L  +NL  N++ DEGA +I+ AL+    +  IDL  N I   GA  
Sbjct: 397 AAPAIANCLAAKQFLAKLNLSENELKDEGAIQISKALEGLSQLKEIDLSCNRITRDGAQQ 456

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKAL 463
           +A  +        LD+  N I  +G K L
Sbjct: 457 LALTVLQKVDFERLDIDGNFISDEGIKEL 485



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 152/295 (51%), Gaps = 4/295 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    G++G+      L      EE+    +GI+    +A   ++ S   LK L+  
Sbjct: 217 LNLSDNALGEKGVRAFGTLLKSQSCLEELYLMNDGISEEAAQAVSELIPSTEKLKVLHFH 276

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GDEG + + +++  ++ +E  + SS  + DEG  A+++ L + + LR L+L +NM+
Sbjct: 277 NNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKLDLRDNML 336

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHLHGNSIGDE 345
              G  SL++AL +N+ +R ++L+       GA A+A  L+ +   L  L + GN+I  +
Sbjct: 337 GVEGGVSLSKALAKNAELREIYLSFLNLEDEGAIAIANALKASAPRLEVLEMSGNNITVD 396

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              A+ + L++++  LA L++  N +  +GA  +++ ++    L  I+L  N I  +GA+
Sbjct: 397 AAPAIANCLAAKQF-LAKLNLSENELKDEGAIQISKALEGLSQLKEIDLSCNRITRDGAQ 455

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGADG 459
           ++A  + Q      +D+ GN I  +G   +  +  K    +  LD   +P G DG
Sbjct: 456 QLALTVLQKVDFERLDIDGNFISDEGIKELMVIFEKSPDKLGPLD-ENDPDGKDG 509



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 144/284 (50%), Gaps = 14/284 (4%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LEG+  L+ L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V+E I +
Sbjct: 209 LEGS-VLKYLNLSDNALGEKGVRAFGTLLKSQSC-LEELYLMNDGISEEAAQAVSELIPS 266

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            + L  ++ + N  GDEGA  IA+ +K++  +         I  +G  A++  L D + +
Sbjct: 267 TEKLKVLHFHNNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHL 326

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISIL 504
             LDL  N +G +G  +LS+ L  +  +  + L +  +   GA  +A+ L+ +   + +L
Sbjct: 327 RKLDLRDNMLGVEGGVSLSKALAKNAELREIYLSFLNLEDEGAIAIANALKASAPRLEVL 386

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEAL 562
           ++  N +        +      + + + + +   +L  N L  +GA  ++++ + +++ L
Sbjct: 387 EMSGNNIT------VDAAPAIANCLAAKQFLAKLNLSENELKDEGAIQISKALEGLSQ-L 439

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
             IDL+ N I  DGA  +  AL   + V    L++  NF++  G
Sbjct: 440 KEIDLSCNRITRDGAQQL--ALTVLQKVDFERLDIDGNFISDEG 481


>gi|443700630|gb|ELT99510.1| hypothetical protein CAPTEDRAFT_172553 [Capitella teleta]
          Length = 509

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 60/323 (18%)

Query: 312 NYG-GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N+G G LGA A++K LE N  +  L L GNSI                            
Sbjct: 102 NHGLGPLGAKAISKPLESNTHIERLDLEGNSI---------------------------- 133

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
             A GA H++  ++    +  + L  N +G  GA+ + + L  N TI+ +DL GN++   
Sbjct: 134 -EADGAIHISRVLRENLYVNHLVLSENKLGTRGAQAVCEMLHDNHTISNLDLSGNDLKDT 192

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                  +L +NS + +L L +N    D A+ L E L  + N+  L L W  +   GA++
Sbjct: 193 DGEHFYNLLTNNSTLNTLHLKHNKFEVDAARWLKEALTQNENLKILDLSWNHLRMRGAQY 252

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL----- 545
           +ADM+  N  +  L+L  NG+ +E                ++ H L ++ C+  L     
Sbjct: 253 IADMVMENYGLKYLNLSMNGMGEE-------------GARAIGHALSHNQCLQELNISAN 299

Query: 546 ----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
               +GA  +++   +VNE L ++ +  N I  +G++ +  A+  N +  +  L+L N  
Sbjct: 300 RITMEGALQISRGL-LVNEVLETLRIGTNPIGTEGSYHVIAAVDKNSNSCIQVLDLTNII 358

Query: 602 LTKFGQSALTDAKDLVYEMSEKE 624
           +++       D +DLV +M +++
Sbjct: 359 VSQ-------DFEDLVDKMHDED 374



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            Q +I  ++  +  + +G  G K +   L  N  +ERL L    +  +GA  I+ +L+ N
Sbjct: 89  FQRHIQDRSFIMRNHGLGPLGAKAISKPLESNTHIERLDLEGNSIEADGAIHISRVLREN 148

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L L+ N +   G  ++ E L +N TI +L L+GN             L  N +L 
Sbjct: 149 LYVNHLVLSENKLGTRGAQAVCEMLHDNHTISNLDLSGNDLKDTDGEHFYNLLTNNSTLN 208

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            LHL  N    +  R L   L+  +  L +LD+  N +  +GA ++A+ +     L ++N
Sbjct: 209 TLHLKHNKFEVDAARWLKEALTQNEN-LKILDLSWNHLRMRGAQYIADMVMENYGLKYLN 267

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L MN +G+EGA  I  AL  N+ +  +++  N I  +GA  I+R L  N V+ +L +  N
Sbjct: 268 LSMNGMGEEGARAIGHALSHNQCLQELNISANRITMEGALQISRGLLVNEVLETLRIGTN 327

Query: 454 PIGADGA 460
           PIG +G+
Sbjct: 328 PIGTEGS 334



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 129/268 (48%), Gaps = 4/268 (1%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F + ++  S + M     G  G   +++ L  N   E +    N I A G      VL+ 
Sbjct: 89  FQRHIQDRSFI-MRNHGLGPLGAKAISKPLESNTHIERLDLEGNSIEADGAIHISRVLRE 147

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+ +  L LS N +G  G + +C++L DN  +  L LS  DL+D   +    LL NNS L
Sbjct: 148 NLYVNHLVLSENKLGTRGAQAVCEMLHDNHTISNLDLSGNDLKDTDGEHFYNLLTNNSTL 207

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L +N  +      L EAL +N  ++ L L+ N+    GA  +A  +  N  L+ L+
Sbjct: 208 NTLHLKHNKFEVDAARWLKEALTQNENLKILDLSWNHLRMRGAQYIADMVMENYGLKYLN 267

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N +G+EG RA+   LS  +  L  L+I  N I+ +GA  ++  +   + L  + +  
Sbjct: 268 LSMNGMGEEGARAIGHALSHNQC-LQELNISANRITMEGALQISRGLLVNEVLETLRIGT 326

Query: 397 NDIGDEGAEKIADALKQNRT--ITTIDL 422
           N IG EG+  +  A+ +N    I  +DL
Sbjct: 327 NPIGTEGSYHVIAAVDKNSNSCIQVLDL 354



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 82/185 (44%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL     Q + E   +    S++D+SG +  D         L  N T   +    N    
Sbjct: 160 KLGTRGAQAVCEMLHDNHTISNLDLSGNDLKDTDGEHFYNLLTNNSTLNTLHLKHNKFEV 219

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              +     L  N  LK L+LS N +   G + + D++++N G++ L LS   + +EGA+
Sbjct: 220 DAARWLKEALTQNENLKILDLSWNHLRMRGAQYIADMVMENYGLKYLNLSMNGMGEEGAR 279

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AI   L +N  L+ L ++ N I   G   ++  LL N  + +L +  N  G  G+  +  
Sbjct: 280 AIGHALSHNQCLQELNISANRITMEGALQISRGLLVNEVLETLRIGTNPIGTEGSYHVIA 339

Query: 325 GLEGN 329
            ++ N
Sbjct: 340 AVDKN 344


>gi|207743293|ref|YP_002259685.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
 gi|206594690|emb|CAQ61617.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
          Length = 625

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 208/461 (45%), Gaps = 82/461 (17%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + +S+ ++G + GD     LA+S    ++   +  + N I   G +A  G       L +
Sbjct: 212 SLTSLSLTGCSIGDRAATALAQS----RSIASLDLSVNMIGPDGARALAGA-----PLVS 262

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGDEG   L      +  ++ L  S+  + D G    A+    N++L  L L 
Sbjct: 263 LNLHNNGIGDEGALALAT----SGTLKSLNASNNGIGDAGVLGFAD----NTVLTQLNLA 314

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            NMI  +G    A AL  N+++  L L+ N  G  GA  LA    G++SL  L++  N I
Sbjct: 315 GNMIGPAG----ARALRRNTSLTELDLSTNRLGDAGAQVLA----GSRSLTSLNVRNNEI 366

Query: 343 GDEGIRALMSGLSSRK-------------------GKLAVLDIGNNSISAKGAFHVAEYI 383
           GD+G  AL    + +                      L+ LD+   +I   GA  +A   
Sbjct: 367 GDDGTEALARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNT 426

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
               S+  ++L  N IGD GA  IA      RT+T +DL  NNIH  G    A+VL  N 
Sbjct: 427 ----SVASLHLGSNRIGDSGARAIATI----RTLTLLDLSRNNIHDAG----AQVLAGND 474

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + SL+L  N IG DG  AL++    H  + +L L   +IG +GA+ +A     + T++ 
Sbjct: 475 SLMSLNLDDNEIGDDGTAALAQ----HPRLTSLNLASNRIGPTGAQHLA----KSATLTE 526

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
           LDL  N +  E   G   LS            +  +L ++     +  A++F   + +LT
Sbjct: 527 LDLSENRIGPE---GAEALSL---------STVLTTLNVSGNAIGEAGARAFAEKSTSLT 574

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           S+D   N + + G    A+ L+AN  +  T  N   NFL +
Sbjct: 575 SLDARNNRMGEAG----AKMLEANTRLTGTPQN--PNFLAE 609



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 197/444 (44%), Gaps = 102/444 (22%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T +G+      L +   LK+L+L+G  I  EG + L       A +  L L+   + D  
Sbjct: 172 TGSGVSNAGLALLATRPLKSLSLNGIEIDAEGARLLATC----ASLTSLSLTGCSIGDRA 227

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A A+A+    +  +  L+L+ NMI   G  +LA A L      SL+L+ N  G  GA AL
Sbjct: 228 ATALAQ----SRSIASLDLSVNMIGPDGARALAGAPLV-----SLNLHNNGIGDEGALAL 278

Query: 323 AK--------------------GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           A                     G   N  L +L+L GN IG  G RAL      R   L 
Sbjct: 279 ATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALR-----RNTSLT 333

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            LD+  N +   G    A+ +   +SL  +N+  N+IGD+G E    AL +N T+ +++L
Sbjct: 334 ELDLSTNRLGDAG----AQVLAGSRSLTSLNVRNNEIGDDGTE----ALARNTTLKSLNL 385

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I  +GA A+      N+ ++ LDL    I   GA AL+     + ++ +L LG  +
Sbjct: 386 SYNRIGLQGAGAL----GGNTTLSELDLRACAIDPYGASALAR----NTSVASLHLGSNR 437

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           IG SGA  +A +     T+++LDL  N + D                             
Sbjct: 438 IGDSGARAIATI----RTLTLLDLSRNNIHD----------------------------- 464

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
               GA+ LA      N++L S++L  NEI DDG  A+AQ  +      +TSLNLA+N +
Sbjct: 465 ---AGAQVLAG-----NDSLMSLNLDDNEIGDDGTAALAQHPR------LTSLNLASNRI 510

Query: 603 TKFGQSALTDAKDLV-YEMSEKEV 625
              G   L  +  L   ++SE  +
Sbjct: 511 GPTGAQHLAKSATLTELDLSENRI 534


>gi|428180756|gb|EKX49622.1| hypothetical protein GUITHDRAFT_58670, partial [Guillardia theta
           CCMP2712]
          Length = 366

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 23/361 (6%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           E  K + E LK+NS +  L+L+ N I   G   L E    N  I  ++L+ N     G +
Sbjct: 5   EEMKHLVEGLKSNSSIHTLDLSMNRIGVEGSQYLRELFQHNLAIADVNLSANELRDKGIS 64

Query: 321 ALAKGLEGNKS------LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            +A+G+  NK+      +R L L+ NS   +G RAL   L+  +  + +LD+  N I   
Sbjct: 65  NVAEGILANKTATRTRPVRRLVLYDNSFSTDGARALSMCLAHAQVSITLLDLSRNPIGCS 124

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   VA+ + +   L+ + +    IG EG  ++A+A+++  ++ ++ L    +   GA  
Sbjct: 125 GVSFVADAVFHGCPLVTLLVSNCKIGSEGMIRMAEAIEKTTSLLSLKLQRCPLDPLGAQH 184

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVL--------KFHGNINTLKLGWCQIGAS 486
           +AR+L+ N  +  LDL+ +PI   G   ++  +        + +  + +L +  CQ+ A 
Sbjct: 185 LARMLERNPALLGLDLSGSPILGAGMAEIAASMGGDADTRRERNTRLTSLSVRSCQLHAG 244

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ 546
           GA  +A ML  NN +  LDL  N +      G  G     +A+     +    L  N ++
Sbjct: 245 GAAHIARMLHSNNHLRRLDLGDNKI------GTRGALELSAALQQNFALTELQLGKNEIE 298

Query: 547 GAKCLAQSFKV-VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
              CL     + VN +L  +DL+ N I D GA A+   L ANE  A++ L +  N LT  
Sbjct: 299 DEGCLGLGRCLSVNLSLRKLDLSDNRIGDGGARALCLGLLANE--AMSELRVEGNVLTSV 356

Query: 606 G 606
           G
Sbjct: 357 G 357



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 165/360 (45%), Gaps = 24/360 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           ++ RE  + L E  K   +  ++D+S    G EG  +L E   +N    +V+ +AN +  
Sbjct: 1   QIGREEMKHLVEGLKSNSSIHTLDLSMNRIGVEGSQYLRELFQHNLAIADVNLSANELRD 60

Query: 205 AGIK-AFDGVLQSNIALKT-----LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVD 257
            GI    +G+L +  A +T     L L  N    +G + L   L      +  L LS   
Sbjct: 61  KGISNVAEGILANKTATRTRPVRRLVLYDNSFSTDGARALSMCLAHAQVSITLLDLSRNP 120

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           +   G   +A+ + +   L  L ++N  I   G   +AEA+ + +++ SL L       L
Sbjct: 121 IGCSGVSFVADAVFHGCPLVTLLVSNCKIGSEGMIRMAEAIEKTTSLLSLKLQRCPLDPL 180

Query: 318 GANALAKGLEGNKSLRELHLHGNSI---GDEGIRALMSG----LSSRKGKLAVLDIGNNS 370
           GA  LA+ LE N +L  L L G+ I   G   I A M G       R  +L  L + +  
Sbjct: 181 GAQHLARMLERNPALLGLDLSGSPILGAGMAEIAASMGGDADTRRERNTRLTSLSVRSCQ 240

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           + A GA H+A  + +   L  ++L  N IG  GA +++ AL+QN  +T + LG N I  +
Sbjct: 241 LHAGGAAHIARMLHSNNHLRRLDLGDNKIGTRGALELSAALQQNFALTELQLGKNEIEDE 300

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALS---------EVLKFHGNINTLKLGWC 481
           G   + R L  N  +  LDL+ N IG  GA+AL            L+  GN+ T  +G C
Sbjct: 301 GCLGLGRCLSVNLSLRKLDLSDNRIGDGGARALCLGLLANEAMSELRVEGNVLT-SVGVC 359



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 158/355 (44%), Gaps = 44/355 (12%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G E +  L E L  N +   +  + N I   G +    + Q N+A+  +NLS N + D+
Sbjct: 2   IGREEMKHLVEGLKSNSSIHTLDLSMNRIGVEGSQYLRELFQHNLAIADVNLSANELRDK 61

Query: 234 GVKCLCDILVDNAG------VERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMI 286
           G+  + + ++ N        V RL L       +GA+A++  L +  + + +L+L+ N I
Sbjct: 62  GISNVAEGILANKTATRTRPVRRLVLYDNSFSTDGARALSMCLAHAQVSITLLDLSRNPI 121

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             SG + +A+A+     + +L ++    G+ G   +A+ +E   SL  L L         
Sbjct: 122 GCSGVSFVADAVFHGCPLVTLLVSNCKIGSEGMIRMAEAIEKTTSLLSLKLQ-------- 173

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
                                   +   GA H+A  ++   +LL ++L  + I   G  +
Sbjct: 174 ---------------------RCPLDPLGAQHLARMLERNPALLGLDLSGSPILGAGMAE 212

Query: 407 IADAL--------KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IA ++        ++N  +T++ +    +H+ GA+ IAR+L  N+ +  LDL  N IG  
Sbjct: 213 IAASMGGDADTRRERNTRLTSLSVRSCQLHAGGAAHIARMLHSNNHLRRLDLGDNKIGTR 272

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           GA  LS  L+ +  +  L+LG  +I   G   +   L  N ++  LDL  N + D
Sbjct: 273 GALELSAALQQNFALTELQLGKNEIEDEGCLGLGRCLSVNLSLRKLDLSDNRIGD 327



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG +  K L E LK + +I+TL L   +IG  G++++ ++ ++N  I+ ++L AN LRD+
Sbjct: 2   IGREEMKHLVEGLKSNSSIHTLDLSMNRIGVEGSQYLRELFQHNLAIADVNLSANELRDK 61

Query: 515 -VCSGCNGLSFFHSAIYS--LKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            + +   G+    +A  +  ++ ++ Y    +   GA+ L+        ++T +DL+ N 
Sbjct: 62  GISNVAEGILANKTATRTRPVRRLVLYDNSFST-DGARALSMCLAHAQVSITLLDLSRNP 120

Query: 572 IRDDGAFAIAQAL 584
           I   G   +A A+
Sbjct: 121 IGCSGVSFVADAV 133


>gi|255552321|ref|XP_002517205.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223543840|gb|EEF45368.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 549

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 140/270 (51%), Gaps = 1/270 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     +  L   +    
Sbjct: 234 NALGEKGVRAFGALLRSQSCLEELYLMNDGISEEAARAVCELIPSTEKLRILHFHNNMTG 293

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA AIAE+LK +++L     ++  I   G  +L+EAL   S ++ L L  N  G    
Sbjct: 294 DPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSEALETCSHLKKLDLRDNVFGVEAG 353

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L  +  L E++L   ++ DEG  A+ + L      L VLD+  N I+A+ A  V
Sbjct: 354 VALSKVLPKHAGLTEVYLSYLNLEDEGAIAIANALKESAPALEVLDMAGNDITAEAAPVV 413

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
           +  ++  ++L+ +NL  N++ DEGA +I+ AL++    +  +D+  N+I   GA  +A+V
Sbjct: 414 SACVELKQNLIKLNLAENELKDEGAIQISKALEEGHVQLKEVDMSTNSIGRVGARVLAQV 473

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +        L++  N I  +G   + E+ K
Sbjct: 474 MVQKPEFKLLNINENCISDEGIDEVKEIFK 503



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 19/293 (6%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+  L+ L L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 215 NIFSAALEGS-ILKSLDLSNNALGEKGVRAFGALLRSQSC-LEELYLMNDGISEEAARAV 272

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I + + L  ++ + N  GD GA  IA+ LK++  +         I ++G  A++  L
Sbjct: 273 CELIPSTEKLRILHFHNNMTGDPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSEAL 332

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
           +  S +  LDL  N  G +   ALS+VL  H  +  + L +  +   GA  +A+ L+ + 
Sbjct: 333 ETCSHLKKLDLRDNVFGVEAGVALSKVLPKHAGLTEVYLSYLNLEDEGAIAIANALKESA 392

Query: 499 NTISILDLRANGLRDE---VCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQ 553
             + +LD+  N +  E   V S C  L          ++++  +L  N L  +GA  +++
Sbjct: 393 PALEVLDMAGNDITAEAAPVVSACVELK---------QNLIKLNLAENELKDEGAIQISK 443

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           + +  +  L  +D++ N I   GA  +AQ +    +  +  LN+  N ++  G
Sbjct: 444 ALEEGHVQLKEVDMSTNSIGRVGARVLAQVMVQKPEFKL--LNINENCISDEG 494



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 136/307 (44%), Gaps = 32/307 (10%)

Query: 139 LSGF-TGKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F+  L      S+D+S    G++G+      L      EE+
Sbjct: 198 LSDFIAGRPEEEALDVMNIFSAALEGSILKSLDLSNNALGEKGVRAFGALLRSQSCLEEL 257

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+    +A   ++ S   L+ L+   N  GD G   + ++L  +A +E  + SS
Sbjct: 258 YLMNDGISEEAARAVCELIPSTEKLRILHFHNNMTGDPGALAIAEVLKRSALLEDFRCSS 317

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNM----------------------------ID 287
             +  EG  A++E L+  S L+ L+L +N+                            ++
Sbjct: 318 TRIGAEGGIALSEALETCSHLKKLDLRDNVFGVEAGVALSKVLPKHAGLTEVYLSYLNLE 377

Query: 288 YSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             G  ++A AL E++  +  L + GN   A  A  ++  +E  ++L +L+L  N + DEG
Sbjct: 378 DEGAIAIANALKESAPALEVLDMAGNDITAEAAPVVSACVELKQNLIKLNLAENELKDEG 437

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
              +   L     +L  +D+  NSI   GA  +A+ +        +N+  N I DEG ++
Sbjct: 438 AIQISKALEEGHVQLKEVDMSTNSIGRVGARVLAQVMVQKPEFKLLNINENCISDEGIDE 497

Query: 407 IADALKQ 413
           + +  K+
Sbjct: 498 VKEIFKK 504


>gi|417515989|gb|JAA53796.1| NACHT, LRR and PYD domains-containing protein 12-like protein [Sus
            scrofa]
          Length = 1050

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 180/429 (41%), Gaps = 41/429 (9%)

Query: 192  AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVER 250
             +E+      +T++  +    V ++N  L  L    N + D G+K LC+ L   N  ++ 
Sbjct: 618  VKELKLIFCHLTSSYGRDLSLVFETNQYLTDLEFVKNTLEDSGMKLLCEGLKQPNCILQT 677

Query: 251  LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHL 309
            L+L    +      A+A +L  N  L  LE +   ++ S    L E L + N  ++ L L
Sbjct: 678  LRLYRCLIPSASCGALAAVLSTNQWLTELEFSETKLEASALKLLCEGLKDPNCKVQKLKL 737

Query: 310  NGNY---GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
              ++           LA  L  N +L EL L  N +GD G++ L  GL     K+  LD+
Sbjct: 738  CASFLPGSSEAVCKYLASVLICNPNLTELDLSENPLGDTGVKHLCEGLRHSNCKVEKLDL 797

Query: 367  GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGN 425
               S++      ++ +++  ++L  + ++ N +GD G + + + L     TI  + L   
Sbjct: 798  STCSLTDASCVELSSFLQVSQTLKELFVFANALGDTGVQHLCEGLHHPSGTIQNLVLSEC 857

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIG 484
            ++ +    ++A+VL     +T L L  N I   G K L E LK     +  L L  C + 
Sbjct: 858  SLSAACCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLSLWTCHLT 917

Query: 485  ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
                + + D L  N  + +LDL  N L DE                              
Sbjct: 918  GECCQDLCDALYTNEHLRVLDLSDNALGDE------------------------------ 947

Query: 545  LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
              G + L +  K  +  L ++ LA   + D    A+A  LK NE+  +T L+L+ N L  
Sbjct: 948  --GMQVLCEGLKHPSCKLQTLWLAECHLTDACCGALASVLKRNEN--LTLLDLSGNDLKD 1003

Query: 605  FGQSALTDA 613
            FG   L DA
Sbjct: 1004 FGVQMLCDA 1012



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 176  DEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
            D G+  L E L   N   + +      I +A   A   VL +N  L  L  S   +    
Sbjct: 658  DSGMKLLCEGLKQPNCILQTLRLYRCLIPSASCGALAAVLSTNQWLTELEFSETKLEASA 717

Query: 235  VKCLCDILVD-NAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
            +K LC+ L D N  V++L+L +  L    +   K +A +L  N  L  L+L+ N +  +G
Sbjct: 718  LKLLCEGLKDPNCKVQKLKLCASFLPGSSEAVCKYLASVLICNPNLTELDLSENPLGDTG 777

Query: 291  FTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
               L E L   N  +  L L+           L+  L+ +++L+EL +  N++GD G++ 
Sbjct: 778  VKHLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQVSQTLKELFVFANALGDTGVQH 837

Query: 350  LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
            L  GL    G +  L +   S+SA     +A+ + + +SL  + L  N I D G + + +
Sbjct: 838  LCEGLHHPSGTIQNLVLSECSLSAACCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCE 897

Query: 410  ALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             LKQ +  +  + L   ++  +    +   L  N  +  LDL+ N +G +G + L E LK
Sbjct: 898  GLKQPDCQLKDLSLWTCHLTGECCQDLCDALYTNEHLRVLDLSDNALGDEGMQVLCEGLK 957

Query: 469  FHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                 + TL L  C +  +    +A +L+ N  +++LDL  N L+D
Sbjct: 958  HPSCKLQTLWLAECHLTDACCGALASVLKRNENLTLLDLSGNDLKD 1003



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 3/270 (1%)

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLR 259
            G + A  K    VL  N  L  L+LS NP+GD GVK LC+ L   N  VE+L LS+  L 
Sbjct: 744  GSSEAVCKYLASVLICNPNLTELDLSENPLGDTGVKHLCEGLRHSNCKVEKLDLSTCSLT 803

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS-TIRSLHLNGNYGGALG 318
            D     ++  L+ +  L+ L +  N +  +G   L E L   S TI++L L+     A  
Sbjct: 804  DASCVELSSFLQVSQTLKELFVFANALGDTGVQHLCEGLHHPSGTIQNLVLSECSLSAAC 863

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              +LA+ L   +SL  L L  N I D G++ L  GL     +L  L +    ++ +    
Sbjct: 864  CESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLSLWTCHLTGECCQD 923

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
            + + +   + L  ++L  N +GDEG + + + LK     + T+ L   ++      A+A 
Sbjct: 924  LCDALYTNEHLRVLDLSDNALGDEGMQVLCEGLKHPSCKLQTLWLAECHLTDACCGALAS 983

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            VLK N  +T LDL+ N +   G + L + L
Sbjct: 984  VLKRNENLTLLDLSGNDLKDFGVQMLCDAL 1013



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 14/281 (4%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+S    GD G+  L E L + N   E++  +   +T A        LQ +  LK 
Sbjct: 763  LTELDLSENPLGDTGVKHLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQVSQTLKE 822

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L +  N +GD GV+ LC+ L   +G ++ L LS   L     +++A++L +   L  L L
Sbjct: 823  LFVFANALGDTGVQHLCEGLHHPSGTIQNLVLSECSLSAACCESLAQVLSSTRSLTRLLL 882

Query: 282  NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
             NN I+  G   L E L      L++ ++ + HL G          L   L  N+ LR L
Sbjct: 883  INNKIEDLGLKLLCEGLKQPDCQLKDLSLWTCHLTGE-----CCQDLCDALYTNEHLRVL 937

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  N++GDEG++ L  GL     KL  L +    ++      +A  +K  ++L  ++L 
Sbjct: 938  DLSDNALGDEGMQVLCEGLKHPSCKLQTLWLAECHLTDACCGALASVLKRNENLTLLDLS 997

Query: 396  MNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
             ND+ D G + + DAL   +  + T  +  +++H +    I
Sbjct: 998  GNDLKDFGVQMLCDALIDPKCRLQTFYIDTDHLHEETFRKI 1038



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 13/228 (5%)

Query: 147  FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAA 205
            F +  QTL    KEL  F++        GD G+  L E L +   T + +  +   ++AA
Sbjct: 813  FLQVSQTL----KELFVFANA------LGDTGVQHLCEGLHHPSGTIQNLVLSECSLSAA 862

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
              ++   VL S  +L  L L  N I D G+K LC+ L   +  ++ L L +  L  E  +
Sbjct: 863  CCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLSLWTCHLTGECCQ 922

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
             + + L  N  LRVL+L++N +   G   L E L   S  +++L L   +       ALA
Sbjct: 923  DLCDALYTNEHLRVLDLSDNALGDEGMQVLCEGLKHPSCKLQTLWLAECHLTDACCGALA 982

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
              L+ N++L  L L GN + D G++ L   L   K +L    I  + +
Sbjct: 983  SVLKRNENLTLLDLSGNDLKDFGVQMLCDALIDPKCRLQTFYIDTDHL 1030


>gi|294661100|ref|YP_003572975.1| hypothetical protein Aasi_1477 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336250|gb|ACP20847.1| hypothetical protein Aasi_1477 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 614

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 214/472 (45%), Gaps = 76/472 (16%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALK 221
             ++ +S  + GD+G   LA+ L G N     V  + N I   G++ F   LQ +N+ + 
Sbjct: 156 IHTLGLSWNHLGDQGAIVLAQHLQGTN--VHTVDISDNQIGDQGLEGFAKHLQETNVHMV 213

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+ S   IGD+G +     L     V  + LS   + D GA+A+A+ L+   +   L+L
Sbjct: 214 VLSRS--EIGDQGAEGFAKHL-QGTRVHVVDLSMNKMGDSGAEALAKHLQGTQV-HTLDL 269

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I   G  +LA+ L + + ++ + L  N     GA ALA+ L+   ++  L+L  N 
Sbjct: 270 SMNKIGDQGAEALAKHL-QGTNLQEIDLRFNQISDRGAIALAQHLQ-KTNIHTLNLKSNK 327

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG +G  AL+  L  +  ++  LD+  N I   G   +A+YIK   S+  INL  N I  
Sbjct: 328 IGAQGAIALVQHL--KDARIHTLDLCENKIKDAGVIALAQYIKGT-SVHTINLSKNKISV 384

Query: 402 EGAEKIADALK-----------------------QNRTITTIDLGGNNIHSKGASAIARV 438
            GA ++A  L+                       Q   + T++L GNNI  +G  A+ + 
Sbjct: 385 LGAMELAKHLQETNVHTLNLGYNLIRAGQLVKHLQGTRVHTLNLNGNNIDGQGVIALTQY 444

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+  +V   L L  N +GA+GA  L + L+   N+  L LG  +IG  GA  +A +L+  
Sbjct: 445 LEGTNV-QELCLGDNQMGAEGAIRLCKYLQS-TNLEKLGLGSNEIGNVGAIELAKLLQDT 502

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
           N +  LDL  N + D    G                       + +LQG K         
Sbjct: 503 N-VHTLDLSMNEIDDVGAIGI----------------------VQHLQGTK--------- 530

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
              +  + L+FNEI  +GA  IAQ L+  +   V  L+L +N + + G   L
Sbjct: 531 ---VKELRLSFNEIGTEGAIGIAQHLQGTK---VQELDLGHNRIDEEGAMQL 576



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 158/338 (46%), Gaps = 37/338 (10%)

Query: 157 FAKELRA--FSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+     ++D+S    GD+G   LA+ L G N   +E+    N I+  G  A    
Sbjct: 255 LAKHLQGTQVHTLDLSMNKIGDQGAEALAKHLQGTN--LQEIDLRFNQISDRGAIALAQH 312

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           LQ    + TLNL  N IG +G   L   L D A +  L L    ++D G  A+A+ +K  
Sbjct: 313 LQKT-NIHTLNLKSNKIGAQGAIALVQHLKD-ARIHTLDLCENKIKDAGVIALAQYIKGT 370

Query: 274 SILRVLELNNNMIDYSGFTSLAEAL-----------------------LENSTIRSLHLN 310
           S+   + L+ N I   G   LA+ L                       L+ + + +L+LN
Sbjct: 371 SV-HTINLSKNKISVLGAMELAKHLQETNVHTLNLGYNLIRAGQLVKHLQGTRVHTLNLN 429

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           GN     G  AL + LEG  +++EL L  N +G EG   L   L S    L  L +G+N 
Sbjct: 430 GNNIDGQGVIALTQYLEGT-NVQELCLGDNQMGAEGAIRLCKYLQSTN--LEKLGLGSNE 486

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  +A+ +++  ++  ++L MN+I D GA  I   L Q   +  + L  N I ++
Sbjct: 487 IGNVGAIELAKLLQDT-NVHTLDLSMNEIDDVGAIGIVQHL-QGTKVKELRLSFNEIGTE 544

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           GA  IA+ L+   V   LDL +N I  +GA  L + L+
Sbjct: 545 GAIGIAQHLQGTKV-QELDLGHNRIDEEGAMQLGKYLQ 581



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 176/362 (48%), Gaps = 22/362 (6%)

Query: 157 FAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           FAK L+      VD+S    GD G   LA+ L   Q    +  + N I   G +A    L
Sbjct: 228 FAKHLQGTRVHVVDLSMNKMGDSGAEALAKHLQGTQ-VHTLDLSMNKIGDQGAEALAKHL 286

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           Q    L+ ++L  N I D G   L   L     +  L L S  +  +GA A+ + LK+  
Sbjct: 287 QGT-NLQEIDLRFNQISDRGAIALAQHL-QKTNIHTLNLKSNKIGAQGAIALVQHLKDAR 344

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           I   L+L  N I  +G  +LA+  ++ +++ +++L+ N    LGA  LAK       L+E
Sbjct: 345 I-HTLDLCENKIKDAGVIALAQ-YIKGTSVHTINLSKNKISVLGAMELAK------HLQE 396

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCKSLLWI 392
            ++H  ++G   IRA       +  ++  L++  N+I  +G   + +Y++  N + L   
Sbjct: 397 TNVHTLNLGYNLIRAGQLVKHLQGTRVHTLNLNGNNIDGQGVIALTQYLEGTNVQELC-- 454

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N +G EGA ++   L Q+  +  + LG N I + GA  +A++L+D +V T LDL+ 
Sbjct: 455 -LGDNQMGAEGAIRLCKYL-QSTNLEKLGLGSNEIGNVGAIELAKLLQDTNVHT-LDLSM 511

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   GA  + + L+    +  L+L + +IG  GA  +A  L+    +  LDL  N + 
Sbjct: 512 NEIDDVGAIGIVQHLQG-TKVKELRLSFNEIGTEGAIGIAQHLQ-GTKVQELDLGHNRID 569

Query: 513 DE 514
           +E
Sbjct: 570 EE 571



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 55/263 (20%)

Query: 377 FHVAEYIKNCKSLLW----------INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           +H+  +++N     W          + L  N +GD+GA  +A  L Q   + T+D+  N 
Sbjct: 134 YHLMGHVRNLAQSWWPYLQGNNIHTLGLSWNHLGDQGAIVLAQHL-QGTNVHTVDISDNQ 192

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I  +G    A+ L++ +V   + L+ + IG  GA+  ++ L+    ++ + L   ++G S
Sbjct: 193 IGDQGLEGFAKHLQETNVHMVV-LSRSEIGDQGAEGFAKHLQG-TRVHVVDLSMNKMGDS 250

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ 546
           GAE +A  L+    +  LDL  N + D                                Q
Sbjct: 251 GAEALAKHLQ-GTQVHTLDLSMNKIGD--------------------------------Q 277

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           GA+ LA+  +  N  L  IDL FN+I D GA A+AQ L+      + +LNL +N +   G
Sbjct: 278 GAEALAKHLQGTN--LQEIDLRFNQISDRGAIALAQHLQKTN---IHTLNLKSNKIGAQG 332

Query: 607 QSALT----DAKDLVYEMSEKEV 625
             AL     DA+    ++ E ++
Sbjct: 333 AIALVQHLKDARIHTLDLCENKI 355


>gi|51850103|dbj|BAD42392.1| leucine-rich repeat protein [Ralstonia solanacearum]
          Length = 621

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 217/485 (44%), Gaps = 109/485 (22%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G   G EG    A +L  +++   +S    GI     +A    L ++ ++++L
Sbjct: 191 LKSLNLNGIEIGVEG----ARTLATSKSLVSLSLIGCGIGDRAAQA----LAASRSIRSL 242

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IG +G + L D     A +  L L S ++ D+GA+A+A     +  L  LEL  
Sbjct: 243 DLSVNMIGCDGAQALAD-----APLVSLNLYSNEIGDDGARALA----TSQTLTSLELRR 293

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G    A A   N+ +R L+L  N     GA  LA    GN SL EL L GN +G
Sbjct: 294 NGIGNAG----AGAFANNTVLRKLNLANNMIDKRGARVLA----GNTSLTELDLGGNRLG 345

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY--------------------- 382
           D+G RAL    S     L  L + +N IS +G   +A++                     
Sbjct: 346 DKGARALAGNRS-----LLSLKVDHNEISDEGVQALAQHATLRSLDLSFNFVGLQGAGAL 400

Query: 383 -----------------------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
                                  +   KSL  + L  N IGD+GA     AL +N T+T 
Sbjct: 401 GGNTRLSELNLSLCGINSYSASALARNKSLASLYLNGNRIGDDGAR----ALAKNSTLTL 456

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL  NNI + GA A    L  N  + SL LA N I  DGA AL+     H  + TL L 
Sbjct: 457 LDLSRNNIQNAGAEA----LGGNQALISLKLAGNGIDDDGAAALAR----HPRLTTLDLS 508

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
             +IG+ GA  +A     + T++ LDL  N +  E   G   LS   S + +   ++  +
Sbjct: 509 QNRIGSEGARHLA----QSATLAELDLSENRIGPE---GAKALSL--STVLTTLKVIDNA 559

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           +  +   GA+ LA S      +LTS+D   N I + G    AQ L+AN  +  T  N   
Sbjct: 560 IGED---GARALADS-----TSLTSLDARRNGIGEAG----AQVLEANTRITGTPQN--P 605

Query: 600 NFLTK 604
           NFL +
Sbjct: 606 NFLAE 610



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 177/405 (43%), Gaps = 80/405 (19%)

Query: 255 SVDLRDEGAKAIAEL-LKNNSILRVLELNNNM--IDYSGFTSLAEALLENSTIRSLHLNG 311
           S++LR+     +  L + + ++ R L L   +  + + G  +L        T+  L +  
Sbjct: 113 SLELRNASRAVVTHLTISDPAMFRQLSLYPALKSVRFKGALTLEALKALPPTLEHLEIGR 172

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS------------GLSSRKG 359
             G A+ A  LA        L+ L+L+G  IG EG R L +            G+  R  
Sbjct: 173 CTGSAISAEGLAH--LAAMPLKSLNLNGIEIGVEGARTLATSKSLVSLSLIGCGIGDRAA 230

Query: 360 K-------LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
           +       +  LD+  N I   GA  +A+       L+ +NLY N+IGD+GA     AL 
Sbjct: 231 QALAASRSIRSLDLSVNMIGCDGAQALAD-----APLVSLNLYSNEIGDDGAR----ALA 281

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            ++T+T+++L  N I + GA A A    +N+V+  L+LA N I   GA+    VL  + +
Sbjct: 282 TSQTLTSLELRRNGIGNAGAGAFA----NNTVLRKLNLANNMIDKRGAR----VLAGNTS 333

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           +  L LG  ++G  GA  +A     N ++  L +  N + DE   G   L+  H+ + SL
Sbjct: 334 LTELDLGGNRLGDKGARALAG----NRSLLSLKVDHNEISDE---GVQALA-QHATLRSL 385

Query: 533 K--------------------HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
                                  L  SLC     G    + S    N++L S+ L  N I
Sbjct: 386 DLSFNFVGLQGAGALGGNTRLSELNLSLC-----GINSYSASALARNKSLASLYLNGNRI 440

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
            DDGA A+A+      +  +T L+L+ N +   G  AL   + L+
Sbjct: 441 GDDGARALAK------NSTLTLLDLSRNNIQNAGAEALGGNQALI 479


>gi|444519156|gb|ELV12618.1| Ribonuclease inhibitor [Tupaia chinensis]
          Length = 455

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 193/444 (43%), Gaps = 15/444 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+   +  D       E L   Q    V     G+T A  K     LQ+N  L  L+L
Sbjct: 2   SLDIQCEHLSD---TRWTELLPLIQQYSVVRLDDCGLTEAHCKDICPALQANSGLTELSL 58

Query: 226 SGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV   L  +      V++L L +  L + G   +   L+    LR L LN+N
Sbjct: 59  RTNELGDAGVHLVLQGLQSPTCKVQKLSLQNCCLTEAGCAVLPAALRRMPTLRELHLNDN 118

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E LL+    +  L L      A    ALA  L      +EL +  N IG
Sbjct: 119 PLGDAGLRLLCEGLLDPQCHLEKLQLEYCNLTAASCEALAAVLWAKPGFKELMVSNNGIG 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  ++      +   +    SL  ++L  ND+GD G
Sbjct: 179 EAGVRVLCQGLRDSACQLETLKLENCGVTPANCKDLCGIVAE-ASLQEVDLGSNDLGDAG 237

Query: 404 -AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            AE     L+ +  + T+ L    I ++G   + +VL+    +  L LA N +G +GA+ 
Sbjct: 238 IAELCPGLLRPSSRVKTLWLWECGITAEGCRHLCQVLRAKGSLKELSLAGNELGDEGARL 297

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCN 520
           L E +L     + +L +  C + A+     + +L  N ++  L + +N L D  V   C 
Sbjct: 298 LCESLLDPACQLQSLWVKSCCLTATCCPHFSSVLAQNKSLQELQISSNKLGDAGVQQLCQ 357

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
           GLS   S +     +L+   C     G   LA S  + + +L  +DL+ N + D G   +
Sbjct: 358 GLSQPSSTL----RVLWLGDCEVSDDGCSTLA-SVLLASRSLRELDLSNNCMGDLGIQQL 412

Query: 581 AQALKANEDVAVTSLNLANNFLTK 604
            ++L+     A+  L L + + T+
Sbjct: 413 IESLR-QPGCALEQLVLYDIYWTE 435



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 167/355 (47%), Gaps = 6/355 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + + +     GD G+  + + L       +++S     +T AG       L+    L+ 
Sbjct: 53  LTELSLRTNELGDAGVHLVLQGLQSPTCKVQKLSLQNCCLTEAGCAVLPAALRRMPTLRE 112

Query: 223 LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+L+ NP+GD G++ LC+ L+D    +E+LQL   +L     +A+A +L      + L +
Sbjct: 113 LHLNDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCNLTAASCEALAAVLWAKPGFKELMV 172

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +NN I  +G   L + L +++  + +L L  N G          G+    SL+E+ L  N
Sbjct: 173 SNNGIGEAGVRVLCQGLRDSACQLETLKLE-NCGVTPANCKDLCGIVAEASLQEVDLGSN 231

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD GI  L  GL     ++  L +    I+A+G  H+ + ++   SL  ++L  N++G
Sbjct: 232 DLGDAGIAELCPGLLRPSSRVKTLWLWECGITAEGCRHLCQVLRAKGSLKELSLAGNELG 291

Query: 401 DEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           DEGA  + ++L      + ++ +    + +      + VL  N  +  L ++ N +G  G
Sbjct: 292 DEGARLLCESLLDPACQLQSLWVKSCCLTATCCPHFSSVLAQNKSLQELQISSNKLGDAG 351

Query: 460 AKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            + L + L +    +  L LG C++   G   +A +L  + ++  LDL  N + D
Sbjct: 352 VQQLCQGLSQPSSTLRVLWLGDCEVSDDGCSTLASVLLASRSLRELDLSNNCMGD 406



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 4/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S    G+ G+  L + L  +    E +     G+T A  K   G++ +  +L+ 
Sbjct: 167 FKELMVSNNGIGEAGVRVLCQGLRDSACQLETLKLENCGVTPANCKDLCGIV-AEASLQE 225

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           ++L  N +GD G+  LC  +L  ++ V+ L L    +  EG + + ++L+    L+ L L
Sbjct: 226 VDLGSNDLGDAGIAELCPGLLRPSSRVKTLWLWECGITAEGCRHLCQVLRAKGSLKELSL 285

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N +   G   L E+LL+ +  ++SL +      A      +  L  NKSL+EL +  N
Sbjct: 286 AGNELGDEGARLLCESLLDPACQLQSLWVKSCCLTATCCPHFSSVLAQNKSLQELQISSN 345

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD G++ L  GLS     L VL +G+  +S  G   +A  +   +SL  ++L  N +G
Sbjct: 346 KLGDAGVQQLCQGLSQPSSTLRVLWLGDCEVSDDGCSTLASVLLASRSLRELDLSNNCMG 405

Query: 401 DEGAEKIADALKQ 413
           D G +++ ++L+Q
Sbjct: 406 DLGIQQLIESLRQ 418



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 79/188 (42%), Gaps = 14/188 (7%)

Query: 113 LMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGR 172
           L P   RPS        W  G         T +  R   Q L        +   + ++G 
Sbjct: 241 LCPGLLRPSSRVKTLWLWECG--------ITAEGCRHLCQVLRAKG----SLKELSLAGN 288

Query: 173 NFGDEGLFFLAES-LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
             GDEG   L ES L      + +   +  +TA     F  VL  N +L+ L +S N +G
Sbjct: 289 ELGDEGARLLCESLLDPACQLQSLWVKSCCLTATCCPHFSSVLAQNKSLQELQISSNKLG 348

Query: 232 DEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           D GV+ LC  L   +   R L L   ++ D+G   +A +L  +  LR L+L+NN +   G
Sbjct: 349 DAGVQQLCQGLSQPSSTLRVLWLGDCEVSDDGCSTLASVLLASRSLRELDLSNNCMGDLG 408

Query: 291 FTSLAEAL 298
              L E+L
Sbjct: 409 IQQLIESL 416


>gi|281201035|gb|EFA75249.1| hypothetical protein PPL_11324 [Polysphondylium pallidum PN500]
          Length = 811

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 1/296 (0%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LN+ G   G  G     DIL  N  +  L +SS  L++     IA  ++ N  +  L
Sbjct: 290 LSYLNIGGINFGKIGFPNFLDILARNQDLTILDVSSNHLQESNGDEIANFIRLNESIHTL 349

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            +++N   Y    ++ EAL  N +I +L+++      L    LAK L  N  ++ L +  
Sbjct: 350 NISDNDF-YEATVAIGEALAANKSITNLNISNTKSSNLIGKVLAKTLSTNHCIKILDISH 408

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
             +G  GI     GLSS    L +L I +  +  KGA H+ E + +  +L  + +  N I
Sbjct: 409 TKLGHSGILDFAIGLSSNYITLEILSINDCDLQDKGAIHIGESLLSNVTLTQLYMNSNSI 468

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             EGA+ IA +LK+N T+ T+ LG N I  KG  ++   LK N  +  L +  N I   G
Sbjct: 469 EKEGAKAIAKSLKRNTTLKTLHLGNNQIGVKGIKSLGSALKSNRTLLDLSVKSNSIQEKG 528

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
              L+E LK + ++  L L    +G      +  +L  N  +  +D+  N +  ++
Sbjct: 529 GVNLAEYLKSNNSLEYLNLRGNYLGNKAGNALIKLLGQNQFLINIDVSHNPMDKDL 584



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 161/325 (49%), Gaps = 3/325 (0%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           +    S +++ G NFG  G     + L  NQ    +  ++N +  +        ++ N +
Sbjct: 286 DFTPLSYLNIGGINFGKIGFPNFLDILARNQDLTILDVSSNHLQESNGDEIANFIRLNES 345

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + TLN+S N    E    + + L  N  +  L +S+    +   K +A+ L  N  +++L
Sbjct: 346 IHTLNISDNDFY-EATVAIGEALAANKSITNLNISNTKSSNLIGKVLAKTLSTNHCIKIL 404

Query: 280 ELNNNMIDYSGFTSLAEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++++  + +SG    A  L  N  T+  L +N       GA  + + L  N +L +L+++
Sbjct: 405 DISHTKLGHSGILDFAIGLSSNYITLEILSINDCDLQDKGAIHIGESLLSNVTLTQLYMN 464

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NSI  EG +A+   L  R   L  L +GNN I  KG   +   +K+ ++LL +++  N 
Sbjct: 465 SNSIEKEGAKAIAKSLK-RNTTLKTLHLGNNQIGVKGIKSLGSALKSNRTLLDLSVKSNS 523

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I ++G   +A+ LK N ++  ++L GN + +K  +A+ ++L  N  + ++D+++NP+  D
Sbjct: 524 IQEKGGVNLAEYLKSNNSLEYLNLRGNYLGNKAGNALIKLLGQNQFLINIDVSHNPMDKD 583

Query: 459 GAKALSEVLKFHGNINTLKLGWCQI 483
             + ++   K +  I ++ +   ++
Sbjct: 584 LTQRIASAQKKNQYITSMNISQTEM 608



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 30/249 (12%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSN-IALKTLNLSGNPIGDEGVKCLCD 240
           LA++L  N   + +  +   +  +GI  F   L SN I L+ L+++   + D+G   + +
Sbjct: 391 LAKTLSTNHCIKILDISHTKLGHSGILDFAIGLSSNYITLEILSINDCDLQDKGAIHIGE 450

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L+ N  + +L ++S  +  EGAKAIA+ LK N+ L+ L L NN I   G  SL  AL  
Sbjct: 451 SLLSNVTLTQLYMNSNSIEKEGAKAIAKSLKRNTTLKTLHLGNNQIGVKGIKSLGSALKS 510

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N T+  L +  N     G   LA+ L+ N SL  L+L GN +G++   AL+        K
Sbjct: 511 NRTLLDLSVKSNSIQEKGGVNLAEYLKSNNSLEYLNLRGNYLGNKAGNALI--------K 562

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L    +G N                   L+ I++  N +  +  ++IA A K+N+ IT++
Sbjct: 563 L----LGQNQF-----------------LINIDVSHNPMDKDLTQRIASAQKKNQYITSM 601

Query: 421 DLGGNNIHS 429
           ++    + S
Sbjct: 602 NISQTEMES 610



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 192/437 (43%), Gaps = 38/437 (8%)

Query: 190 QTAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           QT  ++  + N +   G+      V++SN +++ LNLS N +  +    +   L+ N  +
Sbjct: 70  QTIAKLDLSHNYLGPEGLSPIISDVIRSNKSIQWLNLSHNTLDQDENHSILGALLHNQTI 129

Query: 249 ERLQLSS--VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
             L LSS    L  + +K + + ++ +  L  L  + N    +    L++A+  N+T++S
Sbjct: 130 SHLDLSSNEYQLSSDVSKYLCKYIEQSLSLESLNFSKNST-RNPLCGLSKAIATNTTLKS 188

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHL--------HGNSIGDEGIRALMSGLSSRK 358
           + LN        +  L + L  +K++  ++L        + N  G+     +   L+ R 
Sbjct: 189 IDLNSMIISDQDSEQLIESLFNSKTISSINLDQCILSSSNQNCYGN----IISHNLAVRY 244

Query: 359 GKLAVLDIG---NNSISAKGAFHV---------AEYIKNC---KSLLWINLYMNDIGDEG 403
            +L ++D     N +++ +   ++          E    C     L ++N+   + G  G
Sbjct: 245 NELDLIDEASKYNKAMTQEEEMNMLIDQLSNKQEEISMKCLDFTPLSYLNIGGINFGKIG 304

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
                D L +N+ +T +D+  N++       IA  ++ N  I +L+++ N    +   A+
Sbjct: 305 FPNFLDILARNQDLTILDVSSNHLQESNGDEIANFIRLNESIHTLNISDNDF-YEATVAI 363

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
            E L  + +I  L +   +      + +A  L  N+ I ILD+    L     SG    +
Sbjct: 364 GEALAANKSITNLNISNTKSSNLIGKVLAKTLSTNHCIKILDISHTKLGH---SGILDFA 420

Query: 524 FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
              S+ Y    +L  + C    +GA  + +S  + N  LT + +  N I  +GA AIA++
Sbjct: 421 IGLSSNYITLEILSINDCDLQDKGAIHIGESL-LSNVTLTQLYMNSNSIEKEGAKAIAKS 479

Query: 584 LKANEDVAVTSLNLANN 600
           LK N    + +L+L NN
Sbjct: 480 LKRN--TTLKTLHLGNN 494



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 135/312 (43%), Gaps = 54/312 (17%)

Query: 338 HGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISAKG-AFHVAEYIKNCKSLLWINLY 395
           H  SI D +   A  S L      +A LD+ +N +  +G +  +++ I++ KS+ W+NL 
Sbjct: 48  HNKSIKDLDAWIAFGSALKLPTQTIAKLDLSHNYLGPEGLSPIISDVIRSNKSIQWLNLS 107

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIH------------------------SKG 431
            N +  +    I  AL  N+TI+ +DL  N                           SK 
Sbjct: 108 HNTLDQDENHSILGALLHNQTISHLDLSSNEYQLSSDVSKYLCKYIEQSLSLESLNFSKN 167

Query: 432 AS-----AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           ++      +++ +  N+ + S+DL    I    ++ L E L     I+++ L  C + +S
Sbjct: 168 STRNPLCGLSKAIATNTTLKSIDLNSMIISDQDSEQLIESLFNSKTISSINLDQCILSSS 227

Query: 487 GAEFVADMLRYN-----NTISILDL-----RANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
                 +++ +N     N + ++D      +A    +E+    + LS     I S+K + 
Sbjct: 228 NQNCYGNIISHNLAVRYNELDLIDEASKYNKAMTQEEEMNMLIDQLSNKQEEI-SMKCLD 286

Query: 537 FYSLC------INYLQGAKCLAQSFKVV--NEALTSIDLAFNEIRDDGAFAIAQALKANE 588
           F  L       IN+  G         ++  N+ LT +D++ N +++     IA  ++ NE
Sbjct: 287 FTPLSYLNIGGINF--GKIGFPNFLDILARNQDLTILDVSSNHLQESNGDEIANFIRLNE 344

Query: 589 DVAVTSLNLANN 600
             ++ +LN+++N
Sbjct: 345 --SIHTLNISDN 354


>gi|323447070|gb|EGB03030.1| hypothetical protein AURANDRAFT_34584 [Aureococcus anophagefferens]
          Length = 526

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 158/339 (46%), Gaps = 59/339 (17%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYG-G 315
           +R++GA+AIA  LK N  LR LEL  + I  SG  +LA A+    +T+  L L  N   G
Sbjct: 36  IRNDGARAIAFALKGNCTLRRLELQESYISASGVKALALAIKTSPATLEDLALLYNRDMG 95

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA AL   L  + +LR+L+++  +IGDEG + +   L S                   
Sbjct: 96  VEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESN------------------ 137

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
                       SLL INL  N IG EGA  +A AL++N T+ T+ +G N + + GA AI
Sbjct: 138 -----------TSLLEINLGANAIGPEGAVALAAALRENTTLLTLKVGSNALGNDGAKAI 186

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC-QIGASGAEFVADM 494
           A  L  NS + +LDL  N +G  G  AL+  L  +  +  L+LG   QI    A  +A  
Sbjct: 187 AEALGANSALHALDLCSNGVGTVGIDALAAALGTNSTLRKLRLGGADQICPYSAHALAKA 246

Query: 495 LRYNNTISILDLRANGLRDEVCS--GCNGLSFFH--------------SAIYSLKHMLFY 538
           L   + +  LDL         CS  G  GL  +H              +A  SL  +L  
Sbjct: 247 LSAGSALQELDL--------ACSAHGVTGLGGYHGLGDDAAKRFGAGFAAHPSLLRVLRL 298

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFN-EIRDDG 576
                 ++GA+ LA    V   +L S+DL+ N +I D+G
Sbjct: 299 GRNNIGVEGARALAAMLGV--GSLRSLDLSSNHDIGDEG 335



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 197/430 (45%), Gaps = 65/430 (15%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R+ G EG   L   LG +    +++     I   G K     L+SN +L  +NL  N IG
Sbjct: 92  RDMGVEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESNTSLLEINLGANAIG 151

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            EG   L   L +N  +  L++ S  L ++GAKAIAE L  NS L  L+L +N +   G 
Sbjct: 152 PEGAVALAAALRENTTLLTLKVGSNALGNDGAKAIAEALGANSALHALDLCSNGVGTVGI 211

Query: 292 TSLAEALLENSTIRSLHLNG-NYGGALGANALAKGLEGNKSLRELHL----HG------- 339
            +LA AL  NST+R L L G +      A+ALAK L    +L+EL L    HG       
Sbjct: 212 DALAAALGTNSTLRKLRLGGADQICPYSAHALAKALSAGSALQELDLACSAHGVTGLGGY 271

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN-D 398
           + +GD+  +   +G ++    L VL +G N+I  +GA  +A  +    SL  ++L  N D
Sbjct: 272 HGLGDDAAKRFGAGFAAHPSLLRVLRLGRNNIGVEGARALAAML-GVGSLRSLDLSSNHD 330

Query: 399 IGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           IGDEGA  +A AL  N R++  ++L         A+A+A  L  NS +  L L    +  
Sbjct: 331 IGDEGAAALAAALVANPRSLLELNLNCIRSGPAAATALATALGANSALEKLSLNCTKVRD 390

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
           +GAKAL+  L  +  +  L L    IG +GA  +A  L  N T+  L++ +NG RDE   
Sbjct: 391 EGAKALAAALCANSGLQELALEDAFIGRAGAVALAQALASNTTLRELNI-SNG-RDE--- 445

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
                                      ++GA C                   N +RD GA
Sbjct: 446 ---------------------------MEGAAC------------------ANHVRDAGA 460

Query: 578 FAIAQALKAN 587
            A AQAL  N
Sbjct: 461 VAFAQALGEN 470



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 7/214 (3%)

Query: 307 LHLNGNYGGAL---GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           L+ N  YGG +   GA A+A  L+GN +LR L L  + I   G++AL   + +    L  
Sbjct: 26  LYFNPLYGGLIRNDGARAIAFALKGNCTLRRLELQESYISASGVKALALAIKTSPATLED 85

Query: 364 LDI-GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           L +  N  +  +GA  +   +    +L  +N+Y   IGDEGA+ IA AL+ N ++  I+L
Sbjct: 86  LALLYNRDMGVEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESNTSLLEINL 145

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
           G N I  +GA A+A  L++N+ + +L +  N +G DGAKA++E L  +  ++ L L    
Sbjct: 146 GANAIGPEGAVALAAALRENTTLLTLKVGSNALGNDGAKAIAEALGANSALHALDLCSNG 205

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           +G  G + +A  L  N+T+  L L   G  D++C
Sbjct: 206 VGTVGIDALAAALGTNSTLRKLRL---GGADQIC 236



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 197/420 (46%), Gaps = 28/420 (6%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVLELN 282
           L G  I ++G + +   L  N  + RL+L    +   G KA+A  +K +  ++  +  L 
Sbjct: 31  LYGGLIRNDGARAIAFALKGNCTLRRLELQESYISASGVKALALAIKTSPATLEDLALLY 90

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           N  +   G  +L   L  +S +R L++     G  GA  +A  LE N SL E++L  N+I
Sbjct: 91  NRDMGVEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESNTSLLEINLGANAI 150

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G EG  AL + L      L  L +G+N++   GA  +AE +    +L  ++L  N +G  
Sbjct: 151 GPEGAVALAAALRENT-TLLTLKVGSNALGNDGAKAIAEALGANSALHALDLCSNGVGTV 209

Query: 403 GAEKIADALKQNRTITTIDLGG-NNIHSKGASAIARVLKDNSVITSLDLA---------- 451
           G + +A AL  N T+  + LGG + I    A A+A+ L   S +  LDLA          
Sbjct: 210 GIDALAAALGTNSTLRKLRLGGADQICPYSAHALAKALSAGSALQELDLACSAHGVTGLG 269

Query: 452 -YNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            Y+ +G D AK        H + +  L+LG   IG  GA  +A ML    ++  LDL +N
Sbjct: 270 GYHGLGDDAAKRFGAGFAAHPSLLRVLRLGRNNIGVEGARALAAMLGV-GSLRSLDLSSN 328

Query: 510 -GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL-CINYLQGAKCLAQSFKVVNEALTSIDL 567
             + DE        +   + + + + +L  +L CI     A     +    N AL  + L
Sbjct: 329 HDIGDE-----GAAALAAALVANPRSLLELNLNCIRSGPAAATALATALGANSALEKLSL 383

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
              ++RD+GA A+A AL AN    +  L L + F+ + G  AL  A+ L    + +E+NI
Sbjct: 384 NCTKVRDEGAKALAAALCANS--GLQELALEDAFIGRAGAVAL--AQALASNTTLRELNI 439



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 142/337 (42%), Gaps = 57/337 (16%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG-NPIGD 232
            G++G   +AE+LG N     +   +NG+   GI A    L +N  L+ L L G + I  
Sbjct: 178 LGNDGAKAIAEALGANSALHALDLCSNGVGTVGIDALAAALGTNSTLRKLRLGGADQICP 237

Query: 233 EGVKCLCDILVDNAGVERLQLSSV-----------DLRDEGAKAI-AELLKNNSILRVLE 280
                L   L   + ++ L L+              L D+ AK   A    + S+LRVL 
Sbjct: 238 YSAHALAKALSAGSALQELDLACSAHGVTGLGGYHGLGDDAAKRFGAGFAAHPSLLRVLR 297

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY--------------------------- 313
           L  N I   G  +LA A+L   ++RSL L+ N+                           
Sbjct: 298 LGRNNIGVEGARALA-AMLGVGSLRSLDLSSNHDIGDEGAAALAAALVANPRSLLELNLN 356

Query: 314 ---GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
               G   A ALA  L  N +L +L L+   + DEG +AL + L +  G L  L + +  
Sbjct: 357 CIRSGPAAATALATALGANSALEKLSLNCTKVRDEGAKALAAALCANSG-LQELALEDAF 415

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLY-----------MNDIGDEGAEKIADALKQNRTITT 419
           I   GA  +A+ + +  +L  +N+             N + D GA   A AL +N T+  
Sbjct: 416 IGRAGAVALAQALASNTTLRELNISNGRDEMEGAACANHVRDAGAVAFAQALGENSTLVK 475

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           + L G  + ++G +A+   L+ N+ +  + +  NP G
Sbjct: 476 LRLWGTGVGTRGCAALRSALETNTTLEFVSV-KNPQG 511


>gi|290996081|ref|XP_002680611.1| predicted protein [Naegleria gruberi]
 gi|284094232|gb|EFC47867.1| predicted protein [Naegleria gruberi]
          Length = 412

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 160/297 (53%), Gaps = 39/297 (13%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +L++S N IGDEG K + ++      +  L +S +++ DEGAK I+E+ +    L  L
Sbjct: 128 LTSLDISENQIGDEGAKYISEM----RQLTSLDISDIEIGDEGAKYISEMKQ----LTSL 179

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            ++ N I   G    A+ + E   + SLH+  N  G  GA    K +   K L  L++  
Sbjct: 180 NISYNAISDEG----AKFISEMKQLMSLHIYKNLIGDEGA----KYIREMKQLTSLNISY 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           NSI DEG + +     S   +L  LDI  N IS +GA    ++I   K L  +++  N+I
Sbjct: 232 NSISDEGAKFI-----SEMKQLTSLDIVFNEISGEGA----KFISEMKQLTSLDISDNEI 282

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIH--SKGASAIARVLKDNSVITSLDLAYNPIGA 457
           GDEG + +++ +KQ   +T++ + GN I   ++ +   A+ + +   +TSLD++YN I  
Sbjct: 283 GDEGVKYLSE-MKQ---LTSLTISGNEITYCNQISEEGAKFISEMKQLTSLDISYNLISD 338

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +GAK +SE+      + +L + +  I   GA+F+++M +    ++ LD+ +N + DE
Sbjct: 339 EGAKYISEM----KQLTSLNISYNSISGEGAKFISEMKQ----LTSLDIVSNRIGDE 387



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 183/379 (48%), Gaps = 95/379 (25%)

Query: 235 VKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           VK  C  L      E  QL+S+D+      DEGAK I+E+ +    L  L++++  I   
Sbjct: 110 VKFSCRFLEAKFITEMKQLTSLDISENQIGDEGAKYISEMRQ----LTSLDISDIEIGDE 165

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G    A+ + E   + SL+++ N     GA  +++     K L  LH++ N IGDEG   
Sbjct: 166 G----AKYISEMKQLTSLNISYNAISDEGAKFISEM----KQLMSLHIYKNLIGDEG--- 214

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
                                         A+YI+  K L  +N+  N I DEGA+ I++
Sbjct: 215 ------------------------------AKYIREMKQLTSLNISYNSISDEGAKFISE 244

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV--- 466
            +KQ   +T++D+  N I  +GA  I+ + +    +TSLD++ N IG +G K LSE+   
Sbjct: 245 -MKQ---LTSLDIVFNEISGEGAKFISEMKQ----LTSLDISDNEIGDEGVKYLSEMKQL 296

Query: 467 --LKFHGNINTLKLGWC-QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
             L   GN    ++ +C QI   GA+F+++M +    ++ LD+  N + DE   G   +S
Sbjct: 297 TSLTISGN----EITYCNQISEEGAKFISEMKQ----LTSLDISYNLISDE---GAKYIS 345

Query: 524 FFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
                   +K +   ++  N +  +GAK +++      + LTS+D+  N I D+GA  I+
Sbjct: 346 -------EMKQLTSLNISYNSISGEGAKFISEM-----KQLTSLDIVSNRIGDEGAKYIS 393

Query: 582 QALKANEDVAVTSLNLANN 600
           +  +      +TSLN+++N
Sbjct: 394 EMKQ------LTSLNISDN 406



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 163/323 (50%), Gaps = 66/323 (20%)

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A+ + E   + SL ++ N  G  GA  +++     + L  L +    IGDEG + +    
Sbjct: 119 AKFITEMKQLTSLDISENQIGDEGAKYISEM----RQLTSLDISDIEIGDEGAKYI---- 170

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
            S   +L  L+I  N+IS +GA    ++I   K L+ +++Y N IGDEGA+ I    ++ 
Sbjct: 171 -SEMKQLTSLNISYNAISDEGA----KFISEMKQLMSLHIYKNLIGDEGAKYI----REM 221

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           + +T++++  N+I  +GA  I+ + +    +TSLD+ +N I  +GAK +SE+      + 
Sbjct: 222 KQLTSLNISYNSISDEGAKFISEMKQ----LTSLDIVFNEISGEGAKFISEM----KQLT 273

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           +L +   +IG  G +++++M +    ++ L +  N +     + CN +S           
Sbjct: 274 SLDISDNEIGDEGVKYLSEMKQ----LTSLTISGNEI-----TYCNQIS----------- 313

Query: 535 MLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
                      +GAK +++      + LTS+D+++N I D+GA  I++  +      +TS
Sbjct: 314 ----------EEGAKFISEM-----KQLTSLDISYNLISDEGAKYISEMKQ------LTS 352

Query: 595 LNLANNFLTKFGQSALTDAKDLV 617
           LN++ N ++  G   +++ K L 
Sbjct: 353 LNISYNSISGEGAKFISEMKQLT 375



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 156/317 (49%), Gaps = 47/317 (14%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D+S    GDEG  +++E     +    +  +   I   G K    + Q
Sbjct: 120 KFITEMKQLTSLDISENQIGDEGAKYISEM----RQLTSLDISDIEIGDEGAKYISEMKQ 175

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L +LN+S N I DEG K + ++      +  L +    + DEGAK I E+ +    
Sbjct: 176 ----LTSLNISYNAISDEGAKFISEM----KQLMSLHIYKNLIGDEGAKYIREMKQ---- 223

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L ++ N I   G    A+ + E   + SL +  N     GA  +++     K L  L
Sbjct: 224 LTSLNISYNSISDEG----AKFISEMKQLTSLDIVFNEISGEGAKFISEM----KQLTSL 275

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDI-GN-----NSISAKGAFHVAEYIKNCKSL 389
            +  N IGDEG++ L     S   +L  L I GN     N IS +GA    ++I   K L
Sbjct: 276 DISDNEIGDEGVKYL-----SEMKQLTSLTISGNEITYCNQISEEGA----KFISEMKQL 326

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +++  N I DEGA+ I++ +KQ   +T++++  N+I  +GA  I+ + +    +TSLD
Sbjct: 327 TSLDISYNLISDEGAKYISE-MKQ---LTSLNISYNSISGEGAKFISEMKQ----LTSLD 378

Query: 450 LAYNPIGADGAKALSEV 466
           +  N IG +GAK +SE+
Sbjct: 379 IVSNRIGDEGAKYISEM 395



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 128/248 (51%), Gaps = 40/248 (16%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           F  A++I   K L  +++  N IGDEGA+ I++     R +T++D+    I  +GA  I+
Sbjct: 116 FLEAKFITEMKQLTSLDISENQIGDEGAKYISEM----RQLTSLDISDIEIGDEGAKYIS 171

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            + +    +TSL+++YN I  +GAK +SE+ +      +L +    IG  GA+++ +M +
Sbjct: 172 EMKQ----LTSLNISYNAISDEGAKFISEMKQLM----SLHIYKNLIGDEGAKYIREMKQ 223

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQS 554
               ++ L++  N + DE      G  F    I  +K +    +  N +  +GAK +++ 
Sbjct: 224 ----LTSLNISYNSISDE------GAKF----ISEMKQLTSLDIVFNEISGEGAKFISEM 269

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
                + LTS+D++ NEI D+G   +++  +      +TSL ++ N +T   Q +   AK
Sbjct: 270 -----KQLTSLDISDNEIGDEGVKYLSEMKQ------LTSLTISGNEITYCNQISEEGAK 318

Query: 615 DLVYEMSE 622
             + EM +
Sbjct: 319 -FISEMKQ 325


>gi|320167871|gb|EFW44770.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 215

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 122/231 (52%), Gaps = 35/231 (15%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           Y +  K+  W++L+ ++ G  GA  +A+ALK N  +T +DL  N I  +GA AIA  LK 
Sbjct: 11  YHQVTKASGWLSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKV 70

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +  LDL  N IG  GA+A +E LK + ++  L L   +IG +GA+ +A  +  N T+
Sbjct: 71  NTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTL 130

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           + L L  N + D                                 GA+ +A++ + VN  
Sbjct: 131 TKLHLYQNQIGDA--------------------------------GAQAIAEALR-VNTT 157

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           +  +DL  N+I D GA AIA+ALK N+   +TS+ L +NFLT+ G +AL +
Sbjct: 158 VNQLDLWANQIGDIGAQAIAEALKVNK--TLTSIRLEDNFLTEAGITALRE 206



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 102/204 (50%), Gaps = 29/204 (14%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA A+AE LK N+ +  L+L  N I   G  ++AEAL  N+T+  L L  N  G  GA A
Sbjct: 32  GAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEA 91

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            A+ L+ NKS+ EL+L  N IGD G +A                             +A 
Sbjct: 92  FAEALKVNKSVVELYLWVNRIGDAGAQA-----------------------------IAR 122

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I    +L  ++LY N IGD GA+ IA+AL+ N T+  +DL  N I   GA AIA  LK 
Sbjct: 123 AIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDIGAQAIAEALKV 182

Query: 442 NSVITSLDLAYNPIGADGAKALSE 465
           N  +TS+ L  N +   G  AL E
Sbjct: 183 NKTLTSIRLEDNFLTEAGITALRE 206



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 33/206 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  VAE +K   ++  ++LY N IGDEGA+ IA+ALK N T+  +DL  N I   GA A
Sbjct: 32  GAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEA 91

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            A  LK N  +  L L  N IG  GA+A++  +  +  +  L L   QIG +GA+ +A+ 
Sbjct: 92  FAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEA 151

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           LR N T++ LDL AN + D                                 GA+ +A++
Sbjct: 152 LRVNTTVNQLDLWANQIGD--------------------------------IGAQAIAEA 179

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAI 580
            K VN+ LTSI L  N + + G  A+
Sbjct: 180 LK-VNKTLTSIRLEDNFLTEAGITAL 204



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 29/207 (14%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L  +  G  GA A+A+ L+ N ++  L L+ N IGDEG +A                 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQA----------------- 63

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                       +AE +K   ++  ++L  N IGD GAE  A+ALK N+++  + L  N 
Sbjct: 64  ------------IAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNR 111

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I   GA AIAR +  N+ +T L L  N IG  GA+A++E L+ +  +N L L   QIG  
Sbjct: 112 IGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDI 171

Query: 487 GAEFVADMLRYNNTISILDLRANGLRD 513
           GA+ +A+ L+ N T++ + L  N L +
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTE 198



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 109/213 (51%), Gaps = 29/213 (13%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  +  G  G   + + L  N  V  L L    + DEGA+AIAE LK N+ + VL+L 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLR 80

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  + AEAL  N ++  L+L  N  G  GA A+A+ +  N +L +LHL+ N I
Sbjct: 81  ENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQI 140

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A                             +AE ++   ++  ++L+ N IGD 
Sbjct: 141 GDAGAQA-----------------------------IAEALRVNTTVNQLDLWANQIGDI 171

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           GA+ IA+ALK N+T+T+I L  N +   G +A+
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 81/154 (52%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N A+  L+L  N IGDEG + + + L  N  V  L L    + D GA+
Sbjct: 31  AGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAE 90

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A AE LK N  +  L L  N I  +G  ++A A++ N+T+  LHL  N  G  GA A+A+
Sbjct: 91  AFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAE 150

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            L  N ++ +L L  N IGD G +A+   L   K
Sbjct: 151 ALRVNTTVNQLDLWANQIGDIGAQAIAEALKVNK 184



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 87/176 (49%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           G  G   +AE+L  N     +    N I   G +A    L+ N  +  L+L  N IGD G
Sbjct: 29  GCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAG 88

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +   + L  N  V  L L    + D GA+AIA  +  N+ L  L L  N I  +G  ++
Sbjct: 89  AEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAI 148

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           AEAL  N+T+  L L  N  G +GA A+A+ L+ NK+L  + L  N + + GI AL
Sbjct: 149 AEALRVNTTVNQLDLWANQIGDIGAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + +D+     GDEG   +AE+L  N T   +    N I  AG +AF   L+ N ++  
Sbjct: 45  AVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVE 104

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L  N IGD G + +   +V N  + +L L    + D GA+AIAE L+ N+ +  L+L 
Sbjct: 105 LYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLW 164

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            N I   G  ++AEAL  N T+ S+ L  N+    G  AL
Sbjct: 165 ANQIGDIGAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 11/168 (6%)

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L  +  G  GA A++E LK +  +  L L   QIG  GA+ +A+ L+ N T+++LDLR
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLR 80

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSI 565
            N + D       G   F  A+   K ++   L +N +   GA+ +A++  VVN  LT +
Sbjct: 81  ENQIGDA------GAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAI-VVNTTLTKL 133

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            L  N+I D GA AIA+AL+ N    V  L+L  N +   G  A+ +A
Sbjct: 134 HLYQNQIGDAGAQAIAEALRVN--TTVNQLDLWANQIGDIGAQAIAEA 179



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 75/155 (48%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           +  ++  E  Q + E  K     + +D+     GD G    AE+L  N++  E+    N 
Sbjct: 52  YQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNR 111

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I  AG +A    +  N  L  L+L  N IGD G + + + L  N  V +L L +  + D 
Sbjct: 112 IGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDI 171

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           GA+AIAE LK N  L  + L +N +  +G T+L E
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITALRE 206


>gi|340380815|ref|XP_003388917.1| PREDICTED: uncharacterized protein C14orf166B homolog [Amphimedon
           queenslandica]
          Length = 455

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 130/247 (52%), Gaps = 1/247 (0%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +++LS + +G +G K +   L+ N  V  L LS   L  EG  AI ++LK N  +  L+L
Sbjct: 107 SIDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDL 166

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NN I  +G   L + L  N+T+  L+L+G+      A  L++ ++ +  +  L+L  N 
Sbjct: 167 SNNGIAATGAVMLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNE 226

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +  E    L+    +    L  LD+  N +  KGA  +A+ +K  + L  +NL  N  G 
Sbjct: 227 LS-EASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGT 285

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA  +AD+LK N T+T +D+  N I   G  AIA+VL+    + SL + +NPI   G  
Sbjct: 286 EGAVALADSLKINTTLTHLDITDNRILIDGVRAIAKVLQTIDSLQSLKIGHNPIQIIGVI 345

Query: 462 ALSEVLK 468
           AL E LK
Sbjct: 346 ALLEALK 352



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 1/247 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+S    G +G   +A +L  N T   ++ + NG+   G  A   +L+ N  +  L+L
Sbjct: 107 SIDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDL 166

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N I   G   L DIL  N  V  L LS     D+ A+ ++E++K++  +  L L++N 
Sbjct: 167 SNNGIAATGAVMLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNE 226

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +  +    +  AL E+  ++ L L+ NY    GA A+A+GL+ N+ L++L+L  N  G E
Sbjct: 227 LSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTE 286

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L      L  LDI +N I   G   +A+ ++   SL  + +  N I   G  
Sbjct: 287 GAVALADSLKINT-TLTHLDITDNRILIDGVRAIAKVLQTIDSLQSLKIGHNPIQIIGVI 345

Query: 406 KIADALK 412
            + +ALK
Sbjct: 346 ALLEALK 352



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 133/280 (47%), Gaps = 34/280 (12%)

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           S+ L+ +Y GA GA A+A  L  N ++  L+L  N +  EG  A++  L      +  LD
Sbjct: 107 SIDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLK-ENCYITHLD 165

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + NN I+A GA  + + + +  ++  +NL  +   D+ AE +++ +K +  +T ++L  N
Sbjct: 166 LSNNGIAATGAVMLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHN 225

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            +       I   L ++ V+  LDL++N +   GA A+++ LK +  +  L L +   G 
Sbjct: 226 ELSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGT 285

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  +AD L+ N T++ LD+  N +                                 +
Sbjct: 286 EGAVALADSLKINTTLTHLDITDNRI--------------------------------LI 313

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
            G + +A+  + + ++L S+ +  N I+  G  A+ +ALK
Sbjct: 314 DGVRAIAKVLQTI-DSLQSLKIGHNPIQIIGVIALLEALK 352



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 11/221 (4%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I+L  + +G +GA+ IA AL  N T+T ++L  N +  +G  AI  +LK+N  IT LDL+
Sbjct: 108 IDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDLS 167

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I A GA  L ++L  +  +  L L         AE ++++++ +  ++ L+L  N L
Sbjct: 168 NNGIAATGAVMLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNEL 227

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAF 569
             E      G +   S +  L+H+    L  NYL  +GA  +AQ  K  N+ L  ++L++
Sbjct: 228 S-EASGVLIGAALAESEV--LQHL---DLSWNYLRRKGAVAIAQGLK-PNQMLKKLNLSY 280

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           N    +GA A+A +LK N    +T L++ +N +   G  A+
Sbjct: 281 NGFGTEGAVALADSLKIN--TTLTHLDITDNRILIDGVRAI 319



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 122/234 (52%), Gaps = 1/234 (0%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++L+++ +   G  ++A AL+ N+T+ +L+L+ N     G  A+   L+ N  +  L L 
Sbjct: 108 IDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDLS 167

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I   G   L+  L+S    +  L++  +S   K A  ++E IK+   +  +NL  N+
Sbjct: 168 NNGIAATGAVMLLDILASNT-TVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNE 226

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + +     I  AL ++  +  +DL  N +  KGA AIA+ LK N ++  L+L+YN  G +
Sbjct: 227 LSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTE 286

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           GA AL++ LK +  +  L +   +I   G   +A +L+  +++  L +  N ++
Sbjct: 287 GAVALADSLKINTTLTHLDITDNRILIDGVRAIAKVLQTIDSLQSLKIGHNPIQ 340



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 1/225 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++S      EG   + + L  N     +  + NGI A G      +L SN  +  L
Sbjct: 133 VTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDLSNNGIAATGAVMLLDILASNTTVTHL 192

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLSG+   D+  + L +I+  +  V  L LS  +L +     I   L  + +L+ L+L+ 
Sbjct: 193 NLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNELSEASGVLIGAALAESEVLQHLDLSW 252

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +   G  ++A+ L  N  ++ L+L+ N  G  GA ALA  L+ N +L  L +  N I 
Sbjct: 253 NYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTEGAVALADSLKINTTLTHLDITDNRIL 312

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            +G+RA+   L +    L  L IG+N I   G   + E +KN  S
Sbjct: 313 IDGVRAIAKVLQTID-SLQSLKIGHNPIQIIGVIALLEALKNGTS 356



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 23/203 (11%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           +IDL  + + +KGA AIA  L  N+ +T+L+L+YN +  +G  A+ ++LK +  I  L L
Sbjct: 107 SIDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDL 166

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
               I A+GA  + D+L  N T++ L+L             +G SF   A   L  ++  
Sbjct: 167 SNNGIAATGAVMLLDILASNTTVTHLNL-------------SGSSFDDKAAEPLSEIIKS 213

Query: 539 SLCINYL--------QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
           S+ + +L        + +  L  +    +E L  +DL++N +R  GA AIAQ LK N+  
Sbjct: 214 SIRVTHLNLSHNELSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQ-- 271

Query: 591 AVTSLNLANNFLTKFGQSALTDA 613
            +  LNL+ N     G  AL D+
Sbjct: 272 MLKKLNLSYNGFGTEGAVALADS 294



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 5/252 (1%)

Query: 136 TNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           TNL   + G L  E    + +  KE    + +D+S       G   L + L  N T   +
Sbjct: 134 TNLNLSYNG-LCPEGGVAIIDMLKENCYITHLDLSNNGIAATGAVMLLDILASNTTVTHL 192

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           + + +       +    +++S+I +  LNLS N + +     +   L ++  ++ L LS 
Sbjct: 193 NLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNELSEASGVLIGAALAESEVLQHLDLSW 252

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             LR +GA AIA+ LK N +L+ L L+ N     G  +LA++L  N+T+  L +  N   
Sbjct: 253 NYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTEGAVALADSLKINTTLTHLDITDNRIL 312

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G  A+AK L+   SL+ L +  N I   G+ AL+  L  + G  +V  +G + I+   
Sbjct: 313 IDGVRAIAKVLQTIDSLQSLKIGHNPIQIIGVIALLEAL--KNGTSSVKYLGLDGITV-- 368

Query: 376 AFHVAEYIKNCK 387
             +VA+ I   +
Sbjct: 369 TLNVAKIITEMQ 380


>gi|281344854|gb|EFB20438.1| hypothetical protein PANDA_019718 [Ailuropoda melanoleuca]
          Length = 429

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 178/390 (45%), Gaps = 10/390 (2%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLR 259
           G+T    K     LQ+N +L  L+L  N +GD GV   L  +      + +L L +  L 
Sbjct: 8   GLTEMRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQSPTCKIRKLSLQNCCLT 67

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALG 318
             G   + ++L++   LR L LN+N +  +G   L   LL+    +  L +      A  
Sbjct: 68  KTGCGVLPDMLRSMPTLRELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAAS 127

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             +LA  L   +  +EL +  N +G+ G+R L  GL     +L VL + N  +++     
Sbjct: 128 CESLASALRAKRHFKELAVSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCED 187

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           +   + +  SL  ++L  N +GD+G A      L  +  I  + L   +I + G   + R
Sbjct: 188 LCGVVASKPSLQELDLGDNKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCR 247

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           VL+    +  + LA N +G +GA+ L E +L+    + +L +  C   A+  +  + ML 
Sbjct: 248 VLRAKESLKEMSLAGNALGDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLT 307

Query: 497 YNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
            N  +  L L  N L D  V   C GLS   +A+     +L+   C     G   LA S 
Sbjct: 308 RNTCLVELQLSNNKLGDCGVQQLCQGLSQPGAAL----QVLWLGDCDVAHSGCASLA-SV 362

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
            +VN +L  +DL+ N + ++G   + ++++
Sbjct: 363 LLVNRSLRELDLSNNCMGEEGILRLMESVE 392



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 4/325 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + +     + ++    GD GL  L   L   Q   E++      +TAA  ++  
Sbjct: 73  VLPDMLRSMPTLRELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLA 132

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
             L++    K L +S N +G+ GV+ LC  LVD+A  +E L+L +  L     + +  ++
Sbjct: 133 SALRAKRHFKELAVSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVV 192

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            +   L+ L+L +N +   G  +L   LL  S  IR L L        G   L + L   
Sbjct: 193 ASKPSLQELDLGDNKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAK 252

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+E+ L GN++GDEG R L   L     +L  L + + S +A    H +  +     L
Sbjct: 253 ESLKEMSLAGNALGDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCL 312

Query: 390 LWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + + L  N +GD G +++   L Q    +  + LG  ++   G +++A VL  N  +  L
Sbjct: 313 VELQLSNNKLGDCGVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNRSLREL 372

Query: 449 DLAYNPIGADGAKALSEVLKFHGNI 473
           DL+ N +G +G   L E ++  G +
Sbjct: 373 DLSNNCMGEEGILRLMESVEQPGCV 397



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 165/357 (46%), Gaps = 5/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L        ++S     +T  G      +L+S   L+
Sbjct: 26  SLTELSLCTNELGDAGVHLVLQGLQSPTCKIRKLSLQNCCLTKTGCGVLPDMLRSMPTLR 85

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L L+ NP+GD G++ LC  L+D    +E+LQ+   +L     +++A  L+     + L 
Sbjct: 86  ELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLASALRAKRHFKELA 145

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G   L   L++++  +  L L      +     L   +    SL+EL L  
Sbjct: 146 VSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVVASKPSLQELDLGD 205

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD+GI  L   L     ++ VL + +  I+  G   +   ++  +SL  ++L  N +
Sbjct: 206 NKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAKESLKEMSLAGNAL 265

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + ++L +    + ++ +   +  +      + +L  N+ +  L L+ N +G  
Sbjct: 266 GDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCLVELQLSNNKLGDC 325

Query: 459 GAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           G + L + L   G  +  L LG C +  SG   +A +L  N ++  LDL  N + +E
Sbjct: 326 GVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNRSLRELDLSNNCMGEE 382



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 150/383 (39%), Gaps = 30/383 (7%)

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
           +L    L +   K I+  L+ N  L  L L  N +  +G   + + L   +  IR L L 
Sbjct: 3   RLDDCGLTEMRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQSPTCKIRKLSLQ 62

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                  G   L   L    +LREL+L+ N +GD G++ L SGL   +  L  L +   +
Sbjct: 63  NCCLTKTGCGVLPDMLRSMPTLRELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCN 122

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++A     +A  ++  +    + +  N++G+ G   +   L  +   +  + L    + S
Sbjct: 123 LTAASCESLASALRAKRHFKELAVSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTS 182

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALS-EVLKFHGNINTLKLGWCQIGASGA 488
                +  V+     +  LDL  N +G  G   L   +L     I  L L  C I  +G 
Sbjct: 183 ASCEDLCGVVASKPSLQELDLGDNKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGC 242

Query: 489 EFVADMLRYNNTISILDLRANGLRDE----VCS-----GCN-------GLSFFHSAIYSL 532
             +  +LR   ++  + L  N L DE    +C       C          SF  ++    
Sbjct: 243 RDLCRVLRAKESLKEMSLAGNALGDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHF 302

Query: 533 KHMLFYSLCINYLQ---------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
             ML  + C+  LQ         G + L Q       AL  + L   ++   G  ++A  
Sbjct: 303 SSMLTRNTCLVELQLSNNKLGDCGVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASV 362

Query: 584 LKANEDVAVTSLNLANNFLTKFG 606
           L  N   ++  L+L+NN + + G
Sbjct: 363 LLVNR--SLRELDLSNNCMGEEG 383


>gi|32966213|gb|AAP92143.1| leucine-rich repeat protein N4C [synthetic construct]
          Length = 305

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 2/214 (0%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           E +    N +T AG+K    VL+SN +L+ L+LS N +GD GV+ L   L+D    +E L
Sbjct: 42  EYLDLNWNDLTEAGMKDLASVLRSNPSLRELDLSNNKLGDAGVRLLLQGLLDPGTRLENL 101

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
            L+  DL + G K +A +L++N  LR L L+NN +  +G   L + LL+  T +  L L+
Sbjct: 102 DLNESDLTEAGLKDLASVLRSNPSLRELTLSNNKLGDAGVRLLLQGLLDPGTRLEKLDLD 161

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                  G   LA  L  N SLREL L  N +GD G+R L+ GL     +L  LD+  N 
Sbjct: 162 QTDLTEAGMKDLASVLRSNPSLRELSLSSNKLGDAGVRLLLQGLLDPGTRLEKLDLNQND 221

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           ++      +A  +++  SL  ++L  N +GD G 
Sbjct: 222 LTEADLKDLASVLRSNPSLRELSLSNNKLGDAGV 255



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 9/222 (4%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKA 209
           + + A  LR+  S+   D+S    GD G+  L + L    T  E +    + +T AG+K 
Sbjct: 56  MKDLASVLRSNPSLRELDLSNNKLGDAGVRLLLQGLLDPGTRLENLDLNESDLTEAGLKD 115

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAE 268
              VL+SN +L+ L LS N +GD GV+ L   L+D    +E+L L   DL + G K +A 
Sbjct: 116 LASVLRSNPSLRELTLSNNKLGDAGVRLLLQGLLDPGTRLEKLDLDQTDLTEAGMKDLAS 175

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLE 327
           +L++N  LR L L++N +  +G   L + LL+  T +  L LN N         LA  L 
Sbjct: 176 VLRSNPSLRELSLSSNKLGDAGVRLLLQGLLDPGTRLEKLDLNQNDLTEADLKDLASVLR 235

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGL---SSRKGKLAVLDI 366
            N SLREL L  N +GD G+R L+ GL    +R  +L + DI
Sbjct: 236 SNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEQLVLYDI 277



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 2/220 (0%)

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-I 304
           A +E L L+  DL + G K +A +L++N  LR L+L+NN +  +G   L + LL+  T +
Sbjct: 39  ARLEYLDLNWNDLTEAGMKDLASVLRSNPSLRELDLSNNKLGDAGVRLLLQGLLDPGTRL 98

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            +L LN +     G   LA  L  N SLREL L  N +GD G+R L+ GL     +L  L
Sbjct: 99  ENLDLNESDLTEAGLKDLASVLRSNPSLRELTLSNNKLGDAGVRLLLQGLLDPGTRLEKL 158

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLG 423
           D+    ++  G   +A  +++  SL  ++L  N +GD G   +   L    T +  +DL 
Sbjct: 159 DLDQTDLTEAGMKDLASVLRSNPSLRELSLSSNKLGDAGVRLLLQGLLDPGTRLEKLDLN 218

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            N++       +A VL+ N  +  L L+ N +G  G + L
Sbjct: 219 QNDLTEADLKDLASVLRSNPSLRELSLSNNKLGDAGVRLL 258



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 2/181 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +    + D     L+  L     +L  LD+  N ++  G   +A  +++  SL  ++L
Sbjct: 15  LDIQSEELSDARWAELLPLLQQPYARLEYLDLNWNDLTEAGMKDLASVLRSNPSLRELDL 74

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +GD G   +   L    T +  +DL  +++   G   +A VL+ N  +  L L+ N
Sbjct: 75  SNNKLGDAGVRLLLQGLLDPGTRLENLDLNESDLTEAGLKDLASVLRSNPSLRELTLSNN 134

Query: 454 PIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            +G  G + L + L   G  +  L L    +  +G + +A +LR N ++  L L +N L 
Sbjct: 135 KLGDAGVRLLLQGLLDPGTRLEKLDLDQTDLTEAGMKDLASVLRSNPSLRELSLSSNKLG 194

Query: 513 D 513
           D
Sbjct: 195 D 195


>gi|428177965|gb|EKX46842.1| hypothetical protein GUITHDRAFT_59521, partial [Guillardia theta
           CCMP2712]
          Length = 255

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 1/232 (0%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A  ++ N  L++L+L++N I   G ++L+  L+ NST+ SL +  N     G   LA 
Sbjct: 16  ALAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIASNGISQHGVACLAA 75

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GL+ N SL+ L L  N  GD G+  L   +  R   L  L +G N I   GA  +++   
Sbjct: 76  GLKHNSSLKSLELSFNGFGDSGVVFLADAVQ-RNSSLQYLGLGFNGILESGASALSQACL 134

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K L  I L  N IGD GAE ++  L++N  +  + L  N I  KGA ++AR L+ NS 
Sbjct: 135 MSKCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSN 194

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           +  + LA N I  DGA +L+E+L  + ++  L L    IG  G+  +A   R
Sbjct: 195 LKVIGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLAKAHR 246



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 132/236 (55%), Gaps = 1/236 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++ N  LK L+LS N I D+G   L  +L+ N+ +E L ++S  +   G   +A  LK+N
Sbjct: 21  IRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIASNGISQHGVACLAAGLKHN 80

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S L+ LEL+ N    SG   LA+A+  NS+++ L L  N     GA+AL++    +K L 
Sbjct: 81  SSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACLMSKCLT 140

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           ++ L  N+IGD G   ++SG+  R   L VL +  N I+ KGA  +A  +++  +L  I 
Sbjct: 141 KIELSYNAIGDCGAE-ILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSNLKVIG 199

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           L  N+I D+GA  +A+ L  N ++  + L  N+I   G++ +A+  +  +V T ++
Sbjct: 200 LACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLAKAHRTTTVCTPMN 255



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 4/238 (1%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA  + YN+T + +  ++N I+  G  A   VL +N  L++L+++ N I   GV CL   
Sbjct: 17  LAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIASNGISQHGVACLAAG 76

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N+ ++ L+LS     D G   +A+ ++ NS L+ L L  N I  SG ++L++A L +
Sbjct: 77  LKHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACLMS 136

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  + L+ N  G  GA  L+  LE N +L+ L L  N I D+G ++L   L S    L
Sbjct: 137 KCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNS-NL 195

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            V+ +  N I+  GA  +AE + +  SL  + L  NDIG+ G+  +A   K +RT T 
Sbjct: 196 KVIGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLA---KAHRTTTV 250



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 1/194 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA+ +  NK+L+ L L  NSI D+G  AL + L +    L  LDI +N IS  G   +A
Sbjct: 16  ALAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANS-TLESLDIASNGISQHGVACLA 74

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             +K+  SL  + L  N  GD G   +ADA+++N ++  + LG N I   GASA+++   
Sbjct: 75  AGLKHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACL 134

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            +  +T ++L+YN IG  GA+ LS +L+ +  +  L L    I   GA+ +A  L  N+ 
Sbjct: 135 MSKCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSN 194

Query: 501 ISILDLRANGLRDE 514
           + ++ L  N + D+
Sbjct: 195 LKVIGLACNEITDD 208



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 39/276 (14%)

Query: 342 IGDEGIRALMSGLSSRKGK----LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           +GD  I  L+S   +R+ +    L +LD+ +NSIS +GA  ++  +    +L  +++  N
Sbjct: 4   LGDNDITPLLSVALAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIASN 63

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            I   G   +A  LK N ++ +++L  N     G   +A  ++ NS +  L L +N I  
Sbjct: 64  GISQHGVACLAAGLKHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILE 123

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            GA ALS+       +  ++L +  IG  GAE ++ ML  N  + +L L  NG+ D    
Sbjct: 124 SGASALSQACLMSKCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITD---- 179

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
                                       +GAK LA++ +  N  L  I LA NEI DDGA
Sbjct: 180 ----------------------------KGAKSLARALES-NSNLKVIGLACNEITDDGA 210

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            ++A+ L  N+  ++  L L  N + + G + L  A
Sbjct: 211 ASLAEMLNHND--SLQGLYLEENDIGEVGSALLAKA 244



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 28/167 (16%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD------- 211
           K   +  S+++S   FGD G+ FLA+++  N + + +    NGI  +G  A         
Sbjct: 78  KHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACLMSK 137

Query: 212 ---------------------GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
                                G+L+ N ALK L L  N I D+G K L   L  N+ ++ 
Sbjct: 138 CLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSNLKV 197

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           + L+  ++ D+GA ++AE+L +N  L+ L L  N I   G   LA+A
Sbjct: 198 IGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLAKA 244



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 141 GFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
           GF G +       L++     +  + +++S    GD G   L+  L  N   + +    N
Sbjct: 117 GFNG-ILESGASALSQACLMSKCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCN 175

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           GIT  G K+    L+SN  LK + L+ N I D+G   L ++L  N  ++ L L   D+ +
Sbjct: 176 GITDKGAKSLARALESNSNLKVIGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGE 235

Query: 261 EGAKAIAELLKNNSI 275
            G+  +A+  +  ++
Sbjct: 236 VGSALLAKAHRTTTV 250


>gi|326678406|ref|XP_683789.5| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Danio
            rerio]
          Length = 1291

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 216/468 (46%), Gaps = 23/468 (4%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + SS D S  ++    L F+   L  ++  EE++     +T     A   VL+S+ +LK 
Sbjct: 770  SLSSADFSSAHWS--ALAFVL--LTSDEEMEELNDC--NLTDRSCSALATVLESDTSLKE 823

Query: 223  LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLE 280
            LN+S N + D GVK LC  L D    +E L+LS  ++ +EG KA+A  L++N S L  L+
Sbjct: 824  LNMSNNNLQDSGVKLLCTGLKDMKCELEILRLSDCNITEEGYKALASALRSNPSHLLELD 883

Query: 281  LNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLH 338
            L  N    SG   L + L + N T+++L L G         +L   L+ N S LREL L 
Sbjct: 884  LRGNDPGESGVKELDDLLQDPNCTLKTLSLGGCSFTDDQWESLTSALKLNPSHLRELILM 943

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMN 397
             N  G+ G++ L   L   + KL  L +   SI+ +    +   +K N   L  +NL  N
Sbjct: 944  WNGPGESGVKILSDFLIEPQLKLEKLCLCYCSITEERCEILTSALKSNPSHLRELNLSQN 1003

Query: 398  DIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPI 455
              GD G + ++D L   ++ +  + L   +I  +    +   LK N S +  L+L+ N +
Sbjct: 1004 IPGDSGMKNLSDLLMNPQSKLEKLQLCKCSITEEQCVILTSALKSNPSHLRDLNLSLNNL 1063

Query: 456  GADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRD 513
            G  G K LS++L K H  +  L L  C I       +A  L+ N + +  L L  N L D
Sbjct: 1064 GDSGVKTLSDLLMKPHLKMEKLWLCKCSITEEQCVILASALKSNPSHLRELSLSENNLGD 1123

Query: 514  EVCSGCNGLS-FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
               SG   LS       + L+  L  S C    +  + L  + K     L  +D++ N+I
Sbjct: 1124 ---SGVKNLSDLLMKPQFKLEK-LHLSHCSITEEQCEILTSALKSNPSHLRELDISKNQI 1179

Query: 573  RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ--SALTDAKDLVY 618
            R+ G   +   L  N D  + +L L +  +T        LT+ K L +
Sbjct: 1180 RNTGVNLLCDVLN-NSDCKLETLRLNDCGITDVSSLTQCLTNTKALQF 1226


>gi|290991306|ref|XP_002678276.1| predicted protein [Naegleria gruberi]
 gi|284091888|gb|EFC45532.1| predicted protein [Naegleria gruberi]
          Length = 445

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 182/363 (50%), Gaps = 78/363 (21%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +L++ GN IGDEG+K + ++      +  L +S   + D+G K I+++ +    L  L
Sbjct: 127 LTSLDIGGNQIGDEGIKLISEM----KQLTLLDISGNSIGDKGVKPISKMKQ----LTSL 178

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            + NN I  +G    ++ ++E   + SL ++ N  G  GA ++++     K L  L + G
Sbjct: 179 NIYNNEIGVAG----SKFIIEMKQLTSLDISYNEIGDEGAKSISEL----KQLTSLTVSG 230

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEGI+     L S   +L +LDI  NSI  KG   +++     K L  +N+Y N+I
Sbjct: 231 NQIGDEGIK-----LISEMKQLTLLDISGNSIGDKGVKPISK----MKQLTSLNIYNNEI 281

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G  G++ I + +KQ                               +TSLD++YN IG +G
Sbjct: 282 GVAGSKFIIE-MKQ-------------------------------LTSLDISYNEIGDEG 309

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
           AK++SE+      + +L +   QIG  G + +++M      +++LD+    + D+   G 
Sbjct: 310 AKSISEM----KQLTSLTISGNQIGDEGIKLISEM----KQLTLLDISGKSVGDK---GV 358

Query: 520 NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
             +S     +  L  +  Y+  I  + GAK +++      + LTS+D+++NEI D+GA +
Sbjct: 359 KSIS----KMKQLTSLTIYTNEIG-VAGAKFISEM-----KQLTSLDISYNEIGDEGAKS 408

Query: 580 IAQ 582
           I++
Sbjct: 409 ISE 411



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 71/360 (19%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E++  +S+D+ G   GDEG+  ++E     +    +  + N I   G+K    + Q    
Sbjct: 123 EMKRLTSLDIGGNQIGDEGIKLISEM----KQLTLLDISGNSIGDKGVKPISKMKQ---- 174

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNS 274
           L +LN+  N IG  G K +         +E  QL+S+D+      DEGAK+I+EL +   
Sbjct: 175 LTSLNIYNNEIGVAGSKFI---------IEMKQLTSLDISYNEIGDEGAKSISELKQ--- 222

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L ++ N I   G   ++E       +  L ++GN  G  G   ++K     K L  
Sbjct: 223 -LTSLTVSGNQIGDEGIKLISEM----KQLTLLDISGNSIGDKGVKPISK----MKQLTS 273

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+++ N IG  G + ++        +L  LDI  N I  +GA  ++E     K L  + +
Sbjct: 274 LNIYNNEIGVAGSKFII-----EMKQLTSLDISYNEIGDEGAKSISE----MKQLTSLTI 324

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV---------- 444
             N IGDEG + I++     + +T +D+ G ++  KG  +I+++ +  S+          
Sbjct: 325 SGNQIGDEGIKLISEM----KQLTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEIGVA 380

Query: 445 ----------ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
                     +TSLD++YN IG +GAK++SE+      +  L +    IG  G++F+  M
Sbjct: 381 GAKFISEMKQLTSLDISYNEIGDEGAKSISEL----KQLTLLDISGNGIGDEGSKFIIGM 436



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 44/287 (15%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L  L++  N I DE  ++++        +L  LDIG N I  +G   ++E     K L
Sbjct: 101 KQLTSLNISNNQINDETAKSII-----EMKRLTSLDIGGNQIGDEGIKLISE----MKQL 151

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +++  N IGD+G + I+  +KQ   +T++++  N I   G+  I  + +    +TSLD
Sbjct: 152 TLLDISGNSIGDKGVKPIS-KMKQ---LTSLNIYNNEIGVAGSKFIIEMKQ----LTSLD 203

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++YN IG +GAK++SE+      + +L +   QIG  G + +++M      +++LD+  N
Sbjct: 204 ISYNEIGDEGAKSISEL----KQLTSLTVSGNQIGDEGIKLISEM----KQLTLLDISGN 255

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF 569
            + D+              I  +K +   ++  N +  A      F +  + LTS+D+++
Sbjct: 256 SIGDKGVK----------PISKMKQLTSLNIYNNEIGVA---GSKFIIEMKQLTSLDISY 302

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           NEI D+GA +I++  +      +TSL ++ N +   G   +++ K L
Sbjct: 303 NEIGDEGAKSISEMKQ------LTSLTISGNQIGDEGIKLISEMKQL 343


>gi|224062521|ref|XP_002300846.1| predicted protein [Populus trichocarpa]
 gi|222842572|gb|EEE80119.1| predicted protein [Populus trichocarpa]
          Length = 543

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 1/275 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF+ +L++   L+ L L  + I +E  + +C+++     ++ L   +    
Sbjct: 225 NALGEKGVRAFEKLLKTQNNLEELYLINDGISEEAARAVCELIPSTEKLKVLHFHNNMTG 284

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE++K ++ L     ++  +   G  +LAEAL   + +R L L  N  G    
Sbjct: 285 DEGAVAIAEMVKRSTALEDFRCSSTRVGLEGGVALAEALGSCNHLRKLDLRDNMFGVEAG 344

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL++ L     L E +L   ++ DEG  AL + L      L VLD+  N I+AKGA  +
Sbjct: 345 IALSRSLFAFADLTEAYLSYLNLEDEGAEALANALKECAPSLEVLDMAGNDITAKGASSL 404

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           A  I   + L  +NL  N++ DEGA  IA A++     +  +DL  N I   GA  +A+ 
Sbjct: 405 AACIAAKQFLTKLNLSENELKDEGAILIAKAIEVGHGQLNEVDLSINAIRRAGARLLAQA 464

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           + D     SL++  N I  +G   + ++ K   N+
Sbjct: 465 VVDKPGFKSLNINGNYISDEGIDEVKDIFKGLPNV 499



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 13/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG  +LR L+L  N++G++G+RA    L + +  L  L + N+ IS + A  V
Sbjct: 206 NIFSSALEGC-NLRYLNLSNNALGEKGVRAFEKLLKT-QNNLEELYLINDGISEEAARAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I + + L  ++ + N  GDEGA  IA+ +K++  +         +  +G  A+A  L
Sbjct: 264 CELIPSTEKLKVLHFHNNMTGDEGAVAIAEMVKRSTALEDFRCSSTRVGLEGGVALAEAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY-N 498
              + +  LDL  N  G +   ALS  L    ++    L +  +   GAE +A+ L+   
Sbjct: 324 GSCNHLRKLDLRDNMFGVEAGIALSRSLFAFADLTEAYLSYLNLEDEGAEALANALKECA 383

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++ +LD+  N +         G S   + I + + +   +L  N L  +GA  +A++ +
Sbjct: 384 PSLEVLDMAGNDIT------AKGASSLAACIAAKQFLTKLNLSENELKDEGAILIAKAIE 437

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           V +  L  +DL+ N IR  GA  +AQA+   +     SLN+  N+++  G   + D
Sbjct: 438 VGHGQLNEVDLSINAIRRAGARLLAQAVV--DKPGFKSLNINGNYISDEGIDEVKD 491


>gi|126631387|gb|AAI34205.1| LOC556175 protein [Danio rerio]
          Length = 414

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 160/309 (51%), Gaps = 10/309 (3%)

Query: 223 LNLSGNP-----IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           L L+GN      + D+ +  L   L  N+ ++ L L    + D+GA  IA L++++  L+
Sbjct: 41  LKLAGNDQPGARLTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQ 100

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L+L  N I+  G   +A++L +N T+++L + GN  G  GA  LA  L+ N +L E+ +
Sbjct: 101 SLDLMCNDIEADGAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDV 160

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINL 394
               +  + + A    L + K ++  +++      S+  +   H+A+ +    +L  +++
Sbjct: 161 SDCDLATQSVIAFAIVLMNNK-RICAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHM 219

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             +D+ D G E + +ALK+N ++  +DL  N I   GA  ++ VLK N  +  LDL++N 
Sbjct: 220 GKHDMTDTGVETLCEALKRNISLRYLDLCCNRITRDGAKHLSEVLKQNCSLEILDLSFNR 279

Query: 455 IGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           I  DGA  LSE +K  H  +  L +   +I   G   ++  +R N++++ + +  N   +
Sbjct: 280 IEDDGAIHLSEAIKLPHSKLKALSVTSNKIRKGGLLSLSAAMRVNSSLTHIYIWGNKHEE 339

Query: 514 EVCSGCNGL 522
            VC   +GL
Sbjct: 340 PVCEAFSGL 348



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 18/313 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   +D+      D+G   +A  +  +++ + +    N I A G +     L  NI LKT
Sbjct: 70  AIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKSLHKNITLKT 129

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GN IG++G   L  +L  NA +E + +S  DL  +   A A +L NN  +  + ++
Sbjct: 130 LRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNNKRICAINVS 189

Query: 283 NNM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +   +       +A+ L+ N+T++ LH+  +     G   L + L+ N SLR L L  
Sbjct: 190 RPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVETLCEALKRNISLRYLDLCC 249

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMND 398
           N I  +G + L S +  +   L +LD+  N I   GA H++E IK   S L  +++  N 
Sbjct: 250 NRITRDGAKHL-SEVLKQNCSLEILDLSFNRIEDDGAIHLSEAIKLPHSKLKALSVTSNK 308

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA------RVLKDNSVITSLDLAY 452
           I   G   ++ A++ N ++T I + GN        A +      R+LK+++ ++      
Sbjct: 309 IRKGGLLSLSAAMRVNSSLTHIYIWGNKHEEPVCEAFSGLMSSGRLLKEHTDVS------ 362

Query: 453 NPIGADGAKALSE 465
            P   DG   L+E
Sbjct: 363 -PYEVDGHVFLAE 374



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 140/268 (52%), Gaps = 17/268 (6%)

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           + G S+ KG    LD+  N I+ KGA H+A  I++ KSL  ++L  NDI  +GAE IA +
Sbjct: 65  LEGNSAIKG----LDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKS 120

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L +N T+ T+ + GN I ++GA  +A +L+ N+ +  +D++   +      A + VL  +
Sbjct: 121 LHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNN 180

Query: 471 GNINTLKLGWCQIGASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
             I  + +    + +   E    +A ML  NNT+  L +  + + D       G+     
Sbjct: 181 KRICAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTD------TGVETLCE 234

Query: 528 AIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           A+     + +  LC N +   GAK L++  K  N +L  +DL+FN I DDGA  +++A+K
Sbjct: 235 ALKRNISLRYLDLCCNRITRDGAKHLSEVLK-QNCSLEILDLSFNRIEDDGAIHLSEAIK 293

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDA 613
                 + +L++ +N + K G  +L+ A
Sbjct: 294 LPHS-KLKALSVTSNKIRKGGLLSLSAA 320



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 39/303 (12%)

Query: 184 ESLGYNQTAEE-VSFAANG-----ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           E LG N++++  +  A N      +T   +      L+ N A+K L+L  N I D+G   
Sbjct: 29  EVLGNNKSSDCCLKLAGNDQPGARLTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVH 88

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           +  ++ D+  ++ L L   D+  +GA+ IA+ L  N  L+ L +  N I   G   LA  
Sbjct: 89  IAHLIQDSKSLQSLDLMCNDIEADGAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATM 148

Query: 298 LLENSTIRSLH------------------LNGNYGGALGAN-------------ALAKGL 326
           L  N+T+  +                   +N     A+  +              +A+ L
Sbjct: 149 LQINATLEEVDVSDCDLATQSVIAFAIVLMNNKRICAINVSRPLLFSLQEETTVHMAQML 208

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N +L+ELH+  + + D G+  L   L  R   L  LD+  N I+  GA H++E +K  
Sbjct: 209 VVNNTLKELHMGKHDMTDTGVETLCEAL-KRNISLRYLDLCCNRITRDGAKHLSEVLKQN 267

Query: 387 KSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            SL  ++L  N I D+GA  +++A+K  +  +  + +  N I   G  +++  ++ NS +
Sbjct: 268 CSLEILDLSFNRIEDDGAIHLSEAIKLPHSKLKALSVTSNKIRKGGLLSLSAAMRVNSSL 327

Query: 446 TSL 448
           T +
Sbjct: 328 THI 330



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 8/216 (3%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+    +   L+ N  I  +DL  N I  KGA  IA +++D+  + SLDL  N I AD
Sbjct: 53  LTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEAD 112

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+ +++ L  +  + TL++   +IG  GA  +A ML+ N T+  +D+    L  +    
Sbjct: 113 GAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIA 172

Query: 519 CNGLSFFHSAIYSL--KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
              +   +  I ++     L +SL     +    +AQ   VVN  L  + +  +++ D G
Sbjct: 173 FAIVLMNNKRICAINVSRPLLFSL---QEETTVHMAQML-VVNNTLKELHMGKHDMTDTG 228

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
              + +ALK N  +++  L+L  N +T+ G   L++
Sbjct: 229 VETLCEALKRN--ISLRYLDLCCNRITRDGAKHLSE 262


>gi|344308889|ref|XP_003423109.1| PREDICTED: ribonuclease inhibitor-like [Loxodonta africana]
          Length = 456

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 167/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + ++L G      ++S     +TAA      G L+    L 
Sbjct: 52  SLTELSLHNSELGDAGVCQVLQALQGPACKICKLSLQNCSLTAACCTVLPGTLRWLPTLL 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L LS NP+GDEG++ LC+ L D    +ER+QL   +L     + +A +L     LR L 
Sbjct: 112 ELRLSDNPLGDEGLQLLCEGLRDPQCHLERVQLEYCNLTAASCEPLAAVLPAKLGLRELV 171

Query: 281 LNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           L+NN +  +G   L   LL     + +L L      A     L   +    SL+EL L  
Sbjct: 172 LSNNDLGEAGVQVLCRGLLGATCPLETLKLASCGVTAANCKDLCSIVATKDSLQELDLGE 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           + +GD G+ AL  GL S   KL  L +    IS++G   +++ ++  +SL  ++L  N++
Sbjct: 232 SKLGDAGMAALCPGLLSPSSKLKTLWLWECDISSEGCREISQVLRAKESLKELSLMGNEL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GD+GA  + +AL++    + ++ +             + +L  N  +  L L+ N +G  
Sbjct: 292 GDQGARLLCEALREPGCRLESLWVKACGFTDACCPDFSTMLAQNKFLLELQLSNNKLGDT 351

Query: 459 GAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G  +  L LG C +  SG   +A +L  + ++  LDL  N + D
Sbjct: 352 GVQQLCQGLSQPGATLQMLCLGDCDVTDSGCTALASLLLSSRSLRELDLSNNCMGD 407



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 3/248 (1%)

Query: 169 MSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           +S  + G+ G+  L   L G     E +  A+ G+TAA  K    ++ +  +L+ L+L  
Sbjct: 172 LSNNDLGEAGVQVLCRGLLGATCPLETLKLASCGVTAANCKDLCSIVATKDSLQELDLGE 231

Query: 228 NPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           + +GD G+  LC  +L  ++ ++ L L   D+  EG + I+++L+    L+ L L  N +
Sbjct: 232 SKLGDAGMAALCPGLLSPSSKLKTLWLWECDISSEGCREISQVLRAKESLKELSLMGNEL 291

Query: 287 DYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
              G   L EAL E    + SL +             +  L  NK L EL L  N +GD 
Sbjct: 292 GDQGARLLCEALREPGCRLESLWVKACGFTDACCPDFSTMLAQNKFLLELQLSNNKLGDT 351

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L  GLS     L +L +G+  ++  G   +A  + + +SL  ++L  N +GD G  
Sbjct: 352 GVQQLCQGLSQPGATLQMLCLGDCDVTDSGCTALASLLLSSRSLRELDLSNNCMGDAGVL 411

Query: 406 KIADALKQ 413
           ++ ++L+Q
Sbjct: 412 QLVESLRQ 419



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 177/429 (41%), Gaps = 17/429 (3%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E L   Q  E +     G+T A  K     LQ+N +L  L+L  + +GD GV   C +L 
Sbjct: 17  ELLPRIQQVEVIRLDDCGLTEARCKDISSALQANPSLTELSLHNSELGDAGV---CQVLQ 73

Query: 244 DNAG----VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
              G    + +L L +  L       +   L+    L  L L++N +   G   L E L 
Sbjct: 74  ALQGPACKICKLSLQNCSLTAACCTVLPGTLRWLPTLLELRLSDNPLGDEGLQLLCEGLR 133

Query: 300 ENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           +    +  + L      A     LA  L     LREL L  N +G+ G++ L  GL    
Sbjct: 134 DPQCHLERVQLEYCNLTAASCEPLAAVLPAKLGLRELVLSNNDLGEAGVQVLCRGLLGAT 193

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTI 417
             L  L + +  ++A     +   +    SL  ++L  + +GD G   +    L  +  +
Sbjct: 194 CPLETLKLASCGVTAANCKDLCSIVATKDSLQELDLGESKLGDAGMAALCPGLLSPSSKL 253

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTL 476
            T+ L   +I S+G   I++VL+    +  L L  N +G  GA+ L E L+  G  + +L
Sbjct: 254 KTLWLWECDISSEGCREISQVLRAKESLKELSLMGNELGDQGARLLCEALREPGCRLESL 313

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHM 535
            +  C    +     + ML  N  +  L L  N L D  V   C GLS   + +     M
Sbjct: 314 WVKACGFTDACCPDFSTMLAQNKFLLELQLSNNKLGDTGVQQLCQGLSQPGATL----QM 369

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           L    C     G      S  + + +L  +DL+ N + D G   + ++L+     A+  L
Sbjct: 370 LCLGDCDVTDSGCT-ALASLLLSSRSLRELDLSNNCMGDAGVLQLVESLR-QPGCALQQL 427

Query: 596 NLANNFLTK 604
            L + +L++
Sbjct: 428 VLYDTYLSE 436


>gi|395544764|ref|XP_003774277.1| PREDICTED: ribonuclease inhibitor [Sarcophilus harrisii]
          Length = 326

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 130/254 (51%), Gaps = 7/254 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + ++     D G+  +  SL       +++S     IT A  K    +L++   L 
Sbjct: 52  SLTELSLANNELRDSGVQMVLSSLQTPTCKIQKLSLQNCNITGASCKMIPALLRTKSTLT 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L LS N +GDEGVK LC+ L+D    ++RL+L   +      +A++ +LK  + L+ L 
Sbjct: 112 DLQLSDNHLGDEGVKLLCEGLMDPKCNLQRLELEYCEFTAASCEALSSVLKTKNSLQELT 171

Query: 281 LNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA--LAKGLEGNKSLRELHL 337
           LNNN +  +G   L + L++ N  ++ L L G   G   AN   L+  L+  +SL EL L
Sbjct: 172 LNNNELGEAGVLLLCQGLMDPNCNLQVLKLEG--CGVTPANCRNLSTVLQTKESLEELCL 229

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N IGD G+  L  G+ S   +L +L +    I+A+G   +A+ +K    L  ++L  N
Sbjct: 230 GENKIGDAGLAQLCQGILSPTCRLKILWLWECDITAEGCRALAQVLKGKACLKKLSLICN 289

Query: 398 DIGDEGAEKIADAL 411
            +GD+GAE +  AL
Sbjct: 290 QLGDQGAELLCQAL 303



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 3/270 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLR 259
           G+T A       VLQ N++L  L+L+ N + D GV+  L  +      +++L L + ++ 
Sbjct: 34  GLTDAMCAKISSVLQDNLSLTELSLANNELRDSGVQMVLSSLQTPTCKIQKLSLQNCNIT 93

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
               K I  LL+  S L  L+L++N +   G   L E L++    ++ L L      A  
Sbjct: 94  GASCKMIPALLRTKSTLTDLQLSDNHLGDEGVKLLCEGLMDPKCNLQRLELEYCEFTAAS 153

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             AL+  L+   SL+EL L+ N +G+ G+  L  GL      L VL +    ++     +
Sbjct: 154 CEALSSVLKTKNSLQELTLNNNELGEAGVLLLCQGLMDPNCNLQVLKLEGCGVTPANCRN 213

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++  ++  +SL  + L  N IGD G  ++    L     +  + L   +I ++G  A+A+
Sbjct: 214 LSTVLQTKESLEELCLGENKIGDAGLAQLCQGILSPTCRLKILWLWECDITAEGCRALAQ 273

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           VLK  + +  L L  N +G  GA+ L + L
Sbjct: 274 VLKGKACLKKLSLICNQLGDQGAELLCQAL 303



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 14/265 (5%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N SL EL L  N + D G++ ++S L +   K+  L + N +I+      +   ++ 
Sbjct: 47  LQDNLSLTELSLANNELRDSGVQMVLSSLQTPTCKIQKLSLQNCNITGASCKMIPALLRT 106

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSV 444
             +L  + L  N +GDEG + + + L   +  +  ++L      +    A++ VLK  + 
Sbjct: 107 KSTLTDLQLSDNHLGDEGVKLLCEGLMDPKCNLQRLELEYCEFTAASCEALSSVLKTKNS 166

Query: 445 ITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           +  L L  N +G  G   L + ++  + N+  LKL  C +  +    ++ +L+   ++  
Sbjct: 167 LQELTLNNNELGEAGVLLLCQGLMDPNCNLQVLKLEGCGVTPANCRNLSTVLQTKESLEE 226

Query: 504 LDLRANGLRD----EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVN 559
           L L  N + D    ++C G        S    LK +  +  C    +G + LAQ  K   
Sbjct: 227 LCLGENKIGDAGLAQLCQG------ILSPTCRLKILWLWE-CDITAEGCRALAQVLK-GK 278

Query: 560 EALTSIDLAFNEIRDDGAFAIAQAL 584
             L  + L  N++ D GA  + QAL
Sbjct: 279 ACLKKLSLICNQLGDQGAELLCQAL 303



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 2/153 (1%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           S + L+   K   +   + ++    G+ G+  L + L   N   + +     G+T A  +
Sbjct: 153 SCEALSSVLKTKNSLQELTLNNNELGEAGVLLLCQGLMDPNCNLQVLKLEGCGVTPANCR 212

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIA 267
               VLQ+  +L+ L L  N IGD G+  LC  IL     ++ L L   D+  EG +A+A
Sbjct: 213 NLSTVLQTKESLEELCLGENKIGDAGLAQLCQGILSPTCRLKILWLWECDITAEGCRALA 272

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
           ++LK  + L+ L L  N +   G   L +ALL+
Sbjct: 273 QVLKGKACLKKLSLICNQLGDQGAELLCQALLD 305


>gi|326435597|gb|EGD81167.1| hypothetical protein PTSG_11207 [Salpingoeca sp. ATCC 50818]
          Length = 1485

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 97/175 (55%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+ G   GD G   +AE+L  N   E +  A N I   G  A   +L+ N  LK LNL+
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLN 100

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGDEG   L ++L  N  +  L+L    + DEGA A+AE+L++N+ + +L L+ N I
Sbjct: 101 NNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSI 160

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              G  +LAE L  N+T+ +L L+ N    +G  AL   L+ N++L EL +  NS
Sbjct: 161 GPEGAVALAEMLKHNTTLTALDLDNNSITPVGGAALGAALDQNRTLEELCIEKNS 215



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 101/190 (53%), Gaps = 2/190 (1%)

Query: 187 GYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           G  +  EEV +  A      G+K     + +N     ++L G  +GD G + + + L DN
Sbjct: 4   GEKRAREEVEALLAQTKVKDGVKNKIRAIANNTCPGGIDLGGYGLGDIGARAVAEALKDN 63

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             +E L L+   + DEGA A+AE+LK+N+ L++L LNNN I   G  +LAE L  N T+ 
Sbjct: 64  TCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNNNSIGDEGAVALAEMLKHNMTMT 123

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L  N  G  GA ALA+ LE N ++  L L  NSIG EG  AL   L      L  LD
Sbjct: 124 WLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIGPEGAVALAEML-KHNTTLTALD 182

Query: 366 IGNNSISAKG 375
           + NNSI+  G
Sbjct: 183 LDNNSITPVG 192



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 90/148 (60%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+G   +   GA  VAE +K+   L  ++L +N IGDEGA  +A+ LK N T+  ++L 
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLN 100

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N+I  +GA A+A +LK N  +T L L  N IG +GA AL+E+L+ +  +  L L    I
Sbjct: 101 NNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSI 160

Query: 484 GASGAEFVADMLRYNNTISILDLRANGL 511
           G  GA  +A+ML++N T++ LDL  N +
Sbjct: 161 GPEGAVALAEMLKHNTTLTALDLDNNSI 188



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 1/194 (0%)

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           +GVK     + +N     + L    L D GA+A+AE LK+N+ L  L+L  N I   G  
Sbjct: 23  DGVKNKIRAIANNTCPGGIDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAV 82

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LAE L  N+T++ L+LN N  G  GA ALA+ L+ N ++  L L  NSIGDEG  AL  
Sbjct: 83  ALAEMLKHNTTLKILNLNNNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAE 142

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      + +L +  NSI  +GA  +AE +K+  +L  ++L  N I   G   +  AL 
Sbjct: 143 MLE-HNTTMTLLALSENSIGPEGAVALAEMLKHNTTLTALDLDNNSITPVGGAALGAALD 201

Query: 413 QNRTITTIDLGGNN 426
           QNRT+  + +  N+
Sbjct: 202 QNRTLEELCIEKNS 215



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 1/173 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L G  +GD G RA+   L      L  LD+  NSI  +GA  +AE +K+  +L  +NL  
Sbjct: 43  LGGYGLGDIGARAVAEALKDNTC-LETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNN 101

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGDEGA  +A+ LK N T+T + L  N+I  +GA A+A +L+ N+ +T L L+ N IG
Sbjct: 102 NSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIG 161

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            +GA AL+E+LK +  +  L L    I   G   +   L  N T+  L +  N
Sbjct: 162 PEGAVALAEMLKHNTTLTALDLDNNSITPVGGAALGAALDQNRTLEELCIEKN 214



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 100/196 (51%), Gaps = 35/196 (17%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           IDLGG  +   GA A+A  LKDN+ + +LDLA N IG +GA AL+E+LK +  +  L L 
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLN 100

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
              IG  GA  +A+ML++N T++ L L  N + DE                         
Sbjct: 101 NNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDE------------------------- 135

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                  GA  LA+  +  N  +T + L+ N I  +GA A+A+ LK N    +T+L+L N
Sbjct: 136 -------GAVALAEMLE-HNTTMTLLALSENSIGPEGAVALAEMLKHN--TTLTALDLDN 185

Query: 600 NFLTKFGQSALTDAKD 615
           N +T  G +AL  A D
Sbjct: 186 NSITPVGGAALGAALD 201



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 7/172 (4%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K+     ++D++  + GDEG   LAE L +N T + ++   N I   G  A   +L+
Sbjct: 58  EALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNNNSIGDEGAVALAEMLK 117

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N+ +  L L  N IGDEG   L ++L  N  +  L LS   +  EGA A+AE+LK+N+ 
Sbjct: 118 HNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIGPEGAVALAEMLKHNTT 177

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-------YGGALGAN 320
           L  L+L+NN I   G  +L  AL +N T+  L +  N       +G AL  +
Sbjct: 178 LTALDLDNNSITPVGGAALGAALDQNRTLEELCIEKNSTATARAFGAALPVD 229



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 33/189 (17%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD GA  +A+ALK N  + T+DL  N+I  +GA A+A +LK N+ +  L+L  N IG +
Sbjct: 48  LGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNNNSIGDE 107

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA AL+E+LK +  +  L+L    IG  GA  +A+ML +N T+++L L  N +  E    
Sbjct: 108 GAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIGPE---- 163

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                       GA  LA+  K  N  LT++DL  N I   G  
Sbjct: 164 ----------------------------GAVALAEMLK-HNTTLTALDLDNNSITPVGGA 194

Query: 579 AIAQALKAN 587
           A+  AL  N
Sbjct: 195 ALGAALDQN 203


>gi|355693464|gb|EHH28067.1| hypothetical protein EGK_18408 [Macaca mulatta]
 gi|355778755|gb|EHH63791.1| hypothetical protein EGM_16831 [Macaca fascicularis]
          Length = 488

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I +L L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+EGA  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 SMDGA 347



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E++   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N +G +GA AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 332 LRVLKLFLNPI 342



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D ++E A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N +G
Sbjct: 228 NQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+G N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEGAVALGEVLRLNSC-LVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  +GA  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 SMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 35/299 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 229 QFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N+ +  LD+  N + +E                               
Sbjct: 289 EGAVALGEVLRLNSCLVYLDVGGNDIGNE------------------------------- 317

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            GA  +++  +  NE+L  + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 318 -GASKISKGLES-NESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 ESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +   G  +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 39/238 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N  +T ++L  N I  +G  +
Sbjct: 94  GVVPVSYFIRNMEES-YVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 152

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +  +L++N  +  ++++ N +G +GA+ +S+  +                          
Sbjct: 153 LVEMLQENYYLQEMNISNNHLGLEGARIISDFFE-------------------------- 186

Query: 495 LRYNNTISILDLRANGLRDEVCSG-CNGLSF-FHSAIYSLKHMLFYSLCINYLQGAKCLA 552
            R +++I  L+L  N  ++E  +  C  LS  +      L H  F  +      G + L 
Sbjct: 187 -RNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDI------GGEQLG 239

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           Q    +N  LTS+DL++N     GA A+   L+ N  V +T L+L+ N L   G  AL
Sbjct: 240 QML-AINVGLTSLDLSWNNFHTRGAVALCNGLRGN--VTLTKLDLSMNGLGNEGAVAL 294


>gi|145534580|ref|XP_001453034.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420734|emb|CAK85637.1| unnamed protein product [Paramecium tetraurelia]
          Length = 399

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 149/299 (49%), Gaps = 13/299 (4%)

Query: 176 DEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           D+ L  L   L  Y +  + +  + N IT  G++     L    +L++LNL  N IG EG
Sbjct: 58  DQDLILLLSCLQNYKENIQHIDLSFNEITNVGVQELSKFLSGCNSLESLNLQSNKIGVEG 117

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            + + + + D   +  L L+  +L+ +GA +I E+L NN  +  L L NN ID+ G  ++
Sbjct: 118 GELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNKSIVELNLANNGIDHDGVIAI 177

Query: 295 AEAL-LENSTIRSLHLNGNYGGALG---ANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L  +N+T++ L+L+     ++G   A    K    N+ L ++ L  ++   + I  +
Sbjct: 178 TSILNWKNNTLQILNLDNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYII 237

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNC--KSLLWINLYMNDIGDEGAEK 406
              L     KL VLD+  N IS KG   +A+Y+  + C  +SL+   L  N  G  GA+ 
Sbjct: 238 TEHL-LENNKLRVLDLTANRISFKGCEAIAKYLCGEYCVLESLI---LTSNRTGHYGAKA 293

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           I+ AL +NRT+  +D+  N+I   G   IA  L+ N ++ SL L  N  G    +A  +
Sbjct: 294 ISQALSKNRTLIHLDMVRNDIDDNGLKMIAESLETNDMLVSLKLYQNHFGQMALQAFHK 352



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 41/299 (13%)

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+ +  L+S L + K  +  +D+  N I+  G   +++++  C SL  +NL  N IG EG
Sbjct: 58  DQDLILLLSCLQNYKENIQHIDLSFNEITNVGVQELSKFLSGCNSLESLNLQSNKIGVEG 117

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            E IA+ +K  +T+T ++L  NN+ +KGA +I  +L +N  I  L+LA N I  DG  A+
Sbjct: 118 GELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNKSIVELNLANNGIDHDGVIAI 177

Query: 464 SEVLK------------------------------FHGN--INTLKLGWCQIGASGAEFV 491
           + +L                               FH N  +  + L            +
Sbjct: 178 TSILNWKNNTLQILNLDNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYII 237

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
            + L  NN + +LDL AN +      GC  ++ +    Y +   L  +       GAK +
Sbjct: 238 TEHLLENNKLRVLDLTANRIS---FKGCEAIAKYLCGEYCVLESLILTSNRTGHYGAKAI 294

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           +Q+    N  L  +D+  N+I D+G   IA++L+ N+   + SL L  N    FGQ AL
Sbjct: 295 SQALS-KNRTLIHLDMVRNDIDDNGLKMIAESLETND--MLVSLKLYQN---HFGQMAL 347



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 33/238 (13%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L++F     +  S+++     G EG   +AE +   QT   ++   N +   G  +  
Sbjct: 91  QELSKFLSGCNSLESLNLQSNKIGVEGGELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIV 150

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-----------VDNA-------------- 246
            +L +N ++  LNL+ N I  +GV  +  IL           +DN               
Sbjct: 151 EMLFNNKSIVELNLANNGIDHDGVIAITSILNWKNNTLQILNLDNPVYHSIGQETAIHFG 210

Query: 247 -------GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
                  G+E++ L   +   +    I E L  N+ LRVL+L  N I + G  ++A+ L 
Sbjct: 211 KMFHSNRGLEKISLQKHNFTCDAIYIITEHLLENNKLRVLDLTANRISFKGCEAIAKYLC 270

Query: 300 -ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            E   + SL L  N  G  GA A+++ L  N++L  L +  N I D G++ +   L +
Sbjct: 271 GEYCVLESLILTSNRTGHYGAKAISQALSKNRTLIHLDMVRNDIDDNGLKMIAESLET 328


>gi|297298317|ref|XP_002805175.1| PREDICTED: uncharacterized protein C14orf166B-like [Macaca mulatta]
          Length = 488

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I +L L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+EGA  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 SMDGA 347



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E++   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N +G +GA AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 332 LRVLKLFLNPI 342



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D ++E A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N +G
Sbjct: 228 NQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+G N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEGAVALGEVLRLNSC-LVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  +GA  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 SMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 35/299 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 229 QFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N+ +  LD+  N + +E                               
Sbjct: 289 EGAVALGEVLRLNSCLVYLDVGGNDIGNE------------------------------- 317

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            GA  +++  +  NE+L  + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 318 -GASKISKGLES-NESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 ESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +   G  +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 39/238 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N  +T ++L  N I  +G  +
Sbjct: 94  GVVPVSYFIRNMEES-YVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 152

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +  +L++N  +  ++++ N +G +GA+ +S+  +                          
Sbjct: 153 LVEMLQENYYLQEMNISNNHLGLEGARIISDFFE-------------------------- 186

Query: 495 LRYNNTISILDLRANGLRDEVCSG-CNGLSF-FHSAIYSLKHMLFYSLCINYLQGAKCLA 552
            R +++I  L+L  N  ++E  +  C  LS  +      L H  F  +      G + L 
Sbjct: 187 -RNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDI------GGEQLG 239

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           Q    +N  LTS+DL++N     GA A+   L+ N  V +T L+L+ N L   G  AL
Sbjct: 240 QML-AINVGLTSLDLSWNNFHTRGAVALCNGLRGN--VTLTKLDLSMNGLGNEGAVAL 294


>gi|444730156|gb|ELW70547.1| NACHT, LRR and PYD domains-containing protein 12 [Tupaia chinensis]
          Length = 408

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 163/361 (45%), Gaps = 10/361 (2%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +  + ++       D G+  L E L   N   + +      I+ A   A   VL +N  L
Sbjct: 29  QYLTDLEFVKNTLEDSGMKLLCEGLKQPNCILQALRLYRCLISPASCGALAAVLSTNQWL 88

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEG---AKAIAELLKNNSIL 276
             L  S   +    +K LC+ L D N  +++L+L +  L +      K +A +L  N  L
Sbjct: 89  TELEFSETKLEASALKLLCEGLKDPNCKLQKLKLCASLLPENSEAVCKYLASVLICNPHL 148

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
             L+L+ N +   G   L E L   N  +  L L+  Y        L+  L+ +++L+EL
Sbjct: 149 TELDLSENPLGDIGVKYLCEGLRHSNCKLEKLDLSTCYLTQASCVELSSFLQVSQTLKEL 208

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            +  N++GD G++ L  GL   KG +  L +   S+SA     +A+ + + +SL  + L 
Sbjct: 209 FVFANALGDTGVQHLCEGLQHAKGIIENLVLSECSLSAACCEPLAQVLSSTQSLTRLLLI 268

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA--IARVLKDNSVITSLDLAYN 453
            N IGD G + + + LKQ       DL     H  GA    +   L  N  +  LDL+ N
Sbjct: 269 NNKIGDLGLKLLCEGLKQ-PDCQLKDLALWTCHLTGACCQDLCNALYTNEHLRDLDLSDN 327

Query: 454 PIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            +G  G + L E LK     + TL L  C +  +    +A +L  N+ +++LDL  N L+
Sbjct: 328 ALGDKGMQVLCEGLKHPCCKLQTLWLAECHLTDACCGALASVLNRNDNLTLLDLSGNDLK 387

Query: 513 D 513
           D
Sbjct: 388 D 388



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 173/419 (41%), Gaps = 41/419 (9%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRD 260
           +TA+  +    V ++N  L  L    N + D G+K LC+ L   N  ++ L+L    +  
Sbjct: 13  LTASCGRDLSLVFETNQYLTDLEFVKNTLEDSGMKLLCEGLKQPNCILQALRLYRCLISP 72

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNY---GGA 316
               A+A +L  N  L  LE +   ++ S    L E L + N  ++ L L  +       
Sbjct: 73  ASCGALAAVLSTNQWLTELEFSETKLEASALKLLCEGLKDPNCKLQKLKLCASLLPENSE 132

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                LA  L  N  L EL L  N +GD G++ L  GL     KL  LD+    ++    
Sbjct: 133 AVCKYLASVLICNPHLTELDLSENPLGDIGVKYLCEGLRHSNCKLEKLDLSTCYLTQASC 192

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAI 435
             ++ +++  ++L  + ++ N +GD G + + + L+  +  I  + L   ++ +     +
Sbjct: 193 VELSSFLQVSQTLKELFVFANALGDTGVQHLCEGLQHAKGIIENLVLSECSLSAACCEPL 252

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADM 494
           A+VL     +T L L  N IG  G K L E LK     +  L L  C +  +  + + + 
Sbjct: 253 AQVLSSTQSLTRLLLINNKIGDLGLKLLCEGLKQPDCQLKDLALWTCHLTGACCQDLCNA 312

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L  N  +  LDL  N L D                                +G + L + 
Sbjct: 313 LYTNEHLRDLDLSDNALGD--------------------------------KGMQVLCEG 340

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            K     L ++ LA   + D    A+A  L  N++  +T L+L+ N L  FG   L DA
Sbjct: 341 LKHPCCKLQTLWLAECHLTDACCGALASVLNRNDN--LTLLDLSGNDLKDFGVQMLCDA 397



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 13/256 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +D+S    GD G+ +L E L + N   E++  +   +T A        LQ +  LK 
Sbjct: 148 LTELDLSENPLGDIGVKYLCEGLRHSNCKLEKLDLSTCYLTQASCVELSSFLQVSQTLKE 207

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L +  N +GD GV+ LC+ L    G+ E L LS   L     + +A++L +   L  L L
Sbjct: 208 LFVFANALGDTGVQHLCEGLQHAKGIIENLVLSECSLSAACCEPLAQVLSSTQSLTRLLL 267

Query: 282 NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            NN I   G   L E L      L++  + + HL G          L   L  N+ LR+L
Sbjct: 268 INNKIGDLGLKLLCEGLKQPDCQLKDLALWTCHLTGAC-----CQDLCNALYTNEHLRDL 322

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N++GD+G++ L  GL     KL  L +    ++      +A  +    +L  ++L 
Sbjct: 323 DLSDNALGDKGMQVLCEGLKHPCCKLQTLWLAECHLTDACCGALASVLNRNDNLTLLDLS 382

Query: 396 MNDIGDEGAEKIADAL 411
            ND+ D G + + DAL
Sbjct: 383 GNDLKDFGVQMLCDAL 398



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D+S    GD+G+  L E L +     + +  A   +T A   A   VL  N  L  L+L
Sbjct: 322 LDLSDNALGDKGMQVLCEGLKHPCCKLQTLWLAECHLTDACCGALASVLNRNDNLTLLDL 381

Query: 226 SGNPIGDEGVKCLCDILV 243
           SGN + D GV+ LCD L+
Sbjct: 382 SGNDLKDFGVQMLCDALI 399


>gi|402876803|ref|XP_003902143.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Papio anubis]
          Length = 488

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I +L L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+EGA  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 SMDGA 347



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E++   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N +G +GA AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 332 LRVLKLFLNPI 342



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D ++E A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N +G
Sbjct: 228 NQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+G N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEGAVALGEVLRLNSC-LVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  +GA  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 SMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 35/299 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 229 QFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N+ +  LD+  N + +E                               
Sbjct: 289 EGAVALGEVLRLNSCLVYLDVGGNDIGNE------------------------------- 317

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            GA  +++  +  NE+L  + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 318 -GASKISKGLES-NESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 ESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +   G  +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 39/238 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N  +T ++L  N I  +G  +
Sbjct: 94  GVVPVSYFIRNMEES-YVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 152

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +  +L++N  +  ++++ N +G +GA+ +S+  +                          
Sbjct: 153 LVEMLQENYYLQEMNISNNHLGLEGARIISDFFE-------------------------- 186

Query: 495 LRYNNTISILDLRANGLRDEVCSG-CNGLSF-FHSAIYSLKHMLFYSLCINYLQGAKCLA 552
            R +++I  L+L  N  ++E  +  C  LS  +      L H  F  +      G + L 
Sbjct: 187 -RNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDI------GGEQLG 239

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           Q    +N  LTS+DL++N     GA A+   L+ N  V +T L+L+ N L   G  AL
Sbjct: 240 QML-AINVGLTSLDLSWNNFHTRGAVALCNGLRGN--VTLTKLDLSMNGLGNEGAVAL 294


>gi|224108087|ref|XP_002314715.1| predicted protein [Populus trichocarpa]
 gi|222863755|gb|EEF00886.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 1/270 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L L  N I +E  + +C+++     +  LQ  +    
Sbjct: 225 NALGEKGVRAFGALLRSQSCLEELYLMNNGISEEAAEAVCELIPLTEKLRVLQFHNNMTG 284

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D+GA AI++++K + +L     ++  +   G  +L+EAL   + ++ L L  N  G    
Sbjct: 285 DKGALAISKVVKRSPLLEDFRCSSTRVGSEGGVALSEALDTCTHLKKLDLRDNMFGVEAG 344

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L     L E++L   ++ DEG  A+   L      L VLDI  N I+A+ A  V
Sbjct: 345 VALSKALSKYAGLTEVYLSYLNLEDEGAMAIARALKESAPSLEVLDIAGNDITAEAAPIV 404

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           A  I   + L  +NL  N++ DEGA +I+  L++    +  +D+  N+I   GA  +ARV
Sbjct: 405 AACIAEKQHLTKLNLAENELKDEGAIQISKVLEEGHLQLKEVDMSINSIRRAGARVLARV 464

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +        L++  N I  +G   + E+ +
Sbjct: 465 VVQKPEFKFLNIDGNFISDEGIDEVKEMFE 494



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 142/308 (46%), Gaps = 22/308 (7%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+  L+ L+L  N++G++G+RA  + L S+   L  L + NN IS + A  V
Sbjct: 206 NIFSTALEGS-ILKSLNLSNNALGEKGVRAFGALLRSQSC-LEELYLMNNGISEEAAEAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I   + L  +  + N  GD+GA  I+  +K++  +         + S+G  A++  L
Sbjct: 264 CELIPLTEKLRVLQFHNNMTGDKGALAISKVVKRSPLLEDFRCSSTRVGSEGGVALSEAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+ L  +  +  + L +  +   GA  +A  L+ + 
Sbjct: 324 DTCTHLKKLDLRDNMFGVEAGVALSKALSKYAGLTEVYLSYLNLEDEGAMAIARALKESA 383

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            ++ +LD+  N +  E            + I   +H+   +L  N L+    + Q  KV+
Sbjct: 384 PSLEVLDIAGNDITAEAA------PIVAACIAEKQHLTKLNLAENELKDEGAI-QISKVL 436

Query: 559 NEA---LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
            E    L  +D++ N IR  GA  +A+ +    +     LN+  NF++  G        D
Sbjct: 437 EEGHLQLKEVDMSINSIRRAGARVLARVVVQKPEFKF--LNIDGNFISDEGI-------D 487

Query: 616 LVYEMSEK 623
            V EM EK
Sbjct: 488 EVKEMFEK 495



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 133/307 (43%), Gaps = 32/307 (10%)

Query: 139 LSGF-TGKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+ + +N F+  L      S+++S    G++G+      L      EE+
Sbjct: 189 LSDFIAGRPEAEALEVMNIFSTALEGSILKSLNLSNNALGEKGVRAFGALLRSQSCLEEL 248

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               NGI+    +A   ++     L+ L    N  GD+G   +  ++  +  +E  + SS
Sbjct: 249 YLMNNGISEEAAEAVCELIPLTEKLRVLQFHNNMTGDKGALAISKVVKRSPLLEDFRCSS 308

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMI-------------DYSGFT---------- 292
             +  EG  A++E L   + L+ L+L +NM               Y+G T          
Sbjct: 309 TRVGSEGGVALSEALDTCTHLKKLDLRDNMFGVEAGVALSKALSKYAGLTEVYLSYLNLE 368

Query: 293 -----SLAEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                ++A AL E++ ++  L + GN   A  A  +A  +   + L +L+L  N + DEG
Sbjct: 369 DEGAMAIARALKESAPSLEVLDIAGNDITAEAAPIVAACIAEKQHLTKLNLAENELKDEG 428

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
              +   L     +L  +D+  NSI   GA  +A  +       ++N+  N I DEG ++
Sbjct: 429 AIQISKVLEEGHLQLKEVDMSINSIRRAGARVLARVVVQKPEFKFLNIDGNFISDEGIDE 488

Query: 407 IADALKQ 413
           + +  ++
Sbjct: 489 VKEMFEK 495


>gi|405975327|gb|EKC39901.1| hypothetical protein CGI_10016633 [Crassostrea gigas]
          Length = 592

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 29/284 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N   +E+    +G+ A  +KA    L++N  ++ LNL GN I   G +CLC +L +N  +
Sbjct: 147 NLENKELKLRFHGLGAESVKAISFPLETNTNIEILNLEGNGIDSLGARCLCRVLRENLFL 206

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             + LS   +  EGA +I + LK+N  L  +++  N I                      
Sbjct: 207 TEVVLSENKIGTEGAISICQFLKSNRNLLKVDMTANEI---------------------- 244

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
                 G     + ++ L+GN++L+EL L  N + +   R L  G+     +L +LD+  
Sbjct: 245 ------GDPAGQSFSEVLKGNQTLKELILANNRLEETSARFLREGIQE-NDRLEMLDLSW 297

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N     GA  +AE ++    L      M  +   G+E +  ALK NRT+  +D+  N I 
Sbjct: 298 NHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKALKHNRTLRELDISFNRIP 357

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            +GA+ +A  LK+N V+  L L  NP  ++GA  + E ++ + N
Sbjct: 358 VEGAAFLANGLKENDVLQYLKLGNNPFESEGAMVILEAVEANEN 401



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 3/267 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G E +  ++  L  N   E ++   NGI + G +    VL+ N+ L  + LS N IG E
Sbjct: 160 LGAESVKAISFPLETNTNIEILNLEGNGIDSLGARCLCRVLRENLFLTEVVLSENKIGTE 219

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   +C  L  N  + ++ +++ ++ D   ++ +E+LK N  L+ L L NN ++ +    
Sbjct: 220 GAISICQFLKSNRNLLKVDMTANEIGDPAGQSFSEVLKGNQTLKELILANNRLEETSARF 279

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           L E + EN  +  L L+ N+    GA A+A+GL+ N  L++       +   G  A+M  
Sbjct: 280 LREGIQENDRLEMLDLSWNHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKA 339

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK- 412
           L   +  L  LDI  N I  +GA  +A  +K    L ++ L  N    EGA  I +A++ 
Sbjct: 340 LKHNR-TLRELDISFNRIPVEGAAFLANGLKENDVLQYLKLGNNPFESEGAMVILEAVEA 398

Query: 413 -QNRTITTIDLGGNNIHSKGASAIARV 438
            +N  I  +D     + ++ A+   R+
Sbjct: 399 NENSAIKYLDFSNMLVKTEFATIEERL 425



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 34/285 (11%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GA    A++  LE N ++  L+L GN I   G R L   L        V+ +  N I  +
Sbjct: 161 GAESVKAISFPLETNTNIEILNLEGNGIDSLGARCLCRVLRENLFLTEVV-LSENKIGTE 219

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  + +++K+ ++LL +++  N+IGD   +  ++ LK N+T+  + L  N +    A  
Sbjct: 220 GAISICQFLKSNRNLLKVDMTANEIGDPAGQSFSEVLKGNQTLKELILANNRLEETSARF 279

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   +++N  +  LDL++N     GA A++E L+ +  +   +     +  +G+E +   
Sbjct: 280 LREGIQENDRLEMLDLSWNHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKA 339

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L++N T+  LD+  N +                                 ++GA  LA  
Sbjct: 340 LKHNRTLRELDISFNRIP--------------------------------VEGAAFLANG 367

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            K  N+ L  + L  N    +GA  I +A++ANE+ A+  L+ +N
Sbjct: 368 LKE-NDVLQYLKLGNNPFESEGAMVILEAVEANENSAIKYLDFSN 411



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 10/283 (3%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K  +L  NP+            V N   + L+L    L  E  KAI+  L+ N+ + +L 
Sbjct: 132 KCFDLGINPVS---------YFVKNLENKELKLRFHGLGAESVKAISFPLETNTNIEILN 182

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N ID  G   L   L EN  +  + L+ N  G  GA ++ + L+ N++L ++ +  N
Sbjct: 183 LEGNGIDSLGARCLCRVLRENLFLTEVVLSENKIGTEGAISICQFLKSNRNLLKVDMTAN 242

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD   ++    L   +  L  L + NN +    A  + E I+    L  ++L  N   
Sbjct: 243 EIGDPAGQSFSEVLKGNQ-TLKELILANNRLEETSARFLREGIQENDRLEMLDLSWNHFK 301

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             GA  IA+ L++N  +         +   G+ A+ + LK N  +  LD+++N I  +GA
Sbjct: 302 TTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKALKHNRTLRELDISFNRIPVEGA 361

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
             L+  LK +  +  LKLG     + GA  + + +  N   +I
Sbjct: 362 AFLANGLKENDVLQYLKLGNNPFESEGAMVILEAVEANENSAI 404



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 1/214 (0%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+ I  L+L GN   +LGA  L + L  N  L E+ L  N IG EG  ++   L S +  
Sbjct: 175 NTNIEILNLEGNGIDSLGARCLCRVLRENLFLTEVVLSENKIGTEGAISICQFLKSNRNL 234

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L V D+  N I        +E +K  ++L  + L  N + +  A  + + +++N  +  +
Sbjct: 235 LKV-DMTANEIGDPAGQSFSEVLKGNQTLKELILANNRLEETSARFLREGIQENDRLEML 293

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           DL  N+  + GA AIA  L++N  +         +   G++A+ + LK +  +  L + +
Sbjct: 294 DLSWNHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKALKHNRTLRELDISF 353

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +I   GA F+A+ L+ N+ +  L L  N    E
Sbjct: 354 NRIPVEGAAFLANGLKENDVLQYLKLGNNPFESE 387



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 84/176 (47%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F K  R    VDM+    GD      +E L  NQT +E+  A N +     +     +Q
Sbjct: 226 QFLKSNRNLLKVDMTANEIGDPAGQSFSEVLKGNQTLKELILANNRLEETSARFLREGIQ 285

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  L+ L+LS N     G   + + L +N G+++ +     L   G++A+ + LK+N  
Sbjct: 286 ENDRLEMLDLSWNHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKALKHNRT 345

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           LR L+++ N I   G   LA  L EN  ++ L L  N   + GA  + + +E N++
Sbjct: 346 LRELDISFNRIPVEGAAFLANGLKENDVLQYLKLGNNPFESEGAMVILEAVEANEN 401



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 2/227 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + V +S    G EG   + + L  N+   +V   AN I     ++F  VL+ N  LK L
Sbjct: 206 LTEVVLSENKIGTEGAISICQFLKSNRNLLKVDMTANEIGDPAGQSFSEVLKGNQTLKEL 265

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L+ N + +   + L + + +N  +E L LS    +  GA AIAE L+ N  L+      
Sbjct: 266 ILANNRLEETSARFLREGIQENDRLEMLDLSWNHFKTTGAVAIAEGLQENVGLKKFRFQM 325

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +  +G  ++ +AL  N T+R L ++ N     GA  LA GL+ N  L+ L L  N   
Sbjct: 326 AGLAKAGSEAMMKALKHNRTLRELDISFNRIPVEGAAFLANGLKENDVLQYLKLGNNPFE 385

Query: 344 DEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            EG   ++  + + +   +  LD  N  +  + A  + E +K  + L
Sbjct: 386 SEGAMVILEAVEANENSAIKYLDFSNMLVKTEFA-TIEERLKEQRKL 431


>gi|281201664|gb|EFA75872.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
           PN500]
          Length = 798

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 198/411 (48%), Gaps = 12/411 (2%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            + + +     N  DE +  + ++L  N T + + F  N +      +  G L  N +L 
Sbjct: 392 HSITHISFRNNNLDDEFVVDIIQALHENNTIQILDFRLNKLGNQTAISLAGALLKNRSLT 451

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            ++L  N IG EG   + + L  N  + +L L    +  + A  ++E LK N+++  + L
Sbjct: 452 CVDLFYNAIGPEGGVAIANSLRTNRTLRKLYLGWNHINGQTASILSESLKVNNVIESIYL 511

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +  + D+SG + LAE+L  N+++  L+L         A AL    + NKSL +L+   N 
Sbjct: 512 DR-IDDHSG-SLLAESLAVNTSVTELNLADCQLKQFTAKALGSAFKVNKSLADLNFRCNQ 569

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +G + ++ +   LS     L  +++ +N I+ +    +AE +K   S+  ++L +N +G+
Sbjct: 570 LGAD-LKDISQSLSVNH-TLTRINLSDNRINDESGRLLAESLKTNHSITSLSLSLNQLGN 627

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           + A+++  AL +N T+  +DL  N I   GA  IA  L  NS +  L+L  N + +    
Sbjct: 628 KFADEMGVALLENTTLKLLDLSNNQIEFTGAQHIANALASNSTLKLLNLCQNSLSSKFGP 687

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
            ++  L  + ++  L+L +  IG++GA  +A  ++ N  +  L+L  N + D+      G
Sbjct: 688 LIAYSLTQNKSLTHLELAYVGIGSAGAVSLAKAVKDNIHLRKLNLSENQIGDD------G 741

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
              F  AI S  +   Y L ++Y      + + F+ + E   ++  + + +
Sbjct: 742 ALAFADAIKS--NQFLYVLDLSYNNFTYRVKEVFEKIQEQNNTLQFSISSV 790



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 182/397 (45%), Gaps = 32/397 (8%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +  +  + +   L  N  +  +   + +L DE    I + L  N+ +++L+   N +   
Sbjct: 376 VSPDNFEAIGHALRTNHSITHISFRNNNLDDEFVVDIIQALHENNTIQILDFRLNKLGNQ 435

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
              SLA ALL+N ++  + L  N  G  G  A+A  L  N++LR+L+L  N I  +    
Sbjct: 436 TAISLAGALLKNRSLTCVDLFYNAIGPEGGVAIANSLRTNRTLRKLYLGWNHINGQTASI 495

Query: 350 LMSGL-------------------SSRKGKLAV------LDIGNNSISAKGAFHVAEYIK 384
           L   L                   S     LAV      L++ +  +    A  +    K
Sbjct: 496 LSESLKVNNVIESIYLDRIDDHSGSLLAESLAVNTSVTELNLADCQLKQFTAKALGSAFK 555

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             KSL  +N   N +G +  + I+ +L  N T+T I+L  N I+ +    +A  LK N  
Sbjct: 556 VNKSLADLNFRCNQLGAD-LKDISQSLSVNHTLTRINLSDNRINDESGRLLAESLKTNHS 614

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           ITSL L+ N +G   A  +   L  +  +  L L   QI  +GA+ +A+ L  N+T+ +L
Sbjct: 615 ITSLSLSLNQLGNKFADEMGVALLENTTLKLLDLSNNQIEFTGAQHIANALASNSTLKLL 674

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
           +L  N L  +       +++  +   SL H+    + I    GA  LA++ K  N  L  
Sbjct: 675 NLCQNSLSSKFGP---LIAYSLTQNKSLTHLELAYVGIGS-AGAVSLAKAVK-DNIHLRK 729

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
           ++L+ N+I DDGA A A A+K+N+ + V  L+  NNF
Sbjct: 730 LNLSENQIGDDGALAFADAIKSNQFLYVLDLSY-NNF 765



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 25/271 (9%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +   ++   S+  I+   N++ DE    I  AL +N TI  +D   N + ++ A ++A  
Sbjct: 384 IGHALRTNHSITHISFRNNNLDDEFVVDIIQALHENNTIQILDFRLNKLGNQTAISLAGA 443

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N  +T +DL YN IG +G  A++  L+ +  +  L LGW  I    A  +++ L+ N
Sbjct: 444 LLKNRSLTCVDLFYNAIGPEGGVAIANSLRTNRTLRKLYLGWNHINGQTASILSESLKVN 503

Query: 499 NTI-SI----LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL------------- 540
           N I SI    +D  +  L  E  +    ++  + A   LK     +L             
Sbjct: 504 NVIESIYLDRIDDHSGSLLAESLAVNTSVTELNLADCQLKQFTAKALGSAFKVNKSLADL 563

Query: 541 ---CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN- 596
              C       K ++QS   VN  LT I+L+ N I D+    +A++LK N  +   SL+ 
Sbjct: 564 NFRCNQLGADLKDISQSLS-VNHTLTRINLSDNRINDESGRLLAESLKTNHSITSLSLSL 622

Query: 597 --LANNFLTKFGQSALTDAKDLVYEMSEKEV 625
             L N F  + G + L +    + ++S  ++
Sbjct: 623 NQLGNKFADEMGVALLENTTLKLLDLSNNQI 653


>gi|255559446|ref|XP_002520743.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223540128|gb|EEF41705.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 136/275 (49%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     ++ LQ  
Sbjct: 220 LNLSNNALGEKGVRAFGALLKSQNNLEELYLINDGISEEAARAVCELVPSTEKLKVLQFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE +K +++L     ++  I   G  +LAEAL   + +R L L  N  
Sbjct: 280 NNMTGDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLRKLDLRDNMF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L E++L   ++ DEG  AL   L      L VLD+  N  +AK
Sbjct: 340 GVEAGVALSKALFSFADLTEVYLSYLNLEDEGAEALADALKESAPSLEVLDMAGNDFTAK 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGAS 433
            A  +A  I   + L  +NL  N++ DEGA  IA A++     +  +DLG N I   GA 
Sbjct: 400 AASSLAPCIAAKQFLSKLNLAENELKDEGAILIAKAIEGGHGQLNEVDLGTNQIRRAGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +A+ +        L++  N I  +G   + ++ K
Sbjct: 460 LLAQAVVLKPGFKLLNINGNFISDEGIDEVKDIFK 494



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 13/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG  +LR L+L  N++G++G+RA  + L S +  L  L + N+ IS + A  V
Sbjct: 206 NIFSTALEGC-NLRCLNLSNNALGEKGVRAFGALLKS-QNNLEELYLINDGISEEAARAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  +  + N  GDEGA  IA+ +K++  +         I   G  A+A  L
Sbjct: 264 CELVPSTEKLKVLQFHNNMTGDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+ L    ++  + L +  +   GAE +AD L+ + 
Sbjct: 324 GTCTHLRKLDLRDNMFGVEAGVALSKALFSFADLTEVYLSYLNLEDEGAEALADALKESA 383

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++ +LD+  N    +  S           I + + +   +L  N L  +GA  +A++ +
Sbjct: 384 PSLEVLDMAGNDFTAKAASS------LAPCIAAKQFLSKLNLAENELKDEGAILIAKAIE 437

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +DL  N+IR  GA  +AQA+       +  LN+  NF++  G   + D
Sbjct: 438 GGHGQLNEVDLGTNQIRRAGARLLAQAVVLKPGFKL--LNINGNFISDEGIDEVKD 491



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 30/221 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  I   G  A    L +   L+ L+L  N  G E 
Sbjct: 284 GDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLRKLDLRDNMFGVEA 343

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L   A +  + LS ++L DEGA+A+A+ LK ++  L VL++  N       +S
Sbjct: 344 GVALSKALFSFADLTEVYLSYLNLEDEGAEALADALKESAPSLEVLDMAGNDFTAKAASS 403

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEG------------------------- 328
           LA  +     +  L+L  N     GA  +AK +EG                         
Sbjct: 404 LAPCIAAKQFLSKLNLAENELKDEGAILIAKAIEGGHGQLNEVDLGTNQIRRAGARLLAQ 463

Query: 329 ----NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
                   + L+++GN I DEGI  +     +  G L  LD
Sbjct: 464 AVVLKPGFKLLNINGNFISDEGIDEVKDIFKNLPGVLGPLD 504


>gi|225436920|ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 isoform 2 [Vitis
           vinifera]
 gi|225436922|ref|XP_002274973.1| PREDICTED: RAN GTPase-activating protein 1 isoform 1 [Vitis
           vinifera]
          Length = 541

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 141/275 (51%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     +  LQ  
Sbjct: 220 LNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRILQFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AI+E++K +  L     ++  +D  G  +LA+AL   + ++ L L  N  
Sbjct: 280 NNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRDNMF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L   K L E++L   ++ DEG +A+ + L      L VL++  N I+ +
Sbjct: 340 GVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLEMAGNDITVE 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGAS 433
            A  +A  I   + L  ++L  N++ DEGA  I+ AL++ +  +T +DL  N+I   GA 
Sbjct: 400 AASTLAACIAAKQCLAKLSLAENELKDEGAILISKALEEGHNQLTEVDLNTNSIRRAGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +A+ +        L++  N I  +G   + ++ K
Sbjct: 460 FLAQTVASKPGFKLLNINGNFISDEGIDEVKDIFK 494



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 146/296 (49%), Gaps = 13/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   L+ L+L  N++G++G+RA  + L S +  L  L + N+ IS + A  V
Sbjct: 206 NIFSSALEGC-VLKYLNLSNNALGEKGVRAFGALLKS-QNNLEELYLMNDGISEEAARAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I + + L  +  + N  GDEGA  I++ +K++  +         + S+G  A+A+ L
Sbjct: 264 CELIPSTEKLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              + +  LDL  N  G +   ALS+ L    ++  + L +  +   GA+ +A+ L+ + 
Sbjct: 324 GTCTRLKKLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKEST 383

Query: 500 -TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++ +L++  N +  E  S         + I + + +   SL  N L  +GA  ++++ +
Sbjct: 384 PSLEVLEMAGNDITVEAAST------LAACIAAKQCLAKLSLAENELKDEGAILISKALE 437

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  LT +DL  N IR  GA  +AQ + +     +  LN+  NF++  G   + D
Sbjct: 438 EGHNQLTEVDLNTNSIRRAGARFLAQTVASKPGFKL--LNINGNFISDEGIDEVKD 491


>gi|320166990|gb|EFW43889.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 625

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 1/183 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++ EL L GN I D G RA+   + +    L V+D+  N I   GA  +AE +K  K+
Sbjct: 47  NTTMTELDLSGNLIADVGARAIAEAVRA-NCTLTVVDLTENRIGDAGARAIAETLKVNKT 105

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L+ ++L  N IG  GA+ IAD LK N+T+  + L  N I   GA AIA  LK N+ +T L
Sbjct: 106 LIDLDLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTEL 165

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L  N I   GA+AL+EVLK +  +  L +G  QIG +GA  +A+ L+ N T++ LDL  
Sbjct: 166 YLWENQITCTGAQALAEVLKANTTLTELDMGSNQIGDAGARAIAEALKVNETLTELDLNE 225

Query: 509 NGL 511
           N L
Sbjct: 226 NFL 228



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 122/241 (50%), Gaps = 29/241 (12%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A + L+L    IG+   K + + +  N  +  L LS   + D GA+AIAE ++ N  L V
Sbjct: 21  ASQQLDLCKQQIGNAEAKAIAEAIKVNTTMTELDLSGNLIADVGARAIAEAVRANCTLTV 80

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++L  N I  +G  ++AE L  N T+  L LN N  GA GA A+A GL+ NK+L EL L 
Sbjct: 81  VDLTENRIGDAGARAIAETLKVNKTLIDLDLNDNQIGAAGAQAIADGLKVNKTLIELSLA 140

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD+G +A                             +A+ +K   +L  + L+ N 
Sbjct: 141 KNPIGDDGAQA-----------------------------IADALKVNTTLTELYLWENQ 171

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I   GA+ +A+ LK N T+T +D+G N I   GA AIA  LK N  +T LDL  N +  D
Sbjct: 172 ITCTGAQALAEVLKANTTLTELDMGSNQIGDAGARAIAEALKVNETLTELDLNENFLTTD 231

Query: 459 G 459
           G
Sbjct: 232 G 232



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 118/228 (51%), Gaps = 35/228 (15%)

Query: 364 LDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           LD+  N I+  GA  +AE ++ NC +L  ++L  N IGD GA  IA+ LK N+T+  +DL
Sbjct: 53  LDLSGNLIADVGARAIAEAVRANC-TLTVVDLTENRIGDAGARAIAETLKVNKTLIDLDL 111

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I + GA AIA  LK N  +  L LA NPIG DGA+A+++ LK +  +  L L   Q
Sbjct: 112 NDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWENQ 171

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           I  +GA+ +A++L+ N T++ LD+ +N + D                             
Sbjct: 172 ITCTGAQALAEVLKANTTLTELDMGSNQIGD----------------------------- 202

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
               GA+ +A++ K VNE LT +DL  N +  DG     Q   A  DV
Sbjct: 203 ---AGARAIAEALK-VNETLTELDLNENFLTTDGIATFRQTGNAICDV 246



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 121/215 (56%), Gaps = 7/215 (3%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L    IG+  A+ IA+A+K N T+T +DL GN I   GA AIA  ++ N  +T +DL 
Sbjct: 25  LDLCKQQIGNAEAKAIAEAIKVNTTMTELDLSGNLIADVGARAIAEAVRANCTLTVVDLT 84

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+A++E LK +  +  L L   QIGA+GA+ +AD L+ N T+  L L  N +
Sbjct: 85  ENRIGDAGARAIAETLKVNKTLIDLDLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPI 144

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            D+   G   ++       +L  +  +   I    GA+ LA+  K  N  LT +D+  N+
Sbjct: 145 GDD---GAQAIADALKVNTTLTELYLWENQIT-CTGAQALAEVLK-ANTTLTELDMGSNQ 199

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           I D GA AIA+ALK NE   +T L+L  NFLT  G
Sbjct: 200 IGDAGARAIAEALKVNE--TLTELDLNENFLTTDG 232



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 98/184 (53%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+SG    D G   +AE++  N T   V    N I  AG +A    L+ N  L  L
Sbjct: 50  MTELDLSGNLIADVGARAIAEAVRANCTLTVVDLTENRIGDAGARAIAETLKVNKTLIDL 109

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IG  G + + D L  N  +  L L+   + D+GA+AIA+ LK N+ L  L L  
Sbjct: 110 DLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWE 169

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  +LAE L  N+T+  L +  N  G  GA A+A+ L+ N++L EL L+ N + 
Sbjct: 170 NQITCTGAQALAEVLKANTTLTELDMGSNQIGDAGARAIAEALKVNETLTELDLNENFLT 229

Query: 344 DEGI 347
            +GI
Sbjct: 230 TDGI 233



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 3/227 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E +Q L  F +   A   +D+  +  G+     +AE++  N T  E+  + N I   G +
Sbjct: 9   EKQQQL--FDEVKHASQQLDLCKQQIGNAEAKAIAEAIKVNTTMTELDLSGNLIADVGAR 66

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    +++N  L  ++L+ N IGD G + + + L  N  +  L L+   +   GA+AIA+
Sbjct: 67  AIAEAVRANCTLTVVDLTENRIGDAGARAIAETLKVNKTLIDLDLNDNQIGAAGAQAIAD 126

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  L  L L  N I   G  ++A+AL  N+T+  L+L  N     GA ALA+ L+ 
Sbjct: 127 GLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWENQITCTGAQALAEVLKA 186

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           N +L EL +  N IGD G RA+   L   +  L  LD+  N ++  G
Sbjct: 187 NTTLTELDMGSNQIGDAGARAIAEALKVNE-TLTELDLNENFLTTDG 232



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 54/111 (48%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           + L  N+T  E+S A N I   G +A    L+ N  L  L L  N I   G + L ++L 
Sbjct: 126 DGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWENQITCTGAQALAEVLK 185

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            N  +  L + S  + D GA+AIAE LK N  L  L+LN N +   G  + 
Sbjct: 186 ANTTLTELDMGSNQIGDAGARAIAEALKVNETLTELDLNENFLTTDGIATF 236


>gi|302791555|ref|XP_002977544.1| hypothetical protein SELMODRAFT_31007 [Selaginella moellendorffii]
 gi|300154914|gb|EFJ21548.1| hypothetical protein SELMODRAFT_31007 [Selaginella moellendorffii]
          Length = 521

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L    N I  +  K + + LV  + +  L   +    
Sbjct: 216 NALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVE-LVSGSKLRTLHFHNNMSG 274

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+ IA L++  + L   +L+++ +   G  +LAEAL   S+++ L L  N  G  G 
Sbjct: 275 DLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRDNIFGEEGG 334

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL K       L EL+L    + + G++A++  L +   KL+VLD+GNN IS   A H+
Sbjct: 335 FALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVLDLGNNDISTSCAPHL 394

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARV 438
             +++   +L  ++L  N++ D+G   +++AL+Q +  +  +D   N++ S GA A A+ 
Sbjct: 395 VRFLEKKAALKKLSLAENELKDKGVILVSNALRQGHDDLEELDFTLNDVGSDGAIAAAKA 454

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +        L L  N I A G  ++  VL
Sbjct: 455 VTTKPRFKLLILESNHISAKGLASVRSVL 483



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 131/263 (49%), Gaps = 14/263 (5%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LEG+  LR L+L  N++G++G+RA  S L S+K  L  L   NN IS+  A  + E +  
Sbjct: 203 LEGS-DLRFLYLSNNALGEKGVRAFGSLLKSQK-HLEDLRFENNGISSDAAKAIVELVSG 260

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            K L  ++ + N  GD GAE+IA  ++Q   +    L  + + +KGA A+A  L+  S +
Sbjct: 261 SK-LRTLHFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSL 319

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTISIL 504
             LDL  N  G +G  AL +  +    +  L L    +  +G + V + L      +S+L
Sbjct: 320 KKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVL 379

Query: 505 DLRANGLRDEVCSGC-NGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEA 561
           DL  N    ++ + C   L  F     +LK +   SL  N L  +G   ++ + +  ++ 
Sbjct: 380 DLGNN----DISTSCAPHLVRFLEKKAALKKL---SLAENELKDKGVILVSNALRQGHDD 432

Query: 562 LTSIDLAFNEIRDDGAFAIAQAL 584
           L  +D   N++  DGA A A+A+
Sbjct: 433 LEELDFTLNDVGSDGAIAAAKAV 455



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 5/167 (2%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A+ L+A SS+   D+    FG+EG F L ++       EE+  +  G+  AG++A    
Sbjct: 309 LAEALQACSSLKKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEA 368

Query: 214 LQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           L++    L  L+L  N I       L   L   A +++L L+  +L+D+G   ++  L+ 
Sbjct: 369 LETTAPKLSVLDLGNNDISTSCAPHLVRFLEKKAALKKLSLAENELKDKGVILVSNALRQ 428

Query: 273 -NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            +  L  L+   N +   G  + A+A+      + L L  N+  A G
Sbjct: 429 GHDDLEELDFTLNDVGSDGAIAAAKAVTTKPRFKLLILESNHISAKG 475


>gi|148231251|ref|NP_001088808.1| leucine rich repeat containing 34 [Xenopus laevis]
 gi|124481830|gb|AAI33241.1| LOC496076 protein [Xenopus laevis]
          Length = 415

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 134/249 (53%), Gaps = 15/249 (6%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE   AL   LS +   +  LD+  N+++  GA H+A +++N  SLL +N+  NDIG 
Sbjct: 55  VSDEDFLALTRVLS-KNCFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGT 113

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GAE+I  AL +N ++ ++ + GN I +KG    A +L+ NS +  LDL    +G     
Sbjct: 114 DGAERITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLI 173

Query: 462 ALSEVLKFHGNINTLKLG---WCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCS 517
           AL+ VL  +  + ++ L    +  I       +++MLR N+T+  L L  + + D  V  
Sbjct: 174 ALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQR 233

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
            C+ L   H   Y+LKH+    L  N +   G KCLA+  K  N+ L  +DLA N + DD
Sbjct: 234 LCDAL---HEN-YALKHL---DLSCNKITRDGVKCLAEVLK-RNKTLEILDLASNRMEDD 285

Query: 576 GAFAIAQAL 584
           GA  +A+A+
Sbjct: 286 GAIYLAEAI 294



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 11/259 (4%)

Query: 222 TLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TL L GN        + DE    L  +L  N  +  L L   +L D GA  IA  L+NNS
Sbjct: 40  TLKLCGNNRLVQVQRVSDEDFLALTRVLSKNCFITNLDLRYNNLTDNGAAHIATFLQNNS 99

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L +  N I   G   + +AL  NS++ SL + GN  G  G    A  L+ N SL E
Sbjct: 100 SLLCLNIMGNDIGTDGAERITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEE 159

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLW 391
           L L    +G + + AL + L   K  L  +++       I      H++E ++   +L  
Sbjct: 160 LDLGDCDLGIQSLIALATVLLQNK-TLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQE 218

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  +++ D G +++ DAL +N  +  +DL  N I   G   +A VLK N  +  LDLA
Sbjct: 219 LHLSKHEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLA 278

Query: 452 YNPIGADGAKALSEVLKFH 470
            N +  DGA  L+E +  +
Sbjct: 279 SNRMEDDGAIYLAEAIYLY 297



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 10/313 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+   N  D G   +A  L  N +   ++   N I   G +     L  N +L +L
Sbjct: 73  ITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGTDGAERITKALHRNSSLLSL 132

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            ++GN IG++G      +L  N+ +E L L   DL  +   A+A +L  N  L+ + LN 
Sbjct: 133 RMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNLNR 192

Query: 284 NM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +   I       L+E L  NST++ LHL+ +     G   L   L  N +L+ L L  N
Sbjct: 193 PLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYALKHLDLSCN 252

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMND 398
            I  +G++ L   L  R   L +LD+ +N +   GA ++AE  Y+ N +SL  +++  N+
Sbjct: 253 KITRDGVKCLAEVLK-RNKTLEILDLASNRMEDDGAIYLAEAIYLYN-RSLKALSVVSNN 310

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I  +G + +A A+  N  +  I + GN I  + + A + +LK    ++S      P   D
Sbjct: 311 IRGKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLKSGR-LSSSSTDVQPYVVD 369

Query: 459 GAKALSEVLKFHG 471
           G   L+E+  FHG
Sbjct: 370 GRACLAEL--FHG 380



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)

Query: 145 KLFRESKQTLNEFAKELRA--------FSSVDMSGRN-------FGDEGLFFLAESLGYN 189
           ++  E KQ +N F  E+ +         S++ + G N         DE    L   L  N
Sbjct: 11  EMCSEQKQPVNPFIAEILSQTEEQELYASTLKLCGNNRLVQVQRVSDEDFLALTRVLSKN 70

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
                +    N +T  G       LQ+N +L  LN+ GN IG +G + +   L  N+ + 
Sbjct: 71  CFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGTDGAERITKALHRNSSLL 130

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L+++   + ++G    A +L+ NS L  L+L +  +      +LA  LL+N T++S++L
Sbjct: 131 SLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNL 190

Query: 310 NGNYGGALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           N      +  +    L++ L  N +L+ELHL  + + D G++ L   L      L  LD+
Sbjct: 191 NRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYA-LKHLDL 249

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGN 425
             N I+  G   +AE +K  K+L  ++L  N + D+GA  +A+A+   NR++  + +  N
Sbjct: 250 SCNKITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSN 309

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           NI  KG  A+A  +  N+ +  + +  N I  + + A S +LK
Sbjct: 310 NIRGKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLK 352



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGIT 203
           K+ R+  + L E  K  +    +D++     D+G  +LAE++  YN++ + +S  +N I 
Sbjct: 253 KITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSNNIR 312

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD--- 260
             G+KA    + +N  L  + + GN I +E       +L   +G  RL  SS D++    
Sbjct: 313 GKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLL--KSG--RLSSSSTDVQPYVV 368

Query: 261 EGAKAIAEL 269
           +G   +AEL
Sbjct: 369 DGRACLAEL 377


>gi|147789790|emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]
          Length = 541

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 141/275 (51%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     +  LQ  
Sbjct: 220 LNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRILQFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AI+E++K +  L     ++  +D  G  +LA+AL   + ++ L L  N  
Sbjct: 280 NNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRDNMF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L   K L E++L   ++ DEG +A+ + L      L VL++  N I+ +
Sbjct: 340 GVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLEMAGNDITVE 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGAS 433
            A  +A  I   + L  ++L  N++ DEGA  I+ AL++ +  +T +DL  N+I   GA 
Sbjct: 400 AASTLAACIAAKQCLAKLSLAENELKDEGAILISKALEEGHNQLTEVDLNTNSIRRAGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +A+ +        L++  N I  +G   + ++ K
Sbjct: 460 FLAQTVASKPGFKLLNINGNFISDEGIDEVKDIFK 494



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 146/296 (49%), Gaps = 13/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   L+ L+L  N++G++G+RA  + L S +  L  L + N+ IS + A  V
Sbjct: 206 NIFSSALEGC-VLKYLNLSNNALGEKGVRAFGALLKS-QNNLEELYLMNDGISEEAARAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I + + L  +  + N  GDEGA  I++ +K++  +         + S+G  A+A+ L
Sbjct: 264 CELIPSTEKLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              + +  LDL  N  G +   ALS+ L    ++  + L +  +   GA+ +A+ L+ + 
Sbjct: 324 GTCTRLKKLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKEST 383

Query: 500 -TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++ +L++  N +  E  S         + I + + +   SL  N L  +GA  ++++ +
Sbjct: 384 PSLEVLEMAGNDITVEAAST------LAACIAAKQCLAKLSLAENELKDEGAILISKALE 437

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  LT +DL  N IR  GA  +AQ + +     +  LN+  NF++  G   + D
Sbjct: 438 EGHNQLTEVDLNTNSIRRAGARFLAQTVASKPGFKL--LNINGNFISDEGIDEVKD 491


>gi|440797807|gb|ELR18882.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 822

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 2/221 (0%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           +  L L + D+   GA  +A  LK N  +  L L  NMI + G  SLAEAL  NS + +L
Sbjct: 279 ITTLILDANDIERHGAAMLANFLKTNDHVECLSLKWNMIGFDGAESLAEALKVNSRLTTL 338

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L GN   + GA A+A  L+ N SL +++L  N +G+ G+ A+   L      L  LD+ 
Sbjct: 339 QLEGNGIDSDGAIAIADALKVNTSLTDVNLKENGLGNSGVDAISEALLV-NSTLNCLDLS 397

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N IS  G   +AE +++ + L ++ L  N + D GA  +AD L  N T+T+++L  N+I
Sbjct: 398 SNGISYAGTT-LAESLRSNRGLRYLMLNENALFDAGATALADTLATNSTLTSLELRDNSI 456

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
              G  A+   ++ N+V+  L++  N  G  G  AL ++LK
Sbjct: 457 SEDGILALTDAVQTNTVLVDLNVKLNQPGLRGEIALFKLLK 497



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 57/287 (19%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK-----------------------GK 360
           + L+  + +  + L    IGD+G+  L+  L   K                       G 
Sbjct: 219 QALDDERQISAITLPALGIGDDGLAQLLDRLPPLKPMWSGDDLMLTGGPAPGQITPVVGL 278

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +  L +  N I   GA  +A ++K    +  ++L  N IG +GAE +A+ALK N  +TT+
Sbjct: 279 ITTLILDANDIERHGAAMLANFLKTNDHVECLSLKWNMIGFDGAESLAEALKVNSRLTTL 338

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L GN I S GA AIA  LK N+ +T ++L  N +G  G  A+SE L  +  +N L L  
Sbjct: 339 QLEGNGIDSDGAIAIADALKVNTSLTDVNLKENGLGNSGVDAISEALLVNSTLNCLDLSS 398

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
             I  +G   +A+ LR N  +  L L  N L D                           
Sbjct: 399 NGISYAGTT-LAESLRSNRGLRYLMLNENALFD--------------------------- 430

Query: 541 CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
                 GA  LA +    N  LTS++L  N I +DG  A+  A++ N
Sbjct: 431 -----AGATALADTL-ATNSTLTSLELRDNSISEDGILALTDAVQTN 471



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 8/197 (4%)

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           ITT+ L  N+I   GA+ +A  LK N  +  L L +N IG DGA++L+E LK +  + TL
Sbjct: 279 ITTLILDANDIERHGAAMLANFLKTNDHVECLSLKWNMIGFDGAESLAEALKVNSRLTTL 338

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
           +L    I + GA  +AD L+ N +++ ++L+ NGL +   SG + +S       +L  + 
Sbjct: 339 QLEGNGIDSDGAIAIADALKVNTSLTDVNLKENGLGN---SGVDAISEALLVNSTLNCLD 395

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
             S  I+Y      LA+S +  N  L  + L  N + D GA A+A  L  N    +TSL 
Sbjct: 396 LSSNGISY--AGTTLAESLRS-NRGLRYLMLNENALFDAGATALADTLATNS--TLTSLE 450

Query: 597 LANNFLTKFGQSALTDA 613
           L +N +++ G  ALTDA
Sbjct: 451 LRDNSISEDGILALTDA 467



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 1/184 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G +G   LAE+L  N     +    NGI + G  A    L+ N +L  +NL  N +G+ 
Sbjct: 317 IGFDGAESLAEALKVNSRLTTLQLEGNGIDSDGAIAIADALKVNTSLTDVNLKENGLGNS 376

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           GV  + + L+ N+ +  L LSS  +   G   +AE L++N  LR L LN N +  +G T+
Sbjct: 377 GVDAISEALLVNSTLNCLDLSSNGISYAGT-TLAESLRSNRGLRYLMLNENALFDAGATA 435

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+ L  NST+ SL L  N     G  AL   ++ N  L +L++  N  G  G  AL   
Sbjct: 436 LADTLATNSTLTSLELRDNSISEDGILALTDAVQTNTVLVDLNVKLNQPGLRGEIALFKL 495

Query: 354 LSSR 357
           L SR
Sbjct: 496 LKSR 499



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 86/210 (40%), Gaps = 41/210 (19%)

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKG-ASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           E    AL   R I+ I L    I   G A  + R+     + +  DL        G  A 
Sbjct: 215 ESYLQALDDERQISAITLPALGIGDDGLAQLLDRLPPLKPMWSGDDLMLT-----GGPAP 269

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
            ++    G I TL L    I   GA  +A+ L+ N+ +  L L+ N              
Sbjct: 270 GQITPVVGLITTLILDANDIERHGAAMLANFLKTNDHVECLSLKWN-------------- 315

Query: 524 FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
                      M+ +        GA+ LA++ KV N  LT++ L  N I  DGA AIA A
Sbjct: 316 -----------MIGFD-------GAESLAEALKV-NSRLTTLQLEGNGIDSDGAIAIADA 356

Query: 584 LKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           LK N   ++T +NL  N L   G  A+++A
Sbjct: 357 LKVN--TSLTDVNLKENGLGNSGVDAISEA 384


>gi|434403643|ref|YP_007146528.1| hypothetical protein Cylst_1568 [Cylindrospermum stagnale PCC 7417]
 gi|428257898|gb|AFZ23848.1| hypothetical protein Cylst_1568 [Cylindrospermum stagnale PCC 7417]
          Length = 388

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 166/340 (48%), Gaps = 37/340 (10%)

Query: 177 EGLFFLAESLGYN-QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           E +F L E L  N     + +F        GI   DG          L+L    +G  G 
Sbjct: 22  EAIFPLIEHLQTNIPVTRQTTFPR------GIVMPDG---------RLDLCKQGLGYLGF 66

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + + + L  N  +  L L +  + + GA  +A+L++ N  L V+ L  N I  +  + LA
Sbjct: 67  QPIAEALAANKTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLGCNQI--ADISELA 124

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL +N+++  L L  N  G  GA+ +A+ L  N S+R L L   +IGD+G+  ++  L 
Sbjct: 125 NALTKNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNIGDQGLAIIIDALI 184

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            +   +  L +G N I  KGA  +A  ++   ++  I L +ND+GD GA  +A+AL+QN 
Sbjct: 185 HQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDAGAVALAEALQQNH 244

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI-N 474
           T+  + +  N I  +G   +   ++ +  + ++DL Y           S+  +  G I N
Sbjct: 245 TLVELGVASNGITPQGGIRLIEAIQKHPALVNVDLGY-----------SQSTRVLGAIAN 293

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +L       G +GAE +A++L  N T+  ++LR NG+ ++
Sbjct: 294 SL-------GDAGAEAIANLLVNNQTLRKINLRRNGITEQ 326



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 140/296 (47%), Gaps = 15/296 (5%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+  +  G  G   +AE+L  N+T   +    NGI  AG      +++ N  L+ + L 
Sbjct: 54  LDLCKQGLGYLGFQPIAEALAANKTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLG 113

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I D  +  L + L  N  V  L L    +   GA  IAE+L +N  +R L+L N  I
Sbjct: 114 CNQIAD--ISELANALTKNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNI 171

Query: 287 DYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
              G   + +AL+ +N T+  L+L GN     GA  LA  L  N +++ + L+ N +GD 
Sbjct: 172 GDQGLAIIIDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDA 231

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL----------- 394
           G  AL   L      L  L + +N I+ +G   + E I+   +L+ ++L           
Sbjct: 232 GAVALAEALQQNH-TLVELGVASNGITPQGGIRLIEAIQKHPALVNVDLGYSQSTRVLGA 290

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             N +GD GAE IA+ L  N+T+  I+L  N I  +G  ++   L+ N  I  L L
Sbjct: 291 IANSLGDAGAEAIANLLVNNQTLRKINLRRNGITEQGKLSLIAGLQHNRTIRQLIL 346



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 151/333 (45%), Gaps = 56/333 (16%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L    + Y GF  +AEAL  N TI SL L  N  G  GA  +AK +E N+ L  ++L 
Sbjct: 54  LDLCKQGLGYLGFQPIAEALAANKTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLG 113

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D  I  L + L+ +   +  L +  N I   GA  +AE + +  S+  ++L   +
Sbjct: 114 CNQIAD--ISELANALT-KNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTN 170

Query: 399 IGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           IGD+G   I DAL  QNRT+  + LGGN I  KGA  +A +L+ NS I ++ L  N +G 
Sbjct: 171 IGDQGLAIIIDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGD 230

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            GA AL+E L+                             N+T+  L + +NG+  +   
Sbjct: 231 AGAVALAEALQ----------------------------QNHTLVELGVASNGITPQ--- 259

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
              G+    +     KH    ++ + Y Q  + L                  N + D GA
Sbjct: 260 --GGIRLIEAI---QKHPALVNVDLGYSQSTRVLGA--------------IANSLGDAGA 300

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            AIA  L  N+   +  +NL  N +T+ G+ +L
Sbjct: 301 EAIANLLVNNQ--TLRKINLRRNGITEQGKLSL 331



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 16/288 (5%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+ +     G+ G   +A+ +  NQ  E V    N I  A I      L  N ++ 
Sbjct: 77  KTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLGCNQI--ADISELANALTKNTSVT 134

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLE 280
            L L  NPIG  G   + ++L  N  +  L L + ++ D+G A  I  L+  N  +  L 
Sbjct: 135 GLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNIGDQGLAIIIDALIHQNRTVERLY 194

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N ID  G   LA  L +NS I+++ LN N  G  GA ALA+ L+ N +L EL +  N
Sbjct: 195 LGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDAGAVALAEALQQNHTLVELGVASN 254

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIG-----------NNSISAKGAFHVAEYIKNCKSL 389
            I  +G   L+  +      L  +D+G            NS+   GA  +A  + N ++L
Sbjct: 255 GITPQGGIRLIEAIQKHPA-LVNVDLGYSQSTRVLGAIANSLGDAGAEAIANLLVNNQTL 313

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
             INL  N I ++G   +   L+ NRTI  + L G   HS+  + I R
Sbjct: 314 RKINLRRNGITEQGKLSLIAGLQHNRTIRQLILDGKQ-HSQITALIQR 360



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 154 LNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           ++E A  L   +SV    +     G  G  F+AE L +N +   +      I   G+   
Sbjct: 120 ISELANALTKNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNIGDQGLAII 179

Query: 211 -DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            D ++  N  ++ L L GN I  +G + L  +L  N+ ++ + L+  DL D GA A+AE 
Sbjct: 180 IDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDAGAVALAEA 239

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN-----------GNYGGALG 318
           L+ N  L  L + +N I   G   L EA+ ++  + ++ L             N  G  G
Sbjct: 240 LQQNHTLVELGVASNGITPQGGIRLIEAIQKHPALVNVDLGYSQSTRVLGAIANSLGDAG 299

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS-SRKGKLAVLD 365
           A A+A  L  N++LR+++L  N I ++G  +L++GL  +R  +  +LD
Sbjct: 300 AEAIANLLVNNQTLRKINLRRNGITEQGKLSLIAGLQHNRTIRQLILD 347



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 17/160 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L    ++  A  ++ ++  + GD G   LAE+L  N T  E+  A+NGIT  G     
Sbjct: 206 QLLATLLRKNSAIKAILLNVNDLGDAGAVALAEALQQNHTLVELGVASNGITPQGGIRLI 265

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             +Q + AL  ++L  +    +  + L  I             +  L D GA+AIA LL 
Sbjct: 266 EAIQKHPALVNVDLGYS----QSTRVLGAI-------------ANSLGDAGAEAIANLLV 308

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           NN  LR + L  N I   G  SL   L  N TIR L L+G
Sbjct: 309 NNQTLRKINLRRNGITEQGKLSLIAGLQHNRTIRQLILDG 348


>gi|20467211|gb|AAM22459.1| CARD15-like protein [Homo sapiens]
          Length = 223

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 119/211 (56%), Gaps = 11/211 (5%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L  N  ++ L L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+ +++ LK + ++  L      IG  GA+ +A+ L+ N  +  LDL++N + D
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISD 120

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
                  G++    A+ + + +L  SL  N +  +GA+ +A +    N  L ++DL  N 
Sbjct: 121 A------GVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHAL-CANSTLKNLDLTANL 173

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
           + D GA AIA A++  E+  +TSL+L  NF+
Sbjct: 174 LHDQGARAIAVAVR--ENRTLTSLHLQWNFI 202



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 1/178 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L  
Sbjct: 1   LRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQK 59

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG  GA+++ADALKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I 
Sbjct: 60  NSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 119

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL AN L D+
Sbjct: 120 DAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQ 177



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 94/182 (51%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L  L+L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L +N I  
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISD 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N + D+G R
Sbjct: 121 AGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGAR 180

Query: 349 AL 350
           A+
Sbjct: 181 AI 182



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 88/181 (48%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 22  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLK 81

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L  S N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 82  ELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSL 141

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  ++A AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 142 RENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNF 201

Query: 342 I 342
           I
Sbjct: 202 I 202



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 92/192 (47%), Gaps = 35/192 (18%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L GN+I  +GA A+A  LK N  +TSL L  N +  DGA++++E L  +  ++ L L   
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
            IG  GA+ +AD L+ N                                SLK ++F S  
Sbjct: 61  SIGPMGAQRMADALKQN-------------------------------RSLKELMFSSNS 89

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
           I    GAK LA++ KV N+ L S+DL  N I D G  A+  AL  N+   + SL+L  N 
Sbjct: 90  IGD-GGAKALAEALKV-NQGLESLDLQSNSISDAGVAALMGALCTNQ--TLLSLSLRENS 145

Query: 602 LTKFGQSALTDA 613
           ++  G  A+  A
Sbjct: 146 ISPEGAQAIAHA 157


>gi|440793719|gb|ELR14895.1| calponin domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 785

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 118/217 (54%), Gaps = 1/217 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L  E  +A+  +L +N  L+ L L N  ++ +    LA AL   + +R L L 
Sbjct: 526 LHLDDRPLSQEALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALTHLRVLKLG 585

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + GA A+A+ L   KSL EL+L+ N IGDEG  AL   L+  K  L V+D+  + 
Sbjct: 586 KNKISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQALA-HKSSLRVVDLSASK 644

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           +S KGA  +A  +     L  + L  N I DEGA+ +A  L++   + +I LGGN I  +
Sbjct: 645 VSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDE 704

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           GA AIA  LK+N  IT +DL+ N +G  GA  + +VL
Sbjct: 705 GAQAIAAALKENDKITHVDLSANKLGNAGASHIRQVL 741



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 1/205 (0%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           LHL+          AL   L  N  L+ L L    + D  +R L   L++    L VL +
Sbjct: 526 LHLDDRPLSQEALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALT-HLRVLKL 584

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           G N IS+ GA  VAE +   KSL  + L  N+IGDEGA+ +A AL    ++  +DL  + 
Sbjct: 585 GKNKISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASK 644

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           +  KGA+AIA  L +   + SL L+ N I  +GA+AL+ +L+    + ++ LG   I   
Sbjct: 645 VSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDE 704

Query: 487 GAEFVADMLRYNNTISILDLRANGL 511
           GA+ +A  L+ N+ I+ +DL AN L
Sbjct: 705 GAQAIAAALKENDKITHVDLSANKL 729



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 1/231 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  R    E L  L   L +N   + +S     +    ++     L +   L+ L L  N
Sbjct: 528 LDDRPLSQEALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALTHLRVLKLGKN 587

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I   G   + + L     +E L L+  ++ DEGA A+A+ L + S LRV++L+ + +  
Sbjct: 588 KISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASKVSD 647

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++A AL E   + SL L+ N     GA ALA  L    +L  +HL GN I DEG +
Sbjct: 648 KGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDEGAQ 707

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           A+ + L     K+  +D+  N +   GA H+ + + + + L  +NL  N +
Sbjct: 708 AIAAALKE-NDKITHVDLSANKLGNAGASHIRQVLDDNEVLEGVNLSENKL 757



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +++   + ++    GDEG   LA++L +  +   V  +A+ ++  G  A  G L     L
Sbjct: 604 MKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASKVSDKGAAAIAGALTEEHGL 663

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            +L LS N I DEG + L  +L     +E + L    + DEGA+AIA  LK N  +  ++
Sbjct: 664 GSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDEGAQAIAAALKENDKITHVD 723

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+ N +  +G + + + L +N  +  ++L+ N
Sbjct: 724 LSANKLGNAGASHIRQVLDDNEVLEGVNLSEN 755



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 62/120 (51%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+S     D+G   +A +L        +  + N IT  G +A   +L+   AL++++L 
Sbjct: 638 VDLSASKVSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLG 697

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN I DEG + +   L +N  +  + LS+  L + GA  I ++L +N +L  + L+ N +
Sbjct: 698 GNGISDEGAQAIAAALKENDKITHVDLSANKLGNAGASHIRQVLDDNEVLEGVNLSENKL 757



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 7/240 (2%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           VL + +  +S +    +   + +   L  ++L   ++ D    ++A AL     +  + L
Sbjct: 525 VLHLDDRPLSQEALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALTHLRVLKL 584

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
           G N I S GA+A+A  L     +  L L  N IG +GA AL++ L    ++  + L   +
Sbjct: 585 GKNKISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASK 644

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           +   GA  +A  L   + +  L L  N + DE       L    +A+ S+ H+    +  
Sbjct: 645 VSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESI-HLGGNGISD 703

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
              +GA+ +A + K  N+ +T +DL+ N++ + GA  I Q L  NE   +  +NL+ N L
Sbjct: 704 ---EGAQAIAAALK-ENDKITHVDLSANKLGNAGASHIRQVLDDNE--VLEGVNLSENKL 757



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E     S+ +S     DEG   LA  L      E +    NGI+  G +A    L+ N  
Sbjct: 659 EEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDEGAQAIAAALKENDK 718

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +  ++LS N +G+ G   +  +L DN  +E + LS
Sbjct: 719 ITHVDLSANKLGNAGASHIRQVLDDNEVLEGVNLS 753


>gi|402876801|ref|XP_003902142.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Papio anubis]
          Length = 471

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I +L L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDIGGEQLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+EGA  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 SMDGA 330



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S        
Sbjct: 164 ISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNY-RIKKLDLSHNQFS-------- 214

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E++   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 215 --------------------DIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N +G +GA AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 315 LRVLKLFLNPI 325



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D ++E A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N +G
Sbjct: 211 NQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+G N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEGAVALGEVLRLNSC-LVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 207 DLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  +GA  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 266 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 326 SMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 376



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 35/299 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 212 QFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N+ +  LD+  N + +E                               
Sbjct: 272 EGAVALGEVLRLNSCLVYLDVGGNDIGNE------------------------------- 300

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            GA  +++  +  NE+L  + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 301 -GASKISKGLES-NESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 ESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +   G  +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 39/238 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N  +T ++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +  +L++N  +  ++++ N +G +GA+ +S+  +                          
Sbjct: 136 LVEMLQENYYLQEMNISNNHLGLEGARIISDFFE-------------------------- 169

Query: 495 LRYNNTISILDLRANGLRDEVCSG-CNGLSF-FHSAIYSLKHMLFYSLCINYLQGAKCLA 552
            R +++I  L+L  N  ++E  +  C  LS  +      L H  F  +      G + L 
Sbjct: 170 -RNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDI------GGEQLG 222

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           Q    +N  LTS+DL++N     GA A+   L+ N  V +T L+L+ N L   G  AL
Sbjct: 223 QML-AINVGLTSLDLSWNNFHTRGAVALCNGLRGN--VTLTKLDLSMNGLGNEGAVAL 277


>gi|444708816|gb|ELW49855.1| hypothetical protein TREES_T100012222 [Tupaia chinensis]
          Length = 511

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 136/276 (49%), Gaps = 17/276 (6%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 61  NMEDSHMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQENYYL 120

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + L +S  +L  EGA+ I+E L+ N S L  L L+ N       T L++AL  N  ++ L
Sbjct: 121 QELDISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANYRLKRL 180

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    LG   L + L  N  L  L L  N I  +G  AL +GL       A L + 
Sbjct: 181 DLSHNQFSDLGGEQLGQMLALNVGLTALDLSWNHIHTQGAVALCNGLR------ATLTLV 234

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
             S+S +    + +          ++L MN  G+EGA  + + L+ N T+  +D+ GN+I
Sbjct: 235 LFSLSMEANVTLKK----------LDLSMNGFGNEGASALGETLRLNSTLVYLDVNGNDI 284

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            ++GA  I+R L+ N  +  L L  NPI  +GA +L
Sbjct: 285 GNEGAFKISRGLESNESLRVLKLFLNPISMEGAVSL 320



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 17/267 (6%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           +NL+ + +G  G K +   LV N  + +L+L    + +EG  ++ E+L+ N  L+ L+++
Sbjct: 67  MNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQENYYLQELDIS 126

Query: 283 NNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            N +   G   ++E L  N S + +L L+GN      A  L++ L  N  L+ L L  N 
Sbjct: 127 ENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANYRLKRLDLSHNQ 186

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
             D G   L   L+   G L  LD+  N I  +GA  +   ++   +L+  +L M     
Sbjct: 187 FSDLGGEQLGQMLALNVG-LTALDLSWNHIHTQGAVALCNGLRATLTLVLFSLSM----- 240

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
                     + N T+  +DL  N   ++GASA+   L+ NS +  LD+  N IG +GA 
Sbjct: 241 ----------EANVTLKKLDLSMNGFGNEGASALGETLRLNSTLVYLDVNGNDIGNEGAF 290

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGA 488
            +S  L+ + ++  LKL    I   GA
Sbjct: 291 KISRGLESNESLRVLKLFLNPISMEGA 317



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 15/264 (5%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ L+
Sbjct: 65  SHMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQENYYLQELD 124

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + + L  N + +  L LS    ++E A  +++ L  N  L+ L+L++
Sbjct: 125 ISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANYRLKRLDLSH 184

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-------------EGNK 330
           N     G   L + L  N  + +L L+ N+    GA AL  GL             E N 
Sbjct: 185 NQFSDLGGEQLGQMLALNVGLTALDLSWNHIHTQGAVALCNGLRATLTLVLFSLSMEANV 244

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +L++L L  N  G+EG  AL   L      L  LD+  N I  +GAF ++  +++ +SL 
Sbjct: 245 TLKKLDLSMNGFGNEGASALGETL-RLNSTLVYLDVNGNDIGNEGAFKISRGLESNESLR 303

Query: 391 WINLYMNDIGDEGAEKIADALKQN 414
            + L++N I  EGA  +  A+K+N
Sbjct: 304 VLKLFLNPISMEGAVSLILAIKKN 327



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 125/287 (43%), Gaps = 43/287 (14%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            + N     + L+   L   G KAIA  L +N+ +  LEL +N I   G  SL E L EN
Sbjct: 58  FIRNMEDSHMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQEN 117

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             ++ L ++ N  G  GA  +++ L+ N S L  L L GNS  +E    L   LS+   +
Sbjct: 118 YYLQELDISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANY-R 176

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  LD+ +N  S                            D G E++   L  N  +T +
Sbjct: 177 LKRLDLSHNQFS----------------------------DLGGEQLGQMLALNVGLTAL 208

Query: 421 DLGGNNIHSKGASAIARVLK-------------DNSVITSLDLAYNPIGADGAKALSEVL 467
           DL  N+IH++GA A+   L+              N  +  LDL+ N  G +GA AL E L
Sbjct: 209 DLSWNHIHTQGAVALCNGLRATLTLVLFSLSMEANVTLKKLDLSMNGFGNEGASALGETL 268

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           + +  +  L +    IG  GA  ++  L  N ++ +L L  N +  E
Sbjct: 269 RLNSTLVYLDVNGNDIGNEGAFKISRGLESNESLRVLKLFLNPISME 315



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 52/293 (17%)

Query: 308 HLNGNYGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           H+N N+ G    G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  LD
Sbjct: 66  HMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQENY-YLQELD 124

Query: 366 IGNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           I  N +  +GA  ++E++ +N  +L  + L  N   +E A  ++ AL  N  +  +DL  
Sbjct: 125 ISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANYRLKRLDLSH 184

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N     G   + ++L  N  +T+LDL++N I   GA AL   L+      TL L    + 
Sbjct: 185 NQFSDLGGEQLGQMLALNVGLTALDLSWNHIHTQGAVALCNGLR-----ATLTLVLFSLS 239

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
                     +  N T+  LDL  NG  +E                              
Sbjct: 240 ----------MEANVTLKKLDLSMNGFGNE------------------------------ 259

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
             GA  L ++ ++ N  L  +D+  N+I ++GAF I++ L++NE + V  L L
Sbjct: 260 --GASALGETLRL-NSTLVYLDVNGNDIGNEGAFKISRGLESNESLRVLKLFL 309



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 20/203 (9%)

Query: 142 FTGKLFRESKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            +G  F+E   TL   ++ L A      +D+S   F D G   L + L  N     +  +
Sbjct: 154 LSGNSFKEESATL--LSQALSANYRLKRLDLSHNQFSDLGGEQLGQMLALNVGLTALDLS 211

Query: 199 ANGITAAGIKA-------------FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
            N I   G  A             F   +++N+ LK L+LS N  G+EG   L + L  N
Sbjct: 212 WNHIHTQGAVALCNGLRATLTLVLFSLSMEANVTLKKLDLSMNGFGNEGASALGETLRLN 271

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
           + +  L ++  D+ +EGA  I+  L++N  LRVL+L  N I   G  SL  A+ +N   R
Sbjct: 272 STLVYLDVNGNDIGNEGAFKISRGLESNESLRVLKLFLNPISMEGAVSLILAIKKNPKSR 331

Query: 306 SLHLNGNYGGALGANALAKGLEG 328
              L  +    L  +   K LEG
Sbjct: 332 MEEL--DISNVLVTDQFTKILEG 352


>gi|302786738|ref|XP_002975140.1| hypothetical protein SELMODRAFT_31008 [Selaginella moellendorffii]
 gi|300157299|gb|EFJ23925.1| hypothetical protein SELMODRAFT_31008 [Selaginella moellendorffii]
          Length = 521

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L    N I  +  K + + LV  + +  L   +    
Sbjct: 216 NALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVE-LVSGSKLRTLHFHNNMSG 274

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+ IA L++  + L   +L+++ +   G  +LAEAL   S+++ L L  N  G  G 
Sbjct: 275 DLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRDNIFGEEGG 334

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL K       L EL+L    + + G++A++  L +   KL+VLD+GNN IS   A H+
Sbjct: 335 FALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVLDLGNNDISTSCAPHL 394

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARV 438
             +++   +L  ++L  N++ D+G   +++AL+Q +  +  +D   N++ S GA A A+ 
Sbjct: 395 VRFLEKKAALKKLSLAENELKDKGVILVSNALRQGHDDLEELDFTLNDVGSDGAIAAAKA 454

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +        L L  N I A G  ++  VL
Sbjct: 455 VTTKPRFKLLILESNHISAKGLASVRSVL 483



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 131/263 (49%), Gaps = 14/263 (5%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LEG+  LR L+L  N++G++G+RA  S L S+K  L  L   NN IS+  A  + E +  
Sbjct: 203 LEGS-DLRFLYLSNNALGEKGVRAFGSLLKSQK-HLEDLRFENNGISSDAAKAIVELVSG 260

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            K L  ++ + N  GD GAE+IA  ++Q   +    L  + + +KGA A+A  L+  S +
Sbjct: 261 SK-LRTLHFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSL 319

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTISIL 504
             LDL  N  G +G  AL +  +    +  L L    +  +G + V + L      +S+L
Sbjct: 320 KKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVL 379

Query: 505 DLRANGLRDEVCSGC-NGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEA 561
           DL  N    ++ + C   L  F     +LK +   SL  N L  +G   ++ + +  ++ 
Sbjct: 380 DLGNN----DISTSCAPHLVRFLEKKAALKKL---SLAENELKDKGVILVSNALRQGHDD 432

Query: 562 LTSIDLAFNEIRDDGAFAIAQAL 584
           L  +D   N++  DGA A A+A+
Sbjct: 433 LEELDFTLNDVGSDGAIAAAKAV 455



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 5/167 (2%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A+ L+A SS+   D+    FG+EG F L ++       EE+  +  G+  AG++A    
Sbjct: 309 LAEALQACSSLKKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEA 368

Query: 214 LQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           L++    L  L+L  N I       L   L   A +++L L+  +L+D+G   ++  L+ 
Sbjct: 369 LETTAPKLSVLDLGNNDISTSCAPHLVRFLEKKAALKKLSLAENELKDKGVILVSNALRQ 428

Query: 273 -NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            +  L  L+   N +   G  + A+A+      + L L  N+  A G
Sbjct: 429 GHDDLEELDFTLNDVGSDGAIAAAKAVTTKPRFKLLILESNHISAKG 475


>gi|168986655|ref|NP_919263.2| uncharacterized protein C14orf166B [Homo sapiens]
 gi|308153427|sp|Q0VAA2.2|CN16B_HUMAN RecName: Full=Uncharacterized protein C14orf166B
          Length = 488

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ NR +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 228 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L   +  L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEVALALGEVLRLNRC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-QIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 332 LRVLKLFLNPI 342



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNMA-VTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 168

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + I +++L GN+     A+ + + L  N  I  LDL++N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKLDLSHN 228

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NG  +
Sbjct: 229 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 288

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 289 EVA-------------LALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLES-NESLRV 334

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 335 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 DSAALLCQALSTNYQIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  N  +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|326426541|gb|EGD72111.1| hypothetical protein PTSG_11549 [Salpingoeca sp. ATCC 50818]
          Length = 1203

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 136/260 (52%), Gaps = 4/260 (1%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           ++D+GA AIA+ L+       L L  N+I   G T+LA  L EN  IRSL L+ N   + 
Sbjct: 650 IQDDGATAIAQALECVDTCEHLALPENLITADGATALAALLEENMYIRSLDLSTNDIRSR 709

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G  ALA  ++    L+ L L  N+  D  +  L + L      LA L + NN +    A 
Sbjct: 710 GLEALAHAIKNGAGLKSLRLDSNNFLDVDMSPLCNALLD-NDTLAELSLSNNRLGNAAAV 768

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +   + N   L  ++L  N I D G   IA +L+ N ++T ++L GN I++ GA+A+A 
Sbjct: 769 QLGRMLANNTGLSTLDLSWNCIQDAGIRAIAQSLEANVSLTKLNLQGNGIYNAGAAALAL 828

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            +K+N+ +TSLDL++N I  +GA+ L+  LK    +  + L    I A G + V   +  
Sbjct: 829 AIKNNTTLTSLDLSHNNIRDEGAELLASALKSAPGLEHISLALNPISAKGLKAVLYAIAE 888

Query: 498 NNTISILDLRANGLR-DEVC 516
           N+TI  LD+   GL  DE C
Sbjct: 889 NSTIRSLDI--GGLEMDEEC 906



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +SV +  +   D+G   +A++L    T E ++   N ITA G  A   +L+ N+ +++L+
Sbjct: 641 ASVVVRAQGIQDDGATAIAQALECVDTCEHLALPENLITADGATALAALLEENMYIRSLD 700

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N I   G++ L   + + AG++ L+L S +  D     +   L +N  L  L L+NN
Sbjct: 701 LSTNDIRSRGLEALAHAIKNGAGLKSLRLDSNNFLDVDMSPLCNALLDNDTLAELSLSNN 760

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +  +    L   L  N+ + +L L+ N     G  A+A+ LE N SL +L+L GN I +
Sbjct: 761 RLGNAAAVQLGRMLANNTGLSTLDLSWNCIQDAGIRAIAQSLEANVSLTKLNLQGNGIYN 820

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  AL   + +    L  LD+ +N+I  +GA  +A  +K+   L  I+L +N I  +G 
Sbjct: 821 AGAAALALAIKN-NTTLTSLDLSHNNIRDEGAELLASALKSAPGLEHISLALNPISAKGL 879

Query: 405 EKIADALKQNRTITTIDLGG 424
           + +  A+ +N TI ++D+GG
Sbjct: 880 KAVLYAIAENSTIRSLDIGG 899



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 100/234 (42%), Gaps = 33/234 (14%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  N I+A GA  +A  ++    +  ++L  NDI   G E +A A+K    + ++ L 
Sbjct: 671 LALPENLITADGATALAALLEENMYIRSLDLSTNDIRSRGLEALAHAIKNGAGLKSLRLD 730

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            NN      S +   L DN  +  L L+ N +G   A  L  +L  +  ++TL L W  I
Sbjct: 731 SNNFLDVDMSPLCNALLDNDTLAELSLSNNRLGNAAAVQLGRMLANNTGLSTLDLSWNCI 790

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
             +G   +A  L  N +++ L+L+ NG                  IY+           N
Sbjct: 791 QDAGIRAIAQSLEANVSLTKLNLQGNG------------------IYNAGAAALALAIKN 832

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
                          N  LTS+DL+ N IRD+GA  +A ALK+   +   SL L
Sbjct: 833 ---------------NTTLTSLDLSHNNIRDEGAELLASALKSAPGLEHISLAL 871



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 28/176 (15%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+ +   NF D  +  L  +L  N T  E+S + N +  A       +L +N  L TL
Sbjct: 724 LKSLRLDSNNFLDVDMSPLCNALLDNDTLAELSLSNNRLGNAAAVQLGRMLANNTGLSTL 783

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQ-----------------------LSSVDL-- 258
           +LS N I D G++ +   L  N  + +L                        L+S+DL  
Sbjct: 784 DLSWNCIQDAGIRAIAQSLEANVSLTKLNLQGNGIYNAGAAALALAIKNNTTLTSLDLSH 843

Query: 259 ---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
              RDEGA+ +A  LK+   L  + L  N I   G  ++  A+ ENSTIRSL + G
Sbjct: 844 NNIRDEGAELLASALKSAPGLEHISLALNPISAKGLKAVLYAIAENSTIRSLDIGG 899


>gi|390342621|ref|XP_787322.3| PREDICTED: uncharacterized protein C14orf166B homolog
           [Strongylocentrotus purpuratus]
          Length = 678

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 3/278 (1%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
           T   VS   +G+   G KA    L +N  + TL+L  N +  +G   + D+L +N  +  
Sbjct: 150 TTSRVSMKHHGLGPHGAKAIAVALVANTTVLTLDLEDNWVEGDGGVYIADMLKENCYIND 209

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L+   +   GAKA+ E+L +N+ LR + L+ N           E+   N  I+ L L+
Sbjct: 210 LNLAENKIGSRGAKAMGEMLLDNTNLRRVNLSGNEFKDKDANEFTESFKSNYRIKELILS 269

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G +G   L  G+   +S+  L+L  N +  +G  A+  GL+     +  L++  N 
Sbjct: 270 HNEFGEVGGEILGHGIGATESIEHLNLSWNHLRRKGAIAICRGLAENLS-IKRLNLSWNG 328

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
              +GA  +AE +K   +L W+++  N + +EGA  +A  ++ N +I  + LG N I + 
Sbjct: 329 FGNEGALAMAEALKFNSTLQWLDMSNNRVTNEGAFMLAKGVEINDSIKVLKLGQNPITAA 388

Query: 431 GASAIARVLKDNS--VITSLDLAYNPIGADGAKALSEV 466
           GA AI   +K+NS  V+  LDLA   +  D  K L+E+
Sbjct: 389 GAMAILIAIKNNSNTVLELLDLADITVNKDCVKLLTEL 426



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 37/292 (12%)

Query: 228 NPIGDEGVKCLC-DILVDNAG-------VERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           +P G +  K  C DI V  A          R+ +    L   GAKAIA  L  N+ +  L
Sbjct: 123 DPTGRKTYKQACLDIGVVPASHFLRHMTTSRVSMKHHGLGPHGAKAIAVALVANTTVLTL 182

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L +N ++  G   +A+ L EN  I  L+L  N  G+ GA A+ + L  N +LR ++L G
Sbjct: 183 DLEDNWVEGDGGVYIADMLKENCYINDLNLAENKIGSRGAKAMGEMLLDNTNLRRVNLSG 242

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N   D+                   D    + S K  + + E I          L  N+ 
Sbjct: 243 NEFKDK-------------------DANEFTESFKSNYRIKELI----------LSHNEF 273

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G+ G E +   +    +I  ++L  N++  KGA AI R L +N  I  L+L++N  G +G
Sbjct: 274 GEVGGEILGHGIGATESIEHLNLSWNHLRRKGAIAICRGLAENLSIKRLNLSWNGFGNEG 333

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           A A++E LKF+  +  L +   ++   GA  +A  +  N++I +L L  N +
Sbjct: 334 ALAMAEALKFNSTLQWLDMSNNRVTNEGAFMLAKGVEINDSIKVLKLGQNPI 385



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 8/282 (2%)

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           HG  +G  G +A+   L +    L  LD+ +N +   G  ++A+ +K    +  +NL  N
Sbjct: 159 HG--LGPHGAKAIAVALVANTTVL-TLDLEDNWVEGDGGVYIADMLKENCYINDLNLAEN 215

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG  GA+ + + L  N  +  ++L GN    K A+      K N  I  L L++N  G 
Sbjct: 216 KIGSRGAKAMGEMLLDNTNLRRVNLSGNEFKDKDANEFTESFKSNYRIKELILSHNEFGE 275

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            G + L   +    +I  L L W  +   GA  +   L  N +I  L+L  NG  +E   
Sbjct: 276 VGGEILGHGIGATESIEHLNLSWNHLRRKGAIAICRGLAENLSIKRLNLSWNGFGNEGAL 335

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
                  F+S +  L   +  +   N  +GA  LA+  + +N+++  + L  N I   GA
Sbjct: 336 AMAEALKFNSTLQWLD--MSNNRVTN--EGAFMLAKGVE-INDSIKVLKLGQNPITAAGA 390

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYE 619
            AI  A+K N +  +  L+LA+  + K     LT+ K++  E
Sbjct: 391 MAILIAIKNNSNTVLELLDLADITVNKDCVKLLTELKEVRPE 432



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 13/248 (5%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + ++ +   GA  +A  +    ++L ++L  N +  +G   IAD LK+N  I  ++L  N
Sbjct: 156 MKHHGLGPHGAKAIAVALVANTTVLTLDLEDNWVEGDGGVYIADMLKENCYINDLNLAEN 215

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I S+GA A+  +L DN+ +  ++L+ N      A   +E  K +  I  L L   + G 
Sbjct: 216 KIGSRGAKAMGEMLLDNTNLRRVNLSGNEFKDKDANEFTESFKSNYRIKELILSHNEFGE 275

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
            G E +   +    +I  L+L  N LR +   + C GL    +   S+K +   +L  N 
Sbjct: 276 VGGEILGHGIGATESIEHLNLSWNHLRRKGAIAICRGL----AENLSIKRL---NLSWNG 328

Query: 545 L--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
              +GA  +A++ K  N  L  +D++ N + ++GAF +A+ ++ N+ + V  L L  N +
Sbjct: 329 FGNEGALAMAEALK-FNSTLQWLDMSNNRVTNEGAFMLAKGVEINDSIKV--LKLGQNPI 385

Query: 603 TKFGQSAL 610
           T  G  A+
Sbjct: 386 TAAGAMAI 393



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 83/163 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V++SG  F D+      ES   N   +E+  + N     G +     + +  +++ LNLS
Sbjct: 238 VNLSGNEFKDKDANEFTESFKSNYRIKELILSHNEFGEVGGEILGHGIGATESIEHLNLS 297

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +  +G   +C  L +N  ++RL LS     +EGA A+AE LK NS L+ L+++NN +
Sbjct: 298 WNHLRRKGAIAICRGLAENLSIKRLNLSWNGFGNEGALAMAEALKFNSTLQWLDMSNNRV 357

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
              G   LA+ +  N +I+ L L  N   A GA A+   ++ N
Sbjct: 358 TNEGAFMLAKGVEINDSIKVLKLGQNPITAAGAMAILIAIKNN 400



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 7/198 (3%)

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
           T + + +  + +   GA AIA  L  N+ + +LDL  N +  DG   ++++LK +  IN 
Sbjct: 150 TTSRVSMKHHGLGPHGAKAIAVALVANTTVLTLDLEDNWVEGDGGVYIADMLKENCYIND 209

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHM 535
           L L   +IG+ GA+ + +ML  N  +  ++L  N  +D+     N  +    + Y +K +
Sbjct: 210 LNLAENKIGSRGAKAMGEMLLDNTNLRRVNLSGNEFKDK---DANEFTESFKSNYRIKEL 266

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           +        + G + L        E++  ++L++N +R  GA AI + L   E++++  L
Sbjct: 267 ILSHNEFGEV-GGEILGHGIGAT-ESIEHLNLSWNHLRRKGAIAICRGLA--ENLSIKRL 322

Query: 596 NLANNFLTKFGQSALTDA 613
           NL+ N     G  A+ +A
Sbjct: 323 NLSWNGFGNEGALAMAEA 340



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 5/263 (1%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +  KE    + ++++    G  G   + E L  N     V+ + N         F    +
Sbjct: 199 DMLKENCYINDLNLAENKIGSRGAKAMGEMLLDNTNLRRVNLSGNEFKDKDANEFTESFK 258

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           SN  +K L LS N  G+ G + L   +     +E L LS   LR +GA AI   L  N  
Sbjct: 259 SNYRIKELILSHNEFGEVGGEILGHGIGATESIEHLNLSWNHLRRKGAIAICRGLAENLS 318

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           ++ L L+ N     G  ++AEAL  NST++ L ++ N     GA  LAKG+E N S++ L
Sbjct: 319 IKRLNLSWNGFGNEGALAMAEALKFNSTLQWLDMSNNRVTNEGAFMLAKGVEINDSIKVL 378

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
            L  N I   G  A++  + +     L +LD+ + +++ K    +   +K  +    +  
Sbjct: 379 KLGQNPITAAGAMAILIAIKNNSNTVLELLDLADITVN-KDCVKLLTELKEVRPEFLV-A 436

Query: 395 YMNDIG--DEGAEKIADALKQNR 415
           Y + +G  ++  EK  D +K  R
Sbjct: 437 YQSSVGQFEKPPEKEPDPVKMLR 459


>gi|326434835|gb|EGD80405.1| hypothetical protein PTSG_11050 [Salpingoeca sp. ATCC 50818]
          Length = 1515

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 6/172 (3%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            S+ D+ IRA+ + +  ++       +G++ + A     VA+ +K+   L  ++L  N I
Sbjct: 27  KSVKDK-IRAIANNMCGKEVDFYGAGLGDSGVKA-----VAQALKDNTCLNKLDLNYNAI 80

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA  +A+ LK N T+ T+ L  N+I  KGA A+A +LK N+ +TSL L  NPIG +G
Sbjct: 81  SDAGASALAEMLKHNATMPTLYLHNNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEG 140

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           A AL+EVLK +  + TL LG   IG  GA  +A+ML++N  + IL LR N +
Sbjct: 141 AVALAEVLKHNTTMTTLGLGQNSIGDPGAVALAEMLKHNTALDILSLRKNSI 192



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 92/155 (59%), Gaps = 1/155 (0%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + +  N   +E+  +G  +GD G++A+   L      L  LD+  N+IS  GA  +AE +
Sbjct: 34  RAIANNMCGKEVDFYGAGLGDSGVKAVAQALKDNTC-LNKLDLNYNAISDAGASALAEML 92

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+  ++  + L+ N IG +GA  +A+ LK N T+T++ LG N I  +GA A+A VLK N+
Sbjct: 93  KHNATMPTLYLHNNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVLKHNT 152

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +T+L L  N IG  GA AL+E+LK +  ++ L L
Sbjct: 153 TMTTLGLGQNSIGDPGAVALAEMLKHNTALDILSL 187



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 1/160 (0%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L D G KA+A+ LK+N+ L  L+LN N I  +G ++LAE L  N+T+ +L+L+ N  G  
Sbjct: 52  LGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLHNNSIGGK 111

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA ALA+ L+ N ++  L L  N IGDEG  AL   L      +  L +G NSI   GA 
Sbjct: 112 GAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVL-KHNTTMTTLGLGQNSIGDPGAV 170

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
            +AE +K+  +L  ++L  N I   G   +  AL QNRT+
Sbjct: 171 ALAEMLKHNTALDILSLRKNSITPAGGAALGAALDQNRTL 210



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 29/167 (17%)

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG  ++A+AL +N+ +  L LN N     GA+ALA+ L+ N ++  L+LH NSIG     
Sbjct: 55  SGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLHNNSIG----- 109

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
                                    KGA  +AE +K+  ++  + L +N IGDEGA  +A
Sbjct: 110 ------------------------GKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALA 145

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           + LK N T+TT+ LG N+I   GA A+A +LK N+ +  L L  N I
Sbjct: 146 EVLKHNTTMTTLGLGQNSIGDPGAVALAEMLKHNTALDILSLRKNSI 192



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 86/158 (54%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           ++  N   +EV F   G+  +G+KA    L+ N  L  L+L+ N I D G   L ++L  
Sbjct: 35  AIANNMCGKEVDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKH 94

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           NA +  L L +  +  +GA A+AE+LK+N+ +  L L  N I   G  +LAE L  N+T+
Sbjct: 95  NATMPTLYLHNNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVLKHNTTM 154

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +L L  N  G  GA ALA+ L+ N +L  L L  NSI
Sbjct: 155 TTLGLGQNSIGDPGAVALAEMLKHNTALDILSLRKNSI 192



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 35/184 (19%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +D  G  +   G  A+A+ LKDN+ +  LDL YN I   GA AL+E+LK +  + TL L 
Sbjct: 45  VDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLH 104

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
              IG  GA  +A+ML++N T++ L L  N + DE                         
Sbjct: 105 NNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDE------------------------- 139

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                  GA  LA+  K  N  +T++ L  N I D GA A+A+ LK N   A+  L+L  
Sbjct: 140 -------GAVALAEVLK-HNTTMTTLGLGQNSIGDPGAVALAEMLKHN--TALDILSLRK 189

Query: 600 NFLT 603
           N +T
Sbjct: 190 NSIT 193



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 88/175 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD  G   GD G+  +A++L  N    ++    N I+ AG  A   +L+ N  + TL L 
Sbjct: 45  VDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLH 104

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IG +G   L ++L  N  +  L L    + DEGA A+AE+LK+N+ +  L L  N I
Sbjct: 105 NNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVLKHNTTMTTLGLGQNSI 164

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              G  +LAE L  N+ +  L L  N     G  AL   L+ N++L+ L +  NS
Sbjct: 165 GDPGAVALAEMLKHNTALDILSLRKNSITPAGGAALGAALDQNRTLKRLWVCKNS 219



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 86/183 (46%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D++     D G   LAE L +N T   +    N I   G  A   +L+ N  + +L
Sbjct: 70  LNKLDLNYNAISDAGASALAEMLKHNATMPTLYLHNNSIGGKGAVALAEMLKHNTTMTSL 129

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  NPIGDEG   L ++L  N  +  L L    + D GA A+AE+LK+N+ L +L L  
Sbjct: 130 ILGINPIGDEGAVALAEVLKHNTTMTTLGLGQNSIGDPGAVALAEMLKHNTALDILSLRK 189

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  +L  AL +N T++ L +  N      A   A  ++      +   H  + G
Sbjct: 190 NSITPAGGAALGAALDQNRTLKRLWVCKNSPATARAFGAALPVDREIDTGDWSQHDTTHG 249

Query: 344 DEG 346
           D+ 
Sbjct: 250 DQA 252



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           R + +N     +D     +G  G KA+++ LK +  +N L L +  I  +GA  +A+ML+
Sbjct: 34  RAIANNMCGKEVDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLK 93

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
           +N T+  L L  N +                                  +GA  LA+  K
Sbjct: 94  HNATMPTLYLHNNSIGG--------------------------------KGAVALAEMLK 121

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  +TS+ L  N I D+GA A+A+ LK N    +T+L L  N +   G  AL +
Sbjct: 122 H-NTTMTSLILGINPIGDEGAVALAEVLKHN--TTMTTLGLGQNSIGDPGAVALAE 174


>gi|326428417|gb|EGD73987.1| hypothetical protein PTSG_05682 [Salpingoeca sp. ATCC 50818]
          Length = 1296

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 116/227 (51%), Gaps = 2/227 (0%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L  V L  +GA  IA  L+ N+ +++L L +N I   G  +LA  L  N TI  L L  N
Sbjct: 43  LGFVSLDSQGATVIAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQSN 102

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA ALA  L  NKS+ EL LH N+IG  G  AL + L +    +  + +  NSI 
Sbjct: 103 RIGNEGAIALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRT-NATITHVSLFANSIG 161

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKG 431
            KGA  +AE +K+  +L  + L  N IGD G E +A AL+  N T+  + L  N +    
Sbjct: 162 HKGAQALAEMLKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSDSS 221

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           A A+A +L+ N  +T+L L  N I   G   L   L  + ++  L L
Sbjct: 222 AVALANMLRRNKAVTTLGLDINTITPGGGAELGASLHENHSLRVLTL 268



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 30/283 (10%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V+     + + G       L+ N  +K L L  N IG +G K L ++L  N  +  L+L 
Sbjct: 41  VTLGFVSLDSQGATVIAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQ 100

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           S  + +EGA A+A++L  N  +  L L++N I  +G  +LA  L  N+TI  + L  N  
Sbjct: 101 SNRIGNEGAIALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANSI 160

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA ALA+ L+ + +L  L L  N+IGD G+ AL   L +    L V           
Sbjct: 161 GHKGAQALAEMLKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQV----------- 209

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
                          LW+N   N + D  A  +A+ L++N+ +TT+ L  N I   G + 
Sbjct: 210 ---------------LWLNC--NGLSDSSAVALANMLRRNKAVTTLGLDINTITPGGGAE 252

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           +   L +N  +  L L++N      A+A    +  H  I T K
Sbjct: 253 LGASLHENHSLRVLTLSHNSTAT--ARAFGAAVPVHREIWTGK 293



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 1/154 (0%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           + +L +G+N I   GA  +A  + + K++  + L  N IG+EGA  +AD L +N+++T +
Sbjct: 66  VKLLGLGHNCIGPDGAKALANMLASNKTITILRLQSNRIGNEGAIALADVLCRNKSVTEL 125

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  NNI   GA A+A +L+ N+ IT + L  N IG  GA+AL+E+LK    +  LKLG 
Sbjct: 126 RLHHNNIGLAGAEALANMLRTNATITHVSLFANSIGHKGAQALAEMLKDSTTLTHLKLGE 185

Query: 481 CQIGASGAEFVADMLRYNN-TISILDLRANGLRD 513
             IG +G E +A  L  +N T+ +L L  NGL D
Sbjct: 186 NAIGDAGVEALAKALETDNSTLQVLWLNCNGLSD 219



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 42/273 (15%)

Query: 341 SIGDEG---IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            +G++G   IRA+  G          + +G  S+ ++GA  +A  ++    +  + L  N
Sbjct: 20  QLGEDGKNEIRAIADGTCG-----PAVTLGFVSLDSQGATVIAHALRQNTCVKLLGLGHN 74

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG +GA+ +A+ L  N+TIT + L  N I ++GA A+A VL  N  +T L L +N IG 
Sbjct: 75  CIGPDGAKALANMLASNKTITILRLQSNRIGNEGAIALADVLCRNKSVTELRLHHNNIGL 134

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            GA+AL+ +L+ +  I  + L    IG  GA+ +A+ML+ + T++ L L  N + D    
Sbjct: 135 AGAEALANMLRTNATITHVSLFANSIGHKGAQALAEMLKDSTTLTHLKLGENAIGDA--- 191

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
                                        G + LA++ +  N  L  + L  N + D  A
Sbjct: 192 -----------------------------GVEALAKALETDNSTLQVLWLNCNGLSDSSA 222

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            A+A  L+ N+  AVT+L L  N +T  G + L
Sbjct: 223 VALANMLRRNK--AVTTLGLDINTITPGGGAEL 253



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 2/222 (0%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           +G   +A +L  N   + +    N I   G KA   +L SN  +  L L  N IG+EG  
Sbjct: 51  QGATVIAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQSNRIGNEGAI 110

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            L D+L  N  V  L+L   ++   GA+A+A +L+ N+ +  + L  N I + G  +LAE
Sbjct: 111 ALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANSIGHKGAQALAE 170

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMSGLS 355
            L +++T+  L L  N  G  G  ALAK LE  N +L+ L L+ N + D    AL + L 
Sbjct: 171 MLKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSDSSAVALANMLR 230

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             K  +  L +  N+I+  G   +   +    SL  + L  N
Sbjct: 231 RNKA-VTTLGLDINTITPGGGAELGASLHENHSLRVLTLSHN 271



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 2/205 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G +G   LA  L  N+T   +   +N I   G  A   VL  N ++  L L  N IG  
Sbjct: 76  IGPDGAKALANMLASNKTITILRLQSNRIGNEGAIALADVLCRNKSVTELRLHHNNIGLA 135

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + L ++L  NA +  + L +  +  +GA+A+AE+LK+++ L  L+L  N I  +G  +
Sbjct: 136 GAEALANMLRTNATITHVSLFANSIGHKGAQALAEMLKDSTTLTHLKLGENAIGDAGVEA 195

Query: 294 LAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           LA+AL  +NST++ L LN N      A ALA  L  NK++  L L  N+I   G   L +
Sbjct: 196 LAKALETDNSTLQVLWLNCNGLSDSSAVALANMLRRNKAVTTLGLDINTITPGGGAELGA 255

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAF 377
            L      L VL + +NS +   AF
Sbjct: 256 SLHENHS-LRVLTLSHNSTATARAF 279



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 1/152 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++ + + +   N G  G   LA  L  N T   VS  AN I   G +A   +L+ +  L 
Sbjct: 120 KSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANSIGHKGAQALAEMLKDSTTLT 179

Query: 222 TLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L L  N IGD GV+ L   L  DN+ ++ L L+   L D  A A+A +L+ N  +  L 
Sbjct: 180 HLKLGENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSDSSAVALANMLRRNKAVTTLG 239

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+ N I   G   L  +L EN ++R L L+ N
Sbjct: 240 LDINTITPGGGAELGASLHENHSLRVLTLSHN 271


>gi|326435101|gb|EGD80671.1| hypothetical protein PTSG_11700 [Salpingoeca sp. ATCC 50818]
          Length = 1594

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 1/242 (0%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           ++  N   + V     G+  +G +A    L+ N  LK L L  N IGD G   L ++L  
Sbjct: 68  AIANNTCRDSVRLRKVGLGDSGGRAVAEALKDNTCLKDLRLHNNSIGDAGAVALTEMLKH 127

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  +E+L L+   +   GA A+AE+LK N+ L +L L++N I  +G  +LAE L  N+TI
Sbjct: 128 NTTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHHNSIGDAGAVALAEMLKHNTTI 187

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             L+L+ N  G     ALA+ L+ N +L+ L+L  N I DEG  AL   L      L  L
Sbjct: 188 TVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHISDEGAVALAEML-KHNTTLTTL 246

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+ +N IS  GA  +AE +++  +L  + L+ N I   G   +  AL QNRT+ T+ +  
Sbjct: 247 DLQSNGISDDGAVALAEKLQHNTTLKALTLFSNSITPVGGAALGAALDQNRTLETLCMKK 306

Query: 425 NN 426
           N+
Sbjct: 307 NS 308



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 121/219 (55%), Gaps = 11/219 (5%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD G   +A+ALK N  +  + L  N+I   GA A+  +LK N+ +  L L  N IG  
Sbjct: 85  LGDSGGRAVAEALKDNTCLKDLRLHNNSIGDAGAVALTEMLKHNTTLEQLFLNGNSIGPG 144

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA AL+E+LK +  +  L L    IG +GA  +A+ML++N TI++L+L AN + D     
Sbjct: 145 GAVALAEMLKLNTTLTLLSLHHNSIGDAGAVALAEMLKHNTTITVLNLSANSIGDAAVVA 204

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
              +   ++ + +L       L IN++  +GA  LA+  K  N  LT++DL  N I DDG
Sbjct: 205 LAEVLKHNTTLKTL------YLSINHISDEGAVALAEMLKH-NTTLTTLDLQSNGISDDG 257

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
           A A+A+ L+ N    + +L L +N +T  G +AL  A D
Sbjct: 258 AVALAEKLQHN--TTLKALTLFSNSITPVGGAALGAALD 294



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 98/188 (52%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K       + ++G + G  G   LAE L  N T   +S   N I  AG  A   +
Sbjct: 121 LTEMLKHNTTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHHNSIGDAGAVALAEM 180

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  +  LNLS N IGD  V  L ++L  N  ++ L LS   + DEGA A+AE+LK+N
Sbjct: 181 LKHNTTITVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHISDEGAVALAEMLKHN 240

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L+L +N I   G  +LAE L  N+T+++L L  N    +G  AL   L+ N++L 
Sbjct: 241 TTLTTLDLQSNGISDDGAVALAEKLQHNTTLKALTLFSNSITPVGGAALGAALDQNRTLE 300

Query: 334 ELHLHGNS 341
            L +  NS
Sbjct: 301 TLCMKKNS 308



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 115/234 (49%), Gaps = 32/234 (13%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  A+A+ L+ N  L++L LH NSIGD G  AL   L      L  L +  NSI   
Sbjct: 86  GDSGGRAVAEALKDNTCLKDLRLHNNSIGDAGAVALTEMLK-HNTTLEQLFLNGNSIGPG 144

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   +L  ++L+ N IGD                             GA A
Sbjct: 145 GAVALAEMLKLNTTLTLLSLHHNSIGD----------------------------AGAVA 176

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A +LK N+ IT L+L+ N IG     AL+EVLK +  + TL L    I   GA  +A+M
Sbjct: 177 LAEMLKHNTTITVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHISDEGAVALAEM 236

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
           L++N T++ LDL++NG+ D+   G   L+       +LK +  +S  I  + GA
Sbjct: 237 LKHNTTLTTLDLQSNGISDD---GAVALAEKLQHNTTLKALTLFSNSITPVGGA 287



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 1/205 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   L E L +N T E++    N I   G  A   +L+ N  L  L+L  N IGD
Sbjct: 112 SIGDAGAVALTEMLKHNTTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHHNSIGD 171

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G   L ++L  N  +  L LS+  + D    A+AE+LK+N+ L+ L L+ N I   G  
Sbjct: 172 AGAVALAEMLKHNTTITVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHISDEGAV 231

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LAE L  N+T+ +L L  N     GA ALA+ L+ N +L+ L L  NSI   G  AL +
Sbjct: 232 ALAEMLKHNTTLTTLDLQSNGISDDGAVALAEKLQHNTTLKALTLFSNSITPVGGAALGA 291

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAF 377
            L   +  L  L +  NS +   AF
Sbjct: 292 ALDQNR-TLETLCMKKNSTTTARAF 315


>gi|290970865|ref|XP_002668286.1| predicted protein [Naegleria gruberi]
 gi|284081599|gb|EFC35542.1| predicted protein [Naegleria gruberi]
          Length = 368

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 56/340 (16%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E++  +S+D+ G   GDEG+ F++E     +    ++ + N I          + Q    
Sbjct: 72  EMKQLTSLDIGGNRIGDEGVKFISEM----KQLTSLNISENQIGDKEATFISEMKQ---- 123

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL-RD----EGAKAIAELLKNNS 274
           L +LN+  N IGDEGVK +         +E  QL S+D+ R+    EGAK I+E+ +   
Sbjct: 124 LTSLNIYNNRIGDEGVKSI---------IEMKQLKSLDIGRNQISVEGAKFISEMKQ--- 171

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L + NN ID  G  S++E       + SL++  N  G    +  AK +   K L  
Sbjct: 172 -LVSLNIYNNRID-EGVKSISEM----KQLTSLNIAENRIG----DKEAKFISEMKQLTS 221

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L ++ N IGDEG   +     S+  +L  L+I NN I  +G   + E     K L  +++
Sbjct: 222 LDIYNNRIGDEGAIFI-----SKMKQLTSLNIYNNRIGDEGVKSIIE----MKRLTSLDI 272

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IGDEG + I++ +KQ   + ++D+  N I  +G  +I+ + +    +TSL+++ N 
Sbjct: 273 GRNRIGDEGVKFISE-MKQ---LASLDISENRIGDEGVKSISEMKQ----LTSLNISENR 324

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IG +GAK++SE+ +      +L +G  QIG  G +F+++M
Sbjct: 325 IGDEGAKSISEMKRLK----SLDIGGNQIGDEGVKFISEM 360



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 186/378 (49%), Gaps = 64/378 (16%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D+     GDEG+  ++E     +    ++   N I   G+K+   + Q
Sbjct: 20  KFISEMKQLTSLDIYNNRIGDEGVKSISEM----KQLVSLNIYNNRIGDEGVKSIIEMKQ 75

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L +L++ GN IGDEGVK + ++      +  L +S   + D+ A  I+E+ +    
Sbjct: 76  ----LTSLDIGGNRIGDEGVKFISEM----KQLTSLNISENQIGDKEATFISEMKQ---- 123

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L + NN I   G  S    ++E   ++SL +  N     GA  +++     K L  L
Sbjct: 124 LTSLNIYNNRIGDEGVKS----IIEMKQLKSLDIGRNQISVEGAKFISE----MKQLVSL 175

Query: 336 HLHGNSIGDEGIRAL--MSGLSS------RKG-----------KLAVLDIGNNSISAKGA 376
           +++ N I DEG++++  M  L+S      R G           +L  LDI NN I  +GA
Sbjct: 176 NIYNNRI-DEGVKSISEMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGA 234

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                +I   K L  +N+Y N IGDEG + I +     + +T++D+G N I  +G   I+
Sbjct: 235 I----FISKMKQLTSLNIYNNRIGDEGVKSIIEM----KRLTSLDIGRNRIGDEGVKFIS 286

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            + +    + SLD++ N IG +G K++SE+ +      +L +   +IG  GA+ +++M R
Sbjct: 287 EMKQ----LASLDISENRIGDEGVKSISEMKQL----TSLNISENRIGDEGAKSISEMKR 338

Query: 497 YNNTISILDLRANGLRDE 514
             +    LD+  N + DE
Sbjct: 339 LKS----LDIGGNQIGDE 352



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 218/463 (47%), Gaps = 107/463 (23%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           ++  +S+ +SG   GD+   F++E     +    +    N I   G+K+   + Q    L
Sbjct: 1   MKQLTSLIISGNQIGDKEAKFISEM----KQLTSLDIYNNRIGDEGVKSISEMKQ----L 52

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNSI 275
            +LN+  N IGDEGVK +         +E  QL+S+D+      DEG K I+E+ +    
Sbjct: 53  VSLNIYNNRIGDEGVKSI---------IEMKQLTSLDIGGNRIGDEGVKFISEMKQ---- 99

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L ++ N I     T ++E                                 K L  L
Sbjct: 100 LTSLNISENQIGDKEATFISEM--------------------------------KQLTSL 127

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +++ N IGDEG+++++        +L  LDIG N IS +GA  ++E     K L+ +N+Y
Sbjct: 128 NIYNNRIGDEGVKSII-----EMKQLKSLDIGRNQISVEGAKFISE----MKQLVSLNIY 178

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N I DEG + I++ +KQ   +T++++  N I  K A  I+ + +    +TSLD+  N I
Sbjct: 179 NNRI-DEGVKSISE-MKQ---LTSLNIAENRIGDKEAKFISEMKQ----LTSLDIYNNRI 229

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           G +GA  +S++ +      +L +   +IG  G + + +M R    ++ LD+  N + DE 
Sbjct: 230 GDEGAIFISKMKQL----TSLNIYNNRIGDEGVKSIIEMKR----LTSLDIGRNRIGDE- 280

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                G+ F    I  +K +    +  N +  +G K +++      + LTS++++ N I 
Sbjct: 281 -----GVKF----ISEMKQLASLDISENRIGDEGVKSISEM-----KQLTSLNISENRIG 326

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           D+GA +I++  +      + SL++  N +   G   +++ K L
Sbjct: 327 DEGAKSISEMKR------LKSLDIGGNQIGDEGVKFISEMKQL 363



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 58/198 (29%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D+     GDEG  F+++                               
Sbjct: 211 KFISEMKQLTSLDIYNNRIGDEGAIFISKMK----------------------------- 241

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELL 270
               L +LN+  N IGDEGVK +         +E  +L+S+D+      DEG K I+E+ 
Sbjct: 242 ---QLTSLNIYNNRIGDEGVKSI---------IEMKRLTSLDIGRNRIGDEGVKFISEMK 289

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +    L  L+++ N I   G  S++E       + SL+++ N  G  GA ++++     K
Sbjct: 290 Q----LASLDISENRIGDEGVKSISEM----KQLTSLNISENRIGDEGAKSISE----MK 337

Query: 331 SLRELHLHGNSIGDEGIR 348
            L+ L + GN IGDEG++
Sbjct: 338 RLKSLDIGGNQIGDEGVK 355



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D+S    GDEG+  ++E     +    ++ + N I   G K+   + +
Sbjct: 283 KFISEMKQLASLDISENRIGDEGVKSISEM----KQLTSLNISENRIGDEGAKSISEMKR 338

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDI 241
               LK+L++ GN IGDEGVK + ++
Sbjct: 339 ----LKSLDIGGNQIGDEGVKFISEM 360


>gi|405952971|gb|EKC20714.1| NACHT, LRR and PYD domains-containing protein 5 [Crassostrea gigas]
          Length = 740

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 156/309 (50%), Gaps = 3/309 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +SG +  ++    L++ +       E+      ++   +      +Q +  L  L+L  N
Sbjct: 416 ISGHSLHEDRAKALSKVVSKYNCILELRIGKTQLSGRDVGHLSHAIQVSACLAVLDLRLN 475

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+EG + L   L  N+ + +L +SS  +  EG K +++ LK N+ +  ++++   I  
Sbjct: 476 SIGNEGARLLAVSLAKNSHIRQLNISSTGIDHEGCKNLSDALKLNNTITEIDMSFLEIGD 535

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG   L   L +N +I  L L  +    +G   L +G++ ++SL  L L  N IGD G+ 
Sbjct: 536 SGCICLGNMLKQNKSISKLRLRSSGISWIGCGILFEGVQQSRSLTVLDLSRNFIGDNGME 595

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            +   L+  K  L  L++ N  I++ G   +++ + + K+L  ++L +N I D G  K++
Sbjct: 596 MMCRHLNE-KCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDLSVNFIADAGVTKLS 654

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK--ALSEV 466
            AL++N++I T+ L    I + G S +  VL+ N  +T L L YN +G + +   A S+ 
Sbjct: 655 AALERNKSIKTLGLNMCGITNDGFSKMLDVLECNPTMTLLKLCYNRLGKEHSNPTATSDD 714

Query: 467 LKFHGNINT 475
           LK+   I T
Sbjct: 715 LKYRVRIVT 723



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 165/347 (47%), Gaps = 13/347 (3%)

Query: 170 SGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL--SG 227
           S + F  + LFF        + A  +S+ +  +++ G ++ D  +  N     +N+  SG
Sbjct: 369 SSKRFSRDSLFF--------KRASRLSYMS--VSSDGGRSSDDSVLINHGTPVINICISG 418

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           + + ++  K L  ++     +  L++    L       ++  ++ ++ L VL+L  N I 
Sbjct: 419 HSLHEDRAKALSKVVSKYNCILELRIGKTQLSGRDVGHLSHAIQVSACLAVLDLRLNSIG 478

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
             G   LA +L +NS IR L+++       G   L+  L+ N ++ E+ +    IGD G 
Sbjct: 479 NEGARLLAVSLAKNSHIRQLNISSTGIDHEGCKNLSDALKLNNTITEIDMSFLEIGDSGC 538

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
             L + L   K  ++ L + ++ IS  G   + E ++  +SL  ++L  N IGD G E +
Sbjct: 539 ICLGNMLKQNKS-ISKLRLRSSGISWIGCGILFEGVQQSRSLTVLDLSRNFIGDNGMEMM 597

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
              L +  ++  ++L    I S G + ++ V+  N  +T+LDL+ N I   G   LS  L
Sbjct: 598 CRHLNEKCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDLSVNFIADAGVTKLSAAL 657

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           + + +I TL L  C I   G   + D+L  N T+++L L  N L  E
Sbjct: 658 ERNKSIKTLGLNMCGITNDGFSKMLDVLECNPTMTLLKLCYNRLGKE 704



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 139/278 (50%), Gaps = 10/278 (3%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           + G+S+ ++  +AL S + S+   +  L IG   +S +   H++  I+    L  ++L +
Sbjct: 416 ISGHSLHEDRAKAL-SKVVSKYNCILELRIGKTQLSGRDVGHLSHAIQVSACLAVLDLRL 474

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG+EGA  +A +L +N  I  +++    I  +G   ++  LK N+ IT +D+++  IG
Sbjct: 475 NSIGNEGARLLAVSLAKNSHIRQLNISSTGIDHEGCKNLSDALKLNNTITEIDMSFLEIG 534

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             G   L  +LK + +I+ L+L    I   G   + + ++ + ++++LDL  N + D   
Sbjct: 535 DSGCICLGNMLKQNKSISKLRLRSSGISWIGCGILFEGVQQSRSLTVLDLSRNFIGD--- 591

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRDD 575
              NG+      +     ++  +L    +  + C   S  V+ N+ LT++DL+ N I D 
Sbjct: 592 ---NGMEMMCRHLNEKCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDLSVNFIADA 648

Query: 576 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           G   ++ AL+ N+ +    LN+    +T  G S + D 
Sbjct: 649 GVTKLSAALERNKSIKTLGLNMCG--ITNDGFSKMLDV 684



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 3/255 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+   + G+EG   LA SL  N    +++ ++ GI   G K     L+ N  +  +++S
Sbjct: 470 LDLRLNSIGNEGARLLAVSLAKNSHIRQLNISSTGIDHEGCKNLSDALKLNNTITEIDMS 529

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
              IGD G  CL ++L  N  + +L+L S  +   G   + E ++ +  L VL+L+ N I
Sbjct: 530 FLEIGDSGCICLGNMLKQNKSISKLRLRSSGISWIGCGILFEGVQQSRSLTVLDLSRNFI 589

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             +G   +   L E  ++  L+L      + G   L+  +  NK+L  L L  N I D G
Sbjct: 590 GDNGMEMMCRHLNEKCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDLSVNFIADAG 649

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           +  L + L  R   +  L +    I+  G   + + ++   ++  + L  N +G E +  
Sbjct: 650 VTKLSAAL-ERNKSIKTLGLNMCGITNDGFSKMLDVLECNPTMTLLKLCYNRLGKEHSNP 708

Query: 407 IA--DALKQNRTITT 419
            A  D LK    I T
Sbjct: 709 TATSDDLKYRVRIVT 723



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 2/184 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA-FDGVLQSNIALK 221
             + +DMS    GD G   L   L  N++  ++   ++GI+  G    F+GV QS  +L 
Sbjct: 522 TITEIDMSFLEIGDSGCICLGNMLKQNKSISKLRLRSSGISWIGCGILFEGVQQSR-SLT 580

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+LS N IGD G++ +C  L +   +  L L +  +   G   +++++ +N  L  L+L
Sbjct: 581 VLDLSRNFIGDNGMEMMCRHLNEKCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDL 640

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I  +G T L+ AL  N +I++L LN       G + +   LE N ++  L L  N 
Sbjct: 641 SVNFIADAGVTKLSAALERNKSIKTLGLNMCGITNDGFSKMLDVLECNPTMTLLKLCYNR 700

Query: 342 IGDE 345
           +G E
Sbjct: 701 LGKE 704


>gi|291384548|ref|XP_002708639.1| PREDICTED: NLR family, pyrin domain containing 14 [Oryctolagus
            cuniculus]
          Length = 1102

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 155/319 (48%), Gaps = 4/319 (1%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDG 212
            ++ F  + +    +D++G + GD G+  L E+L + +   + +   +  +T         
Sbjct: 721  ISNFLTQNQHLMHLDLTGSDIGDNGVKALCEALKHPRCKLQSLRLESCDLTTVCCLNISK 780

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N +L  LNLS N + D+GVK LC+ L      +ERL L S  L + G + ++  L 
Sbjct: 781  ALIRNQSLGFLNLSTNNLLDDGVKLLCEALRHPKCPLERLSLESCGLTEAGCEDLSLALI 840

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
             N+ L  L L +N++   G   +++AL     T++SL L   +  +L +  L+  L  NK
Sbjct: 841  TNTRLTHLCLTDNVLGDGGVKFMSDALQHPQCTLQSLVLRRCHLTSLSSRCLSTSLLYNK 900

Query: 331  SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            SLR L L  N + DEG + L          L  +++   +I++     +A  I N  ++ 
Sbjct: 901  SLRHLDLALNFLQDEGAKLLCDVFRHPSCSLQDVELVGCAITSACCLDLASAILNNPNIW 960

Query: 391  WINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L  N++ D G + + DAL+  N  I  + L    + S     ++  L  N  +  ++
Sbjct: 961  SMDLGNNNLQDGGVKILCDALRHPNCNIQKLGLAYCGLTSLCCRDLSSTLISNQRLRKIN 1020

Query: 450  LAYNPIGADGAKALSEVLK 468
            L  NP+G++G K L EVL+
Sbjct: 1021 LTQNPLGSEGIKKLCEVLR 1039



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 8/315 (2%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G       L  N  L  L+L+G+ IGD GVK LC+ L      ++ L+L S DL      
Sbjct: 717  GCLGISNFLTQNQHLMHLDLTGSDIGDNGVKALCEALKHPRCKLQSLRLESCDLTTVCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I++ L  N  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISKALIRNQSLGFLNLSTNNLLD-DGVKLLCEALRHPKCPLERLSLESCGLTEAGCEDL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  N  L  L L  N +GD G++ +   L   +  L  L +    +++  +  ++  
Sbjct: 836  SLALITNTRLTHLCLTDNVLGDGGVKFMSDALQHPQCTLQSLVLRRCHLTSLSSRCLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKD 441
            +   KSL  ++L +N + DEGA+ + D  +  + ++  ++L G  I S     +A  + +
Sbjct: 896  LLYNKSLRHLDLALNFLQDEGAKLLCDVFRHPSCSLQDVELVGCAITSACCLDLASAILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG--WCQIGASGAEFVADMLRYNN 499
            N  I S+DL  N +   G K L + L+ H N N  KLG  +C + +     ++  L  N 
Sbjct: 956  NPNIWSMDLGNNNLQDGGVKILCDALR-HPNCNIQKLGLAYCGLTSLCCRDLSSTLISNQ 1014

Query: 500  TISILDLRANGLRDE 514
             +  ++L  N L  E
Sbjct: 1015 RLRKINLTQNPLGSE 1029



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 39/301 (12%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G LG   ++  L  N+ L  L L G+ IGD G++AL   L   + KL  L + +  ++  
Sbjct: 717 GCLG---ISNFLTQNQHLMHLDLTGSDIGDNGVKALCEALKHPRCKLQSLRLESCDLTTV 773

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
              ++++ +   +SL ++NL  N++ D+G + + +AL+  +  +  + L    +   G  
Sbjct: 774 CCLNISKALIRNQSLGFLNLSTNNLLDDGVKLLCEALRHPKCPLERLSLESCGLTEAGCE 833

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVA 492
            ++  L  N+ +T L L  N +G  G K +S+ L+     + +L L  C + +  +  ++
Sbjct: 834 DLSLALITNTRLTHLCLTDNVLGDGGVKFMSDALQHPQCTLQSLVLRRCHLTSLSSRCLS 893

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA 552
             L YN ++  LDL  N L+DE                                GAK L 
Sbjct: 894 TSLLYNKSLRHLDLALNFLQDE--------------------------------GAKLLC 921

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             F+  + +L  ++L    I       +A A+  N ++   S++L NN L   G   L D
Sbjct: 922 DVFRHPSCSLQDVELVGCAITSACCLDLASAILNNPNIW--SMDLGNNNLQDGGVKILCD 979

Query: 613 A 613
           A
Sbjct: 980 A 980



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 60/258 (23%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L + +   E +S  + G+T AG +     L +N  L  L L
Sbjct: 791  LNLSTNNLLDDGVKLLCEALRHPKCPLERLSLESCGLTEAGCEDLSLALITNTRLTHLCL 850

Query: 226  SGNPIGDEGVK-----------------------------CLCDILVDNAGVERLQLSSV 256
            + N +GD GVK                             CL   L+ N  +  L L+  
Sbjct: 851  TDNVLGDGGVKFMSDALQHPQCTLQSLVLRRCHLTSLSSRCLSTSLLYNKSLRHLDLALN 910

Query: 257  DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--- 312
             L+DEGAK + ++ ++ S  L+ +EL    I  +    LA A+L N  I S+ L  N   
Sbjct: 911  FLQDEGAKLLCDVFRHPSCSLQDVELVGCAITSACCLDLASAILNNPNIWSMDLGNNNLQ 970

Query: 313  ------------------------YGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                                    Y G  +L    L+  L  N+ LR+++L  N +G EG
Sbjct: 971  DGGVKILCDALRHPNCNIQKLGLAYCGLTSLCCRDLSSTLISNQRLRKINLTQNPLGSEG 1030

Query: 347  IRALMSGLSSRKGKLAVL 364
            I+ L   L S + KL  L
Sbjct: 1031 IKKLCEVLRSPQCKLQTL 1048


>gi|301089094|ref|XP_002894888.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262105397|gb|EEY63449.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 436

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 174/380 (45%), Gaps = 47/380 (12%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS R+ GD     LA S+  N   EE+  + + +   G++AF   L +N  LK L+L   
Sbjct: 28  MSTRSIGDSDFVKLASSISSNTLLEELYLSGHQLGPLGLQAFADCLATNSTLKHLSLGSE 87

Query: 229 PIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            +GDE V+ LC  L  N  +G++   L    L   GA A+AELLK N  L  + L+ N I
Sbjct: 88  KLGDEAVQVLCAGLARNTQSGLQNWDLEFKSLGANGAAAVAELLKTNKSLTTVSLSRNQI 147

Query: 287 DYSGFTSLAEALLEN--STIRSLHLN--GNYGGALGA----------------------- 319
              G   LA+ L EN  S ++ L++   G  G  LG                        
Sbjct: 148 GDEGVEKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATLVEKETCSLSTIQLSFNTLE 207

Query: 320 -------NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                  +ALAK    NKS+ +L L    + D+ + AL + L  +   L  +D+ +N ++
Sbjct: 208 SATSTFFDALAK----NKSVTKLQLKECKLSDQHVAALSAAL-KQNTTLVEIDLSDNELT 262

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKG 431
                 +AE +   K+L  + +  N   DEGA  +AD L   N T+T +D+G N + S G
Sbjct: 263 QTSCASLAEGLCENKTLKILRINNNKCLDEGAALLADVLVTNNTTLTYLDMGNNGLTSVG 322

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
            + +   LK  S +T L L  N +G +G   L   L  +  I T  +G  Q+  + +  +
Sbjct: 323 MTPL---LKAQS-LTQLHLFNNKLG-EGLSELLPALLANAVIETFGIGANQLHEALSVTM 377

Query: 492 ADMLRYNNTISILDLRANGL 511
            D L  + ++  L++  N L
Sbjct: 378 LDALHSHPSLKTLEMGGNTL 397



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 37/314 (11%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGV 213
           E  K  ++ ++V +S    GDEG+  LA+ L  N  +  +E++    GI+ +G+     +
Sbjct: 129 ELLKTNKSLTTVSLSRNQIGDEGVEKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATL 188

Query: 214 LQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           ++    +L T+ LS N + +       D L  N  V +LQL    L D+   A++  LK 
Sbjct: 189 VEKETCSLSTIQLSFNTL-ESATSTFFDALAKNKSVTKLQLKECKLSDQHVAALSAALKQ 247

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  ++L++N +  +   SLAE L EN T++ L +N                  NK L
Sbjct: 248 NTTLVEIDLSDNELTQTSCASLAEGLCENKTLKILRIN-----------------NNKCL 290

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
                      DEG   L   L +    L  LD+GNN +++ G   +   +K  +SL  +
Sbjct: 291 -----------DEGAALLADVLVTNNTTLTYLDMGNNGLTSVG---MTPLLK-AQSLTQL 335

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L+ N +G EG  ++  AL  N  I T  +G N +H   +  +   L  +  + +L++  
Sbjct: 336 HLFNNKLG-EGLSELLPALLANAVIETFGIGANQLHEALSVTMLDALHSHPSLKTLEMGG 394

Query: 453 NPIGADGAKALSEV 466
           N +G  G  AL ++
Sbjct: 395 NTLGIAGHDALDKL 408



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 33/261 (12%)

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I  S F  LA ++  N+ +  L+L+G+  G LG  A A  L  N +L+ L L    +GDE
Sbjct: 33  IGDSDFVKLASSISSNTLLEELYLSGHQLGPLGLQAFADCLATNSTLKHLSLGSEKLGDE 92

Query: 346 GIRALMSGLS-SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            ++ L +GL+ + +  L   D+   S+ A GA  VAE +K  KSL  ++L  N IGDEG 
Sbjct: 93  AVQVLCAGLARNTQSGLQNWDLEFKSLGANGAAAVAELLKTNKSLTTVSLSRNQIGDEGV 152

Query: 405 EKIADALKQNR-------------------------------TITTIDLGGNNIHSKGAS 433
           EK+A  L +N                                +++TI L  N + S   S
Sbjct: 153 EKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATLVEKETCSLSTIQLSFNTLES-ATS 211

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
                L  N  +T L L    +      ALS  LK +  +  + L   ++  +    +A+
Sbjct: 212 TFFDALAKNKSVTKLQLKECKLSDQHVAALSAALKQNTTLVEIDLSDNELTQTSCASLAE 271

Query: 494 MLRYNNTISILDLRANGLRDE 514
            L  N T+ IL +  N   DE
Sbjct: 272 GLCENKTLKILRINNNKCLDE 292



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 144/341 (42%), Gaps = 46/341 (13%)

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGN-SIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           +G   G + L + L   K+ R L++    SIGD     L S +SS    L  L +  + +
Sbjct: 3   WGKKAGVDDLLQKLTNPKTARSLYVMSTRSIGDSDFVKLASSISSNT-LLEELYLSGHQL 61

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT--ITTIDLGGNNIHS 429
              G    A+ +    +L  ++L    +GDE  + +   L +N    +   DL   ++ +
Sbjct: 62  GPLGLQAFADCLATNSTLKHLSLGSEKLGDEAVQVLCAGLARNTQSGLQNWDLEFKSLGA 121

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA+A+A +LK N  +T++ L+ N IG +G + L++ L  +      +L   ++G SG+ 
Sbjct: 122 NGAAAVAELLKTNKSLTTVSLSRNQIGDEGVEKLAKGLSENAQSGVKELNVTEVGISGSG 181

Query: 490 F--VADMLRYNN-TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL--CINY 544
              +A ++     ++S + L  N L        +  S F  A+   K +    L  C   
Sbjct: 182 LGHLATLVEKETCSLSTIQLSFNTLE-------SATSTFFDALAKNKSVTKLQLKECKLS 234

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIR----------------------------DDG 576
            Q    L+ + K  N  L  IDL+ NE+                             D+G
Sbjct: 235 DQHVAALSAALKQ-NTTLVEIDLSDNELTQTSCASLAEGLCENKTLKILRINNNKCLDEG 293

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
           A  +A  L  N +  +T L++ NN LT  G + L  A+ L 
Sbjct: 294 AALLADVLVTN-NTTLTYLDMGNNGLTSVGMTPLLKAQSLT 333



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 36/201 (17%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++ + + +      D+ +  L+ +L  N T  E+  + N +T     +    L  N  LK
Sbjct: 221 KSVTKLQLKECKLSDQHVAALSAALKQNTTLVEIDLSDNELTQTSCASLAEGLCENKTLK 280

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI--AELLKNNSILRVL 279
            L ++ N   DEG   L D+LV N       L+ +D+ + G  ++    LLK  S+ ++ 
Sbjct: 281 ILRINNNKCLDEGAALLADVLVTN----NTTLTYLDMGNNGLTSVGMTPLLKAQSLTQLH 336

Query: 280 ELNNNMIDYSGFTSLAEALLENSTI----------------------------RSLHLNG 311
             NN + +  G + L  ALL N+ I                            ++L + G
Sbjct: 337 LFNNKLGE--GLSELLPALLANAVIETFGIGANQLHEALSVTMLDALHSHPSLKTLEMGG 394

Query: 312 NYGGALGANALAKGLEGNKSL 332
           N  G  G +AL K  E N+ L
Sbjct: 395 NTLGIAGHDALDKLKEANRGL 415


>gi|156354969|ref|XP_001623451.1| predicted protein [Nematostella vectensis]
 gi|156210151|gb|EDO31351.1| predicted protein [Nematostella vectensis]
          Length = 1189

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 140/281 (49%), Gaps = 34/281 (12%)

Query: 236  KCLCDILVDNAGVE--RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            K + ++L  N  +   RL+ +S +   E   ++ + LKNNS L  + ++ N +  +  + 
Sbjct: 824  KAMANVLTRNKSLRYLRLRWNSDEHEYEMGTSVVKSLKNNSTLSAIHIDFNSLGDACASE 883

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
            LAE L++N+++  ++++G Y G  G  ++AK L+ N ++R L + G ++  E  RAL   
Sbjct: 884  LAEVLVDNTSLNDIYISGEYLGDAGVASIAKALKVNTTVRALGIIGGNMTPEAGRAL--- 940

Query: 354  LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                       E +K+  ++  ++L+  +IGD GA  IA  L Q
Sbjct: 941  --------------------------GEMLKHNTTITCLSLFCGNIGDSGALCIASGLSQ 974

Query: 414  NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            N T+  I +  + I + G SA+A+V+++   +T LDL+ N IG  GAK + +V++    +
Sbjct: 975  NTTLEKIRIENSCIGATGVSALAKVIQN---VTYLDLSMNIIGTKGAKPIVKVIENSCKL 1031

Query: 474  NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
              L++  C I   G   +A  L  N  +  L +   G+ DE
Sbjct: 1032 KYLRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDE 1072



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            L++N  L  +++  N +GD     L ++LVDN  +  + +S   L D G  +IA+ LK N
Sbjct: 860  LKNNSTLSAIHIDFNSLGDACASELAEVLVDNTSLNDIYISGEYLGDAGVASIAKALKVN 919

Query: 274  SILRVLE-LNNNMIDYSGFTSLAEALLENSTIRSLHL-NGNYGGALGANALAKGLEGNKS 331
            + +R L  +  NM   +G  +L E L  N+TI  L L  GN G + GA  +A GL  N +
Sbjct: 920  TTVRALGIIGGNMTPEAG-RALGEMLKHNTTITCLSLFCGNIGDS-GALCIASGLSQNTT 977

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L ++ +  + IG  G+ AL   + +    +  LD+  N I  KGA  + + I+N   L +
Sbjct: 978  LEKIRIENSCIGATGVSALAKVIQN----VTYLDLSMNIIGTKGAKPIVKVIENSCKLKY 1033

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            + +   +I   G   IA AL +N  +  + +    I  +G   +AR +  N  +  L + 
Sbjct: 1034 LRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTIT 1093

Query: 452  YNPIGADGAKALSEVLKFHGNINTL 476
            YN I   G +A+ E      ++N L
Sbjct: 1094 YNKISEKGKRAIIEACAKSQSLNHL 1118



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 4/227 (1%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + + + +SG   GD G+  +A++L  N T   +      +T    +A   +L+ N  +  
Sbjct: 893  SLNDIYISGEYLGDAGVASIAKALKVNTTVRALGIIGGNMTPEAGRALGEMLKHNTTITC 952

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L    IGD G  C+   L  N  +E++++ +  +   G  A+A++++N   +  L+L+
Sbjct: 953  LSLFCGNIGDSGALCIASGLSQNTTLEKIRIENSCIGATGVSALAKVIQN---VTYLDLS 1009

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N+I   G   + + +  +  ++ L ++       G   +A+ L  N +L EL +    I
Sbjct: 1010 MNIIGTKGAKPIVKVIENSCKLKYLRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGI 1069

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             DEG+  L   ++  K  L VL I  N IS KG   + E     +SL
Sbjct: 1070 DDEGMCELARSVAKNKS-LQVLTITYNKISEKGKRAIIEACAKSQSL 1115



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 130/282 (46%), Gaps = 11/282 (3%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
              S++ +   + GD     LAE L  N +  ++  +   +  AG+ +    L+ N  ++ 
Sbjct: 865  TLSAIHIDFNSLGDACASELAEVLVDNTSLNDIYISGEYLGDAGVASIAKALKVNTTVRA 924

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L + G  +  E  + L ++L  N  +  L L   ++ D GA  IA  L  N+ L  + + 
Sbjct: 925  LGIIGGNMTPEAGRALGEMLKHNTTITCLSLFCGNIGDSGALCIASGLSQNTTLEKIRIE 984

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N+ I  +G ++LA+ +++N T   L L+ N  G  GA  + K +E +  L+ L +   +I
Sbjct: 985  NSCIGATGVSALAK-VIQNVTY--LDLSMNIIGTKGAKPIVKVIENSCKLKYLRIDHCNI 1041

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
               G+R +   L S+   L  L +    I  +G   +A  +   KSL  + +  N I ++
Sbjct: 1042 DVFGVRDIAQAL-SKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNKISEK 1100

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            G   I +A  +++++       N++  +    +   LK +SV
Sbjct: 1101 GKRAIIEACAKSQSL-------NHLFHENDPILNTCLKPHSV 1135



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 151/354 (42%), Gaps = 74/354 (20%)

Query: 294  LAEALLENSTIRSLHL--------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            L E L  +S+++ L +        +GN+  A+ AN L +    NKSLR L L  NS   E
Sbjct: 795  LTEVLAASSSVQKLGIFFGSSPFHDGNFEKAM-ANVLTR----NKSLRYLRLRWNSDEHE 849

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
                               ++G +         V + +KN  +L  I++  N +GD  A 
Sbjct: 850  ------------------YEMGTS---------VVKSLKNNSTLSAIHIDFNSLGDACAS 882

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            ++A+ L  N ++  I + G  +   G ++IA+ LK N+ + +L +    +  +  +AL E
Sbjct: 883  ELAEVLVDNTSLNDIYISGEYLGDAGVASIAKALKVNTTVRALGIIGGNMTPEAGRALGE 942

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            +LK +  I  L L    IG SGA  +A  L  N T+  + +  +      C G  G+S  
Sbjct: 943  MLKHNTTITCLSLFCGNIGDSGALCIASGLSQNTTLEKIRIENS------CIGATGVSAL 996

Query: 526  HSAIYSLKHM------------------LFYSLCINYLQGAKCLAQSFKV--------VN 559
               I ++ ++                  +  S  + YL+   C    F V         N
Sbjct: 997  AKVIQNVTYLDLSMNIIGTKGAKPIVKVIENSCKLKYLRIDHCNIDVFGVRDIAQALSKN 1056

Query: 560  EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              L  + +A   I D+G   +A+++  N+ + V  L +  N +++ G+ A+ +A
Sbjct: 1057 TNLEELSVACAGIDDEGMCELARSVAKNKSLQV--LTITYNKISEKGKRAIIEA 1108



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 3/215 (1%)

Query: 144  GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
            G +  E+ + L E  K     + + +   N GD G   +A  L  N T E++    + I 
Sbjct: 930  GNMTPEAGRALGEMLKHNTTITCLSLFCGNIGDSGALCIASGLSQNTTLEKIRIENSCIG 989

Query: 204  AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
            A G+ A   V+Q+   +  L+LS N IG +G K +  ++ ++  ++ L++   ++   G 
Sbjct: 990  ATGVSALAKVIQN---VTYLDLSMNIIGTKGAKPIVKVIENSCKLKYLRIDHCNIDVFGV 1046

Query: 264  KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
            + IA+ L  N+ L  L +    ID  G   LA ++ +N +++ L +  N     G  A+ 
Sbjct: 1047 RDIAQALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNKISEKGKRAII 1106

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            +    ++SL  L    + I +  ++     L SR+
Sbjct: 1107 EACAKSQSLNHLFHENDPILNTCLKPHSVCLHSRE 1141


>gi|421897505|ref|ZP_16327873.1| lrr-gala family type III effector protein (gala 4) [Ralstonia
           solanacearum MolK2]
 gi|206588711|emb|CAQ35674.1| lrr-gala family type III effector protein (gala 4) [Ralstonia
           solanacearum MolK2]
          Length = 460

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 152/301 (50%), Gaps = 43/301 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++     GD G+   A     N+    ++ ++NGI   G++A    L +N  + TL
Sbjct: 193 LTTLNLRRNAIGDAGVAAFAR----NKKLTTLNVSSNGIGPVGVRA----LAANTTITTL 244

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N IGDEG + L      N  + RL  S   +  EG +A+A     ++ L  L+L+ 
Sbjct: 245 DISNNEIGDEGARALA----SNTALTRLDASDCGIGPEGTQALA----TSTTLTSLDLSY 296

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I+  G     EAL  N+T+R+LH  GN  G   A  LA     N +L  L+L  N+IG
Sbjct: 297 NAIEAEGV----EALGRNTTLRTLHACGNELGHREAELLA----ANTTLTVLNLSSNAIG 348

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G RA  +  +     L  L++ NN I       V E+  N K L  ++L  N IGD  
Sbjct: 349 NAGARAFGANTT-----LVELNLSNNGIE-----RVPEWADNGK-LTTLDLSNNQIGDTA 397

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ +A     + T+TT+++G N I   GA A+A     N+ +T+L+++ N IG  G  AL
Sbjct: 398 AQVLA----ASHTLTTLNVGSNRIGDTGACALA----GNTTLTTLNVSLNRIGKAGMLAL 449

Query: 464 S 464
           +
Sbjct: 450 A 450



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 46/288 (15%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L G+ +L  L+L  N+IGD G+ A      +R  KL  L++ +N I   G   +A  
Sbjct: 184 ARLLAGHPTLTTLNLRRNAIGDAGVAAF-----ARNKKLTTLNVSSNGIGPVGVRALAAN 238

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                ++  +++  N+IGDEGA     AL  N  +T +D     I  +G  A+A     +
Sbjct: 239 T----TITTLDISNNEIGDEGAR----ALASNTALTRLDASDCGIGPEGTQALA----TS 286

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLDL+YN I A+G +AL      +  + TL     ++G   AE +A     N T++
Sbjct: 287 TTLTSLDLSYNAIEAEGVEALGR----NTTLRTLHACGNELGHREAELLA----ANTTLT 338

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
           +L+L +N +      G  G   F +       ++  +L  N ++     A + K     L
Sbjct: 339 VLNLSSNAI------GNAGARAFGANTT----LVELNLSNNGIERVPEWADNGK-----L 383

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           T++DL+ N+I D      AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 384 TTLDLSNNQIGDTA----AQVLAASH--TLTTLNVGSNRIGDTGACAL 425


>gi|300697280|ref|YP_003747941.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
            solanacearum CFBP2957]
 gi|299074004|emb|CBJ53541.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
            solanacearum CFBP2957]
          Length = 1051

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 211/472 (44%), Gaps = 96/472 (20%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            LSG TG    E+   L + A+  R  +S+D+S    GD  +  LA S         ++ +
Sbjct: 654  LSGCTGAAVSEAG--LADLAR--RPLASLDLSRTRIGDREVQALASSASLTS----LNLS 705

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N I  AG +A    L  N  L +LN+S NPIGD GV+ L      +  +  L+L  + +
Sbjct: 706  GNRIGDAGAQA----LGRNTVLTSLNVSANPIGDTGVQALAG----SRSLTSLELRGIRI 757

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
             + G  A+A    +N++LR L++++N +       LA     N T+ SL  N + G    
Sbjct: 758  GEAGIAALA----SNTVLRSLDISSNDLSEQSAAELAR----NQTLTSLKAN-DCGLT-- 806

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +G   
Sbjct: 807  -NGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQGL-- 858

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
                ++  ++L  +++     GD GA      L +NR +T++ LG N I S GA      
Sbjct: 859  --RPLELSRTLTSLDVSRIGCGDRGALL----LSKNRALTSLKLGFNGIGSAGAQG---- 908

Query: 439  LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            L  N  + SLDL  N I    A AL+      G + +L +  C++    A  +A+ L   
Sbjct: 909  LTANRTLISLDLRGNTIDVAAATALAHT----GRLGSLNVSDCKLDDEAASALAESL--- 961

Query: 499  NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
             T++ LD+  N L                                  Q A+ LA      
Sbjct: 962  -TLTALDVSMNRLSS--------------------------------QAARALAG----- 983

Query: 559  NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            N  LTS++++ N I  DGA A+A      E  ++T L+   N + + G  AL
Sbjct: 984  NATLTSLNISHNHIGPDGAQALA------ESTSLTFLDARANDIGEAGARAL 1029



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 173/413 (41%), Gaps = 111/413 (26%)

Query: 276  LRVLELNNNMIDYSGFT--SLAEALLENSTIR---SLHLNGNYGGALGANALAKGLEGNK 330
            LR L  +   +D SG T  +++EA L +   R   SL L+    G     ALA     + 
Sbjct: 642  LRALPPSVRHLDLSGCTGAAVSEAGLADLARRPLASLDLSRTRIGDREVQALAS----SA 697

Query: 331  SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA---------- 380
            SL  L+L GN IGD G +AL      R   L  L++  N I   G   +A          
Sbjct: 698  SLTSLNLSGNRIGDAGAQAL-----GRNTVLTSLNVSANPIGDTGVQALAGSRSLTSLEL 752

Query: 381  ----------EYIKNCKSLLWINLYMNDIGDEGAEKIA-----DALKQN----------- 414
                        + +   L  +++  ND+ ++ A ++A      +LK N           
Sbjct: 753  RGIRIGEAGIAALASNTVLRSLDISSNDLSEQSAAELARNQTLTSLKANDCGLTNGMAQQ 812

Query: 415  ----RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL------- 463
                R++ T+++G N+I   G  AIAR    N+ + +L+L++NPI   G + L       
Sbjct: 813  LARIRSLRTLEVGSNSIGDTGVLAIAR----NASLRTLNLSHNPITLQGLRPLELSRTLT 868

Query: 464  -------------SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
                         + +L  +  + +LKLG+  IG++GA+     L  N T+  LDLR N 
Sbjct: 869  SLDVSRIGCGDRGALLLSKNRALTSLKLGFNGIGSAGAQG----LTANRTLISLDLRGN- 923

Query: 511  LRDEVCSGCNGLSFFHSAIYSLKHM-----LFYSLCINYLQGAKCLAQSFKVVNEALTSI 565
                        +   +A  +L H      L  S C    + A  LA+S       LT++
Sbjct: 924  ------------TIDVAAATALAHTGRLGSLNVSDCKLDDEAASALAESLT-----LTAL 966

Query: 566  DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 618
            D++ N +    A A+A       +  +TSLN+++N +   G  AL ++  L +
Sbjct: 967  DVSMNRLSSQAARALAG------NATLTSLNISHNHIGPDGAQALAESTSLTF 1013



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 42/269 (15%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           +E L ++  D+ D GA+    LL  N  LR L    N  +     + A AL E+  + SL
Sbjct: 155 LESLNVAGADIGDGGAR----LLAANPSLRAL----NAANGGIGAAGARALAESPVLTSL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N  G  GA ALA    G++SL  L +    + D G RAL    +     L  LD+G
Sbjct: 207 DLSQNGIGDEGARALA----GSRSLTNLAVLNCLVTDVGARALAGNRT-----LTALDLG 257

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           N           A Y +            N+I  +GA     AL QNR++T++ + GN  
Sbjct: 258 NLITETGNELEQAAYDRTA----------NEITAQGAW----ALAQNRSLTSLSIQGNLC 303

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              G  A+A     +S +TSL++AY  +  + AK L+     +  + +L + W   G   
Sbjct: 304 GDAGVQALA----GSSTLTSLNVAYTDMTLESAKELAR----NPVLTSLSVRW-NYGLGD 354

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVC 516
           A  V   L  + ++++LD R+ G+ +   
Sbjct: 355 AGVVE--LAKSPSLTLLDARSTGMSERTA 381



 Score = 39.7 bits (91), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 30/187 (16%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G + GD G   LA        A     A N        A    L  +  L +L
Sbjct: 155 LESLNVAGADIGDGGARLLA--------ANPSLRALNAANGGIGAAGARALAESPVLTSL 206

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IGDEG + L      +  +  L + +  + D GA+A+A     N  L  L+L N
Sbjct: 207 DLSQNGIGDEGARALAG----SRSLTNLAVLNCLVTDVGARALA----GNRTLTALDLGN 258

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +I  +G   L +A  + +         N   A GA ALA+    N+SL  L + GN  G
Sbjct: 259 -LITETG-NELEQAAYDRT--------ANEITAQGAWALAQ----NRSLTSLSIQGNLCG 304

Query: 344 DEGIRAL 350
           D G++AL
Sbjct: 305 DAGVQAL 311


>gi|118359635|ref|XP_001013056.1| Protein kinase domain containing protein [Tetrahymena thermophila]
 gi|89294823|gb|EAR92811.1| Protein kinase domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1349

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 169/333 (50%), Gaps = 21/333 (6%)

Query: 195  VSFAANGITAAGIKAF-DGV-LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
            +    N I A G K    G+ L  NI   TL+L GN IGD G K L  ++     +  L 
Sbjct: 776  LDLQGNSIGAQGAKYLATGISLCKNITNLTLDLQGNSIGDVGAKHLSTVIEQCKNITSLT 835

Query: 253  LSSVD--LRDEGAKAIAELL---KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            L   D  + D+G K +A  +   +N + L+ L+L+ N I   G   LA  + +   I +L
Sbjct: 836  LDLWDNSIGDKGVKDLATGIAQCENITSLK-LDLSFNSIGAQGAKDLATGIAQCKNITNL 894

Query: 308  HLN--GNYGGALGANALAKGLEGNKSLRELHLH--GNSIGDEGIRALMSGLSSRKGKLAV 363
             L+  GN  G  GA  LA G+E  K++  L L    NSIGD+G + L +G+   K    +
Sbjct: 895  MLDLQGNSIGDEGAKDLALGIEQCKNITSLTLDLWRNSIGDQGSKDLATGIEQCKNITCL 954

Query: 364  -LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM--NDIGDEGAEKIADALKQNRTITT- 419
             L +  NSI A G   +A  I  CK++  + L++  N IGD+GA+ +   ++Q + IT+ 
Sbjct: 955  TLYLQRNSIYAYGVKFLATAIAQCKNITSLTLHLSRNSIGDQGAKYLDTGIEQCKNITSL 1014

Query: 420  -IDLGGNNIHSKGASAIARVLKDNSVITS--LDLAYNPIGADGAKALSEVLKFHGNIN-- 474
             +DL  N+I ++GA  +A+ +     IT+  LDL  N IG +GAK L+  +    NI   
Sbjct: 1015 MLDLSDNSIDAQGAKDLAKGISQCKNITNLMLDLQQNSIGDEGAKDLATGIAQSKNITCL 1074

Query: 475  TLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            TL L    IG  G++++A  +     I+ L L 
Sbjct: 1075 TLDLWRNSIGDQGSKYLATGIEQCKNITSLTLH 1107



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 160/332 (48%), Gaps = 49/332 (14%)

Query: 167  VDMSGRNFGDEGLFFLAE--SLGYNQTAEEVSFAANGITAAGIKAFDGVLQS--NIALKT 222
            +D+ G + G +G  +LA   SL  N T   +    N I   G K    V++   NI   T
Sbjct: 776  LDLQGNSIGAQGAKYLATGISLCKNITNLTLDLQGNSIGDVGAKHLSTVIEQCKNITSLT 835

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLS---------------------------S 255
            L+L  N IGD+GVK L   +     +  L+L                             
Sbjct: 836  LDLWDNSIGDKGVKDLATGIAQCENITSLKLDLSFNSIGAQGAKDLATGIAQCKNITNLM 895

Query: 256  VDLR-----DEGAKAIA---ELLKNNSILRVLELNNNMIDYSGFTSLAEAL--LENSTIR 305
            +DL+     DEGAK +A   E  KN + L  L+L  N I   G   LA  +   +N T  
Sbjct: 896  LDLQGNSIGDEGAKDLALGIEQCKNITSL-TLDLWRNSIGDQGSKDLATGIEQCKNITCL 954

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLREL--HLHGNSIGDEGIRALMSGLSSRKGKLA- 362
            +L+L  N   A G   LA  +   K++  L  HL  NSIGD+G + L +G+   K   + 
Sbjct: 955  TLYLQRNSIYAYGVKFLATAIAQCKNITSLTLHLSRNSIGDQGAKYLDTGIEQCKNITSL 1014

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTIT-- 418
            +LD+ +NSI A+GA  +A+ I  CK++  L ++L  N IGDEGA+ +A  + Q++ IT  
Sbjct: 1015 MLDLSDNSIDAQGAKDLAKGISQCKNITNLMLDLQQNSIGDEGAKDLATGIAQSKNITCL 1074

Query: 419  TIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            T+DL  N+I  +G+  +A  ++    ITSL L
Sbjct: 1075 TLDLWRNSIGDQGSKYLATGIEQCKNITSLTL 1106



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 140/297 (47%), Gaps = 44/297 (14%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA-VLDIGNNSISAKGAFHVAEYIKNCK 387
           N ++  + L  NSI D   + L +G++  K  ++ +L +  NSI A+GA  +A  I  CK
Sbjct: 710 NYNIVTIDLEENSIRDADAKDLATGIAQCKNIISLMLHLSQNSIGAQGAKDLATGIAQCK 769

Query: 388 SL--LWINLYMNDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLKDNS 443
           ++  L ++L  N IG +GA+ +A  +   + IT  T+DL GN+I   GA  ++ V++   
Sbjct: 770 NITNLMLDLQGNSIGAQGAKYLATGISLCKNITNLTLDLQGNSIGDVGAKHLSTVIEQCK 829

Query: 444 VITS--LDLAYNPIGADGAKALSEVLKFHGNINTLK--LGWCQIGASGAEFVADMLRYNN 499
            ITS  LDL  N IG  G K L+  +    NI +LK  L +  IGA GA+ +A  +    
Sbjct: 830 NITSLTLDLWDNSIGDKGVKDLATGIAQCENITSLKLDLSFNSIGAQGAKDLATGIAQCK 889

Query: 500 TIS--ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF-K 556
            I+  +LDL+ N + DE                                GAK LA    +
Sbjct: 890 NITNLMLDLQGNSIGDE--------------------------------GAKDLALGIEQ 917

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             N    ++DL  N I D G+  +A  ++  +++   +L L  N +  +G   L  A
Sbjct: 918 CKNITSLTLDLWRNSIGDQGSKDLATGIEQCKNITCLTLYLQRNSIYAYGVKFLATA 974



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSL--LWINL 394
             GNSIGDEG + L +G++  K    + LD+  NSI A+GA  +A  I   K++  L ++L
Sbjct: 1202 RGNSIGDEGAKDLATGIAQCKNITNLTLDLSGNSIGAQGAKDLATGISQRKNITSLTLHL 1261

Query: 395  YMNDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
              N IGDEGA+ +A  + Q + IT  T+DL  NNI ++    +   +     ITSL L
Sbjct: 1262 QRNSIGDEGAKDLATTIVQCKNITSLTLDLLLNNIDAQNIKNLRTAIALCENITSLKL 1319



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 397  NDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLKDNSVITS--LDLAY 452
            N IGDEGA+ +A  + Q + IT  T+DL GN+I ++GA  +A  +     ITS  L L  
Sbjct: 1204 NSIGDEGAKDLATGIAQCKNITNLTLDLSGNSIGAQGAKDLATGISQRKNITSLTLHLQR 1263

Query: 453  NPIGADGAKALSEVLKFHGNINTLKL 478
            N IG +GAK L+  +    NI +L L
Sbjct: 1264 NSIGDEGAKDLATTIVQCKNITSLTL 1289



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 11/112 (9%)

Query: 297  ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL--HLHGNSIGDEGIRALMSGL 354
            A  +N T  +L L+GN  GA GA  LA G+   K++  L  HL  NSIGDEG + L + +
Sbjct: 1219 AQCKNITNLTLDLSGNSIGAQGAKDLATGISQRKNITSLTLHLQRNSIGDEGAKDLATTI 1278

Query: 355  SSRKGKLAV-LDIGNNSISAKG------AFHVAEYIKNCKSLLW--INLYMN 397
               K   ++ LD+  N+I A+       A  + E I + K  LW  +NL+++
Sbjct: 1279 VQCKNITSLTLDLLLNNIDAQNIKNLRTAIALCENITSLKLHLWQKLNLFID 1330


>gi|114612656|ref|XP_001165528.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 isoform 2 [Pan troglodytes]
 gi|410210458|gb|JAA02448.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410265490|gb|JAA20711.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410292634|gb|JAA24917.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410332277|gb|JAA35085.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
          Length = 953

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 1/213 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  L L+ N     G   L++ L   K +  L L+ N I D G R +   L   KG L
Sbjct: 728 SRLTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-L 786

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G  ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ 
Sbjct: 787 THLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLS 846

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I ++G  ++AR L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   
Sbjct: 847 LASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQN 906

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           QI A G   +AD L+ N  I+ + L  N ++ E
Sbjct: 907 QITAKGTAQLADALQSNTGITEICLNGNLIKPE 939



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
           +N  +    LN
Sbjct: 922 SNTGITEICLN 932



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ IT + L  N I  + 
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVYED 946



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 1/231 (0%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L VL L+ N I  SG   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELQPCFSRLTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+  K L  L L  N I  EG + L   + + K  ++ + +  N +  +GA   AE ++N
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKYLALAVKNSKS-ISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  ++L  N I  EG + +A AL+QN ++  + L  N ++ + A ++A +LK N  +
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L L  N I A G   L++ L+ +  I  + L    I    A+   D  R
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKR 949



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 81/153 (52%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 91/200 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L S  G   +   GN
Sbjct: 915 QLADALQSNTGITEICLNGN 934



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939


>gi|300704108|ref|YP_003745710.1| leucine-rich-repeat type III effector protein (gala4) [Ralstonia
           solanacearum CFBP2957]
 gi|299071771|emb|CBJ43095.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
           solanacearum CFBP2957]
          Length = 461

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 143/276 (51%), Gaps = 39/276 (14%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N+    ++ ++NGI  AG++A    L +N  + TL++S N IGDEG   L      N  +
Sbjct: 215 NKKLTTLNVSSNGIGPAGVRA----LAANTTITTLDISNNEIGDEGALALAS----NTTL 266

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            RL  S   +  EG +A+A     ++ L  L+L+ N I+  G     EAL  N+T+R+LH
Sbjct: 267 TRLDASDCGIGPEGTQALA----TSTTLTSLDLSYNAIEAEGV----EALGRNTTLRTLH 318

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             GN  G   A  LA     N +L  L+L  N+IG+ G RA  +  +     L  L++ N
Sbjct: 319 ACGNELGHREAELLA----ANTTLTVLNLSSNAIGNAGARAFGANTT-----LVELNLSN 369

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I       V E+  N K L  ++L  N IGD  A+ +A     +RT+TT+++G N I 
Sbjct: 370 NGIE-----RVPEWADNGK-LTTLDLSNNQIGDTAAQVLA----ASRTLTTLNVGSNRIG 419

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             GA A+A     N+ +T+L+++ N IG  G  AL+
Sbjct: 420 DTGACALA----GNTTLTTLNVSLNRIGKAGMLALA 451



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 46/288 (15%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L G+ +L  L+L  N+I D G+ A      +R  KL  L++ +N I   G   +A  
Sbjct: 185 ARLLAGHPTLTTLNLRRNAIDDAGVAAF-----ARNKKLTTLNVSSNGIGPAGVRALAAN 239

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                ++  +++  N+IGDEGA     AL  N T+T +D     I  +G  A+A     +
Sbjct: 240 T----TITTLDISNNEIGDEGAL----ALASNTTLTRLDASDCGIGPEGTQALA----TS 287

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLDL+YN I A+G +AL      +  + TL     ++G   AE +A     N T++
Sbjct: 288 TTLTSLDLSYNAIEAEGVEALGR----NTTLRTLHACGNELGHREAELLA----ANTTLT 339

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
           +L+L +N +      G  G   F +       ++  +L  N ++     A + K     L
Sbjct: 340 VLNLSSNAI------GNAGARAFGANTT----LVELNLSNNGIERVPEWADNGK-----L 384

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           T++DL+ N+I D      AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 385 TTLDLSNNQIGDTA----AQVLAASR--TLTTLNVGSNRIGDTGACAL 426



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 35/240 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+S    GDEG   LA     N T   +  +  GI   G +A    L ++  L +L
Sbjct: 242 ITTLDISNNEIGDEGALALAS----NTTLTRLDASDCGIGPEGTQA----LATSTTLTSL 293

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N I  EGV+ L      N  +  L     +L   G +  AELL  N+ L VL L++
Sbjct: 294 DLSYNAIEAEGVEALG----RNTTLRTLHACGNEL---GHRE-AELLAANTTLTVLNLSS 345

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G    A A   N+T+  L+L+ N     G   + +  + N  L  L L  N IG
Sbjct: 346 NAIGNAG----ARAFGANTTLVELNLSNN-----GIERVPEWAD-NGKLTTLDLSNNQIG 395

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D   + L    +SR   L  L++G+N I   GA  +A       +L  +N+ +N IG  G
Sbjct: 396 DTAAQVLA---ASR--TLTTLNVGSNRIGDTGACALAGNT----TLTTLNVSLNRIGKAG 446



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 46/176 (26%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L  N T   ++ ++N I  AG +AF     +N  L  LNLS N              
Sbjct: 329 AELLAANTTLTVLNLSSNAIGNAGARAFG----ANTTLVELNLSNN-------------- 370

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
               G+ER+         E A        +N  L  L+L+NN I   G T+ A+ L  + 
Sbjct: 371 ----GIERVP--------EWA--------DNGKLTTLDLSNNQI---GDTA-AQVLAASR 406

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           T+ +L++  N  G  GA ALA    GN +L  L++  N IG  G+ AL +  +  K
Sbjct: 407 TLTTLNVGSNRIGDTGACALA----GNTTLTTLNVSLNRIGKAGMLALAANTTLEK 458


>gi|76779900|gb|AAI06238.1| LOC496076 protein, partial [Xenopus laevis]
          Length = 435

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 133/249 (53%), Gaps = 15/249 (6%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE   AL   LS +   +  LD+  N+++  GA H+A +++N  SLL +N+  NDIG 
Sbjct: 75  VSDEDFLALTRVLS-KNCFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGT 133

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GAE I  AL +N ++ ++ + GN I +KG    A +L+ NS +  LDL    +G     
Sbjct: 134 DGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLI 193

Query: 462 ALSEVLKFHGNINTLKLG---WCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCS 517
           AL+ VL  +  + ++ L    +  I       +++MLR N+T+  L L  + + D  V  
Sbjct: 194 ALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQR 253

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
            C+ L   H   Y+LKH+    L  N +   G KCLA+  K  N+ L  +DLA N + DD
Sbjct: 254 LCDAL---HEN-YALKHL---DLSCNKITRDGVKCLAEVLK-RNKTLEILDLASNRMEDD 305

Query: 576 GAFAIAQAL 584
           GA  +A+A+
Sbjct: 306 GAIYLAEAI 314



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 11/259 (4%)

Query: 222 TLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TL L GN        + DE    L  +L  N  +  L L   +L D GA  IA  L+NNS
Sbjct: 60  TLKLCGNNRLVQVQRVSDEDFLALTRVLSKNCFITNLDLRYNNLTDNGAAHIATFLQNNS 119

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L +  N I   G   + +AL  NS++ SL + GN  G  G    A  L+ N SL E
Sbjct: 120 SLLCLNIMGNDIGTDGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEE 179

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLW 391
           L L    +G + + AL + L   K  L  +++       I      H++E ++   +L  
Sbjct: 180 LDLGDCDLGIQSLIALATVLLQNK-TLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQE 238

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  +++ D G +++ DAL +N  +  +DL  N I   G   +A VLK N  +  LDLA
Sbjct: 239 LHLSKHEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLA 298

Query: 452 YNPIGADGAKALSEVLKFH 470
            N +  DGA  L+E +  +
Sbjct: 299 SNRMEDDGAIYLAEAIYLY 317



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)

Query: 145 KLFRESKQTLNEFAKELRA--------FSSVDMSGRN-------FGDEGLFFLAESLGYN 189
           ++  E KQ +N F  E+ +         S++ + G N         DE    L   L  N
Sbjct: 31  EMCSEQKQPVNPFIAEILSQTEEQELYASTLKLCGNNRLVQVQRVSDEDFLALTRVLSKN 90

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
                +    N +T  G       LQ+N +L  LN+ GN IG +G + +   L  N+ + 
Sbjct: 91  CFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGTDGAEHITKALHRNSSLL 150

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L+++   + ++G    A +L+ NS L  L+L +  +      +LA  LL+N T++S++L
Sbjct: 151 SLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNL 210

Query: 310 NGNYGGALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           N      +  +    L++ L  N +L+ELHL  + + D G++ L   L      L  LD+
Sbjct: 211 NRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYA-LKHLDL 269

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGN 425
             N I+  G   +AE +K  K+L  ++L  N + D+GA  +A+A+   NR++  + +  N
Sbjct: 270 SCNKITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSN 329

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +I  KG  A+A  +  N+ +  + +  N I  + + A S +LK
Sbjct: 330 SIRGKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLK 372



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 3/252 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++ G + G +G   + ++L  N +   +    N I   G   F  +LQ N +L+ L+L 
Sbjct: 124 LNIMGNDIGTDGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLG 183

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSS---VDLRDEGAKAIAELLKNNSILRVLELNN 283
              +G + +  L  +L+ N  ++ + L+      ++++    ++E+L+ NS L+ L L+ 
Sbjct: 184 DCDLGIQSLIALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSK 243

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           + +   G   L +AL EN  ++ L L+ N     G   LA+ L+ NK+L  L L  N + 
Sbjct: 244 HEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLASNRME 303

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+G   L   +      L  L + +NSI  KG   +A  I     LL+I ++ N I +E 
Sbjct: 304 DDGAIYLAEAIYLYNRSLKALSVVSNSIRGKGLKALAAAINANNCLLYIYIWGNKIDEEA 363

Query: 404 AEKIADALKQNR 415
           +   +  LK  R
Sbjct: 364 SVAFSHLLKSGR 375



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGIT 203
           K+ R+  + L E  K  +    +D++     D+G  +LAE++  YN++ + +S  +N I 
Sbjct: 273 KITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSNSIR 332

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD--- 260
             G+KA    + +N  L  + + GN I +E       +L   +G  RL  SS D++    
Sbjct: 333 GKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLL--KSG--RLSSSSTDVQPYVV 388

Query: 261 EGAKAIAELL 270
           +G   +AEL 
Sbjct: 389 DGRACLAELF 398


>gi|320170600|gb|EFW47499.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 397

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 117/224 (52%), Gaps = 31/224 (13%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+T+  ++L  N  G +GA A+A+ L+ NK+L EL+LH N IG  G +A
Sbjct: 26  GAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQA 85

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
                                        +AE +K   +L  + L  N IGD G   IA+
Sbjct: 86  -----------------------------IAEALKVNTTLKDLFLAENQIGDAGTIAIAE 116

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           ALK N+T++ + L  N I   GA AIA  LK N  +T LDL  N IG  GA+A++E LK 
Sbjct: 117 ALKVNKTLSWLGLIDNQIGDAGAQAIAEALKVNMTLTHLDLHRNQIGDAGAQAIAEALKV 176

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS--ILDLRANGL 511
           +  +  + L +  IG +G + + +  + N T++  I+D + N L
Sbjct: 177 NTTLTYVSLRFNCIGNAGLQAIGEARQVNRTLTRLIIDDQINPL 220



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 109/221 (49%), Gaps = 35/221 (15%)

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           +  +GD GA+ IA+ALK N T+T I L  N I   GA AIA  LK N  +T L L  N I
Sbjct: 19  LRQMGDVGAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQI 78

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           G  GA+A++E LK +  +  L L   QIG +G   +A+ L+ N T+S L L  N + D  
Sbjct: 79  GVAGAQAIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDA- 137

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
                                          GA+ +A++ K VN  LT +DL  N+I D 
Sbjct: 138 -------------------------------GAQAIAEALK-VNMTLTHLDLHRNQIGDA 165

Query: 576 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           GA AIA+ALK N  +   SL    N +   G  A+ +A+ +
Sbjct: 166 GAQAIAEALKVNTTLTYVSLRF--NCIGNAGLQAIGEARQV 204



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 1/189 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +GD G + + + L  N  V  + L +  + D GA+AIAE LK N  L  L L+ N I  +
Sbjct: 22  MGDVGAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVA 81

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+T++ L L  N  G  G  A+A+ L+ NK+L  L L  N IGD G +A
Sbjct: 82  GAQAIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQA 141

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           +   L      L  LD+  N I   GA  +AE +K   +L +++L  N IG+ G + I +
Sbjct: 142 IAEALKVNM-TLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCIGNAGLQAIGE 200

Query: 410 ALKQNRTIT 418
           A + NRT+T
Sbjct: 201 ARQVNRTLT 209



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 33/213 (15%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   ++  I L+ N IGD GA+ IA+ALK N+T+T + L  N I   GA A
Sbjct: 26  GAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQA 85

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +  L LA N IG  G  A++E LK +  ++ L L   QIG +GA+ +A+ 
Sbjct: 86  IAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAEA 145

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L+ N T++ LDL  N + D                                 GA+ +A++
Sbjct: 146 LKVNMTLTHLDLHRNQIGDA--------------------------------GAQAIAEA 173

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            K VN  LT + L FN I + G  AI +A + N
Sbjct: 174 LK-VNTTLTYVSLRFNCIGNAGLQAIGEARQVN 205



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 35/214 (16%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +GA A+A+ L+ N ++  ++L  N IGD G +A                         
Sbjct: 23  GDVGAQAIAEALKVNTTVTGIYLWANQIGDVGAQA------------------------- 57

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
               +AE +K  K+L  + L+ N IG  GA+ IA+ALK N T+  + L  N I   G  A
Sbjct: 58  ----IAEALKVNKTLTELYLHQNQIGVAGAQAIAEALKVNTTLKDLFLAENQIGDAGTIA 113

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N  ++ L L  N IG  GA+A++E LK +  +  L L   QIG +GA+ +A+ 
Sbjct: 114 IAEALKVNKTLSWLGLIDNQIGDAGAQAIAEALKVNMTLTHLDLHRNQIGDAGAQAIAEA 173

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
           L+ N T++ + LR N      C G  GL     A
Sbjct: 174 LKVNTTLTYVSLRFN------CIGNAGLQAIGEA 201



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 92/179 (51%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  GD G   +AE+L  N T   +   AN I   G +A    L+ N  L  L L  N IG
Sbjct: 20  RQMGDVGAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIG 79

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             G + + + L  N  ++ L L+   + D G  AIAE LK N  L  L L +N I  +G 
Sbjct: 80  VAGAQAIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGA 139

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            ++AEAL  N T+  L L+ N  G  GA A+A+ L+ N +L  + L  N IG+ G++A+
Sbjct: 140 QAIAEALKVNMTLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCIGNAGLQAI 198



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     GD G   +AE+L  N+T  E+    N I  AG +A  
Sbjct: 28  QAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQAIA 87

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  LK L L+ N IGD G   + + L  N  +  L L    + D GA+AIAE LK
Sbjct: 88  EALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAEALK 147

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+ N I  +G  ++AEAL  N+T+  + L  N  G  G  A+ +  + N++
Sbjct: 148 VNMTLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCIGNAGLQAIGEARQVNRT 207

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSR 357
           L  L      I D+ I  L   L SR
Sbjct: 208 LTRL------IIDDQINPLAFSLLSR 227


>gi|83749484|ref|ZP_00946474.1| cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease
           inhibitor (RI)-like subfamily. [Ralstonia solanacearum
           UW551]
 gi|83723838|gb|EAP71026.1| cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease
           inhibitor (RI)-like subfamily. [Ralstonia solanacearum
           UW551]
 gi|332322076|gb|AEE41039.1| GALA4 type III effector [Ralstonia solanacearum]
          Length = 460

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 152/301 (50%), Gaps = 43/301 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++     GD G+   A     N+    ++ ++NGI   G++A    L +N  + TL
Sbjct: 193 LTTLNLRRNAIGDAGVAAFAR----NKKLTTLNVSSNGIGPVGVRA----LAANTTITTL 244

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N IGDEG + L      N  + RL  S   +  EG +A+A     ++ L  L+L+ 
Sbjct: 245 DISNNEIGDEGARALA----SNTALTRLDASDCGIGPEGTQALA----TSTTLTSLDLSY 296

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I+  G     EAL  N+T+R+LH  GN  G   A  LA     N +L  L+L  N+IG
Sbjct: 297 NAIEAEGV----EALGRNTTLRTLHACGNELGHREAELLA----ANTTLTVLNLSSNAIG 348

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G RA  +  +     L  L++ NN I       V E+  N K L  ++L  N IGD  
Sbjct: 349 NAGARAFGANTT-----LVELNLSNNGIE-----RVPEWADNGK-LTTLDLSNNQIGDTA 397

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ +A     + T+TT+++G N I   GA A+A     N+ +T+L+++ N IG  G  AL
Sbjct: 398 AQVLA----ASHTLTTLNVGSNRIGDTGACALA----GNTTLTTLNVSLNRIGKAGMLAL 449

Query: 464 S 464
           +
Sbjct: 450 A 450



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 46/288 (15%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L G+ +L  L+L  N+IGD G+ A      +R  KL  L++ +N I   G   +A  
Sbjct: 184 ARLLAGHPTLTTLNLRRNAIGDAGVAAF-----ARNKKLTTLNVSSNGIGPVGVRALAAN 238

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                ++  +++  N+IGDEGA     AL  N  +T +D     I  +G  A+A     +
Sbjct: 239 ----TTITTLDISNNEIGDEGAR----ALASNTALTRLDASDCGIGPEGTQALA----TS 286

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLDL+YN I A+G +AL      +  + TL     ++G   AE +A     N T++
Sbjct: 287 TTLTSLDLSYNAIEAEGVEALGR----NTTLRTLHACGNELGHREAELLA----ANTTLT 338

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
           +L+L +N +      G  G   F +       ++  +L  N ++     A + K     L
Sbjct: 339 VLNLSSNAI------GNAGARAFGANTT----LVELNLSNNGIERVPEWADNGK-----L 383

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           T++DL+ N+I D      AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 384 TTLDLSNNQIGDTA----AQVLAASH--TLTTLNVGSNRIGDTGACAL 425


>gi|119622740|gb|EAX02335.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_c [Homo sapiens]
          Length = 466

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 177/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A  K     L+ N AL  LNL  N +GD GV C+   L
Sbjct: 26  AELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 85

Query: 243 -VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L+    L+ L L++N++  +G   L E LL+ 
Sbjct: 86  QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 145

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 146 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 205

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  +++     +   + +  SL  + L  N +GD G AE     L  +  + T
Sbjct: 206 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRT 265

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG   + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 266 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 325

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C   A+     + +L  N  +  L +  N L D  V   C GL    S +     +L+
Sbjct: 326 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL----RVLW 381

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
            + C         LA +  + N +L  +DL+ N + D G   + ++++
Sbjct: 382 LADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGILQLVESVR 428



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 62  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 121

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 122 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 181

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 182 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 241

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 242 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 301

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 302 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 361

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 362 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 417



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 230 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 279

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 280 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 339

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 340 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 399

Query: 299 LENSTIRSLHLNGNYGGALG 318
           L N ++R L L+ N  G  G
Sbjct: 400 LANHSLRELDLSNNCLGDAG 419


>gi|428170884|gb|EKX39805.1| hypothetical protein GUITHDRAFT_76089 [Guillardia theta CCMP2712]
          Length = 350

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 151/317 (47%), Gaps = 11/317 (3%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA-FDG 212
           LN     L     +D+S    GDEG   + E L  N+T + +    + I   G +A FD 
Sbjct: 37  LNGLNNRLCQLDKLDLSCNKIGDEGGTLIGEFLASNRTLKTLVLQGSSIGPPGQRAIFDA 96

Query: 213 VLQSNIALKTLNLS-----GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +   N +L +L+L       N  GDEG   L + L  N  + RL LS+  L      +++
Sbjct: 97  LKGKNTSLSSLDLGCCGAGKNVCGDEGCLALAEALRRNTSLARLSLSANRLSPGMMSSLS 156

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L  N  L  L+L++NMI   G TSLA++L             +   + GA  +A  +E
Sbjct: 157 RGLGRNLYLTQLDLSDNMIHDEGATSLAQSLSLLHLSELSLCRNSIASS-GAEKIAYAIE 215

Query: 328 -GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
            G   +  L L GN++G  G RA    LS +   L  L + + S+  +    +  Y +  
Sbjct: 216 LGKPGITTLDLSGNAVGYGGCRAFADILSYKNTVLTALKLRSCSLHLQEVEGILRYPR-- 273

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            SL   +L  N+IGD+G   ++  L  NR+I  +DL  N+I   GASA++ VLK N  +T
Sbjct: 274 -SLTMTDLSKNEIGDKGLLHLSRVLASNRSIQHVDLSFNSIGDAGASALSSVLKTNESLT 332

Query: 447 SLDLAYNPIGADGAKAL 463
            LD+++N +   G  +L
Sbjct: 333 ELDVSWNNLREAGLHSL 349



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 149/302 (49%), Gaps = 13/302 (4%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRV 278
           L  L+LS N IGDEG   + + L  N  ++ L L    +   G +AI + LK  N+ L  
Sbjct: 47  LDKLDLSCNKIGDEGGTLIGEFLASNRTLKTLVLQGSSIGPPGQRAIFDALKGKNTSLSS 106

Query: 279 LELN-----NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           L+L       N+    G  +LAEAL  N+++  L L+ N       ++L++GL  N  L 
Sbjct: 107 LDLGCCGAGKNVCGDEGCLALAEALRRNTSLARLSLSANRLSPGMMSSLSRGLGRNLYLT 166

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWI 392
           +L L  N I DEG  A     S     L+ L +  NSI++ GA  +A  I+  K  +  +
Sbjct: 167 QLDLSDNMIHDEG--ATSLAQSLSLLHLSELSLCRNSIASSGAEKIAYAIELGKPGITTL 224

Query: 393 NLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +L  N +G  G    AD L  +N  +T + L   ++H +    I R  +    +T  DL+
Sbjct: 225 DLSGNAVGYGGCRAFADILSYKNTVLTALKLRSCSLHLQEVEGILRYPRS---LTMTDLS 281

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  G   LS VL  + +I  + L +  IG +GA  ++ +L+ N +++ LD+  N L
Sbjct: 282 KNEIGDKGLLHLSRVLASNRSIQHVDLSFNSIGDAGASALSSVLKTNESLTELDVSWNNL 341

Query: 512 RD 513
           R+
Sbjct: 342 RE 343



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 148/313 (47%), Gaps = 22/313 (7%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L+ N  G  G   + + L  N++L+ L L G+SIG  G RA+   L  +   L+ LD+
Sbjct: 50  LDLSCNKIGDEGGTLIGEFLASNRTLKTLVLQGSSIGPPGQRAIFDALKGKNTSLSSLDL 109

Query: 367 G-----NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           G      N    +G   +AE ++   SL  ++L  N +       ++  L +N  +T +D
Sbjct: 110 GCCGAGKNVCGDEGCLALAEALRRNTSLARLSLSANRLSPGMMSSLSRGLGRNLYLTQLD 169

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGW 480
           L  N IH +GA+++A+ L    +        N I + GA+ ++  ++     I TL L  
Sbjct: 170 LSDNMIHDEGATSLAQSLSLLHLSELSL-CRNSIASSGAEKIAYAIELGKPGITTLDLSG 228

Query: 481 CQIGASGAEFVADMLRYNNTI-SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
             +G  G    AD+L Y NT+ + L LR+  L          L      +   + +    
Sbjct: 229 NAVGYGGCRAFADILSYKNTVLTALKLRSCSLH---------LQEVEGILRYPRSLTMTD 279

Query: 540 LCINYLQGAKCLAQSFKVV--NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           L  N + G K L    +V+  N ++  +DL+FN I D GA A++  LK NE  ++T L++
Sbjct: 280 LSKNEI-GDKGLLHLSRVLASNRSIQHVDLSFNSIGDAGASALSSVLKTNE--SLTELDV 336

Query: 598 ANNFLTKFGQSAL 610
           + N L + G  +L
Sbjct: 337 SWNNLREAGLHSL 349



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +  D+S    GD+GL  L+  L  N++ + V  + N I  AG  A   VL++N +L 
Sbjct: 273 RSLTMTDLSKNEIGDKGLLHLSRVLASNRSIQHVDLSFNSIGDAGASALSSVLKTNESLT 332

Query: 222 TLNLSGNPIGDEGVKCLC 239
            L++S N + + G+  LC
Sbjct: 333 ELDVSWNNLREAGLHSLC 350


>gi|125815593|ref|XP_001344236.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Danio rerio]
          Length = 440

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           NI    +N+    +G +G K L   LV N  + +L L    +   GA AIA++LK N  +
Sbjct: 140 NINQSEVNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYI 199

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             ++L++N +   G  +L+  LLENST+ S++L+GN+     A  L+  L  N+ L+ L 
Sbjct: 200 TEIDLSDNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLD 259

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N + D     L + ++   G L  L++  N I  KGA   A+ ++    L  ++L  
Sbjct: 260 LSHNRLTDTAGEILGAAIAENTG-LKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSY 318

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N +G +GA  + +ALKQN T+  +++  N I  +GA  +A  LK N+ +  L ++ NPI 
Sbjct: 319 NGLGKDGALALEEALKQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQ 378

Query: 457 ADGAKAL 463
           + G  A+
Sbjct: 379 SAGCFAI 385



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 1/227 (0%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  +LA +L+ N++I  L+L  N+    GA A+A  L+ N  + E+ L  N +G+ G RA
Sbjct: 157 GTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEIDLSDNRMGEYGARA 216

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L S L       +V ++  N +  + A H++  + + + L  ++L  N + D   E +  
Sbjct: 217 LSSMLLENSTLFSV-NLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRLTDTAGEILGA 275

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           A+ +N  +  ++L  N I  KGA A A+ L+ N  + S+DL+YN +G DGA AL E LK 
Sbjct: 276 AIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGKDGALALEEALKQ 335

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           +  +  L +   +I   GA  +A  L+ N T+ IL +  N ++   C
Sbjct: 336 NNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGC 382



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 1/250 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+M     G +G   LA SL  N +  +++   N +  AG  A   +L+ N  +  ++
Sbjct: 144 SEVNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEID 203

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N +G+ G + L  +L++N+ +  + LS   L +  AK ++  L +N  L+ L+L++N
Sbjct: 204 LSDNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHN 263

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +  +    L  A+ EN+ +++L+L  N     GA A AKGLEGN  LR + L  N +G 
Sbjct: 264 RLTDTAGEILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGK 323

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           +G  AL   L  +   L  L+I NN I  +GA H+A  +K   +L  + +  N I   G 
Sbjct: 324 DGALALEEAL-KQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGC 382

Query: 405 EKIADALKQN 414
             I  +++ N
Sbjct: 383 FAILKSVQSN 392



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 1/265 (0%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           EV+    G+ A G KA    L +N ++  LNL  N +   G   + D+L +N  +  + L
Sbjct: 145 EVNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEIDL 204

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S   + + GA+A++ +L  NS L  + L+ N +D      L+ AL+ N  ++ L L+ N 
Sbjct: 205 SDNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNR 264

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
                   L   +  N  L+ L+L  N I  +G  A   GL      L  +D+  N +  
Sbjct: 265 LTDTAGEILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIF-LRSVDLSYNGLGK 323

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  + E +K   +L  +N+  N I  EGA  +A  LK N T+  + +  N I S G  
Sbjct: 324 DGALALEEALKQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGCF 383

Query: 434 AIARVLKDNSVITSLDLAYNPIGAD 458
           AI + ++ N    +  L ++ I  D
Sbjct: 384 AILKSVQSNPESAAEFLDFSDICVD 408



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 9/210 (4%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +N+    +G +G + +A +L  N +I  ++L  N +   GA+AIA +LK+N  IT +DL+
Sbjct: 146 VNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEIDLS 205

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +G  GA+ALS +L  +  + ++ L    +    A+ ++  L  N  +  LDL  N L
Sbjct: 206 DNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRL 265

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFN 570
            D             +AI     +   +L  N ++G   +A +  +  N  L S+DL++N
Sbjct: 266 TDTAG------EILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYN 319

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANN 600
            +  DGA A+ +ALK N    +  LN++NN
Sbjct: 320 GLGKDGALALEEALKQNN--TLEDLNISNN 347



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 15/228 (6%)

Query: 129 NWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY 188
           NW  GAG   ++               +  KE    + +D+S    G+ G   L+  L  
Sbjct: 179 NWMEGAGAAAIA---------------DMLKENCYITEIDLSDNRMGEYGARALSSMLLE 223

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N T   V+ + N +     K     L SN  L+ L+LS N + D   + L   + +N G+
Sbjct: 224 NSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRLTDTAGEILGAAIAENTGL 283

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + L L+   +R +GA A A+ L+ N  LR ++L+ N +   G  +L EAL +N+T+  L+
Sbjct: 284 KALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGKDGALALEEALKQNNTLEDLN 343

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           ++ N     GA  LA GL+ N +LR L +  N I   G  A++  + S
Sbjct: 344 ISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGCFAILKSVQS 391



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 20/186 (10%)

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           + +++ +  +GA G KAL+  L  + +I  L L    +  +GA  +ADML+ N  I+ +D
Sbjct: 144 SEVNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEID 203

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALT 563
           L  N + +      + +   +S ++S+      +L  N+L  + AK L+ +  + N+ L 
Sbjct: 204 LSDNRMGEYGARALSSMLLENSTLFSV------NLSGNHLDERAAKHLSPAL-ISNQKLQ 256

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEK 623
            +DL+ N + D     +  A+   E+  + +LNLA N +   G+ A+  AK L       
Sbjct: 257 HLDLSHNRLTDTAGEILGAAIA--ENTGLKALNLAWNCIR--GKGAIAFAKGL------- 305

Query: 624 EVNIFF 629
           E NIF 
Sbjct: 306 EGNIFL 311


>gi|145529231|ref|XP_001450404.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418015|emb|CAK83007.1| unnamed protein product [Paramecium tetraurelia]
          Length = 399

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 13/299 (4%)

Query: 176 DEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           D+ L  L   L  Y    + +  + N IT  GI+     L     L++LNL  N IG EG
Sbjct: 58  DQDLILLLSCLQNYKDYIQHIDLSFNEITNVGIQELSKFLSGCNTLESLNLQSNKIGVEG 117

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            + + + + D   +  L L+  +L+ +GA +I E+L NN  +  L L NN ID+ G  ++
Sbjct: 118 GELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNKTILELNLANNGIDHDGVIAI 177

Query: 295 AEAL-LENSTIRSLHLNGNYGGALG---ANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L  +N++++ L+L+     ++G   A    K    N+ L ++ L  ++   + I  +
Sbjct: 178 TSILNWKNNSLQILNLDNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYII 237

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNC--KSLLWINLYMNDIGDEGAEK 406
              L     KL VLD+  N IS KG   +A+Y+  + C  +SL+   L  N  G  GA+ 
Sbjct: 238 TEHL-LENNKLRVLDLTANRISFKGCEAIAKYLCGEYCVLESLI---LTSNRTGHYGAKA 293

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           I+ AL +NRT+  +D+  N+I   G   IA  L+ N ++ SL L  N  G    +A  +
Sbjct: 294 ISQALSKNRTLIHLDMVRNDIDDNGLKMIAESLETNDMLVSLKLYQNHFGQMALQAFHK 352



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 41/299 (13%)

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+ +  L+S L + K  +  +D+  N I+  G   +++++  C +L  +NL  N IG EG
Sbjct: 58  DQDLILLLSCLQNYKDYIQHIDLSFNEITNVGIQELSKFLSGCNTLESLNLQSNKIGVEG 117

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            E IA+ +K  +T+T ++L  NN+ +KGA +I  +L +N  I  L+LA N I  DG  A+
Sbjct: 118 GELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNKTILELNLANNGIDHDGVIAI 177

Query: 464 SEVLK------------------------------FHGN--INTLKLGWCQIGASGAEFV 491
           + +L                               FH N  +  + L            +
Sbjct: 178 TSILNWKNNSLQILNLDNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYII 237

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
            + L  NN + +LDL AN +      GC  ++ +    Y +   L  +       GAK +
Sbjct: 238 TEHLLENNKLRVLDLTANRIS---FKGCEAIAKYLCGEYCVLESLILTSNRTGHYGAKAI 294

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           +Q+    N  L  +D+  N+I D+G   IA++L+ N+   + SL L  N    FGQ AL
Sbjct: 295 SQALS-KNRTLIHLDMVRNDIDDNGLKMIAESLETND--MLVSLKLYQN---HFGQMAL 347



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 10/232 (4%)

Query: 134 AGTNLLSGF---TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ 190
           +G N L      + K+  E  + + E  K+++  + ++++  N   +G   + E L  N+
Sbjct: 98  SGCNTLESLNLQSNKIGVEGGELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNK 157

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSGNP----IGDEGVKCLCDILVDN 245
           T  E++ A NGI   G+ A   +L   N +L+ LNL  NP    IG E       +   N
Sbjct: 158 TILELNLANNGIDHDGVIAITSILNWKNNSLQILNLD-NPVYHSIGQETAIHFGKMFHSN 216

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTI 304
            G+E++ L   +   +    I E L  N+ LRVL+L  N I + G  ++A+ L  E   +
Sbjct: 217 RGLEKISLQKHNFTCDAIYIITEHLLENNKLRVLDLTANRISFKGCEAIAKYLCGEYCVL 276

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            SL L  N  G  GA A+++ L  N++L  L +  N I D G++ +   L +
Sbjct: 277 ESLILTSNRTGHYGAKAISQALSKNRTLIHLDMVRNDIDDNGLKMIAESLET 328


>gi|111306461|gb|AAI21161.1| Chromosome 14 open reading frame 166B [Homo sapiens]
 gi|111307747|gb|AAI21160.1| Chromosome 14 open reading frame 166B [Homo sapiens]
          Length = 462

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 78  NMEESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYL 137

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 138 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKL 197

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 198 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 256

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ NR +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 257 MNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 316

Query: 456 GADGA 460
             DGA
Sbjct: 317 NMDGA 321



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 82  SYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 141

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 142 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKLDLSH 201

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 202 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 261

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L   +  L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 262 NEVALALGEVLRLNRC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 320

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 321 AILLILAIKRN 331



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 95  GTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 154

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 155 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-QIKKLDLSHNQFS-------- 205

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 206 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 245

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 246 GNVTLTKLDLSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNES 305

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 306 LRVLKLFLNPI 316



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 84  VNLNHHGLGPRGTKAIAIALVSNMA-VTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 142

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + I +++L GN+     A+ + + L  N  I  LDL++N
Sbjct: 143 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKLDLSHN 202

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NG  +
Sbjct: 203 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 262

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 263 EVA-------------LALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLES-NESLRV 308

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 309 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 348



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 119 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 178

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 179 DSAALLCQALSTNYQIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 238

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  N  +  L + GN  G  GA+ ++K
Sbjct: 239 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISK 298

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 299 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 349


>gi|21361547|ref|NP_002930.2| ribonuclease inhibitor [Homo sapiens]
 gi|42794608|ref|NP_976318.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822864|ref|NP_976322.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822866|ref|NP_976323.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822868|ref|NP_976321.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822870|ref|NP_976320.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822872|ref|NP_976317.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822874|ref|NP_976319.1| ribonuclease inhibitor [Homo sapiens]
 gi|132573|sp|P13489.2|RINI_HUMAN RecName: Full=Ribonuclease inhibitor; AltName: Full=Placental
           ribonuclease inhibitor; Short=Placental RNase inhibitor;
           AltName: Full=Ribonuclease/angiogenin inhibitor 1;
           Short=RAI
 gi|71042209|pdb|1Z7X|W Chain W, X-Ray Structure Of Human Ribonuclease Inhibitor Complexed
           With Ribonuclease I
 gi|71042211|pdb|1Z7X|Y Chain Y, X-Ray Structure Of Human Ribonuclease Inhibitor Complexed
           With Ribonuclease I
 gi|150261498|pdb|2Q4G|W Chain W, Ensemble Refinement Of The Protein Crystal Structure Of
           Human Ribonuclease Inhibitor Complexed With Ribonuclease
           I
 gi|150261500|pdb|2Q4G|Y Chain Y, Ensemble Refinement Of The Protein Crystal Structure Of
           Human Ribonuclease Inhibitor Complexed With Ribonuclease
           I
 gi|307040|gb|AAA59130.1| ribonuclease inhibitor precursor [Homo sapiens]
 gi|7328056|emb|CAB82310.1| hypothetical protein [Homo sapiens]
 gi|15079321|gb|AAH11500.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|15779129|gb|AAH14629.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|28839291|gb|AAH47730.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|226786|prf||1605207A RNase inhibitor
          Length = 461

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 182/427 (42%), Gaps = 13/427 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSD---ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSG 518
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D  V   
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           C GL    S +     +L+ + C         LA +  + N +L  +DL+ N + D G  
Sbjct: 362 CQGLGQPGSVL----RVLWLADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGIL 416

Query: 579 AIAQALK 585
            + ++++
Sbjct: 417 QLVESVR 423



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|123479710|ref|XP_001323012.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121905868|gb|EAY10789.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 681

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 186/378 (49%), Gaps = 25/378 (6%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           F  +L+A  +V   ++SG+  G   L  L++ L  NQ     +F  N I   GI +   +
Sbjct: 30  FCNQLKASFAVGVLNLSGQRIGINVLTKLSKLLRANQQITAFNFYGNLIRDHGIHSLLQL 89

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  +K L++  N   ++ V  + DI ++N  +  LQ+ +V +     K     L + 
Sbjct: 90  LMVNTRVKVLDIGCNDFTNQAVPTIVDI-INNTKITSLQIGTVGVAWHNNKFTIPALSD- 147

Query: 274 SILRVLELNNNMIDYSGFT-----------------SLAEALLENSTIRSLHLNGNYGGA 316
            I+R ++  +N I+  G +                  LA  + E+ST++SL +  N    
Sbjct: 148 -IVRAVQ-GSNRIECLGLSGLCMSFRVGARKISMDADLAHFIEESSTLKSLSIAENGFAP 205

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                +  GL  N++L+ L +H + + D      +S ++ R  +L+ LD+    +S    
Sbjct: 206 KEQEVVLNGLLQNENLKFLDMHISPLPDPFGGNFLSQIN-RMSRLSYLDLHKCQLSENAG 264

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             +AE +K   SL+ +++  N+IGD G   I+ AL +N T++ +++G NNI  + A  I+
Sbjct: 265 ASLAESLKYNTSLIVLDISENEIGDLGFMAISQALLENYTLSELNVGNNNITEQSADHIS 324

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            ++  N+++++LDL+ N IG  GA A++  +  + ++  L +  C+I  + A  +A  L+
Sbjct: 325 ELILKNNILSNLDLSKNGIGDVGAHAIAASITNNESLTKLNISSCRISDNYAVEIAIALK 384

Query: 497 YNNTISILDLRANGLRDE 514
            N  + +L L  N L  E
Sbjct: 385 DNKALRVLKLSDNFLTRE 402



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 1/181 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA+ L+ N SL  L +  N IGD G  A+   L      L+ L++GNN+I+ + A H++
Sbjct: 266 SLAESLKYNTSLIVLDISENEIGDLGFMAISQALLENYT-LSELNVGNNNITEQSADHIS 324

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E I     L  ++L  N IGD GA  IA ++  N ++T +++    I    A  IA  LK
Sbjct: 325 ELILKNNILSNLDLSKNGIGDVGAHAIAASITNNESLTKLNISSCRISDNYAVEIAIALK 384

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           DN  +  L L+ N +  +   ++ E ++ +  I T+ +   QI     + +  + + N  
Sbjct: 385 DNKALRVLKLSDNFLTRECGYSILEEIRANEVIFTIDVSATQIDHFVQQAINTLCQRNKQ 444

Query: 501 I 501
           I
Sbjct: 445 I 445



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 192/419 (45%), Gaps = 27/419 (6%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K F   L+++ A+  LNLSG  IG   +  L  +L  N  +         +RD G  ++ 
Sbjct: 28  KRFCNQLKASFAVGVLNLSGQRIGINVLTKLSKLLRANQQITAFNFYGNLIRDHGIHSLL 87

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA------ 321
           +LL  N+ ++VL++  N        ++ + ++ N+ I SL + G  G A   N       
Sbjct: 88  QLLMVNTRVKVLDIGCNDFTNQAVPTIVD-IINNTKITSLQI-GTVGVAWHNNKFTIPAL 145

Query: 322 --LAKGLEGNKSLRELHLHG----NSIGDEGIR--ALMSGLSSRKGKLAVLDIGNNSISA 373
             + + ++G+  +  L L G      +G   I   A ++        L  L I  N  + 
Sbjct: 146 SDIVRAVQGSNRIECLGLSGLCMSFRVGARKISMDADLAHFIEESSTLKSLSIAENGFAP 205

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           K    V   +   ++L +++++++ + D         + +   ++ +DL    +     +
Sbjct: 206 KEQEVVLNGLLQNENLKFLDMHISPLPDPFGGNFLSQINRMSRLSYLDLHKCQLSENAGA 265

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           ++A  LK N+ +  LD++ N IG  G  A+S+ L  +  ++ L +G   I    A+ +++
Sbjct: 266 SLAESLKYNTSLIVLDISENEIGDLGFMAISQALLENYTLSELNVGNNNITEQSADHISE 325

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI--NYLQGAKCL 551
           ++  NN +S LDL  NG+ D    G + ++   +   SL  +   S  I  NY   A  +
Sbjct: 326 LILKNNILSNLDLSKNGIGD---VGAHAIAASITNNESLTKLNISSCRISDNY---AVEI 379

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           A + K  N+AL  + L+ N +  +  ++I + ++ANE   + +++++   +  F Q A+
Sbjct: 380 AIALKD-NKALRVLKLSDNFLTRECGYSILEEIRANE--VIFTIDVSATQIDHFVQQAI 435



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S    GD G   ++++L  N T  E++   N IT         ++  N  L  L+LS
Sbjct: 280 LDISENEIGDLGFMAISQALLENYTLSELNVGNNNITEQSADHISELILKNNILSNLDLS 339

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G   +   + +N  + +L +SS  + D  A  IA  LK+N  LRVL+L++N +
Sbjct: 340 KNGIGDVGAHAIAASITNNESLTKLNISSCRISDNYAVEIAIALKDNKALRVLKLSDNFL 399

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL-RELHLH 338
                 S+ E +  N  I ++ ++          A+    + NK + RE++L 
Sbjct: 400 TRECGYSILEEIRANEVIFTIDVSATQIDHFVQQAINTLCQRNKQIQREVNLQ 452


>gi|56269507|gb|AAH87492.1| LOC496076 protein, partial [Xenopus laevis]
          Length = 425

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 133/249 (53%), Gaps = 15/249 (6%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE   AL   LS +   +  LD+  N+++  GA H+A +++N  SLL +N+  NDIG 
Sbjct: 71  VSDEDFLALTRVLS-KNCFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGT 129

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GAE I  AL +N ++ ++ + GN I +KG    A +L+ NS +  LDL    +G     
Sbjct: 130 DGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLI 189

Query: 462 ALSEVLKFHGNINTLKLG---WCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCS 517
           AL+ VL  +  + ++ L    +  I       +++MLR N+T+  L L  + + D  V  
Sbjct: 190 ALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQR 249

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
            C+ L   H   Y+LKH+    L  N +   G KCLA+  K  N+ L  +DLA N + DD
Sbjct: 250 LCDAL---HEN-YALKHL---DLSCNKITRDGVKCLAEVLK-RNKTLEILDLASNRMEDD 301

Query: 576 GAFAIAQAL 584
           GA  +A+A+
Sbjct: 302 GAIYLAEAI 310



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 11/259 (4%)

Query: 222 TLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TL L GN        + DE    L  +L  N  +  L L   +L D GA  IA  L+NNS
Sbjct: 56  TLKLCGNNRLVQVQRVSDEDFLALTRVLSKNCFITNLDLRYNNLTDNGAAHIATFLQNNS 115

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L +  N I   G   + +AL  NS++ SL + GN  G  G    A  L+ N SL E
Sbjct: 116 SLLCLNIMGNDIGTDGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEE 175

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLW 391
           L L    +G + + AL + L   K  L  +++       I      H++E ++   +L  
Sbjct: 176 LDLGDCDLGIQSLIALATVLLQNK-TLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQE 234

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  +++ D G +++ DAL +N  +  +DL  N I   G   +A VLK N  +  LDLA
Sbjct: 235 LHLSKHEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLA 294

Query: 452 YNPIGADGAKALSEVLKFH 470
            N +  DGA  L+E +  +
Sbjct: 295 SNRMEDDGAIYLAEAIYLY 313



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)

Query: 145 KLFRESKQTLNEFAKELRA--------FSSVDMSGRN-------FGDEGLFFLAESLGYN 189
           ++  E KQ +N F  E+ +         S++ + G N         DE    L   L  N
Sbjct: 27  EMCSEQKQPVNPFIAEILSQTEEQELYASTLKLCGNNRLVQVQRVSDEDFLALTRVLSKN 86

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
                +    N +T  G       LQ+N +L  LN+ GN IG +G + +   L  N+ + 
Sbjct: 87  CFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGTDGAEHITKALHRNSSLL 146

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L+++   + ++G    A +L+ NS L  L+L +  +      +LA  LL+N T++S++L
Sbjct: 147 SLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNL 206

Query: 310 NGNYGGALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           N      +  +    L++ L  N +L+ELHL  + + D G++ L   L      L  LD+
Sbjct: 207 NRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYA-LKHLDL 265

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGN 425
             N I+  G   +AE +K  K+L  ++L  N + D+GA  +A+A+   NR++  + +  N
Sbjct: 266 SCNKITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSN 325

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +I  KG  A+A  +  N+ +  + +  N I  + + A S +LK
Sbjct: 326 SIRGKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLK 368



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 3/252 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++ G + G +G   + ++L  N +   +    N I   G   F  +LQ N +L+ L+L 
Sbjct: 120 LNIMGNDIGTDGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLG 179

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSS---VDLRDEGAKAIAELLKNNSILRVLELNN 283
              +G + +  L  +L+ N  ++ + L+      ++++    ++E+L+ NS L+ L L+ 
Sbjct: 180 DCDLGIQSLIALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSK 239

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           + +   G   L +AL EN  ++ L L+ N     G   LA+ L+ NK+L  L L  N + 
Sbjct: 240 HEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLASNRME 299

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+G   L   +      L  L + +NSI  KG   +A  I     LL+I ++ N I +E 
Sbjct: 300 DDGAIYLAEAIYLYNRSLKALSVVSNSIRGKGLKALAAAINANNCLLYIYIWGNKIDEEA 359

Query: 404 AEKIADALKQNR 415
           +   +  LK  R
Sbjct: 360 SVAFSHLLKSGR 371



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGIT 203
           K+ R+  + L E  K  +    +D++     D+G  +LAE++  YN++ + +S  +N I 
Sbjct: 269 KITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSNSIR 328

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD--- 260
             G+KA    + +N  L  + + GN I +E       +L   +G  RL  SS D++    
Sbjct: 329 GKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLL--KSG--RLSSSSTDVQPYVV 384

Query: 261 EGAKAIAEL 269
           +G   +AEL
Sbjct: 385 DGCACLAEL 393


>gi|6626184|gb|AAF19528.1|AF215731_1 Ran GTPase activating protein [Medicago sativa subsp. x varia]
          Length = 533

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 41/374 (10%)

Query: 152 QTLNEFAKEL---RAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITA 204
           Q  +E  K L    +F+ +  S R+FG +    +   L       +EV    F A    A
Sbjct: 139 QEASELLKPLMGPNSFTKICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEA 198

Query: 205 AGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             I+    F   L+  + L+ LNLS N +G++GV+    +L     +E L L +  + +E
Sbjct: 199 EAIEVMNIFSSALERAV-LRYLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEE 257

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            AKA+AEL+ +   L+VL  +NNM    G  ++AE +  +  +     +    G+ G  A
Sbjct: 258 AAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIAEVVKRSPALEDFRCSSTRVGSEGGVA 317

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+ L     L++L L  N  G E   AL                             ++
Sbjct: 318 LAEALGACTHLKKLDLRDNMFGVEAGVAL-----------------------------SK 348

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLK 440
            I     L  I L   ++ D+GAE +A+ALK++  ++ T+D+ GN+I +K   ++A  + 
Sbjct: 349 VIPVFADLTEIYLSYLNLEDDGAEALANALKESAPSLETLDMAGNDITAKATVSVAECIS 408

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
               +T L+L+ N +  +GA  +S+ L+  G ++ + L    I  SGA+ +A+ +     
Sbjct: 409 SKQFLTKLNLSENELKDEGAGLISKALEGRGQLSEVDLSTNLITWSGAKLLAEAVVQKPG 468

Query: 501 ISILDLRANGLRDE 514
             +L++ AN + DE
Sbjct: 469 FKLLNINANFISDE 482



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 131/269 (48%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L L  + I +E  K + +++     ++ L   +    
Sbjct: 224 NAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTG 283

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE++K +  L     ++  +   G  +LAEAL   + ++ L L  N  G    
Sbjct: 284 DEGAFAIAEVVKRSPALEDFRCSSTRVGSEGGVALAEALGACTHLKKLDLRDNMFGVEAG 343

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K +     L E++L   ++ D+G  AL + L      L  LD+  N I+AK    V
Sbjct: 344 VALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESAPSLETLDMAGNDITAKATVSV 403

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I + + L  +NL  N++ DEGA  I+ AL+    ++ +DL  N I   GA  +A  +
Sbjct: 404 AECISSKQFLTKLNLSENELKDEGAGLISKALEGRGQLSEVDLSTNLITWSGAKLLAEAV 463

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLK 468
                   L++  N I  +G   L ++ K
Sbjct: 464 VQKPGFKLLNINANFISDEGIDELKDIFK 492



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 37/283 (13%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  VAE I + + L  
Sbjct: 216 LRYLNLSNNAMGEKGVRAFRALLKSQ-NDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 274

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++ + N  GDEGA  IA+ +K++  +         + S+G  A+A  L   + +  LDL 
Sbjct: 275 LHFHNNMTGDEGAFAIAEVVKRSPALEDFRCSSTRVGSEGGVALAEALGACTHLKKLDLR 334

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTISILDLRANG 510
            N  G +   ALS+V+    ++  + L +  +   GAE +A+ L+ +  ++  LD+  N 
Sbjct: 335 DNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESAPSLETLDMAGND 394

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFN 570
           +                   + K  +  + CI+  Q               LT ++L+ N
Sbjct: 395 I-------------------TAKATVSVAECISSKQ--------------FLTKLNLSEN 421

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           E++D+GA  I++AL+      ++ ++L+ N +T  G   L +A
Sbjct: 422 ELKDEGAGLISKALEGRGQ--LSEVDLSTNLITWSGAKLLAEA 462


>gi|403354784|gb|EJY76953.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 404

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 10/321 (3%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGIT 203
           K   E+++  +     ++    ++ S R   D+ L  +  +L  Y    E++    N IT
Sbjct: 34  KYLEETQEENDSLEIVIQGNDKLNFSNR-VNDQTLIAICSTLENYAIYIEDIDLRFNEIT 92

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
             G KA   ++  +  L  LNL GN I  EG + L + L +   ++ L L+   ++  GA
Sbjct: 93  DIGAKALGDLICKSPRLLGLNLQGNRIKSEGAQYLAESLKECTSLQYLNLNLNKIKTNGA 152

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHL-NGNYGGALGANA 321
             + ELL  +  L  L L NN ID+ G   +   L   N T+  L++ N  Y     + A
Sbjct: 153 MMVTELLFTHDKLLSLNLGNNKIDHDGIIGILSVLNSSNYTLEELNIDNPVYKTICQSVA 212

Query: 322 L--AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           +   K  + N  L++L L  + + D+G+  +M  L      L +LD+ +N IS KG   +
Sbjct: 213 IHFGKMFQNNVGLQKLSLRKHKLRDDGVYIIMEHL-LENNTLKILDLNSNEISFKGCDAI 271

Query: 380 AEYIK--NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           A+Y+K  NC SL  ++L  N   D GA+ I+ AL QN+++  +D+  N+I   G +  A+
Sbjct: 272 AKYLKSGNC-SLESLHLANNKCSDYGAKAISQALSQNKSLIHLDMTYNDIKDYGLTFFAQ 330

Query: 438 VLKDNSVITSLDLAYNPIGAD 458
            L  NS I S  +  N  G +
Sbjct: 331 SLFHNSTIMSFKIFGNHFGQE 351



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 147/294 (50%), Gaps = 9/294 (3%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLK 271
           V+Q N     LN S N + D+ +  +C  L + A  +E + L   ++ D GAKA+ +L+ 
Sbjct: 49  VIQGN---DKLNFS-NRVNDQTLIAICSTLENYAIYIEDIDLRFNEITDIGAKALGDLIC 104

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +  L  L L  N I   G   LAE+L E ++++ L+LN N     GA  + + L  +  
Sbjct: 105 KSPRLLGLNLQGNRIKSEGAQYLAESLKECTSLQYLNLNLNKIKTNGAMMVTELLFTHDK 164

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN---NSISAKGAFHVAEYIKNCKS 388
           L  L+L  N I  +GI  ++S L+S    L  L+I N    +I    A H  +  +N   
Sbjct: 165 LLSLNLGNNKIDHDGIIGILSVLNSSNYTLEELNIDNPVYKTICQSVAIHFGKMFQNNVG 224

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITS 447
           L  ++L  + + D+G   I + L +N T+  +DL  N I  KG  AIA+ LK  N  + S
Sbjct: 225 LQKLSLRKHKLRDDGVYIIMEHLLENNTLKILDLNSNEISFKGCDAIAKYLKSGNCSLES 284

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           L LA N     GAKA+S+ L  + ++  L + +  I   G  F A  L +N+TI
Sbjct: 285 LHLANNKCSDYGAKAISQALSQNKSLIHLDMTYNDIKDYGLTFFAQSLFHNSTI 338



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 22/295 (7%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           + ++ L  N I D G +AL   L  +  +L  L++  N I ++GA ++AE +K C SL +
Sbjct: 81  IEDIDLRFNEITDIGAKAL-GDLICKSPRLLGLNLQGNRIKSEGAQYLAESLKECTSLQY 139

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDL 450
           +NL +N I   GA  + + L  +  + +++LG N I   G   I  VL   N  +  L++
Sbjct: 140 LNLNLNKIKTNGAMMVTELLFTHDKLLSLNLGNNKIDHDGIIGILSVLNSSNYTLEELNI 199

Query: 451 ---AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
               Y  I    A    ++ + +  +  L L   ++   G   + + L  NNT+ ILDL 
Sbjct: 200 DNPVYKTICQSVAIHFGKMFQNNVGLQKLSLRKHKLRDDGVYIIMEHLLENNTLKILDLN 259

Query: 508 ANGLRDEVCSGCNGLS-FFHSAIYSLKHM-LFYSLCINYLQGAKCLAQSFKVVNEALTSI 565
           +N +      GC+ ++ +  S   SL+ + L  + C +Y  GAK ++Q+    N++L  +
Sbjct: 260 SNEIS---FKGCDAIAKYLKSGNCSLESLHLANNKCSDY--GAKAISQALSQ-NKSLIHL 313

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 620
           D+ +N+I+D G    AQ+L  N  +    +     F   FGQ  L    DL Y++
Sbjct: 314 DMTYNDIKDYGLTFFAQSLFHNSTIMSFKI-----FGNHFGQECL----DLFYKL 359


>gi|326426976|gb|EGD72546.1| hypothetical protein PTSG_11612 [Salpingoeca sp. ATCC 50818]
          Length = 1979

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 166/382 (43%), Gaps = 54/382 (14%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L E++     A  +S     +   G  A    L  N  L+ LNL  N +G +G   + D 
Sbjct: 56  LIEAIANGSCAARISLEGASLGPTGAGALAVALSVNTNLERLNLDNNTLGPQGAARVADA 115

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           +  +  ++ L L + D+ DEGA + A  L+ N+ L V+ LN N I   G  +L  A+ +N
Sbjct: 116 IATHTSLQWLSLFNNDIGDEGAGSFAAALQQNNSLYVIRLNCNNIGPDGGRALGTAMEKN 175

Query: 302 STIRSLHLNGN-------YGGALGANALAKG-----------LEGNKSLRELHLHGNSIG 343
           S +  + L GN       +G AL    + +             +  +  R  HL+ +++G
Sbjct: 176 SKLTQITLWGNSIDAIREFGAALPPERMMQCNDLSNDERDALDDAREEKRTHHLNWDNLG 235

Query: 344 -----------------------------------DEGIRALMSGLSSRKGKLAVLDIGN 368
                                               +G R L   L    G+L  L++  
Sbjct: 236 AMLKQQSLKPKTRRSIQAIAKNNCAAADLNYTPLHTQGARVLALALRD-SGRLQELELDG 294

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
             +   GA  +A  +K+  SLL ++L   ++ DEGA  IA AL++N T+  I LG N I 
Sbjct: 295 TRLGPTGAAILAAALKHHTSLLRLSLQSANVQDEGAMAIAGALRKNNTLERILLGSNYIS 354

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA+A+A  +K N+ +  + +  N IG  GA A +  L+ +  ++ L L   +I A+G 
Sbjct: 355 RPGANALANAMKTNTSLKVMFVDRNRIGDKGAIAFARALQDNSTLSHLLLYENRITANGG 414

Query: 489 EFVADMLRYNNTISILDLRANG 510
             +   L  N T+  L L+ NG
Sbjct: 415 RTLGLALHTNKTLQQLSLQGNG 436



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 186/382 (48%), Gaps = 33/382 (8%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K L + + + +   R+ L    L   GA A+A  L  N+ L  L L+NN +   G   +A
Sbjct: 54  KELIEAIANGSCAARISLEGASLGPTGAGALAVALSVNTNLERLNLDNNTLGPQGAARVA 113

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           +A+  +++++ L L  N  G  GA + A  L+ N SL  + L+ N+IG +G RAL + + 
Sbjct: 114 DAIATHTSLQWLSLFNNDIGDEGAGSFAAALQQNNSLYVIRLNCNNIGPDGGRALGTAM- 172

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVA---EYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            +  KL  + +  NSI A   F  A   E +  C          ND+ ++  + + DA +
Sbjct: 173 EKNSKLTQITLWGNSIDAIREFGAALPPERMMQC----------NDLSNDERDALDDARE 222

Query: 413 QNRT--ITTIDLGG----NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + RT  +   +LG      ++  K   +I  + K+N    + DL Y P+   GA+ L+  
Sbjct: 223 EKRTHHLNWDNLGAMLKQQSLKPKTRRSIQAIAKNN--CAAADLNYTPLHTQGARVLALA 280

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           L+  G +  L+L   ++G +GA  +A  L+++ ++  L L++  ++DE   G   ++   
Sbjct: 281 LRDSGRLQELELDGTRLGPTGAAILAAALKHHTSLLRLSLQSANVQDE---GAMAIAGAL 337

Query: 527 SAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
               +L+ +L  S   NY+   GA  LA + K  N +L  + +  N I D GA A A+AL
Sbjct: 338 RKNNTLERILLGS---NYISRPGANALANAMK-TNTSLKVMFVDRNRIGDKGAIAFARAL 393

Query: 585 KANEDVAVTSLNLANNFLTKFG 606
           + N    ++ L L  N +T  G
Sbjct: 394 QDNS--TLSHLLLYENRITANG 413



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 175/449 (38%), Gaps = 56/449 (12%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG- 231
           + GDEG    A +L  N +   +    N I   G +A    ++ N  L  + L GN I  
Sbjct: 131 DIGDEGAGSFAAALQQNNSLYVIRLNCNNIGPDGGRALGTAMEKNSKLTQITLWGNSIDA 190

Query: 232 ----------DEGVKC------LCDILVDNAGVERLQ----------LSSVDLRDEGAKA 265
                     +  ++C        D L D    +R            L    L+ +  ++
Sbjct: 191 IREFGAALPPERMMQCNDLSNDERDALDDAREEKRTHHLNWDNLGAMLKQQSLKPKTRRS 250

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           I  + KNN      +LN   +   G   LA AL ++  ++ L L+G   G  GA  LA  
Sbjct: 251 IQAIAKNNCA--AADLNYTPLHTQGARVLALALRDSGRLQELELDGTRLGPTGAAILAAA 308

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ + SL  L L   ++ DEG  A+   L  +   L  + +G+N IS  GA  +A  +K 
Sbjct: 309 LKHHTSLLRLSLQSANVQDEGAMAIAGALR-KNNTLERILLGSNYISRPGANALANAMKT 367

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  + +  N IGD+GA   A AL+ N T++ + L  N I + G   +   L  N  +
Sbjct: 368 NTSLKVMFVDRNRIGDKGAIAFARALQDNSTLSHLLLYENRITANGGRTLGLALHTNKTL 427

Query: 446 TSLDLAYNPIGADGAKALSE--------VLKFHGN-INTLKLGWCQIGASGAEF-VADML 495
             L L  N  G + A A           V++F    +N  K    Q    G E  +AD+ 
Sbjct: 428 QQLSLQGN--GKETAAAFGRALPPNRQVVIEFAAEELNAYKNARAQTMTEGPEQQIADLE 485

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           +  +   + +   + LR    + CN   FF                +   +         
Sbjct: 486 KALSESDLNEATMSKLRSISANTCNAAVFFDG--------------VRLGEPEAKALAQA 531

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
              N  + ++DL    + D G  A+A A+
Sbjct: 532 LKANTCIVNLDLDNTHLGDTGVIALADAI 560



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 163/376 (43%), Gaps = 24/376 (6%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +++ G   G  G   LA +L ++ +   +S  +  +   G  A  G L+ N  L+ +
Sbjct: 287 LQELELDGTRLGPTGAAILAAALKHHTSLLRLSLQSANVQDEGAMAIAGALRKNNTLERI 346

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I   G   L + +  N  ++ + +    + D+GA A A  L++NS L  L L  
Sbjct: 347 LLGSNYISRPGANALANAMKTNTSLKVMFVDRNRIGDKGAIAFARALQDNSTLSHLLLYE 406

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL------RELHL 337
           N I  +G  +L  AL  N T++ L L GN  G   A A  + L  N+ +       EL+ 
Sbjct: 407 NRITANGGRTLGLALHTNKTLQQLSLQGN--GKETAAAFGRALPPNRQVVIEFAAEELNA 464

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           + N+            ++  +  L+  D+   ++S   +         C + ++ +    
Sbjct: 465 YKNARAQTMTEGPEQQIADLEKALSESDLNEATMSKLRSISA----NTCNAAVFFDGVR- 519

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +G+  A+ +A ALK N  I  +DL   ++   G  A+A  + ++  +  + L  N IG 
Sbjct: 520 -LGEPEAKALAQALKANTCIVNLDLDNTHLGDTGVIALADAIANHPRLRWVSLYKNNIGD 578

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN-------- 509
           DGA A +  ++   ++ + ++    +GA+G   +A+ +  N + + + +  N        
Sbjct: 579 DGAVAFARAIQTSTSLCSARINCNHVGAAGGRALAEAMNANKSFTHITMWGNSVEAVRAF 638

Query: 510 --GLRDEVCSGCNGLS 523
              L DE    C GLS
Sbjct: 639 GTALSDEREIECEGLS 654



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 143/327 (43%), Gaps = 8/327 (2%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           ++ D++      +G   LA +L  +   +E+      +   G       L+ + +L  L+
Sbjct: 260 AAADLNYTPLHTQGARVLALALRDSGRLQELELDGTRLGPTGAAILAAALKHHTSLLRLS 319

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L    + DEG   +   L  N  +ER+ L S  +   GA A+A  +K N+ L+V+ ++ N
Sbjct: 320 LQSANVQDEGAMAIAGALRKNNTLERILLGSNYISRPGANALANAMKTNTSLKVMFVDRN 379

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  + A AL +NST+  L L  N   A G   L   L  NK+L++L L GN  G 
Sbjct: 380 RIGDKGAIAFARALQDNSTLSHLLLYENRITANGGRTLGLALHTNKTLQQLSLQGN--GK 437

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISA---KGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           E   A    L   +    V++     ++A     A  + E  +   + L   L  +D+ +
Sbjct: 438 ETAAAFGRALPPNRQ--VVIEFAAEELNAYKNARAQTMTEGPEQQIADLEKALSESDLNE 495

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
               K+  ++  N     +   G  +    A A+A+ LK N+ I +LDL    +G  G  
Sbjct: 496 ATMSKLR-SISANTCNAAVFFDGVRLGEPEAKALAQALKANTCIVNLDLDNTHLGDTGVI 554

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGA 488
           AL++ +  H  +  + L    IG  GA
Sbjct: 555 ALADAIANHPRLRWVSLYKNNIGDDGA 581



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 27/233 (11%)

Query: 133 GAGTNLLSGFTGKLFRESKQTLNEFA-KELRAFSSVDMSGRNFGDEGLFF-----LAES- 185
           G G    + F G+    ++Q + EFA +EL A+ +        G E         L+ES 
Sbjct: 434 GNGKETAAAF-GRALPPNRQVVIEFAAEELNAYKNARAQTMTEGPEQQIADLEKALSESD 492

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L     ++  S +AN   AA    FDGV                +G+   K L   L  N
Sbjct: 493 LNEATMSKLRSISANTCNAAVF--FDGVR---------------LGEPEAKALAQALKAN 535

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             +  L L +  L D G  A+A+ + N+  LR + L  N I   G  + A A+  ++++ 
Sbjct: 536 TCIVNLDLDNTHLGDTGVIALADAIANHPRLRWVSLYKNNIGDDGAVAFARAIQTSTSLC 595

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           S  +N N+ GA G  ALA+ +  NKS   + + GNS+  E +RA  + LS  +
Sbjct: 596 SARINCNHVGAAGGRALAEAMNANKSFTHITMWGNSV--EAVRAFGTALSDER 646


>gi|3892017|pdb|1A4Y|A Chain A, Ribonuclease Inhibitor-Angiogenin Complex
 gi|3892019|pdb|1A4Y|D Chain D, Ribonuclease Inhibitor-Angiogenin Complex
 gi|62738925|pdb|2BEX|A Chain A, Crystal Structure Of Placental Ribonuclease Inhibitor In
           Complex With Human Eosinophil Derived Neurotoxin At 2a
           Resolution
 gi|62738926|pdb|2BEX|B Chain B, Crystal Structure Of Placental Ribonuclease Inhibitor In
           Complex With Human Eosinophil Derived Neurotoxin At 2a
           Resolution
          Length = 460

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 182/427 (42%), Gaps = 13/427 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 4   IQSLDIQCEELSD---ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 61  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 120

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 121 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 180

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 181 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 240

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 241 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 300

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSG 518
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D  V   
Sbjct: 301 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 360

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           C GL    S +     +L+ + C         LA +  + N +L  +DL+ N + D G  
Sbjct: 361 CQGLGQPGSVL----RVLWLADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGIL 415

Query: 579 AIAQALK 585
            + ++++
Sbjct: 416 QLVESVR 422



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 56  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 115

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 116 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 175

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 176 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 235

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 236 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 295

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 296 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 355

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 356 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 411



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 224 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 273

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 274 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 333

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 334 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 393

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 394 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 429


>gi|320170130|gb|EFW47029.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 361

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 1/170 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD G +A+   L+  K  L+ LD+  N I   GA  +A+ ++  K+L W+NL +
Sbjct: 16  LWQNQIGDVGGQAIAEALNVNK-TLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQL 74

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGD GA  IA+AL+ N T+  + L  N +   GA AIA  LK N  +  L+L  N  G
Sbjct: 75  NQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETG 134

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             GA+A++E LK +  +  L L   QIG  GA+ +A  L+ N T++ LD+
Sbjct: 135 DVGAQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDI 184



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 35/208 (16%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L+ N IGD G + IA+AL  N+T++ +DL  N I   GA AIA  L+ N  ++ L+L  N
Sbjct: 16  LWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLN 75

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A++E L+ +  +N L L   Q+G +GA  +A+ L+ N T+  L+L  N   D
Sbjct: 76  QIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGD 135

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA+ +A++ KV N  L  ++L  ++I 
Sbjct: 136 --------------------------------VGAQAIAEALKV-NMTLKELNLEKSQIG 162

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNF 601
           D GA AIA+ALK N    VT L++ +  
Sbjct: 163 DIGAQAIAKALKVN--TTVTELDIDDQI 188



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 102/197 (51%), Gaps = 2/197 (1%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   N I   G +A    L  N  L  L+LS N IGD G + + D L  N  +  L L  
Sbjct: 15  SLWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQL 74

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+AIAE L+ N+ L  L L  N +  +G  ++AEAL  N T+  L+L  N  G
Sbjct: 75  NQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETG 134

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL--SSRKGKLAVLDIGNNSISA 373
            +GA A+A+ L+ N +L+EL+L  + IGD G +A+   L  ++   +L + D  N+  + 
Sbjct: 135 DVGAQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDIDDQINSLATL 194

Query: 374 KGAFHVAEYIKNCKSLL 390
           +     AE + N   LL
Sbjct: 195 RPRLATAEDLHNVFHLL 211



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 87/164 (53%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N+T   +  + N I  AG +A    L+ N  L  LNL  N IGD 
Sbjct: 21  IGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLNQIGDA 80

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  + +L L    L D GA AIAE LK N  L  L L NN     G  +
Sbjct: 81  GARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGDVGAQA 140

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +AEAL  N T++ L+L  +  G +GA A+AK L+ N ++ EL +
Sbjct: 141 IAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDI 184



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 9/172 (5%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +GD    +L+ G+ S         +  N I   G   +AE +   K+L W++L  N IGD
Sbjct: 1   MGDSDECSLVEGMDS---------LWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGD 51

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA  IADAL+ N+T++ ++L  N I   GA AIA  L+ N+ +  L L  N +G  GA 
Sbjct: 52  AGARAIADALRVNKTLSWLNLQLNQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAY 111

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           A++E LK +  +  L L   + G  GA+ +A+ L+ N T+  L+L  + + D
Sbjct: 112 AIAEALKLNKTLFRLNLYNNETGDVGAQAIAEALKVNMTLKELNLEKSQIGD 163



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 77/149 (51%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  S +D+S    GD G   +A++L  N+T   ++   N I  AG +A    L+ N  L 
Sbjct: 37  KTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLNQIGDAGARAIAEALRVNTTLN 96

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N +GD G   + + L  N  + RL L + +  D GA+AIAE LK N  L+ L L
Sbjct: 97  KLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGDVGAQAIAEALKVNMTLKELNL 156

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLN 310
             + I   G  ++A+AL  N+T+  L ++
Sbjct: 157 EKSQIGDIGAQAIAKALKVNTTVTELDID 185



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 38/186 (20%)

Query: 443 SVITSLD-LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           S++  +D L  N IG  G +A++E L  +  ++ L L   QIG +GA  +AD LR N T+
Sbjct: 8   SLVEGMDSLWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTL 67

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           S L+L+ N + D                                 GA+ +A++ +V N  
Sbjct: 68  SWLNLQLNQIGDA--------------------------------GARAIAEALRV-NTT 94

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           L  + L  N++ D GA+AIA+ALK N+   +  LNL NN     G  A+ +A  L   M+
Sbjct: 95  LNKLFLEENQLGDAGAYAIAEALKLNK--TLFRLNLYNNETGDVGAQAIAEA--LKVNMT 150

Query: 622 EKEVNI 627
            KE+N+
Sbjct: 151 LKELNL 156



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 62/124 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  S +++     GD G   +AE+L  N T  ++    N +  AG  A    L+ N  L 
Sbjct: 65  KTLSWLNLQLNQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLF 124

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N  GD G + + + L  N  ++ L L    + D GA+AIA+ LK N+ +  L++
Sbjct: 125 RLNLYNNETGDVGAQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDI 184

Query: 282 NNNM 285
           ++ +
Sbjct: 185 DDQI 188


>gi|119622735|gb|EAX02330.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119622736|gb|EAX02331.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119622738|gb|EAX02333.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119622739|gb|EAX02334.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119622741|gb|EAX02336.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
          Length = 456

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 177/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A  K     L+ N AL  LNL  N +GD GV C+   L
Sbjct: 16  AELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 75

Query: 243 -VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L+    L+ L L++N++  +G   L E LL+ 
Sbjct: 76  QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 136 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  +++     +   + +  SL  + L  N +GD G AE     L  +  + T
Sbjct: 196 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG   + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 256 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C   A+     + +L  N  +  L +  N L D  V   C GL    S +     +L+
Sbjct: 316 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL----RVLW 371

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
            + C         LA +  + N +L  +DL+ N + D G   + ++++
Sbjct: 372 LADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGILQLVESVR 418



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 52  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 112 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 172 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 232 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 292 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 352 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 407



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 220 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 269

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 270 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 329

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 330 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 389

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 390 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 425


>gi|397527066|ref|XP_003833425.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Pan paniscus]
          Length = 953

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N I ++G  ++AR
Sbjct: 803 YLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922

Query: 498 NNTISILDLRANGLRDE 514
           N+ I+ + L  N ++ E
Sbjct: 923 NSGITEICLNGNLIKPE 939



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
           +N  +    LN
Sbjct: 922 SNSGITEICLN 932



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ NS IT + L  N I  + 
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNSGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVYED 946



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 1/231 (0%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L VL L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELQPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+  K L  L L  N I  EG + L   + + K  ++ + +  N +  +GA   AE ++N
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKYLALAVKNSKS-ISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  ++L  N I  EG + +A AL+QN ++  + L  N ++ + A ++A +LK N  +
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L L  N I A G   L++ L+ +  I  + L    I    A+   D  R
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQSNSGITEICLNGNLIKPEEAKVYEDEKR 949



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 81/153 (52%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  NS I  + LNGN
Sbjct: 902 WLIQNQITAKGTAQLADALQSNSGITEICLNGN 934



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNSG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 91/200 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L S  G   +   GN
Sbjct: 915 QLADALQSNSGITEICLNGN 934


>gi|114053011|ref|NP_001040578.1| ribonuclease/angiogenin inhibitor [Rattus norvegicus]
 gi|24527259|gb|AAL60586.1| ribonuclease/angiogenin inhibitor [Homo sapiens]
 gi|62548127|gb|AAO86769.2| ribonuclease/angiogenin inhibitor [Rattus norvegicus]
          Length = 461

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 182/430 (42%), Gaps = 19/430 (4%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSD---ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD----EV 515
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D    E+
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVAEL 361

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
           C G            S+  +L+ + C         LA +  + N +L  +DL+ N + D 
Sbjct: 362 CQG-------PGQPGSVLRVLWLADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDA 413

Query: 576 GAFAIAQALK 585
           G   + ++++
Sbjct: 414 GILQLVESVR 423



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 163/356 (45%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G   L +     G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 357 GVAELCQGPGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 47/219 (21%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELLKN----NSILRVLELNNNMIDYSGFTSLA 295
            +L  N  +  LQ+S+  L D G   +AEL +      S+LRVL L +  +  S  +SLA
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAG---VAELCQGPGQPGSVLRVLWLADCDVSDSSCSSLA 391

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
             LL N ++R L L+ N  G  G   L + +     L E
Sbjct: 392 ATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|15029922|gb|AAH11186.1| RNH1 protein, partial [Homo sapiens]
          Length = 447

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 177/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A  K     L+ N AL  LNL  N +GD GV C+   L
Sbjct: 7   AELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 66

Query: 243 -VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L+    L+ L L++N++  +G   L E LL+ 
Sbjct: 67  QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 126

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 127 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 186

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  +++     +   + +  SL  + L  N +GD G AE     L  +  + T
Sbjct: 187 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRT 246

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG   + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 247 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 306

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C   A+     + +L  N  +  L +  N L D  V   C GL    S +     +L+
Sbjct: 307 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL----RVLW 362

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
            + C         LA +  + N +L  +DL+ N + D G   + ++++
Sbjct: 363 LADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGILQLVESVR 409



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 43  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 102

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 103 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 162

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 163 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 222

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 223 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 282

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 283 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 342

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 343 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 398



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 211 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 260

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 261 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 320

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 321 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 380

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 381 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 416


>gi|5174617|ref|NP_006083.1| nucleotide-binding oligomerization domain-containing protein 1
           [Homo sapiens]
 gi|20137579|sp|Q9Y239.1|NOD1_HUMAN RecName: Full=Nucleotide-binding oligomerization domain-containing
           protein 1; AltName: Full=Caspase recruitment
           domain-containing protein 4
 gi|4731026|gb|AAD28350.1|AF113925_1 Nod1 [Homo sapiens]
 gi|4760400|gb|AAD29125.1|AF126484_1 CARD4 [Homo sapiens]
 gi|5478674|gb|AAD43922.1| NOD1 protein [Homo sapiens]
 gi|44211246|gb|AAS46897.1| unknown [Homo sapiens]
 gi|51105869|gb|EAL24453.1| caspase recruitment domain family, member 4 [Homo sapiens]
 gi|119614351|gb|EAW93945.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614352|gb|EAW93946.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614353|gb|EAW93947.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614355|gb|EAW93949.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
          Length = 953

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N I ++G  ++AR
Sbjct: 803 YLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 923 NTGITEICLNGNLIKPE 939



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
           +N  +    LN
Sbjct: 922 SNTGITEICLN 932



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ IT + L  N I  + 
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVYED 946



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L VL L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELQPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+  K L  L L  N I  EG + L   + + K  ++ + +  N +  +GA   AE ++N
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKYLALAVKNSKS-ISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  ++L  N I  EG + +A AL+QN ++  + L  N ++ + A ++A +LK N  +
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             L L  N I A G   L++ L+ +  I  + L
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQSNTGITEICL 931



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 81/153 (52%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 91/200 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L S  G   +   GN
Sbjct: 915 QLADALQSNTGITEICLNGN 934


>gi|25955661|gb|AAH40339.1| NOD1 protein [Homo sapiens]
          Length = 953

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N I ++G  ++AR
Sbjct: 803 YLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 923 NTGITEICLNGNLIKPE 939



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
           +N  +    LN
Sbjct: 922 SNTGITEICLN 932



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ IT + L  N I  + 
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVYED 946



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L VL L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELQPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+  K L  L L  N I  EG + L   + + K  ++ + +  N +  +GA   AE ++N
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKYLALAVKNSKS-ISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  ++L  N I  EG + +A AL+QN ++  + L  N ++ + A ++A +LK N  +
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             L L  N I A G   L++ L+ +  I  + L
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQSNTGITEICL 931



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 81/153 (52%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 91/200 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L S  G   +   GN
Sbjct: 915 QLADALQSNTGITEICLNGN 934


>gi|256066525|ref|XP_002570552.1| hypothetical protein [Schistosoma mansoni]
 gi|360043874|emb|CCD81420.1| putative leucine rich repeat-containing [Schistosoma mansoni]
          Length = 424

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 161/352 (45%), Gaps = 33/352 (9%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRD 260
           +T+  +      L     +  L+L  N I DEGV+ LC+ L VDN  +E L L   D+ +
Sbjct: 74  LTSVDLPPLCMALSLKPCITMLDLRYNFIKDEGVEILCEFLNVDNL-LEELNLMCNDITE 132

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           +GA+ +A  LKNN  L +L++  N I   G    A+AL  N T+  + L           
Sbjct: 133 KGAQFLANSLKNNRNLVILKMTGNPIGSKGGLYFAQALQINDTLEFIDLGECDQDITSCI 192

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           A A  L+ N+S                   M G++  +  L  L         +   H A
Sbjct: 193 AFATVLKSNRS-------------------MIGINLNRQILWTL-------QEESTVHFA 226

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +   K+L  ++L   D+ D GA ++A+AL++N T+  +D+  N +   GA  ++RV+ 
Sbjct: 227 DMLCINKTLKELHLAKCDMRDFGAARLAEALERNDTLELLDISANRVSRDGAILLSRVIS 286

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +  LDLA+N +   GA AL+  L ++ ++  L + +C++   G   +A+ L  N T
Sbjct: 287 INCTLVVLDLAFNRVQCKGAMALANALIYNTHLKVLAVQFCELKGPGLCALAESLITNLT 346

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA 552
           +  + +  N   +  C+    L + +  + +   +  Y      + G  CLA
Sbjct: 347 LECIYIWGNEHEESACNAFANLIYINRLLENCTDIKPY-----IVDGRTCLA 393



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 5/305 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+      DEG+  L E L  +   EE++   N IT  G +     L++N  L  
Sbjct: 91  CITMLDLRYNFIKDEGVEILCEFLNVDNLLEELNLMCNDITEKGAQFLANSLKNNRNLVI 150

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GNPIG +G       L  N  +E + L   D       A A +LK+N  +  + LN
Sbjct: 151 LKMTGNPIGSKGGLYFAQALQINDTLEFIDLGECDQDITSCIAFATVLKSNRSMIGINLN 210

Query: 283 NNM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +   +        A+ L  N T++ LHL        GA  LA+ LE N +L  L +  
Sbjct: 211 RQILWTLQEESTVHFADMLCINKTLKELHLAKCDMRDFGAARLAEALERNDTLELLDISA 270

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +  +G   L+S + S    L VLD+  N +  KGA  +A  +     L  + +   ++
Sbjct: 271 NRVSRDG-AILLSRVISINCTLVVLDLAFNRVQCKGAMALANALIYNTHLKVLAVQFCEL 329

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              G   +A++L  N T+  I + GN       +A A ++  N ++ +      P   DG
Sbjct: 330 KGPGLCALAESLITNLTLECIYIWGNEHEESACNAFANLIYINRLLENCT-DIKPYIVDG 388

Query: 460 AKALS 464
              L+
Sbjct: 389 RTCLA 393



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 39/295 (13%)

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           HL+     ++    L   L     +  L L  N I DEG+  L   L+     L  L++ 
Sbjct: 68  HLDAIQLTSVDLPPLCMALSLKPCITMLDLRYNFIKDEGVEILCEFLNV-DNLLEELNLM 126

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N I+ KGA  +A  +KN ++L+ + +  N IG +G    A AL+ N T+  IDLG  + 
Sbjct: 127 CNDITEKGAQFLANSLKNNRNLVILKMTGNPIGSKGGLYFAQALQINDTLEFIDLGECDQ 186

Query: 428 HSKGASAIARVLKDNSVITSLDLAYN---PIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
                 A A VLK N  +  ++L       +  +     +++L  +  +  L L  C + 
Sbjct: 187 DITSCIAFATVLKSNRSMIGINLNRQILWTLQEESTVHFADMLCINKTLKELHLAKCDMR 246

Query: 485 ASGAEFVADMLRYNNTISILDLRANGL-RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
             GA  +A+ L  N+T+ +LD+ AN + RD                              
Sbjct: 247 DFGAARLAEALERNDTLELLDISANRVSRD------------------------------ 276

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
              GA  L++   + N  L  +DLAFN ++  GA A+A AL  N  + V ++   
Sbjct: 277 ---GAILLSRVISI-NCTLVVLDLAFNRVQCKGAMALANALIYNTHLKVLAVQFC 327



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 8/236 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R    + M+G   G +G  + A++L  N T E +             AF  VL+SN ++ 
Sbjct: 146 RNLVILKMTGNPIGSKGGLYFAQALQINDTLEFIDLGECDQDITSCIAFATVLKSNRSMI 205

Query: 222 TLNLSGN---PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +NL+      + +E      D+L  N  ++ L L+  D+RD GA  +AE L+ N  L +
Sbjct: 206 GINLNRQILWTLQEESTVHFADMLCINKTLKELHLAKCDMRDFGAARLAEALERNDTLEL 265

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+++ N +   G   L+  +  N T+  L L  N     GA ALA  L  N  L+ L + 
Sbjct: 266 LDISANRVSRDGAILLSRVISINCTLVVLDLAFNRVQCKGAMALANALIYNTHLKVLAVQ 325

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGN-NSISAKGAF----HVAEYIKNCKSL 389
              +   G+ AL   L +      +   GN +  SA  AF    ++   ++NC  +
Sbjct: 326 FCELKGPGLCALAESLITNLTLECIYIWGNEHEESACNAFANLIYINRLLENCTDI 381


>gi|35844|emb|CAA32151.1| unnamed protein product [Homo sapiens]
 gi|190848|gb|AAA60249.1| ribonuclease/angiogenin inhibitor [Homo sapiens]
          Length = 461

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 155/363 (42%), Gaps = 11/363 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSD---ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD----EV 515
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D    E+
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361

Query: 516 CSG 518
           C G
Sbjct: 362 CQG 364



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALG 318
           L N ++R L L+ N  G  G
Sbjct: 395 LANHSLRELDLSNNCLGDAG 414


>gi|320170914|gb|EFW47813.1| hypothetical protein CAOG_05751 [Capsaspora owczarzaki ATCC 30864]
          Length = 426

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 38/240 (15%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           ERL L+   + D GA+A+AE LK +++L +LEL  N I   G  ++AEAL  N+ + +L 
Sbjct: 100 ERLFLNKQQIDDAGAEAVAEALKVSTLL-ILELETNQIGEGGARAIAEALKVNTPLTTLM 158

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G  GA A+A+ LE N +L  L L+ N IG  G +A+   L   +G         
Sbjct: 159 LHQNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRG--------- 209

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
                               L+ + L+ N IGD GA+ IA+ALK N+T+  ++L  N I 
Sbjct: 210 --------------------LIQLFLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIG 249

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG--------NINTLKLGW 480
             GA AIA  LK N ++  L L +N IG  G++AL E  K +G         IN L   W
Sbjct: 250 DAGAQAIAETLKVNKMLIELSLRWNCIGNRGSQALDEARKVNGFRELFSELQINPLVFSW 309



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 2/192 (1%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L+   I D G + + + L   + +  L+L +  + + GA+AIAE LK N+ L  L L+
Sbjct: 102 LFLNKQQIDDAGAEAVAEAL-KVSTLLILELETNQIGEGGARAIAEALKVNTPLTTLMLH 160

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I Y+G  ++AEAL  N T+  L LN N  GA GA A+A+ L+ N+ L +L LH N I
Sbjct: 161 QNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQLFLHENQI 220

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A+   L   K  L  L++  N I   GA  +AE +K  K L+ ++L  N IG+ 
Sbjct: 221 GDAGAQAIAEALKVNK-TLWRLNLDKNRIGDAGAQAIAETLKVNKMLIELSLRWNCIGNR 279

Query: 403 GAEKIADALKQN 414
           G++ + +A K N
Sbjct: 280 GSQALDEARKVN 291



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 106/218 (48%), Gaps = 30/218 (13%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           LN   ID +G  ++AEAL + ST+  L L  N  G  GA A+A+ L+ N  L  L LH N
Sbjct: 104 LNKQQIDDAGAEAVAEAL-KVSTLLILELETNQIGEGGARAIAEALKVNTPLTTLMLHQN 162

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IG                               GA  +AE ++   +L+++ L  N IG
Sbjct: 163 QIG-----------------------------YAGALAIAEALEVNDTLIYLGLNANQIG 193

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             GA+ IA+ALK NR +  + L  N I   GA AIA  LK N  +  L+L  N IG  GA
Sbjct: 194 AAGAQAIAEALKVNRGLIQLFLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGA 253

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           +A++E LK +  +  L L W  IG  G++ + +  + N
Sbjct: 254 QAIAETLKVNKMLIELSLRWNCIGNRGSQALDEARKVN 291



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K+   L L+   I D G  A+   L  +   L +L++  N I   GA  +AE +K    L
Sbjct: 97  KTRERLFLNKQQIDDAGAEAVAEAL--KVSTLLILELETNQIGEGGARAIAEALKVNTPL 154

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N IG  GA  IA+AL+ N T+  + L  N I + GA AIA  LK N  +  L 
Sbjct: 155 TTLMLHQNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQLF 214

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  GA+A++E LK +  +  L L   +IG +GA+ +A+ L+ N  +  L LR N
Sbjct: 215 LHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGAQAIAETLKVNKMLIELSLRWN 274

Query: 510 GLRDEVCSGCNGLSFFHSA--IYSLKHMLFYSLCINYL 545
                 C G  G      A  +   +  LF  L IN L
Sbjct: 275 ------CIGNRGSQALDEARKVNGFRE-LFSELQINPL 305



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 110/224 (49%), Gaps = 34/224 (15%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +    I   GA  VAE +K   +LL + L  N IG+ GA  IA+ALK N  +TT+ L 
Sbjct: 102 LFLNKQQIDDAGAEAVAEALK-VSTLLILELETNQIGEGGARAIAEALKVNTPLTTLMLH 160

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA AIA  L+ N  +  L L  N IGA GA+A++E LK +  +  L L   QI
Sbjct: 161 QNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQLFLHENQI 220

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G +GA+ +A+ L+ N T+  L+L  N + D                              
Sbjct: 221 GDAGAQAIAEALKVNKTLWRLNLDKNRIGD------------------------------ 250

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
              GA+ +A++ K VN+ L  + L +N I + G+ A+ +A K N
Sbjct: 251 --AGAQAIAETLK-VNKMLIELSLRWNCIGNRGSQALDEARKVN 291



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 12/197 (6%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L    I   GA A+A  LK ++++  L+L  N IG  GA+A++E LK +  + TL L   
Sbjct: 104 LNKQQIDDAGAEAVAEALKVSTLLI-LELETNQIGEGGARAIAEALKVNTPLTTLMLHQN 162

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           QIG +GA  +A+ L  N+T+  L L AN        G  G      A+   + ++   L 
Sbjct: 163 QIGYAGALAIAEALEVNDTLIYLGLNAN------QIGAAGAQAIAEALKVNRGLIQLFLH 216

Query: 542 INYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            N +   GA+ +A++ KV N+ L  ++L  N I D GA AIA+ LK N+   +  L+L  
Sbjct: 217 ENQIGDAGAQAIAEALKV-NKTLWRLNLDKNRIGDAGAQAIAETLKVNK--MLIELSLRW 273

Query: 600 NFLTKFGQSALTDAKDL 616
           N +   G  AL +A+ +
Sbjct: 274 NCIGNRGSQALDEARKV 290



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 98/194 (50%), Gaps = 1/194 (0%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F K  +    + ++ +   D G   +AE+L  + T   +    N I   G +A    L+ 
Sbjct: 92  FNKVWKTRERLFLNKQQIDDAGAEAVAEALKVS-TLLILELETNQIGEGGARAIAEALKV 150

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L TL L  N IG  G   + + L  N  +  L L++  +   GA+AIAE LK N  L
Sbjct: 151 NTPLTTLMLHQNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGL 210

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L+ N I  +G  ++AEAL  N T+  L+L+ N  G  GA A+A+ L+ NK L EL 
Sbjct: 211 IQLFLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGAQAIAETLKVNKMLIELS 270

Query: 337 LHGNSIGDEGIRAL 350
           L  N IG+ G +AL
Sbjct: 271 LRWNCIGNRGSQAL 284



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++     G+ G   +AE+L  N     +    N I  AG  A    L+ N  L  L L+
Sbjct: 129 LELETNQIGEGGARAIAEALKVNTPLTTLMLHQNQIGYAGALAIAEALEVNDTLIYLGLN 188

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IG  G + + + L  N G+ +L L    + D GA+AIAE LK N  L  L L+ N I
Sbjct: 189 ANQIGAAGAQAIAEALKVNRGLIQLFLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRI 248

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
             +G  ++AE L  N  +  L L  N  G  G+ AL +  + N   REL
Sbjct: 249 GDAGAQAIAETLKVNKMLIELSLRWNCIGNRGSQALDEARKVN-GFREL 296



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 65/134 (48%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++ +     G  G   +AE+L  N T   +   AN I AAG +A    L+ N  L  L
Sbjct: 154 LTTLMLHQNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQL 213

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N IGD G + + + L  N  + RL L    + D GA+AIAE LK N +L  L L  
Sbjct: 214 FLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGAQAIAETLKVNKMLIELSLRW 273

Query: 284 NMIDYSGFTSLAEA 297
           N I   G  +L EA
Sbjct: 274 NCIGNRGSQALDEA 287


>gi|227809548|gb|ACP40992.1| NLRC5 [Mus musculus]
          Length = 1915

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 155/349 (44%), Gaps = 7/349 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            + +S    G   L  L + L      +++  + N I   G +    +L     L+  +LS
Sbjct: 1553 LHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLS 1612

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD G +CL  IL     + +  LS   +   G + +A +L     LR  +L+ N I
Sbjct: 1613 HNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQI 1672

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
               G   LA  L +   +R   L+GN  G  G   L K L   + L E+ L  N++G+  
Sbjct: 1673 GDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPT 1732

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
               L   L     +L VL + ++ +  +GA  +A+ ++ C  +  ++L  N++   G  +
Sbjct: 1733 ALELAQRLPP---QLRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLAENNLAG-GVPR 1788

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
             +  L   R    IDL    I  + A  +A  L     +  L L+ N +G + A  L++V
Sbjct: 1789 FSKRLPLLR---QIDLEFCKIEDQAARHLAANLTLFPALEKLLLSGNLLGDEVAAELAQV 1845

Query: 467  LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
            L   G +  + L W +I A GA+ +A  L   + + ++ L  N + ++V
Sbjct: 1846 LPQMGQLKKVNLEWNRITARGAQLLAQGLVQGSCVPVIRLWNNPILNDV 1894



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 10/305 (3%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
             ELR F   D+S    GD G   LA  L       + + + N I   G +    +L    
Sbjct: 1604 PELRKF---DLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLP 1660

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L+  +LS N IGD G +CL  IL     + +  LS   +   G   + + L +   L  
Sbjct: 1661 ELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEE 1720

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            ++L NN +       LA+ L     +R L L  ++ G  GA  LA+ LE    + E+ L 
Sbjct: 1721 IKLGNNALGEPTALELAQRL--PPQLRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLA 1778

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N++     R      S R   L  +D+    I  + A H+A  +    +L  + L  N 
Sbjct: 1779 ENNLAGGVPR-----FSKRLPLLRQIDLEFCKIEDQAARHLAANLTLFPALEKLLLSGNL 1833

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GDE A ++A  L Q   +  ++L  N I ++GA  +A+ L   S +  + L  NPI  D
Sbjct: 1834 LGDEVAAELAQVLPQMGQLKKVNLEWNRITARGAQLLAQGLVQGSCVPVIRLWNNPILND 1893

Query: 459  GAKAL 463
             A++L
Sbjct: 1894 VAQSL 1898



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 164/393 (41%), Gaps = 18/393 (4%)

Query: 236  KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
            K L +IL+ +  ++  +L+   +  +    +A  L +   L  L+ +NN +       L 
Sbjct: 1482 KLLQNILLSSCELKSFRLTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLM 1541

Query: 296  EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             AL     ++ LHL+    GA     L +GL     L++L L  N IGD G + L + + 
Sbjct: 1542 GALQGTCRLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCL-AAIL 1600

Query: 356  SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
             +  +L   D+ +N I   G   +A  +     L   NL  N IG  G + +A  L +  
Sbjct: 1601 PKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLP 1660

Query: 416  TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
             +   DL  N I   G   +A +L     +   DL+ N IG  G   L + L    ++  
Sbjct: 1661 ELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEE 1720

Query: 476  LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHM 535
            +KLG   +G   A  +A   R    + +L L ++ L  E   G  GL+    A+    H+
Sbjct: 1721 IKLGNNALGEPTALELAQ--RLPPQLRVLCLPSSHLGPE---GALGLA---QALEQCPHI 1772

Query: 536  LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
               SL  N L G       F      L  IDL F +I D  A  +A  L      A+  L
Sbjct: 1773 EEVSLAENNLAGG---VPRFSKRLPLLRQIDLEFCKIEDQAARHLAANLTLFP--ALEKL 1827

Query: 596  NLANNFLTKFGQSALTDAKDLVYEMSE-KEVNI 627
             L+ N L   G     +   ++ +M + K+VN+
Sbjct: 1828 LLSGNLL---GDEVAAELAQVLPQMGQLKKVNL 1857



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 142/353 (40%), Gaps = 57/353 (16%)

Query: 192  AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
             E +SF +     A  +A    L +  +LKTL L+G+ I  +G+  L   L   + +E +
Sbjct: 691  VENLSFKSRKCGDAFAEALCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEV 750

Query: 252  QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
             L    L+D    ++ ELL +   L+ L+L+ N    S   SL +  +   T+R L +  
Sbjct: 751  SLHDNQLKDPEVLSLVELLPSLPKLQKLDLSRNSFSRSILLSLVKVAITCPTVRKLQVRE 810

Query: 312  ----NYGGALGANAL----AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
                 Y   +   A     A  ++G  SL+E    G S      R+L   L  +K +L +
Sbjct: 811  LDLIFYLSPVTETATQQSGASDVQGKDSLKE----GQS------RSLQ--LRLQKCQLRI 858

Query: 364  LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
             D          A  + E  +    L  +NL  N + D+G   +A+A  Q      +DL 
Sbjct: 859  RD----------AEALVELFQKSPQLEEVNLSRNHLEDDGCRLVAEAASQLHIAQKLDLS 908

Query: 424  GNNIHSKGASAIARVLK-------------DNSVITSLDLAYNPIGADGA-KALSEVLKF 469
             N +   G + + + +              +N+V+  L  A  P   +G+ K  + ++ F
Sbjct: 909  DNGLSQTGVTYVLKAMSTCGTLEDLHISLLNNTVV--LTFAQEPREQEGSCKGRAPLISF 966

Query: 470  HGNINT--------LKLGWCQIGASGAEFVADMLR---YNNTISILDLRANGL 511
               + +        ++L  C   A   E + + LR     + +  LDL  N L
Sbjct: 967  VSPVTSELSQRSRRIRLTHCGFLAKHTETLCEALRASCQTHNLDHLDLSDNSL 1019



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 133/339 (39%), Gaps = 37/339 (10%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            +  ++ ++G     +G+  L ++L      EEVS   N +    + +   +L S   L+ 
Sbjct: 718  SLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVELLPSLPKLQK 777

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+LS N      +  L  + +    V +LQ+  +DL          +   + +       
Sbjct: 778  LDLSRNSFSRSILLSLVKVAITCPTVRKLQVRELDL----------IFYLSPVTETATQQ 827

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +   D  G  SL E     S    L L         A AL +  + +  L E++L  N +
Sbjct: 828  SGASDVQGKDSLKEG---QSRSLQLRLQKCQLRIRDAEALVELFQKSPQLEEVNLSRNHL 884

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDI- 399
             D+G R L++  +S+      LD+ +N +S  G  +V + +  C +L  L I+L  N + 
Sbjct: 885  EDDGCR-LVAEAASQLHIAQKLDLSDNGLSQTGVTYVLKAMSTCGTLEDLHISLLNNTVV 943

Query: 400  --------GDEGAEK-----------IADALKQ-NRTITTIDLGGNNIHSKGASAIARVL 439
                      EG+ K           +   L Q +R I     G    H++      R  
Sbjct: 944  LTFAQEPREQEGSCKGRAPLISFVSPVTSELSQRSRRIRLTHCGFLAKHTETLCEALRAS 1003

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
                 +  LDL+ N +G  G   L+E+L   G + +L L
Sbjct: 1004 CQTHNLDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNL 1042



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 105/482 (21%), Positives = 178/482 (36%), Gaps = 52/482 (10%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G  L +E  +TL     +  A S +D++    GD GL  L E L     +  +  + 
Sbjct: 1219 GFPGCSLSQEHMETLCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSH 1278

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N I+  GI      L S   ++ +++S   +  E +  +C    + AG   L+L      
Sbjct: 1279 NNISQEGILYLLETLPSYPNIQEVSVS---LSSEQIFRMCFSKKEGAGTS-LRLCECSFS 1334

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
             E    +A  L     L  L L    +D    T L   +   + +  L L   +  ++  
Sbjct: 1335 PEQVSKLASSLSQAQQLTELWLTKCHLDLPQLTMLLNLVNRPTGLLGLRLEEPWVDSVSL 1394

Query: 320  NAL------AKGLEGNKSLREL-----------HLHGNSIGDEGIR-----------ALM 351
             AL      A G     S+ E+           H  GNS     +R            LM
Sbjct: 1395 PALMEVCAQASGCLTELSISEIQRKLWLQLEFPHQEGNS-DSMALRLAHCDLETEHSHLM 1453

Query: 352  SGLSSRKGKLAVLDIG------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              L     +L  L +       N+  S+K   ++   + +C+ L    L  + +  +   
Sbjct: 1454 IQLVETYARLQQLSLSQVSFNDNDGTSSKLLQNI--LLSSCE-LKSFRLTFSQVSTKSLT 1510

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             +A  L     +  +D   N++  +    +   L+    +  L L++ P+GA     L +
Sbjct: 1511 HLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQ 1570

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
             L     +  L L   QIG  G + +A +L     +   DL  N + D       G    
Sbjct: 1571 GLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGD------VGTQCL 1624

Query: 526  HSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
             + +  L  +  ++L  N +   G +CLA     + E L   DL+ N+I D G   +A  
Sbjct: 1625 AAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPE-LRKFDLSRNQIGDVGTQCLAAI 1683

Query: 584  LK 585
            L 
Sbjct: 1684 LP 1685


>gi|290990760|ref|XP_002678004.1| predicted protein [Naegleria gruberi]
 gi|284091614|gb|EFC45260.1| predicted protein [Naegleria gruberi]
          Length = 561

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 9/226 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  S+ +   N GDE L  LA  L  NQT   +  + N I+  GI      L  NI LK 
Sbjct: 320 SLKSLSIVNCNVGDEHLKLLAHGLADNQTITSLDMSFNLISDFGICDLIDGLFINITLKR 379

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS N IG+ G   L D+L+ N  ++RL +S   +  +GAK+I++ L +NS+L+ L+L 
Sbjct: 380 LTLSHNNIGNVGCVYLSDLLLGNVSLKRLDISYNRVGSDGAKSISKALCSNSLLKRLDLG 439

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK----GLEGNKSLRELHLH 338
           +N I   G ++LAE L  N T+ +L L+ N   A+G+  L +    G+  N+ L++L LH
Sbjct: 440 HNNIGDEGCSALAEGLKANKTLATLDLSFN---AIGSEGLIRLCNDGILYNRGLKDLSLH 496

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS-ISAKGAFHVAEYI 383
           GN   + G ++L+  L   K  L  +DIGNN  I   G   +A+ +
Sbjct: 497 GNPFDNAGAKSLVKALIDHK-TLKRVDIGNNEKIGVDGIGTIAQTL 541



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 127/238 (53%), Gaps = 3/238 (1%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +  S ++LK+L++    +GDE +K L   L DN  +  L +S   + D G   + + L  
Sbjct: 314 IQSSRVSLKSLSIVNCNVGDEHLKLLAHGLADNQTITSLDMSFNLISDFGICDLIDGLFI 373

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L+ L L++N I   G   L++ LL N +++ L ++ N  G+ GA +++K L  N  L
Sbjct: 374 NITLKRLTLSHNNIGNVGCVYLSDLLLGNVSLKRLDISYNRVGSDGAKSISKALCSNSLL 433

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLW 391
           + L L  N+IGDEG  AL  GL + K  LA LD+  N+I ++G   +  + I   + L  
Sbjct: 434 KRLDLGHNNIGDEGCSALAEGLKANK-TLATLDLSFNAIGSEGLIRLCNDGILYNRGLKD 492

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN-NIHSKGASAIARVLKDNSVITSL 448
           ++L+ N   + GA+ +  AL  ++T+  +D+G N  I   G   IA+ L    +I +L
Sbjct: 493 LSLHGNPFDNAGAKSLVKALIDHKTLKRVDIGNNEKIGVDGIGTIAQTLTTKYMIGNL 550



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 8/217 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+DMS     D G+  L + L  N T + ++ + N I   G      +L  N++LK
Sbjct: 347 QTITSLDMSFNLISDFGICDLIDGLFINITLKRLTLSHNNIGNVGCVYLSDLLLGNVSLK 406

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L++S N +G +G K +   L  N+ ++RL L   ++ DEG  A+AE LK N  L  L+L
Sbjct: 407 RLDISYNRVGSDGAKSISKALCSNSLLKRLDLGHNNIGDEGCSALAEGLKANKTLATLDL 466

Query: 282 NNNMIDYSGFTSLA-EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           + N I   G   L  + +L N  ++ L L+GN     GA +L K L  +K+L+ + +  N
Sbjct: 467 SFNAIGSEGLIRLCNDGILYNRGLKDLSLHGNPFDNAGAKSLVKALIDHKTLKRVDIGNN 526

Query: 341 S-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             IG +GI  +   L+++        IGN  +  KGA
Sbjct: 527 EKIGVDGIGTIAQTLTTK------YMIGNLVMRRKGA 557



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 40/258 (15%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SL+ L +   ++GDE ++ L  GL+            N +I++                 
Sbjct: 320 SLKSLSIVNCNVGDEHLKLLAHGLAD-----------NQTITS----------------- 351

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +++  N I D G   + D L  N T+  + L  NNI + G   ++ +L  N  +  LD+
Sbjct: 352 -LDMSFNLISDFGICDLIDGLFINITLKRLTLSHNNIGNVGCVYLSDLLLGNVSLKRLDI 410

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           +YN +G+DGAK++S+ L  +  +  L LG   IG  G   +A+ L+ N T++ LDL  N 
Sbjct: 411 SYNRVGSDGAKSISKALCSNSLLKRLDLGHNNIGDEGCSALAEGLKANKTLATLDLSFNA 470

Query: 511 LRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDL 567
           +  E +   CN    ++  +  L      SL  N     GAK L ++  + ++ L  +D+
Sbjct: 471 IGSEGLIRLCNDGILYNRGLKDL------SLHGNPFDNAGAKSLVKAL-IDHKTLKRVDI 523

Query: 568 AFNE-IRDDGAFAIAQAL 584
             NE I  DG   IAQ L
Sbjct: 524 GNNEKIGVDGIGTIAQTL 541



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 33/172 (19%)

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           N+  +    +A  L DN  ITSLD+++N I   G   L + L  +  +  L L    IG 
Sbjct: 330 NVGDEHLKLLAHGLADNQTITSLDMSFNLISDFGICDLIDGLFINITLKRLTLSHNNIGN 389

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            G  +++D+L  N ++  LD+  N +  +                               
Sbjct: 390 VGCVYLSDLLLGNVSLKRLDISYNRVGSD------------------------------- 418

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
            GAK ++++    N  L  +DL  N I D+G  A+A+ LKAN+ +A   L+ 
Sbjct: 419 -GAKSISKAL-CSNSLLKRLDLGHNNIGDEGCSALAEGLKANKTLATLDLSF 468


>gi|281208565|gb|EFA82741.1| hypothetical protein PPL_04436 [Polysphondylium pallidum PN500]
          Length = 280

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 138/263 (52%), Gaps = 3/263 (1%)

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLS 254
            ++N I   G  +F  V+  N  + +L+LS N I  +GV  + +  ++N  + +  + LS
Sbjct: 1   MSSNCIEDEGAASFAAVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLS 60

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +  +GA+A+AE L  +  LR +   +N I+  G   L++++++N T+ SL L+ N  
Sbjct: 61  CNTICPKGARAMAEALSVDCALRHINFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLI 120

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G   L++ L  N ++  L L  + I  EGI+ L+S L S    L  LD+  N I  K
Sbjct: 121 GNEGIKYLSQALLENNTIVSLSLSQSLIAYEGIKYLVS-LISLNHTLTFLDLSYNFIGPK 179

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  ++  ++N K++  ++L  N IGD+GA  IA    +N T+  + L  N I  KGA  
Sbjct: 180 GAEELSLSLENNKTITSLDLSSNSIGDDGATAIAGIFPKNNTLQRLSLYNNKIGPKGAKP 239

Query: 435 IARVLKDNSVITSLDLAYNPIGA 457
           I   L  N  + S++L  N I A
Sbjct: 240 IVENLLKNHSLYSINLLANRIDA 262



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 5/238 (2%)

Query: 165 SSVDMSGRNFGDEGLFFLAESL--GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +S+D+S      +G+  +A +     N T   +  + N I   G +A    L  + AL+ 
Sbjct: 25  TSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLSCNTICPKGARAMAEALSVDCALRH 84

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLEL 281
           +N   N I  +G   L   ++ N  +  L+LS+  + +EG K +++ LL+NN+I+  L L
Sbjct: 85  INFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLIGNEGIKYLSQALLENNTIVS-LSL 143

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + ++I Y G   L   +  N T+  L L+ N+ G  GA  L+  LE NK++  L L  NS
Sbjct: 144 SQSLIAYEGIKYLVSLISLNHTLTFLDLSYNFIGPKGAEELSLSLENNKTITSLDLSSNS 203

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           IGD+G  A ++G+  +   L  L + NN I  KGA  + E +    SL  INL  N I
Sbjct: 204 IGDDGATA-IAGIFPKNNTLQRLSLYNNKIGPKGAKPIVENLLKNHSLYSINLLANRI 260



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 3/274 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL--QSNIALKTLNLS 226
           MS     DEG    A  + +N T   +  + N I + G+           N  + +++LS
Sbjct: 1   MSSNCIEDEGAASFAAVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLS 60

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  +G + + + L  +  +  +   S ++  +GA  +++ +  N  L  LEL+ N+I
Sbjct: 61  CNTICPKGARAMAEALSVDCALRHINFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLI 120

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   L++ALLEN+TI SL L+ +     G   L   +  N +L  L L  N IG +G
Sbjct: 121 GNEGIKYLSQALLENNTIVSLSLSQSLIAYEGIKYLVSLISLNHTLTFLDLSYNFIGPKG 180

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
              L   L + K  +  LD+ +NSI   GA  +A       +L  ++LY N IG +GA+ 
Sbjct: 181 AEELSLSLENNK-TITSLDLSSNSIGDDGATAIAGIFPKNNTLQRLSLYNNKIGPKGAKP 239

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           I + L +N ++ +I+L  N I +     I + L+
Sbjct: 240 IVENLLKNHSLYSINLLANRIDAYILKPIVKRLE 273



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 13/235 (5%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN--RTITTIDLG 423
           + +N I  +GA   A  + +  ++  ++L +N I  +G  +IA+A  +N   TIT+IDL 
Sbjct: 1   MSSNCIEDEGAASFAAVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLS 60

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I  KGA A+A  L  +  +  ++   N I  DGA  LS+ +  +  + +L+L    I
Sbjct: 61  CNTICPKGARAMAEALSVDCALRHINFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLI 120

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML-FYSLCI 542
           G  G ++++  L  NNTI  L L  + +  E      G+ +  S I SL H L F  L  
Sbjct: 121 GNEGIKYLSQALLENNTIVSLSLSQSLIAYE------GIKYLVSLI-SLNHTLTFLDLSY 173

Query: 543 NYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           N++  +GA+ L+ S +  N+ +TS+DL+ N I DDGA AIA     N  +   SL
Sbjct: 174 NFIGPKGAEELSLSLEN-NKTITSLDLSSNSIGDDGATAIAGIFPKNNTLQRLSL 227



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 135/256 (52%), Gaps = 6/256 (2%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG-LSSRKGKLAVLDIGNNSISAKGA 376
           GA + A  +  N ++  L L  N I  +G+  + +  L +    +  +D+  N+I  KGA
Sbjct: 10  GAASFAAVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLSCNTICPKGA 69

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             +AE +    +L  IN + N+I  +GA +++ ++ +N T+T+++L  N I ++G   ++
Sbjct: 70  RAMAEALSVDCALRHINFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLIGNEGIKYLS 129

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + L +N+ I SL L+ + I  +G K L  ++  +  +  L L +  IG  GAE ++  L 
Sbjct: 130 QALLENNTIVSLSLSQSLIAYEGIKYLVSLISLNHTLTFLDLSYNFIGPKGAEELSLSLE 189

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
            N TI+ LDL +N + D+   G   ++       +L+ +  Y+  I   +GAK + ++  
Sbjct: 190 NNKTITSLDLSSNSIGDD---GATAIAGIFPKNNTLQRLSLYNNKIGP-KGAKPIVENL- 244

Query: 557 VVNEALTSIDLAFNEI 572
           + N +L SI+L  N I
Sbjct: 245 LKNHSLYSINLLANRI 260



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 95/192 (49%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             +S+D+S      +G   +AE+L  +     ++F +N I   G       +  N  L +
Sbjct: 53  TITSIDLSCNTICPKGARAMAEALSVDCALRHINFFSNNIETDGAYELSKSIIKNHTLTS 112

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS N IG+EG+K L   L++N  +  L LS   +  EG K +  L+  N  L  L+L+
Sbjct: 113 LELSTNLIGNEGIKYLSQALLENNTIVSLSLSQSLIAYEGIKYLVSLISLNHTLTFLDLS 172

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G   L+ +L  N TI SL L+ N  G  GA A+A     N +L+ L L+ N I
Sbjct: 173 YNFIGPKGAEELSLSLENNKTITSLDLSSNSIGDDGATAIAGIFPKNNTLQRLSLYNNKI 232

Query: 343 GDEGIRALMSGL 354
           G +G + ++  L
Sbjct: 233 GPKGAKPIVENL 244



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 87/166 (52%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
              +S+++S    G+EG+ +L+++L  N T   +S + + I   GIK    ++  N  L 
Sbjct: 108 HTLTSLELSTNLIGNEGIKYLSQALLENNTIVSLSLSQSLIAYEGIKYLVSLISLNHTLT 167

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+LS N IG +G + L   L +N  +  L LSS  + D+GA AIA +   N+ L+ L L
Sbjct: 168 FLDLSYNFIGPKGAEELSLSLENNKTITSLDLSSNSIGDDGATAIAGIFPKNNTLQRLSL 227

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            NN I   G   + E LL+N ++ S++L  N   A     + K LE
Sbjct: 228 YNNKIGPKGAKPIVENLLKNHSLYSINLLANRIDAYILKPIVKRLE 273



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 90/180 (50%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   ++    N   +G + L++S+  N T   +  + N I   GIK     L  N  + +
Sbjct: 81  ALRHINFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLIGNEGIKYLSQALLENNTIVS 140

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS + I  EG+K L  ++  N  +  L LS   +  +GA+ ++  L+NN  +  L+L+
Sbjct: 141 LSLSQSLIAYEGIKYLVSLISLNHTLTFLDLSYNFIGPKGAEELSLSLENNKTITSLDLS 200

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G T++A    +N+T++ L L  N  G  GA  + + L  N SL  ++L  N I
Sbjct: 201 SNSIGDDGATAIAGIFPKNNTLQRLSLYNNKIGPKGAKPIVENLLKNHSLYSINLLANRI 260



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 5/80 (6%)

Query: 552 AQSFKVV---NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
           A SF  V   N  +TS+DL+ N I  DG   IA A   N +  +TS++L+ N +   G  
Sbjct: 11  AASFAAVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLSCNTICPKGAR 70

Query: 609 ALTDAKDLVYEMSEKEVNIF 628
           A+ +A  L  + + + +N F
Sbjct: 71  AMAEA--LSVDCALRHINFF 88


>gi|432106177|gb|ELK32070.1| Ribonuclease inhibitor [Myotis davidii]
          Length = 428

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 178/414 (42%), Gaps = 34/414 (8%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V     GIT    K     L+ N AL  L+LS N +GD G + +   L     +++L L 
Sbjct: 28  VRLVDCGITEGRCKDVSSALRDNPALTELSLSSNEMGDAGTQLVLQSLHPTCKIQKLSLQ 87

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNY 313
           S  L + G  A++ LL++   LR L+L+ N +  +G   L E LL+    I  LHL  + 
Sbjct: 88  SCHLSEAGCGALSSLLRSMPSLRELDLSYNQLKDAGLQLLCEGLLDPQCHIERLHLEYSN 147

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
             A    ALA  L   + L+ L +  N  G+ G R L  GL+     L  + +    ++A
Sbjct: 148 LTAASCEALASVLRAKRELKVLGVSNNDFGEAGTRTLCQGLADSTCPLESIRLEGCGLTA 207

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGA 432
                +   +    SL  + L  N +GD G  ++    L     + T+ L   +  + G 
Sbjct: 208 ANCQDLGGIVAAKASLSELQLGNNKLGDAGIAQLCPGLLSPGSRLQTLWLWECDFTASGC 267

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
             + +VL+    +  L +A N +G +GA+ L     F   +  +K   C + A+    V+
Sbjct: 268 KDLCQVLRAKESLKELSVAGNEVGDEGARLL-----FGLRVPRMK--SCGLTAACCPHVS 320

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA 552
            ML  N ++  L +  N L DE      G+ F   ++ SL      S       G   L 
Sbjct: 321 AMLARNRSLQELQMSNNKLGDE------GMEFRLGSVSSLCSPGDGS-------GLGVLV 367

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           +  +V +           E+ D G  ++A  L AN   ++  L+L+NN L++ G
Sbjct: 368 RDGRVGD----------CEVTDQGCTSLAALLLANR--SLLELDLSNNCLSEVG 409



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 175/370 (47%), Gaps = 33/370 (8%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + + +S    GD G   + +SL      +++S  +  ++ AG  A   +L+S  +L+ 
Sbjct: 52  ALTELSLSSNEMGDAGTQLVLQSLHPTCKIQKLSLQSCHLSEAGCGALSSLLRSMPSLRE 111

Query: 223 LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS N + D G++ LC+ L+D    +ERL L   +L     +A+A +L+    L+VL +
Sbjct: 112 LDLSYNQLKDAGLQLLCEGLLDPQCHIERLHLEYSNLTAASCEALASVLRAKRELKVLGV 171

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +NN    +G  +L + L +++  + S+ L G    A     L   +    SL EL L  N
Sbjct: 172 SNNDFGEAGTRTLCQGLADSTCPLESIRLEGCGLTAANCQDLGGIVAAKASLSELQLGNN 231

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD GI  L  GL S   +L  L +     +A G   + + ++  +SL  +++  N++G
Sbjct: 232 KLGDAGIAQLCPGLLSPGSRLQTLWLWECDFTASGCKDLCQVLRAKESLKELSVAGNEVG 291

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DEGA ++   L+  R  +        + +     ++ +L  N  +  L ++ N +G +G 
Sbjct: 292 DEGA-RLLFGLRVPRMKSC------GLTAACCPHVSAMLARNRSLQELQMSNNKLGDEG- 343

Query: 461 KALSEVLKFH-GNINTL----------------KLGWCQIGASGAEFVADMLRYNNTISI 503
                 ++F  G++++L                ++G C++   G   +A +L  N ++  
Sbjct: 344 ------MEFRLGSVSSLCSPGDGSGLGVLVRDGRVGDCEVTDQGCTSLAALLLANRSLLE 397

Query: 504 LDLRANGLRD 513
           LDL  N L +
Sbjct: 398 LDLSNNCLSE 407



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 135/332 (40%), Gaps = 49/332 (14%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDG 212
           L+   + + +   +D+S     D GL  L E L   Q   E +    + +TAA  +A   
Sbjct: 99  LSSLLRSMPSLRELDLSYNQLKDAGLQLLCEGLLDPQCHIERLHLEYSNLTAASCEALAS 158

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLK 271
           VL++   LK L +S N  G+ G + LC  L D+   +E ++L    L     + +  ++ 
Sbjct: 159 VLRAKRELKVLGVSNNDFGEAGTRTLCQGLADSTCPLESIRLEGCGLTAANCQDLGGIVA 218

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
             + L  L+L NN +  +G   L   LL   S +++L L      A G   L + L   +
Sbjct: 219 AKASLSELQLGNNKLGDAGIAQLCPGLLSPGSRLQTLWLWECDFTASGCKDLCQVLRAKE 278

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SL+EL + GN +GDEG R L          L V  + +  ++A    HV+  +   +SL 
Sbjct: 279 SLKELSVAGNEVGDEGARLLFG--------LRVPRMKSCGLTAACCPHVSAMLARNRSLQ 330

Query: 391 WINLYMNDIGDEGAE-------------------------KIADA-------------LK 412
            + +  N +GDEG E                         ++ D              L 
Sbjct: 331 ELQMSNNKLGDEGMEFRLGSVSSLCSPGDGSGLGVLVRDGRVGDCEVTDQGCTSLAALLL 390

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            NR++  +DL  N +   G   +A   +  S 
Sbjct: 391 ANRSLLELDLSNNCLSEVGVMKVAESARQPSC 422


>gi|254692966|ref|NP_001028379.2| protein NLRC5 [Mus musculus]
 gi|306756308|sp|C3VPR6.2|NLRC5_MOUSE RecName: Full=Protein NLRC5
          Length = 1915

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 155/349 (44%), Gaps = 7/349 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            + +S    G   L  L + L      +++  + N I   G +    +L     L+  +LS
Sbjct: 1553 LHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLS 1612

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD G +CL  IL     + +  LS   +   G + +A +L     LR  +L+ N I
Sbjct: 1613 HNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQI 1672

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
               G   LA  L +   +R   L+GN  G  G   L K L   + L E+ L  N++G+  
Sbjct: 1673 GDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPT 1732

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
               L   L     +L VL + ++ +  +GA  +A+ ++ C  +  ++L  N++   G  +
Sbjct: 1733 ALELAQRLPP---QLRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLAENNLAG-GVPR 1788

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
             +  L   R    IDL    I  + A  +A  L     +  L L+ N +G + A  L++V
Sbjct: 1789 FSKRLPLLR---QIDLEFCKIEDQAARHLAANLTLFPALEKLLLSGNLLGDEVAAELAQV 1845

Query: 467  LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
            L   G +  + L W +I A GA+ +A  L   + + ++ L  N + ++V
Sbjct: 1846 LPQMGQLKKVNLEWNRITARGAQLLAQGLVQGSCVPVIRLWNNPILNDV 1894



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 10/305 (3%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
             ELR F   D+S    GD G   LA  L       + + + N I   G +    +L    
Sbjct: 1604 PELRKF---DLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLP 1660

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L+  +LS N IGD G +CL  IL     + +  LS   +   G   + + L +   L  
Sbjct: 1661 ELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEE 1720

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            ++L NN +       LA+ L     +R L L  ++ G  GA  LA+ LE    + E+ L 
Sbjct: 1721 IKLGNNALGEPTALELAQRL--PPQLRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLA 1778

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N++     R      S R   L  +D+    I  + A H+A  +    +L  + L  N 
Sbjct: 1779 ENNLAGGVPR-----FSKRLPLLRQIDLEFCKIEDQAARHLAANLTLFPALEKLLLSGNL 1833

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GDE A ++A  L Q   +  ++L  N I ++GA  +A+ L   S +  + L  NPI  D
Sbjct: 1834 LGDEVAAELAQVLPQMGQLKKVNLEWNRITARGAQLLAQGLVQGSCVPVIRLWNNPILND 1893

Query: 459  GAKAL 463
             A++L
Sbjct: 1894 VAQSL 1898



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 164/393 (41%), Gaps = 18/393 (4%)

Query: 236  KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
            K L +IL+ +  ++  +L+   +  +    +A  L +   L  L+ +NN +       L 
Sbjct: 1482 KLLQNILLSSCELKSFRLTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLM 1541

Query: 296  EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             AL     ++ LHL+    GA     L +GL     L++L L  N IGD G + L + + 
Sbjct: 1542 GALQGTCRLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCL-AAIL 1600

Query: 356  SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
             +  +L   D+ +N I   G   +A  +     L   NL  N IG  G + +A  L +  
Sbjct: 1601 PKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLP 1660

Query: 416  TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
             +   DL  N I   G   +A +L     +   DL+ N IG  G   L + L    ++  
Sbjct: 1661 ELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEE 1720

Query: 476  LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHM 535
            +KLG   +G   A  +A   R    + +L L ++ L  E   G  GL+    A+    H+
Sbjct: 1721 IKLGNNALGEPTALELAQ--RLPPQLRVLCLPSSHLGPE---GALGLA---QALEQCPHI 1772

Query: 536  LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
               SL  N L G       F      L  IDL F +I D  A  +A  L      A+  L
Sbjct: 1773 EEVSLAENNLAGG---VPRFSKRLPLLRQIDLEFCKIEDQAARHLAANLTLFP--ALEKL 1827

Query: 596  NLANNFLTKFGQSALTDAKDLVYEMSE-KEVNI 627
             L+ N L   G     +   ++ +M + K+VN+
Sbjct: 1828 LLSGNLL---GDEVAAELAQVLPQMGQLKKVNL 1857



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 137/353 (38%), Gaps = 67/353 (18%)

Query: 192  AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
             E +SF +     A  +A    L +  +LKTL L+G+ I  +G+  L   L   + +E +
Sbjct: 691  VENLSFKSRKCGDAFAEALCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEV 750

Query: 252  QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN- 310
             L    L+D    ++ ELL +   L+ L+L+ N    S   SL +  +   T+R L +  
Sbjct: 751  SLHDNQLKDPEVLSLVELLPSLPKLQKLDLSRNSFSRSILLSLVKVAITCPTVRKLQVRE 810

Query: 311  --------------GNYGGA----------------------------LGANALAKGLEG 328
                              GA                              A AL +  + 
Sbjct: 811  LDLIFYLSPVTETATQQSGASDVQGKDSLKEGQSRSLQLRLQKCQLRIRDAEALVELFQK 870

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            +  L E++L GN + D+G R L++  +S+      LD+ +N +S  G  +V + +  C +
Sbjct: 871  SPQLEEVNLSGNHLEDDGCR-LVAEAASQLHIAQKLDLSDNGLSQTGVTYVLKAMSTCGT 929

Query: 389  L--LWINLYMNDI---------GDEGAEK-----------IADALKQ-NRTITTIDLGGN 425
            L  L I+L  N +           EG+ K           +   L Q +R I     G  
Sbjct: 930  LEDLHISLLNNTVVLTFAQEPREQEGSCKGRAPLISFVSPVTSELSQRSRRIRLTHCGFL 989

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
              H++      R       +  LDL+ N +G  G   L+E+L   G + +L L
Sbjct: 990  AKHTETLCEALRASCQTHNLDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNL 1042



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 105/482 (21%), Positives = 178/482 (36%), Gaps = 52/482 (10%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G  L +E  +TL     +  A S +D++    GD GL  L E L     +  +  + 
Sbjct: 1219 GFPGCSLSQEHMETLCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSH 1278

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N I+  GI      L S   ++ +++S   +  E +  +C    + AG   L+L      
Sbjct: 1279 NNISQEGILYLLETLPSYPNIQEVSVS---LSSEQIFRMCFSKKEGAGTS-LRLCECSFS 1334

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
             E    +A  L     L  L L    +D    T L   +   + +  L L   +  ++  
Sbjct: 1335 PEQVSKLASSLSQAQQLTELWLTKCHLDLPQLTMLLNLVNRPTGLLGLRLEEPWVDSVSL 1394

Query: 320  NAL------AKGLEGNKSLREL-----------HLHGNSIGDEGIR-----------ALM 351
             AL      A G     S+ E+           H  GNS     +R            LM
Sbjct: 1395 PALMEVCAQASGCLTELSISEIQRKLWLQLEFPHQEGNS-DSMALRLAHCDLETEHSHLM 1453

Query: 352  SGLSSRKGKLAVLDIG------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              L     +L  L +       N+  S+K   ++   + +C+ L    L  + +  +   
Sbjct: 1454 IQLVETYARLQQLSLSQVSFNDNDGTSSKLLQNI--LLSSCE-LKSFRLTFSQVSTKSLT 1510

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             +A  L     +  +D   N++  +    +   L+    +  L L++ P+GA     L +
Sbjct: 1511 HLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQ 1570

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
             L     +  L L   QIG  G + +A +L     +   DL  N + D       G    
Sbjct: 1571 GLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGD------VGTQCL 1624

Query: 526  HSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
             + +  L  +  ++L  N +   G +CLA     + E L   DL+ N+I D G   +A  
Sbjct: 1625 AAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPE-LRKFDLSRNQIGDVGTQCLAAI 1683

Query: 584  LK 585
            L 
Sbjct: 1684 LP 1685


>gi|320169065|gb|EFW45964.1| connexin 32 [Capsaspora owczarzaki ATCC 30864]
          Length = 587

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 39/239 (16%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           Y K  K+   +NL  +++GD  A+ IA+ALK N T+    L  N I   GA AI   LK 
Sbjct: 14  YDKVKKASGVLNLQKSEVGDAEAQAIAEALKVNTTV----LQNNQIGDAGAQAIVESLKV 69

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +T L L  N IG  GA+A++E LK +  +  L LG  QIG +GA+ + + L+ N T+
Sbjct: 70  NTTLTELGLQNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQAMTEALKVNTTL 129

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           ++L L  N + D                                 GA+ +A++ KV N  
Sbjct: 130 TVLYLDVNQIGDA--------------------------------GAQAIAEALKV-NAK 156

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 620
           +T + L+ N++ D G  AI  ALK N+   +TSL L  NFLT  G +AL +  + V ++
Sbjct: 157 VTKLYLSHNQMTDVGGQAIVGALKVNK--TLTSLELKKNFLTNTGITALNETGNTVCKL 213



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 5/186 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L  + +GD   +A+   L     K+    + NN I   GA  + E +K   +L  + L
Sbjct: 24  LNLQKSEVGDAEAQAIAEAL-----KVNTTVLQNNQIGDAGAQAIVESLKVNTTLTELGL 78

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IGD GA+ IA+ LK N T+  + LGGN I   GA A+   LK N+ +T L L  N 
Sbjct: 79  QNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQAMTEALKVNTTLTVLYLDVNQ 138

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A++E LK +  +  L L   Q+   G + +   L+ N T++ L+L+ N L + 
Sbjct: 139 IGDAGAQAIAEALKVNAKVTKLYLSHNQMTDVGGQAIVGALKVNKTLTSLELKKNFLTNT 198

Query: 515 VCSGCN 520
             +  N
Sbjct: 199 GITALN 204



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 114/223 (51%), Gaps = 7/223 (3%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L D +   +GV  LQ S V   D  A+AIAE LK N+ +    L NN I  +G  ++ 
Sbjct: 11  RKLYDKVKKASGVLNLQKSEVG--DAEAQAIAEALKVNTTV----LQNNQIGDAGAQAIV 64

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           E+L  N+T+  L L  N  G  GA A+A+ L+ N +L EL L GN IGD G +A+   L 
Sbjct: 65  ESLKVNTTLTELGLQNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQAMTEALK 124

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                L VL +  N I   GA  +AE +K    +  + L  N + D G + I  ALK N+
Sbjct: 125 VNT-TLTVLYLDVNQIGDAGAQAIAEALKVNAKVTKLYLSHNQMTDVGGQAIVGALKVNK 183

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           T+T+++L  N + + G +A+         + SLD    P  AD
Sbjct: 184 TLTSLELKKNFLTNTGITALNETGNTVCKLESLDNQRAPSPAD 226



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 9/206 (4%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S +++N+  ++L     +A   +++     GD     +AE+L  N T        N I  
Sbjct: 2   SYESMNQKQRKLYDKVKKASGVLNLQKSEVGDAEAQAIAEALKVNTTV----LQNNQIGD 57

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L+ N  L  L L  N IGD G + + + L  N  +  L L    + D GA+
Sbjct: 58  AGAQAIVESLKVNTTLTELGLQNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQ 117

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+ E LK N+ L VL L+ N I  +G  ++AEAL  N+ +  L+L+ N    +G  A+  
Sbjct: 118 AMTEALKVNTTLTVLYLDVNQIGDAGAQAIAEALKVNAKVTKLYLSHNQMTDVGGQAIVG 177

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRAL 350
            L+ NK+L  L L  N + + GI AL
Sbjct: 178 ALKVNKTLTSLELKKNFLTNTGITAL 203



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 69/145 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     GD G   +AE+L  N T  E++   N I  AG +A  
Sbjct: 61  QAIVESLKVNTTLTELGLQNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQAMT 120

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L L  N IGD G + + + L  NA V +L LS   + D G +AI   LK
Sbjct: 121 EALKVNTTLTVLYLDVNQIGDAGAQAIAEALKVNAKVTKLYLSHNQMTDVGGQAIVGALK 180

Query: 272 NNSILRVLELNNNMIDYSGFTSLAE 296
            N  L  LEL  N +  +G T+L E
Sbjct: 181 VNKTLTSLELKKNFLTNTGITALNE 205


>gi|156355002|ref|XP_001623466.1| predicted protein [Nematostella vectensis]
 gi|156210169|gb|EDO31366.1| predicted protein [Nematostella vectensis]
          Length = 378

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 178/387 (45%), Gaps = 41/387 (10%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G+  +A++L  N T  ++    + +T    +A   +L+ N  +  L+L    IG+ 
Sbjct: 1   LGDAGVASIAKALKVNTTVRKLGIEGSNMTPEAGRALGEMLRHNTTITLLSLFHGNIGNS 60

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   +   L+ N  +E++Q+ +  +   G  A+A++++N +    L+L+ N+I   G  +
Sbjct: 61  GALSIASGLLQNTTLEKIQIENSCIGPTGVSALAKVIQNAT---HLDLSRNIIGTKGAKA 117

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +++ +  +  ++ L ++      LG   +AK L  N +L EL +    I DEG+  L   
Sbjct: 118 ISKVIENSCKLKYLRIDHCNIDVLGVRDIAKALSKNTNLEELSVAYAGIDDEGMCELARS 177

Query: 354 LSSRKGKLAVLDIGNNSISAKGA----------------FHVAEYI-------------- 383
           ++  K  L VL I  N+IS  G                 FH  + I              
Sbjct: 178 VAKNK-SLQVLTITYNNISEIGKRAIIKACAESQSLNHLFHENDPILNTCLKPHSVLFKS 236

Query: 384 -KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            KN  +L  I++ +N +GD  A ++A  L  N ++  +  GG  +   G ++IA+ LK N
Sbjct: 237 LKNNSTLSTIDIGVNSLGDACASELAKVLVDNTSLNVVYFGGEYLGDAGVASIAKALKVN 296

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +  L +  + +  +  +AL E+L+ +  I  L L    IG SGA+ +A  L  N T+ 
Sbjct: 297 TTVRKLGIEGSNMTPEAGRALGEMLRHNTTITLLSLFHGNIGNSGAQGIASGLSQNTTLE 356

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAI 529
            + +      ++ C G  G+S     I
Sbjct: 357 KIQI------EDSCIGPTGVSALAKVI 377



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 5/350 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + L E  +     + + +   N G+ G   +A  L  N T E++    + I   G+ 
Sbjct: 32  EAGRALGEMLRHNTTITLLSLFHGNIGNSGALSIASGLLQNTTLEKIQIENSCIGPTGVS 91

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   V+Q+      L+LS N IG +G K +  ++ ++  ++ L++   ++   G + IA+
Sbjct: 92  ALAKVIQN---ATHLDLSRNIIGTKGAKAISKVIENSCKLKYLRIDHCNIDVLGVRDIAK 148

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L  N+ L  L +    ID  G   LA ++ +N +++ L +  N    +G  A+ K    
Sbjct: 149 ALSKNTNLEELSVAYAGIDDEGMCELARSVAKNKSLQVLTITYNNISEIGKRAIIKACAE 208

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRK--GKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           ++SL  L    + I +  ++       S K    L+ +DIG NS+    A  +A+ + + 
Sbjct: 209 SQSLNHLFHENDPILNTCLKPHSVLFKSLKNNSTLSTIDIGVNSLGDACASELAKVLVDN 268

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            SL  +      +GD G   IA ALK N T+  + + G+N+  +   A+  +L+ N+ IT
Sbjct: 269 TSLNVVYFGGEYLGDAGVASIAKALKVNTTVRKLGIEGSNMTPEAGRALGEMLRHNTTIT 328

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            L L +  IG  GA+ ++  L  +  +  +++    IG +G   +A +++
Sbjct: 329 LLSLFHGNIGNSGAQGIASGLSQNTTLEKIQIEDSCIGPTGVSALAKVIQ 378


>gi|57113991|ref|NP_001009060.1| ribonuclease inhibitor [Pan troglodytes]
 gi|397468776|ref|XP_003806047.1| PREDICTED: ribonuclease inhibitor isoform 1 [Pan paniscus]
 gi|397468778|ref|XP_003806048.1| PREDICTED: ribonuclease inhibitor isoform 2 [Pan paniscus]
 gi|397468780|ref|XP_003806049.1| PREDICTED: ribonuclease inhibitor isoform 3 [Pan paniscus]
 gi|397468782|ref|XP_003806050.1| PREDICTED: ribonuclease inhibitor isoform 4 [Pan paniscus]
 gi|397468784|ref|XP_003806051.1| PREDICTED: ribonuclease inhibitor isoform 5 [Pan paniscus]
 gi|397468786|ref|XP_003806052.1| PREDICTED: ribonuclease inhibitor isoform 6 [Pan paniscus]
 gi|397468788|ref|XP_003806053.1| PREDICTED: ribonuclease inhibitor isoform 7 [Pan paniscus]
 gi|397468790|ref|XP_003806054.1| PREDICTED: ribonuclease inhibitor isoform 8 [Pan paniscus]
 gi|38503347|sp|Q8HZP9.3|RINI_PANTR RecName: Full=Ribonuclease inhibitor; AltName:
           Full=Ribonuclease/angiogenin inhibitor 1
 gi|22901947|gb|AAN10133.1| RNase inhibitor [Pan troglodytes]
 gi|410257602|gb|JAA16768.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410257604|gb|JAA16769.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410257606|gb|JAA16770.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410257608|gb|JAA16771.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410257610|gb|JAA16772.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410305414|gb|JAA31307.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410305416|gb|JAA31308.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410305418|gb|JAA31309.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410305420|gb|JAA31310.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
          Length = 461

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 182/427 (42%), Gaps = 13/427 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSDA---RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCKPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSG 518
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D  V   
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDAGVQEL 361

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           C GL    S +     +L+ + C         LA +  + N +L  +DL+ N + D G  
Sbjct: 362 CQGLGQPGSVL----RVLWLADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGIL 416

Query: 579 AIAQALK 585
            + ++++
Sbjct: 417 QLVESVR 423



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 166/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     K +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCKPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 357 GVQELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNKFLLELQISNNRLEDAGVQELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|355751824|gb|EHH55944.1| Ribonuclease/angiogenin inhibitor 1 [Macaca fascicularis]
          Length = 456

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + + +     GD G+  + + L       +++S     +T AG     G L+S   L+
Sbjct: 52  ALTELSLRSNELGDAGVHCVLQGLQSPSCKIQKLSLQNCYLTGAGCGVLSGTLRSLPTLQ 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     + +A +L+     + L 
Sbjct: 112 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELT 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 172 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGITSNNCRDLCSIVASKASLRELALGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL      L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 232 NKLGDMGIAELCPGLLHPSSSLRTLWIWECGITAKGCADLCRVLRTKESLKELSLAGNEL 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +G  
Sbjct: 292 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLTQNKFLLELQISNNRLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L LG C +  S    +A  L  N+++  LDL  N L D
Sbjct: 352 GVQELCKGLGQPGSVLRVLWLGDCDMSDSSCSSLAATLLANHSLRELDLSNNCLGD 407



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 178/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A        L+ N AL  L+L  N +GD GV C+   L
Sbjct: 16  AELLPLLQQCQVVRLDDCGLTEARCGDISSALRVNPALTELSLRSNELGDAGVHCVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L++   L+ L L++N++  +G   L E LL+ 
Sbjct: 76  QSPSCKIQKLSLQNCYLTGAGCGVLSGTLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  I++     +   + +  SL  + L  N +GD G AE     L  + ++ T
Sbjct: 196 LEALKLESCGITSNNCRDLCSIVASKASLRELALGSNKLGDMGIAELCPGLLHPSSSLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG + + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 256 LWIWECGITAKGCADLCRVLRTKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C   A+     + +L  N  +  L +  N L D  V   C GL    S +     +L+
Sbjct: 316 KSCSFTAACCSHFSSVLTQNKFLLELQISNNRLGDAGVQELCKGLGQPGSVL----RVLW 371

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
              C         LA +  + N +L  +DL+ N + D G   + ++++
Sbjct: 372 LGDCDMSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGVLQLVESVR 418



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 109/270 (40%), Gaps = 44/270 (16%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  ++   +     GITA G  
Sbjct: 220 SKASLRELA----------LGSNKLGDMGIAELCPGLLHPSSSLRTLWIWECGITAKGCA 269

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIA 267
               VL++  +LK L+L+GN +GDEG + LC+ L++    +E L + S           +
Sbjct: 270 DLCRVLRTKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 329

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
            +L  N  L  L+++NN +  +G   L + L +  S +R L L          ++LA  L
Sbjct: 330 SVLTQNKFLLELQISNNRLGDAGVQELCKGLGQPGSVLRVLWLGDCDMSDSSCSSLAATL 389

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N SLREL                             D+ NN +   G   + E ++  
Sbjct: 390 LANHSLREL-----------------------------DLSNNCLGDAGVLQLVESVRQP 420

Query: 387 KSLLWINLYMNDI-GDEGAEKIADALKQNR 415
             LL   L + DI   E  E    AL++ +
Sbjct: 421 GCLL-EQLVLYDIYWSEAMEDRLQALEEEK 449


>gi|320167551|gb|EFW44450.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 438

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 130/261 (49%), Gaps = 41/261 (15%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSR-------KGKL-AVLDIGNNSISAKGAFHVAEYIKNC 386
           L L  N IGD   +A+   L          +G L +++ +G N I   GA  +AE +K  
Sbjct: 27  LDLRHNEIGDAEAQAIAEALKVNTETNTILQGTLRSLMILGKNRIGDAGAQAIAEALKVN 86

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           KS++ + +  N IGD GA+ IA+ LK N T+T +D+  N I   GA AI   +K N  +T
Sbjct: 87  KSVITLYVEGNQIGDAGAQAIAETLKVNTTLTVLDVSDNQIGDAGAQAIFEAIKVNPTVT 146

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            +DL  N IG   A+ ++E LK +  +  L++   QIG +GA+ +AD L+ N +++ L L
Sbjct: 147 FIDLHTNEIGDAAAQVIAEALKLNKTVAKLRMDLNQIGDAGAQAIADALKANTSLTALSL 206

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSID 566
                R+++ +                             GA  +A++ + VN+ LTS+ 
Sbjct: 207 G----RNQIGTA----------------------------GALAIAEALQ-VNKTLTSLY 233

Query: 567 LAFNEIRDDGAFAIAQALKAN 587
           L +N I + G  AI +A K +
Sbjct: 234 LQYNCIGNVGVEAIDEARKVH 254



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 123/237 (51%), Gaps = 20/237 (8%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTI---------DLGGNNIHSKGASAIARVLKD 441
           W++L  N+IGD  A+ IA+ALK N    TI          LG N I   GA AIA  LK 
Sbjct: 26  WLDLRHNEIGDAEAQAIAEALKVNTETNTILQGTLRSLMILGKNRIGDAGAQAIAEALKV 85

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  + +L +  N IG  GA+A++E LK +  +  L +   QIG +GA+ + + ++ N T+
Sbjct: 86  NKSVITLYVEGNQIGDAGAQAIAETLKVNTTLTVLDVSDNQIGDAGAQAIFEAIKVNPTV 145

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVN 559
           + +DL  N + D              A+   K +    + +N +   GA+ +A + K  N
Sbjct: 146 TFIDLHTNEIGDAAA------QVIAEALKLNKTVAKLRMDLNQIGDAGAQAIADALK-AN 198

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            +LT++ L  N+I   GA AIA+AL+ N+   +TSL L  N +   G  A+ +A+ +
Sbjct: 199 TSLTALSLGRNQIGTAGALAIAEALQVNK--TLTSLYLQYNCIGNVGVEAIDEARKV 253



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 20/264 (7%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+++ L + AKE      +D+     GD     +AE+L  N     +             
Sbjct: 9   ENQRRLYDEAKEANRSGWLDLRHNEIGDAEAQAIAEALKVNTETNTI------------- 55

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
              G L+S      + L  N IGD G + + + L  N  V  L +    + D GA+AIAE
Sbjct: 56  -LQGTLRS-----LMILGKNRIGDAGAQAIAEALKVNKSVITLYVEGNQIGDAGAQAIAE 109

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N+ L VL++++N I  +G  ++ EA+  N T+  + L+ N  G   A  +A+ L+ 
Sbjct: 110 TLKVNTTLTVLDVSDNQIGDAGAQAIFEAIKVNPTVTFIDLHTNEIGDAAAQVIAEALKL 169

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           NK++ +L +  N IGD G +A+   L +    L  L +G N I   GA  +AE ++  K+
Sbjct: 170 NKTVAKLRMDLNQIGDAGAQAIADALKANTS-LTALSLGRNQIGTAGALAIAEALQVNKT 228

Query: 389 LLWINLYMNDIGDEGAEKIADALK 412
           L  + L  N IG+ G E I +A K
Sbjct: 229 LTSLYLQYNCIGNVGVEAIDEARK 252



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 20/224 (8%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS---------LDLA 451
           +E   ++ D  K+      +DL  N I    A AIA  LK N+   +         + L 
Sbjct: 8   NENQRRLYDEAKEANRSGWLDLRHNEIGDAEAQAIAEALKVNTETNTILQGTLRSLMILG 67

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+A++E LK + ++ TL +   QIG +GA+ +A+ L+ N T+++LD+  N +
Sbjct: 68  KNRIGDAGAQAIAEALKVNKSVITLYVEGNQIGDAGAQAIAETLKVNTTLTVLDVSDNQI 127

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAF 569
            D       G      AI     + F  L  N +    A+ +A++ K +N+ +  + +  
Sbjct: 128 GDA------GAQAIFEAIKVNPTVTFIDLHTNEIGDAAAQVIAEALK-LNKTVAKLRMDL 180

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N+I D GA AIA ALKAN   ++T+L+L  N +   G  A+ +A
Sbjct: 181 NQIGDAGAQAIADALKAN--TSLTALSLGRNQIGTAGALAIAEA 222


>gi|326926192|ref|XP_003209288.1| PREDICTED: leucine-rich repeat-containing protein 34-like
           [Meleagris gallopavo]
          Length = 418

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 16/310 (5%)

Query: 222 TLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TL ++GN        + DE V+ L  +L     V  L L   DL D G + +A  L+ NS
Sbjct: 46  TLKIAGNNRLVPVQRVTDEDVQVLASVLCSAVFVTGLDLRYNDLTDVGVRHVATFLQENS 105

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            LR L L  N I  SG   +A AL  N T+  L + GN  G  G    A  L+ N +L +
Sbjct: 106 TLRYLNLMFNDIGTSGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQVNCTLEK 165

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN-----SISAKGAFHVAEYIKNCKSL 389
           L L    +G + + A+ S L+  K   AV  I  N     S   +   H+A  +KN  SL
Sbjct: 166 LDLGDCDMGTQCLIAIASVLTQNK---AVRAINLNRPLLYSQEEETTIHMALMLKNNSSL 222

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + ++L  ++I   G E++ +AL +N ++  +DL  N I  +    +  +LK N  +  LD
Sbjct: 223 VELHLCKHEIKSLGVERLCEALYENCSLRYLDLSCNKITREDVKFLGELLKQNQTLEILD 282

Query: 450 LAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           L  N I  DGA  LSE L  +   +  L +    I   G   ++  ++ N  +S + +  
Sbjct: 283 LNSNRIEDDGAIYLSEALALYNRTLKALSVVSNNISGKGLAALSQAMKINVELSYIYIWG 342

Query: 509 NGLRDEVCSG 518
           N   +  C+ 
Sbjct: 343 NNFDEAACTA 352



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 147/316 (46%), Gaps = 15/316 (4%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +D+   +  D G+  +A  L  N T   ++   N I  +G +     L SN  L  L 
Sbjct: 80  TGLDLRYNDLTDVGVRHVATFLQENSTLRYLNLMFNDIGTSGAELIANALHSNETLLHLR 139

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           ++GN IG++G      +L  N  +E+L L   D+  +   AIA +L  N  +R + LN  
Sbjct: 140 MTGNKIGNKGGMYFASMLQVNCTLEKLDLGDCDMGTQCLIAIASVLTQNKAVRAINLNRP 199

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++   +      +A  L  NS++  LHL  +   +LG   L + L  N SLR L L  N 
Sbjct: 200 LLYSQEEETTIHMALMLKNNSSLVELHLCKHEIKSLGVERLCEALYENCSLRYLDLSCNK 259

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE----YIKNCKSLLWINLYMN 397
           I  E ++  +  L  +   L +LD+ +N I   GA +++E    Y +  K+L  ++   N
Sbjct: 260 ITREDVK-FLGELLKQNQTLEILDLNSNRIEDDGAIYLSEALALYNRTLKALSVVS---N 315

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +I  +G   ++ A+K N  ++ I + GNN      +A + +++   +  +      P   
Sbjct: 316 NISGKGLAALSQAMKINVELSYIYIWGNNFDEAACTAFSELIQAGRLKPNCT-DVEPYEV 374

Query: 458 DGAKALSEV---LKFH 470
           DG   L+E+   LK H
Sbjct: 375 DGHVHLAELSHGLKKH 390



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 142/285 (49%), Gaps = 14/285 (4%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE ++ L S L S    +  LD+  N ++  G  HVA +++   +L ++NL  NDIG 
Sbjct: 61  VTDEDVQVLASVLCSAVF-VTGLDLRYNDLTDVGVRHVATFLQENSTLRYLNLMFNDIGT 119

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GAE IA+AL  N T+  + + GN I +KG    A +L+ N  +  LDL    +G     
Sbjct: 120 SGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQVNCTLEKLDLGDCDMGTQCLI 179

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAE---FVADMLRYNNTISILDLRANGLRDEVCSG 518
           A++ VL  +  +  + L    + +   E    +A ML+ N+++  L L  + ++      
Sbjct: 180 AIASVLTQNKAVRAINLNRPLLYSQEEETTIHMALMLKNNSSLVELHLCKHEIKSL---- 235

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
             G+     A+Y    + +  L  N +  +  K L +  K  N+ L  +DL  N I DDG
Sbjct: 236 --GVERLCEALYENCSLRYLDLSCNKITREDVKFLGELLK-QNQTLEILDLNSNRIEDDG 292

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           A  +++AL A  +  + +L++ +N ++  G +AL+ A  +  E+S
Sbjct: 293 AIYLSEAL-ALYNRTLKALSVVSNNISGKGLAALSQAMKINVELS 336



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 3/262 (1%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F +E      +++   + G  G   +A +L  N+T   +    N I   G   F  +LQ 
Sbjct: 100 FLQENSTLRYLNLMFNDIGTSGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQV 159

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNN 273
           N  L+ L+L    +G + +  +  +L  N  V  + L+   L    +E    +A +LKNN
Sbjct: 160 NCTLEKLDLGDCDMGTQCLIAIASVLTQNKAVRAINLNRPLLYSQEEETTIHMALMLKNN 219

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S L  L L  + I   G   L EAL EN ++R L L+ N         L + L+ N++L 
Sbjct: 220 SSLVELHLCKHEIKSLGVERLCEALYENCSLRYLDLSCNKITREDVKFLGELLKQNQTLE 279

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L+ N I D+G   L   L+     L  L + +N+IS KG   +++ +K    L +I 
Sbjct: 280 ILDLNSNRIEDDGAIYLSEALALYNRTLKALSVVSNNISGKGLAALSQAMKINVELSYIY 339

Query: 394 LYMNDIGDEGAEKIADALKQNR 415
           ++ N+  +      ++ ++  R
Sbjct: 340 IWGNNFDEAACTAFSELIQAGR 361


>gi|299115568|emb|CBN75771.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 376

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 11/272 (4%)

Query: 195 VSFAANGITAAGIKAFDGVLQS-----NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
           +S A+N I  AG+ +   +L       +  L +L+L GN IG +G + L + L  NA + 
Sbjct: 66  ISVASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRGNSIGSKGCQLLTERLRQNATLT 125

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLH 308
            L LSS  L+ EGA  I+++L +N  +  L ++N  +  +GFT++   L E N+T+R L 
Sbjct: 126 SLDLSSNPLKSEGASYISKMLLDNFTIERLVISNTDMTEAGFTAVLAVLREGNNTVRELS 185

Query: 309 LNGNYGGA---LGANALAKGLEGNK-SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           +      +   + A  +++ LE     LR L L G  IGDEG   L   L+     +  L
Sbjct: 186 IGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGIGDEGAYVLRGALTGHP-TMRTL 244

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N I   G   +A  +    SL  + L  N IGDEGA      L  ++T+TT+DL  
Sbjct: 245 DLSRNRIGITGGQALASLLVGDSSLSSLFLRANMIGDEGARAFKIVLLHSQTLTTLDLRS 304

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N+IH  G  A+A  ++ N+ +  L +  N  G
Sbjct: 305 NDIHDPGLDALAEGMECNASVERLFVWGNHFG 336



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 148/297 (49%), Gaps = 10/297 (3%)

Query: 218 IALKTLNLSGNPIGDEGV-KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN---- 272
           + L T+ L G  + DE V K +  ++     +  + ++S D+ D G  ++A LL +    
Sbjct: 32  VQLDTIRLEGLQVTDEDVEKIVGAVISSGLAIRNISVASNDIGDAGVGSLARLLDDEPPS 91

Query: 273 -NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +S+L  L+L  N I   G   L E L +N+T+ SL L+ N   + GA+ ++K L  N +
Sbjct: 92  YSSVLSSLDLRGNSIGSKGCQLLTERLRQNATLTSLDLSSNPLKSEGASYISKMLLDNFT 151

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK---GAFHVAEYIKNCKS 388
           +  L +    + + G  A+++ L      +  L IG+  + ++    A HV+  ++    
Sbjct: 152 IERLVISNTDMTEAGFTAVLAVLREGNNTVRELSIGSQLLRSREEVAACHVSRTLETPPY 211

Query: 389 LL-WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  ++L    IGDEGA  +  AL  + T+ T+DL  N I   G  A+A +L  +S ++S
Sbjct: 212 MLRLLDLSGCGIGDEGAYVLRGALTGHPTMRTLDLSRNRIGITGGQALASLLVGDSSLSS 271

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           L L  N IG +GA+A   VL     + TL L    I   G + +A+ +  N ++  L
Sbjct: 272 LFLRANMIGDEGARAFKIVLLHSQTLTTLDLRSNDIHDPGLDALAEGMECNASVERL 328



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 152/320 (47%), Gaps = 55/320 (17%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKS-----LRELHLHGNSIGDEGIRALMSGLSSRK 358
           IR++ +  N  G  G  +LA+ L+         L  L L GNSIG +G + L   L  + 
Sbjct: 63  IRNISVASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRGNSIGSKGCQLLTERLR-QN 121

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTI 417
             L  LD+ +N + ++GA ++++ + +  ++  + +   D+ + G   +   L++ N T+
Sbjct: 122 ATLTSLDLSSNPLKSEGASYISKMLLDNFTIERLVISNTDMTEAGFTAVLAVLREGNNTV 181

Query: 418 TTIDLGGNNIHSK---GASAIARVLKDNS-VITSLDLAYNPIGADGAKALSEVLKFHGNI 473
             + +G   + S+    A  ++R L+    ++  LDL+   IG +GA  L   L  H  +
Sbjct: 182 RELSIGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGIGDEGAYVLRGALTGHPTM 241

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
            TL L   +IG +G + +A +L  ++++S L LRAN + DE                   
Sbjct: 242 RTLDLSRNRIGITGGQALASLLVGDSSLSSLFLRANMIGDE------------------- 282

Query: 534 HMLFYSLCINYLQGAKCLAQSFKVV---NEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
                        GA+    +FK+V   ++ LT++DL  N+I D G  A+A+ ++ N   
Sbjct: 283 -------------GAR----AFKIVLLHSQTLTTLDLRSNDIHDPGLDALAEGMECN--A 323

Query: 591 AVTSLNLANNFLTKFGQSAL 610
           +V  L +  N    FGQ++L
Sbjct: 324 SVERLFVWGN---HFGQASL 340



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 107/264 (40%), Gaps = 36/264 (13%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E  ++    +S+D+S      EG  ++++ L  N T E +  +   +T AG  A  
Sbjct: 112 QLLTERLRQNATLTSLDLSSNPLKSEGASYISKMLLDNFTIERLVISNTDMTEAGFTAVL 171

Query: 212 GVLQSN---------------------------------IALKTLNLSGNPIGDEGVKCL 238
            VL+                                     L+ L+LSG  IGDEG   L
Sbjct: 172 AVLREGNNTVRELSIGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGIGDEGAYVL 231

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
              L  +  +  L LS   +   G +A+A LL  +S L  L L  NMI   G  +    L
Sbjct: 232 RGALTGHPTMRTLDLSRNRIGITGGQALASLLVGDSSLSSLFLRANMIGDEGARAFKIVL 291

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           L + T+ +L L  N     G +ALA+G+E N S+  L + GN  G   ++        R 
Sbjct: 292 LHSQTLTTLDLRSNDIHDPGLDALAEGMECNASVERLFVWGNHFGQASLKRFGGLGGGRF 351

Query: 359 GKLAV-LDIGNNSISAKGAFHVAE 381
             + V LD+        G +H AE
Sbjct: 352 ALVGVFLDV--QPFVVDGVYHAAE 373



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 34/122 (27%)

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKD-----NSVITSLDLAY 452
           + DE  EKI  A +     I  I +  N+I   G  ++AR+L D     +SV++SLDL  
Sbjct: 44  VTDEDVEKIVGAVISSGLAIRNISVASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRG 103

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG+ G + L+E                             LR N T++ LDL +N L+
Sbjct: 104 NSIGSKGCQLLTE----------------------------RLRQNATLTSLDLSSNPLK 135

Query: 513 DE 514
            E
Sbjct: 136 SE 137


>gi|326679710|ref|XP_001919301.3| PREDICTED: leucine-rich repeat-containing protein 34 [Danio rerio]
          Length = 421

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 159/309 (51%), Gaps = 10/309 (3%)

Query: 223 LNLSGNP-----IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           L L+GN      + D+ +  L   L  N+ ++ L L    + D+GA  IA L++++  L+
Sbjct: 48  LKLAGNDQPGARLTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQ 107

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L+L  N I+  G   +A++L +N T+++L + GN  G  GA  LA  L+ N +L E+ +
Sbjct: 108 SLDLMCNDIEADGAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDV 167

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINL 394
               +  + + A    L + K ++  +++      S+  +   H+A+ +    +L  +++
Sbjct: 168 SDCDLATQSVIAFAIVLMNNK-RICAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHM 226

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             +D+ D G E + +ALK+N ++  +DL  N I   GA  ++ VLK N  +  LDL++N 
Sbjct: 227 GKHDMTDTGVETLCEALKRNISLRYLDLCCNRITRDGAKHLSEVLKQNCSLEILDLSFNC 286

Query: 455 IGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           I   GA  LSE +K  H  +  L +   +I   G   ++  +R N++++ + +  N   +
Sbjct: 287 IEDVGAIHLSEAIKLPHSKLKALSVTSNKIRKGGLLSLSAAMRVNSSLTHIYIWGNKHEE 346

Query: 514 EVCSGCNGL 522
            VC   +GL
Sbjct: 347 PVCEAFSGL 355



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 18/313 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   +D+      D+G   +A  +  +++ + +    N I A G +     L  NI LKT
Sbjct: 77  AIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKSLHKNITLKT 136

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GN IG++G   L  +L  NA +E + +S  DL  +   A A +L NN  +  + ++
Sbjct: 137 LRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNNKRICAINVS 196

Query: 283 NNM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +   +       +A+ L+ N+T++ LH+  +     G   L + L+ N SLR L L  
Sbjct: 197 RPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVETLCEALKRNISLRYLDLCC 256

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMND 398
           N I  +G + L S +  +   L +LD+  N I   GA H++E IK   S L  +++  N 
Sbjct: 257 NRITRDGAKHL-SEVLKQNCSLEILDLSFNCIEDVGAIHLSEAIKLPHSKLKALSVTSNK 315

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA------RVLKDNSVITSLDLAY 452
           I   G   ++ A++ N ++T I + GN        A +      R+LK+++ ++      
Sbjct: 316 IRKGGLLSLSAAMRVNSSLTHIYIWGNKHEEPVCEAFSGLMSSGRLLKEHTDVS------ 369

Query: 453 NPIGADGAKALSE 465
            P   DG   L+E
Sbjct: 370 -PYEVDGHVFLAE 381



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 139/268 (51%), Gaps = 17/268 (6%)

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           + G S+ KG    LD+  N I+ KGA H+A  I++ KSL  ++L  NDI  +GAE IA +
Sbjct: 72  LEGNSAIKG----LDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKS 127

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L +N T+ T+ + GN I ++GA  +A +L+ N+ +  +D++   +      A + VL  +
Sbjct: 128 LHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNN 187

Query: 471 GNINTLKLGWCQIGASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
             I  + +    + +   E    +A ML  NNT+  L +  + + D       G+     
Sbjct: 188 KRICAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTD------TGVETLCE 241

Query: 528 AIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           A+     + +  LC N +   GAK L++  K  N +L  +DL+FN I D GA  +++A+K
Sbjct: 242 ALKRNISLRYLDLCCNRITRDGAKHLSEVLK-QNCSLEILDLSFNCIEDVGAIHLSEAIK 300

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDA 613
                 + +L++ +N + K G  +L+ A
Sbjct: 301 LPHS-KLKALSVTSNKIRKGGLLSLSAA 327



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 136/303 (44%), Gaps = 39/303 (12%)

Query: 184 ESLGYNQTAEE-VSFAANG-----ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           E LG N++++  +  A N      +T   +      L+ N A+K L+L  N I D+G   
Sbjct: 36  EVLGNNKSSDCCLKLAGNDQPGARLTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVH 95

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           +  ++ D+  ++ L L   D+  +GA+ IA+ L  N  L+ L +  N I   G   LA  
Sbjct: 96  IAHLIQDSKSLQSLDLMCNDIEADGAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATM 155

Query: 298 LLENSTIRSLH------------------LNGNYGGALGAN-------------ALAKGL 326
           L  N+T+  +                   +N     A+  +              +A+ L
Sbjct: 156 LQINATLEEVDVSDCDLATQSVIAFAIVLMNNKRICAINVSRPLLFSLQEETTVHMAQML 215

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N +L+ELH+  + + D G+  L   L  R   L  LD+  N I+  GA H++E +K  
Sbjct: 216 VVNNTLKELHMGKHDMTDTGVETLCEAL-KRNISLRYLDLCCNRITRDGAKHLSEVLKQN 274

Query: 387 KSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            SL  ++L  N I D GA  +++A+K  +  +  + +  N I   G  +++  ++ NS +
Sbjct: 275 CSLEILDLSFNCIEDVGAIHLSEAIKLPHSKLKALSVTSNKIRKGGLLSLSAAMRVNSSL 334

Query: 446 TSL 448
           T +
Sbjct: 335 THI 337



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 8/217 (3%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+    +   L+ N  I  +DL  N I  KGA  IA +++D+  + SLDL  N I AD
Sbjct: 60  LTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEAD 119

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+ +++ L  +  + TL++   +IG  GA  +A ML+ N T+  +D+    L  +    
Sbjct: 120 GAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIA 179

Query: 519 CNGLSFFHSAIYSL--KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
              +   +  I ++     L +SL     +    +AQ   VVN  L  + +  +++ D G
Sbjct: 180 FAIVLMNNKRICAINVSRPLLFSL---QEETTVHMAQML-VVNNTLKELHMGKHDMTDTG 235

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              + +ALK N  +++  L+L  N +T+ G   L++ 
Sbjct: 236 VETLCEALKRN--ISLRYLDLCCNRITRDGAKHLSEV 270


>gi|443712324|gb|ELU05701.1| hypothetical protein CAPTEDRAFT_84230, partial [Capitella teleta]
          Length = 291

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 147/278 (52%), Gaps = 9/278 (3%)

Query: 297 ALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            LLEN + ++ L +  N+ G  G   L + LE N+ L +L +  N+IGDEG R L  GL 
Sbjct: 19  GLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHLARGLR 78

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                L  L++ +  ++  G   + + +   +SL+ +++  N+I +EG + IA+AL  N 
Sbjct: 79  RHL-SLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEIDEEGCKAIAEALGSNC 137

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
           T+  + +  N + S GA+ I R L+ NS +T LD++ N I ++    L +VL+F+  +  
Sbjct: 138 TLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDISSNRITSESVLILGDVLRFNRTLRE 197

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKH 534
           L L  C++ + G   ++  L+ N T+  LDL  N + D+ V +   GL +       +  
Sbjct: 198 LNLEKCEVSSEGCAALSRALKTNTTLKNLDLSLNPIGDDGVEALAEGLKYNQ-----VMD 252

Query: 535 MLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
           +L  ++C    +G   L ++ +  N A+TS+ L +N I
Sbjct: 253 VLSLNMCDIGNRGFLVLLEAMR-FNSAMTSVKLCYNNI 289



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 1/266 (0%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
            +E+S A N I   G+      L+ N  L  L++  N IGDEG + L   L  +  +  L
Sbjct: 27  VKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHLARGLRRHLSLLSL 86

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            ++S  L   G   + + L  N  L  L++  N ID  G  ++AEAL  N T+R L +  
Sbjct: 87  NVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEIDEEGCKAIAEALGSNCTLRKLRMRA 146

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N   + GA  + + L  N  L  L +  N I  E +  L   L   +  L  L++    +
Sbjct: 147 NGVRSYGATCIFRSLRKNSRLTLLDISSNRITSESVLILGDVLRFNR-TLRELNLEKCEV 205

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S++G   ++  +K   +L  ++L +N IGD+G E +A+ LK N+ +  + L   +I ++G
Sbjct: 206 SSEGCAALSRALKTNTTLKNLDLSLNPIGDDGVEALAEGLKYNQVMDVLSLNMCDIGNRG 265

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGA 457
              +   ++ NS +TS+ L YN IG 
Sbjct: 266 FLVLLEAMRFNSAMTSVKLCYNNIGV 291



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 1/279 (0%)

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           I    G+L++   +K L+++ N IG  GV  L   L  N G+ +L +    + DEGA+ +
Sbjct: 14  IHTLAGLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHL 73

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           A  L+ +  L  L + +  +  SG + L + L  N ++  L +  N     G  A+A+ L
Sbjct: 74  ARGLRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEIDEEGCKAIAEAL 133

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N +LR+L +  N +   G   +   L  +  +L +LDI +N I+++    + + ++  
Sbjct: 134 GSNCTLRKLRMRANGVRSYGATCIFRSLR-KNSRLTLLDISSNRITSESVLILGDVLRFN 192

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           ++L  +NL   ++  EG   ++ ALK N T+  +DL  N I   G  A+A  LK N V+ 
Sbjct: 193 RTLRELNLEKCEVSSEGCAALSRALKTNTTLKNLDLSLNPIGDDGVEALAEGLKYNQVMD 252

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            L L    IG  G   L E ++F+  + ++KL +  IG 
Sbjct: 253 VLSLNMCDIGNRGFLVLLEAMRFNSAMTSVKLCYNNIGV 291



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 29/266 (10%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R    +D+     GDEG   LA  L  + +   ++  + G+T +G       L  N +L 
Sbjct: 53  RGLVKLDIRLNTIGDEGARHLARGLRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLI 112

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L++  N I +EG K + + L  N  + +L++ +  +R  GA  I   L+ NS L +L++
Sbjct: 113 QLDIGFNEIDEEGCKAIAEALGSNCTLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDI 172

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++N I       L + L  N T+R L+L      + G  AL++ L+ N +L+ L L  N 
Sbjct: 173 SSNRITSESVLILGDVLRFNRTLRELNLEKCEVSSEGCAALSRALKTNTTLKNLDLSLNP 232

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD+G+ AL  GL   +    V+D+                         ++L M DIG+
Sbjct: 233 IGDDGVEALAEGLKYNQ----VMDV-------------------------LSLNMCDIGN 263

Query: 402 EGAEKIADALKQNRTITTIDLGGNNI 427
            G   + +A++ N  +T++ L  NNI
Sbjct: 264 RGFLVLLEAMRFNSAMTSVKLCYNNI 289



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 126/249 (50%), Gaps = 5/249 (2%)

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           ++GL      +  L I  N I   G   + + ++  + L+ +++ +N IGDEGA  +A  
Sbjct: 17  LAGLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHLARG 76

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L+++ ++ ++++    +   G S + + L  N  +  LD+ +N I  +G KA++E L  +
Sbjct: 77  LRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEIDEEGCKAIAEALGSN 136

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY 530
             +  L++    + + GA  +   LR N+ +++LD+ +N +  E       +  F+  + 
Sbjct: 137 CTLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDISSNRITSESVLILGDVLRFNRTLR 196

Query: 531 SLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
            L        C    +G   L+++ K  N  L ++DL+ N I DDG  A+A+ LK N+ +
Sbjct: 197 ELN----LEKCEVSSEGCAALSRALK-TNTTLKNLDLSLNPIGDDGVEALAEGLKYNQVM 251

Query: 591 AVTSLNLAN 599
            V SLN+ +
Sbjct: 252 DVLSLNMCD 260


>gi|426366721|ref|XP_004050395.1| PREDICTED: ribonuclease inhibitor isoform 1 [Gorilla gorilla
           gorilla]
 gi|426366723|ref|XP_004050396.1| PREDICTED: ribonuclease inhibitor isoform 2 [Gorilla gorilla
           gorilla]
 gi|426366725|ref|XP_004050397.1| PREDICTED: ribonuclease inhibitor isoform 3 [Gorilla gorilla
           gorilla]
 gi|426366727|ref|XP_004050398.1| PREDICTED: ribonuclease inhibitor isoform 4 [Gorilla gorilla
           gorilla]
 gi|426366729|ref|XP_004050399.1| PREDICTED: ribonuclease inhibitor isoform 5 [Gorilla gorilla
           gorilla]
 gi|426366731|ref|XP_004050400.1| PREDICTED: ribonuclease inhibitor isoform 6 [Gorilla gorilla
           gorilla]
 gi|426366733|ref|XP_004050401.1| PREDICTED: ribonuclease inhibitor isoform 7 [Gorilla gorilla
           gorilla]
 gi|426366735|ref|XP_004050402.1| PREDICTED: ribonuclease inhibitor isoform 8 [Gorilla gorilla
           gorilla]
          Length = 461

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 183/427 (42%), Gaps = 13/427 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSD---ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L++   L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRSLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNRLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSG 518
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D  V   
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDAGVREL 361

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           C GL    S +     +L+ + C         LA +  + N +L  +DL+ N + D G  
Sbjct: 362 CQGLGQPGSVL----RVLWLADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGIL 416

Query: 579 AIAQALK 585
            + ++++
Sbjct: 417 QLVESVR 423



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 166/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L+S   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRSLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNKFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|440793894|gb|ELR15065.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 554

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 47/343 (13%)

Query: 154 LNEFAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           L+ + + LRA  S    VD+  +  G EG   + E+L  + TA  V   A+ I   G +A
Sbjct: 27  LDWYVQRLRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARA 86

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L  N +LKT+ L  N IG+E                            GAK IAE 
Sbjct: 87  VGQALLKNRSLKTVFLGCNGIGEE----------------------------GAKYIAEA 118

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           ++NN ++    L  N I  +G  ++  AL  N ++++L L  N  G  GA  L +     
Sbjct: 119 IENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSVKTLDLVQNNLGVEGARLLEEAFVDA 178

Query: 330 K---SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
               S+  L+L GN  G +G R + +G+  R   +  L +G N++  +G   +AE +K  
Sbjct: 179 AHPLSIISLYLSGNEFGVDGARHI-AGIIRRNTTIKHLYLGLNNLGEEGGLLIAEALKEN 237

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG-----------GNNIHSKGASAI 435
           K+LL + +  N++G   A   ADAL+ N T+T +DLG            N I   GA AI
Sbjct: 238 KTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDLGYAKATKALEGKPNVIEDAGAQAI 297

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           A  + +N+ +  L+L  N IG  G  A++E L+ + ++  L L
Sbjct: 298 AAAVAENTSLRVLNLTQNGIGEAGYLAVAEALRTNTSLTHLVL 340



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 16/219 (7%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           ++V     N  +++ ++L    +G EGA +I +AL+ + T  ++ LG + I  +GA A+ 
Sbjct: 29  WYVQRLRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVG 88

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + L  N  + ++ L  N IG +GAK ++E ++ +  +    L   QIG +G + +   LR
Sbjct: 89  QALLKNRSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALR 148

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-------QGAK 549
            N ++  LDL  N L      G  G      A     H L  S+   YL        GA+
Sbjct: 149 TNQSVKTLDLVQNNL------GVEGARLLEEAFVDAAHPL--SIISLYLSGNEFGVDGAR 200

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
            +A   +  N  +  + L  N + ++G   IA+ALK N+
Sbjct: 201 HIAGIIR-RNTTIKHLYLGLNNLGEEGGLLIAEALKENK 238



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 21/271 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  +V +     G+EG  ++AE++  N   E      N I   G++A    L++N ++K
Sbjct: 95  RSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSVK 154

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNA---GVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           TL+L  N +G EG + L +  VD A    +  L LS  +   +GA+ IA +++ N+ ++ 
Sbjct: 155 TLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRRNTTIKH 214

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N +   G   +AEAL EN T+ +L +  N  G   A   A  L  N +L  L L 
Sbjct: 215 LYLGLNNLGEEGGLLIAEALKENKTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDL- 273

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
                  G       L  +           N I   GA  +A  +    SL  +NL  N 
Sbjct: 274 -------GYAKATKALEGKP----------NVIEDAGAQAIAAAVAENTSLRVLNLTQNG 316

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           IG+ G   +A+AL+ N ++T + L  N + +
Sbjct: 317 IGEAGYLAVAEALRTNTSLTHLVLDRNRMPT 347



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 14/251 (5%)

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L + +  +  +D+    +  +GA  + E ++N  +   + L  ++IG EGA  +  AL +
Sbjct: 34  LRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVGQALLK 93

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NR++ T+ LG N I  +GA  IA  +++N V+    L  N IG  G +A+   L+ + ++
Sbjct: 94  NRSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSV 153

Query: 474 NTLKLGWCQIGASGAEFVAD-MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY-- 530
            TL L    +G  GA  + +  +   + +SI+ L  +G  +E   G +G       I   
Sbjct: 154 KTLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSG--NEF--GVDGARHIAGIIRRN 209

Query: 531 -SLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            ++KH+    L +N L  +G   +A++ K  N+ L ++ +  NE+    A   A AL+ N
Sbjct: 210 TTIKHLY---LGLNNLGEEGGLLIAEALK-ENKTLLTLAVLSNELGPRAAATFADALRLN 265

Query: 588 EDVAVTSLNLA 598
             +    L  A
Sbjct: 266 NTLTCLDLGYA 276


>gi|297267091|ref|XP_001116618.2| PREDICTED: ribonuclease inhibitor [Macaca mulatta]
 gi|402892320|ref|XP_003909365.1| PREDICTED: ribonuclease inhibitor isoform 1 [Papio anubis]
 gi|402892322|ref|XP_003909366.1| PREDICTED: ribonuclease inhibitor isoform 2 [Papio anubis]
 gi|355566149|gb|EHH22528.1| Ribonuclease/angiogenin inhibitor 1 [Macaca mulatta]
          Length = 456

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + + +     GD G+  + + L       +++S     +T AG     G L+S   L+
Sbjct: 52  ALTELSLRSNELGDAGVHCVLQGLQSPSCKIQKLSLQNCYLTGAGCGVLSGTLRSLPTLQ 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     + +A +L+     + L 
Sbjct: 112 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELT 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 172 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGITSNNCRDLCSIVASKASLRELALGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL      L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 232 NKLGDVGIAELCPGLLHPSSSLRTLWIWECGITAKGCADLCRVLRTKESLKELSLAGNEL 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +G  
Sbjct: 292 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLTQNKFLLELQISNNRLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L LG C +  S    +A  L  N+++  LDL  N L D
Sbjct: 352 GVQELCKGLGQPGSVLRVLWLGDCDMSDSSCSSLAATLLANHSLRELDLSNNCLGD 407



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 178/408 (43%), Gaps = 10/408 (2%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A        L+ N AL  L+L  N +GD GV C+   L
Sbjct: 16  AELLPLLQQCQVVRLDDCGLTEARCGDISSALRVNPALTELSLRSNELGDAGVHCVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L++   L+ L L++N++  +G   L E LL+ 
Sbjct: 76  QSPSCKIQKLSLQNCYLTGAGCGVLSGTLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  I++     +   + +  SL  + L  N +GD G AE     L  + ++ T
Sbjct: 196 LEALKLESCGITSNNCRDLCSIVASKASLRELALGSNKLGDVGIAELCPGLLHPSSSLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG + + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 256 LWIWECGITAKGCADLCRVLRTKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLF 537
             C   A+     + +L  N  +  L +  N L D  V   C GL    S +     +L+
Sbjct: 316 KSCSFTAACCSHFSSVLTQNKFLLELQISNNRLGDAGVQELCKGLGQPGSVL----RVLW 371

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
              C         LA +  + N +L  +DL+ N + D G   + ++++
Sbjct: 372 LGDCDMSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGVLQLVESVR 418



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 109/270 (40%), Gaps = 44/270 (16%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  ++   +     GITA G  
Sbjct: 220 SKASLRELA----------LGSNKLGDVGIAELCPGLLHPSSSLRTLWIWECGITAKGCA 269

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIA 267
               VL++  +LK L+L+GN +GDEG + LC+ L++    +E L + S           +
Sbjct: 270 DLCRVLRTKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 329

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
            +L  N  L  L+++NN +  +G   L + L +  S +R L L          ++LA  L
Sbjct: 330 SVLTQNKFLLELQISNNRLGDAGVQELCKGLGQPGSVLRVLWLGDCDMSDSSCSSLAATL 389

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N SLREL                             D+ NN +   G   + E ++  
Sbjct: 390 LANHSLREL-----------------------------DLSNNCLGDAGVLQLVESVRQP 420

Query: 387 KSLLWINLYMNDI-GDEGAEKIADALKQNR 415
             LL   L + DI   E  E    AL++ +
Sbjct: 421 GCLL-EQLVLYDIYWSEAMEDRLQALEEEK 449


>gi|426377571|ref|XP_004055536.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Gorilla gorilla gorilla]
          Length = 488

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMKESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G + L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGKHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 228 NQFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S  G  H+ 
Sbjct: 181 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFSDVGGKHLG 239

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N+    GA  + + L+ N T+T +DL  N   ++ A A+  VL+
Sbjct: 240 QMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLR 299

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD+  N IG +GA  +S+ L+ + ++  LKL    I   GA
Sbjct: 300 LNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGA 347



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 229 QFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
             A  + ++LR N+ +  LD+  N + +E                               
Sbjct: 289 EVALALGEVLRLNSCLVYLDIGGNDIGNE------------------------------- 317

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            GA  +++  +  NE+L  + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 318 -GASKISKGLE-SNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G K L  +L  N G+  L LS  +    GA 
Sbjct: 205 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|410915906|ref|XP_003971428.1| PREDICTED: ribonuclease inhibitor-like [Takifugu rubripes]
          Length = 504

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 217/474 (45%), Gaps = 22/474 (4%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSN-IALKTLN 224
           +DMS RN  D G+  L + L       E +S     ++     + D VL SN   L+ L+
Sbjct: 17  LDMSERNNQDSGVKVLWDFLKDPLCKLENISLNRCCLSKVSCDSLDSVLSSNPYHLRFLD 76

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELN 282
           LS N + D GVK L   L +    +E L L    L      ++A+ L +N S LRVL+L 
Sbjct: 77  LSENILQDSGVKQLSHFLQNPLCKLETLSLRHCRLSKLSCGSLAKALNSNPSNLRVLDLG 136

Query: 283 NNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGN 340
            N +  SG   L   LL     + +L L+         + LA  L+ N S L+ L L  N
Sbjct: 137 QNFLQNSGVKRLRSFLLNPLCKLETLSLSRCRISVNSCDFLASALKSNPSYLKVLDLSQN 196

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDI 399
            + D G+R L   L +   KL  L + +  +S      +A  +K N   L  ++L  N++
Sbjct: 197 LLQDSGVRLLSDFLLNPLCKLETLRLNDCRLSELSCRSLALVLKSNTSQLRVLDLSWNEL 256

Query: 400 GDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGA 457
            D G + +   L+  N  + T+ L    I      ++A  LK + S++  LDL+ N +  
Sbjct: 257 IDLGVKLLCSGLESPNCKLETLRLKNCYISKISCGSLAPTLKSSRSLLRELDLSGNSLMD 316

Query: 458 DGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTI-SILDLRANGLRDEV 515
            G K L   L+  + N+ +L L +C++ +   E +A +L+ N ++   L+L  N L D  
Sbjct: 317 SGVKLLCSALESPNCNLESLSLRYCRLTSVSCESLASVLKSNTSLLRELNLSENSLHD-- 374

Query: 516 CSGCNGLSFFHSAIYSLK-HMLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEI 572
               +G+    S + S   H+    L    L    C  LA   K    +L  +DL++NE+
Sbjct: 375 ----SGVKLLCSGLESPNCHLEILGLVDCRLSEFSCDWLASVLKSNPSSLRELDLSWNEL 430

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA-KDLVYEMSEKEV 625
           RD G   ++  L A+ +  + +L+L +  L++    AL  A K   Y + E ++
Sbjct: 431 RDSGVKLLSSGL-ASPNCKLETLSLTDCSLSQSSCDALASALKSNPYHLRELDL 483



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 115/245 (46%), Gaps = 7/245 (2%)

Query: 167 VDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL-KTLN 224
           +D+S     D G+  L   L   N   E +      I+     +    L+S+ +L + L+
Sbjct: 249 LDLSWNELIDLGVKLLCSGLESPNCKLETLRLKNCYISKISCGSLAPTLKSSRSLLRELD 308

Query: 225 LSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELN 282
           LSGN + D GVK LC  L   N  +E L L    L     +++A +LK+N S+LR L L+
Sbjct: 309 LSGNSLMDSGVKLLCSALESPNCNLESLSLRYCRLTSVSCESLASVLKSNTSLLRELNLS 368

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGN 340
            N +  SG   L   L   N  +  L L          + LA  L+ N S LREL L  N
Sbjct: 369 ENSLHDSGVKLLCSGLESPNCHLEILGLVDCRLSEFSCDWLASVLKSNPSSLRELDLSWN 428

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDI 399
            + D G++ L SGL+S   KL  L + + S+S      +A  +K N   L  ++L  N++
Sbjct: 429 ELRDSGVKLLSSGLASPNCKLETLSLTDCSLSQSSCDALASALKSNPYHLRELDLMWNNL 488

Query: 400 GDEGA 404
            + GA
Sbjct: 489 HESGA 493


>gi|320165382|gb|EFW42281.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 398

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L  N I D G + + + L  N  +  L L    + D GA+AIAE LK N+ L+ L L 
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLR 78

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AEAL  N+T+  L L  N  G  GA A+A+ L  NK+L+EL+L+ N I
Sbjct: 79  ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQI 138

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D G  A+   L   K  L  LD+  N I   GA  +AE +   K L W+++  N IG  
Sbjct: 139 DDAGAHAIAEALKVNK-TLEKLDLRGNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKA 197

Query: 403 GAEKIADALKQNRTITTI 420
           G + I +A + NR + T+
Sbjct: 198 GLQAIGEARQVNRILKTL 215



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L+ N     GA  +A+ L  N +L  L+L  N IGD G RA+   L      L  L++
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNT-TLKELNL 77

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
             N I A GA  +AE +K   +L  ++LY N IGD GA+ IA+AL++N+T+  + L  N 
Sbjct: 78  RENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQ 137

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I   GA AIA  LK N  +  LDL  N IG  GA+A++E L  +  +  L + +  IG +
Sbjct: 138 IDDAGAHAIAEALKVNKTLEKLDLRGNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKA 197

Query: 487 GAEFVADMLRYNNTISIL 504
           G + + +  + N  +  L
Sbjct: 198 GLQAIGEARQVNRILKTL 215



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 92/178 (51%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
              D G   +AE+L  N     ++   N I  AG +A    L+ N  LK LNL  N IG 
Sbjct: 25  QIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLRENQIGA 84

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  +  L L    + D GA+AIAE L+ N  L+ L L  N ID +G  
Sbjct: 85  AGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQIDDAGAH 144

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           ++AEAL  N T+  L L GN  G +GA A+A+ L  NK L  L +  N IG  G++A+
Sbjct: 145 AIAEALKVNKTLEKLDLRGNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKAGLQAI 202



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 110/224 (49%), Gaps = 33/224 (14%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  N I   GA  +AE ++   +L  +NL  N IGD GA  IA+ALK N T+  ++L 
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLR 78

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I + GA AIA  LK N+ +  L L  N IG  GA+A++E L+ +  +  L L   QI
Sbjct: 79  ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQI 138

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
             +GA  +A+ L+ N T+  LDLR N + D                              
Sbjct: 139 DDAGAHAIAEALKVNKTLEKLDLRGNQIGD------------------------------ 168

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
              GA+ +A++  +VN+ L  +D+ FN I   G  AI +A + N
Sbjct: 169 --IGAQAIAEAL-MVNKQLWWLDIRFNFIGKAGLQAIGEARQVN 209



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 90/175 (51%), Gaps = 1/175 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L LH N I D G + +   L      L  L++  N I   GA  +AE +K   +L  +NL
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTA-LTGLNLPQNQIGDAGARAIAEALKVNTTLKELNL 77

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IG  GA+ IA+ALK N T+  + L  N I   GA AIA  L++N  +  L L  N 
Sbjct: 78  RENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQ 137

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           I   GA A++E LK +  +  L L   QIG  GA+ +A+ L  N  +  LD+R N
Sbjct: 138 IDDAGAHAIAEALKVNKTLEKLDLRGNQIGDIGAQAIAEALMVNKQLWWLDIRFN 192



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 90/173 (52%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + +++     GD G   +AE+L  N T +E++   N I AAG +A    L+ N  L  
Sbjct: 43  ALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLRENQIGAAGAQAIAEALKVNTTLAV 102

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N IGD G + + + L +N  ++ L L    + D GA AIAE LK N  L  L+L 
Sbjct: 103 LSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQIDDAGAHAIAEALKVNKTLEKLDLR 162

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            N I   G  ++AEAL+ N  +  L +  N+ G  G  A+ +  + N+ L+ L
Sbjct: 163 GNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKAGLQAIGEARQVNRILKTL 215



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 12/132 (9%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  N+T +E+    N I  AG  A    L+ N  L+ L+L GN IGD
Sbjct: 109 QIGDAGAQAIAEALRENKTLKELYLYQNQIDDAGAHAIAEALKVNKTLEKLDLRGNQIGD 168

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNN--NM 285
            G + + + L+ N      QL  +D+R       G +AI E  + N IL+ L ++   N 
Sbjct: 169 IGAQAIAEALMVNK-----QLWWLDIRFNFIGKAGLQAIGEARQVNRILKTLLIDKQINP 223

Query: 286 IDYSGFTSLAEA 297
           + +S    LA A
Sbjct: 224 LAFSLLPRLATA 235


>gi|298712172|emb|CBJ33045.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 1998

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 200/452 (44%), Gaps = 46/452 (10%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            VD+SG     +  + +A+ L  N+T  +++ +AN + +   K      + N  LK L++S
Sbjct: 1106 VDLSGNRMRRKSGYRIADMLLLNKTITDLNLSANALDSGAAKEIFFAARKNQVLKRLDIS 1165

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            GN IG E    L  ++  N       L+ +DL D         L    I+ V        
Sbjct: 1166 GNKIGPEAASGLAGMVTKNR-----SLTYLDLSDNQMGERKFWLPTGEIMHV-------- 1212

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              S   SL +AL  N T+  L + GN  GA   +A A G+  ++SL  L L GN +   G
Sbjct: 1213 -PSAGPSLGDALRYNRTLTVLKVKGNLFGADTGHAFASGVARHRSLTWLVLSGNLLLPGG 1271

Query: 347  IRALMSGL-SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
             +AL   L ++++  L  LD+ +N +  K A   +  +K  ++L  ++L  N++G     
Sbjct: 1272 GKALALRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLKRNRTLRHLDLSRNELGTHAGI 1331

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
              A +L  NRT+ T+ + GN +    A  + + L  NS +  LDL+ N +G   A+    
Sbjct: 1332 AFATSLLVNRTLETLAIAGNGMGPNVAKNLGQSLAKNSSLKDLDLSDNVLGIATAEG--- 1388

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCSGCNGLSF 524
                 G+ + L L            +   LR N T++ ++L  N L   E+     GL+ 
Sbjct: 1389 -----GDPSDLGLA-----------LGHGLRINKTLTSINLSGNRLPTLEMQRIAEGLAD 1432

Query: 525  FHSAIYSLKHMLFYSLCIN---YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
                  SL H+      +N    L   + +AQ+       L S+DL+ + +   GA A+ 
Sbjct: 1433 HQ----SLAHLTLTGEAVNDSAALDLGRLIAQA---SGAGLVSLDLSRSALAGVGAVAVT 1485

Query: 582  QALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +AL       +  L+L++N L+K     L  A
Sbjct: 1486 RALTTGAH-GLERLDLSDNSLSKNAAGELASA 1516



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 164/376 (43%), Gaps = 55/376 (14%)

Query: 174  FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF---------DGVLQSNIALKTLN 224
             G  G   +  +LG N+T EE+  + NG+      A          +G       ++ L+
Sbjct: 1540 LGPVGGALVCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYRNGKTVRPCRMRRLD 1599

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK-AIAELLKNNSI-LRVLELN 282
            +S NP+G+E    +   LV N   + L LS  +LR + A  AI  +L+ ++I L+ L + 
Sbjct: 1600 ISRNPLGNEAGVAILGALV-NECTQHLDLSYTELRGKAAGLAIGRMLRCHTIVLQHLNVE 1658

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL-----------GANALAKGLEGNKS 331
            +N +   G   +  AL  N+++  L ++ N  GAL           G  ++   L  N++
Sbjct: 1659 HNNLGRHGVNEVFWALRRNASLLHLDISDNGAGALFGTEADKLEEYGTTSINSALSLNQT 1718

Query: 332  LRELHLHGNSIGDEGIRALMSGLSS---------------------------RKGKLAVL 364
            LR L L  N +  E    L + +                             R  ++  L
Sbjct: 1719 LRFLDLGTNGLSAECGSTLTASIRRNRCLANVSLEYNLLDDQAASTFGRKLRRDRQMDHL 1778

Query: 365  DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-----AEKIADALKQNRTITT 419
            ++ NN +  +G   +A  +     L W+++  N +G+ G       K A AL +N+T+T 
Sbjct: 1779 NLNNNRVGWRGGLDLAAGLALNSHLTWLDVGNNKLGEAGMLADVGGKFAAALVKNKTLTR 1838

Query: 420  IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
            +++ GN +   G  AIA  L  N+ +  ++L  N +  D   AL ++LK +  ++++   
Sbjct: 1839 LNMEGNTLGPSGGVAIAEALHRNNSLVEINLENNRLDQDVGFALEDLLKVNFTLHSVGAS 1898

Query: 480  WCQIGASGAEFVADML 495
              ++G    E + +ML
Sbjct: 1899 VGEVGIDSRETIDNML 1914



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 201/485 (41%), Gaps = 43/485 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFF--------------LAESLGYNQTAEEVSFAANGITAAGI 207
            R+ + +D+S    G+   +               L ++L YN+T   +    N   A   
Sbjct: 1185 RSLTYLDLSDNQMGERKFWLPTGEIMHVPSAGPSLGDALRYNRTLTVLKVKGNLFGADTG 1244

Query: 208  KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL--VDNAGVERLQLSSVDLRDEGAKA 265
             AF   +  + +L  L LSGN +   G K L   L     + + RL +S   +  + A  
Sbjct: 1245 HAFASGVARHRSLTWLVLSGNLLLPGGGKALALRLNAAKRSTLTRLDVSDNHVGKKAATL 1304

Query: 266  IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
             +  LK N  LR L+L+ N +      + A +LL N T+ +L + GN  G   A  L + 
Sbjct: 1305 FSATLKRNRTLRHLDLSRNELGTHAGIAFATSLLVNRTLETLAIAGNGMGPNVAKNLGQS 1364

Query: 326  LEGNKSLRELHLHGNSIG----------DEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            L  N SL++L L  N +G          D G+ AL  GL   K  L  +++  N +    
Sbjct: 1365 LAKNSSLKDLDLSDNVLGIATAEGGDPSDLGL-ALGHGLRINK-TLTSINLSGNRLPTLE 1422

Query: 376  AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGAS 433
               +AE + + +SL  + L    + D  A  +   + Q     + ++DL  + +   GA 
Sbjct: 1423 MQRIAEGLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASGAGLVSLDLSRSALAGVGAV 1482

Query: 434  AIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVL-------KFHGNINTLKLGWCQIGA 485
            A+ R L   +  +  LDL+ N +  + A  L+  L       +    +  L L  C +G 
Sbjct: 1483 AVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGRAGCGVRFLGLARCGLGP 1542

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSG-CNGLSFFHSAIYSLKHMLFYSLCI-- 542
             G   V   L  N T+  LD+  NGL           L   +    +++      L I  
Sbjct: 1543 VGGALVCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYRNGKTVRPCRMRRLDISR 1602

Query: 543  NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA-FAIAQALKANEDVAVTSLNLANNF 601
            N L     +A    +VNE    +DL++ E+R   A  AI + L+ +  + +  LN+ +N 
Sbjct: 1603 NPLGNEAGVAILGALVNECTQHLDLSYTELRGKAAGLAIGRMLRCHT-IVLQHLNVEHNN 1661

Query: 602  LTKFG 606
            L + G
Sbjct: 1662 LGRHG 1666



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 215/540 (39%), Gaps = 80/540 (14%)

Query: 128  MNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG 187
            + W V +G  LL G  GK        L   A +    + +D+S  + G +     + +L 
Sbjct: 1257 LTWLVLSGNLLLPG-GGKAL-----ALRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLK 1310

Query: 188  YNQTAEEVSFAANGI-TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
             N+T   +  + N + T AGI AF   L  N  L+TL ++GN +G    K L   L  N+
Sbjct: 1311 RNRTLRHLDLSRNELGTHAGI-AFATSLLVNRTLETLAIAGNGMGPNVAKNLGQSLAKNS 1369

Query: 247  GVERLQLSS----------VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
             ++ L LS            D  D G  A+   L+ N  L  + L+ N +       +AE
Sbjct: 1370 SLKDLDLSDNVLGIATAEGGDPSDLGL-ALGHGLRINKTLTSINLSGNRLPTLEMQRIAE 1428

Query: 297  ALLENSTIRSLHLNG---NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
             L ++ ++  L L G   N   AL    L     G   L  L L  +++   G  A+   
Sbjct: 1429 GLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASG-AGLVSLDLSRSALAGVGAVAVTRA 1487

Query: 354  LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK-------SLLWINLYMNDIGDEGAEK 406
            L++    L  LD+ +NS+S   A  +A  ++N +        + ++ L    +G  G   
Sbjct: 1488 LTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGRAGCGVRFLGLARCGLGPVGGAL 1547

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLK---------DNSVITSLDLAYNPIGA 457
            +  AL  NRT+  +D+  N +      A+AR L+             +  LD++ NP+G 
Sbjct: 1548 VCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYRNGKTVRPCRMRRLDISRNPLGN 1607

Query: 458  DGAKALSEVL-------------KFHGNINTLKLG---WCQ-------------IGASGA 488
            +   A+   L             +  G    L +G    C              +G  G 
Sbjct: 1608 EAGVAILGALVNECTQHLDLSYTELRGKAAGLAIGRMLRCHTIVLQHLNVEHNNLGRHGV 1667

Query: 489  EFVADMLRYNNTISILDLRANGLRDEVCSGCN-----GLSFFHSAIYSLKHMLFYSLCIN 543
              V   LR N ++  LD+  NG      +  +     G +  +SA+   + + F  L  N
Sbjct: 1668 NEVFWALRRNASLLHLDISDNGAGALFGTEADKLEEYGTTSINSALSLNQTLRFLDLGTN 1727

Query: 544  YLQGAKC---LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
             L  A+C   L  S +  N  L ++ L +N + D  A    + L+   D  +  LNL NN
Sbjct: 1728 GLS-AECGSTLTASIR-RNRCLANVSLEYNLLDDQAASTFGRKLR--RDRQMDHLNLNNN 1783



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 198/486 (40%), Gaps = 62/486 (12%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT-AAGIKAFDGVLQ-SNIA 219
            +  +S+++SG       +  +AE L  +Q+   ++     +  +A +     + Q S   
Sbjct: 1406 KTLTSINLSGNRLPTLEMQRIAEGLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASGAG 1465

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNSI--- 275
            L +L+LS + +   G   +   L   A G+ERL LS   L    A  +A  L+N+     
Sbjct: 1466 LVSLDLSRSALAGVGAVAVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGR 1525

Query: 276  ----LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE---- 327
                +R L L    +   G   +  AL  N T+  L ++ N  G +   ALA+ L     
Sbjct: 1526 AGCGVRFLGLARCGLGPVGGALVCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYR 1585

Query: 328  GNKS-----LRELHLHGNSIGDEGIRALMSGL------------SSRKGKLAVLDIG--- 367
              K+     +R L +  N +G+E   A++  L            +  +GK A L IG   
Sbjct: 1586 NGKTVRPCRMRRLDISRNPLGNEAGVAILGALVNECTQHLDLSYTELRGKAAGLAIGRML 1645

Query: 368  -------------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG-----------DEG 403
                         +N++   G   V   ++   SLL +++  N  G           + G
Sbjct: 1646 RCHTIVLQHLNVEHNNLGRHGVNEVFWALRRNASLLHLDISDNGAGALFGTEADKLEEYG 1705

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
               I  AL  N+T+  +DLG N + ++  S +   ++ N  + ++ L YN +    A   
Sbjct: 1706 TTSINSALSLNQTLRFLDLGTNGLSAECGSTLTASIRRNRCLANVSLEYNLLDDQAASTF 1765

Query: 464  SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
               L+    ++ L L   ++G  G   +A  L  N+ ++ LD+  N L +       G  
Sbjct: 1766 GRKLRRDRQMDHLNLNNNRVGWRGGLDLAAGLALNSHLTWLDVGNNKLGEAGMLADVG-G 1824

Query: 524  FFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
             F +A+   K +   ++  N L   G   +A++    N +L  I+L  N +  D  FA+ 
Sbjct: 1825 KFAAALVKNKTLTRLNMEGNTLGPSGGVAIAEALH-RNNSLVEINLENNRLDQDVGFALE 1883

Query: 582  QALKAN 587
              LK N
Sbjct: 1884 DLLKVN 1889



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 42/289 (14%)

Query: 334  ELHLHGNSIGDEGIRALMS---GLSSR--------------KGKLAVLDIGNNSISAKGA 376
            ++ L G  +GD G ++L+S    LS +              +  +  +D+  N +  K  
Sbjct: 1059 DVDLAGCGLGDRGYKSLLSICRALSVQATTFTWPSPYTTQVRINVVRVDLSGNRMRRKSG 1118

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            + +A+ +   K++  +NL  N +    A++I  A ++N+ +  +D+ GN I  + AS +A
Sbjct: 1119 YRIADMLLLNKTITDLNLSANALDSGAAKEIFFAARKNQVLKRLDISGNKIGPEAASGLA 1178

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             ++  N  +T LDL+ N +G           KF      L  G      S    + D LR
Sbjct: 1179 GMVTKNRSLTYLDLSDNQMGER---------KFW-----LPTGEIMHVPSAGPSLGDALR 1224

Query: 497  YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQS 554
            YN T+++L ++ N        G +    F S +   + + +  L  N L   G K LA  
Sbjct: 1225 YNRTLTVLKVKGN------LFGADTGHAFASGVARHRSLTWLVLSGNLLLPGGGKALALR 1278

Query: 555  FKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
                  + LT +D++ N +    A   +  LK N    +  L+L+ N L
Sbjct: 1279 LNAAKRSTLTRLDVSDNHVGKKAATLFSATLKRNR--TLRHLDLSRNEL 1325


>gi|440800728|gb|ELR21763.1| Ubiquitinconjugating enzyme subfamily protein [Acanthamoeba
            castellanii str. Neff]
          Length = 1504

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 218/485 (44%), Gaps = 54/485 (11%)

Query: 174  FGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIG 231
             G +G+  L + L  N+++   +  + +GIT+   +   +G+L S   L+ L+L GN I 
Sbjct: 698  LGLKGVRCLVKGLKNNKSSITSLDLSYSGITSECCELLAEGILAST-HLQRLSLEGNAIR 756

Query: 232  DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
              G K L  +L D+  +  L LS+ D+ D GAK +A+ L  N  L  L+L+ N + YSG 
Sbjct: 757  QTGAKELSRVLWDHECLTELNLSNCDVNDGGAKELADGLLANKRLVKLDLSRNGLGYSGL 816

Query: 292  TSLAEALLENSTIRSLHLNGNYGGALGAN------ALAKGLEGNKSLRELHLHGNSIGDE 345
             ++   L  + +I+ L+L+   G    ++      AL+K    N +L  L+    SI   
Sbjct: 817  RAVLYNLAFSPSIKELNLSRVSGSGSSSDLNELGEALSKLFRINVTLNRLNFWETSIAPA 876

Query: 346  GIRALMSGLSSRKGKLAVLDIGN-NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
               ++   L   +  L  LDI    +I++    H+   +   ++L  + L  N+I   G 
Sbjct: 877  FTASVFESLRGNRA-LRHLDISQIGTINSDQLGHLGAALTKNRTLASLLLENNNISGHGL 935

Query: 405  EKIADAL-------------------KQNRTITTID-----------------LGGNNIH 428
            E +  AL                   K+ R    +D                 L  N + 
Sbjct: 936  ETLYKALLVEKEEEKGKAVNDDERTRKEKRRDEMLDKVKEVEKEFHLNLVEFNLKNNGLG 995

Query: 429  SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            S     + +++   S +  L L +  + A   + L   L+ +  + TLKL    +G  GA
Sbjct: 996  SAAGKILGKLVTVASSLEVLTLDHCSLDAKAGETLGLALETNTRLRTLKLRHNTLGKEGA 1055

Query: 489  EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
            + +A  LR+N T+ +LDL  NG+     SG   ++   +   SL  +  +   ++ + GA
Sbjct: 1056 KALAAGLRHNKTLQVLDLSGNGIG---VSGARAIAGTLADNASLTELNLFGNLVD-VDGA 1111

Query: 549  KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
            + LA++    N+ L  +DL  N IRD GA AIAQA+ + E   +T + L  NF+   G  
Sbjct: 1112 RDLAKAL-ATNKTLVKLDLGLNRIRDKGAQAIAQAMASAEQ--LTEIGLKLNFIKDHGAL 1168

Query: 609  ALTDA 613
            A+  A
Sbjct: 1169 AVAKA 1173



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 145/322 (45%), Gaps = 10/322 (3%)

Query: 184  ESLGYNQTAEEVSFAANG-ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            ESL  N+    +  +  G I +  +      L  N  L +L L  N I   G++ L   L
Sbjct: 883  ESLRGNRALRHLDISQIGTINSDQLGHLGAALTKNRTLASLLLENNNISGHGLETLYKAL 942

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELN-------NNMIDYSGFTSL 294
            +     E+ +  + D R    K   E+L K   + +   LN       NN +  +    L
Sbjct: 943  LVEKEEEKGKAVNDDERTRKEKRRDEMLDKVKEVEKEFHLNLVEFNLKNNGLGSAAGKIL 1002

Query: 295  AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
             + +   S++  L L+     A     L   LE N  LR L L  N++G EG +AL +GL
Sbjct: 1003 GKLVTVASSLEVLTLDHCSLDAKAGETLGLALETNTRLRTLKLRHNTLGKEGAKALAAGL 1062

Query: 355  SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
               K  L VLD+  N I   GA  +A  + +  SL  +NL+ N +  +GA  +A AL  N
Sbjct: 1063 RHNK-TLQVLDLSGNGIGVSGARAIAGTLADNASLTELNLFGNLVDVDGARDLAKALATN 1121

Query: 415  RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
            +T+  +DLG N I  KGA AIA+ +     +T + L  N I   GA A+++ +     I 
Sbjct: 1122 KTLVKLDLGLNRIRDKGAQAIAQAMASAEQLTEIGLKLNFIKDHGALAVAKAVSVSPAIR 1181

Query: 475  TLKLGWCQIGASGAEFVADMLR 496
            + KL   Q+       + D+++
Sbjct: 1182 SFKLAGNQLEDETLLAINDLIK 1203



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 194/470 (41%), Gaps = 85/470 (18%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             + +++S  +  D G   LA+ L  N+   ++  + NG+  +G++A    L  + ++K L
Sbjct: 773  LTELNLSNCDVNDGGAKELADGLLANKRLVKLDLSRNGLGYSGLRAVLYNLAFSPSIKEL 832

Query: 224  NLSG----------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            NLS           N +G+     L  +   N  + RL      +      ++ E L+ N
Sbjct: 833  NLSRVSGSGSSSDLNELGE----ALSKLFRINVTLNRLNFWETSIAPAFTASVFESLRGN 888

Query: 274  SILRVLELNN-NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL------ 326
              LR L+++    I+      L  AL +N T+ SL L  N     G   L K L      
Sbjct: 889  RALRHLDISQIGTINSDQLGHLGAALTKNRTLASLLLENNNISGHGLETLYKALLVEKEE 948

Query: 327  ------------------------------EGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
                                          E + +L E +L  N +G    + ++  L +
Sbjct: 949  EKGKAVNDDERTRKEKRRDEMLDKVKEVEKEFHLNLVEFNLKNNGLGSAAGK-ILGKLVT 1007

Query: 357  RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
                L VL + + S+ AK    +   ++    L  + L  N +G EGA+ +A  L+ N+T
Sbjct: 1008 VASSLEVLTLDHCSLDAKAGETLGLALETNTRLRTLKLRHNTLGKEGAKALAAGLRHNKT 1067

Query: 417  ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
            +  +DL GN I   GA AIA  L DN+ +T L+L  N +  DGA+ L++ L  +  +  L
Sbjct: 1068 LQVLDLSGNGIGVSGARAIAGTLADNASLTELNLFGNLVDVDGARDLAKALATNKTLVKL 1127

Query: 477  KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
             LG  +I   GA+ +A  +     ++ + L+ N ++D                       
Sbjct: 1128 DLGLNRIRDKGAQAIAQAMASAEQLTEIGLKLNFIKD----------------------- 1164

Query: 537  FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
                      GA  +A++   V+ A+ S  LA N++ D+   AI   +K+
Sbjct: 1165 ---------HGALAVAKAVS-VSPAIRSFKLAGNQLEDETLLAINDLIKS 1204


>gi|440800840|gb|ELR21872.1| leucine rich repeat containing protein, partial [Acanthamoeba
           castellanii str. Neff]
          Length = 375

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 47/343 (13%)

Query: 154 LNEFAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           L+ + + LRA  S    VD+  +  G EG   + E+L  + TA  V   A+ I   G +A
Sbjct: 27  LDWYVQRLRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARA 86

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L  N +LKT+ L  N IG+E                            GAK IAE 
Sbjct: 87  VGQALLKNRSLKTVFLGCNGIGEE----------------------------GAKYIAEA 118

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           ++NN ++    L  N I  +G  ++  AL  N ++++L L  N  G  GA  L +     
Sbjct: 119 IENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSVKTLDLVQNNLGVEGARLLEEAFVDA 178

Query: 330 K---SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
               S+  L+L GN  G +G R + +G+  R   +  L +G N++  +G   +AE +K  
Sbjct: 179 AHPLSIISLYLSGNEFGVDGARHI-AGIIRRNTTIKHLYLGLNNLGEEGGLLIAEALKEN 237

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG-----------GNNIHSKGASAI 435
           K+LL + +  N++G   A   ADAL+ N T+T +DLG            N I   GA AI
Sbjct: 238 KTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDLGYAKATKALEGKPNVIEDAGAQAI 297

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           A  + +N+ +  L+L  N IG  G  A++E L+ + ++  L L
Sbjct: 298 AAAVAENTSLRVLNLTQNGIGEAGYLAVAEALRTNTSLTHLVL 340



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 16/219 (7%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           ++V     N  +++ ++L    +G EGA +I +AL+ + T  ++ LG + I  +GA A+ 
Sbjct: 29  WYVQRLRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVG 88

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + L  N  + ++ L  N IG +GAK ++E ++ +  +    L   QIG +G + +   LR
Sbjct: 89  QALLKNRSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALR 148

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-------QGAK 549
            N ++  LDL  N L      G  G      A     H L  S+   YL        GA+
Sbjct: 149 TNQSVKTLDLVQNNL------GVEGARLLEEAFVDAAHPL--SIISLYLSGNEFGVDGAR 200

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
            +A   +  N  +  + L  N + ++G   IA+ALK N+
Sbjct: 201 HIAGIIR-RNTTIKHLYLGLNNLGEEGGLLIAEALKENK 238



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 21/271 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  +V +     G+EG  ++AE++  N   E      N I   G++A    L++N ++K
Sbjct: 95  RSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSVK 154

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNA---GVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           TL+L  N +G EG + L +  VD A    +  L LS  +   +GA+ IA +++ N+ ++ 
Sbjct: 155 TLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRRNTTIKH 214

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N +   G   +AEAL EN T+ +L +  N  G   A   A  L  N +L  L L 
Sbjct: 215 LYLGLNNLGEEGGLLIAEALKENKTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDL- 273

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
                  G       L  +           N I   GA  +A  +    SL  +NL  N 
Sbjct: 274 -------GYAKATKALEGKP----------NVIEDAGAQAIAAAVAENTSLRVLNLTQNG 316

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           IG+ G   +A+AL+ N ++T + L  N + +
Sbjct: 317 IGEAGYLAVAEALRTNTSLTHLVLDRNRMPT 347



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 14/251 (5%)

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L + +  +  +D+    +  +GA  + E ++N  +   + L  ++IG EGA  +  AL +
Sbjct: 34  LRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVGQALLK 93

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NR++ T+ LG N I  +GA  IA  +++N V+    L  N IG  G +A+   L+ + ++
Sbjct: 94  NRSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSV 153

Query: 474 NTLKLGWCQIGASGAEFVAD-MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI--- 529
            TL L    +G  GA  + +  +   + +SI+ L  +G  +E   G +G       I   
Sbjct: 154 KTLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSG--NEF--GVDGARHIAGIIRRN 209

Query: 530 YSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            ++KH+    L +N L  +G   +A++ K  N+ L ++ +  NE+    A   A AL+ N
Sbjct: 210 TTIKHLY---LGLNNLGEEGGLLIAEALK-ENKTLLTLAVLSNELGPRAAATFADALRLN 265

Query: 588 EDVAVTSLNLA 598
             +    L  A
Sbjct: 266 NTLTCLDLGYA 276


>gi|348584658|ref|XP_003478089.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Cavia porcellus]
          Length = 421

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 31/284 (10%)

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           V   C +  +NA    L L    L  +GA+A+A +L +N  ++ L+L +N +  +G  +L
Sbjct: 102 VPVSCFLRQENAA--ELSLRHRGLGPQGAQALASMLTSNPYIKRLDLRDNGLCVAGAEAL 159

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A+ L +NS+I  + L+ N  GA G  AL   L  N++++++ L GN + ++  + L   L
Sbjct: 160 ADVLSKNSSISDVDLSENQFGAPGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLL 219

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
               G                             L  ++L  N + D+  E +  AL +N
Sbjct: 220 LVHTG-----------------------------LKSLDLSYNQLNDQAGETLGPALAEN 250

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
             +T +D+  N++   GA A AR L+ N  +  LD++YN  G  GA A++E LK +  + 
Sbjct: 251 TGLTELDISWNHLRGPGAIAFARGLEANIFLKVLDISYNGFGDLGALAVAEALKVNNVLE 310

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
            L +   +I A+GA  +   LR N T+ IL +  N ++ E C G
Sbjct: 311 ELNMSNNRIFAAGALSLGMDLRVNQTLRILVVSRNPMQSEGCFG 354



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 29/272 (10%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  G +G   LA  L  N   + +    NG+  AG +A   VL  N ++  ++LS N  G
Sbjct: 121 RGLGPQGAQALASMLTSNPYIKRLDLRDNGLCVAGAEALADVLSKNSSISDVDLSENQFG 180

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             GV+ LC  L  N  V++++L+   L ++ AK +A+LL  ++ L+ L+L+ N ++    
Sbjct: 181 APGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLLLVHTGLKSLDLSYNQLNDQAG 240

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            +L  AL EN+ +  L ++ N+    GA A A+GLE N  L+                  
Sbjct: 241 ETLGPALAENTGLTELDISWNHLRGPGAIAFARGLEANIFLK------------------ 282

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
                      VLDI  N     GA  VAE +K    L  +N+  N I   GA  +   L
Sbjct: 283 -----------VLDISYNGFGDLGALAVAEALKVNNVLEELNMSNNRIFAAGALSLGMDL 331

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           + N+T+  + +  N + S+G   + + ++DN+
Sbjct: 332 RVNQTLRILVVSRNPMQSEGCFGLLKSVQDNT 363



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 3/245 (1%)

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           Q N A  +L   G  +G +G + L  +L  N  ++RL L    L   GA+A+A++L  NS
Sbjct: 110 QENAAELSLRHRG--LGPQGAQALASMLTSNPYIKRLDLRDNGLCVAGAEALADVLSKNS 167

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            +  ++L+ N     G  +L  AL  N  ++ + L GN      A  LA  L  +  L+ 
Sbjct: 168 SISDVDLSENQFGAPGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLLLVHTGLKS 227

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N + D+    L   L+   G L  LDI  N +   GA   A  ++    L  +++
Sbjct: 228 LDLSYNQLNDQAGETLGPALAENTG-LTELDISWNHLRGPGAIAFARGLEANIFLKVLDI 286

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N  GD GA  +A+ALK N  +  +++  N I + GA ++   L+ N  +  L ++ NP
Sbjct: 287 SYNGFGDLGALAVAEALKVNNVLEELNMSNNRIFAAGALSLGMDLRVNQTLRILVVSRNP 346

Query: 455 IGADG 459
           + ++G
Sbjct: 347 MQSEG 351



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 1/213 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + S VD+S   FG  G+  L  +L  NQ  +++  A NG+     K    +L  +  LK+
Sbjct: 168 SISDVDLSENQFGAPGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLLLVHTGLKS 227

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D+  + L   L +N G+  L +S   LR  GA A A  L+ N  L+VL+++
Sbjct: 228 LDLSYNQLNDQAGETLGPALAENTGLTELDISWNHLRGPGAIAFARGLEANIFLKVLDIS 287

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N     G  ++AEAL  N+ +  L+++ N   A GA +L   L  N++LR L +  N +
Sbjct: 288 YNGFGDLGALAVAEALKVNNVLEELNMSNNRIFAAGALSLGMDLRVNQTLRILVVSRNPM 347

Query: 343 GDEGIRALMSGLSSRKGK-LAVLDIGNNSISAK 374
             EG   L+  +       L +LDI +  ++ K
Sbjct: 348 QSEGCFGLLKSVQDNTASALELLDISDIEVNRK 380



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 8/267 (2%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L    +G +G +AL S L+S    +  LD+ +N +   GA  +A+ +    S+  ++
Sbjct: 115 ELSLRHRGLGPQGAQALASMLTSNP-YIKRLDLRDNGLCVAGAEALADVLSKNSSISDVD 173

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N  G  G + +  AL  N+ +  + L GN +  + A  +A +L  ++ + SLDL+YN
Sbjct: 174 LSENQFGAPGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLLLVHTGLKSLDLSYN 233

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +     + L   L  +  +  L + W  +   GA   A  L  N  + +LD+  NG  D
Sbjct: 234 QLNDQAGETLGPALAENTGLTELDISWNHLRGPGAIAFARGLEANIFLKVLDISYNGFGD 293

Query: 514 EVCSGCNGLSFFHS-AIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
                   L+   +  + ++   L  S    +  GA  L    +V N+ L  + ++ N +
Sbjct: 294 -----LGALAVAEALKVNNVLEELNMSNNRIFAAGALSLGMDLRV-NQTLRILVVSRNPM 347

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLAN 599
           + +G F + ++++ N   A+  L++++
Sbjct: 348 QSEGCFGLLKSVQDNTASALELLDISD 374



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 37/260 (14%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+   A L + +  +  +GA  +A  + +   +  ++L  N +   GAE +AD L +N +
Sbjct: 109 RQENAAELSLRHRGLGPQGAQALASMLTSNPYIKRLDLRDNGLCVAGAEALADVLSKNSS 168

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I+ +DL  N   + G  A+   L  N  +  + LA N +    AK L+++L  H  + +L
Sbjct: 169 ISDVDLSENQFGAPGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLLLVHTGLKSL 228

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L + Q+     E +   L  N  ++ LD+  N LR     G   ++F       L+  +
Sbjct: 229 DLSYNQLNDQAGETLGPALAENTGLTELDISWNHLR-----GPGAIAFAR----GLEANI 279

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
           F                        L  +D+++N   D GA A+A+ALK N    +  LN
Sbjct: 280 F------------------------LKVLDISYNGFGDLGALAVAEALKVNN--VLEELN 313

Query: 597 LANNFLTKFGQSALTDAKDL 616
           ++NN +  F   AL+   DL
Sbjct: 314 MSNNRI--FAAGALSLGMDL 331


>gi|195997037|ref|XP_002108387.1| hypothetical protein TRIADDRAFT_52814 [Trichoplax adhaerens]
 gi|190589163|gb|EDV29185.1| hypothetical protein TRIADDRAFT_52814 [Trichoplax adhaerens]
          Length = 611

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 128/247 (51%), Gaps = 1/247 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L+LS   +G   +K L   LV+N    +L L    L  EGA AIA ++K N+ ++ + 
Sbjct: 123 KGLHLSHLGLGSRDIKILAQSLVENTATVKLDLQDNRLEGEGAVAIANMMKENTTIKEIN 182

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I   G  ++AE LL N+ + SL+++GN      A  L++ +  N  L+ L+L  N
Sbjct: 183 LAENRIRSEGANAVAEMLLYNTEMLSLNVSGNDFEDNDAEILSEPIMINFHLQTLNLSHN 242

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
                G + L S ++   G +  LD+  N +  KGA  +A  +++   L ++NL  N   
Sbjct: 243 KFSIIGGQFLGSAIAQNDG-IEDLDLSWNHLRKKGAHAIAIALRSNVRLKYLNLSWNGFA 301

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+GA  + + LK N T+  +DL  N I  KGA A+A  L  N  I  + +  NPI A+G 
Sbjct: 302 DDGAAIMGETLKYNNTLLELDLSNNRIGVKGAKALALGLAVNDTIRVIKIGKNPIYAEGC 361

Query: 461 KALSEVL 467
            ++ E +
Sbjct: 362 CSILEAI 368



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 15/286 (5%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFF------------LAESLGYNQTAEEVSFAANG 201
           +NE  K  +  + V    R+F D+GL              LA+SL  N    ++    N 
Sbjct: 102 INECKK--KGMTPVSHYVRHFTDKGLHLSHLGLGSRDIKILAQSLVENTATVKLDLQDNR 159

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +   G  A   +++ N  +K +NL+ N I  EG   + ++L+ N  +  L +S  D  D 
Sbjct: 160 LEGEGAVAIANMMKENTTIKEINLAENRIRSEGANAVAEMLLYNTEMLSLNVSGNDFEDN 219

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A+ ++E +  N  L+ L L++N     G   L  A+ +N  I  L L+ N+    GA+A
Sbjct: 220 DAEILSEPIMINFHLQTLNLSHNKFSIIGGQFLGSAIAQNDGIEDLDLSWNHLRKKGAHA 279

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A  L  N  L+ L+L  N   D+G  A+M         L  LD+ NN I  KGA  +A 
Sbjct: 280 IAIALRSNVRLKYLNLSWNGFADDGA-AIMGETLKYNNTLLELDLSNNRIGVKGAKALAL 338

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            +    ++  I +  N I  EG   I +A+ +N     +D+   +I
Sbjct: 339 GLAVNDTIRVIKIGKNPIYAEGCCSILEAINRNPRTVIVDIEMQDI 384



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 2/263 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   +D+       EG   +A  +  N T +E++ A N I + G  A   +L  N  + +
Sbjct: 149 ATVKLDLQDNRLEGEGAVAIANMMKENTTIKEINLAENRIRSEGANAVAEMLLYNTEMLS 208

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+SGN   D   + L + ++ N  ++ L LS       G + +   +  N  +  L+L+
Sbjct: 209 LNVSGNDFEDNDAEILSEPIMINFHLQTLNLSHNKFSIIGGQFLGSAIAQNDGIEDLDLS 268

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N +   G  ++A AL  N  ++ L+L+ N     GA  + + L+ N +L EL L  N I
Sbjct: 269 WNHLRKKGAHAIAIALRSNVRLKYLNLSWNGFADDGAAIMGETLKYNNTLLELDLSNNRI 328

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GD 401
           G +G +AL  GL+     + V+ IG N I A+G   + E I      + +++ M DI  D
Sbjct: 329 GVKGAKALALGLAV-NDTIRVIKIGKNPIYAEGCCSILEAINRNPRTVIVDIEMQDILID 387

Query: 402 EGAEKIADALKQNRTITTIDLGG 424
           +   KI + + +      I  GG
Sbjct: 388 DVCGKILEEITKKFPTIKITHGG 410



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 10/267 (3%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           LHL    +G   I+ L   L      +  LD+ +N +  +GA  +A  +K   ++  INL
Sbjct: 125 LHLSHLGLGSRDIKILAQSLVENTATVK-LDLQDNRLEGEGAVAIANMMKENTTIKEINL 183

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EGA  +A+ L  N  + ++++ GN+     A  ++  +  N  + +L+L++N 
Sbjct: 184 AENRIRSEGANAVAEMLLYNTEMLSLNVSGNDFEDNDAEILSEPIMINFHLQTLNLSHNK 243

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
               G + L   +  +  I  L L W  +   GA  +A  LR N  +  L+L  NG  D+
Sbjct: 244 FSIIGGQFLGSAIAQNDGIEDLDLSWNHLRKKGAHAIAIALRSNVRLKYLNLSWNGFADD 303

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEI 572
                 G +     +     +L   L  N +  +GAK LA     VN+ +  I +  N I
Sbjct: 304 ------GAAIMGETLKYNNTLLELDLSNNRIGVKGAKALALGL-AVNDTIRVIKIGKNPI 356

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLAN 599
             +G  +I +A+  N    +  + + +
Sbjct: 357 YAEGCCSILEAINRNPRTVIVDIEMQD 383


>gi|320167522|gb|EFW44421.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 739

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 134/285 (47%), Gaps = 17/285 (5%)

Query: 140 SGFTGKLFRESK------QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           SG+T  L RE +      Q + E  K     +++ +     GD G   + E+L  N+T  
Sbjct: 325 SGYT--LMREYRLGDAGAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLT 382

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+  + N I  AG +A    L+ N +L  L+L  N I D G + + + L+ +  +  L L
Sbjct: 383 ELLLSENQIGDAGAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFL 442

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               + + GA+AIAE L  N+ L  L L+ N I  +G  ++AEAL  N+ +  + L  N+
Sbjct: 443 RQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIGLRENH 502

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD--IGNNSI 371
            G  GA A+A  L+ N +LR L+L  N IG  G+RA+             +D  I     
Sbjct: 503 IGNAGAQAIADALKVNTTLRYLNLSQNCIGSVGVRAIDKAHKGNNTHAIRIDGQISPLVF 562

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMND-------IGDEGAEKIAD 409
           S    F  AE I+    LL   L + D       + DE AE+I D
Sbjct: 563 STLPRFATAEEIQTVFCLLTSGLELEDQLASLPALPDELAERIVD 607



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 117/260 (45%), Gaps = 29/260 (11%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           + K + A     M     GD G   +AE+L  N     +    N I  AG +A    L+ 
Sbjct: 318 YDKVMNASGYTLMREYRLGDAGAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKV 377

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L LS N IGD G + + D L  N  +  L L    + D GA+AIAE L  ++ L
Sbjct: 378 NRTLTELLLSENQIGDAGAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTL 437

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I  +G  ++AEAL +N+T+  LHL+ N  G  GA A+A+ L+ N  + E+ 
Sbjct: 438 NSLFLRQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIG 497

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IG+ G +A                             +A+ +K   +L ++NL  
Sbjct: 498 LRENHIGNAGAQA-----------------------------IADALKVNTTLRYLNLSQ 528

Query: 397 NDIGDEGAEKIADALKQNRT 416
           N IG  G   I  A K N T
Sbjct: 529 NCIGSVGVRAIDKAHKGNNT 548



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 116/239 (48%), Gaps = 35/239 (14%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K    +  + L  N IGD GA+ I +ALK NRT+T + L  N I   GA A
Sbjct: 339 GAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLTELLLSENQIGDAGAQA 398

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A  LK N+ +T L L  N I   GA+A++E L     +N+L L   QIG +GA+ +A+ 
Sbjct: 399 VADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQAIAEA 458

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L  N T++ L L  N + D                                 GA+ +A++
Sbjct: 459 LTKNTTLTELHLSTNQIGDA--------------------------------GAQAIAEA 486

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            K+ N  +T I L  N I + GA AIA ALK N    +  LNL+ N +   G  A+  A
Sbjct: 487 LKM-NAMVTEIGLRENHIGNAGAQAIADALKVN--TTLRYLNLSQNCIGSVGVRAIDKA 542



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 5/225 (2%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +GD G +A+   L    G +  L +G N I   GA  + E +K  ++L  + L  N IGD
Sbjct: 335 LGDAGAQAIAEALKVNTG-VTTLVLGENQIGDAGAQAIGEALKVNRTLTELLLSENQIGD 393

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ +ADALK N ++T + L  N+I   GA AIA  L  ++ + SL L  N IG  GA+
Sbjct: 394 AGAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQ 453

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           A++E L  +  +  L L   QIG +GA+ +A+ L+ N  ++ + LR N + +   +G   
Sbjct: 454 AIAEALTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIGLRENHIGN---AGAQA 510

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSID 566
           ++       +L+++     CI  + G + + ++ K  N     ID
Sbjct: 511 IADALKVNTTLRYLNLSQNCIGSV-GVRAIDKAHKGNNTHAIRID 554



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 184/432 (42%), Gaps = 55/432 (12%)

Query: 230 IGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           IGD G + + + L + N  +  L L    + D GA+AIAE L+  +   +  L  N I  
Sbjct: 6   IGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQIGD 65

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  +LA+AL  +ST++ L L  N  G  G  A+A+ L+ N +L  L+L  N IG  G++
Sbjct: 66  VGAQALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSVGVQ 125

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN----------- 397
           A+             LD   N + A   F      ++ +++   NL M+           
Sbjct: 126 AIEEARKVNCTSEVHLDNQINPL-AFSTFPQCATAEDTQTVF--NLLMSGQELENEFASL 182

Query: 398 -DIGDEGAEKIADA--LKQNRTITTIDLGGNN----------IHSKGASAI----ARVLK 440
             +  E AE+I D     Q    T  DL  +N            S   S+I     +VL+
Sbjct: 183 PTLPAEIAERIMDEAYYWQGVQFTKRDLFSSNHPDHFLKATVPRSINGSSIRVKAIQVLR 242

Query: 441 DNSVITSLDLAY----------------NPIGADGAKALSEVLKF-HGNINTLKLGWCQI 483
           D++  T+ DL +                 P   D    L+ +    H  I  ++ GW ++
Sbjct: 243 DSADATNGDLFHVIVRDEQGAARYECSAKPTFVDSTIELATIWPASHLIIRQMREGW-EV 301

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
               +EF  D+L+      +++     L  E   G  G      A+     +    L  N
Sbjct: 302 QVRPSEFPYDVLQREVYDKVMNASGYTLMREYRLGDAGAQAIAEALKVNTGVTTLVLGEN 361

Query: 544 YL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
            +   GA+ + ++ K VN  LT + L+ N+I D GA A+A ALK N   ++T L+L  N 
Sbjct: 362 QIGDAGAQAIGEALK-VNRTLTELLLSENQIGDAGAQAVADALKVN--TSLTELSLDQNH 418

Query: 602 LTKFGQSALTDA 613
           ++  G  A+ +A
Sbjct: 419 ISDAGAQAIAEA 430



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 2/148 (1%)

Query: 366 IGNNSISAKGAFHVAEYIKNC-KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           +G   I   GA  +AE +K    SL  ++LY N IGD GA  IA+AL+         L  
Sbjct: 1   MGMKQIGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQ 60

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N I   GA A+A  LK +S +  L L  N IG DG +A++E L+ +  +  L L    IG
Sbjct: 61  NQIGDVGAQALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIG 120

Query: 485 ASGAEFVADMLRYNNTISI-LDLRANGL 511
           + G + + +  + N T  + LD + N L
Sbjct: 121 SVGVQAIEEARKVNCTSEVHLDNQINPL 148



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N +L  L+L  N IGD G + + + L   A      L    + D GA+A+A+ LK +S +
Sbjct: 22  NTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQIGDVGAQALADALKVSSTV 81

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           + L L  N I   G  ++AEAL  N+T+  L+L  N  G++G  A+ +  + N +  E+H
Sbjct: 82  KELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSVGVQAIEEARKVNCT-SEVH 140

Query: 337 L 337
           L
Sbjct: 141 L 141



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%)

Query: 169 MSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           M  +  GD G   +AE+L   N +   +S   N I  AG +A    L+        +L  
Sbjct: 1   MGMKQIGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQ 60

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N IGD G + L D L  ++ V+ L L+   + ++G +AIAE L+ N+ L  L L +N I 
Sbjct: 61  NQIGDVGAQALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIG 120

Query: 288 YSGFTSLAEALLENSTIRSLHLN 310
             G  ++ EA   N T   +HL+
Sbjct: 121 SVGVQAIEEARKVNCT-SEVHLD 142



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)

Query: 422 LGGNNIHSKGASAIARVLKD-NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +G   I   GA  IA  LK+ N+ +T L L  N IG  GA+A++E L+         L  
Sbjct: 1   MGMKQIGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQ 60

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY---SLKHMLF 537
            QIG  GA+ +AD L+ ++T+  L L  N +      G +G+     A+    +L ++  
Sbjct: 61  NQIGDVGAQALADALKVSSTVKELLLTQNQI------GNDGVQAIAEALQMNTTLTYLNL 114

Query: 538 YSLCINYLQGAKCLAQSFKV 557
            S CI  + G + + ++ KV
Sbjct: 115 QSNCIGSV-GVQAIEEARKV 133



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 12/142 (8%)

Query: 478 LGWCQIGASGAEFVADMLR-YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
           +G  QIG +GAE +A+ L+  N +++ L L  N + D       G      A+       
Sbjct: 1   MGMKQIGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDA------GARAIAEALRLTAEAG 54

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
             SL  N +   GA+ LA + KV +  +  + L  N+I +DG  AIA+AL+ N    +T 
Sbjct: 55  MGSLYQNQIGDVGAQALADALKV-SSTVKELLLTQNQIGNDGVQAIAEALQMN--TTLTY 111

Query: 595 LNLANNFLTKFGQSALTDAKDL 616
           LNL +N +   G  A+ +A+ +
Sbjct: 112 LNLQSNCIGSVGVQAIEEARKV 133



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 5/164 (3%)

Query: 152 QTLNEFAKELR-AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           + + E  KE+  + + + +     GD G   +AE+L     A   S   N I   G +A 
Sbjct: 12  EVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQIGDVGAQAL 71

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L+ +  +K L L+ N IG++GV+ + + L  N  +  L L S  +   G +AI E  
Sbjct: 72  ADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSVGVQAIEEAR 131

Query: 271 KNNSILRVLELNN--NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           K N    V  L+N  N + +S F   A A  +  T+ +L ++G 
Sbjct: 132 KVNCTSEV-HLDNQINPLAFSTFPQCATA-EDTQTVFNLLMSGQ 173


>gi|397474932|ref|XP_003808909.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Pan paniscus]
          Length = 488

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 332 LRVLKLFLNPI 342



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T  ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 228 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 110 MNLNHHGLGPRGTKAIAIALVSNP-TVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 168

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + I +++L GN+     A+ + + L  N  I  LDL++N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 228

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NG  +
Sbjct: 229 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 288

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 289 EVA-------------LALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRV 334

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 335 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|356500208|ref|XP_003518925.1| PREDICTED: RAN GTPase-activating protein 1-like [Glycine max]
          Length = 533

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 30/288 (10%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   L+ ++ L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA++EL
Sbjct: 206 FSSALEGSV-LRYLNLSNNAMGEKGVRAFRSLLKSQTSLEELYLMNDGISEEAAKAVSEL 264

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L +   LRVL  +NNM    G  ++AE +  +  +     +    G+ G  ALA+ L   
Sbjct: 265 LPSTEKLRVLHFHNNMTGDEGAIAIAEIVKHSPALEDFRCSSTRVGSDGGVALAEALGAC 324

Query: 330 KSLRELHLHGNSIG----------------------------DEGIRALMSGLSSRKGKL 361
           K LR+L L  N  G                            D+G  AL + L      L
Sbjct: 325 KHLRKLDLRDNMFGEEAGVALSKVIPAFTDLTEIYLSYLNLEDDGAEALANALKESAPSL 384

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTI 420
            +LD+  N I+AK +  VA  I + + L  +NL  N++ DEGA  I+ AL+     +  +
Sbjct: 385 EILDLAGNDITAKASASVAACISSKQFLTKLNLSENELKDEGAVLISKALEGGHGQLIEV 444

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           DL  N+I   GA  +A  +        L++  N I  +G   L  + K
Sbjct: 445 DLSTNSITWSGAKLVAEAVVGKPGFKLLNINANFISDEGIDELKNIFK 492



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 13/288 (4%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +  LEG+  LR L+L  N++G++G+RA  S L S+   L  L + N+ IS + A  V+E
Sbjct: 206 FSSALEGS-VLRYLNLSNNAMGEKGVRAFRSLLKSQTS-LEELYLMNDGISEEAAKAVSE 263

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + + + L  ++ + N  GDEGA  IA+ +K +  +         + S G  A+A  L  
Sbjct: 264 LLPSTEKLRVLHFHNNMTGDEGAIAIAEIVKHSPALEDFRCSSTRVGSDGGVALAEALGA 323

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
              +  LDL  N  G +   ALS+V+    ++  + L +  +   GAE +A+ L+ +  +
Sbjct: 324 CKHLRKLDLRDNMFGEEAGVALSKVIPAFTDLTEIYLSYLNLEDDGAEALANALKESAPS 383

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVV 558
           + ILDL  N +  +  +         + I S + +   +L  N L  +GA  ++++ +  
Sbjct: 384 LEILDLAGNDITAKASASV------AACISSKQFLTKLNLSENELKDEGAVLISKALEGG 437

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           +  L  +DL+ N I   GA  +A+A+       +  LN+  NF++  G
Sbjct: 438 HGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKL--LNINANFISDEG 483



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 27/238 (11%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE + ++   E+   ++  + + G  A    L +   L+ L+L  N  G+E 
Sbjct: 282 GDEGAIAIAEIVKHSPALEDFRCSSTRVGSDGGVALAEALGACKHLRKLDLRDNMFGEEA 341

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
              L  ++     +  + LS ++L D+GA+A+A  LK ++                    
Sbjct: 342 GVALSKVIPAFTDLTEIYLSYLNLEDDGAEALANALKESA-------------------- 381

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
                   ++  L L GN   A  + ++A  +   + L +L+L  N + DEG   +   L
Sbjct: 382 -------PSLEILDLAGNDITAKASASVAACISSKQFLTKLNLSENELKDEGAVLISKAL 434

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
               G+L  +D+  NSI+  GA  VAE +        +N+  N I DEG +++ +  K
Sbjct: 435 EGGHGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKLLNINANFISDEGIDELKNIFK 492


>gi|345783337|ref|XP_540521.3| PREDICTED: ribonuclease inhibitor [Canis lupus familiaris]
          Length = 416

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 21/330 (6%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L       +++S     +T  G      VL+S   L+
Sbjct: 52  SLTELSLCTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCCLTKTGCGVLPAVLRSMPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+ D G++ LC+ L+D    +E+LQL   +L     +++A  L+N    + L 
Sbjct: 112 ELHLSDNPLEDAGLQLLCEGLLDPQCHLEKLQLEYCNLTAASCESLASALRNKQHFKELA 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G   L + L+E++  + +L L            L   +    SLREL L  
Sbjct: 172 VSNNEIGEAGVRVLCQGLVESACQLETLKLENCGLTPASCEDLRAVVASKTSLRELDLGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD+GI  L   L     ++ VL +    ++A G   +   +   +SL  ++L  N +
Sbjct: 232 NKLGDQGIAVLCPSLLHPSCQIRVLWLWECDVTATGCRDLCHVVSTKESLEELSLACNAL 291

Query: 400 GDEGAEKIADALKQ-------------NRTITTID-----LGGNNIHSKGASAIARVLKD 441
           GDEGA+ + ++L +             N T          LG  ++ + G +++A +L  
Sbjct: 292 GDEGAQLLCESLLEPGSRLQSLWVKSCNFTAACCHHFGTILGDCDVANDGCASLASLLLA 351

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           N  +  LDL+ N +   G + L E ++  G
Sbjct: 352 NRSLRELDLSNNRMNDQGIRRLMESVEQPG 381



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 151/352 (42%), Gaps = 21/352 (5%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  E V     G+T    K     LQ+N +L  L+L  N +GD GV   L  + 
Sbjct: 17  ELLPLIQQYEVVRLDDCGLTEVRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQ 76

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-N 301
                +++L L +  L   G   +  +L++   LR L L++N ++ +G   L E LL+  
Sbjct: 77  SPTCKIQKLSLQNCCLTKTGCGVLPAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQ 136

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  L L      A    +LA  L   +  +EL +  N IG+ G+R L  GL     +L
Sbjct: 137 CHLEKLQLEYCNLTAASCESLASALRNKQHFKELAVSNNEIGEAGVRVLCQGLVESACQL 196

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTI 420
             L + N  ++      +   + +  SL  ++L  N +GD+G   +  + L  +  I  +
Sbjct: 197 ETLKLENCGLTPASCEDLRAVVASKTSLRELDLGDNKLGDQGIAVLCPSLLHPSCQIRVL 256

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLK-- 477
            L   ++ + G   +  V+     +  L LA N +G +GA+ L E L   G+ + +L   
Sbjct: 257 WLWECDVTATGCRDLCHVVSTKESLEELSLACNALGDEGAQLLCESLLEPGSRLQSLWVK 316

Query: 478 ---------------LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                          LG C +   G   +A +L  N ++  LDL  N + D+
Sbjct: 317 SCNFTAACCHHFGTILGDCDVANDGCASLASLLLANRSLRELDLSNNRMNDQ 368



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 145/357 (40%), Gaps = 24/357 (6%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSL 307
           E ++L    L +   K I+  L+ N  L  L L  N +  +G   + + L   +  I+ L
Sbjct: 26  EVVRLDDCGLTEVRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQSPTCKIQKL 85

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L        G   L   L    +LRELHL  N + D G++ L  GL   +  L  L + 
Sbjct: 86  SLQNCCLTKTGCGVLPAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQCHLEKLQLE 145

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNN 426
             +++A     +A  ++N +    + +  N+IG+ G   +   L ++   + T+ L    
Sbjct: 146 YCNLTAASCESLASALRNKQHFKELAVSNNEIGEAGVRVLCQGLVESACQLETLKLENCG 205

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGA 485
           +       +  V+   + +  LDL  N +G  G   L   +L     I  L L  C + A
Sbjct: 206 LTPASCEDLRAVVASKTSLRELDLGDNKLGDQGIAVLCPSLLHPSCQIRVLWLWECDVTA 265

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSG----CNGLSFFHSAIYSL--KHMLFYS 539
           +G   +  ++    ++  L L  N L DE   G    C  L    S + SL  K   F +
Sbjct: 266 TGCRDLCHVVSTKESLEELSLACNALGDE---GAQLLCESLLEPGSRLQSLWVKSCNFTA 322

Query: 540 LCINYL-----------QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
            C ++             G   LA S  + N +L  +DL+ N + D G   + ++++
Sbjct: 323 ACCHHFGTILGDCDVANDGCASLA-SLLLANRSLRELDLSNNRMNDQGIRRLMESVE 378


>gi|348573181|ref|XP_003472370.1| PREDICTED: uncharacterized protein C14orf166B homolog [Cavia
           porcellus]
          Length = 556

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 28/261 (10%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+   G KA    L SN A+  L L  N I  EGV  L ++L +N  ++ L +S+ DL 
Sbjct: 139 HGLGPLGTKAIAVALVSNTAIIGLELEDNRIMKEGVLSLVEMLHENYYLQELNISTNDLG 198

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            EGAK I++ L+ N                            S++  L L+GN      A
Sbjct: 199 LEGAKIISDFLQKNI---------------------------SSLWKLKLSGNNFKEESA 231

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L + L  N  +++L L  N   D+G   L   L    G L  LD+  N    +GA  +
Sbjct: 232 ALLCQALSSNYRIKKLDLSHNEFSDKGGELLGQMLGINVG-LESLDLSWNHFHIQGAVAL 290

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
              +++  +L  +NL MN  G+EGA+ + +  + N  +T +D+  NNI + GAS ++R L
Sbjct: 291 CSGLRSNVTLKKLNLSMNGFGNEGAQALGEVFRLNSCLTHVDVSSNNISNDGASKLSRGL 350

Query: 440 KDNSVITSLDLAYNPIGADGA 460
           + N  +  L L  NPI  DGA
Sbjct: 351 ESNETLQVLKLFLNPISMDGA 371



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 35/264 (13%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E +     L  +N+
Sbjct: 134 MNLNHHGLGPLGTKAIAVALVSNTAIIG-LELEDNRIMKEGVLSLVEMLHENYYLQELNI 192

Query: 395 YMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             ND+G EGA+ I+D L++N  ++  + L GNN   + A+ + + L  N  I  LDL++N
Sbjct: 193 STNDLGLEGAKIISDFLQKNISSLWKLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHN 252

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  +   LR N T+  L+L  NG  +
Sbjct: 253 EFSDKGGELLGQMLGINVGLESLDLSWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGN 312

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           E                                GA+ L + F++ N  LT +D++ N I 
Sbjct: 313 E--------------------------------GAQALGEVFRL-NSCLTHVDVSSNNIS 339

Query: 574 DDGAFAIAQALKANEDVAVTSLNL 597
           +DGA  +++ L++NE + V  L L
Sbjct: 340 NDGASKLSRGLESNETLQVLKLFL 363



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 2/262 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++    G  G   +A +L  N     +    N I   G+ +   +L  N  L+ LN+S
Sbjct: 134 MNLNHHGLGPLGTKAIAVALVSNTAIIGLELEDNRIMKEGVLSLVEMLHENYYLQELNIS 193

Query: 227 GNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +G EG K + D L  N + + +L+LS  + ++E A  + + L +N  ++ L+L++N 
Sbjct: 194 TNDLGLEGAKIISDFLQKNISSLWKLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHNE 253

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L + L  N  + SL L+ N+    GA AL  GL  N +L++L+L  N  G+E
Sbjct: 254 FSDKGGELLGQMLGINVGLESLDLSWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGNE 313

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G +AL   +      L  +D+ +N+IS  GA  ++  +++ ++L  + L++N I  +GA 
Sbjct: 314 GAQAL-GEVFRLNSCLTHVDVSSNNISNDGASKLSRGLESNETLQVLKLFLNPISMDGAV 372

Query: 406 KIADALKQNRTITTIDLGGNNI 427
            +  A+K+N      +L  +N+
Sbjct: 373 LLILAIKRNPKSVMEELDISNV 394



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 3/230 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-ALK 221
           A   +++       EG+  L E L  N   +E++ + N +   G K     LQ NI +L 
Sbjct: 158 AIIGLELEDNRIMKEGVLSLVEMLHENYYLQELNISTNDLGLEGAKIISDFLQKNISSLW 217

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L LSGN   +E    LC  L  N  +++L LS  +  D+G + + ++L  N  L  L+L
Sbjct: 218 KLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHNEFSDKGGELLGQMLGINVGLESLDL 277

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N     G  +L   L  N T++ L+L+ N  G  GA AL +    N  L  + +  N+
Sbjct: 278 SWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGNEGAQALGEVFRLNSCLTHVDVSSNN 337

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLL 390
           I ++G   L  GL S +  L VL +  N IS  GA  +   IK N KS++
Sbjct: 338 ISNDGASKLSRGLESNE-TLQVLKLFLNPISMDGAVLLILAIKRNPKSVM 386



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 145 GTKAIAVALVSNTAIIGLELEDNRIMKEGVLSLVEMLHENYYLQELNISTNDLGLEGAKI 204

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  L+ N  SL +L L GN+  +E    L   LSS   ++  LD+ +N  S        
Sbjct: 205 ISDFLQKNISSLWKLKLSGNNFKEESAALLCQALSSNY-RIKKLDLSHNEFS-------- 255

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D+G E +   L  N  + ++DL  N+ H +GA A+   L+
Sbjct: 256 --------------------DKGGELLGQMLGINVGLESLDLSWNHFHIQGAVALCSGLR 295

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +  L+L+ N  G +GA+AL EV + +  +  + +    I   GA  ++  L  N T
Sbjct: 296 SNVTLKKLNLSMNGFGNEGAQALGEVFRLNSCLTHVDVSSNNISNDGASKLSRGLESNET 355

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 356 LQVLKLFLNPI 366



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 2/234 (0%)

Query: 143 TGKLFRESKQTLNEF-AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           T  L  E  + +++F  K + +   + +SG NF +E    L ++L  N   +++  + N 
Sbjct: 194 TNDLGLEGAKIISDFLQKNISSLWKLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHNE 253

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
            +  G +    +L  N+ L++L+LS N    +G   LC  L  N  +++L LS     +E
Sbjct: 254 FSDKGGELLGQMLGINVGLESLDLSWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGNE 313

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+A+ E+ + NS L  +++++N I   G + L+  L  N T++ L L  N     GA  
Sbjct: 314 GAQALGEVFRLNSCLTHVDVSSNNISNDGASKLSRGLESNETLQVLKLFLNPISMDGAVL 373

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           L   ++ N KS+ E     N +  E    ++ G+ +   +L VL     S+S K
Sbjct: 374 LILAIKRNPKSVMEELDISNVLVTEQFTKILDGVYAAHPQLEVLYDTVKSLSGK 427


>gi|332842671|ref|XP_001163223.2| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Pan troglodytes]
          Length = 488

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N    + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 332 LRVLKLFLNPI 342



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 228 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNPA-VTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 168

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + I +++L GN+     A+ + + L  N  I  LDL++N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 228

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NG  +
Sbjct: 229 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 288

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 289 EVA-------------LALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRV 334

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 335 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|154339185|ref|XP_001562284.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062867|emb|CAM39314.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 417

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 145/284 (51%), Gaps = 7/284 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-ALK 221
           + + + ++    G EG   +A+ L  N     +  + N + A+G +   G L++   AL+
Sbjct: 111 SLTRLGLASNRLGPEGAALVAKVLESNTYLSSLDLSVNELGASGAEYIAGALRNPASALQ 170

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G  GV  +CD +  N  ++RL L +    DE A AIA +L  N IL  L++
Sbjct: 171 VLQLHGNYLGATGVTMICDAVKTNKELKRLTLGNNHATDEAASAIAAMLNANYILEELDI 230

Query: 282 NNNMIDYSGFTSLAE-ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N +   G  ++A+  L +N+T+R L L+GN  G  GAN L   L  ++     HL  +
Sbjct: 231 RLNTLTTRGVKTIAQQGLAKNTTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLS 290

Query: 341 SIG---DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           S G     G++  ++ L S    L  +++ +N++  + A  +A+ I +  S+  ++L  N
Sbjct: 291 SCGLTSSGGVQ--IARLLSMSISLKEINLSDNALDDEAAVRLAQSIADSISISVVDLSCN 348

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +IG+EGA ++  A+ +N  +  +   GNNI       I  VL++
Sbjct: 349 EIGEEGASQLIGAVLRNAQLAALVTNGNNISRVAQKKIDNVLEE 392



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 149/327 (45%), Gaps = 31/327 (9%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LAE +  + +   +    N ++A+        +  + +L  L L+ N +G 
Sbjct: 65  DIGKEGCDGLAEVVNLSNSLHVLDIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGP 124

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGF 291
           EG   +  +L  N  +  L LS  +L   GA+ IA  L+N  S L+VL+L+ N +  +G 
Sbjct: 125 EGAALVAKVLESNTYLSSLDLSVNELGASGAEYIAGALRNPASALQVLQLHGNYLGATGV 184

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALA---------------------------- 323
           T + +A+  N  ++ L L  N+     A+A+A                            
Sbjct: 185 TMICDAVKTNKELKRLTLGNNHATDEAASAIAAMLNANYILEELDIRLNTLTTRGVKTIA 244

Query: 324 -KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS-RKGKLAVLDIGNNSISAKGAFHVAE 381
            +GL  N +LR L L GN +G  G   L   L+S ++  L  LD+ +  +++ G   +A 
Sbjct: 245 QQGLAKNTTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQIAR 304

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +    SL  INL  N + DE A ++A ++  + +I+ +DL  N I  +GAS +   +  
Sbjct: 305 LLSMSISLKEINLSDNALDDEAAVRLAQSIADSISISVVDLSCNEIGEEGASQLIGAVLR 364

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLK 468
           N+ + +L    N I     K +  VL+
Sbjct: 365 NAQLAALVTNGNNISRVAQKKIDNVLE 391



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 176/352 (50%), Gaps = 17/352 (4%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA  IA  L+++ + +VL   N+ I   G   LAE +  ++++  L + GN   A  A+ 
Sbjct: 43  GALRIASCLESSPVTKVLICYND-IGKEGCDGLAEVVNLSNSLHVLDIRGNRLSASDAHR 101

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L + +  + SL  L L  N +G EG  AL++ +      L+ LD+  N + A GA ++A 
Sbjct: 102 LLRSVSLSTSLTRLGLASNRLGPEGA-ALVAKVLESNTYLSSLDLSVNELGASGAEYIAG 160

Query: 382 YIKNCKSLLWI-NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            ++N  S L +  L+ N +G  G   I DA+K N+ +  + LG N+   + ASAIA +L 
Sbjct: 161 ALRNPASALQVLQLHGNYLGATGVTMICDAVKTNKELKRLTLGNNHATDEAASAIAAMLN 220

Query: 441 DNSVITSLDLAYNPIGADGAKALSEV-LKFHGNINTLKLGWCQIGASGAEFVADML--RY 497
            N ++  LD+  N +   G K +++  L  +  +  L L   ++G +GA  +  +L    
Sbjct: 221 ANYILEELDIRLNTLTTRGVKTIAQQGLAKNTTLRMLSLSGNEVGHAGANELTHVLASHQ 280

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSF 555
            + +  LDL + GL     SG   ++   S   SLK +   +L  N L  + A  LAQS 
Sbjct: 281 RSALGHLDLSSCGL---TSSGGVQIARLLSMSISLKEI---NLSDNALDDEAAVRLAQSI 334

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
              + +++ +DL+ NEI ++GA  +  A+  N  +A    N   N +++  Q
Sbjct: 335 -ADSISISVVDLSCNEIGEEGASQLIGAVLRNAQLAALVTN--GNNISRVAQ 383



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 160/338 (47%), Gaps = 7/338 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             +VD      G  G   +A  L  +    +V    N I   G      V+  + +L  L
Sbjct: 29  IRAVDFMDNQLGPTGALRIASCL-ESSPVTKVLICYNDIGKEGCDGLAEVVNLSNSLHVL 87

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++ GN +       L   +  +  + RL L+S  L  EGA  +A++L++N+ L  L+L+ 
Sbjct: 88  DIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGPEGAALVAKVLESNTYLSSLDLSV 147

Query: 284 NMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           N +  SG   +A AL    S ++ L L+GNY GA G   +   ++ NK L+ L L  N  
Sbjct: 148 NELGASGAEYIAGALRNPASALQVLQLHGNYLGATGVTMICDAVKTNKELKRLTLGNNHA 207

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY-IKNCKSLLWINLYMNDIGD 401
            DE   A+ + L++    L  LDI  N+++ +G   +A+  +    +L  ++L  N++G 
Sbjct: 208 TDEAASAIAAMLNANY-ILEELDIRLNTLTTRGVKTIAQQGLAKNTTLRMLSLSGNEVGH 266

Query: 402 EGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            GA ++   L   Q   +  +DL    + S G   IAR+L  +  +  ++L+ N +  + 
Sbjct: 267 AGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQIARLLSMSISLKEINLSDNALDDEA 326

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGA-EFVADMLR 496
           A  L++ +    +I+ + L   +IG  GA + +  +LR
Sbjct: 327 AVRLAQSIADSISISVVDLSCNEIGEEGASQLIGAVLR 364



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 31/308 (10%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +R +    N +G  G   + S L S    +  + I  N I  +G   +AE +    SL  
Sbjct: 29  IRAVDFMDNQLGPTGALRIASCLES--SPVTKVLICYNDIGKEGCDGLAEVVNLSNSLHV 86

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +++  N +    A ++  ++  + ++T + L  N +  +GA+ +A+VL+ N+ ++SLDL+
Sbjct: 87  LDIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGPEGAALVAKVLESNTYLSSLDLS 146

Query: 452 YNPIGADGAKALS----------EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
            N +GA GA+ ++          +VL+ HGN          +GA+G   + D ++ N  +
Sbjct: 147 VNELGASGAEYIAGALRNPASALQVLQLHGNY---------LGATGVTMICDAVKTNKEL 197

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVN 559
             L L  N   DE  S    ++   +A Y L+ +    + +N L  +G K +AQ     N
Sbjct: 198 KRLTLGNNHATDEAASA---IAAMLNANYILEEL---DIRLNTLTTRGVKTIAQQGLAKN 251

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYE 619
             L  + L+ NE+   GA  +   L +++  A+  L+L++  LT  G   +  A+ L   
Sbjct: 252 TTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLSSCGLTSSG--GVQIARLLSMS 309

Query: 620 MSEKEVNI 627
           +S KE+N+
Sbjct: 310 ISLKEINL 317



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 6/187 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSN 217
           KEL+  +   +   +  DE    +A  L  N   EE+    N +T  G+K      L  N
Sbjct: 195 KELKRLT---LGNNHATDEAASAIAAMLNANYILEELDIRLNTLTTRGVKTIAQQGLAKN 251

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             L+ L+LSGN +G  G   L  +L  +  + +  L LSS  L   G   IA LL  +  
Sbjct: 252 TTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQIARLLSMSIS 311

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ + L++N +D      LA+++ ++ +I  + L+ N  G  GA+ L   +  N  L  L
Sbjct: 312 LKEINLSDNALDDEAAVRLAQSIADSISISVVDLSCNEIGEEGASQLIGAVLRNAQLAAL 371

Query: 336 HLHGNSI 342
             +GN+I
Sbjct: 372 VTNGNNI 378


>gi|290987620|ref|XP_002676520.1| predicted protein [Naegleria gruberi]
 gi|284090123|gb|EFC43776.1| predicted protein [Naegleria gruberi]
          Length = 270

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 1/227 (0%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+   I+      L++ L  N+T  +LHL  N     G  AL + L+ N+ L+ L+L+
Sbjct: 20  LDLDEKEINNKELAQLSDLLRNNNTCYALHLKANNFDEKGLEALGEALQTNRFLKRLYLN 79

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G + L   +  R   L ++D+  + I  +GA  +   +    S+  I L  N 
Sbjct: 80  NNRIGDVGCKHLADAIK-RVTALGMIDMSMSGIGTQGAKFLGVSLVLNNSIHTIYLTDNT 138

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG EG + +A+ LK N+ +  +D+  N+I + GA A+A +LK NSV+  L +  N IG  
Sbjct: 139 IGAEGTKALAEGLKDNKKLKVLDISRNDIGNDGAVALAEMLKVNSVLEQLYIVKNNIGTT 198

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           G+ AL+E L  +  + +L + +  IG  GA     +LR N+ I  ++
Sbjct: 199 GSIALAEALVVNKGMRSLNMDFNPIGDDGATPFMKVLRENDKIEKIE 245



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 1/207 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++ +   NF ++GL  L E+L  N+  + +    N I   G K     ++   AL  +++
Sbjct: 47  ALHLKANNFDEKGLEALGEALQTNRFLKRLYLNNNRIGDVGCKHLADAIKRVTALGMIDM 106

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S + IG +G K L   LV N  +  + L+   +  EG KA+AE LK+N  L+VL+++ N 
Sbjct: 107 SMSGIGTQGAKFLGVSLVLNNSIHTIYLTDNTIGAEGTKALAEGLKDNKKLKVLDISRND 166

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G  +LAE L  NS +  L++  N  G  G+ ALA+ L  NK +R L++  N IGD+
Sbjct: 167 IGNDGAVALAEMLKVNSVLEQLYIVKNNIGTTGSIALAEALVVNKGMRSLNMDFNPIGDD 226

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSIS 372
           G    M  L     K+  ++  + SIS
Sbjct: 227 GATPFMKVLREND-KIEKIEFDDKSIS 252



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 99/194 (51%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  +  R    + ++    GD G   LA+++        +  + +GI   G K   
Sbjct: 61  EALGEALQTNRFLKRLYLNNNRIGDVGCKHLADAIKRVTALGMIDMSMSGIGTQGAKFLG 120

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N ++ T+ L+ N IG EG K L + L DN  ++ L +S  D+ ++GA A+AE+LK
Sbjct: 121 VSLVLNNSIHTIYLTDNTIGAEGTKALAEGLKDNKKLKVLDISRNDIGNDGAVALAEMLK 180

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS+L  L +  N I  +G  +LAEAL+ N  +RSL+++ N  G  GA    K L  N  
Sbjct: 181 VNSVLEQLYIVKNNIGTTGSIALAEALVVNKGMRSLNMDFNPIGDDGATPFMKVLRENDK 240

Query: 332 LRELHLHGNSIGDE 345
           + ++     SI ++
Sbjct: 241 IEKIEFDDKSISED 254



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 118/234 (50%), Gaps = 5/234 (2%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           + G+   LD+    I+ K    +++ ++N  +   ++L  N+  ++G E + +AL+ NR 
Sbjct: 13  KSGQNCDLDLDEKEINNKELAQLSDLLRNNNTCYALHLKANNFDEKGLEALGEALQTNRF 72

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  + L  N I   G   +A  +K  + +  +D++ + IG  GAK L   L  + +I+T+
Sbjct: 73  LKRLYLNNNRIGDVGCKHLADAIKRVTALGMIDMSMSGIGTQGAKFLGVSLVLNNSIHTI 132

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L    IGA G + +A+ L+ N  + +LD+  N + ++   G   L+        L+ + 
Sbjct: 133 YLTDNTIGAEGTKALAEGLKDNKKLKVLDISRNDIGND---GAVALAEMLKVNSVLEQLY 189

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
                I    G+  LA++  VVN+ + S+++ FN I DDGA    + L+ N+ +
Sbjct: 190 IVKNNIGT-TGSIALAEAL-VVNKGMRSLNMDFNPIGDDGATPFMKVLRENDKI 241



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 8/130 (6%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + L E  K+ +    +D+S  + G++G   LAE L  N   E++    N I   G  
Sbjct: 142 EGTKALAEGLKDNKKLKVLDISRNDIGNDGAVALAEMLKVNSVLEQLYIVKNNIGTTGSI 201

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N  +++LN+  NPIGD+G      +L +N  +E+++           K+I+E
Sbjct: 202 ALAEALVVNKGMRSLNMDFNPIGDDGATPFMKVLRENDKIEKIEFDD--------KSISE 253

Query: 269 LLKNNSILRV 278
             KN   +R+
Sbjct: 254 DWKNEFRMRL 263


>gi|340053885|emb|CCC48179.1| conserved hypothetical protein [Trypanosoma vivax Y486]
          Length = 433

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 30/345 (8%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           ++L L G  I   G++ + + L  N  V RL +S   + D GA A+AELL+ N  +  L 
Sbjct: 33  QSLELQGKQIVPRGMQIIGNALAKNKHVVRLDISHNKIGDAGAVAVAELLRRNETILHLN 92

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I   G  +LA A + N +      NG  G            + N++L  L L GN
Sbjct: 93  LAQNGITDVGGIALASAFIPNVSP-----NGQPG------------QWNRTLFTLVLAGN 135

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD  + AL    +  +  L+ +D+  N I   G   +   ++    L   NL  N IG
Sbjct: 136 ELGDATLLALSKAAACHR-DLSRVDLSWNKIGPLGTKCLLRSMQR-NPLCTYNLVANMIG 193

Query: 401 DEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           DEG E + +AL++  N+T+TT++L  N++  +G  A+ R++++N  I  L L  N IG  
Sbjct: 194 DEGTEHLCEALQRYGNKTLTTLNLYRNDVSYRGCKAVGRLIENNEFILDLGLHSNTIGLR 253

Query: 459 GAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYN-NTISILDLRANGLRDEVC 516
           G + L   L    N + ++ L  C +G  GA+ VA ++  +  T+  L +  N + D   
Sbjct: 254 GMQELRHHLTSAPNRLRSINLNNCMLGDDGAQEVATIIEADLPTLERLSIADNNITD--- 310

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
               G++   S +  + + L    C     GAK +  + +++  A
Sbjct: 311 --VGGMAIVKSLM--VNNFLISVSCTGNRFGAKTVELTLQLLESA 351



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 15/299 (5%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA------- 219
           +D+S    GD G   +AE L  N+T   ++ A NGIT  G  A       N++       
Sbjct: 63  LDISHNKIGDAGAVAVAELLRRNETILHLNLAQNGITDVGGIALASAFIPNVSPNGQPGQ 122

Query: 220 ----LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L TL L+GN +GD  +  L      +  + R+ LS   +   G K +   ++ N +
Sbjct: 123 WNRTLFTLVLAGNELGDATLLALSKAAACHRDLSRVDLSWNKIGPLGTKCLLRSMQRNPL 182

Query: 276 LRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
                L  NMI   G   L EAL    N T+ +L+L  N     G  A+ + +E N+ + 
Sbjct: 183 C-TYNLVANMIGDEGTEHLCEALQRYGNKTLTTLNLYRNDVSYRGCKAVGRLIENNEFIL 241

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWI 392
           +L LH N+IG  G++ L   L+S   +L  +++ N  +   GA  VA  I+ +  +L  +
Sbjct: 242 DLGLHSNTIGLRGMQELRHHLTSAPNRLRSINLNNCMLGDDGAQEVATIIEADLPTLERL 301

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++  N+I D G   I  +L  N  + ++   GN   +K      ++L+   V+  LD  
Sbjct: 302 SIADNNITDVGGMAIVKSLMVNNFLISVSCTGNRFGAKTVELTLQLLESAKVLKLLDFT 360



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 27/221 (12%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L    I   G + I +AL +N+ +  +D+  N I   GA A+A +L+ N  I  L+LA
Sbjct: 35  LELQGKQIVPRGMQIIGNALAKNKHVVRLDISHNKIGDAGAVAVAELLRRNETILHLNLA 94

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I   G  AL+    F  N++         G  G        ++N T+  L L  N L
Sbjct: 95  QNGITDVGGIALASA--FIPNVSP-------NGQPG--------QWNRTLFTLVLAGNEL 137

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAF 569
            D      +  +  H  +  +       L  N +   G KCL +S +     L + +L  
Sbjct: 138 GDATLLALSKAAACHRDLSRV------DLSWNKIGPLGTKCLLRSMQ--RNPLCTYNLVA 189

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           N I D+G   + +AL+   +  +T+LNL  N ++  G  A+
Sbjct: 190 NMIGDEGTEHLCEALQRYGNKTLTTLNLYRNDVSYRGCKAV 230



 Score = 40.0 bits (92), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 47/206 (22%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           +++L G  I  +G   I   L  N  +  LD+++N IG  GA A                
Sbjct: 34  SLELQGKQIVPRGMQIIGNALAKNKHVVRLDISHNKIGDAGAVA---------------- 77

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL------ 532
                       VA++LR N TI  L+L  NG+ D       G++   + I ++      
Sbjct: 78  ------------VAELLRRNETILHLNLAQNGITD-----VGGIALASAFIPNVSPNGQP 120

Query: 533 ----KHMLFYSLCINYLQGAKCLAQS-FKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
               + +    L  N L  A  LA S     +  L+ +DL++N+I   G   + ++++ N
Sbjct: 121 GQWNRTLFTLVLAGNELGDATLLALSKAAACHRDLSRVDLSWNKIGPLGTKCLLRSMQRN 180

Query: 588 EDVAVTSLNLANNFLTKFGQSALTDA 613
               + + NL  N +   G   L +A
Sbjct: 181 ---PLCTYNLVANMIGDEGTEHLCEA 203


>gi|387018092|gb|AFJ51164.1| Ribonuclease inhibitor-like [Crotalus adamanteus]
          Length = 455

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 16/381 (4%)

Query: 167 VDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +++S    GD G+  L + L   N   +++      +T A  +    V+ S  +L  L+L
Sbjct: 56  LNLSNNELGDAGVDALCKGLLNPNCKLQKLWLRNCNLTTACCEKLRSVV-SKSSLTELHL 114

Query: 226 SGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +G  G + LC  LVD++  +E LQL   DL  E   A+  +L   S L++L L+NN
Sbjct: 115 GDNRLGTSGGRTLCQGLVDSSCQLESLQLQFCDLTKENIDALCSVLCVKSSLQMLNLSNN 174

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +       L +AL++ S+ ++SL L          + L+  L    SL+EL +  N+IG
Sbjct: 175 KLGDEAVKHLCQALVKGSSNLQSLQLESCEITRASCDDLSTFLSSTPSLKELCIGDNNIG 234

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G+  L  G+ +   KL  L +   +ISA G   +A+ I   ++L  ++L  N + +EG
Sbjct: 235 DAGLAILCQGVQNPNSKLEKLWLWECNISAAGCEELAQIIGTKETLKEMSLLGNPVTNEG 294

Query: 404 AEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            E +   LK  +T + ++ L    + +    +I+  L  NSV+  L L  N IG +G   
Sbjct: 295 VELLCQGLKNPKTKLQSLWLRDCGLTAACCKSISSALSVNSVLKELQLGGNSIGDEGVIE 354

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           + E V   + N+ +L LG   + A   + +A ++     +  LD+  + + DE      G
Sbjct: 355 ICEGVSSPNCNLESLWLGQSSLTAVCCDALAKLIVEKPCLRELDVSYSQIGDE------G 408

Query: 522 LSFFHSAI----YSLKHMLFY 538
           +     A+     +LK+++ Y
Sbjct: 409 VLKLCEAVKNPNCNLKYLIMY 429



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 195/426 (45%), Gaps = 18/426 (4%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+  + F       L  S+  ++T   +     GI  +  +    +L +N  L  LNLS
Sbjct: 3   LDLQCQEFDTSKWKELVASMNQHKT---IRLDDCGIGISHCEDLSVLLTTNQELIELNLS 59

Query: 227 GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +GD GV  LC  L++ N  +++L L + +L     + +  ++  +S L  L L +N 
Sbjct: 60  NNELGDAGVDALCKGLLNPNCKLQKLWLRNCNLTTACCEKLRSVVSKSS-LTELHLGDNR 118

Query: 286 IDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           +  SG  +L + L+++S  + SL L          +AL   L    SL+ L+L  N +GD
Sbjct: 119 LGTSGGRTLCQGLVDSSCQLESLQLQFCDLTKENIDALCSVLCVKSSLQMLNLSNNKLGD 178

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           E ++ L   L      L  L + +  I+      ++ ++ +  SL  + +  N+IGD G 
Sbjct: 179 EAVKHLCQALVKGSSNLQSLQLESCEITRASCDDLSTFLSSTPSLKELCIGDNNIGDAGL 238

Query: 405 EKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             +   ++  N  +  + L   NI + G   +A+++     +  + L  NP+  +G + L
Sbjct: 239 AILCQGVQNPNSKLEKLWLWECNISAAGCEELAQIIGTKETLKEMSLLGNPVTNEGVELL 298

Query: 464 SEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNG 521
            + LK     + +L L  C + A+  + ++  L  N+ +  L L  N + DE V   C G
Sbjct: 299 CQGLKNPKTKLQSLWLRDCGLTAACCKSISSALSVNSVLKELQLGGNSIGDEGVIEICEG 358

Query: 522 LSFFHSAIYS--LKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
           +S  +  + S  L      ++C + L  AK       V    L  +D+++++I D+G   
Sbjct: 359 VSSPNCNLESLWLGQSSLTAVCCDAL--AK-----LIVEKPCLRELDVSYSQIGDEGVLK 411

Query: 580 IAQALK 585
           + +A+K
Sbjct: 412 LCEAVK 417



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 6/269 (2%)

Query: 150 SKQTLNEFAKELRAFSSVDM---SGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAA 205
           +K+ ++     L   SS+ M   S    GDE +  L ++L    +  + +   +  IT A
Sbjct: 149 TKENIDALCSVLCVKSSLQMLNLSNNKLGDEAVKHLCQALVKGSSNLQSLQLESCEITRA 208

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAK 264
                   L S  +LK L +  N IGD G+  LC  +   N+ +E+L L   ++   G +
Sbjct: 209 SCDDLSTFLSSTPSLKELCIGDNNIGDAGLAILCQGVQNPNSKLEKLWLWECNISAAGCE 268

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            +A+++     L+ + L  N +   G   L + L    T ++SL L      A    +++
Sbjct: 269 ELAQIIGTKETLKEMSLLGNPVTNEGVELLCQGLKNPKTKLQSLWLRDCGLTAACCKSIS 328

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  N  L+EL L GNSIGDEG+  +  G+SS    L  L +G +S++A     +A+ I
Sbjct: 329 SALSVNSVLKELQLGGNSIGDEGVIEICEGVSSPNCNLESLWLGQSSLTAVCCDALAKLI 388

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALK 412
                L  +++  + IGDEG  K+ +A+K
Sbjct: 389 VEKPCLRELDVSYSQIGDEGVLKLCEAVK 417



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 11/227 (4%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGIT 203
           ++ R S   L+ F     +   + +   N GD GL  L + +   N   E++      I+
Sbjct: 204 EITRASCDDLSTFLSSTPSLKELCIGDNNIGDAGLAILCQGVQNPNSKLEKLWLWECNIS 263

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG- 262
           AAG +    ++ +   LK ++L GNP+ +EGV+ LC  L +     + +L S+ LRD G 
Sbjct: 264 AAGCEELAQIIGTKETLKEMSLLGNPVTNEGVELLCQGLKN----PKTKLQSLWLRDCGL 319

Query: 263 ----AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGAL 317
                K+I+  L  NS+L+ L+L  N I   G   + E +   N  + SL L  +   A+
Sbjct: 320 TAACCKSISSALSVNSVLKELQLGGNSIGDEGVIEICEGVSSPNCNLESLWLGQSSLTAV 379

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             +ALAK +     LREL +  + IGDEG+  L   + +    L  L
Sbjct: 380 CCDALAKLIVEKPCLRELDVSYSQIGDEGVLKLCEAVKNPNCNLKYL 426


>gi|340054486|emb|CCC48783.1| putative leucine-rich repeat protein (LRRP) [Trypanosoma vivax
           Y486]
          Length = 460

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           + + +  ++LS N IG E  + L   L + + V    L   D+  +G  A+A ++  +  
Sbjct: 65  TEVPVTVVHLSDNQIGPEQAQKLAAAL-EASTVREALLCFNDIGKDGCDALANVVNVSVK 123

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +       L +++  ++++  L L  N  G  GA  L + LE N  L  L
Sbjct: 124 LQLLDIRGNNLTPKCVRKLLKSISMSTSLTRLGLGSNKLGEEGAALLLRALEKNTHLTSL 183

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            +  N IG  G +++   L +    L  L +  N +   G  H+   ++  +SL  + L 
Sbjct: 184 DISLNEIGPNGAKSIAQLLETPSSPLEKLQLYGNYLGCDGVVHITSALRRNRSLKELTLG 243

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D    K+A+ L+ N T++ +DL  N I + GA  +AR  L +N  + SL L+ NP
Sbjct: 244 NNNATDAAMSKVAEMLRDNITLSYLDLRLNTITASGARTLARDGLANNCFLQSLSLSGNP 303

Query: 455 IGADGAKALSEVLK-FHGNINT-LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA+ +   L    G + T L L  C++G+ G   +AD++  + TI  +DL  N L 
Sbjct: 304 IGSVGAEQIFRALTGSQGPVLTRLDLSSCELGSVGGTRIADLITSSTTIEDVDLSDNQLD 363

Query: 513 DEVC-----SGCNGLSF 524
           D+       S  NGLS 
Sbjct: 364 DDSAVALSRSLANGLSI 380



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 174/337 (51%), Gaps = 31/337 (9%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           +HL+ N  G   A  LA  LE + ++RE  L  N IG +G  AL + + +   KL +LDI
Sbjct: 72  VHLSDNQIGPEQAQKLAAALEAS-TVREALLCFNDIGKDGCDAL-ANVVNVSVKLQLLDI 129

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
             N+++ K    + + I    SL  + L  N +G+EGA  +  AL++N  +T++D+  N 
Sbjct: 130 RGNNLTPKCVRKLLKSISMSTSLTRLGLGSNKLGEEGAALLLRALEKNTHLTSLDISLNE 189

Query: 427 IHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           I   GA +IA++L+  +S +  L L  N +G DG   ++  L+ + ++  L LG      
Sbjct: 190 IGPNGAKSIAQLLETPSSPLEKLQLYGNYLGCDGVVHITSALRRNRSLKELTLGNNNATD 249

Query: 486 SGAEFVADMLRYNNTISILDLRANGL---------RDEVCSGC--NGLSFFHSAIYSL-K 533
           +    VA+MLR N T+S LDLR N +         RD + + C    LS   + I S+  
Sbjct: 250 AAMSKVAEMLRDNITLSYLDLRLNTITASGARTLARDGLANNCFLQSLSLSGNPIGSVGA 309

Query: 534 HMLFYSL------CINYLQGAKCLAQSF--KVVNEALTS------IDLAFNEIRDDGAFA 579
             +F +L       +  L  + C   S     + + +TS      +DL+ N++ DD A A
Sbjct: 310 EQIFRALTGSQGPVLTRLDLSSCELGSVGGTRIADLITSSTTIEDVDLSDNQLDDDSAVA 369

Query: 580 IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           ++++L AN  +++++LNL++N + ++  S L DA  L
Sbjct: 370 LSRSL-AN-GLSISALNLSSNKIGEWSASNLIDATQL 404



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 167/349 (47%), Gaps = 10/349 (2%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V +S    G E    LA +L  + T  E     N I   G  A   V+  ++ L+ L++ 
Sbjct: 72  VHLSDNQIGPEQAQKLAAALEAS-TVREALLCFNDIGKDGCDALANVVNVSVKLQLLDIR 130

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +  + V+ L   +  +  + RL L S  L +EGA  +   L+ N+ L  L+++ N I
Sbjct: 131 GNNLTPKCVRKLLKSISMSTSLTRLGLGSNKLGEEGAALLLRALEKNTHLTSLDISLNEI 190

Query: 287 DYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
             +G  S+A+ LLE  +S +  L L GNY G  G   +   L  N+SL+EL L  N+  D
Sbjct: 191 GPNGAKSIAQ-LLETPSSPLEKLQLYGNYLGCDGVVHITSALRRNRSLKELTLGNNNATD 249

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDE 402
             +  +   L      L+ LD+  N+I+A GA  +A      NC  L  ++L  N IG  
Sbjct: 250 AAMSKVAEMLRDNI-TLSYLDLRLNTITASGARTLARDGLANNC-FLQSLSLSGNPIGSV 307

Query: 403 GAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           GAE+I  AL   Q   +T +DL    + S G + IA ++  ++ I  +DL+ N +  D A
Sbjct: 308 GAEQIFRALTGSQGPVLTRLDLSSCELGSVGGTRIADLITSSTTIEDVDLSDNQLDDDSA 367

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            ALS  L    +I+ L L   +IG   A  + D  + N  +  L L  N
Sbjct: 368 VALSRSLANGLSISALNLSSNKIGEWSASNLIDATQLNPRVMSLILHGN 416



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 5/270 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-NIALK 221
           + + + +     G+EG   L  +L  N     +  + N I   G K+   +L++ +  L+
Sbjct: 151 SLTRLGLGSNKLGEEGAALLLRALEKNTHLTSLDISLNEIGPNGAKSIAQLLETPSSPLE 210

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G +GV  +   L  N  ++ L L + +  D     +AE+L++N  L  L+L
Sbjct: 211 KLQLYGNYLGCDGVVHITSALRRNRSLKELTLGNNNATDAAMSKVAEMLRDNITLSYLDL 270

Query: 282 NNNMIDYSGFTSLA-EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS--LRELHLH 338
             N I  SG  +LA + L  N  ++SL L+GN  G++GA  + + L G++   L  L L 
Sbjct: 271 RLNTITASGARTLARDGLANNCFLQSLSLSGNPIGSVGAEQIFRALTGSQGPVLTRLDLS 330

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
              +G  G    ++ L +    +  +D+ +N +    A  ++  + N  S+  +NL  N 
Sbjct: 331 SCELGSVG-GTRIADLITSSTTIEDVDLSDNQLDDDSAVALSRSLANGLSISALNLSSNK 389

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           IG+  A  + DA + N  + ++ L GN I+
Sbjct: 390 IGEWSASNLIDATQLNPRVMSLILHGNKIN 419



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 11/198 (5%)

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +T + L  N I  + A  +A  L+ ++V  +L L +N IG DG  AL+ V+     +  L
Sbjct: 69  VTVVHLSDNQIGPEQAQKLAAALEASTVREAL-LCFNDIGKDGCDALANVVNVSVKLQLL 127

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            +    +       +   +  + +++ L L +N L +E      G +    A+    H+ 
Sbjct: 128 DIRGNNLTPKCVRKLLKSISMSTSLTRLGLGSNKLGEE------GAALLLRALEKNTHLT 181

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
              + +N +   GAK +AQ  +  +  L  + L  N +  DG   I  AL+ N   ++  
Sbjct: 182 SLDISLNEIGPNGAKSIAQLLETPSSPLEKLQLYGNYLGCDGVVHITSALRRNR--SLKE 239

Query: 595 LNLANNFLTKFGQSALTD 612
           L L NN  T    S + +
Sbjct: 240 LTLGNNNATDAAMSKVAE 257



 Score = 42.7 bits (99), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 11/171 (6%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +T + L+ N IG + A+ L+  L+    +    L +  IG  G + +A+++  +  + +L
Sbjct: 69  VTVVHLSDNQIGPEQAQKLAAALEA-STVREALLCFNDIGKDGCDALANVVNVSVKLQLL 127

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEAL 562
           D+R N L  +       +     +I     +    L  N L  +GA  L ++ +  N  L
Sbjct: 128 DIRGNNLTPKC------VRKLLKSISMSTSLTRLGLGSNKLGEEGAALLLRALEK-NTHL 180

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           TS+D++ NEI  +GA +IAQ L+      +  L L  N+L   G   +T A
Sbjct: 181 TSLDISLNEIGPNGAKSIAQLLETPSS-PLEKLQLYGNYLGCDGVVHITSA 230


>gi|29823176|emb|CAD15503.2| probable lrr-gala family type III effector protein (gala 5)
           [Ralstonia solanacearum GMI1000]
          Length = 538

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 209/469 (44%), Gaps = 112/469 (23%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + ++G  F D+ L  L  SL     A ++S     ITAAGI        S + L  
Sbjct: 124 ALEKLTLAG-TFTDDDLRGLPASL----KALDLSRCRGSITAAGIAHL-----SRLPLVR 173

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+    IG EG +    +L ++  +  L +S+  +  EGA+A+A     N+ L  L ++
Sbjct: 174 LNVRNKRIGAEGAR----LLANHPTLTSLNVSNGRIGPEGAQALAA----NTRLTTLNVS 225

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK--------------GLEG 328
            N I  +G    A+AL  N T+RSL ++ N  G  GA  LA               G++G
Sbjct: 226 GNRIGVAG----AKALAANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDG 281

Query: 329 ------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                 +++L  L + GN IGD G+ AL +       +L  L++ +  + A G   +A  
Sbjct: 282 ATALAASRTLTSLAIGGNEIGDAGVLALAA-----NARLTTLNVESTGVGADGVKALAA- 335

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               K+L W+ L  NDIG+ GA     AL  + ++TT+ L  + I ++GA A+A     N
Sbjct: 336 ---SKTLTWLRLDGNDIGNAGAT----ALAASTSLTTLHLEHSRIGAEGAQALAA----N 384

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM-LRYNNTI 501
           + +T+LDL YN IG  G +ALS             L W  +  +  E  + + L    T+
Sbjct: 385 TKLTTLDLGYNDIGDAGVRALSA---------NATLVWLSVRRNNLEDASAVSLAAGKTL 435

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           + LD+  NG++D                                QGAK LA      N  
Sbjct: 436 TTLDISGNGIQD--------------------------------QGAKALA-----ANPT 458

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           LT++D++ N+I+       A A     +  + SL+L NN + + G  AL
Sbjct: 459 LTTLDVSSNDIK------NAGARALAANARLVSLDLRNNRMEESGTRAL 501


>gi|405954368|gb|EKC21830.1| hypothetical protein CGI_10003222 [Crassostrea gigas]
          Length = 544

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 1/221 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             SS+D+S    G  GLF++ E L  N+   +++ A N + + G +     L+ N  +  
Sbjct: 139 TVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGNDLGSRGARLISDSLRKNRTITK 198

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+SGN   +     +  ++  N  ++ L LS    R++G   + + L++NS+L+ L+L+
Sbjct: 199 LNISGNSFSERDATHMAKLISRNKALKELILSHNTFREQGGVILGKALESNSVLKTLDLS 258

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N +   G  ++  ++ EN+ + SL L+ N  G  G + + K L  N++L  L L  N +
Sbjct: 259 WNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCHEMGKSLLRNRTLTHLDLSANRV 318

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             +  R L+ G+   K  L VL +G N I+  GAF + + I
Sbjct: 319 SFDAFRQLLRGVVHNK-VLKVLKVGVNPITTDGAFAILQSI 358



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 130/251 (51%), Gaps = 8/251 (3%)

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           HG  IG  G +A+   L +    ++ LD+ +N + + G F+V E +++ K++  INL  N
Sbjct: 120 HG--IGPNGAKAVAIALVN-NSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGN 176

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           D+G  GA  I+D+L++NRTIT +++ GN+   + A+ +A+++  N  +  L L++N    
Sbjct: 177 DLGSRGARLISDSLRKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFRE 236

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            G   L + L+ +  + TL L W  +   GA  +   +  N  ++ LDL  NG   E C 
Sbjct: 237 QGGVILGKALESNSVLKTLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCH 296

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
              G S   +   +L H+   +  +++    + L     V N+ L  + +  N I  DGA
Sbjct: 297 EM-GKSLLRNR--TLTHLDLSANRVSFDAFRQLLRGV--VHNKVLKVLKVGVNPITTDGA 351

Query: 578 FAIAQALKANE 588
           FAI Q++  ++
Sbjct: 352 FAILQSIAVSD 362



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 1/234 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG  G K +   LV+N+ V  L LSS  L   G   + E+L++N  +  + L  N +   
Sbjct: 122 IGPNGAKAVAIALVNNSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGNDLGSR 181

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   ++++L +N TI  L+++GN      A  +AK +  NK+L+EL L  N+  ++G   
Sbjct: 182 GARLISDSLRKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFREQGGVI 241

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L   L S    L  LD+  N +   GA  +   +     L  ++L  N  G EG  ++  
Sbjct: 242 LGKALES-NSVLKTLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCHEMGK 300

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           +L +NRT+T +DL  N +       + R +  N V+  L +  NPI  DGA A+
Sbjct: 301 SLLRNRTLTHLDLSANRVSFDAFRQLLRGVVHNKVLKVLKVGVNPITTDGAFAI 354



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++A AL+ NST+ SL L+ N  G+ G   + + L+ NK++ +++L GN +G  G R
Sbjct: 125 NGAKAVAIALVNNSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGNDLGSRGAR 184

Query: 349 ALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            +   L  RK + +  L+I  NS S + A H+A+ I   K+L  + L  N   ++G   +
Sbjct: 185 LISDSL--RKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFREQGGVIL 242

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             AL+ N  + T+DL  N++   GA AI   + +N+ +TSLDL++N  G +G   + + L
Sbjct: 243 GKALESNSVLKTLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCHEMGKSL 302



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 9/203 (4%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG  GA+ +A AL  N T++++DL  N + S G   +  +L+ N  I+ ++LA N +G+ 
Sbjct: 122 IGPNGAKAVAIALVNNSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGNDLGSR 181

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+ +S+ L+ +  I  L +         A  +A ++  N  +  L L  N  R++    
Sbjct: 182 GARLISDSLRKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFREQ---- 237

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRDDGA 577
             G      A+ S   +    L  N+L+    +A  + V  N  LTS+DL++N    +G 
Sbjct: 238 --GGVILGKALESNSVLKTLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGC 295

Query: 578 FAIAQALKANEDVAVTSLNLANN 600
             + ++L  N    +T L+L+ N
Sbjct: 296 HEMGKSLLRNR--TLTHLDLSAN 316



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 2/203 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +++SG +F +     +A+ +  N+  +E+  + N     G       L+SN  LK
Sbjct: 194 RTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFREQGGVILGKALESNSVLK 253

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL+LS N +   G   +C  + +N  +  L LS      EG   + + L  N  L  L+L
Sbjct: 254 TLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCHEMGKSLLRNRTLTHLDL 313

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLHGN 340
           + N + +  F  L   ++ N  ++ L +  N     GA A+ + +   + SL E+ L   
Sbjct: 314 SANRVSFDAFRQLLRGVVHNKVLKVLKVGVNPITTDGAFAILQSIAVSDSSLEEIDLKDV 373

Query: 341 SIGDEGIRALMSGLSSRKGKLAV 363
           S+ D     L+  +  R+  + V
Sbjct: 374 SV-DMDFVDLLEQIQKRRHLVCV 395



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 39/184 (21%)

Query: 447 SLDLAYNPIGADGAKALS----------------------------EVLKFHGNINTLKL 478
           SL + ++ IG +GAKA++                            E+L+ + NI+ + L
Sbjct: 114 SLVIPHHGIGPNGAKAVAIALVNNSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINL 173

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYS--LKHML 536
               +G+ GA  ++D LR N TI+ L++  N   +   +    L   + A+    L H  
Sbjct: 174 AGNDLGSRGARLISDSLRKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNT 233

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
           F        QG   L ++ +  N  L ++DL++N +R  GA AI  ++   E+  +TSL+
Sbjct: 234 FRE------QGGVILGKALE-SNSVLKTLDLSWNHLRLLGAVAICWSVA--ENTCLTSLD 284

Query: 597 LANN 600
           L+ N
Sbjct: 285 LSWN 288


>gi|390359220|ref|XP_784501.2| PREDICTED: leucine-rich repeat-containing protein 34-like
           [Strongylocentrotus purpuratus]
          Length = 411

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 145/309 (46%), Gaps = 11/309 (3%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+   + DE    L  +L +N  V  L +    + D+GA+ IAELLK    L+ L L  N
Sbjct: 60  LTDKMLQDEDAYVLLKVLANNTYVTGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCN 119

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G   +A  L  N T++ L LNGN  G  G  ALA  L+ N +L+ L L G++  D
Sbjct: 120 DLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQVNTALQSLDL-GDTDQD 178

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
                  + + +    L  L +      S   +   H A+ +K   +L  ++L   DI D
Sbjct: 179 TQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKD 238

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GAE++++ L +N  +  +DL  N I   GA  ++RVL  N+ +  LDL +N I  DGA 
Sbjct: 239 TGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPLEVLDLGHNCIEDDGAM 298

Query: 462 ALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
            LS  L   + N++TL +    I A G   +A  +  N   + + +  N   ++ C+   
Sbjct: 299 DLSRALTDMNTNLHTLVITSNNIKAPGLCAIASAMENNPNFNSVFIWGNHHEEDACNA-- 356

Query: 521 GLSFFHSAI 529
               FH  I
Sbjct: 357 ----FHRLI 361



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 14/227 (6%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N I+ KGA H+AE +K   +L  ++L  ND+G EG   IA+ L+ N T+  + L 
Sbjct: 86  LDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLN 145

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL----KLG 479
           GN I +KG  A+A VL+ N+ + SLDL           A + VL ++  +  L     L 
Sbjct: 146 GNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLL 205

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
           + Q   +   F A ML+ N+T++ L L+   ++D   +G   LS        LK++    
Sbjct: 206 FSQQEETTIHF-AKMLKVNSTLTELHLQKCDIKD---TGAERLSEMLVENIGLKYL---D 258

Query: 540 LCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           L  N ++  GAK L++   + N  L  +DL  N I DDGA  +++AL
Sbjct: 259 LACNKIRRDGAKYLSRVL-MKNTPLEVLDLGHNCIEDDGAMDLSRAL 304



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 127/288 (44%), Gaps = 33/288 (11%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           VL +N  +  L++  N I D+G + + ++L +   ++RL L   DL  EG   IA  L+ 
Sbjct: 76  VLANNTYVTGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQL 135

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG---------------NYGGAL 317
           N  L+ L+LN N I   G  +LA  L  N+ ++SL L                 NY   L
Sbjct: 136 NETLQELKLNGNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTL 195

Query: 318 GANAL----------------AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            A  +                AK L+ N +L ELHL    I D G   L   L    G L
Sbjct: 196 KALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIG-L 254

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTI 420
             LD+  N I   GA +++  +     L  ++L  N I D+GA  ++ AL   N  + T+
Sbjct: 255 KYLDLACNKIRRDGAKYLSRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNTNLHTL 314

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +  NNI + G  AIA  +++N    S+ +  N    D   A   +++
Sbjct: 315 VITSNNIKAPGLCAIASAMENNPNFNSVFIWGNHHEEDACNAFHRLIE 362



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +DM      D+G   +AE L      + +S   N +   G       LQ N  L+ L 
Sbjct: 84  TGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELK 143

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+GN IG++G   L  +L  N  ++ L L   D   +   A   +L  NS L+ L +N  
Sbjct: 144 LNGNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRP 203

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++           A+ L  NST+  LHL        GA  L++ L  N  L+ L L  N 
Sbjct: 204 LLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNK 263

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIG 400
           I  +G + L S +  +   L VLD+G+N I   GA  ++  + +  + L  + +  N+I 
Sbjct: 264 IRRDGAKYL-SRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNTNLHTLVITSNNIK 322

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             G   IA A++ N    ++ + GN+      +A  R+++  + +        P   DG 
Sbjct: 323 APGLCAIASAMENNPNFNSVFIWGNHHEEDACNAFHRLIEGGN-LEPEKTDVKPYVVDGQ 381

Query: 461 KALSEV 466
             LSE+
Sbjct: 382 VYLSEL 387



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 3/233 (1%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  KE  A   + +   + G EG   +A  L  N+T +E+    N I   G  A  GVLQ
Sbjct: 103 ELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQ 162

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKN 272
            N AL++L+L       + +     +L  N+ ++ L ++   L   ++E     A++LK 
Sbjct: 163 VNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKV 222

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS L  L L    I  +G   L+E L+EN  ++ L L  N     GA  L++ L  N  L
Sbjct: 223 NSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPL 282

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
             L L  N I D+G   L   L+     L  L I +N+I A G   +A  ++N
Sbjct: 283 EVLDLGHNCIEDDGAMDLSRALTDMNTNLHTLVITSNNIKAPGLCAIASAMEN 335



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS------FAANGITAAGIKAFDGVLQS 216
           A  S+D+   +   + +      L YN T + +       F+    T      F  +L+ 
Sbjct: 166 ALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTI---HFAKMLKV 222

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L+L    I D G + L ++LV+N G++ L L+   +R +GAK ++ +L  N+ L
Sbjct: 223 NSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPL 282

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            VL+L +N I+  G   L+ AL + N+ + +L +  N   A G  A+A  +E N +   +
Sbjct: 283 EVLDLGHNCIEDDGAMDLSRALTDMNTNLHTLVITSNNIKAPGLCAIASAMENNPNFNSV 342

Query: 336 HLHGNSIGDEGIRAL 350
            + GN   ++   A 
Sbjct: 343 FIWGNHHEEDACNAF 357


>gi|344289378|ref|XP_003416420.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2-like [Loxodonta africana]
          Length = 1065

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 4/267 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            VE L+L+   +      A+A  L++      L+L+ N +   G   L   L      ++L
Sbjct: 789  VEHLKLTFCGVGPAECAALAFALQHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 845

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D   R+ M+ L +RK     L +G
Sbjct: 846  YLRDNNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARS-MAELLARKQNFLALRLG 904

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +A+ +++  SL ++  + N +GD+GA+ +A+AL  ++++  + L GN+I
Sbjct: 905  NNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLKWLSLVGNSI 964

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+AR+L+ N V+  L L  N +  +G   L+E LK + ++  LKL    I  +G
Sbjct: 965  GSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEGLKRNSSLKVLKLSNNSITYAG 1024

Query: 488  AEFVADMLRYNNTISILDLRANGLRDE 514
            AE +   L  NNTI  + LR N    E
Sbjct: 1025 AEALLQTLERNNTILEVWLRGNTFSPE 1051



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 127/275 (46%), Gaps = 6/275 (2%)

Query: 192  AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER- 250
             E +     G+  A   A    LQ       L L  N +GD GV+ L   L    GV + 
Sbjct: 789  VEHLKLTFCGVGPAECAALAFALQHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKA 844

Query: 251  LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
            L L   ++ D G   + E   +   L+ L L NN +      S+AE L       +L L 
Sbjct: 845  LYLRDNNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMAELLARKQNFLALRLG 904

Query: 311  GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
             N+  A+GA  LA+GL  N SL+ L   GN +GD+G +AL   LS  +  L  L +  NS
Sbjct: 905  NNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALSDHQS-LKWLSLVGNS 963

Query: 371  ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
            I + GA  +A  ++    L  + L  N + DEG   +A+ LK+N ++  + L  N+I   
Sbjct: 964  IGSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEGLKRNSSLKVLKLSNNSITYA 1023

Query: 431  GASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            GA A+ + L+ N+ I  + L  N    +  + LS 
Sbjct: 1024 GAEALLQTLERNNTILEVWLRGNTFSPEEIETLSH 1058



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 114/235 (48%), Gaps = 10/235 (4%)

Query: 294  LAEALLENSTIRSL---HLNGNYGGALGAN--ALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            + E  L    +R L   HL   + G   A   ALA  L+  +    L L  NS+GD G+ 
Sbjct: 774  MQEERLAREAVRGLDVEHLKLTFCGVGPAECAALAFALQHLRQPVALQLDYNSVGDIGVE 833

Query: 349  ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             L+  L    G    L + +N+IS +G   + E+  + + L  + L+ N + D  A  +A
Sbjct: 834  QLLPCL----GVCKALYLRDNNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMA 889

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            + L + +    + LG N+I + GA  +A+ L+DN  +  L    N +G  GA+AL+E L 
Sbjct: 890  ELLARKQNFLALRLGNNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALS 949

Query: 469  FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGL 522
             H ++  L L    IG+ GA+ +A ML  N  +  L L  N L DE VC    GL
Sbjct: 950  DHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEGL 1004



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 110/225 (48%), Gaps = 3/225 (1%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A+++AELL        L 
Sbjct: 843  KALYLRDNNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMAELLARKQNFLALR 902

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I   G   LA+ L +N +++ L   GN  G  GA ALA+ L  ++SL+ L L GN
Sbjct: 903  LGNNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLKWLSLVGN 962

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            SIG  G +AL   L  +   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 963  SIGSVGAQALARML-EKNMVLEELCLEENHLHDEGVCFLAEGLKRNSSLKVLKLSNNSIT 1021

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              GAE +   L++N TI  + L GN    +    ++   KD  ++
Sbjct: 1022 YAGAEALLQTLERNNTILEVWLRGNTFSPEEIETLSH--KDTRLL 1064



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 86/169 (50%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +AE L   Q    +    N ITA G +     L+ N +L+ L   GN +GD+G + L + 
Sbjct: 888  MAELLARKQNFLALRLGNNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEA 947

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  ++ L L    +   GA+A+A +L+ N +L  L L  N +   G   LAE L  N
Sbjct: 948  LSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEGLKRN 1007

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N     GA AL + LE N ++ E+ L GN+   E I  L
Sbjct: 1008 SSLKVLKLSNNSITYAGAEALLQTLERNNTILEVWLRGNTFSPEEIETL 1056



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 88/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL     +++ E     + F ++ +   +    G   LA+ L  N + + + F 
Sbjct: 873  LALFNNKLTDGCARSMAELLARKQNFLALRLGNNHITAVGAEVLAQGLRDNCSLQFLGFW 932

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +LK L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 933  GNRVGDKGAQALAEALSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHL 992

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             DEG   +AE LK NS L+VL+L+NN I Y+G  +L + L  N+TI  + L GN
Sbjct: 993  HDEGVCFLAEGLKRNSSLKVLKLSNNSITYAGAEALLQTLERNNTILEVWLRGN 1046



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 29/236 (12%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T    ++   +L        L L  N I  
Sbjct: 851  NISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMAELLARKQNFLALRLGNNHITA 910

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L   L DN  ++ L      + D+GA+A+A                         
Sbjct: 911  VGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALA------------------------- 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
               EAL ++ +++ L L GN  G++GA ALA+ LE N  L EL L  N + DEG+  L  
Sbjct: 946  ---EALSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAE 1002

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            GL  R   L VL + NNSI+  GA  + + ++   ++L + L  N    E  E ++
Sbjct: 1003 GL-KRNSSLKVLKLSNNSITYAGAEALLQTLERNNTILEVWLRGNTFSPEEIETLS 1057


>gi|17546520|ref|NP_519922.1| GALA protein 3 [Ralstonia solanacearum GMI1000]
          Length = 522

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 209/469 (44%), Gaps = 112/469 (23%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + ++G  F D+ L  L  SL     A ++S     ITAAGI        S + L  
Sbjct: 108 ALEKLTLAG-TFTDDDLRGLPASL----KALDLSRCRGSITAAGIAHL-----SRLPLVR 157

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+    IG EG +    +L ++  +  L +S+  +  EGA+A+A     N+ L  L ++
Sbjct: 158 LNVRNKRIGAEGAR----LLANHPTLTSLNVSNGRIGPEGAQALAA----NTRLTTLNVS 209

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK--------------GLEG 328
            N I  +G    A+AL  N T+RSL ++ N  G  GA  LA               G++G
Sbjct: 210 GNRIGVAG----AKALAANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDG 265

Query: 329 ------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                 +++L  L + GN IGD G+ AL +       +L  L++ +  + A G   +A  
Sbjct: 266 ATALAASRTLTSLAIGGNEIGDAGVLALAA-----NARLTTLNVESTGVGADGVKALAA- 319

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               K+L W+ L  NDIG+ GA     AL  + ++TT+ L  + I ++GA A+A     N
Sbjct: 320 ---SKTLTWLRLDGNDIGNAGAT----ALAASTSLTTLHLEHSRIGAEGAQALAA----N 368

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM-LRYNNTI 501
           + +T+LDL YN IG  G +ALS             L W  +  +  E  + + L    T+
Sbjct: 369 TKLTTLDLGYNDIGDAGVRALSA---------NATLVWLSVRRNNLEDASAVSLAAGKTL 419

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           + LD+  NG++D                                QGAK LA      N  
Sbjct: 420 TTLDISGNGIQD--------------------------------QGAKALA-----ANPT 442

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           LT++D++ N+I+       A A     +  + SL+L NN + + G  AL
Sbjct: 443 LTTLDVSSNDIK------NAGARALAANARLVSLDLRNNRMEESGTRAL 485


>gi|386333501|ref|YP_006029671.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
 gi|334195950|gb|AEG69135.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
          Length = 462

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 43/301 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++     GD G+   A     N+    ++ + NGI  AG++A    L +N  + TL
Sbjct: 195 LTALNLRRNAIGDAGVAAFAR----NKKLTTLNVSGNGIGPAGVRA----LAANTTITTL 246

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N IGDEG + L      NA + RL  S   +  +G +A+A     ++ L  L+L+ 
Sbjct: 247 DISDNEIGDEGARALAS----NAALTRLDASDCGIGPDGTQALA----TSTTLTSLDLSY 298

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I+  G     EAL  N+T+R+LH  GN  G   A  LA     + +L  L+L  N+IG
Sbjct: 299 NEIEAEGV----EALGRNTTLRTLHACGNELGHREAELLA----ASTTLTVLNLSSNAIG 350

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G RA  +  +     LA L++ NN I    A+       +   L  ++L  N IGD  
Sbjct: 351 NAGARAFGANTT-----LAELNLSNNGIERVPAW------ADTGKLTTLDLSNNRIGDAA 399

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ +A     +RT+TT+++G N I   GA A+A     N+ + +LD++ N IG  G  AL
Sbjct: 400 AQVLA----ASRTLTTLNVGSNRIGDAGACALA----GNTTLATLDVSLNRIGKAGMLAL 451

Query: 464 S 464
           +
Sbjct: 452 A 452



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 138/288 (47%), Gaps = 46/288 (15%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L G+ +L  L+L  N+IGD G+ A      +R  KL  L++  N I   G   +A  
Sbjct: 186 ARLLAGHATLTALNLRRNAIGDAGVAAF-----ARNKKLTTLNVSGNGIGPAGVRALAAN 240

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                ++  +++  N+IGDEGA     AL  N  +T +D     I   G  A+A     +
Sbjct: 241 T----TITTLDISDNEIGDEGAR----ALASNAALTRLDASDCGIGPDGTQALA----TS 288

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLDL+YN I A+G +AL      +  + TL     ++G   AE +A     + T++
Sbjct: 289 TTLTSLDLSYNEIEAEGVEALGR----NTTLRTLHACGNELGHREAELLA----ASTTLT 340

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
           +L+L +N +      G  G   F  A  +L  +   +L  N ++     A + K     L
Sbjct: 341 VLNLSSNAI------GNAGARAF-GANTTLAEL---NLSNNGIERVPAWADTGK-----L 385

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           T++DL+ N I D    A AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 386 TTLDLSNNRIGD----AAAQVLAASR--TLTTLNVGSNRIGDAGACAL 427



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 111/245 (45%), Gaps = 45/245 (18%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+    ++A  A  +A +     +L  +NL  N IGD G      A  +N+ +TT+++ 
Sbjct: 174 LDVSGCGLNADSARLLAGH----ATLTALNLRRNAIGDAGVA----AFARNKKLTTLNVS 225

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I   G     R L  N+ IT+LD++ N IG +GA+AL+     +  +  L    C I
Sbjct: 226 GNGIGPAGV----RALAANTTITTLDISDNEIGDEGARALAS----NAALTRLDASDCGI 277

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC---NGLSFFHSAIYSLKHMLFYSL 540
           G  G + +A     + T++ LDL  N +  E          L   H+    L H      
Sbjct: 278 GPDGTQALA----TSTTLTSLDLSYNEIEAEGVEALGRNTTLRTLHACGNELGH------ 327

Query: 541 CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
                + A+ LA S       LT ++L+ N I + G    A+A  AN  +A   LNL+NN
Sbjct: 328 -----REAELLAASTT-----LTVLNLSSNAIGNAG----ARAFGANTTLA--ELNLSNN 371

Query: 601 FLTKF 605
            + + 
Sbjct: 372 GIERV 376



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 54/233 (23%)

Query: 164 FSSVDMSGRNFGDEGLFFLA--------------------ESLGYNQTAEEVSFAANGIT 203
            +++D+S    GDEG   LA                    ++L  + T   +  + N I 
Sbjct: 243 ITTLDISDNEIGDEGARALASNAALTRLDASDCGIGPDGTQALATSTTLTSLDLSYNEIE 302

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           A G++A    L  N  L+TL+  GN +G        ++L  +  +  L LSS  + + GA
Sbjct: 303 AEGVEA----LGRNTTLRTLHACGNELGHRE----AELLAASTTLTVLNLSSNAIGNAGA 354

Query: 264 KA------IAEL-LKNNSILRV-----------LELNNNMIDYSGFTSLAEALLENSTIR 305
           +A      +AEL L NN I RV           L+L+NN I  +     A+ L  + T+ 
Sbjct: 355 RAFGANTTLAELNLSNNGIERVPAWADTGKLTTLDLSNNRIGDAA----AQVLAASRTLT 410

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           +L++  N  G  GA ALA    GN +L  L +  N IG  G+ AL +  + +K
Sbjct: 411 TLNVGSNRIGDAGACALA----GNTTLATLDVSLNRIGKAGMLALAANTTLKK 459


>gi|326432833|gb|EGD78403.1| hypothetical protein PTSG_09099 [Salpingoeca sp. ATCC 50818]
          Length = 1133

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 120/228 (52%), Gaps = 3/228 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N   ++VSF  + +  +G KA    L+ N  L+ LNL  N IG+EG   L  +L  N  +
Sbjct: 41  NTGGDKVSFWRDRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTL 100

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L L S  +   GA A+A++LK+N+ +  L L+NN I   G  +LA+ L  N+T+ +L 
Sbjct: 101 TSLDLKSSRIGPVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLI 160

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L  +  G +GA ALAK L+ N ++  L L+ N+IG++G  AL   L      +  L++ +
Sbjct: 161 LKSSRIGPVGAVALAKTLQHNTTITSLELYNNNIGNKGAVALAKML-KHNTTMTTLNVSH 219

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           N I+  G  +V + ++   +   I L+  +   E +  +A  L   RT
Sbjct: 220 NHITEPGMVNVLKQLQGMDAQAKIRLF--EFKLESSTSVARTLATLRT 265



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 97/173 (56%), Gaps = 1/173 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA ALA+ L+ N  LR L+L  N IG+EG  AL   L      L  LD+ ++ I   
Sbjct: 55  GVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLK-HNTTLTSLDLKSSRIGPV 113

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ +K+  ++  + L  NDIG EGA  +A  LK N T+ T+ L  + I   GA A
Sbjct: 114 GAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGAVA 173

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           +A+ L+ N+ ITSL+L  N IG  GA AL+++LK +  + TL +    I   G
Sbjct: 174 LAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHNTTMTTLNVSHNHITEPG 226



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 117/215 (54%), Gaps = 35/215 (16%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++ + + +G  GA+ +A+ALK N  +  ++L  N I ++G  A+A++LK N+ +TSLDL 
Sbjct: 47  VSFWRDRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLK 106

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            + IG  GA AL+++LK +  + TL L    IG+ GA  +A ML++N T++ L L+++ +
Sbjct: 107 SSRIGPVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRI 166

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
                                              GA  LA++ +  N  +TS++L  N 
Sbjct: 167 GP--------------------------------VGAVALAKTLQ-HNTTITSLELYNNN 193

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           I + GA A+A+ LK N    +T+LN+++N +T+ G
Sbjct: 194 IGNKGAVALAKMLKHN--TTMTTLNVSHNHITEPG 226



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 88/143 (61%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           + +   GA  +AE +K+   L  +NL+ N IG+EG   +A  LK N T+T++DL  + I 
Sbjct: 52  DRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIG 111

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA A+A++LK N+ + +L L  N IG++GA AL+++LK +  + TL L   +IG  GA
Sbjct: 112 PVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGA 171

Query: 489 EFVADMLRYNNTISILDLRANGL 511
             +A  L++N TI+ L+L  N +
Sbjct: 172 VALAKTLQHNTTITSLELYNNNI 194



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 93/181 (51%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G  G   LAE+L  N     ++   N I   G  A   +L+ N  L +L+L  + IG  
Sbjct: 54  LGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIGPV 113

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   L  +L  N  +  L L + D+  EGA A+A++LK+N+ +  L L ++ I   G  +
Sbjct: 114 GAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGAVA 173

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+ L  N+TI SL L  N  G  GA ALAK L+ N ++  L++  N I + G+  ++  
Sbjct: 174 LAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHNTTMTTLNVSHNHITEPGMVNVLKQ 233

Query: 354 L 354
           L
Sbjct: 234 L 234



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%)

Query: 135 GTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEE 194
           G + +S +  +L     + L E  K+      +++     G+EG   LA+ L +N T   
Sbjct: 43  GGDKVSFWRDRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTS 102

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +   ++ I   G  A   +L+ N  + TL L  N IG EG   L  +L  N  +  L L 
Sbjct: 103 LDLKSSRIGPVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILK 162

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           S  +   GA A+A+ L++N+ +  LEL NN I   G  +LA+ L  N+T+ +L+++ N+ 
Sbjct: 163 SSRIGPVGAVALAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHNTTMTTLNVSHNHI 222

Query: 315 GALGANALAKGLEG 328
              G   + K L+G
Sbjct: 223 TEPGMVNVLKQLQG 236


>gi|426377569|ref|XP_004055535.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Gorilla gorilla gorilla]
          Length = 471

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMKESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G + L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGKHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 211 NQFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S  G  H+ 
Sbjct: 164 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFSDVGGKHLG 222

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N+    GA  + + L+ N T+T +DL  N   ++ A A+  VL+
Sbjct: 223 QMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLR 282

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD+  N IG +GA  +S+ L+ + ++  LKL    I   GA
Sbjct: 283 LNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGA 330



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 212 QFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
             A  + ++LR N+ +  LD+  N + +E                               
Sbjct: 272 EVALALGEVLRLNSCLVYLDIGGNDIGNE------------------------------- 300

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            GA  +++  +  NE+L  + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 301 -GASKISKGLE-SNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G K L  +L  N G+  L LS  +    GA 
Sbjct: 188 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|12653783|gb|AAH00677.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|13097567|gb|AAH03506.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|23270708|gb|AAH24037.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|325464565|gb|ADZ16053.1| ribonuclease/angiogenin inhibitor 1 [synthetic construct]
          Length = 461

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 181/427 (42%), Gaps = 13/427 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSD---ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+  L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVHVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSG 518
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D  V   
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           C GL    S +     +L+ + C         LA +  + N +L  +DL+ N + D G  
Sbjct: 362 CQGLGQPGSVL----RVLWLADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGIL 416

Query: 579 AIAQALK 585
            + ++++
Sbjct: 417 QLVESVR 423



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVHVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|405973836|gb|EKC38526.1| hypothetical protein CGI_10017082 [Crassostrea gigas]
          Length = 454

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 8/271 (2%)

Query: 212 GVLQSNIALK-----TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           GV+ S+  L+      L+L  + IG  G K +   L++N  V  L L    L  EG ++I
Sbjct: 32  GVVPSSYFLRHMQDSVLSLRHHGIGSLGAKAISFPLMNNTAVIHLDLQDNWLEGEGGESI 91

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           A +LK N  +  L+++ N +   G  SL   L  N+T+++++L+GN      A    +  
Sbjct: 92  ARMLKENCYITDLDISENRLGGKGAKSLCNMLTTNTTLKNINLSGNLFSDHHAGYFLEAF 151

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-N 385
             N  L+ ++L  N   D     L   ++  +  +  LD+  N         + E I  N
Sbjct: 152 SENSRLKYVNLSHNEFSDNAAIVLGQAIAENE-TIEELDLSWNFFRRGNTLKLCEGISSN 210

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
           C+ L  INL MN  GDEGA  +A+ LK++ T+  +D+  N I   GA+AI + L  N  +
Sbjct: 211 CR-LKEINLAMNGFGDEGALAVAELLKRSTTLYVLDISYNRISQIGATAIGKALDQNDAL 269

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
            +L + +NP+G  GAK + + + +   + TL
Sbjct: 270 RTLRIGHNPLGVAGAKEILQGVGYENCVITL 300



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 125/246 (50%), Gaps = 2/246 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAI+  L NN+ +  L+L +N ++  G  S+A  L EN  I  L ++ N  G  GA +
Sbjct: 59  GAKAISFPLMNNTAVIHLDLQDNWLEGEGGESIARMLKENCYITDLDISENRLGGKGAKS 118

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L   L  N +L+ ++L GN   D      +   S    +L  +++ +N  S   A  + +
Sbjct: 119 LCNMLTTNTTLKNINLSGNLFSDHHAGYFLEAFS-ENSRLKYVNLSHNEFSDNAAIVLGQ 177

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I   +++  ++L  N        K+ + +  N  +  I+L  N    +GA A+A +LK 
Sbjct: 178 AIAENETIEELDLSWNFFRRGNTLKLCEGISSNCRLKEINLAMNGFGDEGALAVAELLKR 237

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN-T 500
           ++ +  LD++YN I   GA A+ + L  +  + TL++G   +G +GA+ +   + Y N  
Sbjct: 238 STTLYVLDISYNRISQIGATAIGKALDQNDALRTLRIGHNPLGVAGAKEILQGVGYENCV 297

Query: 501 ISILDL 506
           I++LDL
Sbjct: 298 ITLLDL 303



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 2/226 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G ++   +L+ N  +  L++S N +G +G K LC++L  N  ++ + LS     
Sbjct: 81  NWLEGEGGESIARMLKENCYITDLDISENRLGGKGAKSLCNMLTTNTTLKNINLSGNLFS 140

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D  A    E    NS L+ + L++N    +    L +A+ EN TI  L L+ N+      
Sbjct: 141 DHHAGYFLEAFSENSRLKYVNLSHNEFSDNAAIVLGQAIAENETIEELDLSWNFFRRGNT 200

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L +G+  N  L+E++L  N  GDEG  A+ + L  R   L VLDI  N IS  GA  +
Sbjct: 201 LKLCEGISSNCRLKEINLAMNGFGDEGALAV-AELLKRSTTLYVLDISYNRISQIGATAI 259

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGG 424
            + +    +L  + +  N +G  GA++I   +  +N  IT +DL G
Sbjct: 260 GKALDQNDALRTLRIGHNPLGVAGAKEILQGVGYENCVITLLDLSG 305



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 9/225 (4%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  + IG  GA+ I+  L  N  +  +DL  N +  +G  +IAR+LK+N  IT LD++
Sbjct: 48  LSLRHHGIGSLGAKAISFPLMNNTAVIHLDLQDNWLEGEGGESIARMLKENCYITDLDIS 107

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +G  GAK+L  +L  +  +  + L         A +  +    N+ +  ++L  N  
Sbjct: 108 ENRLGGKGAKSLCNMLTTNTTLKNINLSGNLFSDHHAGYFLEAFSENSRLKYVNLSHNEF 167

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAFN 570
            D      N       AI   + +    L  N+ +    L     +  N  L  I+LA N
Sbjct: 168 SD------NAAIVLGQAIAENETIEELDLSWNFFRRGNTLKLCEGISSNCRLKEINLAMN 221

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
              D+GA A+A+ LK +  + V  L+++ N +++ G +A+  A D
Sbjct: 222 GFGDEGALAVAELLKRSTTLYV--LDISYNRISQIGATAIGKALD 264



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 13/249 (5%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R  + +VL + ++ I + GA  ++  + N  +++ ++L  N +  EG E IA  LK+N  
Sbjct: 41  RHMQDSVLSLRHHGIGSLGAKAISFPLMNNTAVIHLDLQDNWLEGEGGESIARMLKENCY 100

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           IT +D+  N +  KGA ++  +L  N+ + +++L+ N      A    E    +  +  +
Sbjct: 101 ITDLDISENRLGGKGAKSLCNMLTTNTTLKNINLSGNLFSDHHAGYFLEAFSENSRLKYV 160

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCSGCNGLSFFHSAIYSLKHM 535
            L   +   + A  +   +  N TI  LDL  N  R       C G+    S+   LK +
Sbjct: 161 NLSHNEFSDNAAIVLGQAIAENETIEELDLSWNFFRRGNTLKLCEGI----SSNCRLKEI 216

Query: 536 LFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 593
              +L +N    +GA  +A+  K  +  L  +D+++N I   GA AI +AL  N+  A+ 
Sbjct: 217 ---NLAMNGFGDEGALAVAELLK-RSTTLYVLDISYNRISQIGATAIGKALDQND--ALR 270

Query: 594 SLNLANNFL 602
           +L + +N L
Sbjct: 271 TLRIGHNPL 279



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 10/292 (3%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G+LGA A++  L  N ++  L L  N +  EG  ++   L      +  LDI  N +  K
Sbjct: 56  GSLGAKAISFPLMNNTAVIHLDLQDNWLEGEGGESIARMLK-ENCYITDLDISENRLGGK 114

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +   +    +L  INL  N   D  A    +A  +N  +  ++L  N      A  
Sbjct: 115 GAKSLCNMLTTNTTLKNINLSGNLFSDHHAGYFLEAFSENSRLKYVNLSHNEFSDNAAIV 174

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           + + + +N  I  LDL++N         L E +  +  +  + L     G  GA  VA++
Sbjct: 175 LGQAIAENETIEELDLSWNFFRRGNTLKLCEGISSNCRLKEINLAMNGFGDEGALAVAEL 234

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLA 552
           L+ + T+ +LD+  N +     +        + A+ +L+      +  N L   GAK + 
Sbjct: 235 LKRSTTLYVLDISYNRISQIGATAIGKALDQNDALRTLR------IGHNPLGVAGAKEIL 288

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           Q     N  +T +DL+  E+ D     I Q+L+  ++V V    + ++++ K
Sbjct: 289 QGVGYENCVITLLDLSGVEV-DKEFREIKQSLEETKEVNVIHGVVLSDYVIK 339


>gi|328875676|gb|EGG24040.1| hypothetical protein DFA_06178 [Dictyostelium fasciculatum]
          Length = 1451

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 165/356 (46%), Gaps = 11/356 (3%)

Query: 163  AFSSVDMSGRNF--GD--EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
            A +S+D+S      GD  E L  + E+   +     ++    G+   GI     +L+   
Sbjct: 1017 AITSIDLSNNPLMGGDLAEPLKIILET---SPNIVHINLKNIGLAGKGIGNVVSILEKKK 1073

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             ++TL++  N + D GVK +   L   + +  L L    + DEG   I +LL+ N  L  
Sbjct: 1074 NIQTLHIGKNRLADIGVKSILKSL-KQSTISTLGLEETAIFDEGCIIIQKLLQKNRTLTS 1132

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHL 337
            L ++ N I  +GF  + E L  N  +  L+L+GN  G    N   + +   N  L +L +
Sbjct: 1133 LNISKNKITENGFKVMFEGLRNNQVLSELYLSGNPIGHKYINRFLQWISTNNNQLTKLAI 1192

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
               S+       ++  L+    +L+VLD+  N +   G+ HV   I N  ++L ++L  N
Sbjct: 1193 ASTSLNSNSGAEILKILTGNTCRLSVLDVSLNHLGPDGSKHVINGIANNNTILDVSLSGN 1252

Query: 398  DIGDEGAEKIADALKQNRT--ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             I   G  ++ ++L+ + +  IT + L   N++SK    I ++L+ N  IT LDL+ N  
Sbjct: 1253 KISTLGCNELCNSLELSASCIITKLSLRFCNLNSKSIYRICKMLETNKTITQLDLSLNKF 1312

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
                 +ALS+ L  +  +    +  C+IG      +   L+ N++I  L L  N +
Sbjct: 1313 SKSSCQALSQSLPSNTTLEEFFITNCEIGHKEFAAILPGLQMNSSIKKLYLDFNPI 1368



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 111/520 (21%), Positives = 217/520 (41%), Gaps = 62/520 (11%)

Query: 99   VSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNE-- 156
            +S+ F L++       P+P + S P    +         L   +  K   +    ++E  
Sbjct: 911  ISSQFALFQ------PPRPRQKSDPLRSRLELFKSIYLTLCQNYRTKHILKFVDQIDELL 964

Query: 157  -----FAKELRAFSSVDMSGRNFGDEGLFFLAESL--GYNQTAEE------------VSF 197
                 F ++L  +S++D+S  +     + F+ ++L   +N   EE            +  
Sbjct: 965  DKEGSFRQKL-LYSTIDLSSSSIRANDISFIGDALRDAFNTPIEEGETIVENLAITSIDL 1023

Query: 198  AANGITAAGI-KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            + N +    + +    +L+++  +  +NL    +  +G+  +  IL     ++ L +   
Sbjct: 1024 SNNPLMGGDLAEPLKIILETSPNIVHINLKNIGLAGKGIGNVVSILEKKKNIQTLHIGKN 1083

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             L D G K+I + LK ++I   L L    I   G   + + L +N T+ SL+++ N    
Sbjct: 1084 RLADIGVKSILKSLKQSTI-STLGLEETAIFDEGCIIIQKLLQKNRTLTSLNISKNKITE 1142

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             G   + +GL  N+ L EL+L GN IG + I   +  +S+   +L  L I + S+++   
Sbjct: 1143 NGFKVMFEGLRNNQVLSELYLSGNPIGHKYINRFLQWISTNNNQLTKLAIASTSLNSNSG 1202

Query: 377  FHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
              + + +  N   L  +++ +N +G +G++ + + +  N TI  + L GN I + G    
Sbjct: 1203 AEILKILTGNTCRLSVLDVSLNHLGPDGSKHVINGIANNNTILDVSLSGNKISTLGC--- 1259

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
                  N +  SL+L+ + I                 I  L L +C + +     +  ML
Sbjct: 1260 ------NELCNSLELSASCI-----------------ITKLSLRFCNLNSKSIYRICKML 1296

Query: 496  RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
              N TI+ LDL  N       S C  LS    +  +L+     +  I + + A  L    
Sbjct: 1297 ETNKTITQLDLSLNKFSK---SSCQALSQSLPSNTTLEEFFITNCEIGHKEFAAILPG-- 1351

Query: 556  KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
              +N ++  + L FN I + G   +   +  N  + V ++
Sbjct: 1352 LQMNSSIKKLYLDFNPIGNKGIRLLCDVINNNNSMEVITI 1391



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 130/312 (41%), Gaps = 33/312 (10%)

Query: 176  DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
            DEG   + + L  N+T   ++ + N IT  G K     L++N  L  L LSGNPIG + +
Sbjct: 1114 DEGCIIIQKLLQKNRTLTSLNISKNKITENGFKVMFEGLRNNQVLSELYLSGNPIGHKYI 1173

Query: 236  -KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
             + L  I  +N  + +L ++S  L       I ++L  N+  L VL+++ N +   G   
Sbjct: 1174 NRFLQWISTNNNQLTKLAIASTSLNSNSGAEILKILTGNTCRLSVLDVSLNHLGPDGSKH 1233

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALA------------------------------ 323
            +   +  N+TI  + L+GN    LG N L                               
Sbjct: 1234 VINGIANNNTILDVSLSGNKISTLGCNELCNSLELSASCIITKLSLRFCNLNSKSIYRIC 1293

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
            K LE NK++ +L L  N       +AL   L S    L    I N  I  K    +   +
Sbjct: 1294 KMLETNKTITQLDLSLNKFSKSSCQALSQSLPS-NTTLEEFFITNCEIGHKEFAAILPGL 1352

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            +   S+  + L  N IG++G   + D +  N ++  I +    IH+K      + L  N 
Sbjct: 1353 QMNSSIKKLYLDFNPIGNKGIRLLCDVINNNNSMEVITIRNAEIHAKEVLEFLKGLNTNI 1412

Query: 444  VITSLDLAYNPI 455
             +  L+L  NPI
Sbjct: 1413 TLHKLNLTENPI 1424



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL---QSNI 218
            +  + +D+S   F       L++SL  N T EE  F  N     G K F  +L   Q N 
Sbjct: 1300 KTITQLDLSLNKFSKSSCQALSQSLPSNTTLEEF-FITN--CEIGHKEFAAILPGLQMNS 1356

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK---NNSI 275
            ++K L L  NPIG++G++ LCD++ +N  +E + + + ++    AK + E LK    N  
Sbjct: 1357 SIKKLYLDFNPIGNKGIRLLCDVINNNNSMEVITIRNAEIH---AKEVLEFLKGLNTNIT 1413

Query: 276  LRVLELNNNMI 286
            L  L L  N I
Sbjct: 1414 LHKLNLTENPI 1424



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 34/221 (15%)

Query: 410  ALKQNRTITTIDLGGNNIHSKGASAIARVLKD--------------NSVITSLDLAYNPI 455
            + +Q    +TIDL  ++I +   S I   L+D              N  ITS+DL+ NP+
Sbjct: 969  SFRQKLLYSTIDLSSSSIRANDISFIGDALRDAFNTPIEEGETIVENLAITSIDLSNNPL 1028

Query: 456  -GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             G D A+ L  +L+   NI  + L    +   G   V  +L     I  L +  N L D 
Sbjct: 1029 MGGDLAEPLKIILETSPNIVHINLKNIGLAGKGIGNVVSILEKKKNIQTLHIGKNRLAD- 1087

Query: 515  VCSGCNGL--SFFHSAIYSL---KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF 569
               G   +  S   S I +L   +  +F   CI        + Q     N  LTS++++ 
Sbjct: 1088 --IGVKSILKSLKQSTISTLGLEETAIFDEGCI--------IIQKLLQKNRTLTSLNISK 1137

Query: 570  NEIRDDGAFAIAQALKANEDVAVTSLN---LANNFLTKFGQ 607
            N+I ++G   + + L+ N+ ++   L+   + + ++ +F Q
Sbjct: 1138 NKITENGFKVMFEGLRNNQVLSELYLSGNPIGHKYINRFLQ 1178


>gi|338719804|ref|XP_001916614.2| PREDICTED: uncharacterized protein C14orf166B-like [Equus caballus]
          Length = 506

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 129/275 (46%), Gaps = 28/275 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+ TL L  N I  EG+  L  +L +N  +
Sbjct: 106 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENYYL 165

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + L LS  DL  EGA+ I+E L+ N+                           S++ +L 
Sbjct: 166 QELNLSDNDLGLEGARIISEFLQRNT---------------------------SSLSNLQ 198

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A  L++ L  +  ++ L L  N   D+G   L   L+   G L  LD+  
Sbjct: 199 LSGNNFKDEAAELLSQALSSDYRIKSLDLSHNQFSDKGGEHLGQMLALNVG-LQSLDLSW 257

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N    +GA  +   ++   +L  +++ MN  G+EGA  + D L+ N ++  +D+ GN+I 
Sbjct: 258 NHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALGDVLRLNNSLAYLDVSGNDIS 317

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           ++G S I+R L+ N  +  L L  NP+  DGA  L
Sbjct: 318 NEGVSKISRGLELNDSLKVLKLFLNPMSMDGAVLL 352



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 135/271 (49%), Gaps = 4/271 (1%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL + L EN  ++ L+L+ N  G  GA  
Sbjct: 123 GTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENYYLQELNLSDNDLGLEGARI 182

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +++ L+ N  SL  L L GN+  DE    L   LSS   ++  LD+ +N  S KG  H+ 
Sbjct: 183 ISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSS-DYRIKSLDLSHNQFSDKGGEHLG 241

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N T+  +D+  N   ++GA+A+  VL+
Sbjct: 242 QMLALNVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALGDVLR 301

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +  LD++ N I  +G   +S  L+ + ++  LKL    +   GA  +   ++ N  
Sbjct: 302 LNNSLAYLDVSGNDISNEGVSKISRGLELNDSLKVLKLFLNPMSMDGAVLLILSIKRNPK 361

Query: 501 ISI--LDLRANGLRDEVCSGCNGLSFFHSAI 529
            S+  LD+    + ++     +G+   H  +
Sbjct: 362 SSMEELDISNVLVSEQFVKTLDGVYAVHPQL 392



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 136/264 (51%), Gaps = 2/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N     +    N I A GI +   +L+ N  L+ LN
Sbjct: 110 SYVNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENYYLQELN 169

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           LS N +G EG + + + L  N + +  LQLS  + +DE A+ +++ L ++  ++ L+L++
Sbjct: 170 LSDNDLGLEGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSH 229

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  ++SL L+ N+    GA AL  GL  N +L++L +  N  G
Sbjct: 230 NQFSDKGGEHLGQMLALNVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFG 289

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      LA LD+  N IS +G   ++  ++   SL  + L++N +  +G
Sbjct: 290 NEGATALGDVL-RLNNSLAYLDVSGNDISNEGVSKISRGLELNDSLKVLKLFLNPMSMDG 348

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  +  ++K+N   +  +L  +N+
Sbjct: 349 AVLLILSIKRNPKSSMEELDISNV 372



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 41/320 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I  EGI +L   L      L  L++
Sbjct: 112 VNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENY-YLQELNL 170

Query: 367 GNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E++ +N  SL  + L  N+  DE AE ++ AL  +  I ++DL  N
Sbjct: 171 SDNDLGLEGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSHN 230

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               KG   + ++L  N  + SLDL++N     GA AL   L+ +  +  L +     G 
Sbjct: 231 QFSDKGGEHLGQMLALNVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGN 290

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + D+LR NN+++ LD+  N + +E                               
Sbjct: 291 EGATALGDVLRLNNSLAYLDVSGNDISNE------------------------------- 319

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
            G   +++  + +N++L  + L  N +  DGA  +  ++K N   ++  L+++N  +++ 
Sbjct: 320 -GVSKISRGLE-LNDSLKVLKLFLNPMSMDGAVLLILSIKRNPKSSMEELDISNVLVSEQ 377

Query: 606 ------GQSALTDAKDLVYE 619
                 G  A+    D+VY+
Sbjct: 378 FVKTLDGVYAVHPQLDVVYK 397



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 13/245 (5%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N  + T++L  N I ++G  +
Sbjct: 96  GVVPVSYFIRNMEES-YVNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVS 154

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           + ++L++N  +  L+L+ N +G +GA+ +SE L+ +  +++ L+L         AE ++ 
Sbjct: 155 LTQMLRENYYLQELNLSDNDLGLEGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQ 214

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN--YLQGAKCL 551
            L  +  I  LDL  N   D+       +   +  + SL       L  N  Y +GA  L
Sbjct: 215 ALSSDYRIKSLDLSHNQFSDKGGEHLGQMLALNVGLQSL------DLSWNHFYTRGAVAL 268

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
               +  N  L  +D++ N   ++GA A+   L+ N  +A   L+++ N ++  G S ++
Sbjct: 269 CNGLR-TNVTLKKLDVSMNGFGNEGATALGDVLRLNNSLAY--LDVSGNDISNEGVSKIS 325

Query: 612 DAKDL 616
              +L
Sbjct: 326 RGLEL 330



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 149 ESKQTLNEF-AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + ++EF  +   + S++ +SG NF DE    L+++L  +   + +  + N  +  G 
Sbjct: 178 EGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSHNQFSDKGG 237

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L++L+LS N     G   LC+ L  N  +++L +S     +EGA A+ 
Sbjct: 238 EHLGQMLALNVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALG 297

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           ++L+ N+ L  L+++ N I   G + ++  L  N +++ L L  N     GA  L   ++
Sbjct: 298 DVLRLNNSLAYLDVSGNDISNEGVSKISRGLELNDSLKVLKLFLNPMSMDGAVLLILSIK 357

Query: 328 GNK--SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            N   S+ EL +    + ++ ++ L  G+ +   +L V+      +SAK A         
Sbjct: 358 RNPKSSMEELDISNVLVSEQFVKTL-DGVYAVHPQLDVVYKAVQGLSAKKAV-------- 408

Query: 386 CKSLLWINLY--MNDIGDEGAEKIADALK 412
              LLW N    +    D+    + D LK
Sbjct: 409 ---LLWTNPMKLIQSYADQHKITVVDFLK 434


>gi|432945011|ref|XP_004083482.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Oryzias latipes]
          Length = 433

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 120/226 (53%), Gaps = 5/226 (2%)

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + Y    +LA+AL    T++   L+ ++        L K L  + SL EL    N IGD 
Sbjct: 202 MTYRDCETLAKALQSCKTLKLFRLHQSHMDDRKCQLLVKHLMDHPSLEELDFCHNKIGDV 261

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGA 404
           G RA+   L+  + KL  L++ NN IS +GA  +A  + KNC +L  +NL +N I DEG 
Sbjct: 262 GARAISKLLT--RNKLQTLNLCNNLISCQGAKAIALALSKNC-TLESLNLLLNMIKDEGG 318

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IA+AL  N T+  ++LGGN + S  A A+++VL +N+ + SL+L+ N +   G +AL 
Sbjct: 319 QAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLSCNQLCEVGGEALV 378

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             L  +  I    +   Q+    + F+ + L + N +S L  +  G
Sbjct: 379 AALSQNSTIKECDVHLTQVDDQRS-FLINKLLWANQMSQLKTQRKG 423



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 4/208 (1%)

Query: 141 GFTGKLFRESKQTLNEFAKELRAFSSVDM---SGRNFGDEGLFFLAESLGYNQTAEEVSF 197
            F   +F  + +     AK L++  ++ +      +  D     L + L  + + EE+ F
Sbjct: 194 NFAWNMFEMTYRDCETLAKALQSCKTLKLFRLHQSHMDDRKCQLLVKHLMDHPSLEELDF 253

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
             N I   G +A   +L  N  L+TLNL  N I  +G K +   L  N  +E L L    
Sbjct: 254 CHNKIGDVGARAISKLLTRN-KLQTLNLCNNLISCQGAKAIALALSKNCTLESLNLLLNM 312

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           ++DEG +AIAE L NN+ L  L L  N +      ++++ L EN+T++SL+L+ N    +
Sbjct: 313 IKDEGGQAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLSCNQLCEV 372

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDE 345
           G  AL   L  N +++E  +H   + D+
Sbjct: 373 GGEALVAALSQNSTIKECDVHLTQVDDQ 400



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 162/390 (41%), Gaps = 42/390 (10%)

Query: 24  SRSFCQARDAPLSFALPFSGT----------RRCFRLKRLVVKAAARPEGGRRQRRVYRQ 73
            + F Q R   LS +LP   T          RRC + K      +     G   +R++ +
Sbjct: 45  QKEFLQER---LSLSLPVQVTASVLPEGPYWRRCCQQKLAFCDVSVH---GHSWKRMFLE 98

Query: 74  SQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMP--KPSRPSKPTAEGMNWS 131
              +  +            V   V V   +V    + +LL+P  +P + SK      +W 
Sbjct: 99  KHLEKIIELFIPNVTDPQTVLDVVSVCEKYVKRLDISQLLVPVVEPQKKSKENDHDFHWK 158

Query: 132 VGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLF--------FLA 183
                  +  F   +  +    L    +EL     +   G NF    +F         LA
Sbjct: 159 RYVPP--MDHFDFNILLQRLTNL----EELHLVYRIKQCGMNFA-WNMFEMTYRDCETLA 211

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           ++L   +T +      + +     +     L  + +L+ L+   N IGD G + +  +L 
Sbjct: 212 KALQSCKTLKLFRLHQSHMDDRKCQLLVKHLMDHPSLEELDFCHNKIGDVGARAISKLLT 271

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
            N  ++ L L +  +  +GAKAIA  L  N  L  L L  NMI   G  ++AEALL N+T
Sbjct: 272 RN-KLQTLNLCNNLISCQGAKAIALALSKNCTLESLNLLLNMIKDEGGQAIAEALLNNTT 330

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + +L+L GNY  ++ A A++K L  N +L+ L+L  N + + G  AL++ L S+   +  
Sbjct: 331 LHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLSCNQLCEVGGEALVAAL-SQNSTIKE 389

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            D+    +  + +F +         LLW N
Sbjct: 390 CDVHLTQVDDQRSFLI-------NKLLWAN 412



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DEG   +AE+L  N T   ++   N +T+   +A   VL  N  L++LNLS N + + G 
Sbjct: 315 DEGGQAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLSCNQLCEVGG 374

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           + L   L  N+ ++   +    + D+ +  I +LL  N +
Sbjct: 375 EALVAALSQNSTIKECDVHLTQVDDQRSFLINKLLWANQM 414



 Score = 39.7 bits (91), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 66/235 (28%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            H+   IK C      N++  ++     E +A AL+  +T+    L  +++  +    + 
Sbjct: 182 LHLVYRIKQCGMNFAWNMF--EMTYRDCETLAKALQSCKTLKLFRLHQSHMDDRKCQLLV 239

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + L D+  +  LD  +N                            +IG  GA  ++ +L 
Sbjct: 240 KHLMDHPSLEELDFCHN----------------------------KIGDVGARAISKLLT 271

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
             N +  L+L            CN L                       QGAK +A +  
Sbjct: 272 -RNKLQTLNL------------CNNLI--------------------SCQGAKAIALALS 298

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
             N  L S++L  N I+D+G  AIA+AL  N    + +LNL  N+LT     A++
Sbjct: 299 K-NCTLESLNLLLNMIKDEGGQAIAEALLNN--TTLHNLNLGGNYLTSVTAEAVS 350


>gi|326428256|gb|EGD73826.1| hypothetical protein PTSG_05519 [Salpingoeca sp. ATCC 50818]
          Length = 380

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 146/308 (47%), Gaps = 27/308 (8%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           IT A +      L+SN ++  L+LS N I D G   +  +L  N  +  L L   D+ + 
Sbjct: 51  ITDAALGPICEALKSNSSVFYLDLSYNRITDAGAATISRLLETNHSIISLSLDCNDITER 110

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA  I+++L+ NS L++L L  N I  +G  SLA  L  N T+ SL +           A
Sbjct: 111 GADTISKMLQVNSALKILSLRGNKIGRAGNLSLASVLQVNQTLESLDVGETDADCSAVIA 170

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            A  L GN +L+ L+L                      +L        +   +G  H+AE
Sbjct: 171 YAAALAGNTALKSLNLD---------------------RLVSF-----TQQEEGTVHIAE 204

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K   +L  +++  + + D G  ++  ALK N T+ T+DL  N I   GA+ + RVL+ 
Sbjct: 205 MLKQNTTLTSLSMQKHGMTDFGVGRLCQALKDNATLATLDLSCNKITRDGAAELGRVLQT 264

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ + SL L  N +  +GA  L + +    NI+ L L + ++ A G   VAD +R ++ +
Sbjct: 265 NTSLRSLQLNNNSLEDEGASILMKAV-VGTNIDALGLAYNRLCAEGVHAVADGIRAHSRL 323

Query: 502 SILDLRAN 509
           + L L  N
Sbjct: 324 TRLSLWGN 331



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 129/294 (43%), Gaps = 39/294 (13%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           L    + L++ SSV   D+S     D G   ++  L  N +   +S   N IT  G    
Sbjct: 56  LGPICEALKSNSSVFYLDLSYNRITDAGAATISRLLETNHSIISLSLDCNDITERGADTI 115

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL------------ 258
             +LQ N ALK L+L GN IG  G   L  +L  N  +E L +   D             
Sbjct: 116 SKMLQVNSALKILSLRGNKIGRAGNLSLASVLQVNQTLESLDVGETDADCSAVIAYAAAL 175

Query: 259 -------------------RDEGAKAIAELLKNNSILRVLELNNN-MIDYSGFTSLAEAL 298
                              ++EG   IAE+LK N+ L  L +  + M D+ G   L +AL
Sbjct: 176 AGNTALKSLNLDRLVSFTQQEEGTVHIAEMLKQNTTLTSLSMQKHGMTDF-GVGRLCQAL 234

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            +N+T+ +L L+ N     GA  L + L+ N SLR L L+ NS+ DEG   LM  +    
Sbjct: 235 KDNATLATLDLSCNKITRDGAAELGRVLQTNTSLRSLQLNNNSLEDEGASILMKAVVGT- 293

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
             +  L +  N + A+G   VA+ I+    L  ++L+ N  G  G    ADA +
Sbjct: 294 -NIDALGLAYNRLCAEGVHAVADGIRAHSRLTRLSLWGNP-GLAGTTADADACR 345



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 66/280 (23%)

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           ++GN  I+      + E +K+  S+ +++L  N I D GA  I+  L+ N +I ++ L  
Sbjct: 45  ELGNICITDAALGPICEALKSNSSVFYLDLSYNRITDAGAATISRLLETNHSIISLSLDC 104

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+I  +GA  I+++L+ NS +  L L  N IG  G  +L+ VL+ +  + +L +G     
Sbjct: 105 NDITERGADTISKMLQVNSALKILSLRGNKIGRAGNLSLASVLQVNQTLESLDVGETDAD 164

Query: 485 AS-------------------------------GAEFVADMLRYNNTISILDLRANGLRD 513
            S                               G   +A+ML+ N T++ L ++ +G+ D
Sbjct: 165 CSAVIAYAAALAGNTALKSLNLDRLVSFTQQEEGTVHIAEMLKQNTTLTSLSMQKHGMTD 224

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                     F                      G   L Q+ K  N  L ++DL+ N+I 
Sbjct: 225 ----------F----------------------GVGRLCQALK-DNATLATLDLSCNKIT 251

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            DGA  + + L+ N   ++ SL L NN L   G S L  A
Sbjct: 252 RDGAAELGRVLQTN--TSLRSLQLNNNSLEDEGASILMKA 289


>gi|123413398|ref|XP_001304269.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121885709|gb|EAX91339.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 732

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 173/356 (48%), Gaps = 11/356 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG-IKAFDGVLQSNIAL 220
           R F  +D+S     D+G  +LAE L Y+    ++   +N I   G ++ F+G++  N  L
Sbjct: 118 RPFYFMDLSLNRLSDQGASYLAEYLSYDPLLIQLDLKSNNIGIDGCVQIFEGLMH-NQHL 176

Query: 221 KTLNLSG------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
            TL+LS       N IG  G + L ++L+ N  +  L ++   +  EG   I + L NN+
Sbjct: 177 TTLDLSAIDGIDRNRIGTPGCEALANLLLSNGVLCNLNIAMCGVTAEGCHHIGQALPNNT 236

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L+L++N    +G  S+         + SL L+ N  G     AL   L   KSLR 
Sbjct: 237 SLTHLDLSSNRFGSAGANSMFSQPGALGALESLVLSRNLIGDDAGPALVTQLSRAKSLRY 296

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+     ++ ++    +   +++ L + +N ++ +   ++   +K    +  +NL
Sbjct: 297 LDLSRNNFTKGFLKYILQAYDN-GCRVSNLSLAHNKLN-ESLEYLCHVLKTYSKIRILNL 354

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYN 453
             N IGD G  K+ ++L+QN +++ +DL      SKGA+AI+ VL +  + I  L L  N
Sbjct: 355 SGNKIGDNGIIKLMESLEQNTSLSILDLSQTECTSKGAAAISVVLANGVTPIQKLYLNNN 414

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            I  DG   L E ++ +  + ++ L   ++    A  +  +L+ N TI  +D+  N
Sbjct: 415 KISDDGGVRLFEAIENNTTLVSISLKNNEMKDKTAATLIKILKTNTTIGDIDVTMN 470



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 167/388 (43%), Gaps = 21/388 (5%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           I  KTLN +G  +G    + L  +L        + LS   L D+GA  +AE L  + +L 
Sbjct: 90  IRKKTLNFTGLGLGPLSSQYLMALLPFKRPFYFMDLSLNRLSDQGASYLAEYLSYDPLLI 149

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG------NYGGALGANALAKGLEGNKS 331
            L+L +N I   G   + E L+ N  + +L L+       N  G  G  ALA  L  N  
Sbjct: 150 QLDLKSNNIGIDGCVQIFEGLMHNQHLTTLDLSAIDGIDRNRIGTPGCEALANLLLSNGV 209

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L++    +  EG   +   L +    L  LD+ +N   + GA  +        +L  
Sbjct: 210 LCNLNIAMCGVTAEGCHHIGQALPNNTS-LTHLDLSSNRFGSAGANSMFSQPGALGALES 268

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  N IGD+    +   L + +++  +DL  NN        I +   +   +++L LA
Sbjct: 269 LVLSRNLIGDDAGPALVTQLSRAKSLRYLDLSRNNFTKGFLKYILQAYDNGCRVSNLSLA 328

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           +N +  +  + L  VLK +  I  L L   +IG +G   + + L  N ++SILDL     
Sbjct: 329 HNKLN-ESLEYLCHVLKTYSKIRILNLSGNKIGDNGIIKLMESLEQNTSLSILDLSQTEC 387

Query: 512 RDEVCSGCNGLS-FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV--NEALTSIDLA 568
                 G   +S    + +  ++ +   +  I+   G +     F+ +  N  L SI L 
Sbjct: 388 ---TSKGAAAISVVLANGVTPIQKLYLNNNKISDDGGVRL----FEAIENNTTLVSISLK 440

Query: 569 FNEIRDDGAFAIAQALKANE---DVAVT 593
            NE++D  A  + + LK N    D+ VT
Sbjct: 441 NNEMKDKTAATLIKILKTNTTIGDIDVT 468



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 1/266 (0%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           EG   + ++L  N +   +  ++N   +AG  +      +  AL++L LS N IGD+   
Sbjct: 223 EGCHHIGQALPNNTSLTHLDLSSNRFGSAGANSMFSQPGALGALESLVLSRNLIGDDAGP 282

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            L   L     +  L LS  +      K I +   N   +  L L +N ++ S    L  
Sbjct: 283 ALVTQLSRAKSLRYLDLSRNNFTKGFLKYILQAYDNGCRVSNLSLAHNKLNES-LEYLCH 341

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            L   S IR L+L+GN  G  G   L + LE N SL  L L       +G  A+   L++
Sbjct: 342 VLKTYSKIRILNLSGNKIGDNGIIKLMESLEQNTSLSILDLSQTECTSKGAAAISVVLAN 401

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
               +  L + NN IS  G   + E I+N  +L+ I+L  N++ D+ A  +   LK N T
Sbjct: 402 GVTPIQKLYLNNNKISDDGGVRLFEAIENNTTLVSISLKNNEMKDKTAATLIKILKTNTT 461

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDN 442
           I  ID+  N+   +    +A +++++
Sbjct: 462 IGDIDVTMNDFSYRSYVKVASLIEEH 487



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 3/263 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +D+S   FG  G   +    G     E +  + N I      A    L    +L+ 
Sbjct: 237 SLTHLDLSSNRFGSAGANSMFSQPGALGALESLVLSRNLIGDDAGPALVTQLSRAKSLRY 296

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N      +K +     +   V  L L+   L +E  + +  +LK  S +R+L L+
Sbjct: 297 LDLSRNNFTKGFLKYILQAYDNGCRVSNLSLAHNKL-NESLEYLCHVLKTYSKIRILNLS 355

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNS 341
            N I  +G   L E+L +N+++  L L+     + GA A++  L  G   +++L+L+ N 
Sbjct: 356 GNKIGDNGIIKLMESLEQNTSLSILDLSQTECTSKGAAAISVVLANGVTPIQKLYLNNNK 415

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D+G   L   + +    L  + + NN +  K A  + + +K   ++  I++ MND   
Sbjct: 416 ISDDGGVRLFEAIEN-NTTLVSISLKNNEMKDKTAATLIKILKTNTTIGDIDVTMNDFSY 474

Query: 402 EGAEKIADALKQNRTITTIDLGG 424
               K+A  +++++     ++ G
Sbjct: 475 RSYVKVASLIEEHKKTLNSNIAG 497



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 152 QTLNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           ++L      L+ +S +   ++SG   GD G+  L ESL  N +   +  +    T+ G  
Sbjct: 334 ESLEYLCHVLKTYSKIRILNLSGNKIGDNGIIKLMESLEQNTSLSILDLSQTECTSKGAA 393

Query: 209 AFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           A   VL + +  ++ L L+ N I D+G   L + + +N  +  + L + +++D+ A  + 
Sbjct: 394 AISVVLANGVTPIQKLYLNNNKISDDGGVRLFEAIENNTTLVSISLKNNEMKDKTAATLI 453

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
           ++LK N+ +  +++  N   Y  +  +A  + E+       LN N  G
Sbjct: 454 KILKTNTTIGDIDVTMNDFSYRSYVKVASLIEEHKKT----LNSNIAG 497


>gi|342184616|emb|CCC94098.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 1082

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 203/478 (42%), Gaps = 55/478 (11%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+D+S    GD G  +++E L  N T +E++   N IT  G +      ++N +++
Sbjct: 491 QVVTSLDLSRNTVGDIGATYISEMLMTNSTIKEINLERNSITDRGAQRLCQAFRTNSSVQ 550

Query: 222 TLNLSGNPIGDEGVKCLCDIL----------VDNAGVERLQLSSV----DLRDEGA--KA 265
            LNLS N + D GV    D+L          ++  GV +   + +    DL  E    K 
Sbjct: 551 RLNLSDNALTDAGVTGFVDMLRYNYSLTSISLEKTGVSQATYTKITGAADLNKEAKVLKD 610

Query: 266 IAELLKNNSILRV-LELN----NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           +  +LK+  +    L+L+     +M+D     +L   L     +  L L+GN  G  G  
Sbjct: 611 VVYMLKSGDVKNPRLDLSRKNCTSMLDDRSVATLCSQLCGVPYVSELVLSGNNIGCEGCK 670

Query: 321 ALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           ++   L  + S +R + L GN I D+G+  +  GL S    L  L++ N  +++ G   +
Sbjct: 671 SIGTLLSHDGSGIRHIDLSGNPIDDKGLYEISKGLLSANCVLESLNLSNTEVTSDGITEL 730

Query: 380 AEYIKNCKSL--LWI-------------NLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            E +K   +L  +W                 M +   +  + +  ++K N  I ++    
Sbjct: 731 TEVLKENATLKEVWAPESVSSDSFCLMNQELMVNAQPQSLKPLLRSVKANEVIPSLIFRD 790

Query: 425 NNIHSKGASA--IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            N     A+   +   + +N  ITSLD++ N +  D A  ++E L    NI  + L + Q
Sbjct: 791 PNCPFTDAACHLLCASIVNNEHITSLDMSRNKLTGDSAPYIAEALSRCPNIKEVDLSFNQ 850

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF----- 537
              +G + + + L  N+ I +L +  N +        N L   +     LK +L      
Sbjct: 851 FDEAGGQHLINCLSVNDNIKVLSVEGNSITSATVQKINELLHLNRGSIELKRILLNHRAG 910

Query: 538 ----YSLCINYLQGA-KCLAQSFKVVNEALT------SIDLAFNEIRDDGAFAIAQAL 584
                S+ +N    A K + +  +++ E L       +IDL  N I D+G   +A  L
Sbjct: 911 RITGPSINLNSKGKAYKLMDEDVRILCEVLMGSTSVRAIDLGMNMITDEGCQMLADVL 968



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 122/534 (22%), Positives = 209/534 (39%), Gaps = 89/534 (16%)

Query: 167 VDMSGRNFGDEGL--FFLAESLGYNQTAEEVSFAAN-GITAAGIKAFDGVL-QSNIALKT 222
           VD+S  +  D G+  F    +L +      VSF+ N  I+  G++    +L   N  + T
Sbjct: 202 VDLSDNDISDSGVSQFIDYANLLHCSAITSVSFSKNIRISNYGMQRISNMLFNVNDTITT 261

Query: 223 LNLSGNPIG-------------DEGVKCL----CDILVDNAGVERLQLSSVDLRDEGAKA 265
            ++S   +              ++   CL      I  D+     + L    L  + A+ 
Sbjct: 262 FDVSDTSVTSSVRELIAHECELNKEPSCLKRAVVSIRTDDPSCNIVNLQWEGLSKKAARF 321

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IA  LK+N+++  L L N      G   L  AL +N T+R L L  N   + GA  L  G
Sbjct: 322 IAPTLKHNTMMIELNLGNTSAGDRGVELLTTALQQNRTLRILGLANNGITSNGAKTLFTG 381

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L     L EL+L  N I DE    +++ L      + VL++ NN +S      +   +  
Sbjct: 382 LLQQGFLEELNLANNRIDDEAATTILNTLQ-LNPTIKVLNMINNFLSRDCMDQIEGLVFL 440

Query: 386 CKSLLWINLYMNDI---------------------GDEGAEKIADALKQNRTITTIDLGG 424
            ++   I   +NDI                      D     +   L  N+ +T++DL  
Sbjct: 441 NQAPKAIRTIVNDIENRPSSVTEIVLSGNTEEFFCNDASVRLLCHVLVMNQVVTSLDLSR 500

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N +   GA+ I+ +L  NS I  ++L  N I   GA+ L +  + + ++  L L    + 
Sbjct: 501 NTVGDIGATYISEMLMTNSTIKEINLERNSITDRGAQRLCQAFRTNSSVQRLNLSDNALT 560

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY------ 538
            +G     DMLRYN +++ + L   G+     +   G +  +     LK +++       
Sbjct: 561 DAGVTGFVDMLRYNYSLTSISLEKTGVSQATYTKITGAADLNKEAKVLKDVVYMLKSGDV 620

Query: 539 ----------------------SLC-----INYL------------QGAKCLAQSFKVVN 559
                                 +LC     + Y+            +G K +        
Sbjct: 621 KNPRLDLSRKNCTSMLDDRSVATLCSQLCGVPYVSELVLSGNNIGCEGCKSIGTLLSHDG 680

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             +  IDL+ N I D G + I++ L +  +  + SLNL+N  +T  G + LT+ 
Sbjct: 681 SGIRHIDLSGNPIDDKGLYEISKGLLS-ANCVLESLNLSNTEVTSDGITELTEV 733



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 183/412 (44%), Gaps = 48/412 (11%)

Query: 165  SSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD-GVLQSNIALKT 222
            S + +SG N G EG   +   L ++ +    +  + N I   G+     G+L +N  L++
Sbjct: 655  SELVLSGNNIGCEGCKSIGTLLSHDGSGIRHIDLSGNPIDDKGLYEISKGLLSANCVLES 714

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERL---------------QLSSVDLRDEGAKAIA 267
            LNLS   +  +G+  L ++L +NA ++ +               Q   V+ + +  K + 
Sbjct: 715  LNLSNTEVTSDGITELTEVLKENATLKEVWAPESVSSDSFCLMNQELMVNAQPQSLKPLL 774

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTS--LAEALLENSTIRSLHLNGNYGGALGANALAKG 325
              +K N ++  L   +    ++      L  +++ N  I SL ++ N      A  +A+ 
Sbjct: 775  RSVKANEVIPSLIFRDPNCPFTDAACHLLCASIVNNEHITSLDMSRNKLTGDSAPYIAEA 834

Query: 326  LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA------------ 373
            L    +++E+ L  N   + G + L++ LS     + VL +  NSI++            
Sbjct: 835  LSRCPNIKEVDLSFNQFDEAGGQHLINCLSVNDN-IKVLSVEGNSITSATVQKINELLHL 893

Query: 374  -KGAFHVAEYIKNCKS--LLWINLYMNDIG------DEGAEKIADALKQNRTITTIDLGG 424
             +G+  +   + N ++  +   ++ +N  G      DE    + + L  + ++  IDLG 
Sbjct: 894  NRGSIELKRILLNHRAGRITGPSINLNSKGKAYKLMDEDVRILCEVLMGSTSVRAIDLGM 953

Query: 425  NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
            N I  +G   +A VL  +S I +L L YNPIGA G + L +VLK + +++TL L    + 
Sbjct: 954  NMITDEGCQMLADVLYQSSCIQALYLDYNPIGAAGGEILYDVLKVNHHVHTLLLEGTNVP 1013

Query: 485  ASGAEFVADMLRYNNTISI--LDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
                E +  +L  N T +   +D+R   L D      N  + F S  Y+L  
Sbjct: 1014 EEIWEEILSLLHVNKTPAHERIDMRNVRLED-----VNDDTQFKSTSYTLSQ 1060



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 174/426 (40%), Gaps = 72/426 (16%)

Query: 225 LSGNP----IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           LSGN       D  V+ LC +LV N  V  L LS   + D GA  I+E+L  NS ++ + 
Sbjct: 466 LSGNTEEFFCNDASVRLLCHVLVMNQVVTSLDLSRNTVGDIGATYISEMLMTNSTIKEIN 525

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I   G   L +A   NS+++ L+L+ N     G       L  N SL  + L   
Sbjct: 526 LERNSITDRGAQRLCQAFRTNSSVQRLNLSDNALTDAGVTGFVDMLRYNYSLTSISLEKT 585

Query: 341 SIGDEGIRALMSGLSSRKGKLAVL----------DIGNNSISAKGAFHVAEYIKNCKSLL 390
            +  +     ++G +    +  VL          D+ N  +            KNC S+L
Sbjct: 586 GVS-QATYTKITGAADLNKEAKVLKDVVYMLKSGDVKNPRLDLSR--------KNCTSML 636

Query: 391 -------------------WINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSK 430
                               + L  N+IG EG + I   L  + + I  IDL GN I  K
Sbjct: 637 DDRSVATLCSQLCGVPYVSELVLSGNNIGCEGCKSIGTLLSHDGSGIRHIDLSGNPIDDK 696

Query: 431 GASAIAR-VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           G   I++ +L  N V+ SL+L+   + +DG   L+EVLK +    TLK  W     S   
Sbjct: 697 GLYEISKGLLSANCVLESLNLSNTEVTSDGITELTEVLKENA---TLKEVWAPESVSSDS 753

Query: 490 F--VADMLRYNNTISIL-----DLRANGL------RDEVCSGCNG-LSFFHSAIYSLKHM 535
           F  +   L  N     L      ++AN +      RD  C   +       ++I + +H+
Sbjct: 754 FCLMNQELMVNAQPQSLKPLLRSVKANEVIPSLIFRDPNCPFTDAACHLLCASIVNNEHI 813

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALT------SIDLAFNEIRDDGAFAIAQALKANED 589
               +  N L G      S   + EAL+       +DL+FN+  + G   +   L  N++
Sbjct: 814 TSLDMSRNKLTG-----DSAPYIAEALSRCPNIKEVDLSFNQFDEAGGQHLINCLSVNDN 868

Query: 590 VAVTSL 595
           + V S+
Sbjct: 869 IKVLSV 874



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 171/400 (42%), Gaps = 55/400 (13%)

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA--LLEN 301
           D   ++ L LS     D GA AI +LLK +++  V +L++N I  SG +   +   LL  
Sbjct: 168 DTGSLKSLILSGCSTGDAGAAAIGDLLKGSTVNHV-DLSDNDISDSGVSQFIDYANLLHC 226

Query: 302 STIRSLHLN-----GNYGGALGANAL-----------AKGLEGNKSLRELHLHGNSIGDE 345
           S I S+  +      NYG    +N L                   S+REL  H   +  E
Sbjct: 227 SAITSVSFSKNIRISNYGMQRISNMLFNVNDTITTFDVSDTSVTSSVRELIAHECELNKE 286

Query: 346 GI---RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
                RA++S + +      ++++    +S K A  +A  +K+   ++ +NL     GD 
Sbjct: 287 PSCLKRAVVS-IRTDDPSCNIVNLQWEGLSKKAARFIAPTLKHNTMMIELNLGNTSAGDR 345

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G E +  AL+QNRT+  + L  N I S GA  +   L     +  L+LA N I  + A  
Sbjct: 346 GVELLTTALQQNRTLRILGLANNGITSNGAKTLFTGLLQQGFLEELNLANNRIDDEAATT 405

Query: 463 LSEVLKFHGNINTLKL------GWCQIGASGAEFVADMLRYNNTI-SILDLRANGLRDEV 515
           +   L+ +  I  L +        C     G  F+    +   TI + ++ R + + + V
Sbjct: 406 ILNTLQLNPTIKVLNMINNFLSRDCMDQIEGLVFLNQAPKAIRTIVNDIENRPSSVTEIV 465

Query: 516 CSGCNGLSFF--HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
            SG N   FF   +++  L H+L                    V+N+ +TS+DL+ N + 
Sbjct: 466 LSG-NTEEFFCNDASVRLLCHVL--------------------VMNQVVTSLDLSRNTVG 504

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D GA  I++ L  N    +  +NL  N +T  G   L  A
Sbjct: 505 DIGATYISEMLMTNS--TIKEINLERNSITDRGAQRLCQA 542



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 167/413 (40%), Gaps = 52/413 (12%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           S + ++ LN+S N I   G   L   L    GV+ + +    + D GAK    L   ++ 
Sbjct: 44  SPVPIEVLNISNNEITSAGAAMLYSFLKKTPGVKEIHIGGNMIDDAGAKKFISLFAQSNH 103

Query: 276 LRVLELNNNMIDYSGFTSLA-------------EALLENSTIRSLHLNGNYGGALGANAL 322
               ++N+N    +   +LA             EALL       L ++G     L     
Sbjct: 104 PSAFDINDNKCSPTIVKNLALLAKGDQFTEKIREALLAGQA-EILDVSGLDFNKLDPRLF 162

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
              ++   SL+ L L G S GD G  A+   L  +   +  +D+ +N IS  G     +Y
Sbjct: 163 TFFIKDTGSLKSLILSGCSTGDAGAAAIGDLL--KGSTVNHVDLSDNDISDSGVSQFIDY 220

Query: 383 --IKNCKSLLWINLYMN-DIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARV 438
             + +C ++  ++   N  I + G ++I++ L   N TITT D+   ++ S     IA  
Sbjct: 221 ANLLHCSAITSVSFSKNIRISNYGMQRISNMLFNVNDTITTFDVSDTSVTSSVRELIAHE 280

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            + N   + L  A   I  D               N + L W  +    A F+A  L++N
Sbjct: 281 CELNKEPSCLKRAVVSIRTDDPSC-----------NIVNLQWEGLSKKAARFIAPTLKHN 329

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKC-----L 551
             +  L+L          +G  G+    +A+   + +    L  N +   GAK      L
Sbjct: 330 TMMIELNL------GNTSAGDRGVELLTTALQQNRTLRILGLANNGITSNGAKTLFTGLL 383

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            Q F      L  ++LA N I D+ A  I   L+ N  + V  LN+ NNFL++
Sbjct: 384 QQGF------LEELNLANNRIDDEAATTILNTLQLNPTIKV--LNMINNFLSR 428



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 13/187 (6%)

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           G  +GD  +  L++ +      + VL+I NN I++ GA  +  ++K    +  I++  N 
Sbjct: 26  GKQMGDSQLETLITAMELSPVPIEVLNISNNEITSAGAAMLYSFLKKTPGVKEIHIGGNM 85

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS----------- 447
           I D GA+K      Q+   +  D+  N         +A + K +                
Sbjct: 86  IDDAGAKKFISLFAQSNHPSAFDINDNKCSPTIVKNLALLAKGDQFTEKIREALLAGQAE 145

Query: 448 -LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            LD++         +  +  +K  G++ +L L  C  G +GA  + D+L+  +T++ +DL
Sbjct: 146 ILDVSGLDFNKLDPRLFTFFIKDTGSLKSLILSGCSTGDAGAAAIGDLLK-GSTVNHVDL 204

Query: 507 RANGLRD 513
             N + D
Sbjct: 205 SDNDISD 211


>gi|156355996|ref|XP_001623718.1| predicted protein [Nematostella vectensis]
 gi|156210444|gb|EDO31618.1| predicted protein [Nematostella vectensis]
          Length = 401

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 149/316 (47%), Gaps = 36/316 (11%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E++     +   G +A    L  N  + TLN+S N I +EG   +  +L +N  +  L +
Sbjct: 28  EMNLMHYNLGPRGAEAVAVALMQNTKVLTLNISNNDIQEEGAIYISKMLTENFYITELDI 87

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S+ +L+ +GA A++E+L+ NS +  + L+ N         + EA+ +N T++SL+L+ N 
Sbjct: 88  SNNNLQSQGAYAVSEMLRQNSEILEVNLSENKFIEKDVEPIVEAMKDNYTLKSLNLSRNA 147

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              +G   L   L+ N  L  L+L  N I              RKG +A+          
Sbjct: 148 FCEIGGQLLGPALDANVGLEYLNLRWNQI-------------RRKGAVAI---------G 185

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            G  H      NC SL  ++L  N   D+GA+ + +AL  N T+T +D+  N I  +GAS
Sbjct: 186 YGLRH------NC-SLKSLDLSWNGFADDGAKSVGEALALNTTLTELDISSNRISGEGAS 238

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           +IA  L  N  +  L +  NP  + GA+ +   +  + N    +LG+  I  + +EF  D
Sbjct: 239 SIAAGLAKNETLQILRIGINPFLSQGAQDILSAVHQNPNSAIEELGFDDIPVN-SEF-ED 296

Query: 494 MLRYNNTISILDLRAN 509
            L       ++D R N
Sbjct: 297 FLE-----EVMDARPN 307



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 16/247 (6%)

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           ++  +GA  VA  +     +L +N+  NDI +EGA  I+  L +N  IT +D+  NN+ S
Sbjct: 35  NLGPRGAEAVAVALMQNTKVLTLNISNNDIQEEGAIYISKMLTENFYITELDISNNNLQS 94

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL---GWCQIGAS 486
           +GA A++ +L+ NS I  ++L+ N       + + E +K +  + +L L    +C+I   
Sbjct: 95  QGAYAVSEMLRQNSEILEVNLSENKFIEKDVEPIVEAMKDNYTLKSLNLSRNAFCEI--- 151

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL- 545
           G + +   L  N  +  L+LR N +R +      G    H+   SLK +    L  N   
Sbjct: 152 GGQLLGPALDANVGLEYLNLRWNQIRRKGAVAI-GYGLRHNC--SLKSL---DLSWNGFA 205

Query: 546 -QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
             GAK + ++   +N  LT +D++ N I  +GA +IA  L  NE + +  + + N FL++
Sbjct: 206 DDGAKSVGEAL-ALNTTLTELDISSNRISGEGASSIAAGLAKNETLQILRIGI-NPFLSQ 263

Query: 605 FGQSALT 611
             Q  L+
Sbjct: 264 GAQDILS 270



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 25/245 (10%)

Query: 382 YIKNCKSLLWI--------------NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           Y+K C SL  +              NL   ++G  GAE +A AL QN  + T+++  N+I
Sbjct: 5   YLKACSSLGLVPCSPFLRQLHKPEMNLMHYNLGPRGAEAVAVALMQNTKVLTLNISNNDI 64

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             +GA  I+++L +N  IT LD++ N + + GA A+SE+L+ +  I  + L   +     
Sbjct: 65  QEEGAIYISKMLTENFYITELDISNNNLQSQGAYAVSEMLRQNSEILEVNLSENKFIEKD 124

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCN-GLSFFHSAIYSLKHMLFYSLCINYLQ 546
            E + + ++ N T+  L+L  N         C  G      A+ +   + + +L  N ++
Sbjct: 125 VEPIVEAMKDNYTLKSLNLSRNAF-------CEIGGQLLGPALDANVGLEYLNLRWNQIR 177

Query: 547 GAKCLAQSFKVV-NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
               +A  + +  N +L S+DL++N   DDGA ++ +AL  N    +T L++++N ++  
Sbjct: 178 RKGAVAIGYGLRHNCSLKSLDLSWNGFADDGAKSVGEALALN--TTLTELDISSNRISGE 235

Query: 606 GQSAL 610
           G S++
Sbjct: 236 GASSI 240



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 1/215 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+S  N   +G + ++E L  N    EV+ + N      ++     ++ N  LK+L
Sbjct: 82  ITELDISNNNLQSQGAYAVSEMLRQNSEILEVNLSENKFIEKDVEPIVEAMKDNYTLKSL 141

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N   + G + L   L  N G+E L L    +R +GA AI   L++N  L+ L+L+ 
Sbjct: 142 NLSRNAFCEIGGQLLGPALDANVGLEYLNLRWNQIRRKGAVAIGYGLRHNCSLKSLDLSW 201

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  S+ EAL  N+T+  L ++ N     GA+++A GL  N++L+ L +  N   
Sbjct: 202 NGFADDGAKSVGEALALNTTLTELDISSNRISGEGASSIAAGLAKNETLQILRIGINPFL 261

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +G + ++S +       A+ ++G + I     F 
Sbjct: 262 SQGAQDILSAVHQNPNS-AIEELGFDDIPVNSEFE 295



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K   +  + + E  K+     S+++S   F + G   L  +L  N   E ++   N I  
Sbjct: 119 KFIEKDVEPIVEAMKDNYTLKSLNLSRNAFCEIGGQLLGPALDANVGLEYLNLRWNQIRR 178

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G  A    L+ N +LK+L+LS N   D+G K + + L  N  +  L +SS  +  EGA 
Sbjct: 179 KGAVAIGYGLRHNCSLKSLDLSWNGFADDGAKSVGEALALNTTLTELDISSNRISGEGAS 238

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           +IA  L  N  L++L +  N     G   +  A+ +N
Sbjct: 239 SIAAGLAKNETLQILRIGINPFLSQGAQDILSAVHQN 275


>gi|343962255|dbj|BAK62715.1| hypothetical protein [Pan troglodytes]
          Length = 471

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 164 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 214

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 215 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 315 LRVLKLFLNPI 325



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N    + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 326 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 376



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 211 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNPA-VTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 151

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + I +++L GN+     A+ + + L  N  I  LDL++N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 211

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NG  +
Sbjct: 212 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 271

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 272 EVA-------------LALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRV 317

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 318 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|440911068|gb|ELR60794.1| hypothetical protein M91_01512, partial [Bos grunniens mutus]
          Length = 478

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 28/275 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++   +G+   G KA    L SN  + TL L+ N I +EG+  L ++L +N  +
Sbjct: 87  NMEESYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + + +S  DL  EGA+ ++E L+NN+                           S++ SL 
Sbjct: 147 QEMNVSDNDLGLEGARILSEFLQNNT---------------------------SSLFSLQ 179

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A    + L  N  ++ L L  N   D+    L   L+   G L  LD+  
Sbjct: 180 LSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVG-LQSLDLSW 238

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N +  +G   +   +++  SL  ++L MN  G+EGA  + + L+ N  +T +DL  NNI 
Sbjct: 239 NHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYLTYLDLSSNNIT 298

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           + G S I+R L+ N  +  L L  NPI  DGA  L
Sbjct: 299 NDGLSKISRALELNESLKVLKLFLNPISMDGAVLL 333



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 148/299 (49%), Gaps = 5/299 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T   +  A N I   GI +   +LQ N  L+ +N
Sbjct: 91  SYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + L + L +N + +  LQLS  + ++E A+   + L NN  ++ L+L++
Sbjct: 151 VSDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N         L + L  N  ++SL L+ N+    G  AL  GL  N SL++L L  NS G
Sbjct: 211 NKFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+ +N+I+  G   ++  ++  +SL  + L++N I  +G
Sbjct: 271 NEGAAALGEVL-RLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDG 329

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPIGADGAK 461
           A  +  ++K+N      D+  +N+    +    ++L     I   LD+ Y  + A  AK
Sbjct: 330 AVLLILSIKRNPKSRMEDIDISNVLV--SEQFVKILDGVCAIHPQLDVIYKSVQAPSAK 386



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 41/320 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I +EGI +L+  L      L  +++
Sbjct: 93  INLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENY-YLQEMNV 151

Query: 367 GNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E+++N   SL  + L  N+  +E AE    AL  N  I ++DL  N
Sbjct: 152 SDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               K    + ++L  N  + SLDL++N +   G  AL   L+ + ++  L L     G 
Sbjct: 212 KFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N+ ++ LDL +N + ++      GLS    A+                
Sbjct: 272 EGAAALGEVLRLNSYLTYLDLSSNNITND------GLSKISRALE--------------- 310

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANN 600
                       +NE+L  + L  N I  DGA  +  ++K N     ED+ ++++ ++  
Sbjct: 311 ------------LNESLKVLKLFLNPISMDGAVLLILSIKRNPKSRMEDIDISNVLVSEQ 358

Query: 601 FLTKF-GQSALTDAKDLVYE 619
           F+    G  A+    D++Y+
Sbjct: 359 FVKILDGVCAIHPQLDVIYK 378



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + LN++ +  +G  ++A AL+ N+T+ +L L  N     G  +L + L+ N  L+E+++ 
Sbjct: 93  INLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYLQEMNVS 152

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G EG R L   L +    L  L +  N+   + A    + + N   +  ++L  N 
Sbjct: 153 DNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNK 212

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             D+  E +   L  N  + ++DL  N+++ +G  A+   L+ N  +  LDL+ N  G +
Sbjct: 213 FCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNE 272

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           GA AL EVL+ +  +  L L    I   G   ++  L  N ++ +L L  N +
Sbjct: 273 GAAALGEVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPI 325



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 41/255 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   +INL  + +G  G + IA AL  N T+ T++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEV----------LKFHGN------------ 472
           +  +L++N  +  ++++ N +G +GA+ LSE           L+  GN            
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQ 195

Query: 473 -------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSF 524
                  I +L L   +      E++  ML  N  +  LDL  N L    V + CNGL  
Sbjct: 196 ALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGL-- 253

Query: 525 FHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
              +  SLK +    L +N    +GA  L +  + +N  LT +DL+ N I +DG   I++
Sbjct: 254 --RSNVSLKKL---DLSMNSFGNEGAAALGEVLR-LNSYLTYLDLSSNNITNDGLSKISR 307

Query: 583 ALKANEDVAVTSLNL 597
           AL+ NE + V  L L
Sbjct: 308 ALELNESLKVLKLFL 322



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 2/228 (0%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + L+EF +    +  S+ +SG NF +E      ++L  N   + +  + N       
Sbjct: 159 EGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L++L+LS N +   GV  LC+ L  N  +++L LS     +EGA A+ 
Sbjct: 219 EYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+L+ NS L  L+L++N I   G + ++ AL  N +++ L L  N     GA  L   ++
Sbjct: 279 EVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGAVLLILSIK 338

Query: 328 GNKSLRELHLH-GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            N   R   +   N +  E    ++ G+ +   +L V+     + SAK
Sbjct: 339 RNPKSRMEDIDISNVLVSEQFVKILDGVCAIHPQLDVIYKSVQAPSAK 386


>gi|397474930|ref|XP_003808908.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Pan paniscus]
          Length = 471

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 164 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 214

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 215 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 315 LRVLKLFLNPI 325



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T  ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 211 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 93  MNLNHHGLGPRGTKAIAIALVSNP-TVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 151

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + I +++L GN+     A+ + + L  N  I  LDL++N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 211

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NG  +
Sbjct: 212 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 271

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 272 EVA-------------LALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRV 317

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 318 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|326678385|ref|XP_001346239.4| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Danio
            rerio]
          Length = 1080

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 150/282 (53%), Gaps = 9/282 (3%)

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
             +T         VL+S+ +LK LN+S N + D GVK LC  L +   +E L+LS  DL +
Sbjct: 772  NLTDRSCSVLASVLRSDTSLKELNMSNNNLQDSGVKLLCAGLKEKCDLELLRLSKCDLTE 831

Query: 261  EGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            E   A+A +L+ ++S L+ L+L+NN +  SG   L++ L E S +  L L+         
Sbjct: 832  ESCSALALVLRSDSSSLKDLDLSNNNLQDSGVKRLSDVLKE-SKLEKLGLSKCDLTEESC 890

Query: 320  NALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +ALA  L  +  SL++L L  N++ D G++ L   L  +  KL  L +    ++ +    
Sbjct: 891  SALASVLRSDSSSLKDLDLSNNNLQDSGVKLLSDEL--KDSKLEKLRLSKCDLTEESCSA 948

Query: 379  VAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  ++ +  SL  ++L  N++ D G ++++D LK ++ +  +   G +I  +G  A+A 
Sbjct: 949  LASVLRSDSSSLKDLDLSNNNLQDSGVKRLSDGLKDSK-LEILGFLGCSITEEGYKALAS 1007

Query: 438  VLKDN-SVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLK 477
             LK N S +  LDL  N  G  G K L+++L+  H  + TL+
Sbjct: 1008 ALKSNPSHLIELDLRGNDPGQSGVKELTDLLQDPHCTLKTLR 1049



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 22/284 (7%)

Query: 340  NSIGDEG-IRALMSGLSSRKGKLAVLDIG------NNSISAKGAFHVAEYIKNCKSLLWI 392
            N + D+  ++ + S LS  KG L+  D+       + +++ +    +A  +++  SL  +
Sbjct: 737  NELNDQTLVKEIQSHLS--KGSLSSADLSPAQWLNDCNLTDRSCSVLASVLRSDTSLKEL 794

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLA 451
            N+  N++ D G + +   LK+   +  + L   ++  +  SA+A VL+ D+S +  LDL+
Sbjct: 795  NMSNNNLQDSGVKLLCAGLKEKCDLELLRLSKCDLTEESCSALALVLRSDSSSLKDLDLS 854

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANG 510
             N +   G K LS+VLK    +  L L  C +       +A +LR +++ +  LDL  N 
Sbjct: 855  NNNLQDSGVKRLSDVLK-ESKLEKLGLSKCDLTEESCSALASVLRSDSSSLKDLDLSNNN 913

Query: 511  LRDEVCSGCNGLSFFHSAIYSLK-HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF 569
            L+D      +G+      +   K   L  S C    +    LA   +  + +L  +DL+ 
Sbjct: 914  LQD------SGVKLLSDELKDSKLEKLRLSKCDLTEESCSALASVLRSDSSSLKDLDLSN 967

Query: 570  NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            N ++D G   ++  LK   D  +  L      +T+ G  AL  A
Sbjct: 968  NNLQDSGVKRLSDGLK---DSKLEILGFLGCSITEEGYKALASA 1008


>gi|145348360|ref|XP_001418618.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578848|gb|ABO96911.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 241

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 3/229 (1%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLE 300
           L D   +++L LS+  L     + IA +L  N   L  L+L  N I   G  +LA AL +
Sbjct: 4   LTDARSLKKLDLSACGLSASAGERIAAVLDENGCPLERLDLRGNAIGAEGTLALASALRK 63

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS-GLSSRKG 359
             T++SL+L  N  G  G  ALA  L G  S+ EL +  N  GDEG  AL + G  SR  
Sbjct: 64  TKTLKSLNLAQNLIGGDGLRALASALAGETSMEELDIQHNGCGDEGCMALATHGFGSRLE 123

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            L +    +N+    GA  +A+ +K+  S L  +NL  N++ D+ A  IADAL +N+T+ 
Sbjct: 124 TLLLDLDLSNNSVRDGAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENKTLK 183

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           T++LG N      AS IA  L++N  + +LDL  N IG +GA  L + +
Sbjct: 184 TLNLGSNAFGDSAASDIASDLRENIALETLDLTRNGIGREGACELMDAM 232



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 104/211 (49%), Gaps = 13/211 (6%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLK 468
           AL   R++  +DL    + +     IA VL +N   +  LDL  N IGA+G  AL+  L+
Sbjct: 3   ALTDARSLKKLDLSACGLSASAGERIAAVLDENGCPLERLDLRGNAIGAEGTLALASALR 62

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF--FH 526
               + +L L    IG  G   +A  L    ++  LD++ NG  DE   GC  L+   F 
Sbjct: 63  KTKTLKSLNLAQNLIGGDGLRALASALAGETSMEELDIQHNGCGDE---GCMALATHGFG 119

Query: 527 SAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           S + +L   L  S   +   GAK LA+S K     L  ++L  NE+ DD A+ IA AL  
Sbjct: 120 SRLETLLLDLDLSN-NSVRDGAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGE 178

Query: 587 NEDVAVTSLNLANNFLTKFGQSALTD-AKDL 616
           N+   + +LNL +N    FG SA +D A DL
Sbjct: 179 NK--TLKTLNLGSN---AFGDSAASDIASDL 204



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E +    N I A G  A    L+    LK+LNL+ N IG +G++ L   L     +E L 
Sbjct: 40  ERLDLRGNAIGAEGTLALASALRKTKTLKSLNLAQNLIGGDGLRALASALAGETSMEELD 99

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +      DEG  A+A                      GF S  E LL +  + +  +   
Sbjct: 100 IQHNGCGDEGCMALA--------------------THGFGSRLETLLLDLDLSNNSVRD- 138

Query: 313 YGGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                GA  LAK L+ G  +L++L+L  N + D+    +   L   K  L  L++G+N+ 
Sbjct: 139 -----GAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENK-TLKTLNLGSNAF 192

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
               A  +A  ++   +L  ++L  N IG EGA ++ DA+ +N T+
Sbjct: 193 GDSAASDIASDLRENIALETLDLTRNGIGREGACELMDAMDENTTL 238



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 5/189 (2%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L GN+IG EG  AL S L   K  L  L++  N I   G   +A  +    S+  
Sbjct: 39  LERLDLRGNAIGAEGTLALASALRKTK-TLKSLNLAQNLIGGDGLRALASALAGETSMEE 97

Query: 392 INLYMNDIGDEGAEKIADALKQNR--TITTIDLGGNNIHSKGASAIARVLKDN-SVITSL 448
           +++  N  GDEG   +A     +R  T+       NN    GA  +A+ LK   S +  L
Sbjct: 98  LDIQHNGCGDEGCMALATHGFGSRLETLLLDLDLSNNSVRDGAKWLAKSLKSGASNLKQL 157

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           +L  N +  D A  +++ L  +  + TL LG    G S A  +A  LR N  +  LDL  
Sbjct: 158 NLQANEMTDDDAWYIADALGENKTLKTLNLGSNAFGDSAASDIASDLRENIALETLDLTR 217

Query: 509 NGL-RDEVC 516
           NG+ R+  C
Sbjct: 218 NGIGREGAC 226



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 31/180 (17%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-------- 210
           ++ +   S++++    G +GL  LA +L    + EE+    NG    G  A         
Sbjct: 62  RKTKTLKSLNLAQNLIGGDGLRALASALAGETSMEELDIQHNGCGDEGCMALATHGFGSR 121

Query: 211 ----------------DGV------LQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAG 247
                           DG       L+S  + LK LNL  N + D+    + D L +N  
Sbjct: 122 LETLLLDLDLSNNSVRDGAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENKT 181

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           ++ L L S    D  A  IA  L+ N  L  L+L  N I   G   L +A+ EN+T+R L
Sbjct: 182 LKTLNLGSNAFGDSAASDIASDLRENIALETLDLTRNGIGREGACELMDAMDENTTLRRL 241



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 8/101 (7%)

Query: 157 FAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN--GITAAGIKAF 210
            AK L++ +S    +++      D+  +++A++LG N+T + ++  +N  G +AA   A 
Sbjct: 143 LAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENKTLKTLNLGSNAFGDSAASDIAS 202

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           D  L+ NIAL+TL+L+ N IG EG   L D + +N  + RL
Sbjct: 203 D--LRENIALETLDLTRNGIGREGACELMDAMDENTTLRRL 241



 Score = 45.8 bits (107), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 36/261 (13%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL++L L    +       + + L      L  LD+  N+I A+G   +A  ++  K+L
Sbjct: 8   RSLKKLDLSACGLSASAGERIAAVLDENGCPLERLDLRGNAIGAEGTLALASALRKTKTL 67

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +NL  N IG +G   +A AL    ++  +D+  N    +G  A+A     + + T L 
Sbjct: 68  KSLNLAQNLIGGDGLRALASALAGETSMEELDIQHNGCGDEGCMALATHGFGSRLETLLL 127

Query: 450 LAYNPIGA--DGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
                  +  DGAK L++ LK    N+  L L   ++    A ++AD L  N T+  L+L
Sbjct: 128 DLDLSNNSVRDGAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENKTLKTLNL 187

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSID 566
            +N             +F  SA   +   L                      N AL ++D
Sbjct: 188 GSN-------------AFGDSAASDIASDLRE--------------------NIALETLD 214

Query: 567 LAFNEIRDDGAFAIAQALKAN 587
           L  N I  +GA  +  A+  N
Sbjct: 215 LTRNGIGREGACELMDAMDEN 235


>gi|92098299|gb|AAI15271.1| Zgc:136791 [Danio rerio]
          Length = 399

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 10/290 (3%)

Query: 201 GITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDL 258
           GI+  G  A    L+SN + L+ L+LS N +GD GVK L   L D +  +E+L+L    +
Sbjct: 106 GISDKGCAALASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCKLEKLRLRCCGV 165

Query: 259 RDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
            DEG   +A +L++NS  LR LEL+ N+        L  A L++   +   L   Y G  
Sbjct: 166 SDEGCADLASVLRSNSSNLRELELSKNINVGDSGVKLLSAGLKDPHCKLEKLRLGYCGVS 225

Query: 318 --GANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             G  ALA  L  N S LREL L  N I D G++ L +GL   + KL  L + N  +S K
Sbjct: 226 DEGCAALASVLRSNSSNLRELDLSDNKIVDSGVKRLSAGLKDPQCKLETLRLINCDVSGK 285

Query: 375 GAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGA 432
           G   +A  ++ N  +L  +NL  N +GD G ++++  LK     +  + L    +     
Sbjct: 286 GCAALASALRSNSSNLRELNLSENKVGDSGVKRLSAGLKDPHCKLEKLTLNYCGVSDASC 345

Query: 433 SAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVL-KFHGNINTLKLGW 480
           + +A  L+ NS  +  L+L +N +   G K LS++    H  + TL + W
Sbjct: 346 ADLASALRSNSSNLRELNLKWNRVEGIGVKWLSDLRDDPHYKLETLHISW 395



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 49/302 (16%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN--CKSLLWINLYMNDI 399
           I D+G  AL S L S    L  LD+  N +   G   ++  +K+  CK L  + L    +
Sbjct: 107 ISDKGCAALASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCK-LEKLRLRCCGV 165

Query: 400 GDEGAEKIADALKQNRT-------------------------------ITTIDLGGNNIH 428
            DEG   +A  L+ N +                               +  + LG   + 
Sbjct: 166 SDEGCADLASVLRSNSSNLRELELSKNINVGDSGVKLLSAGLKDPHCKLEKLRLGYCGVS 225

Query: 429 SKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGAS 486
            +G +A+A VL+ NS  +  LDL+ N I   G K LS  LK     + TL+L  C +   
Sbjct: 226 DEGCAALASVLRSNSSNLRELDLSDNKIVDSGVKRLSAGLKDPQCKLETLRLINCDVSGK 285

Query: 487 GAEFVADMLRYNNT-ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY- 544
           G   +A  LR N++ +  L+L  N + D   SG   L    SA     H     L +NY 
Sbjct: 286 GCAALASALRSNSSNLRELNLSENKVGD---SGVKRL----SAGLKDPHCKLEKLTLNYC 338

Query: 545 -LQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
            +  A C  LA + +  +  L  ++L +N +   G   ++  L+ +    + +L+++  F
Sbjct: 339 GVSDASCADLASALRSNSSNLRELNLKWNRVEGIGVKWLSD-LRDDPHYKLETLHISWGF 397

Query: 602 LT 603
           + 
Sbjct: 398 IC 399


>gi|29838763|gb|AAN52939.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 727 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 786

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 787 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 842

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 843 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 902

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 903 KWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 4/218 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           + L+   ++ +   + GD G+  L   LG       +    N I+  G +          
Sbjct: 760 QHLQRPVALQLDYNSVGDVGVEQLRPCLG---VCTALYLRDNNISDRGARTLVECALRCE 816

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L+ L L  N + D     +  +L        L++ +  +   GA+ +A+ LK+N+ L+ 
Sbjct: 817 QLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKF 876

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L    N +   G  +LAE + ++  ++ L L GN  G++GA ALA  LE NKSL EL L 
Sbjct: 877 LGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLE 936

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            N I DEG+ +L  GL  R   L  L + NN I+ +GA
Sbjct: 937 ENHICDEGVYSLAEGL-KRNSTLKFLKLSNNGITYRGA 973



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|29838679|gb|AAN52483.1| NOD2 [Mus musculus castaneus]
          Length = 1013

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLKALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL K L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 727 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 786

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 787 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 842

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 843 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 902

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 903 KWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           +L L+ N  G +G   L   L    +L   +L  N+I D G R L+   + R  +L  L 
Sbjct: 767 ALQLDYNSVGDVGVEQLRPCLGVCTAL---YLRDNNISDRGARTLVE-CALRCEQLQKLA 822

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + NN ++   A  +A+ + + ++ L + +  N I   GAE +A  LK N ++  +   GN
Sbjct: 823 LFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGN 882

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           ++  KG  A+A V+ D+  +  L L  N IG+ GA+AL+ +L+ + ++  L L    I  
Sbjct: 883 SVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICD 942

Query: 486 SGAEFVADMLRYNNTISILDLRANGL 511
            G   +A+ L+ N+T+  L L  NG+
Sbjct: 943 EGVYSLAEGLKRNSTLKFLKLSNNGI 968



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSAILEVWLRGN 994


>gi|29838691|gb|AAN52484.1| NOD2 [Mus musculus castaneus]
          Length = 1013

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLKALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL K L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 727 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 786

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 787 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 842

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 843 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 902

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 903 KWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           +L L+ N  G +G   L   L    +L   +L  N+I D G R L+   + R  +L  L 
Sbjct: 767 ALQLDYNSVGDVGVEQLRPCLGVCTAL---YLRDNNISDRGARTLVE-CALRCEQLQKLA 822

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + NN ++   A  +A+ + + ++ L + +  N I   GAE +A  LK N ++  +   GN
Sbjct: 823 LFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGN 882

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           ++  KG  A+A V+ D+  +  L L  N IG+ GA+AL+ +L+ + ++  L L    I  
Sbjct: 883 SVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICD 942

Query: 486 SGAEFVADMLRYNNTISILDLRANGL 511
            G   +A+ L+ N+T+  L L  NG+
Sbjct: 943 EGVYSLAEGLKRNSTLKFLKLSNNGI 968



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSAILEVWLRGN 994


>gi|168026804|ref|XP_001765921.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682827|gb|EDQ69242.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 540

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 30/307 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+++S    G++G+   +  LG   + E +SF  NGI+    +A   +L S+  L+TL
Sbjct: 215 LKSLNLSDNALGEKGVRAFSALLGSQNSLEALSFMNNGISVDAARAIREILPSSKELRTL 274

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
               N  GDEG   L   +V  A + E  Q SS  +  EG  A+ E L+    L+++++ 
Sbjct: 275 RFHNNMTGDEGALELATEVVGGAPLLEHFQFSSSRVGSEGGVALMEALQAGKSLKIIDIR 334

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +NM                         G  GGA    ALA  L  +  L+E++L    +
Sbjct: 335 DNMY------------------------GPEGGA----ALALALRSHTMLKEVYLSDLGL 366

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            DEG  A++  L+    ++ +L++G N I+ K A  +A  I++ + L  +NL  N++ D 
Sbjct: 367 EDEGALAVVKALTEASSQVTILELGGNEITEKVAPALATCIRSMRHLTRLNLMENELKDS 426

Query: 403 GAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           G   ++ A+ +    +  +DL  N +   GA A A+ + +      L+L  N I   G +
Sbjct: 427 GVVTVSTAIGEGLENLRELDLSVNELSRIGALAAAQAVGNKKHFKHLNLNGNQISEQGVE 486

Query: 462 ALSEVLK 468
           A+ E+L+
Sbjct: 487 AVQEMLR 493



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 141/297 (47%), Gaps = 14/297 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           + ++  LEG+K L+ L+L  N++G++G+RA  S L   +  L  L   NN IS   A  +
Sbjct: 204 STISSALEGSK-LKSLNLSDNALGEKGVRAF-SALLGSQNSLEALSFMNNGISVDAARAI 261

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIA-DALKQNRTITTIDLGGNNIHSKGASAIARV 438
            E + + K L  +  + N  GDEGA ++A + +     +       + + S+G  A+   
Sbjct: 262 REILPSSKELRTLRFHNNMTGDEGALELATEVVGGAPLLEHFQFSSSRVGSEGGVALMEA 321

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-RY 497
           L+    +  +D+  N  G +G  AL+  L+ H  +  + L    +   GA  V   L   
Sbjct: 322 LQAGKSLKIIDIRDNMYGPEGGAALALALRSHTMLKEVYLSDLGLEDEGALAVVKALTEA 381

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV 557
           ++ ++IL+L  N + ++V           + I S++H+   +L  N L+ +  +  S  +
Sbjct: 382 SSQVTILELGGNEITEKVAPA------LATCIRSMRHLTRLNLMENELKDSGVVTVSTAI 435

Query: 558 VN--EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
               E L  +DL+ NE+   GA A AQA+   +      LNL  N +++ G  A+ +
Sbjct: 436 GEGLENLRELDLSVNELSRIGALAAAQAVGNKKH--FKHLNLNGNQISEQGVEAVQE 490



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 118/283 (41%), Gaps = 62/283 (21%)

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S L+ L L++N +   G  + +  L   +++ +L    N      A A+ + L  +K LR
Sbjct: 213 SKLKSLNLSDNALGEKGVRAFSALLGSQNSLEALSFMNNGISVDAARAIREILPSSKELR 272

Query: 334 ELHLHGNSIGDEGIRALMSGL-------------SSRKG---------------KLAVLD 365
            L  H N  GDEG   L + +             SSR G                L ++D
Sbjct: 273 TLRFHNNMTGDEGALELATEVVGGAPLLEHFQFSSSRVGSEGGVALMEALQAGKSLKIID 332

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG--DEGAEKIADALKQ-NRTITTIDL 422
           I +N    +G   +A  +++   L  +  Y++D+G  DEGA  +  AL + +  +T ++L
Sbjct: 333 IRDNMYGPEGGAALALALRSHTMLKEV--YLSDLGLEDEGALAVVKALTEASSQVTILEL 390

Query: 423 GGNNIHSKGASAIARV----------------LKDNSVIT-------------SLDLAYN 453
           GGN I  K A A+A                  LKD+ V+T              LDL+ N
Sbjct: 391 GGNEITEKVAPALATCIRSMRHLTRLNLMENELKDSGVVTVSTAIGEGLENLRELDLSVN 450

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            +   GA A ++ +    +   L L   QI   G E V +MLR
Sbjct: 451 ELSRIGALAAAQAVGNKKHFKHLNLNGNQISEQGVEAVQEMLR 493


>gi|290998894|ref|XP_002682015.1| predicted protein [Naegleria gruberi]
 gi|284095641|gb|EFC49271.1| predicted protein [Naegleria gruberi]
          Length = 413

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 41/310 (13%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F  E++  +S+D+     G EG+ +++E     +    ++ +   I+  G K    + Q 
Sbjct: 128 FISEMKQLTSLDIYSNRIGVEGVKYISEM----KQLTSLNISEIEISDEGAKYISEMKQ- 182

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L +L +  N IGDEG K + ++      +  L +   ++ DEGAK I+E+   N ++
Sbjct: 183 ---LTSLYIHNNEIGDEGSKHISEM----KQLTSLNIGCNEISDEGAKHISEM---NQLI 232

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L +  N I   GF  ++E       + SL +  +  G  GA  +++     K L  L+
Sbjct: 233 S-LSIGYNRIGDEGFKYISEM----KQLTSLDITDDEIGDEGAKYISEM----KQLTSLN 283

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +  N IGDEG + +     S   +L  LDI    IS +G    A+YI   K L+W+ +  
Sbjct: 284 IGFNEIGDEGAKYI-----SELKQLTSLDISETEISDEG----AKYISEMKQLIWLTIGY 334

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N+I D+GA+ I++ LKQ   +T++D+  N I ++GA  I+ +   N +I SL++ YN IG
Sbjct: 335 NEISDKGAKYISE-LKQ---LTSLDITDNKIGNEGAKYISEM---NQLI-SLNIGYNRIG 386

Query: 457 ADGAKALSEV 466
            +GAK +SE+
Sbjct: 387 DEGAKYISEM 396



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 53/295 (17%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +L++  N IG EGVK + ++      +  L +S +++ DEGAK I+E+ +    L  L
Sbjct: 135 LTSLDIYSNRIGVEGVKYISEM----KQLTSLNISEIEISDEGAKYISEMKQ----LTSL 186

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            ++NN I   G   ++E       + SL++  N     GA  ++   E N+ L  L +  
Sbjct: 187 YIHNNEIGDEGSKHISEM----KQLTSLNIGCNEISDEGAKHIS---EMNQ-LISLSIGY 238

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG + +     S   +L  LDI ++ I  +GA    +YI   K L  +N+  N+I
Sbjct: 239 NRIGDEGFKYI-----SEMKQLTSLDITDDEIGDEGA----KYISEMKQLTSLNIGFNEI 289

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI--------------------ARVL 439
           GDEGA+ I++ LKQ   +T++D+    I  +GA  I                    A+ +
Sbjct: 290 GDEGAKYISE-LKQ---LTSLDISETEISDEGAKYISEMKQLIWLTIGYNEISDKGAKYI 345

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +   +TSLD+  N IG +GAK +SE+      + +L +G+ +IG  GA+++++M
Sbjct: 346 SELKQLTSLDITDNKIGNEGAKYISEM----NQLISLNIGYNRIGDEGAKYISEM 396



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 155/310 (50%), Gaps = 64/310 (20%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L  L ++ N IG EG++ +     S   +L  L+I    IS +GA    +YI   K L
Sbjct: 133 KQLTSLDIYSNRIGVEGVKYI-----SEMKQLTSLNISEIEISDEGA----KYISEMKQL 183

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA------------- 436
             + ++ N+IGDEG++ I++     + +T++++G N I  +GA  I+             
Sbjct: 184 TSLYIHNNEIGDEGSKHISEM----KQLTSLNIGCNEISDEGAKHISEMNQLISLSIGYN 239

Query: 437 -------RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
                  + + +   +TSLD+  + IG +GAK +SE+      + +L +G+ +IG  GA+
Sbjct: 240 RIGDEGFKYISEMKQLTSLDITDDEIGDEGAKYISEM----KQLTSLNIGFNEIGDEGAK 295

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QG 547
           +++++ +    ++ LD+    + DE      G  +    I  +K +++ ++  N +  +G
Sbjct: 296 YISELKQ----LTSLDISETEISDE------GAKY----ISEMKQLIWLTIGYNEISDKG 341

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           AK +++      + LTS+D+  N+I ++GA  I++  +      + SLN+  N +   G 
Sbjct: 342 AKYISEL-----KQLTSLDITDNKIGNEGAKYISEMNQ------LISLNIGYNRIGDEGA 390

Query: 608 SALTDAKDLV 617
             +++ K L 
Sbjct: 391 KYISEMKQLT 400



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 124/239 (51%), Gaps = 39/239 (16%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +I   K L  +++Y N IG EG + I++     + +T++++    I  +GA  I+ + + 
Sbjct: 128 FISEMKQLTSLDIYSNRIGVEGVKYISEM----KQLTSLNISEIEISDEGAKYISEMKQ- 182

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              +TSL +  N IG +G+K +SE+      + +L +G  +I   GA+ +++M   N  I
Sbjct: 183 ---LTSLYIHNNEIGDEGSKHISEM----KQLTSLNIGCNEISDEGAKHISEM---NQLI 232

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVN 559
           S L +  N + DE      G  +    I  +K +    +  + +  +GAK +++      
Sbjct: 233 S-LSIGYNRIGDE------GFKY----ISEMKQLTSLDITDDEIGDEGAKYISEM----- 276

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 618
           + LTS+++ FNEI D+GA  I++ LK      +TSL+++   ++  G   +++ K L++
Sbjct: 277 KQLTSLNIGFNEIGDEGAKYISE-LK-----QLTSLDISETEISDEGAKYISEMKQLIW 329



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 34/197 (17%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +TSLD+  N IG +G K +SE+      + +L +   +I   GA+++++M +    ++ L
Sbjct: 135 LTSLDIYSNRIGVEGVKYISEM----KQLTSLNISEIEISDEGAKYISEMKQ----LTSL 186

Query: 505 DLRANGLRDE-------------VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
            +  N + DE             +  GCN +S   +   S  + L  SL I Y    +  
Sbjct: 187 YIHNNEIGDEGSKHISEMKQLTSLNIGCNEISDEGAKHISEMNQLI-SLSIGY---NRIG 242

Query: 552 AQSFKVVNE--ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
            + FK ++E   LTS+D+  +EI D+GA  I++  +      +TSLN+  N +   G   
Sbjct: 243 DEGFKYISEMKQLTSLDITDDEIGDEGAKYISEMKQ------LTSLNIGFNEIGDEGAKY 296

Query: 610 LTDAKDLV-YEMSEKEV 625
           +++ K L   ++SE E+
Sbjct: 297 ISELKQLTSLDISETEI 313



 Score = 45.8 bits (107), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 78/238 (32%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           +  E++  +S+D++    GDEG  +++E                                
Sbjct: 248 YISEMKQLTSLDITDDEIGDEGAKYISEMK------------------------------ 277

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L +LN+  N IGDEG K + ++      +  L +S  ++ DEGAK I+E+ +    L
Sbjct: 278 --QLTSLNIGFNEIGDEGAKYISEL----KQLTSLDISETEISDEGAKYISEMKQ----L 327

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L +  N I   G   ++E                                 K L  L 
Sbjct: 328 IWLTIGYNEISDKGAKYISEL--------------------------------KQLTSLD 355

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           +  N IG+EG + +     S   +L  L+IG N I  +GA +++E +K   SL  I+L
Sbjct: 356 ITDNKIGNEGAKYI-----SEMNQLISLNIGYNRIGDEGAKYISE-MKQLTSLRQISL 407


>gi|410048542|ref|XP_003952592.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Pan troglodytes]
          Length = 471

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 164 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 214

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 215 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGL 511
           + +L L  N +
Sbjct: 315 LRVLKLFLNPI 325



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N    + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 326 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 376



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 211 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNPA-VTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 151

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + I +++L GN+     A+ + + L  N  I  LDL++N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 211

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NG  +
Sbjct: 212 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 271

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 272 EVA-------------LALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRV 317

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 318 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|320165120|gb|EFW42019.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 685

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 1/185 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L+L   ++R++  +AIAE LK N+ L+ L+L  N I  +G  ++AEAL  N+T+  L+L+
Sbjct: 19  LELIQQNIREDDVQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYLD 78

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
             + G +GA A+A+ L+ N  L E++L  N IGD G +A+   L      L  L +G N 
Sbjct: 79  ECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKV-NTILTALALGKNH 137

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS  GA  +AE +K  + +  + L  N IGD GA  IA+ LK N+ +  + L  N I   
Sbjct: 138 ISVAGAQAIAEALKVNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRYLSLSNNFITIV 197

Query: 431 GASAI 435
           G +A+
Sbjct: 198 GINAL 202



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 1/177 (0%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L   +I ++ ++A+   L      L  LD+  N I   GA  +AE +K   +L  +
Sbjct: 17  RTLELIQQNIREDDVQAIAEALKVNTS-LKALDLRVNQIGDAGAQAIAEALKVNTTLTHL 75

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L    IG  GA+ IA+ALK N  +T I L  N I   GA AIA  LK N+++T+L L  
Sbjct: 76  YLDECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTALALGK 135

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           N I   GA+A++E LK +  +N ++L   QIG +GA  +A++L+ N  +  L L  N
Sbjct: 136 NHISVAGAQAIAEALKVNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRYLSLSNN 192



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 11/194 (5%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T++L   NI      AIA  LK N+ + +LDL  N IG  GA+A++E LK +  +  L L
Sbjct: 18  TLELIQQNIREDDVQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYL 77

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
             C IG  GA+ +A+ L+ N  ++ + LR N + D            ++ + +L      
Sbjct: 78  DECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTAL------ 131

Query: 539 SLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
           +L  N++   GA+ +A++ K VN  +  + L  N+I D GA AIA+ LK N+ +    L+
Sbjct: 132 ALGKNHISVAGAQAIAEALK-VNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRY--LS 188

Query: 597 LANNFLTKFGQSAL 610
           L+NNF+T  G +AL
Sbjct: 189 LSNNFITIVGINAL 202



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 86/151 (56%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L++   +I       +AE +K   SL  ++L +N IGD GA+ IA+ALK N T+T + L
Sbjct: 18  TLELIQQNIREDDVQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYL 77

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              +I   GA AIA  LK N+V+T + L  N IG  GA+A++E LK +  +  L LG   
Sbjct: 78  DECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTALALGKNH 137

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRD 513
           I  +GA+ +A+ L+ N  ++ + L  N + D
Sbjct: 138 ISVAGAQAIAEALKVNRLVNHVRLNDNQIGD 168



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 98/194 (50%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           + K   A  ++++  +N  ++ +  +AE+L  N + + +    N I  AG +A    L+ 
Sbjct: 9   YDKVKHASRTLELIQQNIREDDVQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKV 68

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L L    IG  G + + + L  N  +  + L    + D GA+AIAE LK N+IL
Sbjct: 69  NTTLTHLYLDECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTIL 128

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I  +G  ++AEAL  N  +  + LN N  G  GA A+A+ L+ NK LR L 
Sbjct: 129 TALALGKNHISVAGAQAIAEALKVNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRYLS 188

Query: 337 LHGNSIGDEGIRAL 350
           L  N I   GI AL
Sbjct: 189 LSNNFITIVGINAL 202



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 1/169 (0%)

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           ++A    L+ N +LK L+L  N IGD G + + + L  N  +  L L    +   GA+AI
Sbjct: 31  VQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYLDECHIGVVGAQAI 90

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE LK N++L  + L +N I  +G  ++AE L  N+ + +L L  N+    GA A+A+ L
Sbjct: 91  AEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTALALGKNHISVAGAQAIAEAL 150

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           + N+ +  + L+ N IGD G  A+   L   K KL  L + NN I+  G
Sbjct: 151 KVNRLVNHVRLNDNQIGDAGALAIAEVLKVNK-KLRYLSLSNNFITIVG 198



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 82/171 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K   +  ++D+     GD G   +AE+L  N T   +      I   G +A  
Sbjct: 32  QAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYLDECHIGVVGAQAIA 91

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  + L  N IGD G + + + L  N  +  L L    +   GA+AIAE LK
Sbjct: 92  EALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTALALGKNHISVAGAQAIAEALK 151

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            N ++  + LN+N I  +G  ++AE L  N  +R L L+ N+   +G NAL
Sbjct: 152 VNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRYLSLSNNFITIVGINAL 202


>gi|334310551|ref|XP_001374437.2| PREDICTED: uncharacterized protein C14orf166B-like [Monodelphis
           domestica]
          Length = 496

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 35/299 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I ++G  +LM  L      +  L++
Sbjct: 126 MNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALSLMQMLHENY-YIQELNV 184

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
             N + +KGA  + +++    S LW I L  ND  D+ A    +AL  N  I  +DL  N
Sbjct: 185 SGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCNALTANYRIKVLDLSHN 244

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               KG   + ++L  N  + +LDL++N +   GA ALS  L+ +  + TL L W   G 
Sbjct: 245 FFSEKGGEQLGQMLAFNEGLQTLDLSWNQLHLKGAVALSNSLRVNITLKTLNLSWNGFGN 304

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA+ + D L+ N T++ LD+ +N +                                Y 
Sbjct: 305 EGAQALGDALKINATLAYLDISSNHI--------------------------------YN 332

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            GA  L +  + +NE L  + ++ N +  DG  A+  ++K N    +  ++++N  +T+
Sbjct: 333 DGAIKLGKGLE-INETLRILKMSQNPVTMDGVLAMVMSVKRNPKSRLEEMDVSNVLVTE 390



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G +G K +   LV N  + RL+L    + ++GA ++ ++L  N  +
Sbjct: 120 NMEETYMNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALSLMQMLHENYYI 179

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L ++ N +D  G   + + L EN S++ S+ L GN      A      L  N  ++ L
Sbjct: 180 QELNVSGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCNALTANYRIKVL 239

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   ++G   L   L+  +G L  LD+  N +  KGA  ++  ++   +L  +NL 
Sbjct: 240 DLSHNFFSEKGGEQLGQMLAFNEG-LQTLDLSWNQLHLKGAVALSNSLRVNITLKTLNLS 298

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N  G+EGA+ + DALK N T+  +D+  N+I++ GA  + + L+ N  +  L ++ NP+
Sbjct: 299 WNGFGNEGAQALGDALKINATLAYLDISSNHIYNDGAIKLGKGLEINETLRILKMSQNPV 358

Query: 456 GADGAKAL 463
             DG  A+
Sbjct: 359 TMDGVLAM 366



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 30/260 (11%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           + L+   L  +G KAIA  L +N+ +  LEL +N I   G  SL + L EN  I+ L+++
Sbjct: 126 MNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALSLMQMLHENYYIQELNVS 185

Query: 311 GNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           GN+  + GA  +   L E   SL  + L GN   D+      + L++   ++ VLD+ +N
Sbjct: 186 GNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCNALTANY-RIKVLDLSHN 244

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
             S KG                             E++   L  N  + T+DL  N +H 
Sbjct: 245 FFSEKGG----------------------------EQLGQMLAFNEGLQTLDLSWNQLHL 276

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           KGA A++  L+ N  + +L+L++N  G +GA+AL + LK +  +  L +    I   GA 
Sbjct: 277 KGAVALSNSLRVNITLKTLNLSWNGFGNEGAQALGDALKINATLAYLDISSNHIYNDGAI 336

Query: 490 FVADMLRYNNTISILDLRAN 509
            +   L  N T+ IL +  N
Sbjct: 337 KLGKGLEINETLRILKMSQN 356



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 18/329 (5%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + ++++    G +G   +A +L  N T   +    N I   G  +   +L  N  ++ LN
Sbjct: 124 TYMNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALSLMQMLHENYYIQELN 183

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +SGN +  +G K + D L +N + +  +QL+  D +D+ A      L  N  ++VL+L++
Sbjct: 184 VSGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCNALTANYRIKVLDLSH 243

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  +++L L+ N     GA AL+  L  N +L+ L+L  N  G
Sbjct: 244 NFFSEKGGEQLGQMLAFNEGLQTLDLSWNQLHLKGAVALSNSLRVNITLKTLNLSWNGFG 303

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG +AL   L      LA LDI +N I   GA  + + ++  ++L  + +  N +  +G
Sbjct: 304 NEGAQALGDALKIN-ATLAYLDISSNHIYNDGAIKLGKGLEINETLRILKMSQNPVTMDG 362

Query: 404 AEKIADALKQNRTITTIDLGGNN----------------IHSKGASAIARVLKDNSVITS 447
              +  ++K+N      ++  +N                +H +       V+   S   S
Sbjct: 363 VLAMVMSVKRNPKSRLEEMDVSNVLVTEGFVKQLEGVFVVHPELDVLYGEVVGTISKTVS 422

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTL 476
           L +A+N I A   K  + +L+F  +IN L
Sbjct: 423 LPVAFNVIKAYVEKNKTNMLEFFKSINHL 451



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 2/218 (0%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
           +L +   E      +++SG +   +G   + + L  N ++   +  A N         F 
Sbjct: 168 SLMQMLHENYYIQELNVSGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFC 227

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L +N  +K L+LS N   ++G + L  +L  N G++ L LS   L  +GA A++  L+
Sbjct: 228 NALTANYRIKVLDLSHNFFSEKGGEQLGQMLAFNEGLQTLDLSWNQLHLKGAVALSNSLR 287

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L+ L L+ N     G  +L +AL  N+T+  L ++ N+    GA  L KGLE N++
Sbjct: 288 VNITLKTLNLSWNGFGNEGAQALGDALKINATLAYLDISSNHIYNDGAIKLGKGLEINET 347

Query: 332 LRELHLHGNSIGDEGIRAL-MSGLSSRKGKLAVLDIGN 368
           LR L +  N +  +G+ A+ MS   + K +L  +D+ N
Sbjct: 348 LRILKMSQNPVTMDGVLAMVMSVKRNPKSRLEEMDVSN 385



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 131/259 (50%), Gaps = 14/259 (5%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G +G + IA AL  N TIT ++L  N I   GA +
Sbjct: 110 GVIPVSYFIRNMEET-YMNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALS 168

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           + ++L +N  I  L+++ N + + GAK +++ L  +  ++ +++L         A    +
Sbjct: 169 LMQMLHENYYIQELNVSGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCN 228

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN--YLQGAKCL 551
            L  N  I +LDL  N   ++       +  F+  + +L       L  N  +L+GA  L
Sbjct: 229 ALTANYRIKVLDLSHNFFSEKGGEQLGQMLAFNEGLQTL------DLSWNQLHLKGAVAL 282

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA---VTSLNLANNFLTKFGQS 608
           + S + VN  L +++L++N   ++GA A+  ALK N  +A   ++S ++ N+   K G+ 
Sbjct: 283 SNSLR-VNITLKTLNLSWNGFGNEGAQALGDALKINATLAYLDISSNHIYNDGAIKLGKG 341

Query: 609 ALTDAKDLVYEMSEKEVNI 627
              +    + +MS+  V +
Sbjct: 342 LEINETLRILKMSQNPVTM 360


>gi|340505146|gb|EGR31503.1| hypothetical protein IMG5_107210 [Ichthyophthirius multifiliis]
          Length = 733

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 142/293 (48%), Gaps = 16/293 (5%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + TLNL+ NPI D G+  +  I+ +N  ++ L L+S  + + G + I + L  N  L+ L
Sbjct: 155 IDTLNLADNPISDNGMHLIKQIM-ENTQIKHLNLASNMISESGFEIIVDELSKNQNLKSL 213

Query: 280 EL-------NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           +L         N     G   +A  +L+N  I  + L  N  G  G + +   L+ NK+L
Sbjct: 214 DLGILEGSIRKNSFGIDGAKCIAALILQNKNIEIIKLYDNDIGVQGGDIIGTALKQNKNL 273

Query: 333 RELHLHGNSIGDEGIR-ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           + L +  N +  +G    L S L      L  LD+G N I +     +  Y++N ++L  
Sbjct: 274 KNLTISENYLKSQGAEFILKSALF-----LESLDLGKNCIKSNAGISIRNYLQNNQNLKR 328

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL  N++  EG ++    L  ++++  I+L GN I  +G   I  VL DN ++  LD++
Sbjct: 329 LNLEFNELSFEGIKEFRQGLLYSQSLQYINLKGNGIGDEGFLMICEVLNDNYILEELDVS 388

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-RYNNTISI 503
            N I + G K  +++L F G +  + L    +G      + D+  +Y N I +
Sbjct: 389 LNEISSAGIKCFADILPFCG-LKNINLSKNFLGDESLFIIGDICQQYENVIKL 440



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 125/280 (44%), Gaps = 25/280 (8%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-------NNSISAK 374
           L K +  N  ++ L+L  N I + G   ++  LS  +  L  LD+G        NS    
Sbjct: 172 LIKQIMENTQIKHLNLASNMISESGFEIIVDELSKNQN-LKSLDLGILEGSIRKNSFGID 230

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A  I   K++  I LY NDIG +G + I  ALKQN+ +  + +  N + S+GA  
Sbjct: 231 GAKCIAALILQNKNIEIIKLYDNDIGVQGGDIIGTALKQNKNLKNLTISENYLKSQGAEF 290

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           I   LK    + SLDL  N I ++   ++   L+ + N+  L L + ++   G +     
Sbjct: 291 I---LKSALFLESLDLGKNCIKSNAGISIRNYLQNNQNLKRLNLEFNELSFEGIKEFRQG 347

Query: 495 LRYNNTISILDLRANGLRDE----VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           L Y+ ++  ++L+ NG+ DE    +C   N          SL  +           G KC
Sbjct: 348 LLYSQSLQYINLKGNGIGDEGFLMICEVLNDNYILEELDVSLNEI--------SSAGIKC 399

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 590
            A         L +I+L+ N + D+  F I    +  E+V
Sbjct: 400 FADILPFC--GLKNINLSKNFLGDESLFIIGDICQQYENV 437



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 156/401 (38%), Gaps = 96/401 (23%)

Query: 137 NLLSGFTGKLFRESKQTLNEFAKE--LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEE 194
           N+L+ ++ +L   S QTL+   KE   +   +++++     D G+  + + +  N   + 
Sbjct: 126 NILNLYSMRLGVTSMQTLSNLLKEDKYKYIDTLNLADNPISDNGMHLIKQIME-NTQIKH 184

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNL-------SGNPIGDEGVKCLCDILVDNAG 247
           ++ A+N I+ +G +     L  N  LK+L+L         N  G +G KC+  +++ N  
Sbjct: 185 LNLASNMISESGFEIIVDELSKNQNLKSLDLGILEGSIRKNSFGIDGAKCIAALILQNKN 244

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNS-------------------------ILRVLELN 282
           +E ++L   D+  +G   I   LK N                           L  L+L 
Sbjct: 245 IEIIKLYDNDIGVQGGDIIGTALKQNKNLKNLTISENYLKSQGAEFILKSALFLESLDLG 304

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +   S+   L  N  ++ L+L  N     G     +GL  ++SL+ ++L GN I
Sbjct: 305 KNCIKSNAGISIRNYLQNNQNLKRLNLEFNELSFEGIKEFRQGLLYSQSLQYINLKGNGI 364

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GDEG   +   L+     L  LD+  N IS+ G    A+ +  C  L  INL  N +GDE
Sbjct: 365 GDEGFLMICEVLNDNYI-LEELDVSLNEISSAGIKCFADILPFC-GLKNINLSKNFLGDE 422

Query: 403 G-----------------------AEKIADA----------------------------- 410
                                   + ++ADA                             
Sbjct: 423 SLFIIGDICQQYENVIKLQKIDFSSSRVADAGILYFLDRIDYFENMRCIKCQDNFISEKV 482

Query: 411 -------LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
                  L +N+T+    + GN +     + + ++L+ N +
Sbjct: 483 EKVLLEILIKNKTLIEFGINGNRLSLSFLNKVKKILQRNII 523


>gi|327260169|ref|XP_003214908.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like
           [Anolis carolinensis]
          Length = 843

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 4/282 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLR 259
           G+ AAG + F  VL  +  L+ L L  N +GD GVK LC+ L      +E L L++ +L 
Sbjct: 535 GLNAAGCQHFIPVLSISQTLRKLTLESNKLGDVGVKLLCEGLKHPQCQLETLSLATCELS 594

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
                 ++ +L  +  LR LEL  N ++ +G   L E L +    +  L L      A  
Sbjct: 595 PACCGDLSSVLSISQTLRELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCDLTAAC 654

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              LA  L  N++L +L L GN +GD G++ L  GL   + K+  L + +  I+A G   
Sbjct: 655 TKDLASILCCNQTLAQLFLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITAAGCME 714

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIAR 437
           ++  +   ++L  I+L+ N + D G   + + LK  +  +  + + G    S     +  
Sbjct: 715 LSSVLSTSQALEDIDLWQNTLEDSGLRLLCEGLKHPDCKLEVLSMWGCKFTSASCGDLQC 774

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           VL  N  +  L L  N +G  G   L E LK H N     +G
Sbjct: 775 VLSTNQNLKKLQLENNKLGDSGVLLLCEGLK-HPNCKLKSIG 815



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 3/255 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +    + +     GD G+  L E L + Q   E +S A   ++ A       VL  +  L
Sbjct: 552 QTLRKLTLESNKLGDVGVKLLCEGLKHPQCQLETLSLATCELSPACCGDLSSVLSISQTL 611

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L L  N + D G++ LC+ L      +E+L L + DL     K +A +L  N  L  L
Sbjct: 612 RELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCDLTAACTKDLASILCCNQTLAQL 671

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L  NM+  SG   L E L  +   I+ L L      A G   L+  L  +++L ++ L 
Sbjct: 672 FLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITAAGCMELSSVLSTSQALEDIDLW 731

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N++ D G+R L  GL     KL VL +     ++     +   +   ++L  + L  N 
Sbjct: 732 QNTLEDSGLRLLCEGLKHPDCKLEVLSMWGCKFTSASCGDLQCVLSTNQNLKKLQLENNK 791

Query: 399 IGDEGAEKIADALKQ 413
           +GD G   + + LK 
Sbjct: 792 LGDSGVLLLCEGLKH 806



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 4/235 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +    +++      D GL  L E L   Q   E++      +TAA  K    +L  N  L
Sbjct: 609 QTLRELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCDLTAACTKDLASILCCNQTL 668

Query: 221 KTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L L GN +GD G+K LC+ L      +++L L    +   G   ++ +L  +  L  +
Sbjct: 669 AQLFLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITAAGCMELSSVLSTSQALEDI 728

Query: 280 ELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +L  N ++ SG   L E L   +  +  L + G    +     L   L  N++L++L L 
Sbjct: 729 DLWQNTLEDSGLRLLCEGLKHPDCKLEVLSMWGCKFTSASCGDLQCVLSTNQNLKKLQLE 788

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            N +GD G+  L  GL     KL  + +    +S      + +Y+K  K  L I+
Sbjct: 789 NNKLGDSGVLLLCEGLKHPNCKLKSIGLDIEELSEDTVREL-KYLKRMKPRLTID 842



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 32/285 (11%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG----------- 328
           +L+   ++ +G       L  + T+R L L  N  G +G   L +GL+            
Sbjct: 530 QLDECGLNAAGCQHFIPVLSISQTLRKLTLESNKLGDVGVKLLCEGLKHPQCQLETLSLA 589

Query: 329 ------------------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                             +++LREL L  N + D G+R L  GL   + KL  L +    
Sbjct: 590 TCELSPACCGDLSSVLSISQTLRELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCD 649

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++A     +A  +   ++L  + L  N +GD G +++ + LK ++  I  + L    I +
Sbjct: 650 LTAACTKDLASILCCNQTLAQLFLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITA 709

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGA 488
            G   ++ VL  +  +  +DL  N +   G + L E LK     +  L +  C+  ++  
Sbjct: 710 AGCMELSSVLSTSQALEDIDLWQNTLEDSGLRLLCEGLKHPDCKLEVLSMWGCKFTSASC 769

Query: 489 EFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSL 532
             +  +L  N  +  L L  N L D  V   C GL   +  + S+
Sbjct: 770 GDLQCVLSTNQNLKKLQLENNKLGDSGVLLLCEGLKHPNCKLKSI 814



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 16/222 (7%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++A G  H    +   ++L  + L  N +GD G + + + LK  +  + T+ L    +  
Sbjct: 536 LNAAGCQHFIPVLSISQTLRKLTLESNKLGDVGVKLLCEGLKHPQCQLETLSLATCELSP 595

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGA 488
                ++ VL  +  +  L+L YN +   G + L E LK     +  L L  C + A+  
Sbjct: 596 ACCGDLSSVLSISQTLRELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCDLTAACT 655

Query: 489 EFVADMLRYNNTISILDLRANGLRDEVCSG----CNGLSFFHSAIYSLKHMLFYSLCINY 544
           + +A +L  N T++ L L  N L D   SG    C GL      I  L       LC   
Sbjct: 656 KDLASILCCNQTLAQLFLGGNMLGD---SGLKQLCEGLKHSQCKIKKL------CLCDTG 706

Query: 545 LQGAKCLA-QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           +  A C+   S    ++AL  IDL  N + D G   + + LK
Sbjct: 707 ITAAGCMELSSVLSTSQALEDIDLWQNTLEDSGLRLLCEGLK 748


>gi|328874934|gb|EGG23299.1| hypothetical protein DFA_05431 [Dictyostelium fasciculatum]
          Length = 669

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 153/340 (45%), Gaps = 23/340 (6%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E ++ A   I   G  A  G L SN +LK L+LS N + ++    +   +  N  V  L 
Sbjct: 310 ESLNLAHTLIGDDGAMAIAGALHSNRSLKHLDLSFNCLENDAGCAIGAAIAKNQAVTTLL 369

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L      +   K I + LK N+ L +L+L+ N I   G  SLA +L  N T+  L L+ N
Sbjct: 370 LKRNQFGEHTVKVIGDALKTNTSLTLLDLSGNQIGLKGAKSLAFSLPLNKTLADLDLSYN 429

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL----------MSGLSSRKGKLA 362
             G  G   +   L  N  L  L+L  N IG E  +++           + L S +  L 
Sbjct: 430 LLGDAGGKLIGDCLATNAGLVRLNLAANRIGVETCKSISQSLKNSNLQFNHLPSNQFNLD 489

Query: 363 VLDIG--------NN-----SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
             DI         N      + S+    H+A    +   L WI L  N +GDEGA  +++
Sbjct: 490 RQDIPIIIHYFLRNKKSTFLTSSSPNIHHIASGQASLSKLRWICLDCNRVGDEGAIVLSE 549

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            +  N T+ +I L  N+I  +G  AI   L  N+ + +L L  N IG  GAK++ + L+ 
Sbjct: 550 VIANNSTLKSISLTNNHIGERGGKAIGESLMMNTKLINLQLDSNLIGPVGAKSIGDALRR 609

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           +  + +L L   +I   G   + D L  NN++  L +R N
Sbjct: 610 NTTLQSLGLSGNRIEDDGGRAINDALCDNNSLKALMIRNN 649



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 198/435 (45%), Gaps = 27/435 (6%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  + ++ +  + + DE    L   L  N+G+  L  S   L DE  + +A +L+  
Sbjct: 160 LRVNPHISSITVMHSHLNDEDGVALFSALSGNSGLLHLNASFNQLGDESVRLLARMLECA 219

Query: 274 SI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-EGNKS 331
              ++ L L  N I      +L +A++   T+  L ++ N  G  G  ++ + L   ++S
Sbjct: 220 GCKIKTLNLATNQITDDSMDALIDAIVGIDTLSELDISSNRIGERGGVSIGQRLIPHDRS 279

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           LR L L  N IG +   A+  GL++    +  L++ +  I   GA  +A  + + +SL  
Sbjct: 280 LRTLVLASNDIGPDAGMAIGQGLATPDIMIESLNLAHTLIGDDGAMAIAGALHSNRSLKH 339

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N + ++    I  A+ +N+ +TT+ L  N         I   LK N+ +T LDL+
Sbjct: 340 LDLSFNCLENDAGCAIGAAIAKNQAVTTLLLKRNQFGEHTVKVIGDALKTNTSLTLLDLS 399

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GAK+L+  L  +  +  L L +  +G +G + + D L  N  +  L+L AN +
Sbjct: 400 GNQIGLKGAKSLAFSLPLNKTLADLDLSYNLLGDAGGKLIGDCLATNAGLVRLNLAANRI 459

Query: 512 RDEVCSGC------NGLSFFH--SAIYSLKHMLFYSLCINYLQGAKC--LAQSFKVVNE- 560
             E C         + L F H  S  ++L       +   +L+  K   L  S   ++  
Sbjct: 460 GVETCKSISQSLKNSNLQFNHLPSNQFNLDRQDIPIIIHYFLRNKKSTFLTSSSPNIHHI 519

Query: 561 --------ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
                    L  I L  N + D+GA  +++ +  N    + S++L NN + + G  A+ +
Sbjct: 520 ASGQASLSKLRWICLDCNRVGDEGAIVLSEVIANNS--TLKSISLTNNHIGERGGKAIGE 577

Query: 613 AKDLVYEMSEKEVNI 627
           +      M+ K +N+
Sbjct: 578 S----LMMNTKLINL 588



 Score = 45.4 bits (106), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L+E         S+ ++  + G+ G   + ESL  N     +   +N I   G K
Sbjct: 542 EGAIVLSEVIANNSTLKSISLTNNHIGERGGKAIGESLMMNTKLINLQLDSNLIGPVGAK 601

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           +    L+ N  L++L LSGN I D+G + + D L DN  ++ L +
Sbjct: 602 SIGDALRRNTTLQSLGLSGNRIEDDGGRAINDALCDNNSLKALMI 646


>gi|29838703|gb|AAN52934.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 9/226 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 722 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 781

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 782 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 837

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 838 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 897

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            H N+  L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 898 DHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|332242716|ref|XP_003270528.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Nomascus leucogenys]
          Length = 953

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 1/213 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  L L+ N     G   L++ L   K +  L L+ N I D G R +   L   KG L
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-L 786

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G   +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ 
Sbjct: 787 THLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLS 846

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N + ++G  ++AR L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   
Sbjct: 847 LASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQN 906

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           QI A G   +AD L+ N  I+ + L  N ++ E
Sbjct: 907 QITAKGTAQLADALQSNTGITEICLNGNLIKPE 939



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
           +N  +    LN
Sbjct: 922 SNTGITEICLN 932



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 5/215 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L VL L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELRPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   + + K   ++ D+G   N +  +GA   AE +
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSK---SISDVGMWGNQVGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N +  EG + +A AL+QN ++  + L  N ++ + A ++A +LK N 
Sbjct: 837 RNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  L L  N I A G   L++ L+ +  I  + L
Sbjct: 897 TLKHLWLIQNQITAKGTAQLADALQSNTGITEICL 931



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L S  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELNDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 42.0 bits (97), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L       
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KCLA + K  ++++
Sbjct: 781 ----------DE-CKGLTHLKLGKNKITS--------------EGGKCLALAVKN-SKSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + + +  N++ D+GA A A+AL+ +   ++T+L+LA+N ++  G  +L  A
Sbjct: 815 SDVGMWGNQVGDEGAKAFAEALRNHP--SLTTLSLASNGVSTEGGKSLARA 863


>gi|28386271|gb|AAH44774.1| Nod2 protein [Mus musculus]
          Length = 1045

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 773  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 826

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 827  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 886

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 887  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 945

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 946  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 1005

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 1006 EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1037



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 838  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 897

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 898  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 957

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 958  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 1017

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 1018 ILEVWLRGNTFSLEEIQT----LSSRDARL 1043



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 786  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 842

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 843  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 901

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 902  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 961

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 962  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 1021

Query: 505  DLRAN 509
             LR N
Sbjct: 1022 WLRGN 1026



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 759 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 818

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 819 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 874

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 875 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 934

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 935 KWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 975



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 4/218 (1%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
            + L+   ++ +   + GD G+  L   LG       +    N I+  G +          
Sbjct: 792  QHLQRPVALQLDYNSVGDVGVEQLRPCLG---VCTALYLRDNNISDRGARTLVECALRCE 848

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L+ L L  N + D     +  +L        L++ +  +   GA+ +A+ LK+N+ L+ 
Sbjct: 849  QLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKF 908

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L    N +   G  +LAE + ++  ++ L L GN  G++GA ALA  LE NKSL EL L 
Sbjct: 909  LGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLE 968

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             N I DEG+ +L  GL  R   L  L + NN I+ +GA
Sbjct: 969  ENHICDEGVYSLAEGL-KRNSTLKFLKLSNNGITYRGA 1005



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 853  LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 912

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 913  GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 972

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 973  CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 1026


>gi|242062330|ref|XP_002452454.1| hypothetical protein SORBIDRAFT_04g026090 [Sorghum bicolor]
 gi|241932285|gb|EES05430.1| hypothetical protein SORBIDRAFT_04g026090 [Sorghum bicolor]
          Length = 543

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S  +L+ L +  + I +E  K L +++     ++ L   
Sbjct: 219 LNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA  IAE++K +  +     +   I   G  +L+EAL   + ++ L L  N  
Sbjct: 279 NNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L EL+L   ++ +EG  +++  L     +L VL++  N I+AK
Sbjct: 339 GVDAGLALSKTLSKLHDLVELYLSDLNLENEGTISIVKALKQSAPQLEVLEMAGNEINAK 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            A  +AE +   +SL  + L  N++ D+GA  IA +L+   T +  +D+  N +   GA 
Sbjct: 399 AALDLAECLTAMQSLKKLTLAENELKDDGAVIIAKSLEDGHTDLKELDVSTNMLQRVGAR 458

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             AR + D      L++  N I  +G   + E+LK
Sbjct: 459 CFARAVADKPAFVQLNINGNFISDEGIDEVKEILK 493



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 135/303 (44%), Gaps = 31/303 (10%)

Query: 144 GKLFRESKQTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           G+   E+   +  F+K L       +++S    G++G+   +E L   ++ EE+    +G
Sbjct: 194 GRPEDEALDVMRIFSKALEGSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDG 253

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I+    KA   ++ +   LK L+   N  GDEG   + +++  +  VE  + S+  +  +
Sbjct: 254 ISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSD 313

Query: 262 GAKAIAELLKNNSILRVLELNNNM----------------------------IDYSGFTS 293
           G  A++E L   + L+ L+L +N+                            ++  G  S
Sbjct: 314 GGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLSKLHDLVELYLSDLNLENEGTIS 373

Query: 294 LAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           + +AL +++  +  L + GN   A  A  LA+ L   +SL++L L  N + D+G   +  
Sbjct: 374 IVKALKQSAPQLEVLEMAGNEINAKAALDLAECLTAMQSLKKLTLAENELKDDGAVIIAK 433

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  LD+  N +   GA   A  + +  + + +N+  N I DEG +++ + LK
Sbjct: 434 SLEDGHTDLKELDVSTNMLQRVGARCFARAVADKPAFVQLNINGNFISDEGIDEVKEILK 493

Query: 413 QNR 415
             +
Sbjct: 494 AGK 496



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 94/220 (42%), Gaps = 30/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG  ++AE +  +   E    +A  I + G  A    L +   LK L+L  N  G + 
Sbjct: 283 GDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDA 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L     +  L LS ++L +EG  +I + LK ++  L VLE+  N I+      
Sbjct: 343 GLALSKTLSKLHDLVELYLSDLNLENEGTISIVKALKQSAPQLEVLEMAGNEINAKAALD 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLREL----------------- 335
           LAE L    +++ L L  N     GA  +AK LE G+  L+EL                 
Sbjct: 403 LAECLTAMQSLKKLTLAENELKDDGAVIIAKSLEDGHTDLKELDVSTNMLQRVGARCFAR 462

Query: 336 -----------HLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                      +++GN I DEGI  +   L + K  L VL
Sbjct: 463 AVADKPAFVQLNINGNFISDEGIDEVKEILKAGKKSLDVL 502



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 109/245 (44%), Gaps = 31/245 (12%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L ++N+  N +G++G    ++ LK   ++  + +  + I  + A A++ ++     +  L
Sbjct: 216 LRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVL 275

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
               N  G +GA  ++E++K   N+ + +    +IG+ G   +++ L     +  LDLR 
Sbjct: 276 HFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRD 335

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL------CINYLQGAKCLAQSFKVVN--- 559
           N     V +G   LS   S ++ L  +    L       I+ ++  K  A   +V+    
Sbjct: 336 NLFG--VDAGL-ALSKTLSKLHDLVELYLSDLNLENEGTISIVKALKQSAPQLEVLEMAG 392

Query: 560 ------------------EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                             ++L  + LA NE++DDGA  IA++L+      +  L+++ N 
Sbjct: 393 NEINAKAALDLAECLTAMQSLKKLTLAENELKDDGAVIIAKSLEDGH-TDLKELDVSTNM 451

Query: 602 LTKFG 606
           L + G
Sbjct: 452 LQRVG 456


>gi|239948039|ref|ZP_04699792.1| leucine-rich repeat protein [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922315|gb|EER22339.1| leucine-rich repeat protein [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 866

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 193/401 (48%), Gaps = 73/401 (18%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N IGD G   L   L   + +  L L+S D+  +G +++A  LK+  I  +L L 
Sbjct: 143 LDLSNNHIGDSGAVALASGL-KGSKIISLNLTSNDIEQKGVQSLANSLKDTEI-TILNLC 200

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  +LA +L +NS I +L L GN  G  G + LA+ L+G + L  L LH N I
Sbjct: 201 ANKIGQTGAITLANSL-KNSQITNLELGGNRIGDHGIHILAQNLKGTQ-LTYLGLHYNDI 258

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK------------------ 384
           G+EG++AL+ G+  +  K+  L + +N I  + +  +A  +K                  
Sbjct: 259 GNEGVQALIHGI--QDTKIINLKLSSNHIWYEESETLARSLKHTHITHLSLAGSIGRGVL 316

Query: 385 -----NCKSLLWINLYMN---DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                N      INL ++    I  +  + +A  LK N  IT ++   N +  +GA A++
Sbjct: 317 KVISENLVGTQIINLDLSCNRSITSKDMKFLAKDLK-NTKITELNFYNNRMGEEGAIALS 375

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             LKD + IT+LDL+YN IG +G KAL+ VL    NI +L L   ++   GA+ +A +L 
Sbjct: 376 EGLKD-TQITNLDLSYNRIGIEGTKALANVLD-KTNIMSLNLRKSRMEDDGAKALAVVLP 433

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
            N  I  L+L  + + DE                                G + LA+S +
Sbjct: 434 -NTKIKYLNLYKSLIGDE--------------------------------GIRALAESLE 460

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
             N  +T+++L  N I   GA A+A+ LK   +  +T L+L
Sbjct: 461 --NTQITNLNLGLNSIDQAGAMALAKGLK---NTQITHLHL 496



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 147/289 (50%), Gaps = 37/289 (12%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  +  L   +  + +EGA A++E LK+  I   L+L+ N I   G  +LA  +L+ + I
Sbjct: 353 NTKITELNFYNNRMGEEGAIALSEGLKDTQITN-LDLSYNRIGIEGTKALAN-VLDKTNI 410

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            SL+L  +     GA ALA  L  N  ++ L+L+ + IGDEGIRAL   L + +  +  L
Sbjct: 411 MSLNLRKSRMEDDGAKALAVVLP-NTKIKYLNLYKSLIGDEGIRALAESLENTQ--ITNL 467

Query: 365 DIGNNSISAKGAFHVAEYIKNCK-----------------------------SLLWINLY 395
           ++G NSI   GA  +A+ +KN +                              ++ ++L 
Sbjct: 468 NLGLNSIDQAGAMALAKGLKNTQITHLHLYATLRSYKKDQSTQIFVQGLRGSKVMDLDLS 527

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            NDI D     + ++LK ++ I  ++LGGN+I  KGA  +A  LKD + I  L+L+YN I
Sbjct: 528 SNDIDDIEVHTLGESLKDSKIID-LNLGGNSIKDKGAEILANCLKD-TQIAYLNLSYNNI 585

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           G++G + L+  LK    I  L L    IG  GA+ +A  L+    I+++
Sbjct: 586 GSEGIRTLAACLK-DTQIIHLVLNEKSIGKDGAQALATGLKNTQMINLI 633



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 187/415 (45%), Gaps = 45/415 (10%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ +  ++  E    L+E  K+ +  +++D+S    G EG   LA  L        ++  
Sbjct: 359 LNFYNNRMGEEGAIALSEGLKDTQ-ITNLDLSYNRIGIEGTKALANVLDKTNIMS-LNLR 416

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            + +   G KA   V+  N  +K LNL  + IGDEG+                       
Sbjct: 417 KSRMEDDGAKAL-AVVLPNTKIKYLNLYKSLIGDEGI----------------------- 452

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG---NYGG 315
                +A+AE L+N  I   L L  N ID +G  +LA+  L+N+ I  LHL     +Y  
Sbjct: 453 -----RALAESLENTQITN-LNLGLNSIDQAGAMALAKG-LKNTQITHLHLYATLRSYKK 505

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
                   +GL G+K + +L L  N I D  +  L  G S +  K+  L++G NSI  KG
Sbjct: 506 DQSTQIFVQGLRGSKVM-DLDLSSNDIDDIEVHTL--GESLKDSKIIDLNLGGNSIKDKG 562

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +A  +K+ + + ++NL  N+IG EG   +A  LK  + I  + L   +I   GA A+
Sbjct: 563 AEILANCLKDTQ-IAYLNLSYNNIGSEGIRTLAACLKDTQIIHLV-LNEKSIGKDGAQAL 620

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A  LK+  +I +L L    +G DG  ++ +  +   +I  L + +  IG +    + ++L
Sbjct: 621 ATGLKNTQMI-NLILTSQHLGKDGMNSMIKDFQ-DSHIACLDINFEYIGLNTYWELRNVL 678

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
            Y N I+   L  +  ++ V    N L  F + I  L    +   CI ++    C
Sbjct: 679 -YQNWINAKHL-THIFKNVVFEDNNNLLAFSTIINDLSLEQYIDQCIFFINSINC 731



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 166/397 (41%), Gaps = 84/397 (21%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           L+++ I SL L+       G  AL +GL+ +  +  L    NSI ++GI+A   GL   K
Sbjct: 26  LKDTHISSLILSHYRITKEGGEALVQGLK-DTQITHLKFSENSIDNDGIQAFAEGLKDTK 84

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCK--------------------------SLLWI 392
                ++ G ++I       + E +KN K                           +  +
Sbjct: 85  ITHLNMNFGFDNI-GDAVITLVEKLKNTKITHLSLHAYKMKKEIMPFLAQVLKDTQIAHL 143

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IGD GA  +A  LK ++ I +++L  N+I  KG  ++A  LKD   IT L+L  
Sbjct: 144 DLSNNHIGDSGAVALASGLKGSK-IISLNLTSNDIEQKGVQSLANSLKDTE-ITILNLCA 201

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA  L+  LK +  I  L+LG  +IG  G   +A  L+    ++ L L  N + 
Sbjct: 202 NKIGQTGAITLANSLK-NSQITNLELGGNRIGDHGIHILAQNLK-GTQLTYLGLHYNDIG 259

Query: 513 DE-VCSGCNG--------LSFFHSAIY---------SLKHMLFYSLCI------------ 542
           +E V +  +G        L    + I+         SLKH     L +            
Sbjct: 260 NEGVQALIHGIQDTKIINLKLSSNHIWYEESETLARSLKHTHITHLSLAGSIGRGVLKVI 319

Query: 543 -NYLQGAKCLAQSFKVVNEALTSIDLAF-----------------NEIRDDGAFAIAQAL 584
              L G + +       N ++TS D+ F                 N + ++GA A+++ L
Sbjct: 320 SENLVGTQIINLDLS-CNRSITSKDMKFLAKDLKNTKITELNFYNNRMGEEGAIALSEGL 378

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           K   D  +T+L+L+ N +   G  AL +  D    MS
Sbjct: 379 K---DTQITNLDLSYNRIGIEGTKALANVLDKTNIMS 412


>gi|29838739|gb|AAN52937.1| NOD2 [Mus musculus]
 gi|29838835|gb|AAN62467.1| NOD2 [Mus musculus]
 gi|29838895|gb|AAN57793.1| NOD2 [Mus musculus]
 gi|29838919|gb|AAN78329.1| NOD2 [Mus musculus]
 gi|29838931|gb|AAN59992.1| NOD2 [Mus musculus]
 gi|29838943|gb|AAN59993.1| NOD2 [Mus musculus]
 gi|29838967|gb|AAN59995.1| NOD2 [Mus musculus]
 gi|29838979|gb|AAN60733.1| NOD2 [Mus musculus]
 gi|29838991|gb|AAN60734.1| NOD2 [Mus musculus]
 gi|29839039|gb|AAN62468.1| NOD2 [Mus musculus]
 gi|29839111|gb|AAN63036.1| NOD2 [Mus musculus]
 gi|29839123|gb|AAN63038.1| NOD2 [Mus musculus]
 gi|29839147|gb|AAN63040.1| NOD2 [Mus musculus]
 gi|29839159|gb|AAN63041.1| NOD2 [Mus musculus]
 gi|30017199|gb|AAN52478.1| NOD2 [Mus musculus]
 gi|30017211|gb|AAN84594.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 727 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 786

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 787 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 842

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 843 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 902

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 903 KWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|29838715|gb|AAN52935.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 727 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 786

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 787 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 842

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 843 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 902

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 903 KWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|357440739|ref|XP_003590647.1| Ran GTPase activating protein [Medicago truncatula]
 gi|355479695|gb|AES60898.1| Ran GTPase activating protein [Medicago truncatula]
          Length = 533

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 155/346 (44%), Gaps = 36/346 (10%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITAAGIKA---FDGVLQ 215
           +F+++  S R+FG +    +   L       +EV    F A    A  I+    F   L+
Sbjct: 153 SFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEAEAIEVMNIFSSALE 212

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             + L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA+AEL+ +   
Sbjct: 213 GAV-LRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEK 271

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+VL  +NNM    G  ++A+ +  +  +     +    GA G  ALA+ L     L++L
Sbjct: 272 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 331

Query: 336 HLHGNSIG----------------------------DEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  G                            D+G  AL + L      L +LD+ 
Sbjct: 332 DLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESAPSLEILDMA 391

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N I+AK A  VAE I + + L  +NL  N++ DEGA  I+ AL+    ++ +DL  N I
Sbjct: 392 GNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGLGQLSEVDLSTNLI 451

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
              GA  +A  +        L++  N I  +G   L ++ K   +I
Sbjct: 452 TWSGAKLLAEAVVQKPGFKLLNVNANFISDEGIDELKDIFKNSPDI 497



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 143/295 (48%), Gaps = 38/295 (12%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSSALEG-AVLRHLNLSNNAMGEKGVRAFRALLKSQ-NDLEELYLMNDGISEEAAKAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I + + L  ++ + N  GDEGA  IAD +K++  +         + ++G  A+A  L
Sbjct: 263 AELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+V+    ++  + L +  +   GAE +A+ L+ + 
Sbjct: 323 GACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            ++ ILD+  N +                   + K  +  + CI+  Q            
Sbjct: 383 PSLEILDMAGNDI-------------------TAKTAVSVAECISSKQ------------ 411

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              LT ++L+ NE++D+GA  I++AL+      ++ ++L+ N +T  G   L +A
Sbjct: 412 --FLTKLNLSENELKDEGAGLISKALEGL--GQLSEVDLSTNLITWSGAKLLAEA 462



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 21/368 (5%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           E +K + E+LK     R  E N  +I   G  ++ E + + S  R   ++G       A+
Sbjct: 91  ESSKLMLEVLKRGP--RGKEENGELISEKGDAAV-ETVFDISGGRRAFIDGEE-----AS 142

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L K L G  S   +     S G +    +   L S K +L  +D+ ++ I+ +      
Sbjct: 143 ELLKPLMGPNSFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDL-SDFIAGRPEAEAI 201

Query: 381 EYIKNCKSLL------WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           E +    S L       +NL  N +G++G       LK    +  + L  + I  + A A
Sbjct: 202 EVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKA 261

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A ++     +  L    N  G +GA A+++V+K    +   +    ++GA G   +A+ 
Sbjct: 262 VAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEA 321

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L     +  LDLR N     V +G   LS        L  +    L +    GA+ LA +
Sbjct: 322 LGACTHLKKLDLRDNMFG--VEAGV-ALSKVIPVFADLTEIYLSYLNLED-DGAEALANA 377

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
            K    +L  +D+A N+I    A ++A+ + + +   +T LNL+ N L   G   ++ A 
Sbjct: 378 LKESAPSLEILDMAGNDITAKTAVSVAECISSKQ--FLTKLNLSENELKDEGAGLISKAL 435

Query: 615 DLVYEMSE 622
           + + ++SE
Sbjct: 436 EGLGQLSE 443


>gi|320169052|gb|EFW45951.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 206

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 33/187 (17%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD+GAE IA+ALK N T++ +DLG N I   GA +IA  LK N+ +T+L L  N IG  
Sbjct: 46  IGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRNQIGDA 105

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A++E LK +  +N L L  C IG +G   +A+ L+ N T+++L L  N + D     
Sbjct: 106 GAEAIAEALKVNTTVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIGD----- 160

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                       GA+ +A++ K VN  LT ++L  N I + G  
Sbjct: 161 ---------------------------AGAQAIAETLK-VNTTLTWLNLPQNCIGNSGTR 192

Query: 579 AIAQALK 585
           AI +ALK
Sbjct: 193 AIVEALK 199



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 83/144 (57%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +G+  I   GA  +AE +K   ++  ++L  N IG  GA+ IA+ALK N T+TT+ L  N
Sbjct: 41  LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRN 100

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA AIA  LK N+ +  LDL    IG  G  AL+E LK +  +  L LG   IG 
Sbjct: 101 QIGDAGAEAIAEALKVNTTVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIGD 160

Query: 486 SGAEFVADMLRYNNTISILDLRAN 509
           +GA+ +A+ L+ N T++ L+L  N
Sbjct: 161 AGAQAIAETLKVNTTLTWLNLPQN 184



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 95/191 (49%), Gaps = 29/191 (15%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           ++S+ +  R  GD+G   +AE+L  N T  E+    N I  AG ++    L+ N  L TL
Sbjct: 37  YASI-LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTL 95

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N IGD G                            A+AIAE LK N+ + VL+L  
Sbjct: 96  YLDRNQIGDAG----------------------------AEAIAEALKVNTTVNVLDLRL 127

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             I Y+G  +LAEAL  N+T+  L+L  N  G  GA A+A+ L+ N +L  L+L  N IG
Sbjct: 128 CHIGYAGVLALAEALKVNTTVTMLYLGKNAIGDAGAQAIAETLKVNTTLTWLNLPQNCIG 187

Query: 344 DEGIRALMSGL 354
           + G RA++  L
Sbjct: 188 NSGTRAIVEAL 198



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 35/192 (18%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           LG   I   GA AIA  LK N+ ++ LDL  N IG  GA++++E LK +  + TL L   
Sbjct: 41  LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRN 100

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           QIG +GAE +A+ L+ N T+++LDLR                                LC
Sbjct: 101 QIGDAGAEAIAEALKVNTTVNVLDLR--------------------------------LC 128

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                G   LA++ KV N  +T + L  N I D GA AIA+ LK N    +T LNL  N 
Sbjct: 129 HIGYAGVLALAEALKV-NTTVTMLYLGKNAIGDAGAQAIAETLKVN--TTLTWLNLPQNC 185

Query: 602 LTKFGQSALTDA 613
           +   G  A+ +A
Sbjct: 186 IGNSGTRAIVEA 197



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 1/156 (0%)

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD+G  A+   L      ++ LD+G N I   GA  +AE +K   +L  + L  N IG
Sbjct: 45  QIGDDGAEAIAEALKVNT-TMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRNQIG 103

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D GAE IA+ALK N T+  +DL   +I   G  A+A  LK N+ +T L L  N IG  GA
Sbjct: 104 DAGAEAIAEALKVNTTVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIGDAGA 163

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           +A++E LK +  +  L L    IG SG   + + L+
Sbjct: 164 QAIAETLKVNTTLTWLNLPQNCIGNSGTRAIVEALK 199



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 1/162 (0%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L +  I   G  ++AEAL  N+T+  L L  N  G  GA ++A+ L+ N +L  L+L  N
Sbjct: 41  LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRN 100

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G  A+   L      + VLD+    I   G   +AE +K   ++  + L  N IG
Sbjct: 101 QIGDAGAEAIAEALKVNT-TVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIG 159

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           D GA+ IA+ LK N T+T ++L  N I + G  AI   LKD+
Sbjct: 160 DAGAQAIAETLKVNTTLTWLNLPQNCIGNSGTRAIVEALKDS 201



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 29/188 (15%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L    IGD+G + + + L  N  +  L L    +   GA++IAE LK N+ L  L L+ N
Sbjct: 41  LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRN 100

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AEAL  N+T+  L L   + G  G  ALA+ L+ N ++  L+L  N+IGD
Sbjct: 101 QIGDAGAEAIAEALKVNTTVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIGD 160

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G +A                             +AE +K   +L W+NL  N IG+ G 
Sbjct: 161 AGAQA-----------------------------IAETLKVNTTLTWLNLPQNCIGNSGT 191

Query: 405 EKIADALK 412
             I +ALK
Sbjct: 192 RAIVEALK 199


>gi|291406721|ref|XP_002719621.1| PREDICTED: nucleotide-binding oligomerization domain containing
           2-like [Oryctolagus cuniculus]
          Length = 491

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 132/248 (53%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G +G K +   LV N  + +L+L    + +EG  ++ E+L+ N  L
Sbjct: 109 NMEEPYMNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYL 168

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N +   G   ++E L  N S++  L L+GN      A  L++ +  N  +++L
Sbjct: 169 QELNISDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKL 228

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N   D+G   L   L+   G L  LD+  N    +GA  +   ++   +L  ++L 
Sbjct: 229 NLSHNQFSDQGGEQLGQMLALNVG-LKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLS 287

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+EGA  + + L+ +  +  +D+ GN+I++ GAS ++R L+ N  +  L L+ NPI
Sbjct: 288 MNGFGNEGALALGEVLRLSNCLVFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSLNPI 347

Query: 456 GADGAKAL 463
             DGA  L
Sbjct: 348 TMDGATLL 355



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 32/313 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++    G +G   +A +L  N T  ++    N I   G+ +   +LQ N  L+ LN+S
Sbjct: 115 MNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNIS 174

Query: 227 GNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +G EG K + + L  NA  + +L+LS  + ++E A  +++ + +N  ++ L L++N 
Sbjct: 175 DNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHNQ 234

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L + L  N  ++SL L+ N+    GA AL  GL  N +L+ L L  N  G+E
Sbjct: 235 FSDQGGEQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGNE 294

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L                            + NC  L+++++  NDI ++GA 
Sbjct: 295 GALALGEVLR---------------------------LSNC--LVFLDVSGNDINNDGAS 325

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKAL 463
           K++  L+ N ++  + L  N I   GA+ +   +K N  S +  LD++   +     K L
Sbjct: 326 KLSRGLEYNESLRVLKLSLNPITMDGATLLVMSIKKNPKSRLEELDISNVLVTEQFTKML 385

Query: 464 SEVLKFHGNINTL 476
             V   H  ++ L
Sbjct: 386 DGVYAVHPQLDVL 398



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 117/233 (50%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + LN++ +   G  ++A AL+ N+TI  L L  N     G  +L + L+ N  L+EL++ 
Sbjct: 115 MNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNIS 174

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G EG + +   L      L  L +  N+   + A  +++ + +   +  +NL  N 
Sbjct: 175 DNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHNQ 234

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             D+G E++   L  N  + ++DL  N+ H +GA A+   L+ N  + +LDL+ N  G +
Sbjct: 235 FSDQGGEQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGNE 294

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           GA AL EVL+    +  L +    I   GA  ++  L YN ++ +L L  N +
Sbjct: 295 GALALGEVLRLSNCLVFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSLNPI 347



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 2/242 (0%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L  +G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ L+++ N  G  
Sbjct: 122 LGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNISDNDLGLE 181

Query: 318 GANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           GA  +++ L+ N  SL +L L GN+  +E   AL+S   S   ++  L++ +N  S +G 
Sbjct: 182 GAKIISEFLQRNASSLWKLKLSGNNFKEESA-ALLSQAMSSNYQIKKLNLSHNQFSDQGG 240

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             + + +     L  ++L  N     GA  + + L+ N T+ T+DL  N   ++GA A+ 
Sbjct: 241 EQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGNEGALALG 300

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            VL+ ++ +  LD++ N I  DGA  LS  L+++ ++  LKL    I   GA  +   ++
Sbjct: 301 EVLRLSNCLVFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSLNPITMDGATLLVMSIK 360

Query: 497 YN 498
            N
Sbjct: 361 KN 362



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G +G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 115 MNLNHHGLGPKGTKAIAIALVSNT-TIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNI 173

Query: 395 YMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             ND+G EGA+ I++ L++N  ++  + L GNN   + A+ +++ +  N  I  L+L++N
Sbjct: 174 SDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHN 233

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T+  LDL  NG   
Sbjct: 234 QFSDQGGEQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNG--- 290

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
                     F +    +L  +L  S C+ +L          GA  L++  +  NE+L  
Sbjct: 291 ----------FGNEGALALGEVLRLSNCLVFLDVSGNDINNDGASKLSRGLE-YNESLRV 339

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L+ N I  DGA  +  ++K N    +  L+++N  +T+
Sbjct: 340 LKLSLNPITMDGATLLVMSIKKNPKSRLEELDISNVLVTE 379



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 41/251 (16%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           V+ +I+N +   ++NL  + +G +G + IA AL  N TI  ++L  N I  +G  ++  +
Sbjct: 103 VSYFIRNMEEP-YMNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEM 161

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEV----------LKFHGN---------------- 472
           L++N  +  L+++ N +G +GAK +SE           LK  GN                
Sbjct: 162 LQENYYLQELNISDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSS 221

Query: 473 ---INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSA 528
              I  L L   Q    G E +  ML  N  +  LDL  N        + CNGL     A
Sbjct: 222 NYQIKKLNLSHNQFSDQGGEQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGL----RA 277

Query: 529 IYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
             +LK +    L +N    +GA  L +  ++ N  L  +D++ N+I +DGA  +++ L+ 
Sbjct: 278 NVTLKTL---DLSMNGFGNEGALALGEVLRLSN-CLVFLDVSGNDINNDGASKLSRGLEY 333

Query: 587 NEDVAVTSLNL 597
           NE + V  L+L
Sbjct: 334 NESLRVLKLSL 344



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 4/219 (1%)

Query: 149 ESKQTLNEF-AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + ++EF  +   +   + +SG NF +E    L++++  N   ++++ + N  +  G 
Sbjct: 181 EGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHNQFSDQGG 240

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ LK+L+LS N     G   LC+ L  N  ++ L LS     +EGA A+ 
Sbjct: 241 EQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGNEGALALG 300

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+L+ ++ L  L+++ N I+  G + L+  L  N ++R L L+ N     GA  L   ++
Sbjct: 301 EVLRLSNCLVFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSLNPITMDGATLLVMSIK 360

Query: 328 GNKS--LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            N    L EL +  N +  E    ++ G+ +   +L VL
Sbjct: 361 KNPKSRLEELDI-SNVLVTEQFTKMLDGVYAVHPQLDVL 398


>gi|148679112|gb|EDL11059.1| caspase recruitment domain family, member 15 [Mus musculus]
          Length = 1020

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 748  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 801

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 802  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 861

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 862  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 920

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 921  SMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 980

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 981  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1012



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 813  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 872

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 873  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLE 932

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 933  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 992

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 993  ILEVWLRGNTFSLEEIQT----LSSRDARL 1018



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 9/226 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 729 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 788

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 789 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 844

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 845 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 904

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            H N+  L L    IG+ GAE +A ML  N ++  L L  N + DE
Sbjct: 905 DHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHICDE 950



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 761  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 817

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 818  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 876

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 877  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKS 936

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 937  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 996

Query: 505  DLRAN 509
             LR N
Sbjct: 997  WLRGN 1001



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 4/218 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           + L+   ++ +   + GD G+  L   LG       +    N I+  G +          
Sbjct: 767 QHLQRPVALQLDYNSVGDVGVEQLRPCLG---VCTALYLRDNNISDRGARTLVECALRCE 823

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L+ L L  N + D     +  +L        L++ +  +   GA+ +A+ LK+N+ L+ 
Sbjct: 824 QLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKF 883

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L    N +   G  +LAE + ++  ++ L L GN  G++GA ALA  LE NKSL EL L 
Sbjct: 884 LGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLE 943

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            N I DEG+ +L  GL  R   L  L + NN I+ +GA
Sbjct: 944 ENHICDEGVYSLAEGL-KRNSTLKFLKLSNNGITYRGA 980



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 828  LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 887

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 888  GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHI 947

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 948  CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 1001


>gi|29838667|gb|AAN52482.1| NOD2 [Mus musculus domesticus]
          Length = 1013

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 9/226 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 722 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 781

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 782 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 837

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 838 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 897

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            H N+  L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 898 DHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|29838727|gb|AAN52936.1| NOD2 [Mus musculus]
 gi|29838787|gb|AAN57788.1| NOD2 [Mus musculus]
 gi|29838823|gb|AAN57792.1| NOD2 [Mus musculus]
 gi|29838847|gb|AAN62472.1| NOD2 [Mus musculus]
 gi|29838883|gb|AAN57790.1| NOD2 [Mus musculus]
 gi|29838907|gb|AAN59991.1| NOD2 [Mus musculus]
 gi|29839027|gb|AAN60737.1| NOD2 [Mus musculus]
 gi|29839051|gb|AAN62469.1| NOD2 [Mus musculus]
 gi|29839087|gb|AAN78330.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 9/226 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 722 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 781

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 782 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 837

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 838 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 897

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            H N+  L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 898 DHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|74154099|dbj|BAE43401.1| unnamed protein product [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 727 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 786

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 787 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 842

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 843 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 902

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 903 KWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|156229394|emb|CAM28209.1| Ran GTPase activating protein [Nicotiana benthamiana]
          Length = 407

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L    + I  E  + + +++     ++ L   
Sbjct: 128 LNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVLHFH 187

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G ++L EAL   S ++ L L  N  
Sbjct: 188 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGMCSHLKKLDLRDNMF 247

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L+K L  ++ L E++L   ++ DEG  A+ + L      L+VL++  N I+ +
Sbjct: 248 GPEAGLVLSKALSKHEKLTEVYLSYLNLEDEGATAIANALKDSAPSLSVLEMAGNDITQE 307

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 308 AAPAIASCIAAKQFLSKLSLGENELMDEGAIQIAKALRGHNHLKEVDMNTNTLRRAGARV 367

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +AR +        L++  N I  +G   L ++ K
Sbjct: 368 LARTVLHKDEFKLLNVNGNFISEEGVDELKDIFK 401



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 30/296 (10%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L   +  +  E A+A++EL+ +   L+VL
Sbjct: 125 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVL 184

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G +AL + L     L++L L  
Sbjct: 185 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGMCSHLKKLDLRD 244

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +    V                         L ++NL     
Sbjct: 245 NMFGPEAGLVLSKALSKHEKLTEVY------------------------LSYLNLE---- 276

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  +++ +++ GN+I  + A AIA  +     ++ L L  N +  +
Sbjct: 277 -DEGATAIANALKDSAPSLSVLEMAGNDITQEAAPAIASCIAAKQFLSKLSLGENELMDE 335

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +E
Sbjct: 336 GAIQIAKALRGHNHLKEVDMNTNTLRRAGARVLARTVLHKDEFKLLNVNGNFISEE 391



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 2/244 (0%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ + ++E          +       GDEG   +AE +  +   E+   ++  + + G 
Sbjct: 165 QEAARAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGG 224

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L     LK L+L  N  G E    L   L  +  +  + LS ++L DEGA AIA
Sbjct: 225 SALCEALGMCSHLKKLDLRDNMFGPEAGLVLSKALSKHEKLTEVYLSYLNLEDEGATAIA 284

Query: 268 ELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK+++  L VLE+  N I      ++A  +     +  L L  N     GA  +AK L
Sbjct: 285 NALKDSAPSLSVLEMAGNDITQEAAPAIASCIAAKQFLSKLSLGENELMDEGAIQIAKAL 344

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
            G+  L+E+ ++ N++   G R L   +   K +  +L++  N IS +G   + +  K  
Sbjct: 345 RGHNHLKEVDMNTNTLRRAGARVLARTV-LHKDEFKLLNVNGNFISEEGVDELKDIFKKS 403

Query: 387 KSLL 390
             +L
Sbjct: 404 PEML 407



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 138/324 (42%), Gaps = 70/324 (21%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L   N+ IS + A  V
Sbjct: 114 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELYFINDGISQEAARAV 171

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA                             AIA ++
Sbjct: 172 SELVPSTEKLKVLHFHNNMTGDEGA----------------------------VAIAEIV 203

Query: 440 KDN----------------------------SVITSLDLAYNPIGADGAKALSEVLKFHG 471
           K +                            S +  LDL  N  G +    LS+ L  H 
Sbjct: 204 KRSPLLEDFRCSSTRVGSEGGSALCEALGMCSHLKKLDLRDNMFGPEAGLVLSKALSKHE 263

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIY 530
            +  + L +  +   GA  +A+ L+ +  ++S+L++  N +  E            S I 
Sbjct: 264 KLTEVYLSYLNLEDEGATAIANALKDSAPSLSVLEMAGNDITQEAAPA------IASCIA 317

Query: 531 SLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
           + + +   SL  N L  +GA  +A++ +  N  L  +D+  N +R  GA  +A+ +   +
Sbjct: 318 AKQFLSKLSLGENELMDEGAIQIAKALRGHNH-LKEVDMNTNTLRRAGARVLARTVLHKD 376

Query: 589 DVAVTSLNLANNFLTKFGQSALTD 612
           +  +  LN+  NF+++ G   L D
Sbjct: 377 EFKL--LNVNGNFISEEGVDELKD 398


>gi|260819104|ref|XP_002604877.1| hypothetical protein BRAFLDRAFT_77288 [Branchiostoma floridae]
 gi|229290206|gb|EEN60887.1| hypothetical protein BRAFLDRAFT_77288 [Branchiostoma floridae]
          Length = 486

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 126/236 (53%), Gaps = 3/236 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           +  L+L  N +G EG   + ++L  N  +  + LS  +L  EGA A+AE+L+ N ++  +
Sbjct: 175 ITALDLEDNGMGAEGAWSVTEMLKANQQITTVNLSYNNLGPEGALAVAEMLEENKVITSI 234

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L+ N    S     A  L EN+T++ L L  N     GA  + KGL  N +LR L L  
Sbjct: 235 DLSGNHFGESDGVHFARVLKENTTLQELILKENEFRENGARLIGKGLVLNSTLRRLDLSW 294

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I ++G  A+ + +    G L  LD+  N  S  GA  +A  +K   +L  ++L  N I
Sbjct: 295 NHIRNKGALAICTAMKKNLG-LRDLDVSWNGFSDAGAIAMAATLKVNVTLTDLDLTNNRI 353

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNI-HSKGASAIARVLKD-NSVITSLDLAYN 453
           G  G   IA+AL  N+T+TT+ +G NN+ + +GA  +  + K+ NS ++ LDL  +
Sbjct: 354 GPTGVRAIANALLVNQTLTTLRMGKNNVPYEEGAILLKAIKKNKNSAMSQLDLTLD 409



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 36/269 (13%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +  L +   S+G  G RA+   ++     +  LD+ +N + A+GA+ V E +K  + +  
Sbjct: 147 VHRLRIRHRSLGPLGTRAICVPVAMSP-YITALDLEDNGMGAEGAWSVTEMLKANQQITT 205

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL  N++G EGA  +A+ L++N+ IT+IDL GN+         ARVLK+N+ +  L L 
Sbjct: 206 VNLSYNNLGPEGALAVAEMLEENKVITSIDLSGNHFGESDGVHFARVLKENTTLQELILK 265

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N    +GA+ + + L  +  +  L L W  I   GA  +   ++ N  +  LD+  NG 
Sbjct: 266 ENEFRENGARLIGKGLVLNSTLRRLDLSWNHIRNKGALAICTAMKKNLGLRDLDVSWNGF 325

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            D                                 GA  +A + K VN  LT +DL  N 
Sbjct: 326 SD--------------------------------AGAIAMAATLK-VNVTLTDLDLTNNR 352

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANN 600
           I   G  AIA AL  N+   +T+L +  N
Sbjct: 353 IGPTGVRAIANALLVNQ--TLTTLRMGKN 379



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 1/250 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L +    +G  G + +C  +  +  +  L L    +  EGA ++ E+LK N  +  + L+
Sbjct: 150 LRIRHRSLGPLGTRAICVPVAMSPYITALDLEDNGMGAEGAWSVTEMLKANQQITTVNLS 209

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N +   G  ++AE L EN  I S+ L+GN+ G       A+ L+ N +L+EL L  N  
Sbjct: 210 YNNLGPEGALAVAEMLEENKVITSIDLSGNHFGESDGVHFARVLKENTTLQELILKENEF 269

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            + G R +  GL      L  LD+  N I  KGA  +   +K    L  +++  N   D 
Sbjct: 270 RENGARLIGKGL-VLNSTLRRLDLSWNHIRNKGALAICTAMKKNLGLRDLDVSWNGFSDA 328

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  +A  LK N T+T +DL  N I   G  AIA  L  N  +T+L +  N +  +    
Sbjct: 329 GAIAMAATLKVNVTLTDLDLTNNRIGPTGVRAIANALLVNQTLTTLRMGKNNVPYEEGAI 388

Query: 463 LSEVLKFHGN 472
           L + +K + N
Sbjct: 389 LLKAIKKNKN 398



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 35/257 (13%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R  ++  L I + S+   G   +   +     +  ++L  N +G EGA  + + LK N+ 
Sbjct: 143 RMMRVHRLRIRHRSLGPLGTRAICVPVAMSPYITALDLEDNGMGAEGAWSVTEMLKANQQ 202

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           ITT++L  NN+  +GA A+A +L++N VITS+DL+ N  G       + VLK +  +  L
Sbjct: 203 ITTVNLSYNNLGPEGALAVAEMLEENKVITSIDLSGNHFGESDGVHFARVLKENTTLQEL 262

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L   +   +GA  +   L  N+T+  LDL  N +R+                       
Sbjct: 263 ILKENEFRENGARLIGKGLVLNSTLRRLDLSWNHIRN----------------------- 299

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                    +GA  +  + K  N  L  +D+++N   D GA A+A  LK N  V +T L+
Sbjct: 300 ---------KGALAICTAMKK-NLGLRDLDVSWNGFSDAGAIAMAATLKVN--VTLTDLD 347

Query: 597 LANNFLTKFGQSALTDA 613
           L NN +   G  A+ +A
Sbjct: 348 LTNNRIGPTGVRAIANA 364



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 2/228 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+     G EG + + E L  NQ    V+ + N +   G  A   +L+ N  + ++
Sbjct: 175 ITALDLEDNGMGAEGAWSVTEMLKANQQITTVNLSYNNLGPEGALAVAEMLEENKVITSI 234

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LSGN  G+        +L +N  ++ L L   + R+ GA+ I + L  NS LR L+L+ 
Sbjct: 235 DLSGNHFGESDGVHFARVLKENTTLQELILKENEFRENGARLIGKGLVLNSTLRRLDLSW 294

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++  A+ +N  +R L ++ N     GA A+A  L+ N +L +L L  N IG
Sbjct: 295 NHIRNKGALAICTAMKKNLGLRDLDVSWNGFSDAGAIAMAATLKVNVTLTDLDLTNNRIG 354

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSIS-AKGAFHVAEYIKNCKSLL 390
             G+RA+ + L   +  L  L +G N++   +GA  +    KN  S +
Sbjct: 355 PTGVRAIANALLVNQ-TLTTLRMGKNNVPYEEGAILLKAIKKNKNSAM 401



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 1/219 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E   ++ E  K  +  ++V++S  N G EG   +AE L  N+    +  + N    +   
Sbjct: 188 EGAWSVTEMLKANQQITTVNLSYNNLGPEGALAVAEMLEENKVITSIDLSGNHFGESDGV 247

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            F  VL+ N  L+ L L  N   + G + +   LV N+ + RL LS   +R++GA AI  
Sbjct: 248 HFARVLKENTTLQELILKENEFRENGARLIGKGLVLNSTLRRLDLSWNHIRNKGALAICT 307

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            +K N  LR L+++ N    +G  ++A  L  N T+  L L  N  G  G  A+A  L  
Sbjct: 308 AMKKNLGLRDLDVSWNGFSDAGAIAMAATLKVNVTLTDLDLTNNRIGPTGVRAIANALLV 367

Query: 329 NKSLRELHLHGNSIG-DEGIRALMSGLSSRKGKLAVLDI 366
           N++L  L +  N++  +EG   L +   ++   ++ LD+
Sbjct: 368 NQTLTTLRMGKNNVPYEEGAILLKAIKKNKNSAMSQLDL 406


>gi|29838811|gb|AAN57791.1| NOD2 [Mus musculus]
 gi|29838871|gb|AAN63037.1| NOD2 [Mus musculus]
 gi|29838955|gb|AAN59994.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 9/226 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 722 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 781

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 782 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 837

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 838 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 897

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            H N+  L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 898 DHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|115673327|ref|XP_798473.2| PREDICTED: leucine-rich repeat-containing protein 34-like
           [Strongylocentrotus purpuratus]
          Length = 363

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 145/309 (46%), Gaps = 11/309 (3%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+   + DE    L  +L +N  V  L +    + D+GA+ IAELLK    L+ L L  N
Sbjct: 12  LTDKMLQDEDAYVLLKVLANNTYVTGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCN 71

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G   +A  L  N T++ L LNGN  G  G  ALA  L+ N +L+ L L G++  D
Sbjct: 72  DLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQVNTALQSLDL-GDTDQD 130

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
                  + + +    L  L +      S   +   H A+ +K   +L  ++L   DI D
Sbjct: 131 TQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKD 190

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GAE++++ L +N  +  +DL  N I   GA  ++RVL  N+ +  LDL +N I  DGA 
Sbjct: 191 TGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPLEVLDLGHNCIEDDGAM 250

Query: 462 ALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
            LS  L   + N++TL +    I A G   +A  +  N   + + +  N   ++ C+   
Sbjct: 251 DLSRALTDMNSNLHTLVITSNNIRAPGLCAIASAMENNPNFNSVFIWGNHHEEDACNA-- 308

Query: 521 GLSFFHSAI 529
               FH  I
Sbjct: 309 ----FHRLI 313



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 14/227 (6%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N I+ KGA H+AE +K   +L  ++L  ND+G EG   IA+ L+ N T+  + L 
Sbjct: 38  LDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLN 97

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL----KLG 479
           GN I +KG  A+A VL+ N+ + SLDL           A + VL ++  +  L     L 
Sbjct: 98  GNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLL 157

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
           + Q   +   F A ML+ N+T++ L L+   ++D   +G   LS        LK++    
Sbjct: 158 FSQQEETTIHF-AKMLKVNSTLTELHLQKCDIKD---TGAERLSEMLVENIGLKYL---D 210

Query: 540 LCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           L  N ++  GAK L++   + N  L  +DL  N I DDGA  +++AL
Sbjct: 211 LACNKIRRDGAKYLSRVL-MKNTPLEVLDLGHNCIEDDGAMDLSRAL 256



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 127/288 (44%), Gaps = 33/288 (11%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           VL +N  +  L++  N I D+G + + ++L +   ++RL L   DL  EG   IA  L+ 
Sbjct: 28  VLANNTYVTGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQL 87

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG---------------NYGGAL 317
           N  L+ L+LN N I   G  +LA  L  N+ ++SL L                 NY   L
Sbjct: 88  NETLQELKLNGNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTL 147

Query: 318 GANAL----------------AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            A  +                AK L+ N +L ELHL    I D G   L   L    G L
Sbjct: 148 KALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIG-L 206

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTI 420
             LD+  N I   GA +++  +     L  ++L  N I D+GA  ++ AL   N  + T+
Sbjct: 207 KYLDLACNKIRRDGAKYLSRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNSNLHTL 266

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +  NNI + G  AIA  +++N    S+ +  N    D   A   +++
Sbjct: 267 VITSNNIRAPGLCAIASAMENNPNFNSVFIWGNHHEEDACNAFHRLIE 314



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +DM      D+G   +AE L      + +S   N +   G       LQ N  L+ L 
Sbjct: 36  TGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELK 95

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+GN IG++G   L  +L  N  ++ L L   D   +   A   +L  NS L+ L +N  
Sbjct: 96  LNGNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRP 155

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++           A+ L  NST+  LHL        GA  L++ L  N  L+ L L  N 
Sbjct: 156 LLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNK 215

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIG 400
           I  +G + L S +  +   L VLD+G+N I   GA  ++  + +  S L  + +  N+I 
Sbjct: 216 IRRDGAKYL-SRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNSNLHTLVITSNNIR 274

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             G   IA A++ N    ++ + GN+      +A  R+++  + +        P   DG 
Sbjct: 275 APGLCAIASAMENNPNFNSVFIWGNHHEEDACNAFHRLIEGGN-LEPEKTDVKPYVVDGQ 333

Query: 461 KALSEV 466
             LSE+
Sbjct: 334 VYLSEL 339



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 3/233 (1%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  KE  A   + +   + G EG   +A  L  N+T +E+    N I   G  A  GVLQ
Sbjct: 55  ELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQ 114

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKN 272
            N AL++L+L       + +     +L  N+ ++ L ++   L   ++E     A++LK 
Sbjct: 115 VNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKV 174

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS L  L L    I  +G   L+E L+EN  ++ L L  N     GA  L++ L  N  L
Sbjct: 175 NSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPL 234

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
             L L  N I D+G   L   L+     L  L I +N+I A G   +A  ++N
Sbjct: 235 EVLDLGHNCIEDDGAMDLSRALTDMNSNLHTLVITSNNIRAPGLCAIASAMEN 287



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 10/194 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS------FAANGITAAGIKAFDGVLQS 216
           A  S+D+   +   + +      L YN T + +       F+    T      F  +L+ 
Sbjct: 118 ALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTI---HFAKMLKV 174

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L+L    I D G + L ++LV+N G++ L L+   +R +GAK ++ +L  N+ L
Sbjct: 175 NSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPL 234

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            VL+L +N I+  G   L+ AL + NS + +L +  N   A G  A+A  +E N +   +
Sbjct: 235 EVLDLGHNCIEDDGAMDLSRALTDMNSNLHTLVITSNNIRAPGLCAIASAMENNPNFNSV 294

Query: 336 HLHGNSIGDEGIRA 349
            + GN   ++   A
Sbjct: 295 FIWGNHHEEDACNA 308



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 35/225 (15%)

Query: 420 IDLGGNN-------IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +++ GNN       +  + A  + +VL +N+ +T LD+ YN I   GA+ ++E+LK    
Sbjct: 3   MEMPGNNHLLTDKMLQDEDAYVLLKVLANNTYVTGLDMRYNQITDKGAEHIAELLKETCA 62

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           +  L L    +G  G   +A+ L+ N T+  L L  N + ++      G+   ++A+ SL
Sbjct: 63  LKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQVNTALQSL 122

Query: 533 ---------KHMLFYSLCINYLQGAKCLAQSFKV-----------------VNEALTSID 566
                    + M+ ++  +NY    K L  +  +                 VN  LT + 
Sbjct: 123 DLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELH 182

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
           L   +I+D GA  +++ L   E++ +  L+LA N + + G   L+
Sbjct: 183 LQKCDIKDTGAERLSEMLV--ENIGLKYLDLACNKIRRDGAKYLS 225


>gi|29427819|sp|Q8K3Z0.1|NOD2_MOUSE RecName: Full=Nucleotide-binding oligomerization domain-containing
            protein 2; AltName: Full=Caspase recruitment
            domain-containing protein 15
 gi|21702727|gb|AAM76073.1|AF520774_1 CARD15 [Mus musculus]
          Length = 1020

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 748  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 801

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 802  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 861

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 862  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 920

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 921  SMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 980

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 981  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1012



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 813  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 872

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 873  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLE 932

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 933  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 992

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 993  ILEVWLRGNTFSLEEIQT----LSSRDARL 1018



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 734 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 793

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 794 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 849

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 850 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 909

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GAE +A ML  N ++  L L  N + DE
Sbjct: 910 KWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHICDE 950



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 761  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 817

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 818  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 876

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 877  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKS 936

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 937  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 996

Query: 505  DLRAN 509
             LR N
Sbjct: 997  WLRGN 1001



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 828  LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 887

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 888  GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHI 947

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 948  CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 1001


>gi|399498042|emb|CCG20349.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDAFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 142/296 (47%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSVALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   +  A   LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKD--AFKLLNVNGNFISEEGVDELKE 489



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSVALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEG  AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +    + + L+++GN I +EG+  L
Sbjct: 463 VLHKDAFKLLNVNGNFISEEGVDEL 487


>gi|388502958|gb|AFK39545.1| unknown [Medicago truncatula]
          Length = 484

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 38/360 (10%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITAAGIKA---FDGVLQ 215
           +F+++  S R+FG +    +   L       +EV    F A    A  I+    F   L+
Sbjct: 153 SFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEAEAIEVMNIFSSALE 212

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             + L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA+AEL+     
Sbjct: 213 GAV-LRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPFTEK 271

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+VL  +NNM    G  ++A+ +  +  +     +    GA G  ALA+ L     L++L
Sbjct: 272 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 331

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N  G E   AL                             ++ I     L  I L 
Sbjct: 332 DLRDNMFGVEAGVAL-----------------------------SKVIPVFADLTEIYLS 362

Query: 396 MNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             ++ D+GAE +A+ALK++  ++  +D+ GN+I +K A ++A  +     +T L+L+ N 
Sbjct: 363 YLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENE 422

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +  +GA  +S+ L+  G ++ + L    I  SGA+ +A+ +       +L++ AN + DE
Sbjct: 423 LKDEGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDE 482



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 38/295 (12%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSSALEG-AVLRHLNLSNNAMGEKGVRAFRALLKSQ-NDLEELYLMNDGISEEAAKAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I   + L  ++ + N  GDEGA  IAD +K++  +         + ++G  A+A  L
Sbjct: 263 AELIPFTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+V+    ++  + L +  +   GAE +A+ L+ + 
Sbjct: 323 GACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            ++ ILD+  N +                   + K  +  + CI+  Q            
Sbjct: 383 PSLEILDMAGNDI-------------------TAKTAVSVAECISSKQ------------ 411

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              LT ++L+ NE++D+GA  I++AL+      ++ ++L+ N +T  G   L +A
Sbjct: 412 --FLTKLNLSENELKDEGAGLISKALEGLGQ--LSEVDLSTNLITWSGAKLLAEA 462



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 21/368 (5%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           E +K + E+LK     R  E N  +I   G  ++ E + + S  R   ++G       A+
Sbjct: 91  ESSKLMLEVLKRGP--RGKEENGELISEKGDAAV-ETVFDISGGRRAFIDGEE-----AS 142

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L K L G  S   +     S G +    +   L S K +L  +D+ ++ I+ +      
Sbjct: 143 ELLKPLMGPNSFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDL-SDFIAGRPEAEAI 201

Query: 381 EYIKNCKSLL------WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           E +    S L       +NL  N +G++G       LK    +  + L  + I  + A A
Sbjct: 202 EVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKA 261

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A ++     +  L    N  G +GA A+++V+K    +   +    ++GA G   +A+ 
Sbjct: 262 VAELIPFTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEA 321

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L     +  LDLR N     V +G   LS        L  +    L +    GA+ LA +
Sbjct: 322 LGACTHLKKLDLRDNMFG--VEAGV-ALSKVIPVFADLTEIYLSYLNLED-DGAEALANA 377

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
            K    +L  +D+A N+I    A ++A+ + + +   +T LNL+ N L   G   ++ A 
Sbjct: 378 LKESAPSLEILDMAGNDITAKTAVSVAECISSKQ--FLTKLNLSENELKDEGAGLISKAL 435

Query: 615 DLVYEMSE 622
           + + ++SE
Sbjct: 436 EGLGQLSE 443


>gi|29838643|gb|AAN52480.1| NOD2 [Mus musculus musculus]
 gi|29838655|gb|AAN52481.1| NOD2 [Mus musculus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 727 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPC 786

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 787 L----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 842

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 843 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 902

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GAE +A ML  N ++  L L  N + DE
Sbjct: 903 KWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHICDE 943



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|20467213|gb|AAM22460.1| CARD15-like protein [Homo sapiens]
          Length = 195

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 1/172 (0%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L GN  G  GA ALA  L+ N++L  L L GN++ D+G R++   L+S +  L++L +  
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNR-TLSMLHLQK 59

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           NSI   GA  +A+ +K  +SL  +    N IGD GA+ +A+ALK N+ + ++DL  N+I 
Sbjct: 60  NSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 119

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
             G +A+   L  N  + SL L  N I  +GA+A++  L  +  +  L L W
Sbjct: 120 DAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLQW 171



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 111/224 (49%), Gaps = 29/224 (12%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L GN IG +G K L D L  N  +  L L    +RD+GA+++AE L +N  L +L L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ N+ L  L L  NSI D
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISD 120

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G+ ALM  L +                              ++LL ++L  N I  EGA
Sbjct: 121 AGVAALMGALCTN-----------------------------QTLLSLSLRENSISPEGA 151

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + IA AL  N T+  +DL  N I +  A A+ + L+ N  +TSL
Sbjct: 152 QAIAHALCANSTLKNLDLQWNFIQAGAAQALGQALQLNRSLTSL 195



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 1/173 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L  
Sbjct: 1   LRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQK 59

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG  GA+++ADALKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I 
Sbjct: 60  NSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 119

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
             G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL+ N
Sbjct: 120 DAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLQWN 172



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 35/209 (16%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L  N  ++ L L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+ +++ LK + ++  L      IG  GA+ +A+ L+ N  +  LDL++N + D
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISD 120

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                       +  L GA C        N+ L S+ L  N I 
Sbjct: 121 A--------------------------GVAALMGALC-------TNQTLLSLSLRENSIS 147

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFL 602
            +GA AIA AL AN    + +L+L  NF+
Sbjct: 148 PEGAQAIAHALCANS--TLKNLDLQWNFI 174



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 88/174 (50%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L  L+L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L +N I  
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISD 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N I
Sbjct: 121 AGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLQWNFI 174



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 74/152 (48%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 22  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLK 81

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L  S N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 82  ELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSL 141

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
             N I   G  ++A AL  NST+++L L  N+
Sbjct: 142 RENSISPEGAQAIAHALCANSTLKNLDLQWNF 173



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 79/146 (54%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           NSI  +GA  +A+ +K  ++L  ++L  N + D+GA  +A+AL  NRT++ + L  N+I 
Sbjct: 4   NSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIG 63

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA  +A  LK N  +  L  + N IG  GAKAL+E LK +  + +L L    I  +G 
Sbjct: 64  PMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGV 123

Query: 489 EFVADMLRYNNTISILDLRANGLRDE 514
             +   L  N T+  L LR N +  E
Sbjct: 124 AALMGALCTNQTLLSLSLRENSISPE 149



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 92/192 (47%), Gaps = 35/192 (18%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L GN+I  +GA A+A  LK N  +TSL L  N +  DGA++++E L  +  ++ L L   
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
            IG  GA+ +AD L+ N                                SLK ++F S  
Sbjct: 61  SIGPMGAQRMADALKQN-------------------------------RSLKELMFSSNS 89

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
           I    GAK LA++ K VN+ L S+DL  N I D G  A+  AL  N+   + SL+L  N 
Sbjct: 90  IGD-GGAKALAEALK-VNQGLESLDLQSNSISDAGVAALMGALCTNQ--TLLSLSLRENS 145

Query: 602 LTKFGQSALTDA 613
           ++  G  A+  A
Sbjct: 146 ISPEGAQAIAHA 157


>gi|83977454|ref|NP_665856.2| nucleotide-binding oligomerization domain-containing protein 2 [Mus
            musculus]
 gi|29838775|gb|AAN57787.1| NOD2 [Mus musculus]
 gi|29838799|gb|AAN57789.1| NOD2 [Mus musculus]
 gi|29838859|gb|AAN63034.1| NOD2 [Mus musculus]
 gi|29839003|gb|AAN60735.1| NOD2 [Mus musculus molossinus]
 gi|29839015|gb|AAN60736.1| NOD2 [Mus musculus molossinus]
 gi|29839063|gb|AAN62470.1| NOD2 [Mus musculus]
 gi|29839075|gb|AAN62471.1| NOD2 [Mus musculus]
 gi|29839099|gb|AAN63035.1| NOD2 [Mus musculus]
 gi|29839135|gb|AAN63039.1| NOD2 [Mus musculus]
 gi|30017189|gb|AAN52477.1| NOD2 [Mus musculus]
 gi|195934835|gb|AAI68407.1| Nucleotide-binding oligomerization domain containing 2 [synthetic
            construct]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 9/226 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 722 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 781

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 782 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 837

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 838 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 897

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            H N+  L L    IG+ GAE +A ML  N ++  L L  N + DE
Sbjct: 898 DHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHICDE 943



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|348537652|ref|XP_003456307.1| PREDICTED: leucine-rich repeat-containing protein 34-like
           [Oreochromis niloticus]
          Length = 392

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 154/313 (49%), Gaps = 23/313 (7%)

Query: 222 TLNLSGN-----PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSI 275
           TL L GN      + D+ V  LC  L  N  V  L L    +++EG + +A+LL+   S 
Sbjct: 39  TLKLPGNVRQVQRLRDDDVLALCKCLRHNECVTGLDLRYNSIKNEGVEHLAKLLQEEKSS 98

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L+L  N I  +G   LA +L  N T+ SL L+GN  G  G   LA  L+ N +L+EL
Sbjct: 99  LSCLDLMFNDIQANGAQVLASSLQGNGTLLSLRLSGNKIGRGGGLELASMLQENCTLQEL 158

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN-- 393
            +    +    I AL+  L   K  L  +DI    + +    H  E+  +C  +L +N  
Sbjct: 159 EVADCDLDTSSIIALVIMLKKNKA-LCSVDISRPLLFS----HQEEWAVHCSKMLAVNSS 213

Query: 394 ---LYMNDIG--DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              L++  +G  D G E++ + L +N ++  +DL  N +   GA  +A +LK N  +  L
Sbjct: 214 LMELHLGRMGMTDTGIEQLTEGLGRNHSLRYLDLCSNRVTRDGAFHLAMMLKQNRALEIL 273

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLK-LGWCQ--IGASGAEFVADMLRYNNTISILD 505
           DL+ N IG  GA  LS+V+       TLK L  C+  I + G   +A  ++ ++T++ + 
Sbjct: 274 DLSSNQIGDGGAGYLSKVITC--PCCTLKELSVCRNNIASEGLLLLAQAVKSSSTLTHIY 331

Query: 506 LRANGLRDEVCSG 518
           +  N L + VC  
Sbjct: 332 IWGNHLEEPVCQA 344



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 7/311 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
             + +D+   +  +EG+  LA+ L   +++   +    N I A G +     LQ N  L 
Sbjct: 69  CVTGLDLRYNSIKNEGVEHLAKLLQEEKSSLSCLDLMFNDIQANGAQVLASSLQGNGTLL 128

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L LSGN IG  G   L  +L +N  ++ L+++  DL      A+  +LK N  L  +++
Sbjct: 129 SLRLSGNKIGRGGGLELASMLQENCTLQELEVADCDLDTSSIIALVIMLKKNKALCSVDI 188

Query: 282 NNNMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +  ++           ++ L  NS++  LHL        G   L +GL  N SLR L L 
Sbjct: 189 SRPLLFSHQEEWAVHCSKMLAVNSSLMELHLGRMGMTDTGIEQLTEGLGRNHSLRYLDLC 248

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMN 397
            N +  +G   L   L   +  L +LD+ +N I   GA ++++ I   C +L  +++  N
Sbjct: 249 SNRVTRDGAFHLAMMLKQNRA-LEILDLSSNQIGDGGAGYLSKVITCPCCTLKELSVCRN 307

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +I  EG   +A A+K + T+T I + GN++      A   ++    +        +P   
Sbjct: 308 NIASEGLLLLAQAVKSSSTLTHIYIWGNHLEEPVCQAFKELISSGRLHPE-QTDVSPYEV 366

Query: 458 DGAKALSEVLK 468
           DG   L+EV +
Sbjct: 367 DGHVFLAEVFQ 377



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 132/276 (47%), Gaps = 19/276 (6%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           AL K L  N+ +  L L  NSI +EG+  L   L   K  L+ LD+  N I A GA  +A
Sbjct: 59  ALCKCLRHNECVTGLDLRYNSIKNEGVEHLAKLLQEEKSSLSCLDLMFNDIQANGAQVLA 118

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             ++   +LL + L  N IG  G  ++A  L++N T+  +++   ++ +    A+  +LK
Sbjct: 119 SSLQGNGTLLSLRLSGNKIGRGGGLELASMLQENCTLQELEVADCDLDTSSIIALVIMLK 178

Query: 441 DNSVITSLDLAYNPI----GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            N  + S+D++  P+      + A   S++L  + ++  L LG   +  +G E + + L 
Sbjct: 179 KNKALCSVDIS-RPLLFSHQEEWAVHCSKMLAVNSSLMELHLGRMGMTDTGIEQLTEGLG 237

Query: 497 YNNTISILDLRANGL-RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ----GAKCL 551
            N+++  LDL +N + RD           FH A+   ++     L ++  Q    GA  L
Sbjct: 238 RNHSLRYLDLCSNRVTRD---------GAFHLAMMLKQNRALEILDLSSNQIGDGGAGYL 288

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           ++        L  + +  N I  +G   +AQA+K++
Sbjct: 289 SKVITCPCCTLKELSVCRNNIASEGLLLLAQAVKSS 324



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 11/213 (5%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           ++L  N I +EG E +A  L++ ++ ++ +DL  N+I + GA  +A  L+ N  + SL L
Sbjct: 73  LDLRYNSIKNEGVEHLAKLLQEEKSSLSCLDLMFNDIQANGAQVLASSLQGNGTLLSLRL 132

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           + N IG  G   L+ +L+ +  +  L++  C +  S    +  ML+ N  +  +D+    
Sbjct: 133 SGNKIGRGGGLELASMLQENCTLQELEVADCDLDTSSIIALVIMLKKNKALCSVDISRPL 192

Query: 511 L---RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
           L   ++E    C+ +   +S++  L H+    +      G + L +     N +L  +DL
Sbjct: 193 LFSHQEEWAVHCSKMLAVNSSLMEL-HLGRMGMTDT---GIEQLTEGLGR-NHSLRYLDL 247

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
             N +  DGAF +A  LK N   A+  L+L++N
Sbjct: 248 CSNRVTRDGAFHLAMMLKQNR--ALEILDLSSN 278


>gi|194670841|ref|XP_606462.4| PREDICTED: uncharacterized protein C14orf166B homolog [Bos taurus]
 gi|297479949|ref|XP_002691169.1| PREDICTED: uncharacterized protein C14orf166B homolog [Bos taurus]
 gi|296482882|tpg|DAA24997.1| TPA: ribonuclease inhibitor-like [Bos taurus]
          Length = 582

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 28/275 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++   +G+   G KA    L SN  + TL L+ N I +EG+  L ++L +N  +
Sbjct: 87  NMEESYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + + +S  DL  EGA+ ++E L+NN+                           S++ SL 
Sbjct: 147 QEMNVSDNDLGLEGARILSEFLQNNT---------------------------SSLFSLQ 179

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A    + L  N  ++ L L  N   D+    L   L+   G L  LD+  
Sbjct: 180 LSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVG-LQSLDLSW 238

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N +  +G   +   +++  SL  ++L MN  G+EGA  + + L+ N  +T +DL  NNI 
Sbjct: 239 NHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYLTYLDLSSNNIT 298

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           + G S I+R L+ N  +  L L  NPI  DGA  L
Sbjct: 299 NDGLSKISRALELNESLKVLKLFLNPISMDGAVLL 333



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 5/299 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T   +  A N IT  GI +   +LQ N  L+ +N
Sbjct: 91  SYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + L + L +N + +  LQLS  + ++E A+   + L NN  ++ L+L++
Sbjct: 151 VSDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N         L + L  N  ++SL L+ N+    G  AL  GL  N SL++L L  NS G
Sbjct: 211 NKFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+ +N+I+  G   ++  ++  +SL  + L++N I  +G
Sbjct: 271 NEGAAALGEVL-RLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDG 329

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPIGADGAK 461
           A  +  ++K+N      D+  +N+    +    ++L     I   LD+ Y  + A  AK
Sbjct: 330 AVLLILSIKRNPKSRMEDIDISNVLV--SEQFVKILDGVCAIHPQLDVIYKSVQAPSAK 386



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 41/320 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I +EGI +L+  L      L  +++
Sbjct: 93  INLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILSLVEMLQENY-YLQEMNV 151

Query: 367 GNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E+++N   SL  + L  N+  +E AE    AL  N  I ++DL  N
Sbjct: 152 SDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               K    + ++L  N  + SLDL++N +   G  AL   L+ + ++  L L     G 
Sbjct: 212 KFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N+ ++ LDL +N + ++      GLS    A+                
Sbjct: 272 EGAAALGEVLRLNSYLTYLDLSSNNITND------GLSKISRALE--------------- 310

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANN 600
                       +NE+L  + L  N I  DGA  +  ++K N     ED+ ++++ ++  
Sbjct: 311 ------------LNESLKVLKLFLNPISMDGAVLLILSIKRNPKSRMEDIDISNVLVSEQ 358

Query: 601 FLTKF-GQSALTDAKDLVYE 619
           F+    G  A+    D++Y+
Sbjct: 359 FVKILDGVCAIHPQLDVIYK 378



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + LN++ +  +G  ++A AL+ N+T+ +L L  N     G  +L + L+ N  L+E+++ 
Sbjct: 93  INLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILSLVEMLQENYYLQEMNVS 152

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G EG R L   L +    L  L +  N+   + A    + + N   +  ++L  N 
Sbjct: 153 DNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNK 212

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             D+  E +   L  N  + ++DL  N+++ +G  A+   L+ N  +  LDL+ N  G +
Sbjct: 213 FCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNE 272

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           GA AL EVL+ +  +  L L    I   G   ++  L  N ++ +L L  N +
Sbjct: 273 GAAALGEVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPI 325



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 17/247 (6%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   +INL  + +G  G + IA AL  N T+ T++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ LSE L+ +  ++ +L+L         AE    
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL----KHMLFYSLCINYLQGAK 549
            L  N  I  LDL  N   D+       +   +  + SL     H+        Y++G  
Sbjct: 196 ALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVGLQSLDLSWNHL--------YIRGVV 247

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
            L    +  N +L  +DL+ N   ++GA A+ + L+ N    +T L+L++N +T  G S 
Sbjct: 248 ALCNGLR-SNVSLKKLDLSMNSFGNEGAAALGEVLRLNS--YLTYLDLSSNNITNDGLSK 304

Query: 610 LTDAKDL 616
           ++ A +L
Sbjct: 305 ISRALEL 311



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 1/162 (0%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + L+EF +    +  S+ +SG NF +E      ++L  N   + +  + N       
Sbjct: 159 EGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L++L+LS N +   GV  LC+ L  N  +++L LS     +EGA A+ 
Sbjct: 219 EYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           E+L+ NS L  L+L++N I   G + ++ AL  N +++ L L
Sbjct: 279 EVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKL 320


>gi|156353814|ref|XP_001623106.1| predicted protein [Nematostella vectensis]
 gi|156209767|gb|EDO31006.1| predicted protein [Nematostella vectensis]
          Length = 550

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 29/285 (10%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +  +I  K +++  + +G  G K +   L++N  +  L +    +  +G   +A+LLK N
Sbjct: 145 IMEHITTKAVDIKHHGLGPSGAKAIVTALMNNTTIASLNIRDCGIGSDGGVEVAKLLKEN 204

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L++  N +  SG  + AE + +N+ + SL+L  N      A   A+ L  N +L+
Sbjct: 205 CYITELDVAQNKLKTSGACAFAEVIQDNNVVTSLNLAWNEFNNHDAARFAEALRTNHTLK 264

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L                             D+  N    +   ++   I     L ++N
Sbjct: 265 RL-----------------------------DLSRNKFEEQAGIYLGPAIDANDGLEYLN 295

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +   GA   A  L+ N ++  +DL  N    +GA A+   LKDN+ +  LDL+YN
Sbjct: 296 LSWNHLRGPGAIAFAKGLRANCSLQVLDLSWNGFADEGAHAVGESLKDNNTLLELDLSYN 355

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            I   GA AL+E LK +  +  LK+G   I   GA  + D +R N
Sbjct: 356 RITCKGALALAEGLKINNTLKVLKIGMNMIQNKGANALLDAMRNN 400



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 9/222 (4%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +++  + +G  GA+ I  AL  N TI ++++    I S G   +A++LK+N  IT LD+A
Sbjct: 154 VDIKHHGLGPSGAKAIVTALMNNTTIASLNIRDCGIGSDGGVEVAKLLKENCYITELDVA 213

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +   GA A +EV++ +  + +L L W +     A   A+ LR N+T+  LDL  N  
Sbjct: 214 QNKLKTSGACAFAEVIQDNNVVTSLNLAWNEFNNHDAARFAEALRTNHTLKRLDLSRNKF 273

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAFN 570
            ++      G+ +   AI +   + + +L  N+L+G   +A +  +  N +L  +DL++N
Sbjct: 274 EEQA-----GI-YLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKGLRANCSLQVLDLSWN 327

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
              D+GA A+ ++LK N    +  L+L+ N +T  G  AL +
Sbjct: 328 GFADEGAHAVGESLKDNN--TLLELDLSYNRITCKGALALAE 367



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 1/258 (0%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F  E     +VD+     G  G   +  +L  N T   ++    GI + G      +L+ 
Sbjct: 144 FIMEHITTKAVDIKHHGLGPSGAKAIVTALMNNTTIASLNIRDCGIGSDGGVEVAKLLKE 203

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  +  L+++ N +   G     +++ DN  V  L L+  +  +  A   AE L+ N  L
Sbjct: 204 NCYITELDVAQNKLKTSGACAFAEVIQDNNVVTSLNLAWNEFNNHDAARFAEALRTNHTL 263

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           + L+L+ N  +      L  A+  N  +  L+L+ N+    GA A AKGL  N SL+ L 
Sbjct: 264 KRLDLSRNKFEEQAGIYLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKGLRANCSLQVLD 323

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N   DEG  A+   L      L  LD+  N I+ KGA  +AE +K   +L  + + M
Sbjct: 324 LSWNGFADEGAHAVGESLKD-NNTLLELDLSYNRITCKGALALAEGLKINNTLKVLKIGM 382

Query: 397 NDIGDEGAEKIADALKQN 414
           N I ++GA  + DA++ N
Sbjct: 383 NMIQNKGANALLDAMRNN 400


>gi|156381140|ref|XP_001632124.1| predicted protein [Nematostella vectensis]
 gi|156219175|gb|EDO40061.1| predicted protein [Nematostella vectensis]
          Length = 366

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 181/405 (44%), Gaps = 43/405 (10%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   ++  L  N    E+     GI  +G +A    +Q N+ L  L++S NPIG  
Sbjct: 1   IGDLGAQRISNGLALNTKVTELILVDAGIGPSGTQALAKAIQ-NVTL--LDMSINPIGLA 57

Query: 234 GVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           G+  + +IL DN+  ++ L L    +   GA++I++ L  N+ L  L L  N ID  G  
Sbjct: 58  GLNAIANILQDNSCRLKTLILDGCGINMFGARSISKALSKNTSLEKLSLACNNIDDEGMC 117

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                                       ALAK +   KSL+ L +  N I D G +A++ 
Sbjct: 118 ----------------------------ALAKYVTKTKSLQSLDISYNHISDVGKKAIID 149

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
             S     L+   I + SI    A  +AE +    +L  I +    +GD G + IA+ALK
Sbjct: 150 ACSENNSTLSTFHIHSPSIDDNCAIALAEVLSGNTTLTDIYIGGEILGDAGVQYIAEALK 209

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD--LAYNPIGADGAKALSEVLKFH 470
            N TI T+ +    +      A   +L+ N+ IT L    ++  I   GA+ +S+ L  +
Sbjct: 210 FNTTIRTLAINPGRVTPDAGQAFGEMLRHNNTITRLTSIHSHGNIVDLGAQRISDGLALN 269

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS-FFHSAI 529
             +  L L    IG SG   +A  ++    +++LD+ AN +  E   G N ++       
Sbjct: 270 TKVTELTLVNAGIGPSGTRALAKAIQ---NVTLLDMSANPIGLE---GLNAIANILQDNS 323

Query: 530 YSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
             LK ++    CIN + GA+ ++++    N +L  + LA N I D
Sbjct: 324 CRLKSLILDGCCIN-MDGARSISKALS-KNTSLEKLSLACNNIGD 366



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 165/360 (45%), Gaps = 33/360 (9%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQ 215
            AK ++  + +DMS    G  GL  +A  L  N    + +     GI   G ++    L 
Sbjct: 37  LAKAIQNVTLLDMSINPIGLAGLNAIANILQDNSCRLKTLILDGCGINMFGARSISKALS 96

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNS 274
            N +L+ L+L+ N I DEG+  L   +     ++ L +S   + D G KAI +   +NNS
Sbjct: 97  KNTSLEKLSLACNNIDDEGMCALAKYVTKTKSLQSLDISYNHISDVGKKAIIDACSENNS 156

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L    +++  ID +   +LAE L  N+T+  +++ G   G  G   +A+ L+ N ++R 
Sbjct: 157 TLSTFHIHSPSIDDNCAIALAEVLSGNTTLTDIYIGGEILGDAGVQYIAEALKFNTTIRT 216

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L ++   +  +  +A    L             NN+I+   + H                
Sbjct: 217 LAINPGRVTPDAGQAFGEMLRH-----------NNTITRLTSIH---------------- 249

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
              +I D GA++I+D L  N  +T + L    I   G  A+A+ +++   +T LD++ NP
Sbjct: 250 SHGNIVDLGAQRISDGLALNTKVTELTLVNAGIGPSGTRALAKAIQN---VTLLDMSANP 306

Query: 455 IGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           IG +G  A++ +L+ +   + +L L  C I   GA  ++  L  N ++  L L  N + D
Sbjct: 307 IGLEGLNAIANILQDNSCRLKSLILDGCCINMDGARSISKALSKNTSLEKLSLACNNIGD 366



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 181/391 (46%), Gaps = 57/391 (14%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IGD G + + + L  N  V  L L    +   G +A+A+ ++N   + +L+++ N I  +
Sbjct: 1   IGDLGAQRISNGLALNTKVTELILVDAGIGPSGTQALAKAIQN---VTLLDMSINPIGLA 57

Query: 290 GFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           G  ++A  L +NS  +++L L+G      GA +++K L  N SL +L L  N+I DEG+ 
Sbjct: 58  GLNAIANILQDNSCRLKTLILDGCGINMFGARSISKALSKNTSLEKLSLACNNIDDEGMC 117

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL                             A+Y+   KSL  +++  N I D G + I 
Sbjct: 118 AL-----------------------------AKYVTKTKSLQSLDISYNHISDVGKKAII 148

Query: 409 DALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           DA  +N  T++T  +   +I    A A+A VL  N+ +T + +    +G  G + ++E L
Sbjct: 149 DACSENNSTLSTFHIHSPSIDDNCAIALAEVLSGNTTLTDIYIGGEILGDAGVQYIAEAL 208

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS----------ILDLRANGLRDEVC- 516
           KF+  I TL +   ++     +   +MLR+NNTI+          I+DL A  + D +  
Sbjct: 209 KFNTTIRTLAINPGRVTPDAGQAFGEMLRHNNTITRLTSIHSHGNIVDLGAQRISDGLAL 268

Query: 517 -SGCNGLSFFHSAI---------YSLKHMLFYSLCINY--LQGAKCLAQSFKVVNEALTS 564
            +    L+  ++ I          +++++    +  N   L+G   +A   +  +  L S
Sbjct: 269 NTKVTELTLVNAGIGPSGTRALAKAIQNVTLLDMSANPIGLEGLNAIANILQDNSCRLKS 328

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           + L    I  DGA +I++AL  N  +   SL
Sbjct: 329 LILDGCCINMDGARSISKALSKNTSLEKLSL 359



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 38/227 (16%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           K  ++  ++     S+  +   +  D     LAE L  N T  ++      +  AG++  
Sbjct: 145 KAIIDACSENNSTLSTFHIHSPSIDDNCAIALAEVLSGNTTLTDIYIGGEILGDAGVQYI 204

Query: 211 DGVLQSNIALKTLNLSGNP--------------------------------IGDEGVKCL 238
              L+ N  ++TL +  NP                                I D G + +
Sbjct: 205 AEALKFNTTIRTLAI--NPGRVTPDAGQAFGEMLRHNNTITRLTSIHSHGNIVDLGAQRI 262

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
            D L  N  V  L L +  +   G +A+A+ ++N   + +L+++ N I   G  ++A  L
Sbjct: 263 SDGLALNTKVTELTLVNAGIGPSGTRALAKAIQN---VTLLDMSANPIGLEGLNAIANIL 319

Query: 299 LENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +NS  ++SL L+G      GA +++K L  N SL +L L  N+IGD
Sbjct: 320 QDNSCRLKSLILDGCCINMDGARSISKALSKNTSLEKLSLACNNIGD 366


>gi|428179394|gb|EKX48265.1| hypothetical protein GUITHDRAFT_136783 [Guillardia theta CCMP2712]
          Length = 502

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 169/349 (48%), Gaps = 11/349 (3%)

Query: 135 GTNLLSGFTGKLFRESKQTLNE-FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           G ++L+     + RE  ++L++  A+       +++ G   G  G+  L+ +L + +   
Sbjct: 110 GPSVLNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGRMGISRLSVALTHCRNLT 169

Query: 194 EVSFAANGITAAGIKAFDGVLQSNI---ALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
            +S   N I   GI    G L S++    L+ L+LS N IG EG   L  +L   + +E 
Sbjct: 170 FLSLGRNLIGDKGI----GHLVSSLLFCPLQHLDLSINYIGAEGAAKLASVLPHLSMLEV 225

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L+DEG + I+++L    +L+ L+L+ N I   G   LA AL   + +RSL+L 
Sbjct: 226 LILFGNPLKDEGVEKISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSCTRLRSLNLR 285

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           GN  G LG   L+       ++ EL L  NSI  +G  +L   L      +  LD+  N 
Sbjct: 286 GNALGDLGVKLLSWATPQCLAMTELDLSRNSITADGASSLCRKLV--PDVIVNLDLAGNF 343

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           +  +GA  +A  +K+C SL  + L    +G +G +++   L+ N++++ + LG N+I   
Sbjct: 344 LGEEGAMALALSLKSCTSLSRLELSRCRLGCQGIKRLI-PLRHNQSLSHLGLGLNDIGDS 402

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           G  A+   L D   +  LDL  N I   GA  L        ++ TL LG
Sbjct: 403 GVEALLPCLSDMHCLKWLDLCGNGITDQGASLLCSQFTSLLSLETLNLG 451



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 154/322 (47%), Gaps = 33/322 (10%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            LNL  + I  EG + L   L    G ++RL+L    +   G   ++  L +   L  L 
Sbjct: 113 VLNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGRMGISRLSVALTHCRNLTFLS 172

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N+I   G   L  +LL    ++ L L+ NY GA GA  LA  L     L  L L GN
Sbjct: 173 LGRNLIGDKGIGHLVSSLL-FCPLQHLDLSINYIGAEGAAKLASVLPHLSMLEVLILFGN 231

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            + DEG+   +S +  +   L  LD+  N I A+GA  +A  + +C  L  +NL  N +G
Sbjct: 232 PLKDEGVEK-ISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSCTRLRSLNLRGNALG 290

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D G + ++ A  Q   +T +DL  N+I + GAS++ R L  + VI +LDLA N +G +GA
Sbjct: 291 DLGVKLLSWATPQCLAMTELDLSRNSITADGASSLCRKLVPD-VIVNLDLAGNFLGEEGA 349

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS------------------ 502
            AL+  LK   +++ L+L  C++G  G + +   LR+N ++S                  
Sbjct: 350 MALALSLKSCTSLSRLELSRCRLGCQGIKRLIP-LRHNQSLSHLGLGLNDIGDSGVEALL 408

Query: 503 ----------ILDLRANGLRDE 514
                      LDL  NG+ D+
Sbjct: 409 PCLSDMHCLKWLDLCGNGITDQ 430



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 158/335 (47%), Gaps = 12/335 (3%)

Query: 278 VLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           VL L ++ I   G  SL++AL     TI+ L L+GNY G +G + L+  L   ++L  L 
Sbjct: 113 VLNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGRMGISRLSVALTHCRNLTFLS 172

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD+GI  L+S L      L  LD+  N I A+GA  +A  + +   L  + L+ 
Sbjct: 173 LGRNLIGDKGIGHLVSSLLF--CPLQHLDLSINYIGAEGAAKLASVLPHLSMLEVLILFG 230

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N + DEG EKI+  L Q   +  +DL  N I ++GA  +A  L   + + SL+L  N +G
Sbjct: 231 NPLKDEGVEKISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSCTRLRSLNLRGNALG 290

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
             G K LS        +  L L    I A GA  +   L   + I  LDL  N L +E  
Sbjct: 291 DLGVKLLSWATPQCLAMTELDLSRNSITADGASSLCRKL-VPDVIVNLDLAGNFLGEE-- 347

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
            G   L+    +  SL   L  S C    QG K L       N++L+ + L  N+I D G
Sbjct: 348 -GAMALALSLKSCTSLSR-LELSRCRLGCQGIKRLIPLRH--NQSLSHLGLGLNDIGDSG 403

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
             A+   L  ++   +  L+L  N +T  G S L 
Sbjct: 404 VEALLPCL--SDMHCLKWLDLCGNGITDQGASLLC 436



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 143/326 (43%), Gaps = 33/326 (10%)

Query: 171 GRNF-GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           GRN  GD+G+  L  SL +    + +  + N I A G      VL     L+ L L GNP
Sbjct: 174 GRNLIGDKGIGHLVSSLLFCPL-QHLDLSINYIGAEGAAKLASVLPHLSMLEVLILFGNP 232

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL---------- 279
           + DEGV+ +  +L+    ++RL LS   +  EGA  +A  L + + LR L          
Sbjct: 233 LKDEGVEKISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSCTRLRSLNLRGNALGDL 292

Query: 280 ------------------ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
                             +L+ N I   G +SL   L+ +  I +L L GN+ G  GA A
Sbjct: 293 GVKLLSWATPQCLAMTELDLSRNSITADGASSLCRKLVPD-VIVNLDLAGNFLGEEGAMA 351

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA  L+   SL  L L    +G +GI+ L+         L+ L +G N I   G   +  
Sbjct: 352 LALSLKSCTSLSRLELSRCRLGCQGIKRLIP--LRHNQSLSHLGLGLNDIGDSGVEALLP 409

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + +   L W++L  N I D+GA  +        ++ T++LGGNN    G   + +  K+
Sbjct: 410 CLSDMHCLKWLDLCGNGITDQGASLLCSQFTSLLSLETLNLGGNNFSLAGVDKLRKAAKE 469

Query: 442 NSVITSLDLAYNPIGADGAKALSEVL 467
              + +L +       +G+  LS  L
Sbjct: 470 ARSLRTLIIGSEGNWDEGSGLLSVAL 495



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 7/273 (2%)

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
           GG + +  +   +EG K    L+L  + I  EG  +L   L+   G +  L++  N +  
Sbjct: 93  GGIVDSLIVPAVIEGWKGPSVLNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGR 152

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            G   ++  + +C++L +++L  N IGD+G   +  +L     +  +DL  N I ++GA+
Sbjct: 153 MGISRLSVALTHCRNLTFLSLGRNLIGDKGIGHLVSSLLFC-PLQHLDLSINYIGAEGAA 211

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            +A VL   S++  L L  NP+  +G + +S+VL     +  L L    IGA GA  +A 
Sbjct: 212 KLASVLPHLSMLEVLILFGNPLKDEGVEKISKVLLQCFLLQRLDLSVNGIGAEGAGRLAL 271

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L     +  L+LR N L D       G+     A      M    L  N +      + 
Sbjct: 272 ALPSCTRLRSLNLRGNALGDL------GVKLLSWATPQCLAMTELDLSRNSITADGASSL 325

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
             K+V + + ++DLA N + ++GA A+A +LK+
Sbjct: 326 CRKLVPDVIVNLDLAGNFLGEEGAMALALSLKS 358



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 5/164 (3%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D++G   G+EG   LA SL    +   +  +   +   GIK     L+ N +L  L L 
Sbjct: 337 LDLAGNFLGEEGAMALALSLKSCTSLSRLELSRCRLGCQGIKRLI-PLRHNQSLSHLGLG 395

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD GV+ L   L D   ++ L L    + D+GA  +     +   L  L L  N  
Sbjct: 396 LNDIGDSGVEALLPCLSDMHCLKWLDLCGNGITDQGASLLCSQFTSLLSLETLNLGGNNF 455

Query: 287 DYSGFTSLAEALLENSTIRSLHL--NGNY--GGALGANALAKGL 326
             +G   L +A  E  ++R+L +   GN+  G  L + AL  G+
Sbjct: 456 SLAGVDKLRKAAKEARSLRTLIIGSEGNWDEGSGLLSVALPCGI 499


>gi|428320905|ref|YP_007118787.1| leucine-rich repeat, ribonuclease inhibitor subtype [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244585|gb|AFZ10371.1| leucine-rich repeat, ribonuclease inhibitor subtype [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 387

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 138/290 (47%), Gaps = 19/290 (6%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    +G  G   +   L +N  +  L L +  + D GA+ +A L++ N+ L ++ L 
Sbjct: 55  LDLCKQDLGVMGCHLVTQALANNDAIASLLLGTNGIGDRGAQDVARLIQRNNRLEIVYLG 114

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  +LA AL +N +I  L L  N  G  GA+ LA+ L  N S+R L L    I
Sbjct: 115 CNAISSTGIAALAAALTQNQSITGLWLKRNPIGPEGADRLAEMLRHNTSIRTLDLVNTQI 174

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GDEG+ A++  L+     +  L +G N I    A  +A  + +   +  + L +N +GD 
Sbjct: 175 GDEGLAAILEVLTYTNRTVERLYLGGNQIQENHAALLANLLADNPVITGLFLNVNHLGDR 234

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP-IGADGAK 461
           G   + D L +N+T+  + L  N I   G + +   +  +  +++LDL Y+P  G  GA+
Sbjct: 235 GVTVLVDGLAENKTLVDLGLASNGIGVAGCNPLLAAVATHPKLSNLDLGYSPSTGVLGAQ 294

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
                               QIG  GA  +A  +  N T+  L+L  NG+
Sbjct: 295 P------------------NQIGDIGASAIAHSIARNQTLLKLNLCRNGI 326



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 128/274 (46%), Gaps = 13/274 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A +S+ +     GD G   +A  +  N   E V    N I++ GI A    L  N ++  
Sbjct: 79  AIASLLLGTNGIGDRGAQDVARLIQRNNRLEIVYLGCNAISSTGIAALAAALTQNQSITG 138

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLEL 281
           L L  NPIG EG   L ++L  N  +  L L +  + DEG  AI E+L   N  +  L L
Sbjct: 139 LWLKRNPIGPEGADRLAEMLRHNTSIRTLDLVNTQIGDEGLAAILEVLTYTNRTVERLYL 198

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I  +    LA  L +N  I  L LN N+ G  G   L  GL  NK+L +L L  N 
Sbjct: 199 GGNQIQENHAALLANLLADNPVITGLFLNVNHLGDRGVTVLVDGLAENKTLVDLGLASNG 258

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIG-----------NNSISAKGAFHVAEYIKNCKSLL 390
           IG  G   L++ +++   KL+ LD+G            N I   GA  +A  I   ++LL
Sbjct: 259 IGVAGCNPLLAAVATHP-KLSNLDLGYSPSTGVLGAQPNQIGDIGASAIAHSIARNQTLL 317

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +NL  N IG+ G + +  AL+ N+ +  + L G
Sbjct: 318 KLNLCRNGIGNLGKKALIAALEINQKLRYLILDG 351



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 37/288 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+    +   G   V + + N  ++  + L  N IGD GA+ +A  +++N  +  + LG
Sbjct: 55  LDLCKQDLGVMGCHLVTQALANNDAIASLLLGTNGIGDRGAQDVARLIQRNNRLEIVYLG 114

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I S G +A+A  L  N  IT L L  NPIG +GA  L+E+L+ + +I TL L   QI
Sbjct: 115 CNAISSTGIAALAAALTQNQSITGLWLKRNPIGPEGADRLAEMLRHNTSIRTLDLVNTQI 174

Query: 484 GASGAEFVADMLRYNN-TISILDLRANGLRD-------------EVCSGC---------N 520
           G  G   + ++L Y N T+  L L  N +++              V +G           
Sbjct: 175 GDEGLAAILEVLTYTNRTVERLYLGGNQIQENHAALLANLLADNPVITGLFLNVNHLGDR 234

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAF---------- 569
           G++     +   K ++   L  N +  A C      V  +  L+++DL +          
Sbjct: 235 GVTVLVDGLAENKTLVDLGLASNGIGVAGCNPLLAAVATHPKLSNLDLGYSPSTGVLGAQ 294

Query: 570 -NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            N+I D GA AIA ++  N+   +  LNL  N +   G+ AL  A ++
Sbjct: 295 PNQIGDIGASAIAHSIARNQ--TLLKLNLCRNGIGNLGKKALIAALEI 340



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 91/215 (42%), Gaps = 14/215 (6%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGI 207
           E    L E  +   +  ++D+     GDEGL  + E L Y N+T E +    N I     
Sbjct: 149 EGADRLAEMLRHNTSIRTLDLVNTQIGDEGLAAILEVLTYTNRTVERLYLGGNQIQENHA 208

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
                +L  N  +  L L+ N +GD GV  L D L +N  +  L L+S  +   G   + 
Sbjct: 209 ALLANLLADNPVITGLFLNVNHLGDRGVTVLVDGLAENKTLVDLGLASNGIGVAGCNPLL 268

Query: 268 ELLKNNSILRVLEL-----------NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             +  +  L  L+L             N I   G +++A ++  N T+  L+L  N  G 
Sbjct: 269 AAVATHPKLSNLDLGYSPSTGVLGAQPNQIGDIGASAIAHSIARNQTLLKLNLCRNGIGN 328

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           LG  AL   LE N+ LR L L G    D  I  L+
Sbjct: 329 LGKKALIAALEINQKLRYLILDGQP--DRRIEVLL 361


>gi|301756847|ref|XP_002914276.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
            domain-containing protein 2-like [Ailuropoda melanoleuca]
          Length = 1232

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 192/412 (46%), Gaps = 29/412 (7%)

Query: 104  VLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGF-TGKLFRESKQTLNEFAKELR 162
            +L +L+  + +P+P RP    A  +  +      + + F  G L RE    L E     R
Sbjct: 835  LLARLLPPMCVPRPERPDGGDAALLQEAEPHNLQITAAFLAGLLSREHGGLLAECQVSER 894

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A        R  G  G   L+ SL  ++    +  A  G  A  +  F  +++S   ++ 
Sbjct: 895  ALLQ-----RQAGARGC--LSRSL--HEHFHSIPAAVPGXHA--MPGFVWLIRSLYEMQE 943

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
              L+   +   G+K           V  L+L+   +      A+A +L++      L+L+
Sbjct: 944  ERLAREAV--RGLK-----------VGHLKLTFCGVGPAECAALAFVLRHLRRPMALQLD 990

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +N +   G   L   L   S  ++L+L  N     G   L +     + L++L L  N +
Sbjct: 991  HNSVGDVGVEQLLPCL---SVCKALYLRDNNISDRGVCKLVEHAIHCQQLQKLALFNNKL 1047

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             D    +L   L+ ++  LA L +GNN I+A GA  +AE ++   SL ++ L+ N +GDE
Sbjct: 1048 TDGCAHSLARLLACKRNFLA-LRLGNNHITAAGAQVLAEGLRANGSLQFLGLWGNKVGDE 1106

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            GA+ +A+AL+ ++++  + L GNNI S+GA A+A +L+ N  +  L L  N +  +G  +
Sbjct: 1107 GAQALAEALRDHQSLRWLSLVGNNIGSRGAQALALMLEKNVALEELCLEENHLQDEGVCS 1166

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            L++ L+ +  +  LKL    I   GAE +   L  N+TI  + LR N    E
Sbjct: 1167 LAKGLERNSRLKVLKLSNNYITYLGAEALLRALERNDTILEVWLRGNTFSPE 1218



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 84/151 (55%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N ITAAG +     L++N +L+ L L GN +GDEG + L + L D+  +  L L   ++ 
Sbjct: 1073 NHITAAGAQVLAEGLRANGSLQFLGLWGNKVGDEGAQALAEALRDHQSLRWLSLVGNNIG 1132

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
              GA+A+A +L+ N  L  L L  N +   G  SLA+ L  NS ++ L L+ NY   LGA
Sbjct: 1133 SRGAQALALMLEKNVALEELCLEENHLQDEGVCSLAKGLERNSRLKVLKLSNNYITYLGA 1192

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             AL + LE N ++ E+ L GN+   E I  L
Sbjct: 1193 EALLRALERNDTILEVWLRGNTFSPEEIERL 1223



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 4/265 (1%)

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
            G+  A   A   VL+       L L  N +GD GV+ L   L   +  + L L   ++ D
Sbjct: 965  GVGPAECAALAFVLRHLRRPMALQLDHNSVGDVGVEQLLPCL---SVCKALYLRDNNISD 1021

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
             G   + E   +   L+ L L NN +      SLA  L       +L L  N+  A GA 
Sbjct: 1022 RGVCKLVEHAIHCQQLQKLALFNNKLTDGCAHSLARLLACKRNFLALRLGNNHITAAGAQ 1081

Query: 321  ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
             LA+GL  N SL+ L L GN +GDEG +AL   L   +  L  L +  N+I ++GA  +A
Sbjct: 1082 VLAEGLRANGSLQFLGLWGNKVGDEGAQALAEALRDHQ-SLRWLSLVGNNIGSRGAQALA 1140

Query: 381  EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
              ++   +L  + L  N + DEG   +A  L++N  +  + L  N I   GA A+ R L+
Sbjct: 1141 LMLEKNVALEELCLEENHLQDEGVCSLAKGLERNSRLKVLKLSNNYITYLGAEALLRALE 1200

Query: 441  DNSVITSLDLAYNPIGADGAKALSE 465
             N  I  + L  N    +  + L +
Sbjct: 1201 RNDTILEVWLRGNTFSPEEIERLGQ 1225



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 27/313 (8%)

Query: 305  RSLH--LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            RSLH   +       G +A+   +   +SL E+      +  E +R L  G      KL 
Sbjct: 909  RSLHEHFHSIPAAVPGXHAMPGFVWLIRSLYEMQ--EERLAREAVRGLKVG----HLKLT 962

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               +G    +A     +A  +++ +  + + L  N +GD G E++   L   + +   D 
Sbjct: 963  FCGVGPAECAA-----LAFVLRHLRRPMALQLDHNSVGDVGVEQLLPCLSVCKALYLRD- 1016

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              NNI  +G   +         +  L L  N +    A +L+ +L    N   L+LG   
Sbjct: 1017 --NNISDRGVCKLVEHAIHCQQLQKLALFNNKLTDGCAHSLARLLACKRNFLALRLGNNH 1074

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
            I A+GA+ +A+ LR N ++  L L  N + DE      G      A+   + + + SL  
Sbjct: 1075 ITAAGAQVLAEGLRANGSLQFLGLWGNKVGDE------GAQALAEALRDHQSLRWLSLVG 1128

Query: 543  NYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
            N +  +GA+ LA   +  N AL  + L  N ++D+G  ++A+ L+ N  + V  L L+NN
Sbjct: 1129 NNIGSRGAQALALMLEK-NVALEELCLEENHLQDEGVCSLAKGLERNSRLKV--LKLSNN 1185

Query: 601  FLTKFGQSALTDA 613
            ++T  G  AL  A
Sbjct: 1186 YITYLGAEALLRA 1198


>gi|401423736|ref|XP_003876354.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322492596|emb|CBZ27873.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 473

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 29/308 (9%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LK 221
           A   + ++      EG   +A++L  N     +  + N +  +G +   G+L+++++ L+
Sbjct: 160 ALKRLGLASNRLDPEGAALVAKALERNTYLSSLDLSVNELGPSGAECLAGILRTSVSVLQ 219

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G  GV  +CD +  N  ++RL L +    DE A  IA +L+ N  L  L++
Sbjct: 220 VLQLHGNYLGPTGVIAICDAVKTNRELKRLTLGNNHATDEAAGGIAAMLEANETLEELDI 279

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +  +G  ++A+                           +GL  N SL  L L GN 
Sbjct: 280 RLNTLTANGVRTIAQ---------------------------QGLAKNTSLAVLSLSGNE 312

Query: 342 IGDEGIRALMSGLSS-RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +G  G   L   L+S ++  L  LD+ +  ++A G F VA  +    SL  INL  N + 
Sbjct: 313 VGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLLSTSISLKEINLSDNALD 372

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DE A ++A  +    TI+ +D+  NNI  +GAS +      N+ + +L    N I     
Sbjct: 373 DEAAARLAQNIMDGITISVVDVSCNNIGEEGASQLIDAALRNARLVALMTNGNSISRVAQ 432

Query: 461 KALSEVLK 468
           K L  +L+
Sbjct: 433 KRLDNLLE 440



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 4/303 (1%)

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +S+  + T++   N +G  G   +   L +++ V  + +   D+  EG   +A ++  + 
Sbjct: 73  ESDTPIHTIDFMDNQLGPTGAAKIASCL-ESSPVTEVFICYNDIGKEGCDGLAGVVNVSH 131

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+VL++  N +  S    L  ++  ++ ++ L L  N     GA  +AK LE N  L  
Sbjct: 132 SLQVLDIRGNHLSASDVQRLLRSVSMSTALKRLGLASNRLDPEGAALVAKALERNTYLSS 191

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N +G  G   L   L +    L VL +  N +   G   + + +K  + L  + L
Sbjct: 192 LDLSVNELGPSGAECLAGILRTSVSVLQVLQLHGNYLGPTGVIAICDAVKTNRELKRLTL 251

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYN 453
             N   DE A  IA  L+ N T+  +D+  N + + G   IA+  L  N+ +  L L+ N
Sbjct: 252 GNNHATDEAAGGIAAMLEANETLEELDIRLNTLTANGVRTIAQQGLAKNTSLAVLSLSGN 311

Query: 454 PIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +G  GA  L++VL  H    +  L L  C + ASG   VA +L  + ++  ++L  N L
Sbjct: 312 EVGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLLSTSISLKEINLSDNAL 371

Query: 512 RDE 514
            DE
Sbjct: 372 DDE 374



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 163/354 (46%), Gaps = 12/354 (3%)

Query: 150 SKQTLNEFAKEL------RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           SKQ L+   + L          ++D      G  G   +A  L  +    EV    N I 
Sbjct: 58  SKQQLDSICRALMDRESDTPIHTIDFMDNQLGPTGAAKIASCL-ESSPVTEVFICYNDIG 116

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
             G     GV+  + +L+ L++ GN +    V+ L   +  +  ++RL L+S  L  EGA
Sbjct: 117 KEGCDGLAGVVNVSHSLQVLDIRGNHLSASDVQRLLRSVSMSTALKRLGLASNRLDPEGA 176

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANAL 322
             +A+ L+ N+ L  L+L+ N +  SG   LA  L  + S ++ L L+GNY G  G  A+
Sbjct: 177 ALVAKALERNTYLSSLDLSVNELGPSGAECLAGILRTSVSVLQVLQLHGNYLGPTGVIAI 236

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
              ++ N+ L+ L L  N   DE    + + L + +  L  LDI  N+++A G   +A+ 
Sbjct: 237 CDAVKTNRELKRLTLGNNHATDEAAGGIAAMLEANE-TLEELDIRLNTLTANGVRTIAQQ 295

Query: 383 -IKNCKSLLWINLYMNDIGDEGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVL 439
            +    SL  ++L  N++G  GA ++   L   Q   +  +DL    + + G   +A +L
Sbjct: 296 GLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLL 355

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             +  +  ++L+ N +  + A  L++ +     I+ + +    IG  GA  + D
Sbjct: 356 STSISLKEINLSDNALDDEAAARLAQNIMDGITISVVDVSCNNIGEEGASQLID 409



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 40/355 (11%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLE---NSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           R +++    I      S+  AL++   ++ I ++    N  G  GA  +A  LE +  + 
Sbjct: 48  RRIQIPWRQISKQQLDSICRALMDRESDTPIHTIDFMDNQLGPTGAAKIASCLESSP-VT 106

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+ +  N IG EG   L +G+ +    L VLDI  N +SA     +   +    +L  + 
Sbjct: 107 EVFICYNDIGKEGCDGL-AGVVNVSHSLQVLDIRGNHLSASDVQRLLRSVSMSTALKRLG 165

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAY 452
           L  N +  EGA  +A AL++N  ++++DL  N +   GA  +A +L+ + SV+  L L  
Sbjct: 166 LASNRLDPEGAALVAKALERNTYLSSLDLSVNELGPSGAECLAGILRTSVSVLQVLQLHG 225

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N +G  G  A+ + +K +  +  L LG        A  +A ML  N T+  LD+R N L 
Sbjct: 226 NYLGPTGVIAICDAVKTNRELKRLTLGNNHATDEAAGGIAAMLEANETLEELDIRLNTL- 284

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
                                             G + +AQ     N +L  + L+ NE+
Sbjct: 285 -------------------------------TANGVRTIAQQGLAKNTSLAVLSLSGNEV 313

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
              GA  + Q L +++   +  L+L++  LT  G      A  L   +S KE+N+
Sbjct: 314 GPVGANELTQVLTSHQRSVLEKLDLSSCGLTASG--GFRVASLLSTSISLKEINL 366



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 3/202 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIAL 220
           R    + +   +  DE    +A  L  N+T EE+    N +TA G++      L  N +L
Sbjct: 244 RELKRLTLGNNHATDEAAGGIAAMLEANETLEELDIRLNTLTANGVRTIAQQGLAKNTSL 303

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L+LSGN +G  G   L  +L  +  + +E+L LSS  L   G   +A LL  +  L+ 
Sbjct: 304 AVLSLSGNEVGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLLSTSISLKE 363

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + L++N +D      LA+ +++  TI  + ++ N  G  GA+ L      N  L  L  +
Sbjct: 364 INLSDNALDDEAAARLAQNIMDGITISVVDVSCNNIGEEGASQLIDAALRNARLVALMTN 423

Query: 339 GNSIGDEGIRALMSGLSSRKGK 360
           GNSI     + L + L  R+ K
Sbjct: 424 GNSISRVAQKRLDNLLEERQAK 445


>gi|297680729|ref|XP_002818131.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 isoform 2 [Pongo abelii]
          Length = 953

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 1/213 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  L L+ N     G   L++ L   K +  L L+ N I D G R +   L   K +L
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECK-RL 786

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G   +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ 
Sbjct: 787 THLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLS 846

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I ++G  ++AR L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   
Sbjct: 847 LASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQN 906

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           QI A G   +AD L+ N  I+ + L  N ++ E
Sbjct: 907 QITAKGTAQLADALQSNTGITEICLNGNLIKPE 939



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKRLTHLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
           +N  +    LN
Sbjct: 922 SNTGITEICLN 932



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L VL L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELRPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+  K L  L L  N I  EG + L   + + K  ++ + +  N +  +GA   AE ++N
Sbjct: 780 LDECKRLTHLKLGKNKITSEGGKCLALAVKNSKS-ISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  ++L  N I  EG + +A AL+QN ++  + L  N ++ + A ++A +LK N  +
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             L L  N I A G   L++ L+ +  I  + L
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQSNTGITEICL 931



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKRLTHLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N I   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L S  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKRLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NGI+ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELNDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKRLT 787

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            L L  N +  E                                G KCLA + K  ++++
Sbjct: 788 HLKLGKNKITSE--------------------------------GGKCLALAVKN-SKSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + + +  N++ D+GA A A+AL+ +   ++T+L+LA+N ++  G  +L  A
Sbjct: 815 SEVGMWGNQVGDEGAKAFAEALRNHP--SLTTLSLASNGISTEGGKSLARA 863


>gi|399497950|emb|CCG20303.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEG  AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|355747741|gb|EHH52238.1| Caspase recruitment domain-containing protein 4 [Macaca
           fascicularis]
          Length = 953

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 923 NTGITEICLNGNLIKPE 939



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 NNTGITEICLN 932



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   LA A+  + +I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLAS 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +  EG ++L   L  +   L +L +  N +  + A  +AE +K  ++L  + L  N I
Sbjct: 850 NGVSTEGGKSLARAL-QQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +G  ++ADAL+ N  IT I L GN I  +     A+V +D   I
Sbjct: 909 TAKGTAQLADALQNNTGITEICLNGNLIKPEE----AKVYEDEKRI 950



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 5/215 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELQPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   + + K   ++ D+G   N +  +GA   AE +
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSK---SISDVGMWGNQVGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N +  EG + +A AL+QN ++  + L  N +  + A ++A +LK N 
Sbjct: 837 RNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  L L  N I A G   L++ L+ +  I  + L
Sbjct: 897 TLKHLWLIQNQITAKGTAQLADALQNNTGITEICL 931



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 94/205 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L+E L   +    +    N IT  G +    +L     L  L
Sbjct: 730 LTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L +
Sbjct: 790 KLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLAS 849

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I 
Sbjct: 850 NGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQIT 909

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGN 368
            +G   L   L +  G   +   GN
Sbjct: 910 AKGTAQLADALQNNTGITEICLNGN 934



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L       
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KCLA + K  ++++
Sbjct: 781 ----------DE-CKGLTHLKLGKNKITS--------------EGGKCLALAVKN-SKSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + + +  N++ D+GA A A+AL+ +   ++T+L+LA+N ++  G  +L  A
Sbjct: 815 SDVGMWGNQVGDEGAKAFAEALRNHP--SLTTLSLASNGVSTEGGKSLARA 863


>gi|399497954|emb|CCG20305.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNCISEEGVDELKEIFK 492



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNCISEEGVDELKE 489



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEG  AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNCISEEGVDEL 487


>gi|399498034|emb|CCG20345.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E V  +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAVNAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +I  AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIVKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 142/296 (47%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS +    V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAVNAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  + ++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIVKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 69/341 (20%), Positives = 131/341 (38%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  +  +A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAVNAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  I +AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIVKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEG  AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   + +AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIVKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399498058|emb|CCG20357.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|399497916|emb|CCG20286.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLREALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +DL  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLREAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +DL+ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 147/315 (46%), Gaps = 6/315 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLREALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ ++L  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLKDN-SVITSL 448
           +  + K +  V+ SL
Sbjct: 487 LKEIFKKSPEVLASL 501



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLREALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|109066981|ref|XP_001085719.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Macaca mulatta]
          Length = 953

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 923 NTGITEICLNGNLIKPE 939



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 NNTGITEICLN 932



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 5/215 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   + + K   ++ D+G   N +  +GA   AE +
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSK---SISDVGMWGNQVGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N +  EG + +A AL+QN ++  + L  N +  + A ++A +LK N 
Sbjct: 837 RNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  L L  N I A G   L++ L+ +  I  + L
Sbjct: 897 TLKHLWLIQNQITAKGTAQLADALQNNTGITEICL 931



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L       
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KCLA + K  ++++
Sbjct: 781 ----------DE-CKGLTHLKLGKNKITS--------------EGGKCLALAVKN-SKSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + + +  N++ D+GA A A+AL+ +   ++T+L+LA+N ++  G  +L  A
Sbjct: 815 SDVGMWGNQVGDEGAKAFAEALRNHP--SLTTLSLASNGVSTEGGKSLARA 863


>gi|399498076|emb|CCG20366.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|399497982|emb|CCG20319.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|387540924|gb|AFJ71089.1| nucleotide-binding oligomerization domain-containing protein 1
           [Macaca mulatta]
          Length = 953

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 923 NTGITEICLNGNLIKPE 939



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 NNTGITEICLN 932



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 5/215 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   + + K   ++ D+G   N +  +GA   AE +
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSK---SISDVGMWGNQVGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N +  EG + +A AL+QN ++  + L  N +  + A ++A +LK N 
Sbjct: 837 RNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  L L  N I A G   L++ L+ +  I  + L
Sbjct: 897 TLKHLWLIQNQITAKGTAQLADALQNNTGITEICL 931



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L       
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KCLA + K  ++++
Sbjct: 781 ----------DE-CKGLTHLKLGKNKITS--------------EGGKCLALAVKN-SKSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + + +  N++ D+GA A A+AL+ +   ++T+L+LA+N ++  G  +L  A
Sbjct: 815 SDVGMWGNQVGDEGAKAFAEALRNHP--SLTTLSLASNGVSTEGGKSLARA 863


>gi|156361881|ref|XP_001625512.1| predicted protein [Nematostella vectensis]
 gi|156212349|gb|EDO33412.1| predicted protein [Nematostella vectensis]
          Length = 401

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 147/298 (49%), Gaps = 7/298 (2%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + DE    L   L  N  V  L L   ++ D+GAK I  LL+   +L+ L L+ N I   
Sbjct: 65  LDDEDADILYKTLKANTFVVSLDLGYNNIGDDGAKIIGVLLQETLVLQTLILSYNDIGPE 124

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A+ L  N T+R L LNGN  G  G  A+A  L+ N  L EL +    +  E + A
Sbjct: 125 GGEIIAKGLQVNETLRVLKLNGNKIGNKGGMAIAGTLQVNTVLEELDISEVDLKTESVIA 184

Query: 350 LMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            M+ + +    L VL I      S   +   H+A+ +K    L  ++L   DI D GAE+
Sbjct: 185 -MATVLNYNNTLKVLYINRPLLFSHQEETTVHMAKMLKVNIRLRELHLTHYDIRDFGAER 243

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           I + L  N T+T ++L  NNI   GA  +A +LK N+ +  L+LAYN I  DGA A++E 
Sbjct: 244 IMEHLVDNLTLTHLNLASNNITRDGAKQLAILLKRNTPLEMLNLAYNRIEDDGAVAIAEA 303

Query: 467 LKFHGNINTLKLGWC--QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           L  + N N +KL  C   I + G   +A  ++ N  ++ + +  N L +  C     L
Sbjct: 304 LAAY-NTNLIKLVLCNNNIASQGLCALAKSMKSNVGLTSIYIWGNHLEEPACRAFQDL 360



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 144/303 (47%), Gaps = 27/303 (8%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+   N GD+G   +   L      + +  + N I   G +     LQ N  L+ L L
Sbjct: 85  SLDLGYNNIGDDGAKIIGVLLQETLVLQTLILSYNDIGPEGGEIIAKGLQVNETLRVLKL 144

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           +GN IG++G   +   L  N  +E L +S VDL+ E   A+A +L  N+ L+VL +N  +
Sbjct: 145 NGNKIGNKGGMAIAGTLQVNTVLEELDISEVDLKTESVIAMATVLNYNNTLKVLYINRPL 204

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +    F+   E         ++H             +AK L+ N  LRELHL    I D 
Sbjct: 205 L----FSHQEET--------TVH-------------MAKMLKVNIRLRELHLTHYDIRDF 239

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G   +M  L      L  L++ +N+I+  GA  +A  +K    L  +NL  N I D+GA 
Sbjct: 240 GAERIMEHLVDNL-TLTHLNLASNNITRDGAKQLAILLKRNTPLEMLNLAYNRIEDDGAV 298

Query: 406 KIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            IA+AL   N  +  + L  NNI S+G  A+A+ +K N  +TS+ +  N +     +A  
Sbjct: 299 AIAEALAAYNTNLIKLVLCNNNIASQGLCALAKSMKSNVGLTSIYIWGNHLEEPACRAFQ 358

Query: 465 EVL 467
           ++L
Sbjct: 359 DLL 361



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 10/220 (4%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +Y   + DE A+ +   LK N  + ++DLG NNI   GA  I  +L++  V+ +L L+YN
Sbjct: 60  MYRRRLDDEDADILYKTLKANTFVVSLDLGYNNIGDDGAKIIGVLLQETLVLQTLILSYN 119

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG +G + +++ L+ +  +  LKL   +IG  G   +A  L+ N  +  LD+    L+ 
Sbjct: 120 DIGPEGGEIIAKGLQVNETLRVLKLNGNKIGNKGGMAIAGTLQVNTVLEELDISEVDLKT 179

Query: 514 E-VCSGCNGLSFFHS--AIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFN 570
           E V +    L++ ++   +Y  + +LF       +  AK L      VN  L  + L   
Sbjct: 180 ESVIAMATVLNYNNTLKVLYINRPLLFSHQEETTVHMAKMLK-----VNIRLRELHLTHY 234

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           +IRD GA  I + L  N  + +T LNLA+N +T+ G   L
Sbjct: 235 DIRDFGAERIMEHLVDN--LTLTHLNLASNNITRDGAKQL 272



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 9/254 (3%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L GNK      ++   + DE    L   L +    ++ LD+G N+I   GA  +   ++ 
Sbjct: 49  LHGNKRNERNEMYRRRLDDEDADILYKTLKANTFVVS-LDLGYNNIGDDGAKIIGVLLQE 107

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              L  + L  NDIG EG E IA  L+ N T+  + L GN I +KG  AIA  L+ N+V+
Sbjct: 108 TLVLQTLILSYNDIGPEGGEIIAKGLQVNETLRVLKLNGNKIGNKGGMAIAGTLQVNTVL 167

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE---FVADMLRYNNTIS 502
             LD++   +  +   A++ VL ++  +  L +    + +   E    +A ML+ N  + 
Sbjct: 168 EELDISEVDLKTESVIAMATVLNYNNTLKVLYINRPLLFSHQEETTVHMAKMLKVNIRLR 227

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            L L    +RD    G   +        +L H+   S  I    GAK LA   K  N  L
Sbjct: 228 ELHLTHYDIRD---FGAERIMEHLVDNLTLTHLNLASNNITR-DGAKQLAILLK-RNTPL 282

Query: 563 TSIDLAFNEIRDDG 576
             ++LA+N I DDG
Sbjct: 283 EMLNLAYNRIEDDG 296


>gi|402863820|ref|XP_003896196.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Papio anubis]
          Length = 953

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 923 NTGITEICLNGNLIKPE 939



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 NNTGITEICLN 932



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 5/215 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   + + K   ++ D+G   N +  +GA   AE +
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSK---SISDVGMWGNQVGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N +  EG + +A AL+QN ++  + L  N +  + A ++A +LK N 
Sbjct: 837 RNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  L L  N I A G   L++ L+ +  I  + L
Sbjct: 897 TLKHLWLIQNQITAKGTAQLADALQNNTGITEICL 931



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L       
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KCLA + K  ++++
Sbjct: 781 ----------DE-CKGLTHLKLGKNKITS--------------EGGKCLALAVKN-SKSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + + +  N++ D+GA A A+AL+ +   ++T+L+LA+N ++  G  +L  A
Sbjct: 815 SDVGMWGNQVGDEGAKAFAEALRNHP--SLTTLSLASNGVSTEGGKSLARA 863


>gi|345788194|ref|XP_542482.3| PREDICTED: LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing
            protein 14 [Canis lupus familiaris]
          Length = 1093

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 147/306 (48%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD+G+  L E+L + +   + +S  + G+T          L  + +L+ LNL
Sbjct: 735  LDLKGSDIGDDGVKSLCEALKHPECKLQNLSLESCGLTTLCCLNISKALIRSQSLRFLNL 794

Query: 226  SGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GVK LC+ L      +ERL L S  L   G + ++  L +N  L  L L +N
Sbjct: 795  STNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLALISNKRLTHLCLADN 854

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   + +AL      ++SL L   +  +L +  L+  L  NKSL  L L  N I 
Sbjct: 855  ILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSSEHLSSALLCNKSLIHLDLGSNWIQ 914

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D+GI+ L          L  L++    +++     +A  I N   L  ++L  ND+ D+G
Sbjct: 915  DDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCLDLASAILNNSHLQNLDLGHNDLRDDG 974

Query: 404  AEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + +AL+  N  I  + L    + S     ++  L+ N  +  ++L  N +G +G   
Sbjct: 975  VKILCEALRHPNCNIQRLGLEYCGLTSLCCQDLSYTLRSNQNLIKINLKQNTLGYEGMMK 1034

Query: 463  LSEVLK 468
            L EVLK
Sbjct: 1035 LCEVLK 1040



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 146/311 (46%), Gaps = 6/311 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD+GVK LC+ L      ++ L L S  L      
Sbjct: 718  GCQDIASSLTHNQNLMHLDLKGSDIGDDGVKSLCEALKHPECKLQNLSLESCGLTTLCCL 777

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALA 323
             I++ L  +  LR L L+ N +   G   L EAL      +  L L        G   L+
Sbjct: 778  NISKALIRSQSLRFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLS 837

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
              L  NK L  L L  N +GD+G++ +   L   + KL  L +     ++  + H++  +
Sbjct: 838  LALISNKRLTHLCLADNILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSSEHLSSAL 897

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN 442
               KSL+ ++L  N I D+G + + DA +     +  ++L G  + S     +A  + +N
Sbjct: 898  LCNKSLIHLDLGSNWIQDDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCLDLASAILNN 957

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG--WCQIGASGAEFVADMLRYNNT 500
            S + +LDL +N +  DG K L E L+ H N N  +LG  +C + +   + ++  LR N  
Sbjct: 958  SHLQNLDLGHNDLRDDGVKILCEALR-HPNCNIQRLGLEYCGLTSLCCQDLSYTLRSNQN 1016

Query: 501  ISILDLRANGL 511
            +  ++L+ N L
Sbjct: 1017 LIKINLKQNTL 1027



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 158/332 (47%), Gaps = 26/332 (7%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGA 319
           +  +L  N  LR L+L ++ +D     +  + L      L+   +R L   G      G 
Sbjct: 666 LCSVLHTNEHLRELDLCHSNLDELAMKTFYQELRHPNCKLQRLLMRFLSFPG------GC 719

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             +A  L  N++L  L L G+ IGD+G+++L   L   + KL  L + +  ++     ++
Sbjct: 720 QDIASSLTHNQNLMHLDLKGSDIGDDGVKSLCEALKHPECKLQNLSLESCGLTTLCCLNI 779

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
           ++ +   +SL ++NL  N + D+G + + +AL   +  +  + L    +   G   ++  
Sbjct: 780 SKALIRSQSLRFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLA 839

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRY 497
           L  N  +T L LA N +G DG K +++ LK     + +L L  C   +  +E ++  L  
Sbjct: 840 LISNKRLTHLCLADNILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSSEHLSSALLC 899

Query: 498 NNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHM--LFYSLCINYLQGAKCLAQS 554
           N ++  LDL +N ++D+ +   C+        +  L+ M  +  S+C        CL  +
Sbjct: 900 NKSLIHLDLGSNWIQDDGIKLLCDAFRHPSCNLQDLELMGCVLTSMC--------CLDLA 951

Query: 555 FKVVNEA-LTSIDLAFNEIRDDGAFAIAQALK 585
             ++N + L ++DL  N++RDDG   + +AL+
Sbjct: 952 SAILNNSHLQNLDLGHNDLRDDGVKILCEALR 983


>gi|395503869|ref|XP_003756284.1| PREDICTED: uncharacterized protein C14orf166B homolog [Sarcophilus
           harrisii]
          Length = 481

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 144/300 (48%), Gaps = 37/300 (12%)

Query: 308 HLNGNYGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           H+N N+ G    G  A+A  L  N ++  L L  N I +EG+ ALM  L      +  L+
Sbjct: 101 HMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLALMQMLHENY-YIQELN 159

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           + +N + + GA  + +++    S LW I L  N+  D+ AE   +AL  N  I  +DL  
Sbjct: 160 VSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRNALVSNYRIKELDLSH 219

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+   KG   +  +L  N  + +L+L +N + + GA A+   L+ +  + TL L W   G
Sbjct: 220 NSFSEKGGEQLGYMLVLNEGLQTLNLGWNQLHSRGAVAVCYSLRVNVTLKTLDLSWNGFG 279

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
             GA+ + ++L+ N+T+S LD+ +N L ++   G N LS                   N 
Sbjct: 280 NEGAQVLGEVLKINSTLSYLDISSNHLNND---GANSLS-------------------NG 317

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           L+           +NE L  + ++ N +  +GA +I  ++K N    +  ++++N  +T+
Sbjct: 318 LE-----------LNETLRILKMSHNPVTLEGALSIILSVKRNPKSRLEEIDISNVLVTE 366



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 135/248 (54%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G +G K +   LV N  + RL+L    + +EG  A+ ++L  N  +
Sbjct: 96  NMEETHMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLALMQMLHENYYI 155

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N +   G   + + LLEN S++ S+ L GN      A      L  N  ++EL
Sbjct: 156 QELNVSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRNALVSNYRIKEL 215

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  NS  ++G   L   L   +G L  L++G N + ++GA  V   ++   +L  ++L 
Sbjct: 216 DLSHNSFSEKGGEQLGYMLVLNEG-LQTLNLGWNQLHSRGAVAVCYSLRVNVTLKTLDLS 274

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N  G+EGA+ + + LK N T++ +D+  N++++ GA++++  L+ N  +  L +++NP+
Sbjct: 275 WNGFGNEGAQVLGEVLKINSTLSYLDISSNHLNNDGANSLSNGLELNETLRILKMSHNPV 334

Query: 456 GADGAKAL 463
             +GA ++
Sbjct: 335 TLEGALSI 342



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 2/248 (0%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            + N     + L+   L  +G KAIA  L +N+ +  LEL +N I   G  +L + L EN
Sbjct: 93  FIRNMEETHMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLALMQMLHEN 152

Query: 302 STIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             I+ L+++ N+ G+ GA  +   L E   SL  + L GN+  D+      + L S   +
Sbjct: 153 YYIQELNVSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRNALVSNY-R 211

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +  LD+ +NS S KG   +   +   + L  +NL  N +   GA  +  +L+ N T+ T+
Sbjct: 212 IKELDLSHNSFSEKGGEQLGYMLVLNEGLQTLNLGWNQLHSRGAVAVCYSLRVNVTLKTL 271

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           DL  N   ++GA  +  VLK NS ++ LD++ N +  DGA +LS  L+ +  +  LK+  
Sbjct: 272 DLSWNGFGNEGAQVLGEVLKINSTLSYLDISSNHLNNDGANSLSNGLELNETLRILKMSH 331

Query: 481 CQIGASGA 488
             +   GA
Sbjct: 332 NPVTLEGA 339



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 32/315 (10%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + ++++    G +G   +A +L  N T   +    N I   G+ A   +L  N  ++ LN
Sbjct: 100 THMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLALMQMLHENYYIQELN 159

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G  G K + D L++N + +  +QL+  + +D+ A+     L +N  ++ L+L++
Sbjct: 160 VSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRNALVSNYRIKELDLSH 219

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L   L+ N  +++L+L  N   + GA A+   L  N +L+ L L  N  G
Sbjct: 220 NSFSEKGGEQLGYMLVLNEGLQTLNLGWNQLHSRGAVAVCYSLRVNVTLKTLDLSWNGFG 279

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG + L                              E +K   +L ++++  N + ++G
Sbjct: 280 NEGAQVL-----------------------------GEVLKINSTLSYLDISSNHLNNDG 310

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAK 461
           A  +++ L+ N T+  + +  N +  +GA +I   +K N  S +  +D++   +     K
Sbjct: 311 ANSLSNGLELNETLRILKMSHNPVTLEGALSIILSVKRNPKSRLEEIDISNVLVTEGFVK 370

Query: 462 ALSEVLKFHGNINTL 476
            L+ V   H  ++ L
Sbjct: 371 QLNGVFSVHPELDVL 385



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 125/244 (51%), Gaps = 11/244 (4%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +    +NL  + +G +G + IA AL  N TIT ++L  N I  +G  A
Sbjct: 86  GVIPVSYFIRNMEET-HMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLA 144

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVAD 493
           + ++L +N  I  L++++N +G+ GAK +++ +L+   ++ +++L         AE   +
Sbjct: 145 LMQMLHENYYIQELNVSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRN 204

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  I  LDL  N   ++       +   +  + +L      +L  N L     +A 
Sbjct: 205 ALVSNYRIKELDLSHNSFSEKGGEQLGYMLVLNEGLQTL------NLGWNQLHSRGAVAV 258

Query: 554 SFKV-VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            + + VN  L ++DL++N   ++GA  + + LK N    ++ L++++N L   G ++L++
Sbjct: 259 CYSLRVNVTLKTLDLSWNGFGNEGAQVLGEVLKINS--TLSYLDISSNHLNNDGANSLSN 316

Query: 613 AKDL 616
             +L
Sbjct: 317 GLEL 320


>gi|410931217|ref|XP_003978992.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like,
           partial [Takifugu rubripes]
          Length = 919

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 184/402 (45%), Gaps = 23/402 (5%)

Query: 201 GITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDL 258
            +T     +    L+SN + L  L+LS N + D GVK LC  L   N  ++ L L    L
Sbjct: 512 SLTEISCGSLASALKSNPSHLTELDLSDNQLQDSGVKLLCSGLESPNCKLKTLILCDCSL 571

Query: 259 RDEGAKAIAELLKNN-SILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGG 315
            +    ++A  LK+N S LR L+L  NN +  SG   L   L   N  + +L L      
Sbjct: 572 SENSCDSLASALKSNFSHLRELDLGLNNQLQDSGVRLLCSGLESPNCKLETLRLRDCSLS 631

Query: 316 ALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
                +LA  L+ N S LREL L  N + D G++ L SGL S   KL  L + + S+S  
Sbjct: 632 ETSCGSLASALKSNPSHLRELDLKFNQLQDSGVKLLCSGLESPNCKLETLRLWSCSLSEI 691

Query: 375 GAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGA 432
               +A  +K N   L  ++L +N + D G + +   L+  N  + T+ L   ++     
Sbjct: 692 SCGSLASALKSNPSHLRELDLGLNHLQDSGVKLLCSGLESPNCKLKTLGLWRCSLSEISC 751

Query: 433 SAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEF 490
            ++A  LK N S +T LDL  N +   G K L   L+  +  + TL+L  C +       
Sbjct: 752 GSLASALKSNPSHLTELDLGDNQLQDSGVKLLCSALESPNCKLETLRLWGCSLSEISCGS 811

Query: 491 VADMLRYNN--TISILDLRANGLRDE----VCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
           +A +L  +N   +  LDL  N L+D     +CSG        S    L+ +  +S  I+ 
Sbjct: 812 LASVLSKSNFSHLRELDLSDNQLQDSGMKLLCSG------LESPNCKLETLFLWSCSISE 865

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           +     LA + K     L  +DL+ N+++D G   ++  +K+
Sbjct: 866 ISCGS-LASALKSNPSHLKELDLSCNKLQDSGVKLLSDLVKS 906



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 116/254 (45%), Gaps = 8/254 (3%)

Query: 167 VDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKTLN 224
           +D+      D G+  L   L   N   E +   +  ++     +    L+SN + L+ L+
Sbjct: 652 LDLKFNQLQDSGVKLLCSGLESPNCKLETLRLWSCSLSEISCGSLASALKSNPSHLRELD 711

Query: 225 LSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELN 282
           L  N + D GVK LC  L   N  ++ L L    L +    ++A  LK+N S L  L+L 
Sbjct: 712 LGLNHLQDSGVKLLCSGLESPNCKLKTLGLWRCSLSEISCGSLASALKSNPSHLTELDLG 771

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN--KSLRELHLHG 339
           +N +  SG   L  AL   N  + +L L G     +   +LA  L  +    LREL L  
Sbjct: 772 DNQLQDSGVKLLCSALESPNCKLETLRLWGCSLSEISCGSLASVLSKSNFSHLRELDLSD 831

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMND 398
           N + D G++ L SGL S   KL  L + + SIS      +A  +K N   L  ++L  N 
Sbjct: 832 NQLQDSGMKLLCSGLESPNCKLETLFLWSCSISEISCGSLASALKSNPSHLKELDLSCNK 891

Query: 399 IGDEGAEKIADALK 412
           + D G + ++D +K
Sbjct: 892 LQDSGVKLLSDLVK 905



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 7/205 (3%)

Query: 167 VDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKTLN 224
           +D+   +  D G+  L   L   N   + +      ++     +    L+SN + L  L+
Sbjct: 710 LDLGLNHLQDSGVKLLCSGLESPNCKLKTLGLWRCSLSEISCGSLASALKSNPSHLTELD 769

Query: 225 LSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLK--NNSILRVLEL 281
           L  N + D GVK LC  L   N  +E L+L    L +    ++A +L   N S LR L+L
Sbjct: 770 LGDNQLQDSGVKLLCSALESPNCKLETLRLWGCSLSEISCGSLASVLSKSNFSHLRELDL 829

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHG 339
           ++N +  SG   L   L   N  + +L L       +   +LA  L+ N S L+EL L  
Sbjct: 830 SDNQLQDSGMKLLCSGLESPNCKLETLFLWSCSISEISCGSLASALKSNPSHLKELDLSC 889

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVL 364
           N + D G++ L   + S   +L  L
Sbjct: 890 NKLQDSGVKLLSDLVKSPNYRLETL 914


>gi|355560721|gb|EHH17407.1| Caspase recruitment domain-containing protein 4 [Macaca mulatta]
          Length = 953

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 923 NTGITEICLNGNLIKPE 939



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DEV          
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 NNTGITEICLN 932



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 5/215 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   + + K   ++ D+G   N +  +GA   AE +
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSK---SISDVGMWGNQVGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N +  EG + +A AL+QN ++  + L  N +  + A ++A +LK N 
Sbjct: 837 RNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  L L  N I A G   L++ L+ +  I  + L
Sbjct: 897 TLKHLWLIQNQITAKGTAQLADALQNNTGITEICL 931



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L       
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KCLA + K  ++++
Sbjct: 781 ----------DE-CKGLTHLKLGKNKITS--------------EGGKCLALAVKN-SKSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + + +  N++ D+GA A A+AL+ +   ++T+L+LA+N ++  G  +L  A
Sbjct: 815 SDVGMWGNQVGDEGAKAFAEALRNHP--SLTTLSLASNGVSTEGGKSLARA 863


>gi|351709019|gb|EHB11938.1| Nucleotide-binding oligomerization domain-containing protein 1
           [Heterocephalus glaber]
          Length = 953

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 39/272 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L   LS    +L VL +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 719 GVRELQPCLS----RLVVLRLSVNQITDNGVKALCEELTKYKILTFLGLYSNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L++ + +T + LG N I S+G   +A  +K+++ I+ L +  N IG +GAKA +E
Sbjct: 775 YVARILEECKGLTHLKLGKNKITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++  L L +  I + G + +A  L++N ++SI  L  N L DEV          
Sbjct: 835 ALRNHPSLTFLSLAFNGISSEGGKSLAKALQHNTSLSIFWLTQNELNDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+  A+  K VN+ L  + L  N+I   G   +A+AL+
Sbjct: 885 ----------------------AESFAEMLK-VNQTLKHLWLIQNQITAKGTTQLAEALR 921

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
             E+  +T + L  N +         + K LV
Sbjct: 922 --ENTGITEICLNGNLIKPEEAKVFEEEKRLV 951



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 1/215 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L+LS   + D G KA+ E L    IL  L L +N I   G   +A  L E   +  L L 
Sbjct: 733 LRLSVNQITDNGVKALCEELTKYKILTFLGLYSNQITDVGARYVARILEECKGLTHLKLG 792

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   LA  ++ +  + +L + GN IGDEG +A    L +    L  L +  N 
Sbjct: 793 KNKITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGAKAFAEALRNHPS-LTFLSLAFNG 851

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS++G   +A+ +++  SL    L  N++ DE AE  A+ LK N+T+  + L  N I +K
Sbjct: 852 ISSEGGKSLAKALQHNTSLSIFWLTQNELNDEVAESFAEMLKVNQTLKHLWLIQNQITAK 911

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           G + +A  L++N+ IT + L  N I  + AK   E
Sbjct: 912 GTTQLAEALRENTGITEICLNGNLIKPEEAKVFEE 946



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 89/200 (44%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L E L   +    +   +N IT  G +    +L+    L  L L  N
Sbjct: 735 LSVNQITDNGVKALCEELTKYKILTFLGLYSNQITDVGARYVARILEECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG KCL   + ++  +  L +    + DEGAKA AE L+N+  L  L L  N I  
Sbjct: 795 KITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGAKAFAEALRNHPSLTFLSLAFNGISS 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA+AL  N+++    L  N      A + A+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLAKALQHNTSLSIFWLTQNELNDEVAESFAEMLKVNQTLKHLWLIQNQITAKGTT 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L    G   +   GN
Sbjct: 915 QLAEALRENTGITEICLNGN 934



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +    +    N IT+ G K     ++++  +  L + GN IGDEG 
Sbjct: 770 DVGARYVARILEECKGLTHLKLGKNKITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K++A+ L++N+ L +  L  N ++     S A
Sbjct: 830 KAFAEALRNHPSLTFLSLAFNGISSEGGKSLAKALQHNTSLSIFWLTQNELNDEVAESFA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA+ L  N  + E+ L+GN I  E
Sbjct: 890 EMLKVNQTLKHLWLIQNQITAKGTTQLAEALRENTGITEICLNGNLIKPE 939



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 77/154 (50%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           +E +  + + +       EG   LA ++  +    ++    N I   G KAF   L+++ 
Sbjct: 781 EECKGLTHLKLGKNKITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGAKAFAEALRNHP 840

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  L+L+ N I  EG K L   L  N  +    L+  +L DE A++ AE+LK N  L+ 
Sbjct: 841 SLTFLSLAFNGISSEGGKSLAKALQHNTSLSIFWLTQNELNDEVAESFAEMLKVNQTLKH 900

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L L  N I   G T LAEAL EN+ I  + LNGN
Sbjct: 901 LWLIQNQITAKGTTQLAEALRENTGITEICLNGN 934


>gi|426244300|ref|XP_004015961.1| PREDICTED: LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing
            protein 5 [Ovis aries]
          Length = 1164

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 3/306 (0%)

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLR 259
            G+T A  +    VL ++++LK+L+L GN + D+GVK LCD L V    +++L L S  L 
Sbjct: 758  GLTPASCRVISQVLATSVSLKSLSLMGNKVADQGVKSLCDALKVAPCTLQKLILGSCGLA 817

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALG 318
                + +A  L  N  L  L L+ + +   G + L  A+ L +  ++ L LN       G
Sbjct: 818  ATTCQDLASALIENQGLTHLSLSGDELGSEGMSLLCRAVKLPSCGLQKLALNACSLDVAG 877

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
               LA  L  N+ L  L L  N + D G+  L   +      L  LD+ N  ++A     
Sbjct: 878  CGFLALALMSNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLQDLDLVNCRLTAACCES 937

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            ++  I   + L  ++L  N +GDEG   +   LKQ   +T + L    + S+G  A++  
Sbjct: 938  LSNVITRSRHLRSLDLAANALGDEGIVALCKGLKQKNALTRLGLEACGLTSEGCKALSAA 997

Query: 439  LKDNSVITSLDLAYNPIGADGAKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L  +  + SL+L  N +   G   L S  +    N+ T+ L   Q  A     +  + R 
Sbjct: 998  LICSRHLASLNLMRNDLSPGGMAMLCSAFMHPSSNLQTIGLWKEQYPARVRRLLEQVQRL 1057

Query: 498  NNTISI 503
               + I
Sbjct: 1058 KPHVVI 1063



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 7/290 (2%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  S+ + G    D+G+  L ++L     T +++   + G+ A   +     L  N  L 
Sbjct: 776  SLKSLSLMGNKVADQGVKSLCDALKVAPCTLQKLILGSCGLAATTCQDLASALIENQGLT 835

Query: 222  TLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             L+LSG+ +G EG+  LC  + + + G+++L L++  L   G   +A  L +N  L  L 
Sbjct: 836  HLSLSGDELGSEGMSLLCRAVKLPSCGLQKLALNACSLDVAGCGFLALALMSNRHLTHLS 895

Query: 281  LNNNMIDYSGFTSLAEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ N ++  G   L E ++E S  ++ L L      A    +L+  +  ++ LR L L  
Sbjct: 896  LSMNPLEDPGMNLLCEVMMEPSCPLQDLDLVNCRLTAACCESLSNVITRSRHLRSLDLAA 955

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N++GDEGI AL  GL  +K  L  L +    ++++G   ++  +   + L  +NL  ND+
Sbjct: 956  NALGDEGIVALCKGL-KQKNALTRLGLEACGLTSEGCKALSAALICSRHLASLNLMRNDL 1014

Query: 400  GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARV--LKDNSVIT 446
               G   +  A +  +  + TI L      ++    + +V  LK + VI+
Sbjct: 1015 SPGGMAMLCSAFMHPSSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVVIS 1064



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 183/441 (41%), Gaps = 55/441 (12%)

Query: 189  NQTAEEVSFAANGITAAGIKAFD-------GVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +++AE    A  G+    IK  D        VL ++  L+ L+LSG+ +  E +K LC  
Sbjct: 624  DESAEAWPGAPQGLK---IKTLDEHWEDLCSVLGTHPNLRELDLSGSVLSKEAMKTLCVK 680

Query: 242  LVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNSILRV----LELNNNMIDYSGFTSLAE 296
            L   A  ++ L  +   +          LL N ++ R+      L    + +    +   
Sbjct: 681  LRQPACKIQNLIFTGARVTPGLRHLWMTLLVNRNVTRLDLAGSRLARGRLRFEDVRAAGA 740

Query: 297  ALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL   +  +++L L+           +++ L  + SL+ L L GN + D+G+++L   L 
Sbjct: 741  ALRHPHCALQTLRLDRCGLTPASCRVISQVLATSVSLKSLSLMGNKVADQGVKSLCDALK 800

Query: 356  SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                 L  L +G+  ++A     +A  +   + L  ++L  +++G EG   +  A+K   
Sbjct: 801  VAPCTLQKLILGSCGLAATTCQDLASALIENQGLTHLSLSGDELGSEGMSLLCRAVKLPS 860

Query: 416  T-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV-LKFHGNI 473
              +  + L   ++   G   +A  L  N  +T L L+ NP+   G   L EV ++    +
Sbjct: 861  CGLQKLALNACSLDVAGCGFLALALMSNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPL 920

Query: 474  NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSL 532
              L L  C++ A+  E +++++  +  +  LDL AN L DE + + C GL          
Sbjct: 921  QDLDLVNCRLTAACCESLSNVITRSRHLRSLDLAANALGDEGIVALCKGLK--------- 971

Query: 533  KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                                        ALT + L    +  +G  A++ AL  +  +A 
Sbjct: 972  -------------------------QKNALTRLGLEACGLTSEGCKALSAALICSRHLA- 1005

Query: 593  TSLNLANNFLTKFGQSALTDA 613
             SLNL  N L+  G + L  A
Sbjct: 1006 -SLNLMRNDLSPGGMAMLCSA 1025



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 30/238 (12%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNI 218
            E +  + + +SG   G EG+  L  ++       ++++  A  +  AG       L SN 
Sbjct: 830  ENQGLTHLSLSGDELGSEGMSLLCRAVKLPSCGLQKLALNACSLDVAGCGFLALALMSNR 889

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L  L+LS NP+ D G+  LC+++++          S  L+D                  
Sbjct: 890  HLTHLSLSMNPLEDPGMNLLCEVMME---------PSCPLQD------------------ 922

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+L N  +  +   SL+  +  +  +RSL L  N  G  G  AL KGL+   +L  L L 
Sbjct: 923  LDLVNCRLTAACCESLSNVITRSRHLRSLDLAANALGDEGIVALCKGLKQKNALTRLGLE 982

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG-AFHVAEYIKNCKSLLWINLY 395
               +  EG +AL + L   +  LA L++  N +S  G A   + ++    +L  I L+
Sbjct: 983  ACGLTSEGCKALSAALICSR-HLASLNLMRNDLSPGGMAMLCSAFMHPSSNLQTIGLW 1039



 Score = 42.7 bits (99), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 40/88 (45%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            ++L+      R   S+D++    GDEG+  L + L        +   A G+T+ G KA  
Sbjct: 936  ESLSNVITRSRHLRSLDLAANALGDEGIVALCKGLKQKNALTRLGLEACGLTSEGCKALS 995

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC 239
              L  +  L +LNL  N +   G+  LC
Sbjct: 996  AALICSRHLASLNLMRNDLSPGGMAMLC 1023


>gi|281205123|gb|EFA79316.1| Prostaglandin-E [Polysphondylium pallidum PN500]
          Length = 1633

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 146/280 (52%), Gaps = 23/280 (8%)

Query: 175  GDEGLFFLAESLGYNQTAEEVSF--AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            G++G + +A  + YN+ ++  ++  A N     GI      L+++  +K L L  NP+  
Sbjct: 1296 GNQGGWEIANYIKYNKDSKIDTWYIAGNEFDVEGITPIAEALETDNKVKALWLKRNPLLT 1355

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L  +L  N+ ++ L + +  + DEG + +   L++NS LR L ++ N +     T
Sbjct: 1356 AGCRPLAAMLEKNSYLQILDVLNCGILDEGVEILFGALQHNSTLRHLYIDTNGLTPKSAT 1415

Query: 293  SLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++ + L    + + +++++ N+ G  GA+ LA GL G+K+L  L L  N IG  G + L+
Sbjct: 1416 TVRKHLETGLNKLETIYMSCNHLGDAGASELAAGLLGDKTLLRLGLSSNCIGPAGTKELV 1475

Query: 352  SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GDEGAEKIADA 410
              +  +   L  L++G      +G F +                +N+I GDEGA +IA  
Sbjct: 1476 DAVI-KHPSLLELNLG----FKRGTFLLGS--------------LNNILGDEGANEIARL 1516

Query: 411  LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++ N  I +IDL  N+I  KG SA+   LK N+++TS+DL
Sbjct: 1517 IRANTQIRSIDLTHNSISQKGISALREALKTNNILTSMDL 1556



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 43/298 (14%)

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVLE 280
            L+L    +G EG+K L   +  ++ ++RL L +  + ++G   IA  +K N  S +    
Sbjct: 1260 LDLCKQVVGPEGIKPLLGAMAKSSSIKRLLLGNNIVGNQGGWEIANYIKYNKDSKIDTWY 1319

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +  N  D  G T +AEAL  ++ +++L L  N     G   LA  LE N  L+ L +   
Sbjct: 1320 IAGNEFDVEGITPIAEALETDNKVKALWLKRNPLLTAGCRPLAAMLEKNSYLQILDVLNC 1379

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-----------NC--- 386
             I DEG+  L   L      L  L I  N ++ K A  V ++++           +C   
Sbjct: 1380 GILDEGVEILFGALQ-HNSTLRHLYIDTNGLTPKSATTVRKHLETGLNKLETIYMSCNHL 1438

Query: 387  ---------------KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG-------- 423
                           K+LL + L  N IG  G +++ DA+ ++ ++  ++LG        
Sbjct: 1439 GDAGASELAAGLLGDKTLLRLGLSSNCIGPAGTKELVDAVIKHPSLLELNLGFKRGTFLL 1498

Query: 424  ---GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
                N +  +GA+ IAR+++ N+ I S+DL +N I   G  AL E LK +  + ++ L
Sbjct: 1499 GSLNNILGDEGANEIARLIRANTQIRSIDLTHNSISQKGISALREALKTNNILTSMDL 1556



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 66/315 (20%)

Query: 335  LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
            L L    +G EGI+ L+ G  ++   +  L +GNN +  +G + +A YIK  K       
Sbjct: 1260 LDLCKQVVGPEGIKPLL-GAMAKSSSIKRLLLGNNIVGNQGGWEIANYIKYNK------- 1311

Query: 395  YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
                               +  I T  + GN    +G + IA  L+ ++ + +L L  NP
Sbjct: 1312 -------------------DSKIDTWYIAGNEFDVEGITPIAEALETDNKVKALWLKRNP 1352

Query: 455  IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL--- 511
            +   G + L+ +L+ +  +  L +  C I   G E +   L++N+T+  L +  NGL   
Sbjct: 1353 LLTAGCRPLAAMLEKNSYLQILDVLNCGILDEGVEILFGALQHNSTLRHLYIDTNGLTPK 1412

Query: 512  -----RDEVCSGCNGLSFFHSAIYSL---------------KHMLFYSLCINYL--QGAK 549
                 R  + +G N L   + +   L               K +L   L  N +   G K
Sbjct: 1413 SATTVRKHLETGLNKLETIYMSCNHLGDAGASELAAGLLGDKTLLRLGLSSNCIGPAGTK 1472

Query: 550  CLAQSFKVVNEALTSIDLAF-----------NEIRDDGAFAIAQALKANEDVAVTSLNLA 598
             L  +  + + +L  ++L F           N + D+GA  IA+ ++AN    + S++L 
Sbjct: 1473 ELVDAV-IKHPSLLELNLGFKRGTFLLGSLNNILGDEGANEIARLIRAN--TQIRSIDLT 1529

Query: 599  NNFLTKFGQSALTDA 613
            +N +++ G SAL +A
Sbjct: 1530 HNSISQKGISALREA 1544


>gi|399497866|emb|CCG20261.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497888|emb|CCG20272.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497910|emb|CCG20283.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497918|emb|CCG20287.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497976|emb|CCG20316.1| Ran GTPase activating protein 2 [Solanum phureja]
 gi|399497978|emb|CCG20317.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|320162645|gb|EFW39544.1| hypothetical protein CAOG_00069 [Capsaspora owczarzaki ATCC 30864]
          Length = 402

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 103/182 (56%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N IGDEG + +   L + +  L++L +  N I A GA  + E ++   SL  
Sbjct: 2   LMWLVLDCNQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTSLTR 61

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L+ N IGD GAE IA+AL  N+T+T + LG N I   GA AIA  L+ N+ +  L L 
Sbjct: 62  LELFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQ 121

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           +N +G  GAK L+E LK + ++  L L   QIG  GA+ +A+ L  N T+  L+L  N +
Sbjct: 122 FNQLGNAGAKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLPDNWI 181

Query: 512 RD 513
            +
Sbjct: 182 SE 183



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 118/227 (51%), Gaps = 36/227 (15%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTI-DLGGNNIHSKGASAIARVLKDNSVITS 447
           L+W+ L  N IGDEGA+ IA  L+ N T+ +I  L  N I + GA A+   L+ N+ +T 
Sbjct: 2   LMWLVLDCNQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTSLTR 61

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L+L  N IG  GA+A++E L  +  +  L LG  +IG  GA+ +A  L  N T++ L L+
Sbjct: 62  LELFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQ 121

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            N L +                                 GAK LA++ K VN +LT ++L
Sbjct: 122 FNQLGNA--------------------------------GAKVLAEALK-VNASLTELNL 148

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
             N+I D GA AIA+AL  N    + +LNL +N++++ G   +  A+
Sbjct: 149 CDNQIGDVGAQAIAEALTVN--TTLDNLNLPDNWISEAGVQMIEQAR 193



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 89/177 (50%), Gaps = 2/177 (1%)

Query: 200 NGITAAGIKAFDGVLQSN-IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
           N I   G +    VL++N   L  L L  N IG  G   L + L  N  + RL+L    +
Sbjct: 10  NQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTSLTRLELFDNQI 69

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            D GA+AIAE L  N  L  L L  N I   G  ++A AL  N+T+  LHL  N  G  G
Sbjct: 70  GDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQFNQLGNAG 129

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           A  LA+ L+ N SL EL+L  N IGD G +A+   L+     L  L++ +N IS  G
Sbjct: 130 AKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNT-TLDNLNLPDNWISEAG 185



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 6/199 (3%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           L  L L  N IGDEG + +  +L  N   +  L+L    +   GA A+ E L+ N+ L  
Sbjct: 2   LMWLVLDCNQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTSLTR 61

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           LEL +N I   G  ++AEAL  N T+  L L  N  G +GA A+A  LE N ++ ELHL 
Sbjct: 62  LELFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQ 121

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ G + L   L      L  L++ +N I   GA  +AE +    +L  +NL  N 
Sbjct: 122 FNQLGNAGAKVLAEALKV-NASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLPDNW 180

Query: 399 IGDEGAEKIADALKQNRTI 417
           I + G + I    +Q RT+
Sbjct: 181 ISEAGVQMI----EQARTV 195



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 3/207 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRE-LHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           L L+ N  G  GA  +A+ LE N++L   L L  N IG  G  AL   L      L  L+
Sbjct: 5   LVLDCNQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTS-LTRLE 63

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + +N I   GA  +AE +   ++L  + L  N IG  GA+ IA AL+ N T+  + L  N
Sbjct: 64  LFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQFN 123

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            + + GA  +A  LK N+ +T L+L  N IG  GA+A++E L  +  ++ L L    I  
Sbjct: 124 QLGNAGAKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLPDNWISE 183

Query: 486 SGAEFVADMLRYNNTISI-LDLRANGL 511
           +G + +      NN   + +D + N L
Sbjct: 184 AGVQMIEQARTVNNKTDVFMDDQINPL 210



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 67/135 (49%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +++     GD G   +AE+L  NQT   ++   N I   G +A    L+ N  +  
Sbjct: 58  SLTRLELFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAE 117

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N +G+ G K L + L  NA +  L L    + D GA+AIAE L  N+ L  L L 
Sbjct: 118 LHLQFNQLGNAGAKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLP 177

Query: 283 NNMIDYSGFTSLAEA 297
           +N I  +G   + +A
Sbjct: 178 DNWISEAGVQMIEQA 192



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 59/126 (46%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   G +A    L  N  L  L L  N IG  G + +   L  N  V  L L    L 
Sbjct: 67  NQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQFNQLG 126

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           + GAK +AE LK N+ L  L L +N I   G  ++AEAL  N+T+ +L+L  N+    G 
Sbjct: 127 NAGAKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLPDNWISEAGV 186

Query: 320 NALAKG 325
             + + 
Sbjct: 187 QMIEQA 192


>gi|410340599|gb|JAA39246.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340601|gb|JAA39247.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340603|gb|JAA39248.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340605|gb|JAA39249.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340607|gb|JAA39250.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340609|gb|JAA39251.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
          Length = 461

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 182/427 (42%), Gaps = 13/427 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSD---ARWAELLLLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCKPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSG 518
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D  V   
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDAGVQEL 361

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           C GL    S +     +L+ + C         LA +  + N +L  +DL+ N + D G  
Sbjct: 362 CQGLGQPGSVL----RVLWLADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGIL 416

Query: 579 AIAQALK 585
            + ++++
Sbjct: 417 QLVESVR 423



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 166/356 (46%), Gaps = 5/356 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     K +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCKPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D
Sbjct: 357 GVQELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNKFLLELQISNNRLEDAGVQELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|345803729|ref|XP_854810.2| PREDICTED: uncharacterized protein C14orf166B [Canis lupus
           familiaris]
          Length = 491

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 149/330 (45%), Gaps = 43/330 (13%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L N     ++LN +  G  G  A+A  L  N S+  L L  N + +EGI +L+  L   
Sbjct: 104 FLRNMEESYMNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQEN 163

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRT 416
              L  L++ +N +  KGA  ++E+++   S LW + L  N+  DE AE +  AL  N  
Sbjct: 164 Y-YLQELNVSDNDLGFKGAKIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAANYQ 222

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I T+DL  N    KG   + ++L  N  + SLDL++N     GA AL   L+ +G +  L
Sbjct: 223 IKTLDLSHNQFSDKGGEYMGQMLALNVGLQSLDLSWNHFYIRGAVALCNGLRANGTLQKL 282

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHM 535
            L     G  GA  + ++LR N+++  LD+  N + +E +     GL F           
Sbjct: 283 DLSMNGFGNEGATALGEVLRLNSSLVYLDISINDISNEGISKISKGLEF----------- 331

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-----EDV 590
                                  NE+L  + L  N +  DGA  +  ++K N     E++
Sbjct: 332 -----------------------NESLKVLKLFLNPMSMDGAVLLILSIKRNPKSKMEEI 368

Query: 591 AVTSLNLANNFLTKF-GQSALTDAKDLVYE 619
            ++++ ++  FL    G  A+    D+VY+
Sbjct: 369 DISNVLVSEQFLKILDGVCAIHPQLDVVYK 398



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 32/315 (10%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N +   +  A NG+   GI +   +LQ N  L+ LN
Sbjct: 111 SYMNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQENYYLQELN 170

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G +G K + + L  N + +  LQLS  + RDE A+ + + L  N  ++ L+L++
Sbjct: 171 VSDNDLGFKGAKIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAANYQIKTLDLSH 230

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   + + L  N  ++SL L+ N+    GA AL  GL  N +L++L L  N  G
Sbjct: 231 NQFSDKGGEYMGQMLALNVGLQSLDLSWNHFYIRGAVALCNGLRANGTLQKLDLSMNGFG 290

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL                              E ++   SL+++++ +NDI +EG
Sbjct: 291 NEGATAL-----------------------------GEVLRLNSSLVYLDISINDISNEG 321

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAK 461
             KI+  L+ N ++  + L  N +   GA  +   +K N  S +  +D++   +     K
Sbjct: 322 ISKISKGLEFNESLKVLKLFLNPMSMDGAVLLILSIKRNPKSKMEEIDISNVLVSEQFLK 381

Query: 462 ALSEVLKFHGNINTL 476
            L  V   H  ++ +
Sbjct: 382 ILDGVCAIHPQLDVV 396



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V  L+L+   L +EG  ++ E+L+ N  L
Sbjct: 107 NMEESYMNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQENYYL 166

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N + + G   ++E L  N S++ +L L+GN      A  L + L  N  ++ L
Sbjct: 167 QELNVSDNDLGFKGAKIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAANYQIKTL 226

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D+G   +   L+   G L  LD+  N    +GA  +   ++   +L  ++L 
Sbjct: 227 DLSHNQFSDKGGEYMGQMLALNVG-LQSLDLSWNHFYIRGAVALCNGLRANGTLQKLDLS 285

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+EGA  + + L+ N ++  +D+  N+I ++G S I++ L+ N  +  L L  NP+
Sbjct: 286 MNGFGNEGATALGEVLRLNSSLVYLDISINDISNEGISKISKGLEFNESLKVLKLFLNPM 345

Query: 456 GADGAKAL 463
             DGA  L
Sbjct: 346 SMDGAVLL 353



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 120/228 (52%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N +   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 124 GTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQENYYLQELNVSDNDLGFKGAKI 183

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +++ L+ N  SL  L L GN+  DE    L   L++   ++  LD+ +N  S KG  ++ 
Sbjct: 184 ISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAANY-QIKTLDLSHNQFSDKGGEYMG 242

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N T+  +DL  N   ++GA+A+  VL+
Sbjct: 243 QMLALNVGLQSLDLSWNHFYIRGAVALCNGLRANGTLQKLDLSMNGFGNEGATALGEVLR 302

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD++ N I  +G   +S+ L+F+ ++  LKL    +   GA
Sbjct: 303 LNSSLVYLDISINDISNEGISKISKGLEFNESLKVLKLFLNPMSMDGA 350



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 1/150 (0%)

Query: 142 FTGKLFR-ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
            +G  FR ES + L +         ++D+S   F D+G  ++ + L  N   + +  + N
Sbjct: 200 LSGNNFRDESAELLCQALAANYQIKTLDLSHNQFSDKGGEYMGQMLALNVGLQSLDLSWN 259

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
                G  A    L++N  L+ L+LS N  G+EG   L ++L  N+ +  L +S  D+ +
Sbjct: 260 HFYIRGAVALCNGLRANGTLQKLDLSMNGFGNEGATALGEVLRLNSSLVYLDISINDISN 319

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           EG   I++ L+ N  L+VL+L  N +   G
Sbjct: 320 EGISKISKGLEFNESLKVLKLFLNPMSMDG 349


>gi|146089485|ref|XP_001470396.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|398016901|ref|XP_003861638.1| hypothetical protein, conserved [Leishmania donovani]
 gi|134070429|emb|CAM68769.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322499865|emb|CBZ34938.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 429

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 140/269 (52%), Gaps = 5/269 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-ALK 221
           A S + ++    G EG    A++L  N     +  + N +  +G +   G+L++++ AL+
Sbjct: 111 ALSRLGLASNRLGPEGAALAAKALERNTYLSSLDLSVNELGPSGAECLAGILRNSVSALR 170

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G  GV  +CD +  N  + RL L +    DE A A+A +L+ N  L  L++
Sbjct: 171 VLQLHGNYLGPTGVIAICDAVRTNKELRRLTLGNNHATDEAAGAVAAMLEANDTLEELDI 230

Query: 282 NNNMIDYSGF-TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS--LRELHLH 338
             N +  +G  T + + L +N+++  L L+GN  G +GAN L + L  ++   L +L L 
Sbjct: 231 RLNTLTANGVRTIVQQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLS 290

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
              +   G  A ++ L S    L  +++ +N++  + A  +A+ I +  ++  +++  N 
Sbjct: 291 SCGLTASG-GARVASLLSTSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNK 349

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNI 427
           IG+EGA ++ DA  +N  +  +   GNNI
Sbjct: 350 IGEEGASQLIDAALRNAQLVALVTNGNNI 378



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 145/294 (49%), Gaps = 3/294 (1%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LA  +  + + + +    N ++A+ +      +  + AL  L L+ N +G 
Sbjct: 65  DIGKEGCDGLAGVVNLSHSLQVLDIRGNHLSASDVHRLLRSVSMSTALSRLGLASNRLGP 124

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGF 291
           EG       L  N  +  L LS  +L   GA+ +A +L+N+ S LRVL+L+ N +  +G 
Sbjct: 125 EGAALAAKALERNTYLSSLDLSVNELGPSGAECLAGILRNSVSALRVLQLHGNYLGPTGV 184

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++ +A+  N  +R L L  N+     A A+A  LE N +L EL +  N++   G+R ++
Sbjct: 185 IAICDAVRTNKELRRLTLGNNHATDEAAGAVAAMLEANDTLEELDIRLNTLTANGVRTIV 244

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG--DEGAEKIAD 409
               ++   LAVL +  N +   GA  + + + + +  +   L ++  G    G  ++A 
Sbjct: 245 QQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLSSCGLTASGGARVAS 304

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            L  + ++  I+L  N +  + A  +A+ + D   I+ +D++ N IG +GA  L
Sbjct: 305 LLSTSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQL 358



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 4/298 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + T++L  N +G  G   +   L +++ V  + +   D+  EG   +A ++  +  L+VL
Sbjct: 29  IHTIDLMDNQLGPTGAVKIASCL-ESSPVTEVFICYNDIGKEGCDGLAGVVNLSHSLQVL 87

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++  N +  S    L  ++  ++ +  L L  N  G  GA   AK LE N  L  L L  
Sbjct: 88  DIRGNHLSASDVHRLLRSVSMSTALSRLGLASNRLGPEGAALAAKALERNTYLSSLDLSV 147

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +G  G   L   L +    L VL +  N +   G   + + ++  K L  + L  N  
Sbjct: 148 NELGPSGAECLAGILRNSVSALRVLQLHGNYLGPTGVIAICDAVRTNKELRRLTLGNNHA 207

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNPIGAD 458
            DE A  +A  L+ N T+  +D+  N + + G   I +  L  N+ +  L L+ N +G  
Sbjct: 208 TDEAAGAVAAMLEANDTLEELDIRLNTLTANGVRTIVQQGLAKNTSLAVLSLSGNEVGPV 267

Query: 459 GAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           GA  L++VL  H    +  L L  C + ASG   VA +L  + ++  ++L  N L DE
Sbjct: 268 GANELTQVLTSHQRSVLEQLDLSSCGLTASGGARVASLLSTSMSLKEINLSDNALDDE 325



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 127/252 (50%), Gaps = 14/252 (5%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+ +N +   GA  +A  +++   +  + +  NDIG EG + +A  +  + ++  +D+ 
Sbjct: 32  IDLMDNQLGPTGAVKIASCLES-SPVTEVFICYNDIGKEGCDGLAGVVNLSHSLQVLDIR 90

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN++ +     + R +  ++ ++ L LA N +G +GA   ++ L+ +  +++L L   ++
Sbjct: 91  GNHLSASDVHRLLRSVSMSTALSRLGLASNRLGPEGAALAAKALERNTYLSSLDLSVNEL 150

Query: 484 GASGAEFVADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           G SGAE +A +LR + + + +L L  N L      G  G+     A+ + K +   +L  
Sbjct: 151 GPSGAECLAGILRNSVSALRVLQLHGNYL------GPTGVIAICDAVRTNKELRRLTLGN 204

Query: 543 NYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA-QALKANEDVAVTSLNLAN 599
           N+   + A  +A   +  N+ L  +D+  N +  +G   I  Q L  N  +AV  L+L+ 
Sbjct: 205 NHATDEAAGAVAAMLE-ANDTLEELDIRLNTLTANGVRTIVQQGLAKNTSLAV--LSLSG 261

Query: 600 NFLTKFGQSALT 611
           N +   G + LT
Sbjct: 262 NEVGPVGANELT 273



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 6/205 (2%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSN 217
           KELR  +   +   +  DE    +A  L  N T EE+    N +TA G++      L  N
Sbjct: 195 KELRRLT---LGNNHATDEAAGAVAAMLEANDTLEELDIRLNTLTANGVRTIVQQGLAKN 251

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            +L  L+LSGN +G  G   L  +L  +  + +E+L LSS  L   G   +A LL  +  
Sbjct: 252 TSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLSSCGLTASGGARVASLLSTSMS 311

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ + L++N +D      LA+ + +  TI  + ++ N  G  GA+ L      N  L  L
Sbjct: 312 LKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQLIDAALRNAQLVAL 371

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGK 360
             +GN+I     + L + L  R  K
Sbjct: 372 VTNGNNISRAAQKRLDNLLEERLAK 396


>gi|157823287|ref|NP_001102706.1| nucleotide-binding oligomerization domain-containing protein 1
           [Rattus norvegicus]
 gi|149033305|gb|EDL88106.1| similar to Caspase recruitment domain protein 4 (predicted) [Rattus
           norvegicus]
          Length = 953

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +T + LG N I S+G   +A+ +K+++ I  + +  N IG +GAKA +E
Sbjct: 775 YVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++ TL L +  I   G + +A  L+ N T++I+ L  N L DE           
Sbjct: 835 ALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDE----------- 883

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+C A+  + VN+ L  + L  N I  +G   +A+AL+
Sbjct: 884 ---------------------AAECFAEMLR-VNQTLKHLWLIQNHITAEGTAQLARALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 KNTTITEICLN 932



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 1/213 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K + E L    I+  L L NN I   G   +A+ L E   +  L L 
Sbjct: 733 IRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLG 792

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   +A+ ++ + S+ E+ + GN IGDEG +A    L      L  L +  N 
Sbjct: 793 KNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPS-LTTLSLAFNG 851

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS +G   +A+ +K   +L  I L  N++ DE AE  A+ L+ N+T+  + L  N+I ++
Sbjct: 852 ISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKHLWLIQNHITAE 911

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           G + +AR L+ N+ IT + L  N I  + AK  
Sbjct: 912 GTAQLARALQKNTTITEICLNGNLIKPEEAKVF 944



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 87/170 (51%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A+ L   +    +    N IT+ G +     ++++ ++  + + GN IGDEG 
Sbjct: 770 DIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L D+  +  L L+   +  EG K++A+ LK N+ L ++ L  N ++       A
Sbjct: 830 KAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N+  A G   LA+ L+ N ++ E+ L+GN I  E
Sbjct: 890 EMLRVNQTLKHLWLIQNHITAEGTAQLARALQKNTTITEICLNGNLIKPE 939



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 77/153 (50%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E R  + + +       EG   +A+++  + +  EV    N I   G KAF   L+ + +
Sbjct: 782 ECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +  + L+  +L DE A+  AE+L+ N  L+ L
Sbjct: 842 LTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA AL +N+TI  + LNGN
Sbjct: 902 WLIQNHITAEGTAQLARALQKNTTITEICLNGN 934



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 84/189 (44%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     L  L L 
Sbjct: 733 IRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG +C+   + ++  +  + +    + DEGAKA AE L+++  L  L L  N I
Sbjct: 793 KNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA+AL +N+T+  + L  N      A   A+ L  N++L+ L L  N I  EG
Sbjct: 853 SPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKHLWLIQNHITAEG 912

Query: 347 IRALMSGLS 355
              L   L 
Sbjct: 913 TAQLARALQ 921



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V M G   GDEG    AE+L  + +   +S A NGI+  G K+    L+ N  L  + L+
Sbjct: 817 VGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLT 876

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N + DE  +C  ++L  N  ++ L L    +  EG   +A  L+ N+ +  + LN N+I
Sbjct: 877 KNELNDEAAECFAEMLRVNQTLKHLWLIQNHITAEGTAQLARALQKNTTITEICLNGNLI 936


>gi|57529989|ref|NP_001006473.1| ribonuclease inhibitor [Gallus gallus]
 gi|53134140|emb|CAG32305.1| hypothetical protein RCJMB04_22k18 [Gallus gallus]
          Length = 456

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 185/412 (44%), Gaps = 18/412 (4%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-I 241
           AE L   ++   +      ++++  K    ++ +N +LK L L+ N +GD G++ LC  +
Sbjct: 16  AELLSTMKSCSTIRLDDCNLSSSNCKDLSSIIHTNPSLKELKLNNNELGDAGIEYLCKGL 75

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-E 300
           L  +  +++L L + +L     + +  +L     L  L + +N +  +G   L + L+  
Sbjct: 76  LTPSCSLQKLWLQNCNLTSASCETLRSVLSAQPSLTELHVGDNKLGTAGVKVLCQGLMNP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N  ++ L L      A    AL   L+   +L+EL L  N++GD  ++ L  GL      
Sbjct: 136 NCKLQKLQLEYCELTADIVEALNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLVEASCD 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITT 419
           L +L + N  I++     ++  + +  SLL + +  N IGD G   +    L  N  I  
Sbjct: 196 LELLHLENCGITSDSCRDISAVLSSKPSLLDLAVGDNKIGDTGLALLCQGLLHPNCKIQK 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKL 478
           + L   ++ S     ++RV      +  + L  N +   G + L + LK    ++  L +
Sbjct: 256 LWLWDCDLTSASCKDLSRVFSTKETLLEVSLIDNNLRDSGMEMLCQALKDPKAHLQELWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRD---EVCSGCNGLSFFHSAIYSLKHM 535
             C + A+  + V+ +L  N  + +L +  N L +   E+   C GL   +  I+S    
Sbjct: 316 RECGLTAACCKAVSSVLSVNKHLQVLHIGENKLGNAGVEI--LCEGLLHPNCNIHS---- 369

Query: 536 LFYSLCINYLQGAKCLAQ--SFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           L+     N    A C A   +  V  + LT +DL++N + D+G   + +A++
Sbjct: 370 LWLG---NCDITAACCATLANVMVTKQNLTELDLSYNTLEDEGVMKLCEAVR 418



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 4/327 (1%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITA 204
           L   S +TL        + + + +     G  G+  L + L   N   +++      +TA
Sbjct: 92  LTSASCETLRSVLSAQPSLTELHVGDNKLGTAGVKVLCQGLMNPNCKLQKLQLEYCELTA 151

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGA 263
             ++A +  LQ+   LK L+LS N +GD  VK LC  LV+ +  +E L L +  +  +  
Sbjct: 152 DIVEALNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLVEASCDLELLHLENCGITSDSC 211

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
           + I+ +L +   L  L + +N I  +G   L + LL  N  I+ L L      +     L
Sbjct: 212 RDISAVLSSKPSLLDLAVGDNKIGDTGLALLCQGLLHPNCKIQKLWLWDCDLTSASCKDL 271

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           ++     ++L E+ L  N++ D G+  L   L   K  L  L +    ++A     V+  
Sbjct: 272 SRVFSTKETLLEVSLIDNNLRDSGMEMLCQALKDPKAHLQELWVRECGLTAACCKAVSSV 331

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +   K L  +++  N +G+ G E + +  L  N  I ++ LG  +I +   + +A V+  
Sbjct: 332 LSVNKHLQVLHIGENKLGNAGVEILCEGLLHPNCNIHSLWLGNCDITAACCATLANVMVT 391

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLK 468
              +T LDL+YN +  +G   L E ++
Sbjct: 392 KQNLTELDLSYNTLEDEGVMKLCEAVR 418


>gi|242062340|ref|XP_002452459.1| hypothetical protein SORBIDRAFT_04g026160 [Sorghum bicolor]
 gi|241932290|gb|EES05435.1| hypothetical protein SORBIDRAFT_04g026160 [Sorghum bicolor]
          Length = 558

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S  +L+ L +  + I +E  K L +++     ++ L   
Sbjct: 234 LNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFH 293

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA  IAE++K +  +     +   I   G  +L+EAL   + ++ L L  N  
Sbjct: 294 NNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLF 353

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L EL+L   ++ +EG  A++  L     +L VL++  N I+AK
Sbjct: 354 GVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIAIVKALKQSAPQLEVLEMAGNEINAK 413

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            A  +AE +   +SL  + L  N++ D GA  IA +L+   T +  +D+  N +   GA 
Sbjct: 414 AAPDLAECLTAMQSLKKLTLAENELKDGGAVIIAKSLEDGHTDLKELDVSTNMLQRVGAR 473

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             AR + D      L++  N I  +G   + E+LK
Sbjct: 474 CFARAVADKPAFVQLNINGNFISDEGIDEVKEILK 508



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 131/303 (43%), Gaps = 31/303 (10%)

Query: 144 GKLFRESKQTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           G+   E+   +  F+K L       +++S    G++G+   +E L   ++ EE+    +G
Sbjct: 209 GRPEDEALDVMRIFSKALEGSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDG 268

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I+    KA   ++ +   LK L+   N  GDEG   + +++  +  VE  + S+  +  +
Sbjct: 269 ISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSD 328

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENS---- 302
           G  A++E L   + L+ L+L +N+       +L++ L               LEN     
Sbjct: 329 GGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIA 388

Query: 303 ----------TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                      +  L + GN   A  A  LA+ L   +SL++L L  N + D G   +  
Sbjct: 389 IVKALKQSAPQLEVLEMAGNEINAKAAPDLAECLTAMQSLKKLTLAENELKDGGAVIIAK 448

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  LD+  N +   GA   A  + +  + + +N+  N I DEG +++ + LK
Sbjct: 449 SLEDGHTDLKELDVSTNMLQRVGARCFARAVADKPAFVQLNINGNFISDEGIDEVKEILK 508

Query: 413 QNR 415
             +
Sbjct: 509 AGK 511



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 94/220 (42%), Gaps = 30/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG  ++AE +  +   E    +A  I + G  A    L +   LK L+L  N  G + 
Sbjct: 298 GDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDA 357

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L     +  L LS ++L +EG  AI + LK ++  L VLE+  N I+      
Sbjct: 358 GLALSKTLPKLPDLVELYLSDLNLENEGTIAIVKALKQSAPQLEVLEMAGNEINAKAAPD 417

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLREL----------------- 335
           LAE L    +++ L L  N     GA  +AK LE G+  L+EL                 
Sbjct: 418 LAECLTAMQSLKKLTLAENELKDGGAVIIAKSLEDGHTDLKELDVSTNMLQRVGARCFAR 477

Query: 336 -----------HLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                      +++GN I DEGI  +   L + K  L VL
Sbjct: 478 AVADKPAFVQLNINGNFISDEGIDEVKEILKAGKKSLDVL 517



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 109/242 (45%), Gaps = 25/242 (10%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L ++N+  N +G++G    ++ LK   ++  + +  + I  + A A++ ++     +  L
Sbjct: 231 LRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVL 290

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
               N  G +GA  ++E++K   N+ + +    +IG+ G   +++ L     +  LDLR 
Sbjct: 291 HFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRD 350

Query: 509 N---------------GLRDEVCSGCNGLSFFHSAIYSLKHMLFYS---LCINYLQGAKC 550
           N                L D V    + L+  +    ++   L  S   L +  + G + 
Sbjct: 351 NLFGVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIAIVKALKQSAPQLEVLEMAGNEI 410

Query: 551 LAQSFKVVNEALTSID------LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            A++   + E LT++       LA NE++D GA  IA++L+      +  L+++ N L +
Sbjct: 411 NAKAAPDLAECLTAMQSLKKLTLAENELKDGGAVIIAKSLEDGH-TDLKELDVSTNMLQR 469

Query: 605 FG 606
            G
Sbjct: 470 VG 471


>gi|399497856|emb|CCG20256.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497864|emb|CCG20260.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|297695587|ref|XP_002825013.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Pongo abelii]
          Length = 488

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ + SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLAKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+E A  + + L+ N  +  +D+ GN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      LA LD+ 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLAKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 118/228 (51%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S  G  H+ 
Sbjct: 181 ISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNY-RIKKLDLSHNQFSDVGGEHLG 239

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N+    GA  + + L+ N T+  +DL  N + ++ A A+  VL+
Sbjct: 240 QMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLAKLDLSMNGLGNEVALALGEVLR 299

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD++ N IG +GA  +S+ L+ + ++  LKL    I   GA
Sbjct: 300 LNSCLVYLDISGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGA 347



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 137/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNTA-VTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 168

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + + +++L GN+   + A+ + + L  N  I  LDL++N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKLDLSHN 228

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NGL +
Sbjct: 229 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLAKLDLSMNGLGN 288

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 289 EVA-------------LALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLES-NESLRV 334

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 335 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE-EVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 ESAALLGQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +      +L E L  NS +  L ++GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLAKLDLSMNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N  +T ++L  N I  +G  +
Sbjct: 94  GVVPVSYFIRNMEES-YVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 152

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ +S+  + + + + +L+L         A  +  
Sbjct: 153 LVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQ 212

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  I  LDL  N   D                                 G + L Q
Sbjct: 213 ALSTNYRIKKLDLSHNQFSD--------------------------------VGGEHLGQ 240

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
               +N  LTS+DL++N     GA A+   L+ N  V +  L+L+ N L
Sbjct: 241 ML-AINVGLTSLDLSWNNFHTRGAVALCNGLRGN--VTLAKLDLSMNGL 286


>gi|357440741|ref|XP_003590648.1| Ran GTPase activating protein [Medicago truncatula]
 gi|355479696|gb|AES60899.1| Ran GTPase activating protein [Medicago truncatula]
          Length = 507

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 28/282 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA+AEL+ +   L+VL
Sbjct: 190 LRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKVL 249

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++A+ +  +  +     +    GA G  ALA+ L     L++L L  
Sbjct: 250 HFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRD 309

Query: 340 NSIG----------------------------DEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G                            D+G  AL + L      L +LD+  N I
Sbjct: 310 NMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESAPSLEILDMAGNDI 369

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           +AK A  VAE I + + L  +NL  N++ DEGA  I+ AL+    ++ +DL  N I   G
Sbjct: 370 TAKTAVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGLGQLSEVDLSTNLITWSG 429

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           A  +A  +        L++  N I  +G   L ++ K   +I
Sbjct: 430 AKLLAEAVVQKPGFKLLNVNANFISDEGIDELKDIFKNSPDI 471



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 143/295 (48%), Gaps = 38/295 (12%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 179 NIFSSALEG-AVLRHLNLSNNAMGEKGVRAFRALLKSQN-DLEELYLMNDGISEEAAKAV 236

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I + + L  ++ + N  GDEGA  IAD +K++  +         + ++G  A+A  L
Sbjct: 237 AELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEAL 296

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+V+    ++  + L +  +   GAE +A+ L+ + 
Sbjct: 297 GACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESA 356

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            ++ ILD+  N +                   + K  +  + CI+  Q            
Sbjct: 357 PSLEILDMAGNDI-------------------TAKTAVSVAECISSKQ------------ 385

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              LT ++L+ NE++D+GA  I++AL+      ++ ++L+ N +T  G   L +A
Sbjct: 386 --FLTKLNLSENELKDEGAGLISKALEGL--GQLSEVDLSTNLITWSGAKLLAEA 436



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 21/368 (5%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           E +K + E+LK     R  E N  +I   G  ++ E + + S  R   ++G       A+
Sbjct: 65  ESSKLMLEVLKRGP--RGKEENGELISEKGDAAV-ETVFDISGGRRAFIDGEE-----AS 116

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L K L G  S   +     S G +    +   L S K +L  +D+ ++ I+ +      
Sbjct: 117 ELLKPLMGPNSFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDL-SDFIAGRPEAEAI 175

Query: 381 EYIKNCKSLL------WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           E +    S L       +NL  N +G++G       LK    +  + L  + I  + A A
Sbjct: 176 EVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKA 235

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A ++     +  L    N  G +GA A+++V+K    +   +    ++GA G   +A+ 
Sbjct: 236 VAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEA 295

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L     +  LDLR N     V +G   LS        L  +    L +    GA+ LA +
Sbjct: 296 LGACTHLKKLDLRDNMFG--VEAGV-ALSKVIPVFADLTEIYLSYLNLED-DGAEALANA 351

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
            K    +L  +D+A N+I    A ++A+ + + +   +T LNL+ N L   G   ++ A 
Sbjct: 352 LKESAPSLEILDMAGNDITAKTAVSVAECISSKQ--FLTKLNLSENELKDEGAGLISKAL 409

Query: 615 DLVYEMSE 622
           + + ++SE
Sbjct: 410 EGLGQLSE 417


>gi|217074422|gb|ACJ85571.1| unknown [Medicago truncatula]
          Length = 533

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 154/346 (44%), Gaps = 36/346 (10%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITAAGIKA---FDGVLQ 215
           +F+++  S R+FG +    +   L       +EV    F A    A  I+    F   L+
Sbjct: 153 SFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEAEAIEVMNIFSSALE 212

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             + L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA+AEL+     
Sbjct: 213 GAV-LRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPFTEK 271

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+VL  +NNM    G  ++A+ +  +  +     +    GA G  ALA+ L     L++L
Sbjct: 272 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 331

Query: 336 HLHGNSIG----------------------------DEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  G                            D+G  AL + L      L +LD+ 
Sbjct: 332 DLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESAPSLEILDMA 391

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N I+AK A  VAE I + + L  +NL  N++ DEGA  I+ AL+    ++ +DL  N I
Sbjct: 392 GNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGLGQLSEVDLSTNLI 451

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
              GA  +A  +        L++  N I  +G   L ++ K   +I
Sbjct: 452 TWSGAKLLAEAVVQKPGFKLLNVNANFISDEGIDELKDIFKNSPDI 497



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 38/295 (12%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSSALEG-AVLRHLNLSNNAMGEKGVRAFRALLKSQ-NDLEELYLMNDGISEEAAKAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I   + L  ++ + N  GDEGA  IAD +K++  +         + ++G  A+A  L
Sbjct: 263 AELIPFTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+V+    ++  + L +  +   GAE +A+ L+ + 
Sbjct: 323 GACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            ++ ILD+  N +                   + K  +  + CI+  Q            
Sbjct: 383 PSLEILDMAGNDI-------------------TAKTAVSVAECISSKQ------------ 411

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              LT ++L+ NE++D+GA  I++AL+      ++ ++L+ N +T  G   L +A
Sbjct: 412 --FLTKLNLSENELKDEGAGLISKALEGL--GQLSEVDLSTNLITWSGAKLLAEA 462



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 21/368 (5%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           E +K + E+LK     R  E N  +I   G  ++ E + + S  R   ++G       A+
Sbjct: 91  ESSKLMLEVLKRGP--RGKEENGELISEKGDAAV-ETVFDISGGRRAFIDGEE-----AS 142

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L K L G  S   +     S G +    +   L S K +L  +D+ ++ I+ +      
Sbjct: 143 ELLKPLMGPNSFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDL-SDFIAGRPEAEAI 201

Query: 381 EYIKNCKSLL------WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           E +    S L       +NL  N +G++G       LK    +  + L  + I  + A A
Sbjct: 202 EVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKA 261

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A ++     +  L    N  G +GA A+++V+K    +   +    ++GA G   +A+ 
Sbjct: 262 VAELIPFTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEA 321

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L     +  LDLR N     V +G   LS        L  +    L +    GA+ LA +
Sbjct: 322 LGACTHLKKLDLRDNMFG--VEAGV-ALSKVIPVFADLTEIYLSYLNLED-DGAEALANA 377

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
            K    +L  +D+A N+I    A ++A+ + + +   +T LNL+ N L   G   ++ A 
Sbjct: 378 LKESAPSLEILDMAGNDITAKTAVSVAECISSKQ--FLTKLNLSENELKDEGAGLISKAL 435

Query: 615 DLVYEMSE 622
           + + ++SE
Sbjct: 436 EGLGQLSE 443


>gi|146164011|ref|XP_001012841.2| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|146145873|gb|EAR92596.2| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 1225

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 245/510 (48%), Gaps = 60/510 (11%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAE--EVSFAANGITAAGIKAFDGVLQ--SNIALK 221
           ++++S     D+GL F+A  L  N+  E  E++   N  ++ GIK     L+   +I+  
Sbjct: 350 NLNLSQSQICDQGLTFIASGLSENELIEVLELNLQNNKFSSQGIKEISDSLKMFKHISEL 409

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            L+L    I D+ +  +   +     + +  L L    +   G K I + +KN   L +L
Sbjct: 410 KLSLMNCKIDDDAIGFISKAIQTYENITKFSLNLYQNQITSSGVKEIEKAIKNYKKLVIL 469

Query: 280 ELN--NNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +LN   N ID +G  S+A+ L  L       L LN    G  GAN LA  ++  ++L EL
Sbjct: 470 DLNLEYNSIDETGAQSIADGLHKLTKLIYLKLKLNSCKIGKRGANHLANAIQNLQNLIEL 529

Query: 336 --HLHGNSIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKGAFHVAEYIKNCK--SLL 390
             HL  +SI  EG   ++  +  ++G K   L++ NN+IS+ GA  +A  I+  +  S+L
Sbjct: 530 ILHLSSSSIQVEGANNILKAIEIKRGLKFLSLNLCNNNISSLGASAIANSIEKLQNVSIL 589

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTI--DLGGNNIHSKGASAIARVLKDNSVITS- 447
            + +  N IG + A+ I+ AL++ + I+ +  +L   +       A++ +L+    I + 
Sbjct: 590 HLQIQKNVIGVDAAKSISMALEKQQNISELFLNLFNESYDLDSIIALSNILEKQKKIDNF 649

Query: 448 -LDLAYNPIGADGAKALSEVLKFHGNINTL--KLGWCQIGASGAEFVADMLR-------- 496
            +++  N IG++G K +S+VL+   ++ +L  +LG   I   G +++A  ++        
Sbjct: 650 LIEVTKNIIGSEGTKYISQVLQNFQSLTSLSLRLGKNVICDEGIKYIAQAIKKFKHIIEF 709

Query: 497 -------YNNTISILDL-RANGLRDEVCSGC----------NGLSFFHSAIYSLKHMLFY 538
                  Y NT+ ++++ +A G    V S            NGL    + I   K ++  
Sbjct: 710 YLTAENNYINTVGLINIVQAMGGYQNVQSLTLQFDQNMIEDNGLMSLSNLIQKYKSLI-- 767

Query: 539 SLCINY------LQGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
           SL +++      LQG K ++ S K+        ++L   +I DDG   I++ ++A +++ 
Sbjct: 768 SLTLSFENNKFSLQGIKEISDSLKIFKHMNKLKLNLMNCKIDDDGIGLISKGIQAYDNIT 827

Query: 592 VTSLNLANNFLTKFG----QSALTDAKDLV 617
             SLNL +N ++  G    + A+ + K LV
Sbjct: 828 KFSLNLCHNSISSSGVKKIEKAIKNYKKLV 857



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 240/516 (46%), Gaps = 78/516 (15%)

Query: 178 GLFFLAESLGYNQTAEEVSFAAN----GITAAGIKAFDGVLQSNIALK--TLNLSGNPIG 231
           GL  +A+SL +    + VS   N    G+T + IK     + +   LK   LNLS + I 
Sbjct: 302 GLKSIADSLKH--LKDVVSLNINLENIGVTNSNIKNIAQSISNMKNLKDLNLNLSQSQIC 359

Query: 232 DEGVKCLCDILVDNAGVERLQLS--SVDLRDEGAKAIAE---LLKNNSILRVLELNNNMI 286
           D+G+  +   L +N  +E L+L+  +     +G K I++   + K+ S L+ L L N  I
Sbjct: 360 DQGLTFIASGLSENELIEVLELNLQNNKFSSQGIKEISDSLKMFKHISELK-LSLMNCKI 418

Query: 287 DYS--GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL--RELHLHGNSI 342
           D    GF S A    EN T  SL+L  N   + G   + K ++  K L   +L+L  NSI
Sbjct: 419 DDDAIGFISKAIQTYENITKFSLNLYQNQITSSGVKEIEKAIKNYKKLVILDLNLEYNSI 478

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNS--ISAKGAFHVAEYIKNCKSLLWINLYMND-- 398
            + G +++  GL  +  KL  L +  NS  I  +GA H+A  I+N ++L+ + L+++   
Sbjct: 479 DETGAQSIADGLH-KLTKLIYLKLKLNSCKIGKRGANHLANAIQNLQNLIELILHLSSSS 537

Query: 399 IGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLK--DNSVITSLDLAYNP 454
           I  EGA  I  A++  R +   +++L  NNI S GASAIA  ++   N  I  L +  N 
Sbjct: 538 IQVEGANNILKAIEIKRGLKFLSLNLCNNNISSLGASAIANSIEKLQNVSILHLQIQKNV 597

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQ-------------------------------- 482
           IG D AK++S  L+   NI+ L L                                    
Sbjct: 598 IGVDAAKSISMALEKQQNISELFLNLFNESYDLDSIIALSNILEKQKKIDNFLIEVTKNI 657

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           IG+ G ++++ +L+   +++ L LR    ++ +C    G+ +   AI   KH++ +    
Sbjct: 658 IGSEGTKYISQVLQNFQSLTSLSLRLG--KNVICDE--GIKYIAQAIKKFKHIIEF---- 709

Query: 543 NYLQGAKCLAQSFKVVN--------EALTSIDLAF--NEIRDDGAFAIAQALKANEDVAV 592
            YL        +  ++N        + + S+ L F  N I D+G  +++  ++  + +  
Sbjct: 710 -YLTAENNYINTVGLINIVQAMGGYQNVQSLTLQFDQNMIEDNGLMSLSNLIQKYKSLIS 768

Query: 593 TSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 628
            +L+  NN  +  G   ++D+  +   M++ ++N+ 
Sbjct: 769 LTLSFENNKFSLQGIKEISDSLKIFKHMNKLKLNLM 804



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 192/426 (45%), Gaps = 62/426 (14%)

Query: 215  QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKN 272
            Q NI+   LNL       + +  L +IL     ++   ++++   +  EG K I+++L+N
Sbjct: 613  QQNISELFLNLFNESYDLDSIIALSNILEKQKKIDNFLIEVTKNIIGSEGTKYISQVLQN 672

Query: 273  NSILRVLELN--NNMIDYSGFTSLAEALLENSTIRSLHLNG--NYGGALGANALAKGLEG 328
               L  L L    N+I   G   +A+A+ +   I   +L    NY   +G   + + + G
Sbjct: 673  FQSLTSLSLRLGKNVICDEGIKYIAQAIKKFKHIIEFYLTAENNYINTVGLINIVQAMGG 732

Query: 329  NKSLRELHLH--GNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKN 385
             ++++ L L    N I D G+ +L + +   K  +++ L   NN  S +G   +++ +K 
Sbjct: 733  YQNVQSLTLQFDQNMIEDNGLMSLSNLIQKYKSLISLTLSFENNKFSLQGIKEISDSLKI 792

Query: 386  CKSL--LWINLYMNDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLKD 441
             K +  L +NL    I D+G   I+  ++    IT  +++L  N+I S G   I + +K+
Sbjct: 793  FKHMNKLKLNLMNCKIDDDGIGLISKGIQAYDNITKFSLNLCHNSISSSGVKKIEKAIKN 852

Query: 442  NSVITSLDLAY--NPIGADGAKALSEVLKFHGNIN--TLKLGWCQIGASGAEFVADMLR- 496
               +  LDL    N I   GA+++++ L     +N   LKL  C IG  GA  +A+ ++ 
Sbjct: 853  YKKLVKLDLNLKCNLINETGAQSIADGLHKLTKLNYLKLKLNQCNIGKRGANHLANAIQN 912

Query: 497  YNNTIS-ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI---NY-------- 544
              N I  IL L ++ ++ E   G N +     AI   + + F SL +   NY        
Sbjct: 913  LQNLIELILHLNSSSIQVE---GANNIL---KAIEKKRDLKFLSLDLSNENYDLDSIKDL 966

Query: 545  -----------------------LQGAKCLAQSFKVVNEALTSIDLAF--NEIRDDGAFA 579
                                    +G KC++Q  +   ++LTS+ L    N I D+G   
Sbjct: 967  SNTLEKQKKIDKFLIEVTDNIISYEGTKCISQVLQNF-QSLTSLSLRLEKNFICDEGIKY 1025

Query: 580  IAQALK 585
            IAQA+K
Sbjct: 1026 IAQAIK 1031



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 117/486 (24%), Positives = 220/486 (45%), Gaps = 50/486 (10%)

Query: 149  ESKQTLNEFAKELRAFSSVDMS-GRN-FGDEGLFFLAESLGYNQTAEEVSFAA--NGITA 204
            E  + +++  +  ++ +S+ +  G+N   DEG+ ++A+++   +   E    A  N I  
Sbjct: 661  EGTKYISQVLQNFQSLTSLSLRLGKNVICDEGIKYIAQAIKKFKHIIEFYLTAENNYINT 720

Query: 205  AG----IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS--SVDL 258
             G    ++A  G    N+   TL    N I D G+  L +++     +  L LS  +   
Sbjct: 721  VGLINIVQAMGGY--QNVQSLTLQFDQNMIEDNGLMSLSNLIQKYKSLISLTLSFENNKF 778

Query: 259  RDEGAKAIAELLKNNSILRVLELN--NNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYG 314
              +G K I++ LK    +  L+LN  N  ID  G   +++ +   +N T  SL+L  N  
Sbjct: 779  SLQGIKEISDSLKIFKHMNKLKLNLMNCKIDDDGIGLISKGIQAYDNITKFSLNLCHNSI 838

Query: 315  GALGANALAKGLEGNKSL--RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN--S 370
             + G   + K ++  K L   +L+L  N I + G +++  GL  +  KL  L +  N  +
Sbjct: 839  SSSGVKKIEKAIKNYKKLVKLDLNLKCNLINETGAQSIADGLH-KLTKLNYLKLKLNQCN 897

Query: 371  ISAKGAFHVAEYIKNCKSLLWINLYMND--IGDEGAEKIADALKQNRTIT--TIDLGGNN 426
            I  +GA H+A  I+N ++L+ + L++N   I  EGA  I  A+++ R +   ++DL   N
Sbjct: 898  IGKRGANHLANAIQNLQNLIELILHLNSSSIQVEGANNILKAIEKKRDLKFLSLDLSNEN 957

Query: 427  IHSKGASAIARVLKDNSVITS--LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ-- 482
                    ++  L+    I    +++  N I  +G K +S+VL+   ++ +L L   +  
Sbjct: 958  YDLDSIKDLSNTLEKQKKIDKFLIEVTDNIISYEGTKCISQVLQNFQSLTSLSLRLEKNF 1017

Query: 483  IGASGAEFVADMLRYNNTISILDLRAN---------GLRDEVCSGCNGLSFFHSAIYSLK 533
            I   G +++A  ++  N   I++   N         GL+  +     G     S      
Sbjct: 1018 ICDEGIKYIAQAIK--NFKHIIEFNLNAENNNINTVGLKS-IVHAMEGYQNVQSLTLQFD 1074

Query: 534  HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF--NEIRDDGAFAIAQALKANEDVA 591
            + L  +   N L     L Q +K    +L ++ L+F  N I+ DG     +++K  +++ 
Sbjct: 1075 NNLIKN---NGLMRLSNLIQKYK----SLINLSLSFENNHIKSDGVKFFVKSIKKCQNIQ 1127

Query: 592  VTSLNL 597
               LNL
Sbjct: 1128 RLELNL 1133



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 142/296 (47%), Gaps = 22/296 (7%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSL--L 390
           EL+L  + + + G++++   L   K  +++ +++ N  ++     ++A+ I N K+L  L
Sbjct: 290 ELNLQISKLRNIGLKSIADSLKHLKDVVSLNINLENIGVTNSNIKNIAQSISNMKNLKDL 349

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLG--GNNIHSKGASAIARVLKDNSVITSL 448
            +NL  + I D+G   IA  L +N  I  ++L    N   S+G   I+  LK    I+ L
Sbjct: 350 NLNLSQSQICDQGLTFIASGLSENELIEVLELNLQNNKFSSQGIKEISDSLKMFKHISEL 409

Query: 449 DLAYN--PIGADGAKALSEVLKFHGNIN--TLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            L+     I  D    +S+ ++ + NI   +L L   QI +SG + +   ++    + IL
Sbjct: 410 KLSLMNCKIDDDAIGFISKAIQTYENITKFSLNLYQNQITSSGVKEIEKAIKNYKKLVIL 469

Query: 505 DL--RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ----GAKCLAQSFKVV 558
           DL    N + DE      G       ++ L  +++  L +N  +    GA  LA + + +
Sbjct: 470 DLNLEYNSI-DET-----GAQSIADGLHKLTKLIYLKLKLNSCKIGKRGANHLANAIQNL 523

Query: 559 NEALTSI-DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              +  I  L+ + I+ +GA  I +A++    +   SLNL NN ++  G SA+ ++
Sbjct: 524 QNLIELILHLSSSSIQVEGANNILKAIEIKRGLKFLSLNLCNNNISSLGASAIANS 579


>gi|399498078|emb|CCG20367.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 132/269 (49%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +LQS   L+ L L  + I  E    +  ++     ++ L   +    
Sbjct: 224 NALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEKLKVLHFHNNMTG 283

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  G    
Sbjct: 284 DEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVG 343

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+ A  +
Sbjct: 344 LVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAI 403

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  +A+ +
Sbjct: 404 ASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTV 463

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLK 468
                   L++  N I  +G   L E+ K
Sbjct: 464 LHKDEFKLLNVNVNFISEEGVDELKEIFK 492



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 149/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLPDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           ++ + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  + ++N+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNV--NFISEEGVDELKE 489



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++     G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLPDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++  N I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNVNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLPDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+++++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|399497874|emb|CCG20265.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +   G   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSGGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSGGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|51850107|dbj|BAD42395.1| leucine-rich repeat protein [Ralstonia solanacearum]
          Length = 538

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 207/469 (44%), Gaps = 112/469 (23%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + ++G  F D+ L  L  SL     A ++S     ITAAGI        S + L  
Sbjct: 124 ALEKLTLAG-TFTDDDLRGLPASL----KALDLSRCRGPITAAGIAHL-----SRLPLVR 173

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+    IG EG +    +L ++  +  L +S+  +  EGA+A+A     N+ L  L ++
Sbjct: 174 LNVRNKRIGAEGAR----LLANHPTLTSLNVSNGRIGPEGAQALAA----NTRLTTLNVS 225

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK--------------GLEG 328
            N I  +G    A+AL  N T+RSL ++ N  G  GA  LA               G++G
Sbjct: 226 GNRIGVAG----AKALAANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDG 281

Query: 329 ------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                 +++L  L + GN IGD G+ AL +       +L  L++ +  + A G   +A  
Sbjct: 282 ATALAASRTLTSLAIGGNEIGDAGVLALAA-----NARLTTLNVESTGVGADGVKALAA- 335

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               K+L W+ L  NDIG+ GA     AL  + ++TT+ L  + I ++GA A+A     N
Sbjct: 336 ---SKTLTWLRLDGNDIGNAGAT----ALAASTSLTTLHLEHSRIGAEGAQALAA----N 384

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM-LRYNNTI 501
           + +T+LDL YN IG  G + LS             L W  +  +  E  + + L    T+
Sbjct: 385 TKLTTLDLGYNDIGDAGVRTLSA---------NATLVWLSVRRNNLEDASAVSLAAGKTL 435

Query: 502 SILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           + LD+  NG++D                                QGAK LA      N  
Sbjct: 436 TTLDISGNGIQD--------------------------------QGAKALA-----ANPT 458

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           LT++D++ N+I        A A     +  + SL+L NN + + G  AL
Sbjct: 459 LTTLDVSSNDI------RNAGARALAANARLVSLDLRNNRMEESGTRAL 501


>gi|327266796|ref|XP_003218190.1| PREDICTED: leucine-rich repeat-containing protein 34-like [Anolis
           carolinensis]
          Length = 455

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 133/255 (52%), Gaps = 13/255 (5%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N ++  GA HVA ++++  +LL++NL  NDIG  GAE IA AL +N T+  + + 
Sbjct: 119 LDLRYNLLTDAGAVHVAAFLQDNHTLLYLNLMFNDIGTIGAEFIAKALHRNETLLHLRMT 178

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ N+ I  LD A   +      AL+ VL  H +I  + L    +
Sbjct: 179 GNKIENKGGMYFAAMLQVNTTIQKLDFADCDLRTQSLIALATVLNQHESIRAINLNRPIL 238

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
            +   E    +A ML+ N+ +  L L  + +++       G+     A+Y    + +  L
Sbjct: 239 YSEEEEPTVHLALMLKVNSVLVELHLCKHEMKN------FGVERLCDALYENTTLRYLDL 292

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
             N +   G + L +  K +N  L  +DL FN I DDGAF +++AL +  +  + +L + 
Sbjct: 293 SCNKITRDGVQFLGRLLK-INSTLEILDLNFNRIEDDGAFYLSEALTS-YNRTLQALAVT 350

Query: 599 NNFLTKFGQSALTDA 613
           +N +T  G  AL+++
Sbjct: 351 HNNITGQGLVALSES 365



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 32/307 (10%)

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
           I +  AG  RL +    + D   + +A L  NN  L  L+L  N++  +G   +A  L +
Sbjct: 82  ITIKIAGNNRL-VPVQKVTDADFQILATLFTNNIFLTGLDLRYNLLTDAGAVHVAAFLQD 140

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG----IRALMSGLSS 356
           N T+  L+L  N  G +GA  +AK L  N++L  L + GN I ++G       L    + 
Sbjct: 141 NHTLLYLNLMFNDIGTIGAEFIAKALHRNETLLHLRMTGNKIENKGGMYFAAMLQVNTTI 200

Query: 357 RKGKLAVLDIGNNSISA--------------------------KGAFHVAEYIKNCKSLL 390
           +K   A  D+   S+ A                          +   H+A  +K    L+
Sbjct: 201 QKLDFADCDLRTQSLIALATVLNQHESIRAINLNRPILYSEEEEPTVHLALMLKVNSVLV 260

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  +++ + G E++ DAL +N T+  +DL  N I   G   + R+LK NS +  LDL
Sbjct: 261 ELHLCKHEMKNFGVERLCDALYENTTLRYLDLSCNKITRDGVQFLGRLLKINSTLEILDL 320

Query: 451 AYNPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            +N I  DGA  LSE L  ++  +  L +    I   G   +++ ++ N  +S + +  N
Sbjct: 321 NFNRIEDDGAFYLSEALTSYNRTLQALAVTHNNITGQGLVALSESMKINPVLSYIYIWGN 380

Query: 510 GLRDEVC 516
              ++ C
Sbjct: 381 KFDNDTC 387



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 137/308 (44%), Gaps = 8/308 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+      D G   +A  L  N T   ++   N I   G +     L  N  L  L
Sbjct: 116 LTGLDLRYNLLTDAGAVHVAAFLQDNHTLLYLNLMFNDIGTIGAEFIAKALHRNETLLHL 175

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            ++GN I ++G      +L  N  +++L  +  DLR +   A+A +L  +  +R + LN 
Sbjct: 176 RMTGNKIENKGGMYFAAMLQVNTTIQKLDFADCDLRTQSLIALATVLNQHESIRAINLNR 235

Query: 284 NMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            ++   +      LA  L  NS +  LHL  +     G   L   L  N +LR L L  N
Sbjct: 236 PILYSEEEEPTVHLALMLKVNSVLVELHLCKHEMKNFGVERLCDALYENTTLRYLDLSCN 295

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC-KSLLWINLYMNDI 399
            I  +G++  +  L      L +LD+  N I   GAF+++E + +  ++L  + +  N+I
Sbjct: 296 KITRDGVQ-FLGRLLKINSTLEILDLNFNRIEDDGAFYLSEALTSYNRTLQALAVTHNNI 354

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPIGAD 458
             +G   +++++K N  ++ I + GN   +    A A ++K   +  T  D+   P   D
Sbjct: 355 TGQGLVALSESMKINPVLSYIYIWGNKFDNDTCVAFADLIKSGRLAPTGTDV--EPYEVD 412

Query: 459 GAKALSEV 466
           G    +EV
Sbjct: 413 GTTYFAEV 420



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 5/273 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +T AG       LQ N  L  LNL  N IG  G + +   L  N  +  L+++   + 
Sbjct: 124 NLLTDAGAVHVAAFLQDNHTLLYLNLMFNDIGTIGAEFIAKALHRNETLLHLRMTGNKIE 183

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--YGGAL 317
           ++G    A +L+ N+ ++ L+  +  +      +LA  L ++ +IR+++LN    Y    
Sbjct: 184 NKGGMYFAAMLQVNTTIQKLDFADCDLRTQSLIALATVLNQHESIRAINLNRPILYSEEE 243

Query: 318 GANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                LA  L+ N  L ELHL  + + + G+  L   L      L  LD+  N I+  G 
Sbjct: 244 EPTVHLALMLKVNSVLVELHLCKHEMKNFGVERLCDALY-ENTTLRYLDLSCNKITRDGV 302

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAI 435
             +   +K   +L  ++L  N I D+GA  +++AL   NRT+  + +  NNI  +G  A+
Sbjct: 303 QFLGRLLKINSTLEILDLNFNRIEDDGAFYLSEALTSYNRTLQALAVTHNNITGQGLVAL 362

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +  +K N V++ + +  N    D   A ++++K
Sbjct: 363 SESMKINPVLSYIYIWGNKFDNDTCVAFADLIK 395



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGIT 203
           K+ R+  Q L    K       +D++     D+G F+L+E+L  YN+T + ++   N IT
Sbjct: 296 KITRDGVQFLGRLLKINSTLEILDLNFNRIEDDGAFYLSEALTSYNRTLQALAVTHNNIT 355

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
             G+ A    ++ N  L  + + GN   ++      D++
Sbjct: 356 GQGLVALSESMKINPVLSYIYIWGNKFDNDTCVAFADLI 394


>gi|326679422|ref|XP_001336197.4| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Danio
            rerio]
          Length = 1085

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 185/389 (47%), Gaps = 35/389 (8%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
            S + L+EF  ELR +        +F +E L  L   +  ++ AE    +   I   G  +
Sbjct: 646  STKDLDEF--ELRQY--------DFTEECLLRLLPVVKASRKAE---LSNCSIREEGCAS 692

Query: 210  FDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIA 267
                L SN + L+ LNL+ N  G   VK L D+L + +  +E+LQL +  + +EG  A+A
Sbjct: 693  LVSALLSNPSHLRELNLNSNQPGYSTVKLLSDLLENPHCKLEKLQLYNCCIGEEGCAALA 752

Query: 268  -ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKG 325
              L+ N S LR L LNNN    SG   L++ L +    +  L L        G  ALA  
Sbjct: 753  LALISNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLECCSIIEEGCAALALA 812

Query: 326  LEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYI 383
            L  N S LREL+L+ N  GD G+  L   L + + KL  L++ N  I  +G   +A   I
Sbjct: 813  LVSNPSHLRELNLNNNEPGDLGVNLLSFLLKNPQCKLEKLELYNCCIGEEGCAALALALI 872

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN 442
             N   L  +NL  N+ GD G + ++D LK  R  +  + L    I  +G +A+   LK N
Sbjct: 873  SNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLEYCCIGEEGCAALVSGLKSN 932

Query: 443  -SVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASG-AEFVADMLRYNN 499
             S +  L+L  N  G  GAK LS++LK     +  L+L  C I  +G A+ V+ +    +
Sbjct: 933  PSHLRELNLNRNEPGNLGAKMLSDLLKDPLFELEKLELDDCSIENNGFADLVSGLKSNPS 992

Query: 500  TISILDLRANG------------LRDEVC 516
             I  L+L +N             LRD+ C
Sbjct: 993  NIRELNLNSNKFIFSGLNLLCDLLRDQQC 1021



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 144/342 (42%), Gaps = 66/342 (19%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVER 250
            E++      I   G  A    L SN + L+ LNL+ N  GD GVK L D+L D    +E+
Sbjct: 734  EKLQLYNCCIGEEGCAALALALISNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEK 793

Query: 251  LQLSSVDLRDEGAKAIA-ELLKNNSILRVLELNNN------------------------- 284
            LQL    + +EG  A+A  L+ N S LR L LNNN                         
Sbjct: 794  LQLECCSIIEEGCAALALALVSNPSHLRELNLNNNEPGDLGVNLLSFLLKNPQCKLEKLE 853

Query: 285  ----MIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLH 338
                 I   G  +LA AL+ N S +R L+LN N  G  G   L+  L+  +  L +L L 
Sbjct: 854  LYNCCIGEEGCAALALALISNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLE 913

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-------------- 384
               IG+EG  AL+SGL S    L  L++  N     GA  +++ +K              
Sbjct: 914  YCCIGEEGCAALVSGLKSNPSHLRELNLNRNEPGNLGAKMLSDLLKDPLFELEKLELDDC 973

Query: 385  ----------------NCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNI 427
                            N  ++  +NL  N     G   + D L+ Q   +  + L   NI
Sbjct: 974  SIENNGFADLVSGLKSNPSNIRELNLNSNKFIFSGLNLLCDLLRDQQCKLRKLQLECCNI 1033

Query: 428  HSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLK 468
              +G +A+A  L  N S +  L+L YN  G  G K LS +LK
Sbjct: 1034 DEEGCAALALALISNPSHLRELNLNYNNPGGLGVKLLSVLLK 1075



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 125/293 (42%), Gaps = 38/293 (12%)

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
           +L     ++  +L   D  +E    +  ++K +   R  EL+N  I   G  SL  ALL 
Sbjct: 643 LLNSTKDLDEFELRQYDFTEECLLRLLPVVKAS---RKAELSNCSIREEGCASLVSALLS 699

Query: 301 N-STIRSLHLNGNYGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           N S +R L+LN N  G      L+  LE  +  L +L L+   IG+EG  AL   L S  
Sbjct: 700 NPSHLRELNLNSNQPGYSTVKLLSDLLENPHCKLEKLQLYNCCIGEEGCAALALALISNP 759

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKN--CK----------------------------S 388
             L  L++ NN     G   +++ +K+  CK                             
Sbjct: 760 SHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLECCSIIEEGCAALALALVSNPSH 819

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN-SVIT 446
           L  +NL  N+ GD G   ++  LK  +  +  ++L    I  +G +A+A  L  N S + 
Sbjct: 820 LRELNLNNNEPGDLGVNLLSFLLKNPQCKLEKLELYNCCIGEEGCAALALALISNPSHLR 879

Query: 447 SLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            L+L  N  G  G K LS++LK     +  L+L +C IG  G   +   L+ N
Sbjct: 880 ELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLEYCCIGEEGCAALVSGLKSN 932



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 107/250 (42%), Gaps = 37/250 (14%)

Query: 175  GDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGD 232
            GD G+  L+  L   Q   E++      I   G  A    L SN + L+ LNL+ N  GD
Sbjct: 831  GDLGVNLLSFLLKNPQCKLEKLELYNCCIGEEGCAALALALISNPSHLRELNLNNNEPGD 890

Query: 233  EGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNM----- 285
             GVK L D+L D    +E+LQL    + +EG  A+   LK+N S LR L LN N      
Sbjct: 891  SGVKLLSDLLKDPRCKLEKLQLEYCCIGEEGCAALVSGLKSNPSHLRELNLNRNEPGNLG 950

Query: 286  ------------------------IDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGAN 320
                                    I+ +GF  L   L  N S IR L+LN N     G N
Sbjct: 951  AKMLSDLLKDPLFELEKLELDDCSIENNGFADLVSGLKSNPSNIRELNLNSNKFIFSGLN 1010

Query: 321  ALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L   L   +  LR+L L   +I +EG  AL   L S    L  L++  N+    G   +
Sbjct: 1011 LLCDLLRDQQCKLRKLQLECCNIDEEGCAALALALISNPSHLRELNLNYNNPGGLGVKLL 1070

Query: 380  AEYIKN--CK 387
            +  +KN  CK
Sbjct: 1071 SVLLKNPHCK 1080



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 6/197 (3%)

Query: 175  GDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGD 232
            GD G+  L++ L   +   E++      I   G  A    L+SN + L+ LNL+ N  G+
Sbjct: 889  GDSGVKLLSDLLKDPRCKLEKLQLEYCCIGEEGCAALVSGLKSNPSHLRELNLNRNEPGN 948

Query: 233  EGVKCLCDILVDNA-GVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSG 290
             G K L D+L D    +E+L+L    + + G A  ++ L  N S +R L LN+N   +SG
Sbjct: 949  LGAKMLSDLLKDPLFELEKLELDDCSIENNGFADLVSGLKSNPSNIRELNLNSNKFIFSG 1008

Query: 291  FTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIR 348
               L + L +    +R L L        G  ALA  L  N S LREL+L+ N+ G  G++
Sbjct: 1009 LNLLCDLLRDQQCKLRKLQLECCNIDEEGCAALALALISNPSHLRELNLNYNNPGGLGVK 1068

Query: 349  ALMSGLSSRKGKLAVLD 365
             L   L +   KL  L+
Sbjct: 1069 LLSVLLKNPHCKLEKLE 1085


>gi|399498060|emb|CCG20358.1| Ran GTPase activating protein 2 [Solanum tuberosum]
 gi|399498088|emb|CCG20372.1| Ran GTPase activating protein 2 [Solanum tuberosum]
 gi|399498108|emb|CCG20382.1| Ran GTPase activating protein 2 [Solanum vernei]
 gi|399498118|emb|CCG20387.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|399497984|emb|CCG20320.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGADAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 46.2 bits (108), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEG  AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|348517451|ref|XP_003446247.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Oreochromis niloticus]
          Length = 941

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 4/250 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+  +L++   L  L+++NN I   G   L  +  + + +R   L  N+        LA+
Sbjct: 682 ALNFVLQHRQKLLGLDMDNNNISDYGVKQLKPSFCKMTVVR---LCVNHLSDRSIEILAE 738

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  +K +  L L+ N+I D G R L++ +     KL VL IG N I++ G  H+A  IK
Sbjct: 739 ELCKHKVVEVLGLYNNNITDAGAR-LVAQIIEECPKLRVLKIGKNKITSVGGRHLANAIK 797

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
              S+  + ++ N IGDEGAE   +AL+ + ++T + L  N I S+G   +A  LK+N+ 
Sbjct: 798 KSSSIFDVGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGLAEALKENTA 857

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +    L  N +  D A  L+++++ +  +  L L   Q    G   +A+ L +N  +  +
Sbjct: 858 LRIFWLVENEMTDDAAPHLADMIQANTGLTHLWLISNQFTVEGIRQLAEALTHNKGLKEI 917

Query: 505 DLRANGLRDE 514
            ++ N L +E
Sbjct: 918 CVKGNRLSEE 927



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 26/291 (8%)

Query: 198 AANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEGVKCL----CDI 241
            A GITA  IK            A + VLQ    L  L++  N I D GVK L    C +
Sbjct: 659 TAKGITAGFIKLGYCNVYSGDCTALNFVLQHRQKLLGLDMDNNNISDYGVKQLKPSFCKM 718

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            V       ++L    L D   + +AE L  + ++ VL L NN I  +G   +A+ + E 
Sbjct: 719 TV-------VRLCVNHLSDRSIEILAEELCKHKVVEVLGLYNNNITDAGARLVAQIIEEC 771

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +R L +  N   ++G   LA  ++ + S+ ++ + GNSIGDEG  A    L +    L
Sbjct: 772 PKLRVLKIGKNKITSVGGRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPS-L 830

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +  N I+++G   +AE +K   +L    L  N++ D+ A  +AD ++ N  +T + 
Sbjct: 831 TNLSLSANCITSRGGRGLAEALKENTALRIFWLVENEMTDDAAPHLADMIQANTGLTHLW 890

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL--SEVLKFH 470
           L  N    +G   +A  L  N  +  + +  N +  +  +     + L+FH
Sbjct: 891 LISNQFTVEGIRQLAEALTHNKGLKEICVKGNRLSEEEEQQFVSEKRLRFH 941



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           KQ    F K     + V +   +  D  +  LAE L  ++  E +    N IT AG +  
Sbjct: 709 KQLKPSFCK----MTVVRLCVNHLSDRSIEILAEELCKHKVVEVLGLYNNNITDAGARLV 764

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++    L+ L +  N I   G + L + +  ++ +  + +    + DEGA+A  E L
Sbjct: 765 AQIIEECPKLRVLKIGKNKITSVGGRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGEAL 824

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +N+  L  L L+ N I   G   LAEAL EN+ +R   L  N      A  LA  ++ N 
Sbjct: 825 RNHPSLTNLSLSANCITSRGGRGLAEALKENTALRIFWLVENEMTDDAAPHLADMIQANT 884

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L  L L  N    EGIR L   L+  KG   +   GN
Sbjct: 885 GLTHLWLISNQFTVEGIRQLAEALTHNKGLKEICVKGN 922



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 3/206 (1%)

Query: 150 SKQTLNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           S +++   A+EL     V++ G    N  D G   +A+ +        +    N IT+ G
Sbjct: 729 SDRSIEILAEELCKHKVVEVLGLYNNNITDAGARLVAQIIEECPKLRVLKIGKNKITSVG 788

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +     ++ + ++  + + GN IGDEG +   + L ++  +  L LS+  +   G + +
Sbjct: 789 GRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGL 848

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE LK N+ LR+  L  N +       LA+ +  N+ +  L L  N     G   LA+ L
Sbjct: 849 AEALKENTALRIFWLVENEMTDDAAPHLADMIQANTGLTHLWLISNQFTVEGIRQLAEAL 908

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMS 352
             NK L+E+ + GN + +E  +  +S
Sbjct: 909 THNKGLKEICVKGNRLSEEEEQQFVS 934



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 38/258 (14%)

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
             + KL  LD+ NN+IS  G   +      CK  + + L +N + D   E +A+ L +++
Sbjct: 688 QHRQKLLGLDMDNNNISDYGVKQLKPSF--CKMTV-VRLCVNHLSDRSIEILAEELCKHK 744

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
            +  + L  NNI   GA  +A+++++   +  L +  N I + G + L+  +K   +I  
Sbjct: 745 VVEVLGLYNNNITDAGARLVAQIIEECPKLRVLKIGKNKITSVGGRHLANAIKKSSSIFD 804

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHM 535
           + +    IG  GAE   + LR + +++ L L AN                          
Sbjct: 805 VGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSAN-------------------------- 838

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
                CI   +G + LA++ K  N AL    L  NE+ DD A  +A  ++AN    +T L
Sbjct: 839 -----CITS-RGGRGLAEALKE-NTALRIFWLVENEMTDDAAPHLADMIQAN--TGLTHL 889

Query: 596 NLANNFLTKFGQSALTDA 613
            L +N  T  G   L +A
Sbjct: 890 WLISNQFTVEGIRQLAEA 907


>gi|403347321|gb|EJY73081.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 825

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 163/339 (48%), Gaps = 10/339 (2%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L++ +  NQ    +    N +   G+K     +  +  +  L+LS N I  +G K +   
Sbjct: 240 LSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHKGAKKIFTS 299

Query: 242 LVDNAGVERLQLSSVD------LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           L+ N  +  L+L S+D      +  +G + +  LL+++  L+ L+L +N++  +G  +L 
Sbjct: 300 LLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILSDNGIVTLC 359

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           +AL +N T+ SL+L  N   + G   L   L     L EL L GN +G++GI  L   +S
Sbjct: 360 DALFQNKTLVSLNLGSNEITSYGMERLKDALLTT-VLNELDLTGNPLGNQGIDYLGQYMS 418

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                L  L+I      + G+  + + ++ C SL  + L  ND+    +  +   +    
Sbjct: 419 HADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLKSRNSSYLTTGIYHG- 477

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNIN 474
            +T + +   N+      ++A  L  +  + +L L YN +  + AK L+E L K   NI 
Sbjct: 478 -LTYLSMIRCNLGDDEGISVAEGLSRSRQLKALILQYNSLSDEAAKTLAEALAKPTVNIE 536

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            L L   +I  +G E +A  L  N+++S L+L++N L++
Sbjct: 537 HLDLSHNKINDAGGELIAISLGQNSSLSKLNLKSNNLKE 575



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 31/329 (9%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           T L++ +  N  I  + L  N  G  G   L K +  +K++  L L  N I  +G + + 
Sbjct: 238 TELSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHKGAKKIF 297

Query: 352 SGL----SSRKGKLAVLD-IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           + L    S    KL  +D +  N +  KG  H+   +++ K L +++L  N + D G   
Sbjct: 298 TSLLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILSDNGIVT 357

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + DAL QN+T+ +++LG N I S G   +   L   +V+  LDL  NP+G  G   L + 
Sbjct: 358 LCDALFQNKTLVSLNLGSNEITSYGMERLKDALL-TTVLNELDLTGNPLGNQGIDYLGQY 416

Query: 467 LKFHGNINTLKL--GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           +  H + N ++L    C+  + G+  +   +R  +++  L L  N L+          S+
Sbjct: 417 MS-HADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLK------SRNSSY 469

Query: 525 FHSAIYSLKHMLFYSLCINYLQG-------AKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
             + IY   H L Y   I    G       A+ L++S       L ++ L +N + D+ A
Sbjct: 470 LTTGIY---HGLTYLSMIRCNLGDDEGISVAEGLSRS-----RQLKALILQYNSLSDEAA 521

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFG 606
             +A+AL A   V +  L+L++N +   G
Sbjct: 522 KTLAEAL-AKPTVNIEHLDLSHNKINDAG 549



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 150/334 (44%), Gaps = 36/334 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+      D G+  L ++L  N+T   ++  +N IT+ G++     L + + L  L+L+
Sbjct: 343 LDLRSNILSDNGIVTLCDALFQNKTLVSLNLGSNEITSYGMERLKDALLTTV-LNELDLT 401

Query: 227 GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           GNP+G++G+  L   +   +  + RL +S    +  G+  + + ++  S L+ L L+ N 
Sbjct: 402 GNPLGNQGIDYLGQYMSHADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKND 461

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +     + L   +    T  S+ +  N G   G  ++A+GL  ++ L+ L L  NS+ DE
Sbjct: 462 LKSRNSSYLTTGIYHGLTYLSM-IRCNLGDDEGI-SVAEGLSRSRQLKALILQYNSLSDE 519

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
             + L   L+     +  LD+ +N I+                            D G E
Sbjct: 520 AAKTLAEALAKPTVNIEHLDLSHNKIN----------------------------DAGGE 551

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA +L QN +++ ++L  NN+     S  A+ +K NS I  LDL+ N +  +  + + +
Sbjct: 552 LIAISLGQNSSLSKLNLKSNNLKETTGSLFAKSVKQNSQIQFLDLSKNSVPVNFIEDIEQ 611

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            L+    +N ++    +I     E V   L   N
Sbjct: 612 QLQ----VNLIRAAKNKIPQYKTEVVQLKLEQEN 641


>gi|399498032|emb|CCG20344.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 45.8 bits (107), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEG  AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399498110|emb|CCG20383.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 19/252 (7%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
                KH     + ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  
Sbjct: 352 -----KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASC 406

Query: 584 LKANEDVAVTSL 595
           + A + +A  SL
Sbjct: 407 IAAKQLLAKLSL 418


>gi|399498040|emb|CCG20348.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L    + DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLDLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLDLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLDLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS +DL DEG  AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLDLEDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|326431953|gb|EGD77523.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818]
          Length = 1076

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 132/266 (49%), Gaps = 5/266 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+++AF    +   + G EG   LA +L  +   + +    N I   G  A  G L+ + 
Sbjct: 58  KDIQAF----LDNNSIGKEGCVALAGALRGHTGLQRLVLNNNSIEKEGCVALAGALRGHT 113

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L+ L L+ N I  EG   L   L  + G++ L L++  +  EG  A+A  L+ ++ L+ 
Sbjct: 114 GLQWLGLTNNSIEKEGCVALAGALRGHTGLQELYLNNNSIEKEGCVALAGALRGHTGLQE 173

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L+NN I+  G  +LA AL  ++ ++ L L+ N     G  ALA  L G+  L+EL L+
Sbjct: 174 LYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCVALAGALRGHTGLQELFLN 233

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NSI  EG  AL   L    G L  L + +NSI  +G   +A  ++    L  + L  N 
Sbjct: 234 NNSIEKEGCVALAGALRGHTG-LQELYLDDNSIEKEGCVALAGALRGHTGLYILGLSNNS 292

Query: 399 IGDEGAEKIADALKQNRTITTIDLGG 424
           I  EG   +A AL+++  + T+ L G
Sbjct: 293 IEKEGCVALAGALREHTRLQTLWLQG 318



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 4/295 (1%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDIL--VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           ++   +N +   +GD+G K L   L    N  ++   L +  +  EG  A+A  L+ ++ 
Sbjct: 28  MSTTNVNFNKAGLGDKGAKALAIALNIRPNKDIQAF-LDNNSIGKEGCVALAGALRGHTG 86

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ L LNNN I+  G  +LA AL  ++ ++ L L  N     G  ALA  L G+  L+EL
Sbjct: 87  LQRLVLNNNSIEKEGCVALAGALRGHTGLQWLGLTNNSIEKEGCVALAGALRGHTGLQEL 146

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L+ NSI  EG  AL   L    G L  L + NNSI  +G   +A  ++    L  + L 
Sbjct: 147 YLNNNSIEKEGCVALAGALRGHTG-LQELYLSNNSIEKEGCVALAGALRGHTGLQELFLS 205

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N I  EG   +A AL+ +  +  + L  N+I  +G  A+A  L+ ++ +  L L  N I
Sbjct: 206 NNSIEKEGCVALAGALRGHTGLQELFLNNNSIEKEGCVALAGALRGHTGLQELYLDDNSI 265

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             +G  AL+  L+ H  +  L L    I   G   +A  LR +  +  L L+  G
Sbjct: 266 EKEGCVALAGALRGHTGLYILGLSNNSIEKEGCVALAGALREHTRLQTLWLQGIG 320



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 131/277 (47%), Gaps = 4/277 (1%)

Query: 258 LRDEGAKAIAELL--KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
           L D+GAKA+A  L  + N  ++   L+NN I   G  +LA AL  ++ ++ L LN N   
Sbjct: 40  LGDKGAKALAIALNIRPNKDIQAF-LDNNSIGKEGCVALAGALRGHTGLQRLVLNNNSIE 98

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G  ALA  L G+  L+ L L  NSI  EG  AL   L    G L  L + NNSI  +G
Sbjct: 99  KEGCVALAGALRGHTGLQWLGLTNNSIEKEGCVALAGALRGHTG-LQELYLNNNSIEKEG 157

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
              +A  ++    L  + L  N I  EG   +A AL+ +  +  + L  N+I  +G  A+
Sbjct: 158 CVALAGALRGHTGLQELYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCVAL 217

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A  L+ ++ +  L L  N I  +G  AL+  L+ H  +  L L    I   G   +A  L
Sbjct: 218 AGALRGHTGLQELFLNNNSIEKEGCVALAGALRGHTGLQELYLDDNSIEKEGCVALAGAL 277

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           R +  + IL L  N +  E C    G    H+ + +L
Sbjct: 278 RGHTGLYILGLSNNSIEKEGCVALAGALREHTRLQTL 314



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 9/273 (3%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +GD+G +AL   L+ R  K     + NNSI  +G   +A  ++    L  + L  N I  
Sbjct: 40  LGDKGAKALAIALNIRPNKDIQAFLDNNSIGKEGCVALAGALRGHTGLQRLVLNNNSIEK 99

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EG   +A AL+ +  +  + L  N+I  +G  A+A  L+ ++ +  L L  N I  +G  
Sbjct: 100 EGCVALAGALRGHTGLQWLGLTNNSIEKEGCVALAGALRGHTGLQELYLNNNSIEKEGCV 159

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
           AL+  L+ H  +  L L    I   G   +A  LR +  +  L L  N +  E C    G
Sbjct: 160 ALAGALRGHTGLQELYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCVALAG 219

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRDDGAFAI 580
               H+ +  L       L  N ++   C+A +  +  +  L  + L  N I  +G  A+
Sbjct: 220 ALRGHTGLQEL------FLNNNSIEKEGCVALAGALRGHTGLQELYLDDNSIEKEGCVAL 273

Query: 581 AQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           A AL+ +  + +  L L+NN + K G  AL  A
Sbjct: 274 AGALRGHTGLYI--LGLSNNSIEKEGCVALAGA 304


>gi|354479045|ref|XP_003501724.1| PREDICTED: T-complex-associated testis-expressed protein 1
           [Cricetulus griseus]
 gi|344245236|gb|EGW01340.1| T-complex-associated testis-expressed protein 1 [Cricetulus
           griseus]
          Length = 498

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 102/186 (54%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  +    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 254 EWNLFLFTFRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSH 313

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 314 NLIGDRGARAAAKLLS--HSRLRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNCI 371

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + IA AL+ N+ +TT+ LGGN +    A+ +++VL  N+++TSL+L+ N IG DG
Sbjct: 372 EDEGGQAIAHALETNKCLTTLHLGGNELSEPTATVLSQVLPINTILTSLNLSCNHIGVDG 431

Query: 460 AKALSE 465
            K L E
Sbjct: 432 GKQLLE 437



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 269 AATIKACH-------TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 321

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  A+A
Sbjct: 322 RAAAKLL-SHSRLRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIA 380

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             LE NK L  LHL GN +  E    ++S +      L  L++  N I   G   + E +
Sbjct: 381 HALETNKCLTTLHLGGNELS-EPTATVLSQVLPINTILTSLNLSCNHIGVDGGKQLLEGM 439

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
              K++L  +L ++D+  E    I  AL  NR
Sbjct: 440 SENKTILEFDLRLSDVSQESEYLIGQALHANR 471



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA  
Sbjct: 265 CHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPA-LEELDLSHNLIGDRGARA 323

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  AIA  
Sbjct: 324 AAKLLSHSR-LRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIAHA 382

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + +L L    IG  G + + + +  N
Sbjct: 383 LETNKCLTTLHLGGNELSEPTATVLSQVLPINTILTSLNLSCNHIGVDGGKQLLEGMSEN 442

Query: 499 NTISILDLRANGLRDE 514
            TI   DLR + +  E
Sbjct: 443 KTILEFDLRLSDVSQE 458



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 253 FEWNLFLFTFRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 312

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 313 HNLIGDRGARAAAKLL-SHSRLRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNCI 371

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +AIA  L+ N  L  L L  N +     T L++ L  N+ + SL+L+ N+ G  G
Sbjct: 372 EDEGGQAIAHALETNKCLTTLHLGGNELSEPTATVLSQVLPINTILTSLNLSCNHIGVDG 431

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK++ E  L  + +  E
Sbjct: 432 GKQLLEGMSENKTILEFDLRLSDVSQE 458



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 10/229 (4%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  IK C +L    L  + + D+ A  +  +L  +  +  +DL  N I  +GA A A++
Sbjct: 268 LAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKL 327

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A  L  N
Sbjct: 328 LS-HSRLRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIAHALETN 386

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
             ++ L L  N L +   +  + +   ++ + SL      +L  N++   G K L +   
Sbjct: 387 KCLTTLHLGGNELSEPTATVLSQVLPINTILTSL------NLSCNHIGVDGGKQLLEGMS 440

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
             N+ +   DL  +++  +  + I QAL AN + A        +F+T  
Sbjct: 441 E-NKTILEFDLRLSDVSQESEYLIGQALHANREAARQRALNPGHFMTPI 488


>gi|440804489|gb|ELR25366.1| FERM central domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 1072

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 153/342 (44%), Gaps = 31/342 (9%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           ++S   N ITA   +    +L +   L+ LNL+   +G +G   L  +L  N  +  L +
Sbjct: 649 DLSSNQNAITARHAQYIGQLLGACPVLRVLNLNDCRLGTQGAVDLAAVLTSNLTLHELHV 708

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +S  + D G  A+ + LK N  L      +N +   G   L + L +N  + +L L  N 
Sbjct: 709 ASNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAKLLGDMLEKNPHVTTLALGLNK 768

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G LG N L  G++ N +L  L L       +  + L+  L+  K  +  + + +N I  
Sbjct: 769 FGDLGINHLYHGIKCNTTLLRLDLCRTEFTAKAGKHLLRILTE-KPNITCVKLAHNDIGQ 827

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            G   +  Y+ +   L  ++L   +IG +  + I   L++NR++TT+ L GN    KGA 
Sbjct: 828 TGGQMLGAYLTSGSRLTVLDLSYTNIGSKALKAIGRGLRENRSVTTLKLSGNEFDKKGAM 887

Query: 434 ---------------AIAR--------------VLKDNSVITSLDLAYNPIGADGAKALS 464
                          A+AR              +   N+ +  L+L++NP+  + AK + 
Sbjct: 888 ALAEALEANRTLQHLALARCGLPKPALWVLVQALRSRNTTLQRLNLSHNPMNVEVAKVMG 947

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +VL ++ ++ TL L  C + + G + +   +  N  +  L+L
Sbjct: 948 DVLAYNTSLQTLNLTGC-LSSDGTKEIVTGIGVNRALVKLNL 988



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 29/313 (9%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
               + ++     D G   L ++L  NQ     +FA NG++A G K    +L+ N  + TL
Sbjct: 703  LHELHVASNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAKLLGDMLEKNPHVTTL 762

Query: 224  NLSGNPIGD-------EGVKC--------LCD-------------ILVDNAGVERLQLSS 255
             L  N  GD        G+KC        LC              IL +   +  ++L+ 
Sbjct: 763  ALGLNKFGDLGINHLYHGIKCNTTLLRLDLCRTEFTAKAGKHLLRILTEKPNITCVKLAH 822

Query: 256  VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             D+   G + +   L + S L VL+L+   I      ++   L EN ++ +L L+GN   
Sbjct: 823  NDIGQTGGQMLGAYLTSGSRLTVLDLSYTNIGSKALKAIGRGLRENRSVTTLKLSGNEFD 882

Query: 316  ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
              GA ALA+ LE N++L+ L L    +    +  L+  L SR   L  L++ +N ++ + 
Sbjct: 883  KKGAMALAEALEANRTLQHLALARCGLPKPALWVLVQALRSRNTTLQRLNLSHNPMNVEV 942

Query: 376  AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            A  + + +    SL  +NL    +  +G ++I   +  NR +  ++L G  +     +++
Sbjct: 943  AKVMGDVLAYNTSLQTLNL-TGCLSSDGTKEIVTGIGVNRALVKLNLSGCRMTKVVWTSL 1001

Query: 436  ARVLKDNSVITSL 448
            A  +  N  +  L
Sbjct: 1002 ADAILQNRTLERL 1014



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 129/277 (46%), Gaps = 20/277 (7%)

Query: 342 IGDEGIRALMSGLSSRKGK---------LAVLDIGNN--SISAKGAFHVAEYIKNCKSLL 390
           +G+   +AL+ GL +   +         +  LD+ +N  +I+A+ A ++ + +  C  L 
Sbjct: 617 VGEFQFKALLKGLEAAAAQAVHAHNNILIQELDLSSNQNAITARHAQYIGQLLGACPVLR 676

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL    +G +GA  +A  L  N T+  + +  N I+ +G +A+ + LK N  + + + 
Sbjct: 677 VLNLNDCRLGTQGAVDLAAVLTSNLTLHELHVASNQINDRGTAALVKALKGNQALHAFNF 736

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           A N + ADGAK L ++L+ + ++ TL LG  + G  G   +   ++ N T+  LDL    
Sbjct: 737 ADNGLSADGAKLLGDMLEKNPHVTTLALGLNKFGDLGINHLYHGIKCNTTLLRLDL---- 792

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEALTSIDLAF 569
            R E  +           +    ++    L  N + Q    +  ++      LT +DL++
Sbjct: 793 CRTEFTAKAG--KHLLRILTEKPNITCVKLAHNDIGQTGGQMLGAYLTSGSRLTVLDLSY 850

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
             I      AI + L+ N   +VT+L L+ N   K G
Sbjct: 851 TNIGSKALKAIGRGLRENR--SVTTLKLSGNEFDKKG 885



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-N 217
            +E R+ +++ +SG  F  +G   LAE+L  N+T + ++ A  G+    +      L+S N
Sbjct: 866  RENRSVTTLKLSGNEFDKKGAMALAEALEANRTLQHLALARCGLPKPALWVLVQALRSRN 925

Query: 218  IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L+ LNLS NP+  E  K + D+L  N  ++ L L+   L  +G K I   +  N  L 
Sbjct: 926  TTLQRLNLSHNPMNVEVAKVMGDVLAYNTSLQTLNLTGC-LSSDGTKEIVTGIGVNRALV 984

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSL 307
             L L+   +    +TSLA+A+L+N T+  L
Sbjct: 985  KLNLSGCRMTKVVWTSLADAILQNRTLERL 1014


>gi|426234291|ref|XP_004011130.1| PREDICTED: uncharacterized protein C14orf166B homolog [Ovis aries]
          Length = 492

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 124/273 (45%), Gaps = 30/273 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN  + TL L+ N I  EG+  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S  DL  EGA+ ++E L+NN S L  L+L  N           +AL  N  I+SL
Sbjct: 147 QEMNVSDNDLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N         L + L  N  L+ L L  N +   G+ AL +GL S           
Sbjct: 207 DLSHNQFCHKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSN---------- 256

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
                               SL  ++L MN  G+EGA  + + L+ N  +T +DL  NNI
Sbjct: 257 -------------------VSLKKLDLSMNSFGNEGAAALGEVLRLNSYLTYLDLSSNNI 297

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            + G S I+R L+ N  +  L L  NPI  DGA
Sbjct: 298 TNDGLSKISRALELNESLKVLKLFLNPISMDGA 330



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 150/299 (50%), Gaps = 5/299 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G +G   +A +L  N T   +  A N I   GI +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + L + L +N + +  LQL+  + ++E A+   + L NN  ++ L+L++
Sbjct: 151 VSDNDLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N   +     L + L  N  ++SL L+ N+    G  AL  GL  N SL++L L  NS G
Sbjct: 211 NQFCHKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+ +N+I+  G   ++  ++  +SL  + L++N I  +G
Sbjct: 271 NEGAAALGEVL-RLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDG 329

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPIGADGAK 461
           A  +  ++K+N      D+  +N+    +    ++L     I   LD+ Y  + A  AK
Sbjct: 330 ALLLILSIKRNPKSRMEDIDISNVLV--SEQFVKILDGVCAIHPQLDVIYKSVQALSAK 386



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 41/320 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I  EGI +L+  L      L  +++
Sbjct: 93  VNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILSLVEMLQENY-YLQEMNV 151

Query: 367 GNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E+++N   SLL + L  N+  +E AE    AL  N  I ++DL  N
Sbjct: 152 SDNDLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               K    + ++L  N  + SLDL++N +   G  AL   L+ + ++  L L     G 
Sbjct: 212 QFCHKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N+ ++ LDL +N + ++      GLS    A+                
Sbjct: 272 EGAAALGEVLRLNSYLTYLDLSSNNITND------GLSKISRALE--------------- 310

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANN 600
                       +NE+L  + L  N I  DGA  +  ++K N     ED+ ++++ ++  
Sbjct: 311 ------------LNESLKVLKLFLNPISMDGALLLILSIKRNPKSRMEDIDISNVLVSEQ 358

Query: 601 FLTKF-GQSALTDAKDLVYE 619
           F+    G  A+    D++Y+
Sbjct: 359 FVKILDGVCAIHPQLDVIYK 378



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 111/231 (48%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           LN++ +   G  ++A AL+ N+T+ +L L  N     G  +L + L+ N  L+E+++  N
Sbjct: 95  LNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILSLVEMLQENYYLQEMNVSDN 154

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +G EG R L   L +    L  L +  N+   + A    + + N   +  ++L  N   
Sbjct: 155 DLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSHNQFC 214

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            +  E +   L  N  + ++DL  N+++ +G  A+   L+ N  +  LDL+ N  G +GA
Sbjct: 215 HKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGA 274

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            AL EVL+ +  +  L L    I   G   ++  L  N ++ +L L  N +
Sbjct: 275 AALGEVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPI 325



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 41/255 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G +G + IA AL  N T+ T++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YVNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEV----------LKFHGN------------ 472
           +  +L++N  +  ++++ N +G +GA+ LSE           L+  GN            
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQ 195

Query: 473 -------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSF 524
                  I +L L   Q      E++  ML  N  +  LDL  N L    V + CNGL  
Sbjct: 196 ALSNNYRIKSLDLSHNQFCHKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGL-- 253

Query: 525 FHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
              +  SLK +    L +N    +GA  L +  + +N  LT +DL+ N I +DG   I++
Sbjct: 254 --RSNVSLKKL---DLSMNSFGNEGAAALGEVLR-LNSYLTYLDLSSNNITNDGLSKISR 307

Query: 583 ALKANEDVAVTSLNL 597
           AL+ NE + V  L L
Sbjct: 308 ALELNESLKVLKLFL 322



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 2/228 (0%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + L+EF +    +  S+ ++G NF +E      ++L  N   + +  + N       
Sbjct: 159 EGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSHNQFCHKAG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L++L+LS N +   GV  LC+ L  N  +++L LS     +EGA A+ 
Sbjct: 219 EYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+L+ NS L  L+L++N I   G + ++ AL  N +++ L L  N     GA  L   ++
Sbjct: 279 EVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGALLLILSIK 338

Query: 328 GNKSLRELHLH-GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            N   R   +   N +  E    ++ G+ +   +L V+     ++SAK
Sbjct: 339 RNPKSRMEDIDISNVLVSEQFVKILDGVCAIHPQLDVIYKSVQALSAK 386


>gi|344925101|ref|ZP_08778562.1| hypothetical protein COdytL_10705 [Candidatus Odyssella
           thessalonicensis L13]
          Length = 301

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 2/245 (0%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           ++L  N T + +  A   + + G+      L+S  +L++L+LS NP+  E +K L   + 
Sbjct: 2   QALKSNMTLQRLKLAKLDLDSKGLATIIYSLESYPSLRSLDLSDNPLSLESIKGLAAYIK 61

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
            N  ++ L+L+SV L  EG K + E LK    LR L L  N +   G     E+   ++ 
Sbjct: 62  SNKNLKTLKLNSVSLTPEGLKILLEALKETQSLRHLSLKCNTLGPEGIKVFGESFTGSTF 121

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +  L+L  N  G  G     +   G   L+ L L  N IG EGI++L + L      L  
Sbjct: 122 LERLNLASNNIGPEGIKVFVESFTGITFLKHLSLASNKIGPEGIKSL-ADLLMNNPSLTR 180

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE-KIADALKQNRTITTIDL 422
           LD+  N +  KG   +A  +K    L ++NL  N+I DEG +  I   L  N T+T +DL
Sbjct: 181 LDVSMNKLQYKGMPSLATALKVNTKLQYLNLATNNIYDEGVKILIQQGLTDNFTLTYLDL 240

Query: 423 GGNNI 427
             N++
Sbjct: 241 SSNDL 245



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 17/275 (6%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  S+D+S      E +  LA  +  N+  + +   +  +T  G+K     L+   +L+ 
Sbjct: 37  SLRSLDLSDNPLSLESIKGLAAYIKSNKNLKTLKLNSVSLTPEGLKILLEALKETQSLRH 96

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N +G EG+K   +    +  +ERL L+S ++  EG K   E     + L+ L L 
Sbjct: 97  LSLKCNTLGPEGIKVFGESFTGSTFLERLNLASNNIGPEGIKVFVESFTGITFLKHLSLA 156

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G  SLA+ L+ N ++  L ++ N     G  +LA  L+ N  L+ L+L  N+I
Sbjct: 157 SNKIGPEGIKSLADLLMNNPSLTRLDVSMNKLQYKGMPSLATALKVNTKLQYLNLATNNI 216

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            DEG++ L+    +    L  LD+ +N ++  G ++  +YI    +L             
Sbjct: 217 YDEGVKILIQQGLTDNFTLTYLDLSSNDLA--GVYY-GDYIYGENTL------------- 260

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
              K+ + L++N TI  + L  N++  +    + R
Sbjct: 261 -NVKLLNLLQENPTIKQLILKNNSLTKRNKELVKR 294



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 18/292 (6%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L+ N +L+ L L    +  +G+  ++  L S    L  LD+ +N +S +    +A YI
Sbjct: 2   QALKSNMTLQRLKLAKLDLDSKGLATIIYSLESYPS-LRSLDLSDNPLSLESIKGLAAYI 60

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+ K+L  + L    +  EG + + +ALK+ +++  + L  N +  +G          ++
Sbjct: 61  KSNKNLKTLKLNSVSLTPEGLKILLEALKETQSLRHLSLKCNTLGPEGIKVFGESFTGST 120

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +  L+LA N IG +G K   E       +  L L   +IG  G + +AD+L  N +++ 
Sbjct: 121 FLERLNLASNNIGPEGIKVFVESFTGITFLKHLSLASNKIGPEGIKSLADLLMNNPSLTR 180

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN--YLQGAKCLAQSFKVVNEA 561
           LD+  N L+        G+    +A+     + + +L  N  Y +G K L Q     N  
Sbjct: 181 LDVSMNKLQ------YKGMPSLATALKVNTKLQYLNLATNNIYDEGVKILIQQGLTDNFT 234

Query: 562 LTSIDLAFNE---------IRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           LT +DL+ N+         I  +    +       E+  +  L L NN LTK
Sbjct: 235 LTYLDLSSNDLAGVYYGDYIYGENTLNVKLLNLLQENPTIKQLILKNNSLTK 286


>gi|290972120|ref|XP_002668808.1| predicted protein [Naegleria gruberi]
 gi|284082332|gb|EFC36064.1| predicted protein [Naegleria gruberi]
          Length = 329

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 200/396 (50%), Gaps = 90/396 (22%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNS 274
           L +L++  N IG EG K +          E  QL+S+D+       EGAK I+E+     
Sbjct: 4   LTSLDMHSNEIGVEGSKYIS---------EMKQLTSLDIYSNEIGVEGAKYISEMKS--- 51

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L++++N I   G   ++E       + SL++        G N +  G+EG+K + E
Sbjct: 52  -LTSLDIHSNEIGVEGSKYISEM----KQLTSLNI--------GYNQI--GVEGSKYISE 96

Query: 335 ------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
                 L +H N IG EG + +     S   +L  L+IG N IS +GA    +YI   KS
Sbjct: 97  MNQLTSLDIHSNEIGVEGSKYI-----SEMKQLTSLNIGYNQISVEGA----KYISGMKS 147

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  + +  N IG EG++ I++ +KQ   +T++++G N I  +GA  I+ +      +TSL
Sbjct: 148 LTSLYIGYNQIGVEGSKYISE-MKQ---LTSLNIGHNEIGEEGAKYISGM----KSLTSL 199

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           ++ YN IG +G+K +SE+ +      +L +G  +I   G+++++ M     +++ L++  
Sbjct: 200 NIGYNQIGVEGSKYISEMKQL----TSLNIGHNEISVEGSKYISGM----KSLTSLNIGY 251

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY----LQGAKCLAQSFKVVNEALTS 564
           N +      G  G  +    I  +K +   SL I Y    ++GAK ++       ++LTS
Sbjct: 252 NQI------GVEGSKY----ISEMKQLT--SLNIGYNEIGVEGAKYISGM-----KSLTS 294

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           +++ +N+I  +G+  I++  +      +TSLN+ +N
Sbjct: 295 LNIGYNQIGVEGSKYISEMKQ------LTSLNIGHN 324



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 49/267 (18%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAE-------SLGYNQTAEE-------------V 195
           ++  E+   +S+D+     G EG  +++E       ++GYNQ + E             +
Sbjct: 92  KYISEMNQLTSLDIHSNEIGVEGSKYISEMKQLTSLNIGYNQISVEGAKYISGMKSLTSL 151

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               N I   G K    + Q    L +LN+  N IG+EG K +  +      +  L +  
Sbjct: 152 YIGYNQIGVEGSKYISEMKQ----LTSLNIGHNEIGEEGAKYISGM----KSLTSLNIGY 203

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG+K I+E+ +    L  L + +N I   G   ++       ++ SL++  N  G
Sbjct: 204 NQIGVEGSKYISEMKQ----LTSLNIGHNEISVEGSKYISGM----KSLTSLNIGYNQIG 255

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G+  +++     K L  L++  N IG EG + + SG+ S    L  L+IG N I  +G
Sbjct: 256 VEGSKYISE----MKQLTSLNIGYNEIGVEGAKYI-SGMKS----LTSLNIGYNQIGVEG 306

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDE 402
           +    +YI   K L  +N+  N+IG+E
Sbjct: 307 S----KYISEMKQLTSLNIGHNEIGEE 329


>gi|399497952|emb|CCG20304.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSVPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSV 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGVIAIANALKDSVPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 45.8 bits (107), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--------------------- 273
              LC  L  +  +  + LS ++L DEG  AIA  LK++                     
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSVPSLAVLEMAGNDITAEAASA 402

Query: 274 --------SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|73973032|ref|XP_852058.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Canis
           lupus familiaris]
          Length = 501

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T+++  L  +      A  L + L  + +L EL L  
Sbjct: 257 EWNLFLFTYQDCHSLAATIKACHTLKTFRLTRSKVDDDKARILIRSLLDHPALEELDLSH 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS     L VL + NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARAAAKLLS--HSHLRVLTLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 37/239 (15%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LKT  L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 272 AATIKACH-------TLKTFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +                             A GA +LA
Sbjct: 325 RAAAKLL-SHSHLRVLTLANNQVR----------------------------APGAQSLA 355

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  N +L  L+L  N I DEG +AL   L + K  L  L +G N +S   A  +++ +
Sbjct: 356 HALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGNELSEPTATLLSQVL 414

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               +L  INL  N IG +G +++ + +  N+T+   DL  +++  +    I + L  N
Sbjct: 415 TVNTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALCAN 473



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + Q  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYQDCHSLAATIKACHTLKTFRLTRSKVDDDKARILIRSLLDHPALEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ L L+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARAAAKLL-SHSHLRVLTLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 44/247 (17%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+ T  L  + +    A  + R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYQD--CHSLAATIKACHTLKTFRLTRSKVDDDKARILIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L  H ++  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PALEELDLSHNLIGDRGARAAAKLLS-HSHLRVLTLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            L+LR N + DE                                G + LA + +  N+ L
Sbjct: 366 SLNLRLNCIEDE--------------------------------GGQALAHALQ-TNKCL 392

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 622
           T++ L  NE+ +  A  ++Q L  N    +TS+NL+ N +       L   K L+  MS+
Sbjct: 393 TTLHLGGNELSEPTATLLSQVLTVN--TTLTSINLSCNHI------GLDGGKQLLEGMSD 444

Query: 623 KEVNIFF 629
            +  + F
Sbjct: 445 NKTLLEF 451


>gi|290980071|ref|XP_002672756.1| predicted protein [Naegleria gruberi]
 gi|284086335|gb|EFC40012.1| predicted protein [Naegleria gruberi]
          Length = 385

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 205/399 (51%), Gaps = 64/399 (16%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +L+++ N IGDEG K +       +G++ L   ++D    G +  A+L+     L  L
Sbjct: 20  LTSLDIADNQIGDEGSKFI-------SGMKHLTSLNIDRNQIGVEG-AKLISGMKSLISL 71

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            + +N I   G    A+ +     + SL +N N  G  GA ++++     K L  L+++ 
Sbjct: 72  SIGDNQIGVEG----AKLISGMKHLTSLDINRNQIGVEGAKSISR----MKQLTSLNIYY 123

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IG EG +++ SG+     +L  LDIG N I        ++YI   K L  +++Y N I
Sbjct: 124 NQIGAEGAKSI-SGMK----QLTSLDIGGNQI----GVEESKYISEMKQLTSLDIYNNQI 174

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G EGA+ I+  +KQ   +T++++G N I  +G+  I+ + +    +TSL++  N IG +G
Sbjct: 175 GVEGAKSIS-GMKQ---LTSLNIGFNRIGVEGSKLISEMKQ----LTSLNIGSNEIGVEG 226

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
           +K + E+     ++ +L + + +IG  G++++++M +    ++ LD+  N +      G 
Sbjct: 227 SKFIPEM----KHLTSLNIYYNEIGDEGSKYISEMKQ----LTSLDIYYNEI------GV 272

Query: 520 NGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
            G  +    I  +K +    +  N +  +GAK +++      + LTS+D+A N+I D+G+
Sbjct: 273 EGAKY----ISEMKQLTSLGISDNQIGVEGAKFISEM-----KLLTSLDIADNQIGDEGS 323

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
             I+      E  ++TSLN+ +N +   G   ++  K L
Sbjct: 324 KFIS------EMKSLTSLNVNSNQIGDEGAKLISGMKQL 356



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 196/392 (50%), Gaps = 65/392 (16%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D++    GDEG  F++   G       ++   N I   G K   G+  
Sbjct: 12  KFISEMKHLTSLDIADNQIGDEGSKFIS---GMKHLT-SLNIDRNQIGVEGAKLISGMK- 66

Query: 216 SNIALKTLNLSGNPIGDEGVKCLC--------DILVDNAGVE------RL-QLSSVDLR- 259
              +L +L++  N IG EG K +         DI  +  GVE      R+ QL+S+++  
Sbjct: 67  ---SLISLSIGDNQIGVEGAKLISGMKHLTSLDINRNQIGVEGAKSISRMKQLTSLNIYY 123

Query: 260 ----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
                EGAK+I+ + +    L  L++  N I       ++E       + SL +  N  G
Sbjct: 124 NQIGAEGAKSISGMKQ----LTSLDIGGNQIGVEESKYISEM----KQLTSLDIYNNQIG 175

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G    AK + G K L  L++  N IG EG     S L S   +L  L+IG+N I  +G
Sbjct: 176 VEG----AKSISGMKQLTSLNIGFNRIGVEG-----SKLISEMKQLTSLNIGSNEIGVEG 226

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
               +++I   K L  +N+Y N+IGDEG++ I++ +KQ   +T++D+  N I  +GA  I
Sbjct: 227 ----SKFIPEMKHLTSLNIYYNEIGDEGSKYISE-MKQ---LTSLDIYYNEIGVEGAKYI 278

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           + + +    +TSL ++ N IG +GAK +SE +K    + +L +   QIG  G++F+++M 
Sbjct: 279 SEMKQ----LTSLGISDNQIGVEGAKFISE-MKL---LTSLDIADNQIGDEGSKFISEM- 329

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
               +++ L++ +N + DE     +G+    S
Sbjct: 330 ---KSLTSLNVNSNQIGDEGAKLISGMKQLTS 358


>gi|157871015|ref|XP_001684057.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68127125|emb|CAJ04759.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 429

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 141/269 (52%), Gaps = 5/269 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-ALK 221
           A   + ++    G EG    A++L  N     +  + N +  +G +   G+L++++ AL+
Sbjct: 111 ALKRLGLASNRLGPEGAALTAKALERNTYLSSLDLSVNELGPSGAEWLAGILRNSVLALR 170

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G  GV  +CD +  N  + RL L +    DE A A+A +L+ N  L  L++
Sbjct: 171 VLQLHGNYLGPTGVMAICDAVKTNKELRRLTLGNNHATDEAAGAVAAMLEANDTLEELDI 230

Query: 282 NNNMIDYSGFTSLA-EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS--LRELHLH 338
             N +  +G  ++A + L +N+++  L L+GN  G +GAN L + L  ++   L++L L 
Sbjct: 231 CLNTLTANGVRTIARQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLKQLDLS 290

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
              +   G  A ++ L S    L  +++ +N++  + A  +A+ I +  ++  +++  N 
Sbjct: 291 SCGLTASG-GARVASLLSTSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNK 349

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNI 427
           IG+EGA ++ DA  +N  +  +   GNNI
Sbjct: 350 IGEEGASQLIDAAVRNAQLVALVTNGNNI 378



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 4/303 (1%)

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +S+  + T++L  N +G  G   +   L +++ V  + +   D+  EG   +A ++  + 
Sbjct: 24  ESDTPIHTIDLMDNQLGPTGAVKIASCL-ESSPVTEVFICYNDIGKEGCDGLAGVVNLSH 82

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+VL++  N +  S    L  ++  ++ ++ L L  N  G  GA   AK LE N  L  
Sbjct: 83  SLQVLDIRGNQLSASDVHRLLRSVSMSTALKRLGLASNRLGPEGAALTAKALERNTYLSS 142

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N +G  G   L   L +    L VL +  N +   G   + + +K  K L  + L
Sbjct: 143 LDLSVNELGPSGAEWLAGILRNSVLALRVLQLHGNYLGPTGVMAICDAVKTNKELRRLTL 202

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYN 453
             N   DE A  +A  L+ N T+  +D+  N + + G   IAR  L  N+ +  L L+ N
Sbjct: 203 GNNHATDEAAGAVAAMLEANDTLEELDICLNTLTANGVRTIARQGLAKNTSLAVLSLSGN 262

Query: 454 PIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +G  GA  L++VL  H    +  L L  C + ASG   VA +L  + ++  ++L  N L
Sbjct: 263 EVGPVGANELTQVLTSHQRSVLKQLDLSSCGLTASGGARVASLLSTSMSLKEINLSDNAL 322

Query: 512 RDE 514
            DE
Sbjct: 323 DDE 325



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 8/335 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++D+     G  G   +A  L  +    EV    N I   G     GV+  + +L+ L
Sbjct: 29  IHTIDLMDNQLGPTGAVKIASCL-ESSPVTEVFICYNDIGKEGCDGLAGVVNLSHSLQVL 87

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++ GN +    V  L   +  +  ++RL L+S  L  EGA   A+ L+ N+ L  L+L+ 
Sbjct: 88  DIRGNQLSASDVHRLLRSVSMSTALKRLGLASNRLGPEGAALTAKALERNTYLSSLDLSV 147

Query: 284 NMIDYSGFTSLAEALLENST--IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           N +  SG   LA  +L NS   +R L L+GNY G  G  A+   ++ NK LR L L  N 
Sbjct: 148 NELGPSGAEWLA-GILRNSVLALRVLQLHGNYLGPTGVMAICDAVKTNKELRRLTLGNNH 206

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIG 400
             DE   A+ + L +    L  LDI  N+++A G   +A + +    SL  ++L  N++G
Sbjct: 207 ATDEAAGAVAAMLEAND-TLEELDICLNTLTANGVRTIARQGLAKNTSLAVLSLSGNEVG 265

Query: 401 DEGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             GA ++   L   Q   +  +DL    + + G + +A +L  +  +  ++L+ N +  +
Sbjct: 266 PVGANELTQVLTSHQRSVLKQLDLSSCGLTASGGARVASLLSTSMSLKEINLSDNALDDE 325

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            A  L++ +     I+ + +   +IG  GA  + D
Sbjct: 326 AAVRLAQNITDGITISVVDVSCNKIGEEGASQLID 360



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 39/245 (15%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+ +N +   GA  +A  +++   +  + +  NDIG EG + +A  +  + ++  +D+ 
Sbjct: 32  IDLMDNQLGPTGAVKIASCLES-SPVTEVFICYNDIGKEGCDGLAGVVNLSHSLQVLDIR 90

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN + +     + R +  ++ +  L LA N +G +GA   ++ L+ +  +++L L   ++
Sbjct: 91  GNQLSASDVHRLLRSVSMSTALKRLGLASNRLGPEGAALTAKALERNTYLSSLDLSVNEL 150

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G SGAE++A +LR     S+L LR                                L  N
Sbjct: 151 GPSGAEWLAGILRN----SVLALR-----------------------------VLQLHGN 177

Query: 544 YL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
           YL   G   +  + K  N+ L  + L  N   D+ A A+A  L+AN+   +  L++  N 
Sbjct: 178 YLGPTGVMAICDAVKT-NKELRRLTLGNNHATDEAAGAVAAMLEAND--TLEELDICLNT 234

Query: 602 LTKFG 606
           LT  G
Sbjct: 235 LTANG 239



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK--AFDGVLQS 216
           KELR  +   +   +  DE    +A  L  N T EE+    N +TA G++  A  G L  
Sbjct: 195 KELRRLT---LGNNHATDEAAGAVAAMLEANDTLEELDICLNTLTANGVRTIARQG-LAK 250

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           N +L  L+LSGN +G  G   L  +L  +  + +++L LSS  L   G   +A LL  + 
Sbjct: 251 NTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLKQLDLSSCGLTASGGARVASLLSTSM 310

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+ + L++N +D      LA+ + +  TI  + ++ N  G  GA+ L      N  L  
Sbjct: 311 SLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQLIDAAVRNAQLVA 370

Query: 335 LHLHGNSI 342
           L  +GN+I
Sbjct: 371 LVTNGNNI 378


>gi|399497914|emb|CCG20285.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSENALGEKGVRAFGKLLQSQNNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSENALGEKGVRAFGKLLQSQNN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSENALGEKGVRAFGKLLQSQNNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANTLKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIYAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSENALGEKGVRAFGKLLQSQNNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|410959302|ref|XP_003986250.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Felis
           catus]
          Length = 504

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 101/186 (54%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 260 EWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARVLIRSLLDHPALEELDLSH 319

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 320 NLVGDRGARAAAKLLS--HSRLRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNCI 377

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ NR +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 378 EDEGGQALAHALQTNRCLTTLHLGGNELSEPTATLLSQVLAVNTTLTSINLSCNHIGLDG 437

Query: 460 AKALSE 465
            K L E
Sbjct: 438 GKQLLE 443



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 275 AATIKACH-------TLKIFRLTRSKVDDDKARVLIRSLLDHPALEELDLSHNLVGDRGA 327

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 328 RAAAKLL-SHSRLRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 386

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ N+ L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 387 HALQTNRCLTTLHLGGNELS-EPTATLLSQVLAVNTTLTSINLSCNHIGLDGGKQLLEGM 445

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + ++LL  +L ++D+  E    I  AL  NR
Sbjct: 446 SDNRTLLEFDLRLSDVAQESEYLIGRALCANR 477



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N +  +GA  
Sbjct: 271 CHSLAATIKACHTLKIFRLTRSKVDDDKARVLIRSLLDHPA-LEELDLSHNLVGDRGARA 329

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 330 AAKLLSHSR-LRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 388

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 389 LQTNRCLTTLHLGGNELSEPTATLLSQVLAVNTTLTSINLSCNHIGLDGGKQLLEGMSDN 448

Query: 499 NTISILDLRANGLRDE 514
            T+   DLR + +  E
Sbjct: 449 RTLLEFDLRLSDVAQE 464



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 259 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARVLIRSLLDHPALEELDLS 318

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 319 HNLVGDRGARAAAKLL-SHSRLRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNCI 377

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 378 EDEGGQALAHALQTNRCLTTLHLGGNELSEPTATLLSQVLAVNTTLTSINLSCNHIGLDG 437

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  N++L E  L  + +  E
Sbjct: 438 GKQLLEGMSDNRTLLEFDLRLSDVAQE 464



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 26/226 (11%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 252 VKDCGMNFEWNLFLFTYRD--CHSLAATIKACHTLKIFRLTRSKVDDDKARVLIRSLLDH 309

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N +G  GA+A +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 310 PALEELDLSHNLVGDRGARAAAKLLS-HSRLRVLNLANNQVRALGAQSLAHALAHNTNLI 368

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ---------GAKCLAQ 553
            L+LR N + DE                +L H L  + C+  L           A  L+Q
Sbjct: 369 SLNLRLNCIEDE-------------GGQALAHALQTNRCLTTLHLGGNELSEPTATLLSQ 415

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
               VN  LTSI+L+ N I  DG   + + +  N  +    L L++
Sbjct: 416 VL-AVNTTLTSINLSCNHIGLDGGKQLLEGMSDNRTLLEFDLRLSD 460


>gi|399498106|emb|CCG20381.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMTDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNTTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L +  + IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMTDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMTDGISQEAANAVSELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 4/258 (1%)

Query: 136 TNLLSGF--TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           TNL   F  T  + +E+   ++E          +       GDEG   +AE +  +   E
Sbjct: 242 TNLEELFLMTDGISQEAANAVSELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKRSPLLE 301

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           +   ++  + + G       L     LK L+L  N  G E    LC  L  +  +  + L
Sbjct: 302 DFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYL 361

Query: 254 SSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           S ++L DEGA AIA  LK+++  L VLE+  N I      ++A  +     +  L L  N
Sbjct: 362 SYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGEN 421

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                GA  +AK LEG+  L E+ +  N++   G R L   +   K +  +L++  N IS
Sbjct: 422 ELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTV-LHKDEFKLLNVNGNFIS 480

Query: 373 AKGAFHVAEYIKNCKSLL 390
            +G   + E  K    +L
Sbjct: 481 EEGVDELKEIFKKSPEML 498



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MTDGISQEAANAVSELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|207743100|ref|YP_002259492.1| lrr-gala family type III effector protein c terminal part
           [Ralstonia solanacearum IPO1609]
 gi|206594497|emb|CAQ61424.1| probable lrr-gala family type III effector protein c terminal part
           [Ralstonia solanacearum IPO1609]
          Length = 253

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 142/276 (51%), Gaps = 39/276 (14%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N+    ++ ++NGI   G++A    L +N  + TL++S N IGDEG +     L  N  +
Sbjct: 7   NKKLTTLNVSSNGIGPVGVRA----LAANTTITTLDISNNEIGDEGARA----LASNTAL 58

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            RL  S   +  EG +A+A     ++ L  L+L+ N I+  G     EAL  N+T+R+LH
Sbjct: 59  TRLDASDCGIGPEGTQALAT----STTLTSLDLSYNAIEAEGV----EALGRNTTLRTLH 110

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             GN  G   A  LA     N +L  L+L  N+IG+ G RA  +  +     L  L++ N
Sbjct: 111 ACGNELGHREAELLAA----NTTLTVLNLSSNAIGNAGARAFGANTT-----LVELNLSN 161

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I       V E+  N K L  ++L  N IGD  A+ +A     + T+TT+++G N I 
Sbjct: 162 NGIE-----RVPEWADNGK-LTTLDLSNNQIGDTAAQVLA----ASHTLTTLNVGSNRIG 211

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             GA A+A     N+ +T+L+++ N IG  G  AL+
Sbjct: 212 DTGACALA----GNTTLTTLNVSLNRIGKAGMLALA 243



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 51/234 (21%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           A  +N+ +TT+++  N I   G     R L  N+ IT+LD++ N IG +GA+AL+     
Sbjct: 3   AFARNKKLTTLNVSSNGIGPVGV----RALAANTTITTLDISNNEIGDEGARALAS---- 54

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC---NGLSFFH 526
           +  +  L    C IG  G + +A     + T++ LDL  N +  E          L   H
Sbjct: 55  NTALTRLDASDCGIGPEGTQALA----TSTTLTSLDLSYNAIEAEGVEALGRNTTLRTLH 110

Query: 527 SAIYSLKH----MLFYSLCINYLQ---------GAKCLAQSFKVV--------------- 558
           +    L H    +L  +  +  L          GA+    +  +V               
Sbjct: 111 ACGNELGHREAELLAANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEW 170

Query: 559 --NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
             N  LT++DL+ N+I D      AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 171 ADNGKLTTLDLSNNQIGDTA----AQVLAASH--TLTTLNVGSNRIGDTGACAL 218


>gi|156229388|emb|CAL69642.1| Ran GTPase-activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N + DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENKLKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENKLKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFCNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|443719206|gb|ELU09480.1| hypothetical protein CAPTEDRAFT_200350 [Capitella teleta]
          Length = 539

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 116/226 (51%), Gaps = 1/226 (0%)

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +D     ++  AL  N  + SL ++ N  G +G   +A  +  N+ +R L L  N IG  
Sbjct: 103 MDKRDALAICSALQGNIEVVSLIVDDNNLGWIGVGYVALMMCENEVIRTLGLAKNQIGKR 162

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G R +M  L      L+ LDI  N I       +A+ IK+ ++L ++NL  N+I D+GA+
Sbjct: 163 GCRVVMEMLLENH-VLSSLDISGNQIDDNDMEFIAKIIKDNRNLTYLNLSHNNISDKGAK 221

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +  A+  N T+ ++DL  N I  +G  AI+  L +N V++S+ LAYN +   GA+A+ E
Sbjct: 222 FLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAENVVMSSISLAYNGLCITGARAMGE 281

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            L+ +  +  L L   ++   G  F+A  L  N  +  L +  N +
Sbjct: 282 CLQINEILTDLDLTCNRMFDEGVAFIAKALSTNENLQKLRISNNAM 327



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 1/212 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N G  G+ ++A  +  N+    +  A N I   G +    +L  N  L +L++SGN I D
Sbjct: 130 NLGWIGVGYVALMMCENEVIRTLGLAKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDD 189

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             ++ +  I+ DN  +  L LS  ++ D+GAK +   + +N  LR L+L+ N I   G  
Sbjct: 190 NDMEFIAKIIKDNRNLTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGV 249

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +++E L EN  + S+ L  N     GA A+ + L+ N+ L +L L  N + DEG+  +  
Sbjct: 250 AISEGLAENVVMSSISLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAK 309

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            LS+ +  L  L I NN+++      V   I+
Sbjct: 310 ALSTNEN-LQKLRISNNAMTTASVITVLTTIQ 340



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 1/244 (0%)

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G ++  ++ K + + G  +       +C  L  N  V  L +   +L   G   +A ++ 
Sbjct: 85  GAVRKGLSKKEIRVKGRGMDKRDALAICSALQGNIEVVSLIVDDNNLGWIGVGYVALMMC 144

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N ++R L L  N I   G   + E LLEN  + SL ++GN         +AK ++ N++
Sbjct: 145 ENEVIRTLGLAKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRN 204

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L  N+I D+G + L   ++  +  L  LD+  N I  +G   ++E +     +  
Sbjct: 205 LTYLNLSHNNISDKGAKFLQPAIADNE-TLRSLDLSWNKIRPRGGVAISEGLAENVVMSS 263

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I+L  N +   GA  + + L+ N  +T +DL  N +  +G + IA+ L  N  +  L ++
Sbjct: 264 ISLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALSTNENLQKLRIS 323

Query: 452 YNPI 455
            N +
Sbjct: 324 NNAM 327



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 25/249 (10%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD  + + +   A+ +  Y++ C+ +      +N +G         A+++  +   I + 
Sbjct: 54  LDGEDRATTPYDAYGLRTYMRACRKM-----KINPVG---------AVRKGLSKKEIRVK 99

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           G  +  + A AI   L+ N  + SL +  N +G  G   ++ ++  +  I TL L   QI
Sbjct: 100 GRGMDKRDALAICSALQGNIEVVSLIVDDNNLGWIGVGYVALMMCENEVIRTLGLAKNQI 159

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G  G   V +ML  N+ +S LD+  N + D      N + F    I   +++ + +L  N
Sbjct: 160 GKRGCRVVMEMLLENHVLSSLDISGNQIDD------NDMEFIAKIIKDNRNLTYLNLSHN 213

Query: 544 YL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
            +  +GAK L Q     NE L S+DL++N+IR  G  AI++ L   E+V ++S++LA N 
Sbjct: 214 NISDKGAKFL-QPAIADNETLRSLDLSWNKIRPRGGVAISEGLA--ENVVMSSISLAYNG 270

Query: 602 LTKFGQSAL 610
           L   G  A+
Sbjct: 271 LCITGARAM 279



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 31/237 (13%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  ++TL L+ N IG  G + + ++L++N  +  L +S   + D   + IA+++K+N  L
Sbjct: 146 NEVIRTLGLAKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRNL 205

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L++N I   G   L  A+ +N T+RSL L+ N     G  A+++GL  N       
Sbjct: 206 TYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAEN------- 258

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
                        +MS +S          +  N +   GA  + E ++  + L  ++L  
Sbjct: 259 ------------VVMSSIS----------LAYNGLCITGARAMGECLQINEILTDLDLTC 296

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLA 451
           N + DEG   IA AL  N  +  + +  N + +     +   +++N  S I  LD++
Sbjct: 297 NRMFDEGVAFIAKALSTNENLQKLRISNNAMTTASVITVLTTIQENPESAIVLLDMS 353



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 1/213 (0%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E     ++ ++    G  G   + E L  N     +  + N I    ++    +++ N  
Sbjct: 145 ENEVIRTLGLAKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRN 204

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LNLS N I D+G K L   + DN  +  L LS   +R  G  AI+E L  N ++  +
Sbjct: 205 LTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAENVVMSSI 264

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N +  +G  ++ E L  N  +  L L  N     G   +AK L  N++L++L +  
Sbjct: 265 SLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALSTNENLQKLRISN 324

Query: 340 NSIGDEGIRALMSGLSSR-KGKLAVLDIGNNSI 371
           N++    +  +++ +    +  + +LD+ N  I
Sbjct: 325 NAMTTASVITVLTTIQENPESAIVLLDMSNMHI 357



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E   E    SS+D+SG    D  + F+A+ +  N+    ++ + N I+  G K     + 
Sbjct: 169 EMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRNLTYLNLSHNNISDKGAKFLQPAIA 228

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  L++L+LS N I   G   + + L +N  +  + L+   L   GA+A+ E L+ N I
Sbjct: 229 DNETLRSLDLSWNKIRPRGGVAISEGLAENVVMSSISLAYNGLCITGARAMGECLQINEI 288

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L  L+L  N +   G   +A+AL  N  ++ L ++ N
Sbjct: 289 LTDLDLTCNRMFDEGVAFIAKALSTNENLQKLRISNN 325



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+ R  + +++S  N  D+G  FL  ++  N+T   +  + N I   G  A    L  N+
Sbjct: 200 KDNRNLTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAENV 259

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            + +++L+ N +   G + + + L  N  +  L L+   + DEG   IA+ L  N  L+ 
Sbjct: 260 VMSSISLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALSTNENLQK 319

Query: 279 LELNNNMIDYSGFTSLAEALLEN 301
           L ++NN +  +   ++   + EN
Sbjct: 320 LRISNNAMTTASVITVLTTIQEN 342


>gi|301757308|ref|XP_002914541.1| PREDICTED: t-complex-associated testis-expressed protein 1-like
           [Ailuropoda melanoleuca]
 gi|281345698|gb|EFB21282.1| hypothetical protein PANDA_002398 [Ailuropoda melanoleuca]
          Length = 499

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 255 EWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSH 314

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS     L VLD+ NN + A GA  +A  + +  +L  +NL +N I
Sbjct: 315 NLIGDRGARAAAKLLS--HSHLRVLDLANNQVRAPGAQSLAHALAHNTNLTSLNLRLNCI 372

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 373 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLTSINLSCNHIGLDG 432

Query: 460 AKALSE 465
            K L E
Sbjct: 433 GKQLLE 438



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 270 AATIKACH-------TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 322

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL+L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 323 RAAAKLL-SHSHLRVLDLANNQVRAPGAQSLAHALAHNTNLTSLNLRLNCIEDEGGQALA 381

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 382 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLTVNTTLTSINLSCNHIGLDGGKQLLEGM 440

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 441 SDNKTLLEFDLRLSDVAQESEYLIGQALCANR 472



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 254 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 313

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ L+L+ N +   G + L   L  N  +  L L    +
Sbjct: 314 HNLIGDRGARAAAKLL-SHSHLRVLDLANNQVRAPGAQSLAHALAHNTNLTSLNLRLNCI 372

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 373 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLTSINLSCNHIGLDG 432

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 433 GKQLLEGMSDNKTLLEFDLRLSDVAQE 459



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 247 VKDCGMNFEWNLFLFTYRD--CHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDH 304

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L  H ++  L L   Q+ A GA+ +A  L +N  ++
Sbjct: 305 PALEELDLSHNLIGDRGARAAAKLLS-HSHLRVLDLANNQVRAPGAQSLAHALAHNTNLT 363

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      VN  
Sbjct: 364 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTT 417

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 418 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 455


>gi|189501572|ref|YP_001957289.1| cyclin domain-containing protein [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497013|gb|ACE05560.1| cyclin domain protein F-box protein [Candidatus Amoebophilus
           asiaticus 5a2]
          Length = 770

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 183/381 (48%), Gaps = 48/381 (12%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + TLNL  N IG EG   +   L     V  L L    +  EGA  +A+ L+   + + L
Sbjct: 417 VHTLNLRFNEIGAEGAIEVAKAL-QGTQVHTLDLVYNQIGAEGAIEVAKALQGTQVHK-L 474

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L+NN I   G   +A+AL + + + +L+L GN  G  GA  LAK L+G + +  L+L  
Sbjct: 475 DLSNNQIGAEGAIEVAKAL-QGTQVHTLNLMGNQIGNEGAIELAKALQGTQ-VHTLYLRR 532

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I +EG   +   L     ++  L + +N I A+G   +A  ++  + +  + L  N I
Sbjct: 533 NQIDNEGAIEVAKALQG--AQVHTLSLSDNQIGAEGVIELANALQGTQ-VHTLYLSHNQI 589

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G+EGA  +A AL Q   + T+DL  N I ++GA  +A+ L+   V   LDL++N I  +G
Sbjct: 590 GNEGAIGLAKAL-QGAQVYTLDLSHNQIDNEGAIGLAKALQGTQV-HKLDLSHNQIDNEG 647

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
           A  L++ L+    ++ L L   +I   GA  +A  L+    +  L+L  N + +E   G 
Sbjct: 648 AIGLAKALQG-TQVHKLDLSHSKIDNEGAIGLAKALQ-GTQVHTLNLMINEIGNE---GA 702

Query: 520 NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
            GL+                     LQG +            + ++DL  N I ++GA  
Sbjct: 703 IGLA-------------------KALQGTQ------------VHTLDLMANAIGNEGAIG 731

Query: 580 IAQALKANEDVAVTSLNLANN 600
           +A+AL+  +   V +L L+ N
Sbjct: 732 LAKALQGTQ---VHTLGLSAN 749



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 157/338 (46%), Gaps = 38/338 (11%)

Query: 156 EFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           E AK L+     ++D+     G EG   +A++L   Q   ++  + N I A G       
Sbjct: 434 EVAKALQGTQVHTLDLVYNQIGAEGAIEVAKALQGTQV-HKLDLSNNQIGAEGAIEVAKA 492

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           LQ    + TLNL GN IG+EG   L   L     V  L L    + +EGA  +A+ L+  
Sbjct: 493 LQGT-QVHTLNLMGNQIGNEGAIELAKAL-QGTQVHTLYLRRNQIDNEGAIEVAKALQGA 550

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            +   L L++N I   G   LA AL + + + +L+L+ N  G  GA  LAK L+G + + 
Sbjct: 551 QV-HTLSLSDNQIGAEGVIELANAL-QGTQVHTLYLSHNQIGNEGAIGLAKALQGAQ-VY 607

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK------ 387
            L L  N I +EG   L   L   +  +  LD+ +N I  +GA  +A+ ++  +      
Sbjct: 608 TLDLSHNQIDNEGAIGLAKALQGTQ--VHKLDLSHNQIDNEGAIGLAKALQGTQVHKLDL 665

Query: 388 --------------------SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
                                +  +NL +N+IG+EGA  +A AL Q   + T+DL  N I
Sbjct: 666 SHSKIDNEGAIGLAKALQGTQVHTLNLMINEIGNEGAIGLAKAL-QGTQVHTLDLMANAI 724

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            ++GA  +A+ L+   V T L L+ N IG    + L E
Sbjct: 725 GNEGAIGLAKALQGTQVHT-LGLSANQIGNATKQLLVE 761



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 168/337 (49%), Gaps = 35/337 (10%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           L+ + + +L+L  N  GA GA  +AK L+G + +  L L  N IG EG   +   L   +
Sbjct: 412 LQGTQVHTLNLRFNEIGAEGAIEVAKALQGTQ-VHTLDLVYNQIGAEGAIEVAKALQGTQ 470

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
             +  LD+ NN I A+GA  VA+ ++  + +  +NL  N IG+EGA ++A AL Q   + 
Sbjct: 471 --VHKLDLSNNQIGAEGAIEVAKALQGTQ-VHTLNLMGNQIGNEGAIELAKAL-QGTQVH 526

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T+ L  N I ++GA  +A+ L+   V T L L+ N IGA+G   L+  L+    ++TL L
Sbjct: 527 TLYLRRNQIDNEGAIEVAKALQGAQVHT-LSLSDNQIGAEGVIELANALQG-TQVHTLYL 584

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG---------CNGLSFFHSAI 529
              QIG  GA  +A  L+    +  LDL  N + +E   G          + L   H+ I
Sbjct: 585 SHNQIGNEGAIGLAKALQ-GAQVYTLDLSHNQIDNEGAIGLAKALQGTQVHKLDLSHNQI 643

Query: 530 ---------YSLKHMLFYSLCINYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
                     +L+    + L +++     +GA  LA++ +     + +++L  NEI ++G
Sbjct: 644 DNEGAIGLAKALQGTQVHKLDLSHSKIDNEGAIGLAKALQ--GTQVHTLNLMINEIGNEG 701

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           A  +A+AL+  +   V +L+L  N +   G   L  A
Sbjct: 702 AIGLAKALQGTQ---VHTLDLMANAIGNEGAIGLAKA 735



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 46/315 (14%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           L+++ I +L L  N  GA  A  LA+ L+G + +  L+L  N IG EG   +   L   +
Sbjct: 386 LKDTDIHTLELR-NKAGAKRAIELARALQGTQ-VHTLNLRFNEIGAEGAIEVAKALQGTQ 443

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
             +  LD+  N I A+GA  VA+ ++  + +  ++L  N IG EGA ++A AL Q   + 
Sbjct: 444 --VHTLDLVYNQIGAEGAIEVAKALQGTQ-VHKLDLSNNQIGAEGAIEVAKAL-QGTQVH 499

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T++L GN I ++GA  +A+ L+   V T L L  N I  +GA  +++ L+    ++TL L
Sbjct: 500 TLNLMGNQIGNEGAIELAKALQGTQVHT-LYLRRNQIDNEGAIEVAKALQG-AQVHTLSL 557

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
              QIGA G   +A+ L+    +  L L  N + +E   G  GL+               
Sbjct: 558 SDNQIGAEGVIELANALQ-GTQVHTLYLSHNQIGNE---GAIGLA--------------- 598

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                 LQGA+            + ++DL+ N+I ++GA  +A+AL+  +   V  L+L+
Sbjct: 599 ----KALQGAQ------------VYTLDLSHNQIDNEGAIGLAKALQGTQ---VHKLDLS 639

Query: 599 NNFLTKFGQSALTDA 613
           +N +   G   L  A
Sbjct: 640 HNQIDNEGAIGLAKA 654


>gi|399497892|emb|CCG20274.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKRLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKRLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKR-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKRLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAXRIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A   +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKRLLAKLSL 418


>gi|327260015|ref|XP_003214831.1| PREDICTED: ribonuclease inhibitor-like [Anolis carolinensis]
          Length = 456

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 181/419 (43%), Gaps = 35/419 (8%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRD 260
           ++    K    VL  N  L  L L+ N +GD G+  LC  +L  +  +++L L + +L +
Sbjct: 35  LSTKHFKDISTVLTKNQVLTELKLNNNEVGDSGMDVLCKGLLHPSCKLQKLWLQNCNLTE 94

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGA 319
              + +  +L + + L  L L +N +  SG   L + LL+ N  + SL L+     A   
Sbjct: 95  ACCEHLRSVLSSKTSLTELHLGDNTLGESGAKVLCQGLLDPNCKLESLQLDYCELSAANV 154

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+  L    SL+EL L  NS GD  ++ L  G+   K  L  L + N   +A+    +
Sbjct: 155 EALSSALRTKPSLKELSLCNNSFGDAAVKLLCQGVQDSKCNLQTLRLENCDFTAESCGDL 214

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIAD-ALKQNRTITTIDLGGNNIHSKGASAIARV 438
              +    SL  + +  N IGD G   +   AL  N  +  + L    I + G   ++ +
Sbjct: 215 GTILSTKPSLTELCIGENKIGDRGVALLCQGALNPNCHVQKLWLWECGITAHGCKDLSNL 274

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRY 497
           L +   I  + L  N +   G   LS+ LK     + ++ L  C +  +  + ++  L  
Sbjct: 275 LGNKETIKEISLIGNDVKDQGMDFLSQGLKNPKCKLQSIWLRECGLTGTCCKSLSQALST 334

Query: 498 NNTISILDLRANGLRD----EVCSG-----CN--GLSFFHSAIYSLKHMLFYSLCINYLQ 546
           N T+  L +  N L D    ++C G     CN   LS   S +                 
Sbjct: 335 NGTLKELHIGGNQLDDAGVVQICEGVLSPTCNLQSLSVGQSKLT---------------- 378

Query: 547 GAKCLAQSFKVV--NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
            A C  +  +V+    +L  +D++++ I D+GA  + +A+K N +  +  L L + F T
Sbjct: 379 -AACCDKLAEVIAGKPSLQELDVSYSHIGDEGAMKLCEAVK-NPNCHLKYLILYDTFWT 435



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 162/358 (45%), Gaps = 5/358 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAAGIKAFDGVLQSNIAL 220
           +  + + ++    GD G+  L + L +     +  +  N  +T A  +    VL S  +L
Sbjct: 51  QVLTELKLNNNEVGDSGMDVLCKGLLHPSCKLQKLWLQNCNLTEACCEHLRSVLSSKTSL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+L  N +G+ G K LC  L+D N  +E LQL   +L     +A++  L+    L+ L
Sbjct: 111 TELHLGDNTLGESGAKVLCQGLLDPNCKLESLQLDYCELSAANVEALSSALRTKPSLKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L NN    +    L + + ++   +++L L      A     L   L    SL EL + 
Sbjct: 171 SLCNNSFGDAAVKLLCQGVQDSKCNLQTLRLENCDFTAESCGDLGTILSTKPSLTELCIG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G+  L  G  +    +  L +    I+A G   ++  + N +++  I+L  ND
Sbjct: 231 ENKIGDRGVALLCQGALNPNCHVQKLWLWECGITAHGCKDLSNLLGNKETIKEISLIGND 290

Query: 399 IGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + D+G + ++  LK  +  + +I L    +      ++++ L  N  +  L +  N +  
Sbjct: 291 VKDQGMDFLSQGLKNPKCKLQSIWLRECGLTGTCCKSLSQALSTNGTLKELHIGGNQLDD 350

Query: 458 DGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            G   + E VL    N+ +L +G  ++ A+  + +A+++    ++  LD+  + + DE
Sbjct: 351 AGVVQICEGVLSPTCNLQSLSVGQSKLTAACCDKLAEVIAGKPSLQELDVSYSHIGDE 408



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 13/258 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   + +   +FGD  +  L + +  ++   + +       TA        +L +  +L 
Sbjct: 166 SLKELSLCNNSFGDAAVKLLCQGVQDSKCNLQTLRLENCDFTAESCGDLGTILSTKPSLT 225

Query: 222 TLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L +  N IGD GV  LC   L  N  V++L L    +   G K ++ LL N   ++ + 
Sbjct: 226 ELCIGENKIGDRGVALLCQGALNPNCHVQKLWLWECGITAHGCKDLSNLLGNKETIKEIS 285

Query: 281 LNNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L  N +   G   L++ L      L++  +R   L G         +L++ L  N +L+E
Sbjct: 286 LIGNDVKDQGMDFLSQGLKNPKCKLQSIWLRECGLTGTC-----CKSLSQALSTNGTLKE 340

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           LH+ GN + D G+  +  G+ S    L  L +G + ++A     +AE I    SL  +++
Sbjct: 341 LHIGGNQLDDAGVVQICEGVLSPTCNLQSLSVGQSKLTAACCDKLAEVIAGKPSLQELDV 400

Query: 395 YMNDIGDEGAEKIADALK 412
             + IGDEGA K+ +A+K
Sbjct: 401 SYSHIGDEGAMKLCEAVK 418



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 140/310 (45%), Gaps = 4/310 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     G+ G   L + L   N   E +      ++AA ++A    L++  +LK
Sbjct: 109 SLTELHLGDNTLGESGAKVLCQGLLDPNCKLESLQLDYCELSAANVEALSSALRTKPSLK 168

Query: 222 TLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+L  N  GD  VK LC  + D+   ++ L+L + D   E    +  +L     L  L 
Sbjct: 169 ELSLCNNSFGDAAVKLLCQGVQDSKCNLQTLRLENCDFTAESCGDLGTILSTKPSLTELC 228

Query: 281 LNNNMIDYSGFTSLAE-ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +  N I   G   L + AL  N  ++ L L      A G   L+  L   ++++E+ L G
Sbjct: 229 IGENKIGDRGVALLCQGALNPNCHVQKLWLWECGITAHGCKDLSNLLGNKETIKEISLIG 288

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N + D+G+  L  GL + K KL  + +    ++      +++ +    +L  +++  N +
Sbjct: 289 NDVKDQGMDFLSQGLKNPKCKLQSIWLRECGLTGTCCKSLSQALSTNGTLKELHIGGNQL 348

Query: 400 GDEGAEKIAD-ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            D G  +I +  L     + ++ +G + + +     +A V+     +  LD++Y+ IG +
Sbjct: 349 DDAGVVQICEGVLSPTCNLQSLSVGQSKLTAACCDKLAEVIAGKPSLQELDVSYSHIGDE 408

Query: 459 GAKALSEVLK 468
           GA  L E +K
Sbjct: 409 GAMKLCEAVK 418



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 148/373 (39%), Gaps = 54/373 (14%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG----------- 325
           + + L++  +    F  ++  L +N  +  L LN N  G  G + L KG           
Sbjct: 26  KTIRLDDCSLSTKHFKDISTVLTKNQVLTELKLNNNEVGDSGMDVLCKGLLHPSCKLQKL 85

Query: 326 ------------------LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
                             L    SL ELHL  N++G+ G + L  GL     KL  L + 
Sbjct: 86  WLQNCNLTEACCEHLRSVLSSKTSLTELHLGDNTLGESGAKVLCQGLLDPNCKLESLQLD 145

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNN 426
              +SA     ++  ++   SL  ++L  N  GD   + +   ++ ++  + T+ L   +
Sbjct: 146 YCELSAANVEALSSALRTKPSLKELSLCNNSFGDAAVKLLCQGVQDSKCNLQTLRLENCD 205

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGA 485
             ++    +  +L     +T L +  N IG  G   L +  L  + ++  L L  C I A
Sbjct: 206 FTAESCGDLGTILSTKPSLTELCIGENKIGDRGVALLCQGALNPNCHVQKLWLWECGITA 265

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML---FYSLCI 542
            G + ++++L    TI  + L  N ++D+      G+ F    + + K  L   +   C 
Sbjct: 266 HGCKDLSNLLGNKETIKEISLIGNDVKDQ------GMDFLSQGLKNPKCKLQSIWLREC- 318

Query: 543 NYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
             L G  C  L+Q+    N  L  + +  N++ D G   I       E V   + NL + 
Sbjct: 319 -GLTGTCCKSLSQALS-TNGTLKELHIGGNQLDDAGVVQIC------EGVLSPTCNLQS- 369

Query: 601 FLTKFGQSALTDA 613
                GQS LT A
Sbjct: 370 --LSVGQSKLTAA 380


>gi|91205844|ref|YP_538199.1| hypothetical protein RBE_1029 [Rickettsia bellii RML369-C]
 gi|91069388|gb|ABE05110.1| Leucine-rich repeat protein [Rickettsia bellii RML369-C]
          Length = 472

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 58/389 (14%)

Query: 223 LNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           LN+ GN +G  G K +  I   DN  + +L ++  ++       I  LLK +  LRVL L
Sbjct: 27  LNIIGNKVGTWGAKEIIYIFKFDN--LTKLNITYSEIGKRWLILIFSLLKFHDSLRVLNL 84

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++N+I         E ++   T   +  N              GL+ N SL +L++  N 
Sbjct: 85  SDNIIK-------NEKVIVEKTWLPMIFN--------------GLKFNISLTKLNISNNL 123

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG E  R +   L      L  LDI NN +  + A   A ++K+  SL  +N+  N IG 
Sbjct: 124 IGQEETRVIFDALKFHNS-LTALDISNNLMGKERAISNAFFLKSNTSLTELNIASNKIGK 182

Query: 402 EGAEKIADALKQNRTITTIDLGGNN-------IHSKGASAIARVLKDNSVITSLDLAYNP 454
           E    I DALK N+++  ++L  N        I +K  +AI   LK N+ +T+LD++ N 
Sbjct: 183 EWTTVIFDALKFNKSLRVLNLSNNTLEREKTIIVTKWITAIFYALKSNNSLTTLDISNNL 242

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG---- 510
           IG + A  +   LKF+ ++  L + +  I     E   + L++NN++ +L+L  N     
Sbjct: 243 IGREEAIVIFNALKFNKSLTELNISYNLIEKEWIEAAFNALKFNNSLRVLNLSNNKIGEK 302

Query: 511 ---LRDEVCSGC---------NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
              + D + SG          N L +F      +++        N +Q  + L +    +
Sbjct: 303 EIVITDTLKSGSPLNELDITNNSLQYFTKIEEKIQY--------NNIQYNEQLTRFILFL 354

Query: 559 NEALTSIDLAFNEIRDDG--AFAIAQALK 585
            +A    +   N IR+D    F IA A+K
Sbjct: 355 KKAFPDKNEQINTIRNDSYDIFKIASAIK 383



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 24/246 (9%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F+G L+ NI+L  LN+S N IG E  + + D L  +  +  L +S+  +  E A + A  
Sbjct: 105 FNG-LKFNISLTKLNISNNLIGQEETRVIFDALKFHNSLTALDISNNLMGKERAISNAFF 163

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK+N+ L  L + +N I     T + +AL  N ++R L+L+ N             LE  
Sbjct: 164 LKSNTSLTELNIASNKIGKEWTTVIFDALKFNKSLRVLNLSNN------------TLERE 211

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K++         I  + I A+   L S    L  LDI NN I  + A  +   +K  KSL
Sbjct: 212 KTI---------IVTKWITAIFYALKSNNS-LTTLDISNNLIGREEAIVIFNALKFNKSL 261

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +N+  N I  E  E   +ALK N ++  ++L  N I  K    I   LK  S +  LD
Sbjct: 262 TELNISYNLIEKEWIEAAFNALKFNNSLRVLNLSNNKIGEKEI-VITDTLKSGSPLNELD 320

Query: 450 LAYNPI 455
           +  N +
Sbjct: 321 ITNNSL 326



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 145/331 (43%), Gaps = 55/331 (16%)

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           +++  G    A++L   ST   L++ GN  G  GA  +    + + +L +L++  + IG 
Sbjct: 7   LLEKKGLKEKADSLKNGST--KLNIIGNKVGTWGAKEIIYIFKFD-NLTKLNITYSEIGK 63

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-------KNCKSLLWINLYMN 397
             +  + S L      L VL++ +N I  +       ++       K   SL  +N+  N
Sbjct: 64  RWLILIFSLLKFHDS-LRVLNLSDNIIKNEKVIVEKTWLPMIFNGLKFNISLTKLNISNN 122

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG E    I DALK + ++T +D+  N +  + A + A  LK N+ +T L++A N IG 
Sbjct: 123 LIGQEETRVIFDALKFHNSLTALDISNNLMGKERAISNAFFLKSNTSLTELNIASNKIGK 182

Query: 458 DGAKALSEVLKFHGNI-------NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           +    + + LKF+ ++       NTL+     I       +   L+ NN+++ LD+  N 
Sbjct: 183 EWTTVIFDALKFNKSLRVLNLSNNTLEREKTIIVTKWITAIFYALKSNNSLTTLDISNNL 242

Query: 511 L-RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF 569
           + R+E     N L F                                  N++LT +++++
Sbjct: 243 IGREEAIVIFNALKF----------------------------------NKSLTELNISY 268

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           N I  +   A   ALK N  + V  LNL+NN
Sbjct: 269 NLIEKEWIEAAFNALKFNNSLRV--LNLSNN 297



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 19/222 (8%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQ--TAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           + + +++S    G E    + ++L ++   TA ++S    G   A   AF   L+SN +L
Sbjct: 113 SLTKLNISNNLIGQEETRVIFDALKFHNSLTALDISNNLMGKERAISNAF--FLKSNTSL 170

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA-------KAIAELLKNN 273
             LN++ N IG E    + D L  N  +  L LS+  L  E          AI   LK+N
Sbjct: 171 TELNIASNKIGKEWTTVIFDALKFNKSLRVLNLSNNTLEREKTIIVTKWITAIFYALKSN 230

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L+++NN+I       +  AL  N ++  L+++ N        A    L+ N SLR
Sbjct: 231 NSLTTLDISNNLIGREEAIVIFNALKFNKSLTELNISYNLIEKEWIEAAFNALKFNNSLR 290

Query: 334 ELHLHGNSIGDEGI---RALMSGLSSRKGKLAVLDIGNNSIS 372
            L+L  N IG++ I     L SG       L  LDI NNS+ 
Sbjct: 291 VLNLSNNKIGEKEIVITDTLKSG-----SPLNELDITNNSLQ 327



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 7/137 (5%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG-------ITAAGIKA 209
           F K   + + ++++    G E    + ++L +N++   ++ + N        I    I A
Sbjct: 163 FLKSNTSLTELNIASNKIGKEWTTVIFDALKFNKSLRVLNLSNNTLEREKTIIVTKWITA 222

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L+SN +L TL++S N IG E    + + L  N  +  L +S   +  E  +A    
Sbjct: 223 IFYALKSNNSLTTLDISNNLIGREEAIVIFNALKFNKSLTELNISYNLIEKEWIEAAFNA 282

Query: 270 LKNNSILRVLELNNNMI 286
           LK N+ LRVL L+NN I
Sbjct: 283 LKFNNSLRVLNLSNNKI 299



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 27/199 (13%)

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           +  KG    A  LK+ S  T L++  N +G  GAK +  + KF  N+  L + + +IG  
Sbjct: 8   LEKKGLKEKADSLKNGS--TKLNIIGNKVGTWGAKEIIYIFKF-DNLTKLNITYSEIGKR 64

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDE--------VCSGCNGLSFFHSAIYSLKHMLFY 538
               +  +L++++++ +L+L  N +++E        +    NGL F         ++   
Sbjct: 65  WLILIFSLLKFHDSLRVLNLSDNIIKNEKVIVEKTWLPMIFNGLKF---------NISLT 115

Query: 539 SLCI-NYLQG---AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
            L I N L G    + +  + K  N +LT++D++ N +  + A + A  LK+N   ++T 
Sbjct: 116 KLNISNNLIGQEETRVIFDALKFHN-SLTALDISNNLMGKERAISNAFFLKSN--TSLTE 172

Query: 595 LNLANNFLTKFGQSALTDA 613
           LN+A+N + K   + + DA
Sbjct: 173 LNIASNKIGKEWTTVIFDA 191


>gi|399498014|emb|CCG20335.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKALHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIATKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKALHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIATKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIATKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     + +L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKALHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIATKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|399497870|emb|CCG20263.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG   + + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIVIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIVIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 11/309 (3%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN----G 311
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           + G  + ANAL    +   SL  L + GN I  E   A+ S +++++  LA L +G N +
Sbjct: 368 DEGAIVIANALK---DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENEL 423

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
             +GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G
Sbjct: 424 KDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEG 483

Query: 432 ASAIARVLK 440
              +  + K
Sbjct: 484 VDELKEIFK 492



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA  IA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIVIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIVIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSL 418


>gi|320170925|gb|EFW47824.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 670

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 98/178 (55%), Gaps = 4/178 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK--SLLW 391
           L L  N  G+ G +A+   L     KL  +D+ NN I   GA  +AE +K N K  SLL 
Sbjct: 2   LDLKWNETGEAGAQAIAEALKVNT-KLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLE 60

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
                   GD GA+ IA+ALK N T+  + LG N I + GA AIA VL  N+ +T+L L 
Sbjct: 61  KQSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLG 120

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            N IG  GA+A++E LK +  +  L L   QIG +GA+ +A+ L+ N  ++ L L  N
Sbjct: 121 VNQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLAEALKMNKNLTTLYLDQN 178



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 118/222 (53%), Gaps = 38/222 (17%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N+ G+ GA+ IA+ALK N  +TT+DL  N I   GA AIA  LK N+ +TSL   
Sbjct: 2   LDLKWNETGEAGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEK 61

Query: 452 YNPIGADG---AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            +   +DG   A+A++E LK +  +  L+LG  QIG  GA+ +A +L  N T++ L L  
Sbjct: 62  QSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLGV 121

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
           N + D                                 GA+ +A++ KV N  +T + L 
Sbjct: 122 NQIGD--------------------------------IGAQAIAEALKV-NTTMTRLYLD 148

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            N+I D GA  +A+ALK N++  +T+L L  NF+++ G +AL
Sbjct: 149 ENQIGDAGAQMLAEALKMNKN--LTTLYLDQNFISENGINAL 188



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 106/210 (50%), Gaps = 32/210 (15%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL---HLNGNYGGA 316
           + GA+AIAE LK N+ L  ++L NN+I   G  ++AEAL  N+ + SL          G 
Sbjct: 11  EAGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEKQSECESDGD 70

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            GA A+A+ L+ N +L+EL L  N IG+ G +A+            VL +          
Sbjct: 71  AGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIA----------VVLSVNT-------- 112

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                      +L  ++L +N IGD GA+ IA+ALK N T+T + L  N I   GA  +A
Sbjct: 113 -----------TLTTLSLGVNQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLA 161

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEV 466
             LK N  +T+L L  N I  +G  AL +V
Sbjct: 162 EALKMNKNLTTLYLDQNFISENGINALKQV 191



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 93/193 (48%), Gaps = 15/193 (7%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L +N+T E           AG +A    L+ N  L T++L  N IGD G   + + L  N
Sbjct: 4   LKWNETGE-----------AGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVN 52

Query: 246 AGVERLQLSSVDLR---DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
             +  L     +     D GA+AIAE LK N+ L+ L L  N I   G  ++A  L  N+
Sbjct: 53  TKLTSLLEKQSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNT 112

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+ +L L  N  G +GA A+A+ L+ N ++  L+L  N IGD G + L   L   K  L 
Sbjct: 113 TLTTLSLGVNQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLAEALKMNKN-LT 171

Query: 363 VLDIGNNSISAKG 375
            L +  N IS  G
Sbjct: 172 TLYLDQNFISENG 184



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 91/187 (48%), Gaps = 3/187 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL--- 223
           +D+     G+ G   +AE+L  N     V    N I   G  A    L+ N  L +L   
Sbjct: 2   LDLKWNETGEAGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEK 61

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
                  GD G + + + L  N  ++ L+L    + + GA+AIA +L  N+ L  L L  
Sbjct: 62  QSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLGV 121

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++AEAL  N+T+  L+L+ N  G  GA  LA+ L+ NK+L  L+L  N I 
Sbjct: 122 NQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLAEALKMNKNLTTLYLDQNFIS 181

Query: 344 DEGIRAL 350
           + GI AL
Sbjct: 182 ENGINAL 188



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 9/187 (4%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-----AEEVSFAANGITAAG 206
           Q + E  K     ++VD+     GD G   +AE+L  N        ++    ++G   AG
Sbjct: 15  QAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEKQSECESDG--DAG 72

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +A    L+ N  LK L L  N IG+ G + +  +L  N  +  L L    + D GA+AI
Sbjct: 73  AQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLGVNQIGDIGAQAI 132

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE LK N+ +  L L+ N I  +G   LAEAL  N  + +L+L+ N+    G NAL +  
Sbjct: 133 AEALKVNTTMTRLYLDENQIGDAGAQMLAEALKMNKNLTTLYLDQNFISENGINALKQ-- 190

Query: 327 EGNKSLR 333
            GN++ +
Sbjct: 191 VGNRTCK 197



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 38/197 (19%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL--K 477
           +DL  N     GA AIA  LK N+ +T++DL  N IG  GA A++E LK +  + +L  K
Sbjct: 2   LDLKWNETGEAGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEK 61

Query: 478 LGWCQI-GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
              C+  G +GA+ +A+ L+ N T+  L L  N + +                       
Sbjct: 62  QSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNV---------------------- 99

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                     GA+ +A    V N  LT++ L  N+I D GA AIA+ALK N    +T L 
Sbjct: 100 ----------GAQAIAVVLSV-NTTLTTLSLGVNQIGDIGAQAIAEALKVN--TTMTRLY 146

Query: 597 LANNFLTKFGQSALTDA 613
           L  N +   G   L +A
Sbjct: 147 LDENQIGDAGAQMLAEA 163


>gi|241116834|ref|XP_002401630.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215493174|gb|EEC02815.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 383

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 187/389 (48%), Gaps = 70/389 (17%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N IGD G   L   L   + +  L L+S D+  +G +++A  LK+  I  +L L 
Sbjct: 36  LDLSNNHIGDSGAVALASGL-KGSKIISLNLTSNDIEQKGVQSLANSLKDTEI-TILNLC 93

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  +LA +L +NS I +L L GN  G  G + LA+ L+G + L  L LH N I
Sbjct: 94  ANKIGQTGAITLANSL-KNSQITNLELGGNRIGDHGIHILAQNLKGTQ-LTYLGLHYNDI 151

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK------------------ 384
           G+EG++AL+ G+  +  K+  L + +N I  + +  +A  +K                  
Sbjct: 152 GNEGVQALIHGI--QDTKIINLKLSSNHIWYEESETLARSLKHTHITHLSLAGSIGRGVL 209

Query: 385 -----NCKSLLWINLYMN---DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                N      INL ++    I  +  + +A  LK N  IT ++   N +  +GA A++
Sbjct: 210 KVISENLVGTQIINLDLSCNRSITSKDMKFLAKDLK-NTKITELNFYNNRMGEEGAIALS 268

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             LKD + IT+LDL+YN IG +G KAL+ VL    NI +L L   ++   GA+ +A +L 
Sbjct: 269 EGLKD-TQITNLDLSYNRIGIEGTKALANVLD-KTNIMSLNLRKSRMEDDGAKALAVVLP 326

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
            N  I  L+L  + + DE                                G + LA+S +
Sbjct: 327 -NTKIKYLNLYKSLIGDE--------------------------------GIRALAESLE 353

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALK 585
             N  +T+++L  N I   GA A+A+ LK
Sbjct: 354 --NTQITNLNLGLNSIDQAGAMALAKGLK 380



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 35/301 (11%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++     G  G   LA SL  +Q    +    N I   GI      L+    L  L L 
Sbjct: 90  LNLCANKIGQTGAITLANSLKNSQITN-LELGGNRIGDHGIHILAQNLKGT-QLTYLGLH 147

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI----------- 275
            N IG+EGV+ L   + D   +  L+LSS  +  E ++ +A  LK+  I           
Sbjct: 148 YNDIGNEGVQALIHGIQDTK-IINLKLSSNHIWYEESETLARSLKHTHITHLSLAGSIGR 206

Query: 276 --LRVLELN-------------NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
             L+V+  N             N  I       LA+ L +N+ I  L+   N  G  GA 
Sbjct: 207 GVLKVISENLVGTQIINLDLSCNRSITSKDMKFLAKDL-KNTKITELNFYNNRMGEEGAI 265

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           AL++GL+ +  +  L L  N IG EG +AL + L   K  +  L++  + +   GA  +A
Sbjct: 266 ALSEGLK-DTQITNLDLSYNRIGIEGTKALANVLD--KTNIMSLNLRKSRMEDDGAKALA 322

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             + N K + ++NLY + IGDEG   +A++L +N  IT ++LG N+I   GA A+A+ LK
Sbjct: 323 VVLPNTK-IKYLNLYKSLIGDEGIRALAESL-ENTQITNLNLGLNSIDQAGAMALAKGLK 380

Query: 441 D 441
           +
Sbjct: 381 N 381



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 6/163 (3%)

Query: 166 SVDMS-GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           ++D+S  R+   + + FLA+ L  N    E++F  N +   G  A    L+ +  +  L+
Sbjct: 223 NLDLSCNRSITSKDMKFLAKDL-KNTKITELNFYNNRMGEEGAIALSEGLK-DTQITNLD 280

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N IG EG K L ++L D   +  L L    + D+GAKA+A +L N  I + L L  +
Sbjct: 281 LSYNRIGIEGTKALANVL-DKTNIMSLNLRKSRMEDDGAKALAVVLPNTKI-KYLNLYKS 338

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           +I   G  +LAE+L EN+ I +L+L  N     GA ALAKGL+
Sbjct: 339 LIGDEGIRALAESL-ENTQITNLNLGLNSIDQAGAMALAKGLK 380



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 40/198 (20%)

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +N  IT + L    +  +    +A+VLKD + I  LDL+ N IG  GA AL+  LK    
Sbjct: 2   KNTKITHLSLHAYKMKKEIMPFLAQVLKD-TQIAHLDLSNNHIGDSGAVALASGLKG-SK 59

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
           I +L L    I   G + +A+ L+ +  I+IL+L AN +                     
Sbjct: 60  IISLNLTSNDIEQKGVQSLANSLK-DTEITILNLCANKIGQ------------------- 99

Query: 533 KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
                         GA  LA S K  N  +T+++L  N I D G   +AQ LK  +   +
Sbjct: 100 -------------TGAITLANSLK--NSQITNLELGGNRIGDHGIHILAQNLKGTQ---L 141

Query: 593 TSLNLANNFLTKFGQSAL 610
           T L L  N +   G  AL
Sbjct: 142 TYLGLHYNDIGNEGVQAL 159


>gi|395839413|ref|XP_003792584.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
            domain-containing protein 2 [Otolemur garnettii]
          Length = 1039

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 4/272 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    V  L+L+   +      A+A +L++      L+L+ N +   G   L   L   S
Sbjct: 758  VRRLKVGHLKLTFCGVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---S 814

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 815  VCKALYLRDNNISDRGICTLVERAVRCEPLQKLALFNNKLTDGCAHSMAKLLACKRNFLA 874

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN I+A GA  +AE ++   SL ++ L+ N +GDEGA  +A+AL  ++++  + L
Sbjct: 875  -LRLGNNHITAAGAQMLAEGLRANTSLQFLGLWGNRVGDEGARALAEALSDHQSLKWLSL 933

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L+ N+ +  L L  N +  +G  +L+E LK + ++  LKL    
Sbjct: 934  VGNNIGSVGAHALAHMLEKNTTLEELCLEENHLQDEGVCSLAEALKRNSSLRVLKLSNNC 993

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +   GAE +   L  N+TI  + LR N    E
Sbjct: 994  VTYLGAEALLQALARNDTILEVWLRGNTFSGE 1025



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 123/265 (46%), Gaps = 4/265 (1%)

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
            G+  A   A   VLQ       L L  N +GD GV+ L   L   +  + L L   ++ D
Sbjct: 772  GVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---SVCKALYLRDNNISD 828

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
             G   + E       L+ L L NN +      S+A+ L       +L L  N+  A GA 
Sbjct: 829  RGICTLVERAVRCEPLQKLALFNNKLTDGCAHSMAKLLACKRNFLALRLGNNHITAAGAQ 888

Query: 321  ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
             LA+GL  N SL+ L L GN +GDEG RAL   LS  +  L  L +  N+I + GA  +A
Sbjct: 889  MLAEGLRANTSLQFLGLWGNRVGDEGARALAEALSDHQS-LKWLSLVGNNIGSVGAHALA 947

Query: 381  EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
              ++   +L  + L  N + DEG   +A+ALK+N ++  + L  N +   GA A+ + L 
Sbjct: 948  HMLEKNTTLEELCLEENHLQDEGVCSLAEALKRNSSLRVLKLSNNCVTYLGAEALLQALA 1007

Query: 441  DNSVITSLDLAYNPIGADGAKALSE 465
             N  I  + L  N    +  + LS 
Sbjct: 1008 RNDTILEVWLRGNTFSGEEIETLSH 1032



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 4/162 (2%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N ITAAG +     L++N +L+ L L GN +GDEG + L + L D+  ++ L L   ++ 
Sbjct: 880  NHITAAGAQMLAEGLRANTSLQFLGLWGNRVGDEGARALAEALSDHQSLKWLSLVGNNIG 939

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
              GA A+A +L+ N+ L  L L  N +   G  SLAEAL  NS++R L L+ N    LGA
Sbjct: 940  SVGAHALAHMLEKNTTLEELCLEENHLQDEGVCSLAEALKRNSSLRVLKLSNNCVTYLGA 999

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             AL + L  N ++ E+ L GN+   E I      LS R G+L
Sbjct: 1000 EALLQALARNDTILEVWLRGNTFSGEEIET----LSHRDGRL 1037



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 86/174 (49%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     R F ++ +   +    G   LAE L  N + + +   
Sbjct: 847  LALFNNKLTDGCAHSMAKLLACKRNFLALRLGNNHITAAGAQMLAEGLRANTSLQFLGLW 906

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +LK L+L GN IG  G   L  +L  N  +E L L    L
Sbjct: 907  GNRVGDEGARALAEALSDHQSLKWLSLVGNNIGSVGAHALAHMLEKNTTLEELCLEENHL 966

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG  ++AE LK NS LRVL+L+NN + Y G  +L +AL  N TI  + L GN
Sbjct: 967  QDEGVCSLAEALKRNSSLRVLKLSNNCVTYLGAEALLQALARNDTILEVWLRGN 1020



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 25/286 (8%)

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL E+      +  E +R L  G      KL    +G    +A     +A  +++ +  
Sbjct: 743  RSLYEMQ--EERLAREAVRRLKVG----HLKLTFCGVGPAECAA-----LAFVLQHLRRP 791

Query: 390  LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
            + + L  N +GD G E++   L   + +   D   NNI  +G   +         +  L 
Sbjct: 792  VALQLDYNSVGDIGVEQLLPCLSVCKALYLRD---NNISDRGICTLVERAVRCEPLQKLA 848

Query: 450  LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            L  N +    A +++++L    N   L+LG   I A+GA+ +A+ LR N ++  L L  N
Sbjct: 849  LFNNKLTDGCAHSMAKLLACKRNFLALRLGNNHITAAGAQMLAEGLRANTSLQFLGLWGN 908

Query: 510  GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDL 567
             + DE   G   L+   S   SLK   + SL  N +   GA  LA   +  N  L  + L
Sbjct: 909  RVGDE---GARALAEALSDHQSLK---WLSLVGNNIGSVGAHALAHMLEK-NTTLEELCL 961

Query: 568  AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              N ++D+G  ++A+ALK N  + V  L L+NN +T  G  AL  A
Sbjct: 962  EENHLQDEGVCSLAEALKRNSSLRV--LKLSNNCVTYLGAEALLQA 1005



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 89/197 (45%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E     +  ++++   N +T     +   +L        L L  N I  
Sbjct: 825  NISDRGICTLVERAVRCEPLQKLALFNNKLTDGCAHSMAKLLACKRNFLALRLGNNHITA 884

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  N  ++ L L    + DEGA+A+AE L ++  L+ L L  N I   G  
Sbjct: 885  AGAQMLAEGLRANTSLQFLGLWGNRVGDEGARALAEALSDHQSLKWLSLVGNNIGSVGAH 944

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N+T+  L L  N+    G  +LA+ L+ N SLR L L  N +   G  AL+ 
Sbjct: 945  ALAHMLEKNTTLEELCLEENHLQDEGVCSLAEALKRNSSLRVLKLSNNCVTYLGAEALLQ 1004

Query: 353  GLSSRKGKLAVLDIGNN 369
             L+     L V   GN 
Sbjct: 1005 ALARNDTILEVWLRGNT 1021


>gi|320167855|gb|EFW44754.1| hypothetical protein CAOG_02779 [Capsaspora owczarzaki ATCC 30864]
          Length = 983

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 3/274 (1%)

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           ++L     ++ +    V+LRDE  + + + L     L  L L++N I   GF ++   L 
Sbjct: 228 ELLFRAGDIKSISFEGVNLRDEIMQPLVKSLLLKRSLESLNLSHNPIKLPGFDAVGFLLR 287

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE-GIRALMSGLSSRK 358
             + ++ L+L+     A  AN+L   L     L  L L    + +   + A+  G+  R 
Sbjct: 288 RGAQLKHLNLSAISIDAKCANSLGVSLLTCIGLESLVLQNCGLKNSVSLEAICEGVR-RN 346

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
             + +LD+ +N I  KGA  VA  ++   +LL + L  N I D GAE IAD+L  NRT+ 
Sbjct: 347 HTVRLLDLQSNGIGPKGAKVVAHMVQKNDTLLCLRLGGNPIQDHGAEFIADSLSVNRTLQ 406

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG-ADGAKALSEVLKFHGNINTLK 477
            ++L G +I   G +A+A+VL  NS + +++L YN +G ADG + L + L  +  +  L 
Sbjct: 407 KMELWGCSIQLPGLTALAQVLTKNSPLEAINLGYNALGNADGMETLCKALISNKYLRELI 466

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           L    + +  A  +A  L  N  +++LD+R N L
Sbjct: 467 LASTGMQSESAVALAGALAENKHLAVLDIRHNDL 500



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 31/312 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+   G N  DE +  L +SL   ++ E ++ + N I   G  A   +L+    LK L
Sbjct: 236 IKSISFEGVNLRDEIMQPLVKSLLLKRSLESLNLSHNPIKLPGFDAVGFLLRRGAQLKHL 295

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA-KAIAELLKNNSILRVLELN 282
           NLS   I  +    L   L+   G+E L L +  L++  + +AI E ++ N  +R+L+L 
Sbjct: 296 NLSAISIDAKCANSLGVSLLTCIGLESLVLQNCGLKNSVSLEAICEGVRRNHTVRLLDLQ 355

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G   +A  + +N T+  L L GN     GA  +A  L  N++L+++ L G SI
Sbjct: 356 SNGIGPKGAKVVAHMVQKNDTLLCLRLGGNPIQDHGAEFIADSLSVNRTLQKMELWGCSI 415

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD- 401
              G+ AL                             A+ +     L  INL  N +G+ 
Sbjct: 416 QLPGLTAL-----------------------------AQVLTKNSPLEAINLGYNALGNA 446

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G E +  AL  N+ +  + L    + S+ A A+A  L +N  +  LD+ +N +G  G  
Sbjct: 447 DGMETLCKALISNKYLRELILASTGMQSESAVALAGALAENKHLAVLDIRHNDLGQGGLI 506

Query: 462 ALSEVLKFHGNI 473
           ALS  ++ + ++
Sbjct: 507 ALSVAMRLNRSV 518



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 4/200 (2%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++ N  ++ L+L  N IG +G K +  ++  N  +  L+L    ++D GA+ IA+ L  N
Sbjct: 343 VRRNHTVRLLDLQSNGIGPKGAKVVAHMVQKNDTLLCLRLGGNPIQDHGAEFIADSLSVN 402

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGANALAKGLEGNKSL 332
             L+ +EL    I   G T+LA+ L +NS + +++L  N  G A G   L K L  NK L
Sbjct: 403 RTLQKMELWGCSIQLPGLTALAQVLTKNSPLEAINLGYNALGNADGMETLCKALISNKYL 462

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG--AFHVAEYIKNCKSLL 390
           REL L    +  E   AL   L+  K  LAVLDI +N +   G  A  VA  +      L
Sbjct: 463 RELILASTGMQSESAVALAGALAENK-HLAVLDIRHNDLGQGGLIALSVAMRLNRSVIQL 521

Query: 391 WINLYMNDIGDEGAEKIADA 410
           + ++    +G+     I D 
Sbjct: 522 FFDMAKPIVGNPPHSAIPDP 541



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 29/186 (15%)

Query: 179 LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL 238
           L  + E +  N T   +   +NGI   G K    ++Q N  L  L L GNPI D G + +
Sbjct: 336 LEAICEGVRRNHTVRLLDLQSNGIGPKGAKVVAHMVQKNDTLLCLRLGGNPIQDHGAEFI 395

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN-------------- 284
            D L  N  +++++L    ++  G  A+A++L  NS L  + L  N              
Sbjct: 396 ADSLSVNRTLQKMELWGCSIQLPGLTALAQVLTKNSPLEAINLGYNALGNADGMETLCKA 455

Query: 285 ----------MIDYSGFTS-----LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
                     ++  +G  S     LA AL EN  +  L +  N  G  G  AL+  +  N
Sbjct: 456 LISNKYLRELILASTGMQSESAVALAGALAENKHLAVLDIRHNDLGQGGLIALSVAMRLN 515

Query: 330 KSLREL 335
           +S+ +L
Sbjct: 516 RSVIQL 521



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 35/221 (15%)

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           ++ DE  + +  +L   R++ +++L  N I   G  A+  +L+  + +  L+L+   I A
Sbjct: 245 NLRDEIMQPLVKSLLLKRSLESLNLSHNPIKLPGFDAVGFLLRRGAQLKHLNLSAISIDA 304

Query: 458 DGAKAL-----------SEVLKFHGNINTLKL-GWCQ-----------------IGASGA 488
             A +L           S VL+  G  N++ L   C+                 IG  GA
Sbjct: 305 KCANSLGVSLLTCIGLESLVLQNCGLKNSVSLEAICEGVRRNHTVRLLDLQSNGIGPKGA 364

Query: 489 EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
           + VA M++ N+T+  L L  N ++D    G   ++   S   +L+ M  +  C   L G 
Sbjct: 365 KVVAHMVQKNDTLLCLRLGGNPIQDH---GAEFIADSLSVNRTLQKMELWG-CSIQLPGL 420

Query: 549 KCLAQSFKVVNEALTSIDLAFNEIRD-DGAFAIAQALKANE 588
             LAQ     N  L +I+L +N + + DG   + +AL +N+
Sbjct: 421 TALAQVL-TKNSPLEAINLGYNALGNADGMETLCKALISNK 460


>gi|399498114|emb|CCG20385.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 149/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|443707721|gb|ELU03190.1| hypothetical protein CAPTEDRAFT_107434 [Capitella teleta]
          Length = 330

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 153/316 (48%), Gaps = 31/316 (9%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           + F   G+TAA        L  N+   +L +  + +G +G K L   L +N   E + LS
Sbjct: 1   MKFLFTGLTAASF------LVRNLGEGSLKMRHHYLGGQGTKPLAVALKENTVCEEIDLS 54

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +  +GA A+A++LK N  +  L ++NN +   G  + AE L  N+T+++L L GN  
Sbjct: 55  DNYVEGDGASALAKMLKENMFIVNLNISNNFMRSIGAHAFAEMLEVNTTLKTLSLQGNQL 114

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
               A  L++ L  N SL  L L  N+ G+ G   L +G++   G LA +D+  N I  K
Sbjct: 115 SDNDALRLSEALRANMSLSVLDLSHNNFGELGGVYLGNGIAGNIG-LADIDLSWNGIREK 173

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++   SL  ++L  N +G  G   IA AL+ N+++  +D+  N + ++    
Sbjct: 174 GALSIAKALQKNSSLETLDLSWNGLGHTGGIAIAQALRVNKSLRVLDISNNRLTTEAGKK 233

Query: 435 IARVLKDN----SVITSLDLAY-------------NPIGADGAKAL------SEVLKFHG 471
           + + +  N    +++ S+D+ +             NPIG +G  A+      +  LK  G
Sbjct: 234 LGQAIGKNEALETLLVSIDMMHCSLLITCNYQMGMNPIGYEGVDAMLKGVATNPSLKLIG 293

Query: 472 NINTLKLGWCQIGASG 487
            I   +  + Q G SG
Sbjct: 294 -IEVSQTAFTQTGTSG 308



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 121/217 (55%), Gaps = 16/217 (7%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G +G + +A ALK+N     IDL  N +   GASA+A++LK+N  I +L+++ N + + 
Sbjct: 30  LGGQGTKPLAVALKENTVCEEIDLSDNYVEGDGASALAKMLKENMFIVNLNISNNFMRSI 89

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA A +E+L+ +  + TL L   Q+  + A  +++ LR N ++S+LDL  N        G
Sbjct: 90  GAHAFAEMLEVNTTLKTLSLQGNQLSDNDALRLSEALRANMSLSVLDLSHNNF------G 143

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
             G  +  + I     +    L  N +  +GA  +A++ +  N +L ++DL++N +   G
Sbjct: 144 ELGGVYLGNGIAGNIGLADIDLSWNGIREKGALSIAKALQK-NSSLETLDLSWNGLGHTG 202

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLT-----KFGQS 608
             AIAQAL+ N+ + V  L+++NN LT     K GQ+
Sbjct: 203 GIAIAQALRVNKSLRV--LDISNNRLTTEAGKKLGQA 237



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 2/227 (0%)

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
           ++G T+ A  L+ N    SL +  +Y G  G   LA  L+ N    E+ L  N +  +G 
Sbjct: 5   FTGLTA-ASFLVRNLGEGSLKMRHHYLGGQGTKPLAVALKENTVCEEIDLSDNYVEGDGA 63

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            AL   L      +  L+I NN + + GA   AE ++   +L  ++L  N + D  A ++
Sbjct: 64  SALAKMLKENM-FIVNLNISNNFMRSIGAHAFAEMLEVNTTLKTLSLQGNQLSDNDALRL 122

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           ++AL+ N +++ +DL  NN    G   +   +  N  +  +DL++N I   GA ++++ L
Sbjct: 123 SEALRANMSLSVLDLSHNNFGELGGVYLGNGIAGNIGLADIDLSWNGIREKGALSIAKAL 182

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           + + ++ TL L W  +G +G   +A  LR N ++ +LD+  N L  E
Sbjct: 183 QKNSSLETLDLSWNGLGHTGGIAIAQALRVNKSLRVLDISNNRLTTE 229



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 120/274 (43%), Gaps = 18/274 (6%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+ M     G +G   LA +L  N   EE+  + N +   G  A   +L+ N+ +  LN+
Sbjct: 22  SLKMRHHYLGGQGTKPLAVALKENTVCEEIDLSDNYVEGDGASALAKMLKENMFIVNLNI 81

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N +   G     ++L  N  ++ L L    L D  A  ++E L+ N  L VL+L++N 
Sbjct: 82  SNNFMRSIGAHAFAEMLEVNTTLKTLSLQGNQLSDNDALRLSEALRANMSLSVLDLSHNN 141

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L   +  N  +  + L+ N     GA ++AK L+ N SL  L L  N +G  
Sbjct: 142 FGELGGVYLGNGIAGNIGLADIDLSWNGIREKGALSIAKALQKNSSLETLDLSWNGLGHT 201

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI---------------KNCKSLL 390
           G  A+   L   K  L VLDI NN ++ +    + + I                +C  L+
Sbjct: 202 GGIAIAQALRVNK-SLRVLDISNNRLTTEAGKKLGQAIGKNEALETLLVSIDMMHCSLLI 260

Query: 391 WIN--LYMNDIGDEGAEKIADALKQNRTITTIDL 422
             N  + MN IG EG + +   +  N ++  I +
Sbjct: 261 TCNYQMGMNPIGYEGVDAMLKGVATNPSLKLIGI 294



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 18/223 (8%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G    AE L  N T + +S   N ++          L++N++L  L+LS N  G+ G   
Sbjct: 90  GAHAFAEMLEVNTTLKTLSLQGNQLSDNDALRLSEALRANMSLSVLDLSHNNFGELGGVY 149

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L + +  N G+  + LS   +R++GA +IA+ L+ NS L  L+L+ N + ++G  ++A+A
Sbjct: 150 LGNGIAGNIGLADIDLSWNGIREKGALSIAKALQKNSSLETLDLSWNGLGHTGGIAIAQA 209

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL-----------------HLHGN 340
           L  N ++R L ++ N         L + +  N++L  L                  +  N
Sbjct: 210 LRVNKSLRVLDISNNRLTTEAGKKLGQAIGKNEALETLLVSIDMMHCSLLITCNYQMGMN 269

Query: 341 SIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKGAFHVAEY 382
            IG EG+ A++ G+++    KL  +++   + +  G      Y
Sbjct: 270 PIGYEGVDAMLKGVATNPSLKLIGIEVSQTAFTQTGTSGQTPY 312


>gi|405976905|gb|EKC41383.1| hypothetical protein CGI_10025655 [Crassostrea gigas]
          Length = 554

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 29/265 (10%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +S   +G+ + G++A    L SN ++ TL+LS N +G  G   +C++L DN  +  L LS
Sbjct: 140 LSMKHHGLGSQGMRAIAMSLVSNTSVLTLDLSDNWLGHPGGHAVCEMLRDNCFITHLDLS 199

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
                 + A+++++ L+ NS L  + L+ N  D       ++A++  + +  L+L+ N  
Sbjct: 200 DNKFGLQTAESLSQTLQQNSTLTHVTLSGNDFDDKAAVHFSDAIMNTTKLEYLNLSHNLF 259

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L   +  N SL+EL L                               NSI  K
Sbjct: 260 GENAGIILGPAIADNSSLKELDLSW-----------------------------NSIRRK 290

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ IKN   +  INL  N  G EG+    DALK N+ +  +DL  N I S+GA  
Sbjct: 291 GAVAIAQGIKNNVYMKKINLAWNGFGLEGSIAFGDALKGNQVLEELDLTNNRITSEGAVL 350

Query: 435 IARVLKDNSVITSLDLAYNPIGADG 459
           I + +  N  +T++ L  NP+   G
Sbjct: 351 IGKGVSVNETLTTIRLGRNPMQTAG 375



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 39/320 (12%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L +    L  +G +AIA  L +N+ +  L+L++N + + G  ++ E L +N  I  L L
Sbjct: 139 HLSMKHHGLGSQGMRAIAMSLVSNTSVLTLDLSDNWLGHPGGHAVCEMLRDNCFITHLDL 198

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G   A +L++ L+ N +L  + L GN   D                         
Sbjct: 199 SDNKFGLQTAESLSQTLQQNSTLTHVTLSGNDFDD------------------------- 233

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
               K A H ++ I N   L ++NL  N  G+     +  A+  N ++  +DL  N+I  
Sbjct: 234 ----KAAVHFSDAIMNTTKLEYLNLSHNLFGENAGIILGPAIADNSSLKELDLSWNSIRR 289

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           KGA AIA+ +K+N  +  ++LA+N  G +G+ A  + LK +  +  L L   +I + GA 
Sbjct: 290 KGAVAIAQGIKNNVYMKKINLAWNGFGLEGSIAFGDALKGNQVLEELDLTNNRITSEGAV 349

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGL--SFFHSAIYSLKHMLFYSLCINYLQG 547
            +   +  N T++ + L  N ++    +GC G+  +   +   +LK + F  + +N    
Sbjct: 350 LIGKGVSVNETLTTIRLGRNPMQ---TAGCYGICAAILRNPNCALKELDFKDILVN---- 402

Query: 548 AKCLAQSFKVVNEALTSIDL 567
            K     FK V E +  I +
Sbjct: 403 -KDFDDIFKQVQEQVPDIKM 421



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 1/246 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     G +G+  +A SL  N +   +  + N +   G  A   +L+ N  +  L+LS N
Sbjct: 142 MKHHGLGSQGMRAIAMSLVSNTSVLTLDLSDNWLGHPGGHAVCEMLRDNCFITHLDLSDN 201

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
             G +  + L   L  N+ +  + LS  D  D+ A   ++ + N + L  L L++N+   
Sbjct: 202 KFGLQTAESLSQTLQQNSTLTHVTLSGNDFDDKAAVHFSDAIMNTTKLEYLNLSHNLFGE 261

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +    L  A+ +NS+++ L L+ N     GA A+A+G++ N  +++++L  N  G EG  
Sbjct: 262 NAGIILGPAIADNSSLKELDLSWNSIRRKGAVAIAQGIKNNVYMKKINLAWNGFGLEGSI 321

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A    L   +  L  LD+ NN I+++GA  + + +   ++L  I L  N +   G   I 
Sbjct: 322 AFGDALKGNQ-VLEELDLTNNRITSEGAVLIGKGVSVNETLTTIRLGRNPMQTAGCYGIC 380

Query: 409 DALKQN 414
            A+ +N
Sbjct: 381 AAILRN 386



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 36/272 (13%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +  + +G +G+RA+   L S    L  LD+ +N +   G   V E +++   +  ++L
Sbjct: 140 LSMKHHGLGSQGMRAIAMSLVSNTSVL-TLDLSDNWLGHPGGHAVCEMLRDNCFITHLDL 198

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N  G + AE ++  L+QN T+T + L GN+   K A   +  + + + +  L+L++N 
Sbjct: 199 SDNKFGLQTAESLSQTLQQNSTLTHVTLSGNDFDDKAAVHFSDAIMNTTKLEYLNLSHNL 258

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            G +    L   +  + ++  L L W  I   GA  +A  ++ N  +  ++L  NG    
Sbjct: 259 FGENAGIILGPAIADNSSLKELDLSWNSIRRKGAVAIAQGIKNNVYMKKINLAWNGF--- 315

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
              G  G   F  A                L+G           N+ L  +DL  N I  
Sbjct: 316 ---GLEGSIAFGDA----------------LKG-----------NQVLEELDLTNNRITS 345

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           +GA  I + +  NE   +T++ L  N +   G
Sbjct: 346 EGAVLIGKGVSVNE--TLTTIRLGRNPMQTAG 375



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 51/247 (20%)

Query: 382 YIKNCKSL-----LWINLYMND---------IGDEGAEKIADALKQNRTITTIDLGGNNI 427
           YI+ CK +      +   +MND         +G +G   IA +L  N ++ T+DL  N +
Sbjct: 116 YIEGCKKVGVVPASYFLRHMNDPHLSMKHHGLGSQGMRAIAMSLVSNTSVLTLDLSDNWL 175

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              G  A+  +L+DN  IT LDL+ N  G   A++LS+ L+                   
Sbjct: 176 GHPGGHAVCEMLRDNCFITHLDLSDNKFGLQTAESLSQTLQ------------------- 216

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-Q 546
                     N+T++ + L  N   D+          F  AI +   + + +L  N   +
Sbjct: 217 ---------QNSTLTHVTLSGNDFDDKAAV------HFSDAIMNTTKLEYLNLSHNLFGE 261

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            A  +       N +L  +DL++N IR  GA AIAQ +K N  V +  +NLA N     G
Sbjct: 262 NAGIILGPAIADNSSLKELDLSWNSIRRKGAVAIAQGIKNN--VYMKKINLAWNGFGLEG 319

Query: 607 QSALTDA 613
             A  DA
Sbjct: 320 SIAFGDA 326



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 10/253 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++D+S    G  G   + E L  N     +  + N       ++    LQ N  L  + L
Sbjct: 167 TLDLSDNWLGHPGGHAVCEMLRDNCFITHLDLSDNKFGLQTAESLSQTLQQNSTLTHVTL 226

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           SGN   D+      D +++   +E L LS     +     +   + +NS L+ L+L+ N 
Sbjct: 227 SGNDFDDKAAVHFSDAIMNTTKLEYLNLSHNLFGENAGIILGPAIADNSSLKELDLSWNS 286

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G  ++A+ +  N  ++ ++L  N  G  G+ A    L+GN+ L EL L  N I  E
Sbjct: 287 IRRKGAVAIAQGIKNNVYMKKINLAWNGFGLEGSIAFGDALKGNQVLEELDLTNNRITSE 346

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI---KNC--KSL----LWINLYM 396
           G   +  G+S  +  L  + +G N +   G + +   I    NC  K L    + +N   
Sbjct: 347 GAVLIGKGVSVNE-TLTTIRLGRNPMQTAGCYGICAAILRNPNCALKELDFKDILVNKDF 405

Query: 397 NDIGDEGAEKIAD 409
           +DI  +  E++ D
Sbjct: 406 DDIFKQVQEQVPD 418


>gi|297695585|ref|XP_002825012.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Pongo abelii]
          Length = 471

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    NS+ + SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLAKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+E A  + + L+ N  +  +D+ GN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 139/285 (48%), Gaps = 4/285 (1%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  ++ + +S
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNIS 152

Query: 255 SVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L L+ N 
Sbjct: 153 NNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKLDLSHNQ 212

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              +G   L + L  N  L  L L  N+    G  AL +GL      LA LD+  N +  
Sbjct: 213 FSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLAKLDLSMNGLGN 271

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I+  GA 
Sbjct: 272 EVALALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGAI 331

Query: 434 AIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
            +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 332 LLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 376



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 118/228 (51%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S  G  H+ 
Sbjct: 164 ISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNY-RIKKLDLSHNQFSDVGGEHLG 222

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N+    GA  + + L+ N T+  +DL  N + ++ A A+  VL+
Sbjct: 223 QMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLAKLDLSMNGLGNEVALALGEVLR 282

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD++ N IG +GA  +S+ L+ + ++  LKL    I   GA
Sbjct: 283 LNSCLVYLDISGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGA 330



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 137/280 (48%), Gaps = 25/280 (8%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E ++    L  +N+
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNTA-VTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNI 151

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +G EGA  I+D  ++N + + +++L GN+   + A+ + + L  N  I  LDL++N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKLDLSHN 211

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  NGL +
Sbjct: 212 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLAKLDLSMNGLGN 271

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
           EV               +L  +L  + C+ YL         +GA  +++  +  NE+L  
Sbjct: 272 EVA-------------LALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLES-NESLRV 317

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           + L  N I  DGA  +  A+K N    +  L+++N  +++
Sbjct: 318 LKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE-EVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 ESAALLGQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +      +L E L  NS +  L ++GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLAKLDLSMNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N  +T ++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ +S+  + + + + +L+L         A  +  
Sbjct: 136 LVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQ 195

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  I  LDL  N   D                                 G + L Q
Sbjct: 196 ALSTNYRIKKLDLSHNQFSD--------------------------------VGGEHLGQ 223

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
               +N  LTS+DL++N     GA A+   L+ N  V +  L+L+ N L
Sbjct: 224 ML-AINVGLTSLDLSWNNFHTRGAVALCNGLRGN--VTLAKLDLSMNGL 269


>gi|399497908|emb|CCG20282.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVGELKEIFK 492



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 151/305 (49%), Gaps = 15/305 (4%)

Query: 312 NYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N   AL   N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ 
Sbjct: 196 NEAAALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDG 253

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS + A  V+E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+
Sbjct: 254 ISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSE 313

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G S +   L   S +  LDL  N  G +    L + L  H N+  + L +  +   GA  
Sbjct: 314 GGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIA 373

Query: 491 VADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QG 547
           +A+ L+ +  ++++L++  N +  E            S I + + +   SL  N L  +G
Sbjct: 374 IANALKDSAPSLAVLEMAGNDITAEAAPA------IASCIAAKQLLAKLSLGENELKDEG 427

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           A  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G 
Sbjct: 428 AIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGV 484

Query: 608 SALTD 612
             L +
Sbjct: 485 GELKE 489



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 2/275 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    G++G+    + L      EE+    +GI+     A   ++ S   LK L+  
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GDEG   + +I+  +  +E  + SS  +  EG   + E L   S L+ L+L +NM 
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHLHGNSIGDE 345
                  L +AL+++  +  ++L+       GA A+A  L+ +  SL  L + GN I  E
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              A+ S +++++  LA L +G N +  +GA  +A+ ++    L+ +++  N +   GA 
Sbjct: 399 AAPAIASCIAAKQ-LLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGAR 457

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +A  +        +++ GN I  +G   +  + K
Sbjct: 458 VLAQTVLHKDEFKLLNVNGNFISEEGVGELKEIFK 492



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L+ +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVGELKEIFKKSPEML 498



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 17/251 (6%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N  +A    ++        +L ++NL  N +G++G     
Sbjct: 176 LATLKDQLKEVDLSDFVAGRNEAAALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
               +   +    ++G+ G   + + L   + +  LDLR N    EV     GL    + 
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV-----GLVLCKAL 350

Query: 529 IYSLKHMLFYSLCINYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           I   KH     + ++YL    +GA  +A + K    +L  +++A N+I  + A AIA  +
Sbjct: 351 I---KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCI 407

Query: 585 KANEDVAVTSL 595
            A + +A  SL
Sbjct: 408 AAKQLLAKLSL 418


>gi|348682848|gb|EGZ22664.1| hypothetical protein PHYSODRAFT_488550 [Phytophthora sojae]
          Length = 436

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 164/349 (46%), Gaps = 44/349 (12%)

Query: 152 QTLNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYN-QTAEE---VSFAANGITA 204
           Q L  FA  L   S++    +     GD+ +  L+  L  N Q+A E   + F + G+  
Sbjct: 64  QGLQAFADCLAVNSTLKHLSLGSEALGDDAVKTLSAGLARNAQSALESWDLEFKSLGVD- 122

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA--GVERLQLSSVDLRDEG 262
            G  A   +L++N +LKT+ LS N IGDEGVK L + L +NA  GV+ L ++ V +   G
Sbjct: 123 -GAAAVGELLKTNKSLKTVTLSRNQIGDEGVKKLAERLSENAEAGVKELSVTDVGISGAG 181

Query: 263 AKAIAELL----------------------------KNNSILRVLELNNNMIDYSGFTSL 294
             ++A L+                            K N  L  L++    +      +L
Sbjct: 182 LDSLAALVEKESCSLMTLQVSFNGLETASSKFFDAFKTNKSLTKLQMKECKLTDDHVAAL 241

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A AL +NST+  + L+ N        ALA GL  NK+L+ L L  N   DEG   L   L
Sbjct: 242 AAALKQNSTLVEVDLSDNELTQASCAALADGLRDNKTLKILRLENNKCQDEGAVQLADVL 301

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           ++    L  L++GNN++++ G   +   +K  +SL  ++L+ N +G EG  ++  AL  N
Sbjct: 302 ATSNTTLTYLEMGNNALTSVG---MTPLLK-AQSLKELHLFNNKLG-EGLSELLPALLAN 356

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I T  +G N +H   +  +   L  +  + +L++  N +G +G  AL
Sbjct: 357 SAIETFGIGANRLHEALSVTLFNALHSHPSLKTLEMGGNTLGQEGHNAL 405



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 171/391 (43%), Gaps = 57/391 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS R+  D     LA S+  N   EE+  + + + A G++AF   L  N  LK L+L   
Sbjct: 28  MSTRSISDADFGRLASSISGNSQLEELYLSGHKVGAQGLQAFADCLAVNSTLKHLSLGSE 87

Query: 229 PIGDEGVKCLCDILVDNA--GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            +GD+ VK L   L  NA   +E   L    L  +GA A+ ELLK N  L+ + L+ N I
Sbjct: 88  ALGDDAVKTLSAGLARNAQSALESWDLEFKSLGVDGAAAVGELLKTNKSLKTVTLSRNQI 147

Query: 287 DYSGFTSLAEALLENST--IRSLHLNGNYGGALGANALA-----------------KGLE 327
              G   LAE L EN+   ++ L +        G ++LA                  GLE
Sbjct: 148 GDEGVKKLAERLSENAEAGVKELSVTDVGISGAGLDSLAALVEKESCSLMTLQVSFNGLE 207

Query: 328 -----------GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                       NKSL +L +    + D+ + AL + L  +   L  +D+ +N ++    
Sbjct: 208 TASSKFFDAFKTNKSLTKLQMKECKLTDDHVAALAAAL-KQNSTLVEVDLSDNELTQASC 266

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAI 435
             +A+ +++ K+L  + L  N   DEGA ++AD L   N T+T +++G N + S G + +
Sbjct: 267 AALADGLRDNKTLKILRLENNKCQDEGAVQLADVLATSNTTLTYLEMGNNALTSVGMTPL 326

Query: 436 --ARVLKD---------------------NSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
             A+ LK+                     NS I +  +  N +    +  L   L  H +
Sbjct: 327 LKAQSLKELHLFNNKLGEGLSELLPALLANSAIETFGIGANRLHEALSVTLFNALHSHPS 386

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           + TL++G   +G  G   +  +   N ++ +
Sbjct: 387 LKTLEMGGNTLGQEGHNALDRLKEANRSLDV 417



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 11/271 (4%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+  L+  LS+ K   ++  +   SIS      +A  I     L  + L  + +G +G +
Sbjct: 8   GVDDLLQKLSNPKTAKSLYVMSTRSISDADFGRLASSISGNSQLEELYLSGHKVGAQGLQ 67

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKAL 463
             AD L  N T+  + LG   +       ++  L  N  S + S DL +  +G DGA A+
Sbjct: 68  AFADCLAVNSTLKHLSLGSEALGDDAVKTLSAGLARNAQSALESWDLEFKSLGVDGAAAV 127

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
            E+LK + ++ T+ L   QIG  G + +A+ L  N    + +L    + D   SG  GL 
Sbjct: 128 GELLKTNKSLKTVTLSRNQIGDEGVKKLAERLSENAEAGVKEL---SVTDVGISGA-GLD 183

Query: 524 FFHSAIYSLK-HMLFYSLCINYLQGAKC-LAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
              + +      ++   +  N L+ A      +FK  N++LT + +   ++ DD   A+A
Sbjct: 184 SLAALVEKESCSLMTLQVSFNGLETASSKFFDAFKT-NKSLTKLQMKECKLTDDHVAALA 242

Query: 582 QALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            ALK N    +  ++L++N LT+   +AL D
Sbjct: 243 AALKQNS--TLVEVDLSDNELTQASCAALAD 271


>gi|320165354|gb|EFW42253.1| hypothetical protein CAOG_07638 [Capsaspora owczarzaki ATCC 30864]
          Length = 381

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 1/148 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L+EL L+ N IGD G++A+   L      L  LD+  N +   GA  +AE +K  K+
Sbjct: 50  NTTLKELDLYQNQIGDAGLQAVAEALKV-NTTLTSLDLEENRLGDAGAHAIAEALKVNKT 108

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L W+NL  N IGD GA+ IA+ALK N T++++ LG N I   GA AIA  L  N  +  L
Sbjct: 109 LDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGALMVNKQLWWL 168

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTL 476
           D+ +N IG  G +A+ E  + +  +N L
Sbjct: 169 DIRFNFIGKAGLQAIGEARQVNRTLNRL 196



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 98/194 (50%), Gaps = 3/194 (1%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K  D   + N  LK L+L  N IGD G++ + + L  N  +  L L    L D GA AIA
Sbjct: 41  KQIDDAFKVNTTLKELDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGDAGAHAIA 100

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E LK N  L  L LN N I  +G  ++AEAL  N+T+ SLHL  N  G +GA A+A  L 
Sbjct: 101 EALKVNKTLDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGALM 160

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLS-SRKGKLAVLDIGNNSI--SAKGAFHVAEYIK 384
            NK L  L +  N IG  G++A+      +R     ++D   N +  S++     AE ++
Sbjct: 161 VNKQLWWLDIRFNFIGKAGLQAIGEARQVNRTLNRLLIDTQINPLVFSSRPRLATAEDLQ 220

Query: 385 NCKSLLWINLYMND 398
           N   LL   L + D
Sbjct: 221 NVFHLLSSGLALED 234



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 73/118 (61%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++LY N IGD G + +A+ALK N T+T++DL  N +   GA AIA  LK N  +  L+L 
Sbjct: 56  LDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGDAGAHAIAEALKVNKTLDWLNLN 115

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            N IG  GA+A++E LK +  +++L LG  QIG  GA+ +A  L  N  +  LD+R N
Sbjct: 116 KNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGALMVNKQLWWLDIRFN 173



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 33/212 (15%)

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           ++I DA K N T+  +DL  N I   G  A+A  LK N+ +TSLDL  N +G  GA A++
Sbjct: 41  KQIDDAFKVNTTLKELDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGDAGAHAIA 100

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           E LK +  ++ L L   QIG +GA+ +A+ L+ N T+S L L  N + D           
Sbjct: 101 EALKVNKTLDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGD----------- 149

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                 GA+ +A +  +VN+ L  +D+ FN I   G  AI +A 
Sbjct: 150 ---------------------IGAQAIAGAL-MVNKQLWWLDIRFNFIGKAGLQAIGEAR 187

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           + N  +    ++   N L    +  L  A+DL
Sbjct: 188 QVNRTLNRLLIDTQINPLVFSSRPRLATAEDL 219



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 79/152 (51%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           ++   N T +E+    N I  AG++A    L+ N  L +L+L  N +GD G   + + L 
Sbjct: 45  DAFKVNTTLKELDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGDAGAHAIAEALK 104

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
            N  ++ L L+   + D GA+AIAE LK N+ L  L L +N I   G  ++A AL+ N  
Sbjct: 105 VNKTLDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGALMVNKQ 164

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +  L +  N+ G  G  A+ +  + N++L  L
Sbjct: 165 LWWLDIRFNFIGKAGLQAIGEARQVNRTLNRL 196



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 147 FRES--KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           +R+S  K+ +++  K       +D+     GD GL  +AE+L  N T   +    N +  
Sbjct: 34  WRDSLRKKQIDDAFKVNTTLKELDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGD 93

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N  L  LNL+ N IGD G + + + L  N  +  L L    + D GA+
Sbjct: 94  AGAHAIAEALKVNKTLDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQ 153

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           AIA  L  N  L  L++  N I  +G  ++ EA   N T+  L ++
Sbjct: 154 AIAGALMVNKQLWWLDIRFNFIGKAGLQAIGEARQVNRTLNRLLID 199



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 12/153 (7%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +S+D+     GD G   +AE+L  N+T + ++   N I  AG +A  
Sbjct: 69  QAVAEALKVNTTLTSLDLEENRLGDAGAHAIAEALKVNKTLDWLNLNKNQIGDAGAQAIA 128

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAI 266
             L+ N  L +L+L  N IGD G + +   L+ N      QL  +D+R       G +AI
Sbjct: 129 EALKVNTTLSSLHLGDNQIGDIGAQAIAGALMVNK-----QLWWLDIRFNFIGKAGLQAI 183

Query: 267 AELLKNNSILRVLELNN--NMIDYSGFTSLAEA 297
            E  + N  L  L ++   N + +S    LA A
Sbjct: 184 GEARQVNRTLNRLLIDTQINPLVFSSRPRLATA 216


>gi|348551037|ref|XP_003461337.1| PREDICTED: ribonuclease inhibitor-like [Cavia porcellus]
          Length = 611

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 164/354 (46%), Gaps = 13/354 (3%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           +S    GD G+  + + L       + +S    G+T  G      VL S   L+ L LSG
Sbjct: 213 LSTNELGDAGVHLVLQGLQSPTCKIQSLSLPYCGLTETGCGILPSVLPSMPTLRELRLSG 272

Query: 228 NPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           N +GD G++ L   L+D    +E+L L    L D   + +A +L+  + ++ L ++NN I
Sbjct: 273 NSLGDGGLRLLSRGLLDAQCHLEKLHLDYCSLSDASCEPLASMLRAKTNIKKLVMSNNDI 332

Query: 287 DYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             +G   L   L +++  + +L L      A     L   +    SL++L L  N +GD 
Sbjct: 333 HEAGIRMLLSGLKDSACPLETLWLENCGVTAATCKDLCDVVAAKPSLQDLDLGNNRLGDA 392

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+  L S L     +L  L +    I+ +G  ++ + +   +SL  ++L +N +GDEGA 
Sbjct: 393 GLAVLCSQLLHPSCRLRKLWLWECDITTEGCKNLCQVLMAKQSLKALSLMLNRLGDEGAR 452

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIA-----RVLKDNSVITSLDLAYNPIGADGA 460
            + +AL++     T  L    +   G +A        VL  N  +T L L+ N +G  G 
Sbjct: 453 LLCEALRE----PTCQLECLWVKECGFTAACCPYFREVLAQNKFLTELLLSENNLGNTGV 508

Query: 461 KALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           + L + L   G++   L+L  C +  S    +A +L   +++  LDL  NGL D
Sbjct: 509 QELCQALCQPGSVLQVLELVDCNLTNSSCSNLALVLLACHSLRELDLSNNGLGD 562



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 6/270 (2%)

Query: 150 SKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAA 205
           S  +    A  LRA +++    MS  +  + G+  L   L  +    E  +  N G+TAA
Sbjct: 305 SDASCEPLASMLRAKTNIKKLVMSNNDIHEAGIRMLLSGLKDSACPLETLWLENCGVTAA 364

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAK 264
             K    V+ +  +L+ L+L  N +GD G+  LC  +L  +  + +L L   D+  EG K
Sbjct: 365 TCKDLCDVVAAKPSLQDLDLGNNRLGDAGLAVLCSQLLHPSCRLRKLWLWECDITTEGCK 424

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            + ++L     L+ L L  N +   G   L EAL E +  +  L +      A       
Sbjct: 425 NLCQVLMAKQSLKALSLMLNRLGDEGARLLCEALREPTCQLECLWVKECGFTAACCPYFR 484

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L  NK L EL L  N++G+ G++ L   L      L VL++ + +++     ++A  +
Sbjct: 485 EVLAQNKFLTELLLSENNLGNTGVQELCQALCQPGSVLQVLELVDCNLTNSSCSNLALVL 544

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
             C SL  ++L  N +GD G  ++ ++L+Q
Sbjct: 545 LACHSLRELDLSNNGLGDPGVLQLVESLRQ 574



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 169/410 (41%), Gaps = 16/410 (3%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  + V     G+T    +     LQ+N  L  L LS N +GD GV   L  + 
Sbjct: 172 ELLPLIQQHQVVRLQDCGLTEERCRDISSALQANPTLIELCLSTNELGDAGVHLVLQGLQ 231

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI-DYSGFTSLAEALLEN 301
                ++ L L    L + G   +  +L +   LR L L+ N + D          L   
Sbjct: 232 SPTCKIQSLSLPYCGLTETGCGILPSVLPSMPTLRELRLSGNSLGDGGLRLLSRGLLDAQ 291

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  LHL+           LA  L    ++++L +  N I + GIR L+SGL      L
Sbjct: 292 CHLEKLHLDYCSLSDASCEPLASMLRAKTNIKKLVMSNNDIHEAGIRMLLSGLKDSACPL 351

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTI 420
             L + N  ++A     + + +    SL  ++L  N +GD G A   +  L  +  +  +
Sbjct: 352 ETLWLENCGVTAATCKDLCDVVAAKPSLQDLDLGNNRLGDAGLAVLCSQLLHPSCRLRKL 411

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLG 479
            L   +I ++G   + +VL     + +L L  N +G +GA+ L E L+     +  L + 
Sbjct: 412 WLWECDITTEGCKNLCQVLMAKQSLKALSLMLNRLGDEGARLLCEALREPTCQLECLWVK 471

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHM--- 535
            C   A+   +  ++L  N  ++ L L  N L +  V   C  L    S +  L+ +   
Sbjct: 472 ECGFTAACCPYFREVLAQNKFLTELLLSENNLGNTGVQELCQALCQPGSVLQVLELVDCN 531

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           L  S C N       LA    +   +L  +DL+ N + D G   + ++L+
Sbjct: 532 LTNSSCSN-------LALVL-LACHSLRELDLSNNGLGDPGVLQLVESLR 573



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 33/234 (14%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   +D+     GD GL  L   L +      ++      IT  G K    VL +  +LK
Sbjct: 378 SLQDLDLGNNRLGDAGLAVLCSQLLHPSCRLRKLWLWECDITTEGCKNLCQVLMAKQSLK 437

Query: 222 TLNLSGNPIGDEGVKCLCD-----------------------------ILVDNAGVERLQ 252
            L+L  N +GDEG + LC+                             +L  N  +  L 
Sbjct: 438 ALSLMLNRLGDEGARLLCEALREPTCQLECLWVKECGFTAACCPYFREVLAQNKFLTELL 497

Query: 253 LSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           LS  +L + G + + + L +  S+L+VLEL +  +  S  ++LA  LL   ++R L L+ 
Sbjct: 498 LSENNLGNTGVQELCQALCQPGSVLQVLELVDCNLTNSSCSNLALVLLACHSLRELDLSN 557

Query: 312 NYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           N  G  G   L + L + + +L  L L    + DE +R  +  L   K  L ++
Sbjct: 558 NGLGDPGVLQLVESLRQPSCTLECLLLFDIYVSDE-VRDQLEALEKEKPPLRII 610


>gi|260828743|ref|XP_002609322.1| hypothetical protein BRAFLDRAFT_167681 [Branchiostoma floridae]
 gi|229294678|gb|EEN65332.1| hypothetical protein BRAFLDRAFT_167681 [Branchiostoma floridae]
          Length = 284

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 1/282 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD  +  LA  L +    E+++ + N I + G++ F  + Q   +LK LNLS N IGD 
Sbjct: 2   IGDVCMRSLASVLHHLSCLEDLNLSYNNIGSEGMEPFAAIEQPVASLKELNLSNNKIGDV 61

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            ++ L  +L   + VE L LS  ++ +EG +  A + +  + L+VL L NN I      S
Sbjct: 62  CMRYLASVLHHLSCVEDLNLSYNNIGNEGLEPFAAIQQPVASLKVLNLCNNKIGDVCMRS 121

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA  L   S +  L+L+ N  G  G    A   +   SL+EL L  N IGD  +R+L S 
Sbjct: 122 LASVLHHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLKELSLSHNKIGDVCMRSLASL 181

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L  L++  N+I  +G    A   +   SL  +NL +N IGD     +A  L  
Sbjct: 182 LHHLPC-LVDLNLSYNNIGYEGLEPFAAIQQPVASLKVLNLCINKIGDVCMRSLAAVLHH 240

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
              +  +DL  NNI   G ++I   L     +  L L+ N I
Sbjct: 241 LSCLEDLDLSQNNIGDAGLASIVASLHHVPCLKYLTLSGNSI 282



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 1/253 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  +      + + +   +++S    GD  + +LA  L +    E+++ + N I   G++
Sbjct: 33  EGMEPFAAIEQPVASLKELNLSNNKIGDVCMRYLASVLHHLSCVEDLNLSYNNIGNEGLE 92

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            F  + Q   +LK LNL  N IGD  ++ L  +L   + VE L LS  ++ +EG +  A 
Sbjct: 93  PFAAIQQPVASLKVLNLCNNKIGDVCMRSLASVLHHLSCVEDLNLSYNNIGNEGLELFAA 152

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           + +  + L+ L L++N I      SLA  L     +  L+L+ N  G  G    A   + 
Sbjct: 153 IQQPVASLKELSLSHNKIGDVCMRSLASLLHHLPCLVDLNLSYNNIGYEGLEPFAAIQQP 212

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
             SL+ L+L  N IGD  +R+L + L      L  LD+  N+I   G   +   + +   
Sbjct: 213 VASLKVLNLCINKIGDVCMRSLAAVL-HHLSCLEDLDLSQNNIGDAGLASIVASLHHVPC 271

Query: 389 LLWINLYMNDIGD 401
           L ++ L  N I +
Sbjct: 272 LKYLTLSGNSITE 284



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 10/273 (3%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +   +LA  L     L +L+L  N+IG EG+    + +      L  L++ NN I   
Sbjct: 3   GDVCMRSLASVLHHLSCLEDLNLSYNNIGSEGMEPF-AAIEQPVASLKELNLSNNKIGDV 61

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
              ++A  + +   +  +NL  N+IG+EG E  A   +   ++  ++L  N I      +
Sbjct: 62  CMRYLASVLHHLSCVEDLNLSYNNIGNEGLEPFAAIQQPVASLKVLNLCNNKIGDVCMRS 121

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A VL   S +  L+L+YN IG +G +  + + +   ++  L L   +IG      +A +
Sbjct: 122 LASVLHHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLKELSLSHNKIGDVCMRSLASL 181

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L +   +  L+L  N +      G  GL  F +    +  +   +LCIN + G  C+   
Sbjct: 182 LHHLPCLVDLNLSYNNI------GYEGLEPFAAIQQPVASLKVLNLCINKI-GDVCMRSL 234

Query: 555 FKVVNE--ALTSIDLAFNEIRDDGAFAIAQALK 585
             V++    L  +DL+ N I D G  +I  +L 
Sbjct: 235 AAVLHHLSCLEDLDLSQNNIGDAGLASIVASLH 267



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 1/284 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IGD  ++ L  +L   + +E L LS  ++  EG +  A + +  + L+ L L+NN I   
Sbjct: 2   IGDVCMRSLASVLHHLSCLEDLNLSYNNIGSEGMEPFAAIEQPVASLKELNLSNNKIGDV 61

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
               LA  L   S +  L+L+ N  G  G    A   +   SL+ L+L  N IGD  +R+
Sbjct: 62  CMRYLASVLHHLSCVEDLNLSYNNIGNEGLEPFAAIQQPVASLKVLNLCNNKIGDVCMRS 121

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L S L      +  L++  N+I  +G    A   +   SL  ++L  N IGD     +A 
Sbjct: 122 LASVL-HHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLKELSLSHNKIGDVCMRSLAS 180

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L     +  ++L  NNI  +G    A + +  + +  L+L  N IG    ++L+ VL  
Sbjct: 181 LLHHLPCLVDLNLSYNNIGYEGLEPFAAIQQPVASLKVLNLCINKIGDVCMRSLAAVLHH 240

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
              +  L L    IG +G   +   L +   +  L L  N + +
Sbjct: 241 LSCLEDLDLSQNNIGDAGLASIVASLHHVPCLKYLTLSGNSITE 284



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 82/179 (45%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           A   +L+    K+     ++L      L     +++S  N G+EGL   A       + +
Sbjct: 102 ASLKVLNLCNNKIGDVCMRSLASVLHHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLK 161

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+S + N I    +++   +L     L  LNLS N IG EG++    I    A ++ L L
Sbjct: 162 ELSLSHNKIGDVCMRSLASLLHHLPCLVDLNLSYNNIGYEGLEPFAAIQQPVASLKVLNL 221

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
               + D   +++A +L + S L  L+L+ N I  +G  S+  +L     ++ L L+GN
Sbjct: 222 CINKIGDVCMRSLAAVLHHLSCLEDLDLSQNNIGDAGLASIVASLHHVPCLKYLTLSGN 280


>gi|320165465|gb|EFW42364.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 348

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 113/233 (48%), Gaps = 35/233 (15%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  + L+ N +GD GA  IA+ LK N T+  + L  N I   GA AIA  L+ N+ +TS
Sbjct: 7   NLFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTS 66

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L  N IG  GA+A+++ LK +  +  L L    IG    + +A+ L  N T++ L L 
Sbjct: 67  LSLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLW 126

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            N +    C+                             GA+ LA++ K  N  LT +D+
Sbjct: 127 ENQI---TCT-----------------------------GAQALAEALK-ANTTLTELDM 153

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 620
             N+I D GA AIA+ALK NE   +T L L  NFLT  G +      + + E+
Sbjct: 154 GSNQIGDVGARAIAEALKVNE--TLTELLLYENFLTTDGVATFRQTGNAICEL 204



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 94/177 (53%), Gaps = 1/177 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L LH N +GD G  A+   L      L  L +  N I   GA  +AE ++   ++  ++L
Sbjct: 11  LCLHNNKLGDAGATAIAEVLKVNT-TLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSL 69

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IG+ GA+ IADALK N T+T + L  N I      AIA  L+ N+ +T L L  N 
Sbjct: 70  NENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQ 129

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           I   GA+AL+E LK +  +  L +G  QIG  GA  +A+ L+ N T++ L L  N L
Sbjct: 130 ITCTGAQALAEALKANTTLTELDMGSNQIGDVGARAIAEALKVNETLTELLLYENFL 186



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 3/178 (1%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  L + NN +   GA  +AE +K   +L  + L  N IG+ GA+ IA+AL+ N T+T++
Sbjct: 8   LFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSL 67

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N I   GA AIA  LK N+ +T L LA NPIG    +A++E L+ +  +  L L  
Sbjct: 68  SLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWE 127

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
            QI  +GA+ +A+ L+ N T++ LD+ +N + D    G   ++       +L  +L Y
Sbjct: 128 NQITCTGAQALAEALKANTTLTELDMGSNQIGD---VGARAIAEALKVNETLTELLLY 182



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 1/184 (0%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL L  N +GD G   + ++L  N  ++ L L+   + + GA+AIAE L+ N+ +  L
Sbjct: 8   LFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSL 67

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            LN N I  +G  ++A+AL  N+T+  L L  N  G +   A+A+ LE N +L EL+L  
Sbjct: 68  SLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWE 127

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I   G +AL   L +    L  LD+G+N I   GA  +AE +K  ++L  + LY N +
Sbjct: 128 NQITCTGAQALAEALKANT-TLTELDMGSNQIGDVGARAIAEALKVNETLTELLLYENFL 186

Query: 400 GDEG 403
             +G
Sbjct: 187 TTDG 190



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 95/174 (54%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE L  N T + +  A N I  AG +A    L+ N  + +L+L+ N IG+ 
Sbjct: 18  LGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIGEA 77

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + D L  N  +  L L+   + D   +AIAE L+ N+ L  L L  N I  +G  +
Sbjct: 78  GAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQITCTGAQA 137

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
           LAEAL  N+T+  L +  N  G +GA A+A+ L+ N++L EL L+ N +  +G+
Sbjct: 138 LAEALKANTTLTELDMGSNQIGDVGARAIAEALKVNETLTELLLYENFLTTDGV 191



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 83/155 (53%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +  AG  A   VL+ N  LK L L+ N IG+ G + + + L  N  +  L L+   + 
Sbjct: 16  NKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIG 75

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           + GA+AIA+ LK N+ L  L L  N I      ++AEAL  N+T+  L+L  N     GA
Sbjct: 76  EAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQITCTGA 135

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
            ALA+ L+ N +L EL +  N IGD G RA+   L
Sbjct: 136 QALAEALKANTTLTELDMGSNQIGDVGARAIAEAL 170



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 71/147 (48%), Gaps = 11/147 (7%)

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
           F  N+ TL L   ++G +GA  +A++L+ N T+  L L  N +      G  G      A
Sbjct: 4   FPWNLFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQI------GEAGAQAIAEA 57

Query: 529 IYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           +     M   SL  N +   GA+ +A + K VN  LT + LA N I D    AIA+AL+ 
Sbjct: 58  LEVNTTMTSLSLNENRIGEAGAQAIADALK-VNTTLTDLVLAKNPIGDVAVQAIAEALEV 116

Query: 587 NEDVAVTSLNLANNFLTKFGQSALTDA 613
           N    +T L L  N +T  G  AL +A
Sbjct: 117 N--TTLTELYLWENQITCTGAQALAEA 141


>gi|320166876|gb|EFW43775.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 440

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 30/237 (12%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V NA  ERL L    +  +GA AIAE +K N+ L  L L    +  +G  ++AEA+  N 
Sbjct: 21  VMNAPNERLFLYDNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNR 80

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+  L+L+ N  G +GA +LA  L+ NK +  L L  N  GD G++              
Sbjct: 81  TLTELNLSRNQIGPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQ-------------- 126

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
                           +AE +   K+L  I L+ N IGD GA  +A+AL+ N+T+  + L
Sbjct: 127 ---------------EIAEMLFVNKTLEMIYLHENQIGDAGAPAVAEALEVNKTLKELKL 171

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
             N+I   GA A    LK NS +T +DL+ N IG  GA+A+++  K +    T  +G
Sbjct: 172 SENHIGDAGAQAFGEALKVNSTVT-IDLSNNCIGKAGARAMADARKVNPTRLTPHMG 227



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 36/223 (16%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LY N +G +GA  IA+A+K N ++T + L   ++   GA AIA  ++ N  +T L+L+ N
Sbjct: 31  LYDNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNRTLTELNLSRN 90

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA++L+  LK +  +  L L   Q G +G + +A+ML  N T+ ++ L  N + D
Sbjct: 91  QIGPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLEMIYLHENQIGD 150

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                            GA  +A++ + VN+ L  + L+ N I 
Sbjct: 151 --------------------------------AGAPAVAEALE-VNKTLKELKLSENHIG 177

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           D GA A  +ALK N  V   +++L+NN + K G  A+ DA+ +
Sbjct: 178 DAGAQAFGEALKVNSTV---TIDLSNNCIGKAGARAMADARKV 217



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 34/220 (15%)

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N +   GA  +AE IK   SL  ++L   D+GD GA  IA+A++ NRT+T ++L  N I
Sbjct: 33  DNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNRTLTELNLSRNQI 92

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              GA ++A  LK N  +  L LA N  G  G + ++E+L  +  +  + L   QIG +G
Sbjct: 93  GPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLEMIYLHENQIGDAG 152

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG 547
           A  VA+ L  N T+  L L  N + D                                 G
Sbjct: 153 APAVAEALEVNKTLKELKLSENHIGD--------------------------------AG 180

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           A+   ++ K VN  +T IDL+ N I   GA A+A A K N
Sbjct: 181 AQAFGEALK-VNSTVT-IDLSNNCIGKAGARAMADARKVN 218



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 1/178 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G +G   +AE++  N +  E+S     +  AG +A    ++ N  L  LNLS N IG 
Sbjct: 35  QVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNRTLTELNLSRNQIGP 94

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L   L  N  VE L L++    D G + IAE+L  N  L ++ L+ N I  +G  
Sbjct: 95  VGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLEMIYLHENQIGDAGAP 154

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           ++AEAL  N T++ L L+ N+ G  GA A  + L+ N ++  + L  N IG  G RA+
Sbjct: 155 AVAEALEVNKTLKELKLSENHIGDAGAQAFGEALKVNSTV-TIDLSNNCIGKAGARAM 211



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 2/193 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N   E +    N +   G  A    ++ N +L  L+L    +GD G + + + +  N  +
Sbjct: 23  NAPNERLFLYDNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNRTL 82

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L LS   +   GA+++A  LK N  + VL L  N    +G   +AE L  N T+  ++
Sbjct: 83  TELNLSRNQIGPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLEMIY 142

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G  GA A+A+ LE NK+L+EL L  N IGD G +A   G + +      +D+ N
Sbjct: 143 LHENQIGDAGAPAVAEALEVNKTLKELKLSENHIGDAGAQAF--GEALKVNSTVTIDLSN 200

Query: 369 NSISAKGAFHVAE 381
           N I   GA  +A+
Sbjct: 201 NCIGKAGARAMAD 213



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 30/209 (14%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+    L L  N  G  GA A+A+ ++ N SL EL L    +GD G RA           
Sbjct: 23  NAPNERLFLYDNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARA----------- 71

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
                             +AE I+  ++L  +NL  N IG  GA+ +A ALK N+ +  +
Sbjct: 72  ------------------IAEAIRVNRTLTELNLSRNQIGPVGAQSLAAALKVNKKVEVL 113

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N     G   IA +L  N  +  + L  N IG  GA A++E L+ +  +  LKL  
Sbjct: 114 FLAANQFGDAGLQEIAEMLFVNKTLEMIYLHENQIGDAGAPAVAEALEVNKTLKELKLSE 173

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRAN 509
             IG +GA+   + L+ N+T++I DL  N
Sbjct: 174 NHIGDAGAQAFGEALKVNSTVTI-DLSNN 201



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   +AE++  N+T  E++ + N I   G ++    L+ N  ++ L L+ N  GD
Sbjct: 63  DLGDAGARAIAEAIRVNRTLTELNLSRNQIGPVGAQSLAAALKVNKKVEVLFLAANQFGD 122

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G++ + ++L  N  +E + L    + D GA A+AE L+ N  L+ L+L+ N I  +G  
Sbjct: 123 AGLQEIAEMLFVNKTLEMIYLHENQIGDAGAPAVAEALEVNKTLKELKLSENHIGDAGAQ 182

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +  EAL  NST+ ++ L+ N  G  GA A+A   + N +    H+
Sbjct: 183 AFGEALKVNSTV-TIDLSNNCIGKAGARAMADARKVNPTRLTPHM 226



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +++S    G  G   LA +L  N+  E +  AAN    AG++    +L  N  L+
Sbjct: 80  RTLTELNLSRNQIGPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLE 139

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            + L  N IGD G   + + L  N  ++ L+LS   + D GA+A  E LK NS +  ++L
Sbjct: 140 MIYLHENQIGDAGAPAVAEALEVNKTLKELKLSENHIGDAGAQAFGEALKVNSTV-TIDL 198

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +NN I  +G  ++A+A   N T  + H+
Sbjct: 199 SNNCIGKAGARAMADARKVNPTRLTPHM 226


>gi|47212943|emb|CAF92620.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 403

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 149/316 (47%), Gaps = 20/316 (6%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +D+S  N  DEGL  LA+ L  + T   +    N   A        +LQ N  L 
Sbjct: 90  RRVTGLDVSYNNITDEGLRHLADLLRGDSTLNFLDLRFNECQADSAAVLAKILQGNRTLF 149

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L LSGN IGD G   L  +L  N  +  L+LS+ DL       +A +L++N  LR ++ 
Sbjct: 150 SLRLSGNKIGDRGGTQLATMLQVNDSLMELELSACDLGIHSVMMLAHVLRSNRSLRCVDF 209

Query: 282 NNNMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + +++          ++  L+ NST+  L L        G   LA+GL+ N SLR L L 
Sbjct: 210 SQSLLISHQEEWLVHVSNMLVVNSTLLELRLGMAGITDTGVQRLAEGLQLNHSLRYLDLR 269

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYM 396
            NS+  +G   L   L  R   L V+D+  N I  +GA H++    +  C  L  +++  
Sbjct: 270 CNSLSCDGGFYLAEVL-RRNPTLDVIDLSFNRIQDEGAVHLSRALSLPGC-GLRALSVRS 327

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI------ARVLKDNSVITSLDL 450
           N I  EG   +A A+K N ++T I++ GN +    + A        R+L D + +T+ ++
Sbjct: 328 NSIRTEGLLSLARAVKVNASLTDINIWGNYLEEPVSQAFHQLISSQRLLPDRTDVTAYEV 387

Query: 451 AYNPIGADGAKALSEV 466
                  DG   L+EV
Sbjct: 388 -------DGRVFLAEV 396



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 41/318 (12%)

Query: 247 GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
           G++R+Q     L D  A A+++ LKNN  +  L+++ N I   G   LA+ L  +ST+  
Sbjct: 67  GMKRVQ----RLDDRDALAVSKCLKNNRRVTGLDVSYNNITDEGLRHLADLLRGDSTLNF 122

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL----SSRKGKLA 362
           L L  N   A  A  LAK L+GN++L  L L GN IGD G   L + L    S  + +L+
Sbjct: 123 LDLRFNECQADSAAVLAKILQGNRTLFSLRLSGNKIGDRGGTQLATMLQVNDSLMELELS 182

Query: 363 VLDIGNNSI--------------------------SAKGAFHVAEYIKNCKSLLWINLYM 396
             D+G +S+                            +   HV+  +    +LL + L M
Sbjct: 183 ACDLGIHSVMMLAHVLRSNRSLRCVDFSQSLLISHQEEWLVHVSNMLVVNSTLLELRLGM 242

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             I D G +++A+ L+ N ++  +DL  N++   G   +A VL+ N  +  +DL++N I 
Sbjct: 243 AGITDTGVQRLAEGLQLNHSLRYLDLRCNSLSCDGGFYLAEVLRRNPTLDVIDLSFNRIQ 302

Query: 457 ADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
            +GA  LS  L   G  +  L +    I   G   +A  ++ N +++ +++  N L + V
Sbjct: 303 DEGAVHLSRALSLPGCGLRALSVRSNSIRTEGLLSLARAVKVNASLTDINIWGNYLEEPV 362

Query: 516 CSGCNGLSFFHSAIYSLK 533
                    FH  I S +
Sbjct: 363 SQA------FHQLISSQR 374



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 115/226 (50%), Gaps = 8/226 (3%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           + A  V++ +KN + +  +++  N+I DEG   +AD L+ + T+  +DL  N   +  A+
Sbjct: 77  RDALAVSKCLKNNRRVTGLDVSYNNITDEGLRHLADLLRGDSTLNFLDLRFNECQADSAA 136

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            +A++L+ N  + SL L+ N IG  G   L+ +L+ + ++  L+L  C +G      +A 
Sbjct: 137 VLAKILQGNRTLFSLRLSGNKIGDRGGTQLATMLQVNDSLMELELSACDLGIHSVMMLAH 196

Query: 494 MLRYNNTISILDLRANGL---RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +LR N ++  +D   + L   ++E     + +   +S +  L+      +      G + 
Sbjct: 197 VLRSNRSLRCVDFSQSLLISHQEEWLVHVSNMLVVNSTLLELR----LGMAGITDTGVQR 252

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
           LA+  + +N +L  +DL  N +  DG F +A+ L+ N  + V  L+
Sbjct: 253 LAEGLQ-LNHSLRYLDLRCNSLSCDGGFYLAEVLRRNPTLDVIDLS 297



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 37/269 (13%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A++K L+ N+ +  L +  N+I DEG+R L   L      L  LD+  N   A  A  
Sbjct: 79  ALAVSKCLKNNRRVTGLDVSYNNITDEGLRHLADLLRG-DSTLNFLDLRFNECQADSAAV 137

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ ++  ++L  + L  N IGD G  ++A  L+ N ++  ++L   ++       +A V
Sbjct: 138 LAKILQGNRTLFSLRLSGNKIGDRGGTQLATMLQVNDSLMELELSACDLGIHSVMMLAHV 197

Query: 439 LKDNSVITSLDLAYNPIGADGAKAL---SEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           L+ N  +  +D + + + +   + L   S +L  +  +  L+LG   I  +G + +A+ L
Sbjct: 198 LRSNRSLRCVDFSQSLLISHQEEWLVHVSNMLVVNSTLLELRLGMAGITDTGVQRLAEGL 257

Query: 496 RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           + N+++  LDLR N L       C+G               FY            LA+  
Sbjct: 258 QLNHSLRYLDLRCNSL------SCDGG--------------FY------------LAEVL 285

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           +  N  L  IDL+FN I+D+GA  +++AL
Sbjct: 286 RR-NPTLDVIDLSFNRIQDEGAVHLSRAL 313


>gi|198437939|ref|XP_002125774.1| PREDICTED: similar to LOC496076 protein [Ciona intestinalis]
          Length = 377

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 38/273 (13%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLS 254
           I A    A D +L +   LK L+L+GN        +GD+ V+ LC IL  +  +  L L 
Sbjct: 29  INALVKSAKDFLLSTTNELK-LDLAGNNKLMTDKRLGDKDVEVLCAILGKSTALTSLDLR 87

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
             +L D+ A +I++L+K    L+ L +  N     G   +AEALL + T+RSL +NGN  
Sbjct: 88  YNNLTDDAAPSISKLIKETPSLKELNIMCNDFTEKGAEHIAEALLTSQTLRSLKVNGNKI 147

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G    A+ L+ N  LRE                             LD+G+  +  +
Sbjct: 148 GNRGGMYFAQALQINNKLRE-----------------------------LDLGDCDLE-E 177

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
              HV   +K   +L  I+L   D+ D G E++ D L  N ++  ++L  N I   GA+ 
Sbjct: 178 CVVHVGRMLKVNHTLREIHLAKFDMKDFGVERLCDGLYDNFSLGYLNLSCNRITRDGAAV 237

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +A++L+ N+ +  LDL +N I  DGAK ++  L
Sbjct: 238 LAKLLRRNTPLEILDLGFNRIEEDGAKHIASAL 270



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 3/254 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A +S+D+   N  D+    +++ +    + +E++   N  T  G +     L ++  L++
Sbjct: 80  ALTSLDLRYNNLTDDAAPSISKLIKETPSLKELNIMCNDFTEKGAEHIAEALLTSQTLRS 139

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GN IG+ G       L  N  +  L L   DL +E    +  +LK N  LR + L 
Sbjct: 140 LKVNGNKIGNRGGMYFAQALQINNKLRELDLGDCDL-EECVVHVGRMLKVNHTLREIHLA 198

Query: 283 N-NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +M D+ G   L + L +N ++  L+L+ N     GA  LAK L  N  L  L L  N 
Sbjct: 199 KFDMKDF-GVERLCDGLYDNFSLGYLNLSCNRITRDGAAVLAKLLRRNTPLEILDLGFNR 257

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I ++G + + S LS+    L  L + +N I   G   +A  +    SL  + ++ ND+ +
Sbjct: 258 IEEDGAKHIASALSTSNSNLKALVVVSNCIQGNGIVSLASSLNTNSSLSNLYIWGNDLDE 317

Query: 402 EGAEKIADALKQNR 415
              + + + ++  R
Sbjct: 318 NACKAMGELIRSRR 331



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD+  E +   L ++  +T++DL  NN+    A +I++++K+   +  L++  N     
Sbjct: 63  LGDKDVEVLCAILGKSTALTSLDLRYNNLTDDAAPSISKLIKETPSLKELNIMCNDFTEK 122

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+ ++E L     + +LK+   +IG  G  + A  L+ NN +  LDL    L + V   
Sbjct: 123 GAEHIAEALLTSQTLRSLKVNGNKIGNRGGMYFAQALQINNKLRELDLGDCDLEECVVHV 182

Query: 519 CNGLSFFHS------AIYSLKHMLFYSLC--------INYL---------QGAKCLAQSF 555
              L   H+      A + +K      LC        + YL          GA  LA+  
Sbjct: 183 GRMLKVNHTLREIHLAKFDMKDFGVERLCDGLYDNFSLGYLNLSCNRITRDGAAVLAKLL 242

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           +  N  L  +DL FN I +DGA  IA AL
Sbjct: 243 R-RNTPLEILDLGFNRIEEDGAKHIASAL 270


>gi|149042678|gb|EDL96315.1| rCG49763 [Rattus norvegicus]
          Length = 185

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 107/185 (57%), Gaps = 1/185 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA+ L+ N+ L  L L  N+I + G+  LM  L + +  L+ L++  NSIS +GA  +A
Sbjct: 2   ALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQ-TLSSLNLRENSISPEGAQALA 60

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +    +L  ++L  N + D+GA+ IA A+ +N ++T + L  N I +  A A+ + L+
Sbjct: 61  QALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQ 120

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+LDL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T
Sbjct: 121 LNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRT 180

Query: 501 ISILD 505
           + IL+
Sbjct: 181 LEILE 185



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 1/185 (0%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+AE LK N  L  L+L +N I  +G   L  AL  N T+ SL+L  N     GA ALA+
Sbjct: 2   ALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQ 61

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N +L+ L L  N + D+G +A+ + +      L  L +  N I A  A  + + ++
Sbjct: 62  ALCRNTTLKHLDLTANLLHDQGAQAIATAV-GENCSLTHLHLQWNFIQAGAARALGQALQ 120

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             ++L  ++L  N IGDEGA  +A ALK N T+T + L   +I S+GA A+   L  N  
Sbjct: 121 LNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRT 180

Query: 445 ITSLD 449
           +  L+
Sbjct: 181 LEILE 185



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 91/179 (50%)

Query: 180 FFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC 239
             LAE+L  NQ  E +   +N I+  G+      L +N  L +LNL  N I  EG + L 
Sbjct: 1   MALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALA 60

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
             L  N  ++ L L++  L D+GA+AIA  +  N  L  L L  N I      +L +AL 
Sbjct: 61  QALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQ 120

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            N T+ +L L  N  G  GA+++A  L+ N +L  L+L   SIG +G +AL   L+  +
Sbjct: 121 LNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNR 179



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 37/194 (19%)

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +A+ALK N+ +  +DL  N I + G + + R L  N  ++SL+L  N I  +GA+AL++ 
Sbjct: 3   LAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQA 62

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           L             C+               N T+  LDL AN L D+   G   ++   
Sbjct: 63  L-------------CR---------------NTTLKHLDLTANLLHDQ---GAQAIATAV 91

Query: 527 SAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
               SL H+    L  N++Q   A+ L Q+ + +N  LT++DL  N I D+GA ++A AL
Sbjct: 92  GENCSLTHL---HLQWNFIQAGAARALGQALQ-LNRTLTTLDLQENAIGDEGASSVAGAL 147

Query: 585 KANEDVAVTSLNLA 598
           K N  +    L +A
Sbjct: 148 KVNTTLTALYLQVA 161



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 54/117 (46%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +D++     D+G   +A ++G N +   +    N I A   +A    LQ N  L TL
Sbjct: 69  LKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 128

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           +L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E L  N  L +LE
Sbjct: 129 DLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRTLEILE 185



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 28/182 (15%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K  +   ++D+      + G+  L  +L  NQT   ++   N I+  G +A    
Sbjct: 3   LAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQA 62

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL-------------------- 253
           L  N  LK L+L+ N + D+G + +   + +N  +  L L                    
Sbjct: 63  LCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLN 122

Query: 254 ---SSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
              +++DL+     DEGA ++A  LK N+ L  L L    I   G  +L EAL  N T+ 
Sbjct: 123 RTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRTLE 182

Query: 306 SL 307
            L
Sbjct: 183 IL 184


>gi|410916745|ref|XP_003971847.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Takifugu rubripes]
          Length = 495

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 100/175 (57%), Gaps = 2/175 (1%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           SL +AL    T+++LH+  ++        L K L  + SLREL L  N IGD+G +A+  
Sbjct: 287 SLGKALKSCLTLKTLHVCLSHMDDNKCCRLVKHLSDHPSLRELDLSYNLIGDKGAKAISQ 346

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L+  K +L  L + NN I   GA  +A+ + +  +LL +NL +N + DEG E IA AL 
Sbjct: 347 LLN--KSRLETLKMCNNCIGDPGAKAIAQALSHNGTLLSLNLRLNCLQDEGGEAIAGALL 404

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +N ++  + LG N +    A+ +A+ L+ N  + S++L++N +G DG KAL   L
Sbjct: 405 RNDSLCHLHLGANELTGHTAAMLAKALRQNKTLRSINLSFNKLGVDGGKALQAAL 459



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 17/244 (6%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            H+   +K+C      +L+  +I D   E +  ALK   T+ T+ +  +++       + 
Sbjct: 260 LHLVYQVKDCGMNFEWSLF--EITDRDCESLGKALKSCLTLKTLHVCLSHMDDNKCCRLV 317

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + L D+  +  LDL+YN IG  GAKA+S++L     + TLK+    IG  GA+ +A  L 
Sbjct: 318 KHLSDHPSLRELDLSYNLIGDKGAKAISQLLN-KSRLETLKMCNNCIGDPGAKAIAQALS 376

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQS 554
           +N T+  L+LR N L+DE      G      A+     +    L  N L G  A  LA++
Sbjct: 377 HNGTLLSLNLRLNCLQDE------GGEAIAGALLRNDSLCHLHLGANELTGHTAAMLAKA 430

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
            +  N+ L SI+L+FN++  DG  A+  AL  N     T L   +  LT+    + +  K
Sbjct: 431 LRQ-NKTLRSINLSFNKLGVDGGKALQAALSCN-----TILTECDVRLTEIEDQSASSIK 484

Query: 615 DLVY 618
            +V+
Sbjct: 485 QVVW 488



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 30/241 (12%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           IT    ++    L+S + LKTL++  + + D     L   L D+  +  L LS   + D+
Sbjct: 280 ITDRDCESLGKALKSCLTLKTLHVCLSHMDDNKCCRLVKHLSDHPSLRELDLSYNLIGDK 339

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAI++LL N S L  L++ NN I   G  ++A+AL  N T+ SL+L  N     G  A
Sbjct: 340 GAKAISQLL-NKSRLETLKMCNNCIGDPGAKAIAQALSHNGTLLSLNLRLNCLQDEGGEA 398

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A  L  N SL  LHL                             G N ++   A  +A+
Sbjct: 399 IAGALLRNDSLCHLHL-----------------------------GANELTGHTAAMLAK 429

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++  K+L  INL  N +G +G + +  AL  N  +T  D+    I  + AS+I +V+  
Sbjct: 430 ALRQNKTLRSINLSFNKLGVDGGKALQAALSCNTILTECDVRLTEIEDQSASSIKQVVWS 489

Query: 442 N 442
           N
Sbjct: 490 N 490



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 9/183 (4%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  + +L+ L+LS N IGD+G K +  +L + + +E L++ +  + D GAKAIA+ L +N
Sbjct: 320 LSDHPSLRELDLSYNLIGDKGAKAISQLL-NKSRLETLKMCNNCIGDPGAKAIAQALSHN 378

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L  N +   G  ++A ALL N ++  LHL  N      A  LAK L  NK+LR
Sbjct: 379 GTLLSLNLRLNCLQDEGGEAIAGALLRNDSLCHLHLGANELTGHTAAMLAKALRQNKTLR 438

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            ++L  N +G +G +AL + LS     L   D+    I  + A  +       K ++W N
Sbjct: 439 SINLSFNKLGVDGGKALQAALSCNT-ILTECDVRLTEIEDQSASSI-------KQVVWSN 490

Query: 394 LYM 396
            ++
Sbjct: 491 QHL 493



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 31/185 (16%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +   +D+S    GD+G   +++ L  ++  E +    N I   G KA    L  N  L +
Sbjct: 325 SLRELDLSYNLIGDKGAKAISQLLNKSRL-ETLKMCNNCIGDPGAKAIAQALSHNGTLLS 383

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA-ELLKNNSILRVLEL 281
           LNL  N                             L+DEG +AIA  LL+N+S+   L L
Sbjct: 384 LNLRLNC----------------------------LQDEGGEAIAGALLRNDSLCH-LHL 414

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +       LA+AL +N T+RS++L+ N  G  G  AL   L  N  L E  +    
Sbjct: 415 GANELTGHTAAMLAKALRQNKTLRSINLSFNKLGVDGGKALQAALSCNTILTECDVRLTE 474

Query: 342 IGDEG 346
           I D+ 
Sbjct: 475 IEDQS 479



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 5/148 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++ M     GD G   +A++L +N T   ++   N +   G +A  G L  N +L  L
Sbjct: 353 LETLKMCNNCIGDPGAKAIAQALSHNGTLLSLNLRLNCLQDEGGEAIAGALLRNDSLCHL 412

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N +       L   L  N  +  + LS   L  +G KA+   L  N+IL   ++  
Sbjct: 413 HLGANELTGHTAAMLAKALRQNKTLRSINLSFNKLGVDGGKALQAALSCNTILTECDVRL 472

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNG 311
             I+    +S+ + +  N      HL G
Sbjct: 473 TEIEDQSASSIKQVVWSNQ-----HLEG 495


>gi|410060810|gb|AFV53357.1| nucleotide-binding oligomerization domain-containing protein 1
           [Epinephelus coioides]
          Length = 940

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 4/261 (1%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++L   D+      A+  +L++   L  ++++NN I   G   L  +  + + +R   L+
Sbjct: 667 IKLGYCDVYSGDCTALNFVLQHRQKLLGVDMDNNNISDYGVKQLKPSFSKMTVVR---LS 723

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N         LA+ L  +K +  L L+ N I D G + L++ +     KL  + IG N 
Sbjct: 724 VNRLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAK-LVARIIEECPKLRTVKIGKNK 782

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I++ G  ++A  I+   S+  + ++ N IGDEGAE  A+ALKQ+  +T + L  N I SK
Sbjct: 783 ITSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSK 842

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G   +A  LK+NSV+    L  N +  D A  L+E+++ +  +  L L   Q    G + 
Sbjct: 843 GGKCLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQANTGLLHLWLISNQFTVDGIKQ 902

Query: 491 VADMLRYNNTISILDLRANGL 511
           +A+ L +N  +  + ++ N L
Sbjct: 903 LAEALTHNTALKEICVKGNQL 923



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 16/264 (6%)

Query: 197 FAANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
             A GITA  IK            A + VLQ    L  +++  N I D GVK    +   
Sbjct: 657 MTAKGITANLIKLGYCDVYSGDCTALNFVLQHRQKLLGVDMDNNNISDYGVK---QLKPS 713

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
            + +  ++LS   L D   + +AE L  + I+ +L L NN I  +G   +A  + E   +
Sbjct: 714 FSKMTVVRLSVNRLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLVARIIEECPKL 773

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R++ +  N   ++G   LA  ++ + S+ ++ + GNSIGDEG  A    L  +  +L  L
Sbjct: 774 RTVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEAL-KQHPRLTNL 832

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  N I++KG   +AE +K    L    L  N++ D+ A  +A+ ++ N  +  + L  
Sbjct: 833 SLSANGITSKGGKCLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQANTGLLHLWLIS 892

Query: 425 NNIHSKGASAIARVLKDNSVITSL 448
           N     G   +A  L  N+ +  +
Sbjct: 893 NQFTVDGIKQLAEALTHNTALKEI 916



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 3/199 (1%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           R S  ++   A+EL     V+M G       D G   +A  +        V    N IT+
Sbjct: 726 RLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLVARIIEECPKLRTVKIGKNKITS 785

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +     +Q + ++  + + GN IGDEG +   + L  +  +  L LS+  +  +G K
Sbjct: 786 VGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSKGGK 845

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +AE LK NS+LR+  L  N +       LAE +  N+ +  L L  N     G   LA+
Sbjct: 846 CLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQANTGLLHLWLISNQFTVDGIKQLAE 905

Query: 325 GLEGNKSLRELHLHGNSIG 343
            L  N +L+E+ + GN + 
Sbjct: 906 ALTHNTALKEICVKGNQLS 924



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 4/205 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           KQ    F+K     + V +S     D  +  LAE L  ++  E +    N IT AG K  
Sbjct: 708 KQLKPSFSK----MTVVRLSVNRLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLV 763

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++    L+T+ +  N I   G + L   +  +  +  + +    + DEGA+A AE L
Sbjct: 764 ARIIEECPKLRTVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEAL 823

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           K +  L  L L+ N I   G   LAEAL ENS +R   L  N      A  LA+ ++ N 
Sbjct: 824 KQHPRLTNLSLSANGITSKGGKCLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQANT 883

Query: 331 SLRELHLHGNSIGDEGIRALMSGLS 355
            L  L L  N    +GI+ L   L+
Sbjct: 884 GLLHLWLISNQFTVDGIKQLAEALT 908



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 40/271 (14%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
            + KL  +D+ NN+IS  G   V +   +   +  + L +N + D   E +A+ L +++ 
Sbjct: 688 HRQKLLGVDMDNNNISDYG---VKQLKPSFSKMTVVRLSVNRLSDSSIEVLAEELCKHKI 744

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  + L  N I   GA  +AR++++   + ++ +  N I + G + L+  ++   +I  +
Sbjct: 745 VEMLGLYNNEITDAGAKLVARIIEECPKLRTVKIGKNKITSVGGRYLASAIQKSTSIFDV 804

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            +    IG  GAE  A+ L+ +  ++ L L ANG+                         
Sbjct: 805 GMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITS----------------------- 841

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                    +G KCLA++ K  N  L    L  NE+ DD A  +A+ ++AN    +  L 
Sbjct: 842 ---------KGGKCLAEALKE-NSVLRIFWLVQNELTDDAAPHLAELVQAN--TGLLHLW 889

Query: 597 LANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
           L +N  T  G   L +A  L +  + KE+ +
Sbjct: 890 LISNQFTVDGIKQLAEA--LTHNTALKEICV 918



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 33/235 (14%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            LW+   +  I + G++ IA    +  T   I LG  +++S   +A+  VL+    +  +
Sbjct: 639 FLWM---LRCIFETGSKDIAQMTAKGITANLIKLGYCDVYSGDCTALNFVLQHRQKLLGV 695

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           D+  N I   G K L         +  ++L   ++  S  E +A+ L  +  + +L L  
Sbjct: 696 DMDNNNISDYGVKQLKPSF---SKMTVVRLSVNRLSDSSIEVLAEELCKHKIVEMLGLYN 752

Query: 509 NGLRD----------EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
           N + D          E C     +    + I S+              G + LA + +  
Sbjct: 753 NEITDAGAKLVARIIEECPKLRTVKIGKNKITSV--------------GGRYLASAIQK- 797

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + ++  + +  N I D+GA A A+ALK +    +T+L+L+ N +T  G   L +A
Sbjct: 798 STSIFDVGMWGNSIGDEGAEAFAEALKQHP--RLTNLSLSANGITSKGGKCLAEA 850


>gi|399497886|emb|CCG20271.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +D  G ++L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+K L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G SA+   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G  A    L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498


>gi|326432654|gb|EGD78224.1| hypothetical protein PTSG_12865 [Salpingoeca sp. ATCC 50818]
          Length = 1444

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 4/175 (2%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA A+ +N+T+  L L+ N+    GA ALA+GL+ NK++  L+LH NS+GD G  AL  
Sbjct: 3   ALAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALAD 62

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L+        +     SI  +G   +AE +K+  ++  + L  N IGDEG   +++ LK
Sbjct: 63  ALTHNTA----VTTACTSIGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLK 118

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            N TIT + LG N+I   GA A+A +LK N+ I  + +  N I   G  AL  V+
Sbjct: 119 HNMTITYLVLGNNSIGDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAALGAVM 173



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 3/138 (2%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+ +N IS +GA  +A+ +K+ K++  +NL+ N +GD GA  +ADAL  N  +TT    
Sbjct: 17  LDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALADALTHNTAVTT---A 73

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
             +I  +G  A+A +LK N+ IT+L L+ N IG +G  ALSE+LK +  I  L LG   I
Sbjct: 74  CTSIGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLKHNMTITYLVLGNNSI 133

Query: 484 GASGAEFVADMLRYNNTI 501
           G  GA+ +A+ML++N TI
Sbjct: 134 GDLGAKALAEMLKHNTTI 151



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 4/192 (2%)

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           ++ L   + DN  V RL LSS  +  EGA A+A+ LK+N  +  L L+ N +   G  +L
Sbjct: 1   MRALAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVAL 60

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A+AL  N+ + +        G  G  ALA+ L+ N ++  L L  NSIGDEG+ AL S +
Sbjct: 61  ADALTHNTAVTTA---CTSIGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVAL-SEM 116

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
                 +  L +GNNSI   GA  +AE +K+  +++ I +Y N I   G   +   + QN
Sbjct: 117 LKHNMTITYLVLGNNSIGDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAALGAVMDQN 176

Query: 415 RTITTIDLGGNN 426
           RT+  I +  N+
Sbjct: 177 RTLKCIYIEKNS 188



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA ++  N T   +  ++N I+  G  A    L+ N  +  LNL  N +GD G   L D 
Sbjct: 4   LAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALADA 63

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  V     +S+ L  EG  A+AE+LK+N+ +  L L++N I   G  +L+E L  N
Sbjct: 64  LTHNTAVT-TACTSIGL--EGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLKHN 120

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            TI  L L  N  G LGA ALA+ L+ N ++ E+ ++ NSI   G  AL + +   +  L
Sbjct: 121 MTITYLVLGNNSIGDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAALGAVMDQNR-TL 179

Query: 362 AVLDIGNNSISAKGAF 377
             + I  NS +   AF
Sbjct: 180 KCIYIEKNSPATARAF 195



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 26/190 (13%)

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +A A+K N T+T +DL  N+I  +GA+A+A+ LK N  I  L+L +N +G  GA AL++ 
Sbjct: 4   LAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALADA 63

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           L  +  + T       IG  G   +A+ML++N TI+ L L  N + DE            
Sbjct: 64  LTHNTAVTT---ACTSIGLEGTVALAEMLKHNTTITALFLSDNSIGDE------------ 108

Query: 527 SAIYSLKHMLFYSLCINYLQ---------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
             + +L  ML +++ I YL          GAK LA+  K  N  +  I +  N I   G 
Sbjct: 109 -GVVALSEMLKHNMTITYLVLGNNSIGDLGAKALAEMLK-HNTTIMEILVYTNSISPVGG 166

Query: 578 FAIAQALKAN 587
            A+   +  N
Sbjct: 167 AALGAVMDQN 176



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 3/183 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+    + +D+S  +   EG   LA+ L +N+T   ++   N +   G  A    L  N 
Sbjct: 9   KDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALADALTHNT 68

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A+ T   S   IG EG   L ++L  N  +  L LS   + DEG  A++E+LK+N  +  
Sbjct: 69  AVTTACTS---IGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLKHNMTITY 125

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L NN I   G  +LAE L  N+TI  + +  N    +G  AL   ++ N++L+ +++ 
Sbjct: 126 LVLGNNSIGDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAALGAVMDQNRTLKCIYIE 185

Query: 339 GNS 341
            NS
Sbjct: 186 KNS 188



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 10/169 (5%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K  +  + +++   + GD G   LA++L +N     V+ A   I   G  A   +L+ N 
Sbjct: 37  KHNKTIARLNLHWNSLGDVGAVALADALTHNTA---VTTACTSIGLEGTVALAEMLKHNT 93

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +  L LS N IGDEGV  L ++L  N  +  L L +  + D GAKA+AE+LK+N+ +  
Sbjct: 94  TITALFLSDNSIGDEGVVALSEMLKHNMTITYLVLGNNSIGDLGAKALAEMLKHNTTIME 153

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-------YGGALGAN 320
           + +  N I   G  +L   + +N T++ +++  N       +G AL  +
Sbjct: 154 ILVYTNSISPVGGAALGAVMDQNRTLKCIYIEKNSPATARAFGAALPVD 202



 Score = 39.7 bits (91), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N  +T +DL+ N I  +GA A+AQ LK N+ +A   LNL  N L   G  AL DA
Sbjct: 11  NTTVTRLDLSSNHISPEGAAALAQGLKHNKTIA--RLNLHWNSLGDVGAVALADA 63


>gi|326433997|gb|EGD79567.1| hypothetical protein PTSG_13043 [Salpingoeca sp. ATCC 50818]
          Length = 1170

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 2/217 (0%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+  DL DE    I   + NN+   V+ L    +   G  ++AEAL  N+ ++ L L G+
Sbjct: 16  LAQSDLEDEANDTI-RTIANNTCGDVVSLGFEGLGVDGARAVAEALRHNTCLKILDLIGS 74

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                GA ALAK L+ + +L+EL L  N+I ++G RAL   L      L  LD+ +NSIS
Sbjct: 75  AIAEKGAVALAKILKHDATLKELILRKNAICNDGARALALML-KHNSTLTSLDLSHNSIS 133

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA  + + +++  SL  ++L  N I D GAE +A+ LK N  I  +DL  N+I   G 
Sbjct: 134 DHGAEELGQMLQHNTSLKELDLNNNRISDVGAEVLAEMLKHNTAIRNLDLRKNSIGFNGV 193

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           +A+  +LK N  IT+L+L+ + +       + E+L++
Sbjct: 194 AALVVMLKHNMTITNLNLSEHCLTEREVLGVLELLQY 230



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           ++  N   + VS    G+   G +A    L+ N  LK L+L G+ I ++G   L  IL  
Sbjct: 31  TIANNTCGDVVSLGFEGLGVDGARAVAEALRHNTCLKILDLIGSAIAEKGAVALAKILKH 90

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           +A ++ L L    + ++GA+A+A +LK+NS L  L+L++N I   G   L + L  N+++
Sbjct: 91  DATLKELILRKNAICNDGARALALMLKHNSTLTSLDLSHNSISDHGAEELGQMLQHNTSL 150

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           + L LN N    +GA  LA+ L+ N ++R L L  NSIG  G+ AL+  L      +  L
Sbjct: 151 KELDLNNNRISDVGAEVLAEMLKHNTAIRNLDLRKNSIGFNGVAALVVMLKHNM-TITNL 209

Query: 365 DIGNNSISAK---GAFHVAEY------IKNCKSLL 390
           ++  + ++ +   G   + +Y      I+ CK +L
Sbjct: 210 NLSEHCLTEREVLGVLELLQYVHTKAKIRLCKPVL 244



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 9/172 (5%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           V+ +G   +   GA  VAE +++   L  ++L  + I ++GA  +A  LK + T+  + L
Sbjct: 40  VVSLGFEGLGVDGARAVAEALRHNTCLKILDLIGSAIAEKGAVALAKILKHDATLKELIL 99

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I + GA A+A +LK NS +TSLDL++N I   GA+ L ++L+ + ++  L L   +
Sbjct: 100 RKNAICNDGARALALMLKHNSTLTSLDLSHNSISDHGAEELGQMLQHNTSLKELDLNNNR 159

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           I   GAE +A+ML++N  I  LDLR N +      G NG++   + +  LKH
Sbjct: 160 ISDVGAEVLAEMLKHNTAIRNLDLRKNSI------GFNGVA---ALVVMLKH 202



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 124/238 (52%), Gaps = 24/238 (10%)

Query: 294 LAEALLE---NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           LA++ LE   N TIR++  N   G     + ++ G EG             +G +G RA+
Sbjct: 16  LAQSDLEDEANDTIRTI-ANNTCG-----DVVSLGFEG-------------LGVDGARAV 56

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L      L +LD+  ++I+ KGA  +A+ +K+  +L  + L  N I ++GA  +A  
Sbjct: 57  AEALRHNTC-LKILDLIGSAIAEKGAVALAKILKHDATLKELILRKNAICNDGARALALM 115

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK N T+T++DL  N+I   GA  + ++L+ N+ +  LDL  N I   GA+ L+E+LK +
Sbjct: 116 LKHNSTLTSLDLSHNSISDHGAEELGQMLQHNTSLKELDLNNNRISDVGAEVLAEMLKHN 175

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCSGCNGLSFFHS 527
             I  L L    IG +G   +  ML++N TI+ L+L  + L + EV      L + H+
Sbjct: 176 TAIRNLDLRKNSIGFNGVAALVVMLKHNMTITNLNLSEHCLTEREVLGVLELLQYVHT 233



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V +     G +G   +AE+L +N   + +    + I   G  A   +L+ +  LK L L 
Sbjct: 41  VSLGFEGLGVDGARAVAEALRHNTCLKILDLIGSAIAEKGAVALAKILKHDATLKELILR 100

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I ++G + L  +L  N+ +  L LS   + D GA+ + ++L++N+ L+ L+LNNN I
Sbjct: 101 KNAICNDGARALALMLKHNSTLTSLDLSHNSISDHGAEELGQMLQHNTSLKELDLNNNRI 160

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   LAE L  N+ IR+L L  N  G  G  AL   L+ N ++  L+L  + + +  
Sbjct: 161 SDVGAEVLAEMLKHNTAIRNLDLRKNSIGFNGVAALVVMLKHNMTITNLNLSEHCLTERE 220

Query: 347 IRALMSGL 354
           +  ++  L
Sbjct: 221 VLGVLELL 228



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 35/213 (16%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L    +G +GA  +A+AL+ N  +  +DL G+ I  KGA A+A++LK ++ +  L L 
Sbjct: 41  VSLGFEGLGVDGARAVAEALRHNTCLKILDLIGSAIAEKGAVALAKILKHDATLKELILR 100

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I  DGA+AL                            A ML++N+T++ LDL  N +
Sbjct: 101 KNAICNDGARAL----------------------------ALMLKHNSTLTSLDLSHNSI 132

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            D    G   L        SLK +   +  I+ + GA+ LA+  K  N A+ ++DL  N 
Sbjct: 133 SDH---GAEELGQMLQHNTSLKELDLNNNRISDV-GAEVLAEMLK-HNTAIRNLDLRKNS 187

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
           I  +G  A+   LK N  + +T+LNL+ + LT+
Sbjct: 188 IGFNGVAALVVMLKHN--MTITNLNLSEHCLTE 218



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +S+D+S  +  D G   L + L +N + +E+    N I+  G +    +L+ N A++ L
Sbjct: 122 LTSLDLSHNSISDHGAEELGQMLQHNTSLKELDLNNNRISDVGAEVLAEMLKHNTAIRNL 181

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           +L  N IG  GV  L  +L  N  +  L LS   L +     + ELL+
Sbjct: 182 DLRKNSIGFNGVAALVVMLKHNMTITNLNLSEHCLTEREVLGVLELLQ 229


>gi|432119361|gb|ELK38439.1| Protein NLRC5 [Myotis davidii]
          Length = 1522

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 140/297 (47%), Gaps = 9/297 (3%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +   G+  L   L     +E L LS+  L +E +  +A  LK  S LR L+
Sbjct: 1177 KTFRLASSCVSSGGLAPLASGLSRCRHLEELDLSNNQLGEEASTVLAGALKGRSWLRRLD 1236

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++  +D S    LA+ L   + ++SL L+G+  G +G + LAK LE   SL EL L  N
Sbjct: 1237 LSHFPLDDSTLAVLAQGLSHMTRLQSLCLSGDDIGDVGCSCLAKALEAATSLEELGLSHN 1296

Query: 341  SIGDEG---IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             IGD G   + A++ GL     +L  +D+  N I   G   + E +  CK L  + L  N
Sbjct: 1297 QIGDAGAQHLAAVLPGLP----ELRRVDLSANGICPAGGVRLVESLALCKHLEELILSAN 1352

Query: 398  DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
             I   G  ++ ++L   + +  + LG N +    A  +AR L  +  +  L L  + +G 
Sbjct: 1353 GICPAGGVRLVESLALCKHLEELMLGCNALGDPTALELARALPPH--LRVLHLRSSRLGP 1410

Query: 458  DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +GA +L   L    ++  + L  C+I    A+ +A        +  + L  N L DE
Sbjct: 1411 EGALSLGRALDGCPHLEEISLVSCEIDDQAAKLLAASFMLCPALEEILLSWNLLGDE 1467



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 131/318 (41%), Gaps = 31/318 (9%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R    +D+S    G+E    LA +L        +  +   +  + +      L     L+
Sbjct: 1202 RHLEELDLSNNQLGEEASTVLAGALKGRSWLRRLDLSHFPLDDSTLAVLAQGLSHMTRLQ 1261

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +L LSG+ IGD G  CL   L     +E L LS   + D GA+ +A +L     LR ++L
Sbjct: 1262 SLCLSGDDIGDVGCSCLAKALEAATSLEELGLSHNQIGDAGAQHLAAVLPGLPELRRVDL 1321

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            + N I  +G   L E+L     +  L L+ N     G   L + L   K L EL L  N+
Sbjct: 1322 SANGICPAGGVRLVESLALCKHLEELILSANGICPAGGVRLVESLALCKHLEELMLGCNA 1381

Query: 342  IGD----EGIRALMSGL------SSRKGKLAVLDIG---------------NNSISAKGA 376
            +GD    E  RAL   L      SSR G    L +G               +  I  + A
Sbjct: 1382 LGDPTALELARALPPHLRVLHLRSSRLGPEGALSLGRALDGCPHLEEISLVSCEIDDQAA 1441

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              +A     C +L  I L  N +GDE A ++A  L + + + ++DL  N++    A  + 
Sbjct: 1442 KLLAASFMLCPALEEILLSWNLLGDEAAAELAQVLPRMQRLKSVDLWNNHVPPDAAQRL- 1500

Query: 437  RVLKDNSVITSLDLAYNP 454
                  S    LD ++ P
Sbjct: 1501 -----QSQEPRLDFSFFP 1513



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 151/359 (42%), Gaps = 14/359 (3%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            + +L LS V L     + +   L   S L+   L ++ +   G   LA  L     +  L
Sbjct: 1148 LRQLSLSQVTLCHASCQLLQSSLLPLSELKTFRLASSCVSSGGLAPLASGLSRCRHLEEL 1207

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
             L+ N  G   +  LA  L+G   LR L L    + D  +  L  GLS    +L  L + 
Sbjct: 1208 DLSNNQLGEEASTVLAGALKGRSWLRRLDLSHFPLDDSTLAVLAQGLSHMT-RLQSLCLS 1266

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
             + I   G   +A+ ++   SL  + L  N IGD GA+ +A  L     +  +DL  N I
Sbjct: 1267 GDDIGDVGCSCLAKALEAATSLEELGLSHNQIGDAGAQHLAAVLPGLPELRRVDLSANGI 1326

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
               G   +   L     +  L L+ N I   G   L E L    ++  L LG   +G   
Sbjct: 1327 CPAGGVRLVESLALCKHLEELILSANGICPAGGVRLVESLALCKHLEELMLGCNALGDPT 1386

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL--CINYL 545
            A  +A  L  +  + +L LR++ L      G  G      A+    H+   SL  C    
Sbjct: 1387 ALELARALPPH--LRVLHLRSSRL------GPEGALSLGRALDGCPHLEEISLVSCEIDD 1438

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            Q AK LA SF ++  AL  I L++N + D+ A  +AQ L   +   + S++L NN +  
Sbjct: 1439 QAAKLLAASF-MLCPALEEILLSWNLLGDEAAAELAQVLPRMQR--LKSVDLWNNHVPP 1494



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 34/280 (12%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +++ F    +T A + A   VL        L+  G P+     +C  + L     VE L+
Sbjct: 713 DQLPFHNFPLTYADLAALTSVLGHREVPIHLDFEGCPLEP---RCP-EALAGCGRVESLR 768

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH---- 308
           L+   +   G   + + L     L  + L++N +  +    L EA +   TIR L     
Sbjct: 769 LAGSKITARGIYHLVQALPLCPHLEEVSLSHNHVSMATLLGLTEAAVTCPTIRMLQVREA 828

Query: 309 ---------------LNGNYGGAL---GANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
                          L G     L       L   L     L E+ L GN + DEG R L
Sbjct: 829 DLIILLSPPTETAAELPGLQKCCLTVRDVEMLIAQLREGPLLEEVDLSGNQLEDEGCR-L 887

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-----AE 405
           ++  + +      LD+ +N +S  G   V   +  C++L   +L+++   D G      E
Sbjct: 888 VAEAAPQLHIAGKLDLSDNGLSVAGLPWVLRAVSMCQNL--ADLHISRFTDCGLSQMHVE 945

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            + + L++   ++ +DL GN+I  +GA  +   L     I
Sbjct: 946 PLCELLRKCEDLSQLDLSGNSISQEGALCLVETLPSCPRI 985



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 103/229 (44%), Gaps = 14/229 (6%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+ ++G      G++ L ++L      EEVS + N ++ A +    G+ ++ +   T+ +
Sbjct: 766 SLRLAGSKITARGIYHLVQALPLCPHLEEVSLSHNHVSMATLL---GLTEAAVTCPTIRM 822

Query: 226 SGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
               + +  +  L     + A  +  LQ   + +RD   + +   L+   +L  ++L+ N
Sbjct: 823 LQ--VREADLIILLSPPTETAAELPGLQKCCLTVRD--VEMLIAQLREGPLLEEVDLSGN 878

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            ++  G   +AEA  +      L L+ N     G   + + +   ++L +LH+  +   D
Sbjct: 879 QLEDEGCRLVAEAAPQLHIAGKLDLSDNGLSVAGLPWVLRAVSMCQNLADLHI--SRFTD 936

Query: 345 EGIRAL----MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            G+  +    +  L  +   L+ LD+  NSIS +GA  + E + +C  +
Sbjct: 937 CGLSQMHVEPLCELLRKCEDLSQLDLSGNSISQEGALCLVETLPSCPRI 985



 Score = 39.3 bits (90), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 76/197 (38%), Gaps = 39/197 (19%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
               VD+SG    DEG   +AE+      A ++  + NG++ AG+            L+ +
Sbjct: 870  LEEVDLSGNQLEDEGCRLVAEAAPQLHIAGKLDLSDNGLSVAGLP---------WVLRAV 920

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            ++  N         L D+ +        + +   L     + + ELL+    L  L+L+ 
Sbjct: 921  SMCQN---------LADLHIS-------RFTDCGLSQMHVEPLCELLRKCEDLSQLDLSG 964

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA-----LAKGLEGNKSLRELHLH 338
            N I   G   L E L     IR   +N      LGA        ++  E  K+LR   L 
Sbjct: 965  NSISQEGALCLVETLPSCPRIREAAVN------LGAEQSFRIHFSRQEEAGKTLR---LR 1015

Query: 339  GNSIGDEGIRALMSGLS 355
              S   E +  L +GLS
Sbjct: 1016 ECSFRPEHVPRLAAGLS 1032


>gi|356535989|ref|XP_003536523.1| PREDICTED: RAN GTPase-activating protein 1-like [Glycine max]
          Length = 534

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 154/307 (50%), Gaps = 32/307 (10%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   L+ ++ L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA++EL
Sbjct: 207 FSSALEGSV-LRYLNLSNNAMGEKGVRAFRSLLKSQINLEELYLMNDGISEEAAKAVSEL 265

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L +   LRVL  +NNM    G  ++AE +  +  +     +    G+ G  AL + L   
Sbjct: 266 LPSTEKLRVLHFHNNMTGDEGAIAIAEIVKRSPALEDFRCSSTRVGSDGGVALVEALGDC 325

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K LR+L L  N  G+E      +G++  K   A  D+    +S                 
Sbjct: 326 KHLRKLDLRDNMFGEE------AGVALSKVVPAFTDLTEIYLS----------------- 362

Query: 390 LWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
                Y+N + D+GAE +A+ALK++  ++  +DL GN+I +K A+++A  +     +T L
Sbjct: 363 -----YLN-LEDDGAEALANALKESAPSLEILDLAGNDITAKAAASVAACISSKQFLTKL 416

Query: 449 DLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           +L+ N +  +G   +S+ L+  HG +  + L    I  SGA+ VA+ +       +L++ 
Sbjct: 417 NLSENELKDEGVVLISKALEGGHGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKLLNIN 476

Query: 508 ANGLRDE 514
           AN + DE
Sbjct: 477 ANFISDE 483



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S I L+ L L  + I +E  K + ++L     +  L   
Sbjct: 219 LNLSNNAMGEKGVRAFRSLLKSQINLEELYLMNDGISEEAAKAVSELLPSTEKLRVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K +  L     ++  +   G  +L EAL +   +R L L  N  
Sbjct: 279 NNMTGDEGAIAIAEIVKRSPALEDFRCSSTRVGSDGGVALVEALGDCKHLRKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K +     L E++L   ++ D+G  AL + L      L +LD+  N I+AK
Sbjct: 339 GEEAGVALSKVVPAFTDLTEIYLSYLNLEDDGAEALANALKESAPSLEILDLAGNDITAK 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGAS 433
            A  VA  I + + L  +NL  N++ DEG   I+ AL+     +  +DL  N+I   GA 
Sbjct: 399 AAASVAACISSKQFLTKLNLSENELKDEGVVLISKALEGGHGQLIEVDLSTNSITWSGAK 458

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +A  +        L++  N I  +G   L  + K
Sbjct: 459 LVAEAVVGKPGFKLLNINANFISDEGIDELKNIFK 493



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 142/288 (49%), Gaps = 13/288 (4%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +  LEG+  LR L+L  N++G++G+RA  S L S+   L  L + N+ IS + A  V+E
Sbjct: 207 FSSALEGS-VLRYLNLSNNAMGEKGVRAFRSLLKSQIN-LEELYLMNDGISEEAAKAVSE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + + + L  ++ + N  GDEGA  IA+ +K++  +         + S G  A+   L D
Sbjct: 265 LLPSTEKLRVLHFHNNMTGDEGAIAIAEIVKRSPALEDFRCSSTRVGSDGGVALVEALGD 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
              +  LDL  N  G +   ALS+V+    ++  + L +  +   GAE +A+ L+ +  +
Sbjct: 325 CKHLRKLDLRDNMFGEEAGVALSKVVPAFTDLTEIYLSYLNLEDDGAEALANALKESAPS 384

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVV 558
           + ILDL  N +  +  +         + I S + +   +L  N L  +G   ++++ +  
Sbjct: 385 LEILDLAGNDITAKAAASV------AACISSKQFLTKLNLSENELKDEGVVLISKALEGG 438

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           +  L  +DL+ N I   GA  +A+A+       +  LN+  NF++  G
Sbjct: 439 HGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKL--LNINANFISDEG 484



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 27/238 (11%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G  A    L     L+ L+L  N  G+E 
Sbjct: 283 GDEGAIAIAEIVKRSPALEDFRCSSTRVGSDGGVALVEALGDCKHLRKLDLRDNMFGEEA 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
              L  ++     +  + LS ++L D+GA+A+A  LK ++                    
Sbjct: 343 GVALSKVVPAFTDLTEIYLSYLNLEDDGAEALANALKESA-------------------- 382

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
                   ++  L L GN   A  A ++A  +   + L +L+L  N + DEG+  +   L
Sbjct: 383 -------PSLEILDLAGNDITAKAAASVAACISSKQFLTKLNLSENELKDEGVVLISKAL 435

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
               G+L  +D+  NSI+  GA  VAE +        +N+  N I DEG +++ +  K
Sbjct: 436 EGGHGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKLLNINANFISDEGIDELKNIFK 493


>gi|156321262|ref|XP_001618237.1| hypothetical protein NEMVEDRAFT_v1g155247 [Nematostella vectensis]
 gi|156198145|gb|EDO26137.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 120/223 (53%), Gaps = 4/223 (1%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           TSL ++L  NST+ ++H++ N  G   A+ LAK LE N SL ++ + G  +GD G+ ++ 
Sbjct: 3   TSLFKSLKNNSTLSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIA 62

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L      +  L I  ++++ +    + E  ++  ++  ++L+   IGD GA+ IA  L
Sbjct: 63  EALIVNT-TVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGL 121

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
            QN T+  I +    I + G SA+A+V+++    T LDL+ N IG  GAKA+++V++   
Sbjct: 122 SQNTTLEKIQIENAGIGATGVSALAKVIQN---ATHLDLSRNIIGTKGAKAIAKVIENSC 178

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +  L++  C I   G   +A  L  N  +  L +   G+ DE
Sbjct: 179 KLKYLRIDRCNIDVLGVRDIAKALSKNTNLEELSVACAGIDDE 221



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 4/242 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L  +++  N +GD     L  +L  N  +  + +    L D G  +IAE L  N
Sbjct: 9   LKNNSTLSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVN 68

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +R L +  + +      +L E    N+TI  L L     G  GA  +A GL  N +L 
Sbjct: 69  TTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLE 128

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           ++ +    IG  G+ AL   + +       LD+  N I  KGA  +A+ I+N   L ++ 
Sbjct: 129 KIQIENAGIGATGVSALAKVIQNATH----LDLSRNIIGTKGAKAIAKVIENSCKLKYLR 184

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +   +I   G   IA AL +N  +  + +    I  +G   +AR +  N  +  L + YN
Sbjct: 185 IDRCNIDVLGVRDIAKALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYN 244

Query: 454 PI 455
            I
Sbjct: 245 NI 246



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 7/220 (3%)

Query: 156 EFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L   +S++   + G   GD G+  +AE+L  N T   +    + +T    +A   
Sbjct: 32  ELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGE 91

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           + + N  +  L+L    IGD G + +   L  N  +E++Q+ +  +   G  A+A++++N
Sbjct: 92  MFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIENAGIGATGVSALAKVIQN 151

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            +    L+L+ N+I   G  ++A+ +  +  ++ L ++      LG   +AK L  N +L
Sbjct: 152 AT---HLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDRCNIDVLGVRDIAKALSKNTNL 208

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            EL +    I DEG+  L   ++  K  L VL I  N+IS
Sbjct: 209 EELSVACAGIDDEGMCELARSVAKNK-SLQVLTITYNNIS 247



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 113/238 (47%), Gaps = 4/238 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++ +   + GD     LA+ L  N +  +V      +  AG+ +    L  N  ++TL
Sbjct: 15  LSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVNTTVRTL 74

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            + G+ +  E  + L ++   N  +  L L    + D GA+ IA  L  N+ L  +++ N
Sbjct: 75  GIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIEN 134

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             I  +G ++LA+ +++N+T   L L+ N  G  GA A+AK +E +  L+ L +   +I 
Sbjct: 135 AGIGATGVSALAK-VIQNAT--HLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDRCNID 191

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
             G+R +   L S+   L  L +    I  +G   +A  +   KSL  + +  N+I +
Sbjct: 192 VLGVRDIAKAL-SKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNNISE 248



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 12/210 (5%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN  +L  I+++ N +GD  A ++A  L+ N ++  + +GG  +   G ++IA  L  N
Sbjct: 9   LKNNSTLSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVN 68

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + + +L +  + +  +  +AL E+ + +  I  L L   +IG SGA+ +A  L  N T+ 
Sbjct: 69  TTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLE 128

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            + +   G+      G  G+S     I +  H L  S  I   +GAK +A   KV+  + 
Sbjct: 129 KIQIENAGI------GATGVSALAKVIQNATH-LDLSRNIIGTKGAKAIA---KVIENSC 178

Query: 563 TSIDLAFNEIRDD--GAFAIAQALKANEDV 590
               L  +    D  G   IA+AL  N ++
Sbjct: 179 KLKYLRIDRCNIDVLGVRDIAKALSKNTNL 208



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 37/279 (13%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +L K L+ N +L  +H+H NS+GD    A  S L+       VL++   + S    F   
Sbjct: 4   SLFKSLKNNSTLSAIHIHFNSLGD----ACASELAK------VLEV---NTSLNDVFIGG 50

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           EY+                GD G   IA+AL  N T+ T+ + G+N+  +   A+  + +
Sbjct: 51  EYL----------------GDAGVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGEMFR 94

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ IT L L +  IG  GA+ ++  L  +  +  +++    IGA+G   +A +++    
Sbjct: 95  HNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIENAGIGATGVSALAKVIQ---N 151

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
            + LDL  N +  +   G   ++        LK++      I+ L G + +A++    N 
Sbjct: 152 ATHLDLSRNIIGTK---GAKAIAKVIENSCKLKYLRIDRCNIDVL-GVRDIAKALS-KNT 206

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            L  + +A   I D+G   +A+++  N+ + V ++   N
Sbjct: 207 NLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNN 245



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 3/164 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + L E  +     + + +     GD G   +A  L  N T E++     GI A G+ 
Sbjct: 84  EAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIENAGIGATGVS 143

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   V+Q+      L+LS N IG +G K +  ++ ++  ++ L++   ++   G + IA+
Sbjct: 144 ALAKVIQN---ATHLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDRCNIDVLGVRDIAK 200

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N+ L  L +    ID  G   LA ++ +N +++ L +  N
Sbjct: 201 ALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYN 244


>gi|395832442|ref|XP_003789280.1| PREDICTED: T-complex-associated testis-expressed protein 1
           [Otolemur garnettii]
          Length = 497

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  +  L EL L  
Sbjct: 253 EWNLFLFTYRDCHSLAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDHPVLEELDLSH 312

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  SL+ +NL +N I
Sbjct: 313 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTSLISLNLRLNCI 370

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL  N+ +TT+ LGGN +    A+ +A+VL  N+ +TS++L+ N IG DG
Sbjct: 371 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLAQVLSTNTTLTSINLSCNHIGLDG 430

Query: 460 AKALSE 465
            K L E
Sbjct: 431 GKQLLE 436



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 2/204 (0%)

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             +++ + LK   L+ + + D+  + L   L+D+  +E L LS   + D GA+  A+LL 
Sbjct: 269 ATIKACLTLKIFRLTRSKVDDDKARILIRSLLDHPVLEELDLSHNLIGDRGARGAAKLL- 327

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           ++S LRVL L NN +   G  SLA AL  N+++ SL+L  N     G  ALA  L  NK 
Sbjct: 328 SHSRLRVLNLANNQVRAPGAQSLAHALAHNTSLISLNLRLNCIEDEGGQALAHALHTNKC 387

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  LHL GN +  E    L++ + S    L  +++  N I   G   + E + + K+LL 
Sbjct: 388 LTTLHLGGNELS-EPTATLLAQVLSTNTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLE 446

Query: 392 INLYMNDIGDEGAEKIADALKQNR 415
            +L ++D+  E    I  AL  NR
Sbjct: 447 FDLRLSDVAQESEYLIGQALNANR 470



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 11/218 (5%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           RL  S VD  D+ A+ +   L ++ +L  L+L++N+I   G    A+ LL +S +R L+L
Sbjct: 281 RLTRSKVD--DDKARILIRSLLDHPVLEELDLSHNLIGDRGARGAAK-LLSHSRLRVLNL 337

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N SL  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 338 ANNQVRAPGAQSLAHALAHNTSLISLNLRLNCIEDEGGQALAHALHTNKC-LTTLHLGGN 396

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +A+ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 397 ELSEPTATLLAQVLSTNTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 456

Query: 430 KGASAIARVLKDN------SVITSLDLAYNPIGADGAK 461
           +    I + L  N        +  +    +PI ADG +
Sbjct: 457 ESEYLIGQALNANREAARQRALNPIQF-MSPITADGPE 493



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    L  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 289 DDKARILIRSLLDHPVLEELDLSHNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 347

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L  N  L  L L  N +     T LA
Sbjct: 348 QSLAHALAHNTSLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLA 407

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 408 QVLSTNTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 457



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA  
Sbjct: 264 CHSLAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDHP-VLEELDLSHNLIGDRGARG 322

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N ++ +++L  N I  +G  A+A  
Sbjct: 323 AAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTSLISLNLRLNCIEDEGGQALAHA 381

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N  +T+L L  N +    A  L++VL  +  + ++ L    IG  G + + + +  N
Sbjct: 382 LHTNKCLTTLHLGGNELSEPTATLLAQVLSTNTTLTSINLSCNHIGLDGGKQLLEGMSDN 441

Query: 499 NTISILDLRANGLRDE 514
            T+   DLR + +  E
Sbjct: 442 KTLLEFDLRLSDVAQE 457



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 44/247 (17%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 245 VKDCGMNFEWNLFLFTYRD--CHSLAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDH 302

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N ++ 
Sbjct: 303 PVLEELDLSHNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTSLI 361

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            L+LR N + DE                                G + LA +    N+ L
Sbjct: 362 SLNLRLNCIEDE--------------------------------GGQALAHALHT-NKCL 388

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 622
           T++ L  NE+ +  A  +AQ L  N    +TS+NL+ N +       L   K L+  MS+
Sbjct: 389 TTLHLGGNELSEPTATLLAQVLSTN--TTLTSINLSCNHI------GLDGGKQLLEGMSD 440

Query: 623 KEVNIFF 629
            +  + F
Sbjct: 441 NKTLLEF 447


>gi|296209319|ref|XP_002751479.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Callithrix jacchus]
          Length = 957

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   K  L  L +G N I+++G  
Sbjct: 748 GVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKS-LTHLKLGKNKITSEGGK 806

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 807 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 866

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 867 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 926

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 927 NTGITEICLNGNLIKPE 943



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 40/256 (15%)

Query: 343 GDEGIRALMSGLS--SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           G + +R   S L+  S   +L+V     N I+  G   ++E +   K + ++ LY N I 
Sbjct: 719 GVQELRPCFSRLTVISEAARLSV-----NQITDGGVKVLSEELTKYKIVTFLGLYNNQIT 773

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D GA  I   L + +++T + LG N I S+G   +A  +K++  I+ + +  N +G +GA
Sbjct: 774 DVGARYITKILDECKSLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGA 833

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
           KA +E L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DEV     
Sbjct: 834 KAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEV----- 888

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
                                      A+ LA+  K VN+ L  + L  N+I   G   +
Sbjct: 889 ---------------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQL 920

Query: 581 AQALKANEDVAVTSLN 596
           A AL+ N  +    LN
Sbjct: 921 ADALQNNTGITEICLN 936



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 29/230 (12%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           E  +LS   + D G K ++E L    I+  L L NN I   G   + + L E  ++  L 
Sbjct: 735 EAARLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLK 794

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L  N   + G   LA  ++ +KS+ ++ + GN +GDEG +A                   
Sbjct: 795 LGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAF------------------ 836

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
                      AE ++N  SL  ++L  N +  EG + +A AL+QN ++  + L  N ++
Sbjct: 837 -----------AEALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELN 885

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            + A ++A +LK N  +  L L  N I A G   L++ L+ +  I  + L
Sbjct: 886 DEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICL 935



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L    +L  L L  N
Sbjct: 739 LSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGKN 798

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N +  
Sbjct: 799 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 858

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 859 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 918

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L +  G   +   GN
Sbjct: 919 QLADALQNNTGITEICLNGN 938



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 3/192 (1%)

Query: 157 FAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            ++EL  +  V   G       D G  ++ + L   ++   +    N IT+ G K     
Sbjct: 752 LSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGKNKITSEGGKCLALA 811

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+ N
Sbjct: 812 VKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQQN 871

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  + 
Sbjct: 872 TSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGIT 931

Query: 334 ELHLHGNSIGDE 345
           E+ L+GN I  E
Sbjct: 932 EICLNGNLIKPE 943



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 29/241 (12%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           +E    + N IT  G+K     L     +  L L  N I D G + +  IL +   +  L
Sbjct: 734 SEAARLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHL 793

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           +L    +  EG K +A  +KN+  +  + +  N +   G  + AEAL  + ++ +L L  
Sbjct: 794 KLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLAS 853

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N     G  +LA+ L+ N SL  L L  N + DE   +L                     
Sbjct: 854 NGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESL--------------------- 892

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
                   AE +K  ++L  + L  N I  +G  ++ADAL+ N  IT I L GN I  + 
Sbjct: 893 --------AEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGNLIKPEE 944

Query: 432 A 432
           A
Sbjct: 945 A 945



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 35/220 (15%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L +N I D G + +++ L + + +T + L  N I   GA  I ++L +   +T L L  N
Sbjct: 739 LSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGKN 798

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            I ++G K L+  +K   +I+ + +   Q+G  GA+  A+ LR + +++ L L +NG+  
Sbjct: 799 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 858

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           E                                G K LA++ +  N +L  + L  NE+ 
Sbjct: 859 E--------------------------------GGKSLARALQQ-NTSLEILWLTQNELN 885

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           D+ A ++A+ LK N+   +  L L  N +T  G + L DA
Sbjct: 886 DEVAESLAEMLKVNQ--TLKHLWLIQNQITAKGTAQLADA 923



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 799 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 858

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 859 EGGKSLARALQQNTSLEILWLTQN----------------------------ELNDEVAE 890

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 891 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 938


>gi|29838751|gb|AAN52938.1| NOD2 [Mus spretus]
          Length = 1013

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 9/252 (3%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKN 272
            LQ  +AL+   L  N +GD GV+ L   L    GV   L L   ++ D GA  + E    
Sbjct: 762  LQRPVALQ---LDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGACTLVECALR 814

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
               L+ L L NN +  +   S+A+ L       SL +  N+  A GA  LA+GL+ N SL
Sbjct: 815  CEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSL 874

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            + L   GNS+GD+G +AL   ++  +  L  L +  N+I + GA  +A  ++  KSL  +
Sbjct: 875  KFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIGSMGAQALALMLEKNKSLEEL 933

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
             L  N I DEG   +A+ LK+N T+  + L  N I  +GA A+ + L  NS I  + L  
Sbjct: 934  CLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRG 993

Query: 453  NPIGADGAKALS 464
            N    +  + LS
Sbjct: 994  NTFSLEEIQTLS 1005



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 4/209 (1%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
            TL E A        + +      D     +A+ L + Q    +    N ITAAG +    
Sbjct: 807  TLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQ 866

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
             L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+ 
Sbjct: 867  GLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEK 926

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N ++
Sbjct: 927  NKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             E+ L GN+   E I+     LSSR  +L
Sbjct: 987  LEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +LK+      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754 ALAFVLKHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGACTLVE 810

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811 CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870 SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930 LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505 DLRAN 509
            LR N
Sbjct: 990 WLRGN 994



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+  +    I  L L     G     ALA  L+  +    L L  NS+GD G+  L   
Sbjct: 727 LAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLKHLQRPVALQLDYNSVGDVGVEQLRPC 786

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A  L  
Sbjct: 787 L----GVCTALYLRDNNISDRGACTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAH 842

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+  H N+
Sbjct: 843 KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNL 902

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 903 KWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDE 943



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|6708468|gb|AAF25948.1|AF214560_1 RAN GTPase activating protein 2 [Arabidopsis thaliana]
          Length = 545

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 30/288 (10%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   LQ +I L +LNLS N +G++GV+    +L   + +E L L +  +  E A+A++EL
Sbjct: 207 FSDALQGSI-LSSLNLSDNALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSEL 265

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEA-----LLEN----------------------- 301
           + +   LRVL  +NNM    G  ++AE      LLEN                       
Sbjct: 266 IPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHC 325

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           + +  L L  N  G     +L+K L   K + EL+L   ++ DEG  A+++ L      +
Sbjct: 326 THMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPI 385

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTI 420
            VL++  N I+ + A  +A  +   + L  +NL  N++ DEG  +IA+ +++ N  +  I
Sbjct: 386 EVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEVNSKLQYI 445

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           D+  N I   GA A+A V+        L++  N I  +G + L E+ K
Sbjct: 446 DMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFK 493



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 143/299 (47%), Gaps = 19/299 (6%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRA---LMSGLSSRKGKLAVLDIGNNSISAKGA 376
           N  +  L+G+  L  L+L  N++G++G+RA   L+  LSS    L  L + N+ IS + A
Sbjct: 205 NIFSDALQGS-ILSSLNLSDNALGEKGVRAFGALLKSLSS----LEELYLMNDGISKEAA 259

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             V+E I + ++L  ++ + N  GDEGA  IA+ +K++  +         + SKG  A++
Sbjct: 260 QAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALS 319

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L+  + +  LDL  N  G +   +LS+ L    ++  L L +  +   GA  + + L+
Sbjct: 320 EALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALK 379

Query: 497 YN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--LAQ 553
            + + I +L++  N +  E  S           +  L      +L  N L+   C  +A 
Sbjct: 380 ESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKL------NLSENELKDEGCVQIAN 433

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             + VN  L  ID++ N IR  GA A+A  +   E  A   LN+  N +++ G   L +
Sbjct: 434 CIEEVNSKLQYIDMSTNYIRRAGARALAHVVVKKE--AFKLLNIDGNIISEEGIEELKE 490



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 3/245 (1%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ Q ++E          +       GDEG   +AE +  +   E    ++  + + G 
Sbjct: 256 KEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGG 315

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L+    ++ L+L  N  G E    L   L     +  L LS ++L DEGA AI 
Sbjct: 316 IALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIV 375

Query: 268 ELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK + S + VLE+  N I     +++A  +     +  L+L+ N     G   +A  +
Sbjct: 376 NALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCI 435

Query: 327 EG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           E  N  L+ + +  N I   G RAL + +  +K    +L+I  N IS +G   + E  K 
Sbjct: 436 EEVNSKLQYIDMSTNYIRRAGARAL-AHVVVKKEAFKLLNIDGNIISEEGIEELKEIFKK 494

Query: 386 CKSLL 390
              LL
Sbjct: 495 SPELL 499


>gi|432091961|gb|ELK24767.1| NACHT, LRR and PYD domains-containing protein 14 [Myotis davidii]
          Length = 547

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 16/275 (5%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G    A  L  N++L  L L G+ IGD G+++L   L     KL  L + + S++     
Sbjct: 171 GCQNFANCLIHNQNLLHLDLKGSDIGDGGVKSLCEALRHPDCKLQNLSLESCSLTTLCCL 230

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIA 436
           ++++ +    SL+++NL  N+I D+G E + +AL+  N  +  + L    +   G   ++
Sbjct: 231 NISKILIRSHSLIFLNLSTNNILDDGVELLCEALRHPNCHLERLSLESCGLTVAGCEDLS 290

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADML 495
             L +N  +T L LA N +G  G K LS+VLK     + +L L  C   +   E ++  L
Sbjct: 291 LALINNKGLTHLCLADNILGDGGVKLLSDVLKHPQCTLQSLVLRRCHFTSGSCEHLSSSL 350

Query: 496 RYNNTISILDLRANGLRDE----VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
           R N +++ LDL +N L+D+    +C        F     SL+ +     C+  L  A CL
Sbjct: 351 RSNKSLTHLDLASNQLQDDGAKLLC------DVFRHPGCSLQDLQLMG-CV--LTSACCL 401

Query: 552 AQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALK 585
             +  ++N   L S+DL  N+++DDG   + +AL+
Sbjct: 402 DLASAILNNPNLRSLDLGNNDLQDDGVKILCEALR 436



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 147/324 (45%), Gaps = 12/324 (3%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEG 262
           A G + F   L  N  L  L+L G+ IGD GVK LC+ L   +  ++ L L S  L    
Sbjct: 169 ADGCQNFANCLIHNQNLLHLDLKGSDIGDGGVKSLCEALRHPDCKLQNLSLESCSLTTLC 228

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
              I+++L  +  L  L L+ N I   G   L EAL   N  +  L L        G   
Sbjct: 229 CLNISKILIRSHSLIFLNLSTNNILDDGVELLCEALRHPNCHLERLSLESCGLTVAGCED 288

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L+  L  NK L  L L  N +GD G++ L   L   +  L  L +     ++    H++ 
Sbjct: 289 LSLALINNKGLTHLCLADNILGDGGVKLLSDVLKHPQCTLQSLVLRRCHFTSGSCEHLSS 348

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLK 440
            +++ KSL  ++L  N + D+GA+ + D  +    ++  + L G  + S     +A  + 
Sbjct: 349 SLRSNKSLTHLDLASNQLQDDGAKLLCDVFRHPGCSLQDLQLMGCVLTSACCLDLASAIL 408

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG--WCQIGASGAEFVADMLRYN 498
           +N  + SLDL  N +  DG K L E L+ H N N  +LG  +C + +   + ++  L  N
Sbjct: 409 NNPNLRSLDLGNNDLQDDGVKILCEALR-HPNCNIQRLGLEYCGLTSLCCQDLSSTLSSN 467

Query: 499 NTISILDLRANGLRDEVCSGCNGL 522
             +  ++L  N L      GC G+
Sbjct: 468 QRLIKMNLVQNTL------GCEGI 485



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 3/249 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +++S  N  D+G+  L E+L + N   E +S  + G+T AG +     L +N  L  L L
Sbjct: 245 LNLSTNNILDDGVELLCEALRHPNCHLERLSLESCGLTVAGCEDLSLALINNKGLTHLCL 304

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           + N +GD GVK L D+L      ++ L L          + ++  L++N  L  L+L +N
Sbjct: 305 ADNILGDGGVKLLSDVLKHPQCTLQSLVLRRCHFTSGSCEHLSSSLRSNKSLTHLDLASN 364

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +   G   L +       +++ L L G    +     LA  +  N +LR L L  N + 
Sbjct: 365 QLQDDGAKLLCDVFRHPGCSLQDLQLMGCVLTSACCLDLASAILNNPNLRSLDLGNNDLQ 424

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+G++ L   L      +  L +    +++     ++  + + + L+ +NL  N +G EG
Sbjct: 425 DDGVKILCEALRHPNCNIQRLGLEYCGLTSLCCQDLSSTLSSNQRLIKMNLVQNTLGCEG 484

Query: 404 AEKIADALK 412
            +K+ + L+
Sbjct: 485 IKKLCEVLR 493


>gi|426366743|ref|XP_004050406.1| PREDICTED: ribonuclease inhibitor-like [Gorilla gorilla gorilla]
          Length = 350

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 8/326 (2%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLR 259
           G+T A  K     L+ N AL  LNL  N +GD GV C+   L   +  +++L L +  L 
Sbjct: 13  GLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLT 72

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
             G   ++  L++   L+ L L++N++  +G   L E LL+    +  L L      A  
Sbjct: 73  GAGCGVLSSTLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAAS 132

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              LA  L      +EL +  N I + G+R L  GL     +L  L + +  +++     
Sbjct: 133 CEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD 192

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           +   + +  SL  + L  N +GD G AE     L  +  + T+ +    I +KG   + R
Sbjct: 193 LCGIVASKASLRELALGSNRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 252

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
           VL+    +  L LA N +G +GA+ L E L   G  + +L +  C   A+     + +L 
Sbjct: 253 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLA 312

Query: 497 YNNTISILDLRANGLRD----EVCSG 518
            N  +  L +  N L D    E+C G
Sbjct: 313 QNKFLLELQISNNRLEDAGVRELCQG 338



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 152/322 (47%), Gaps = 6/322 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L+S   L+
Sbjct: 31  ALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRSLPTLQ 90

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     + +A +L+     + L 
Sbjct: 91  ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELT 150

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 151 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 210

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 211 NRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 270

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 271 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDA 330

Query: 459 GAKALSEVLKFHGNINTLKLGW 480
           G + L + L   G++  L++ W
Sbjct: 331 GVRELCQGLGQPGSV--LRVLW 350



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 14/269 (5%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  N +L EL+L  N +GD G+  ++ GL S   K+  L + N  ++  G   ++ 
Sbjct: 22  ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSS 81

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLK 440
            +++  +L  ++L  N +GD G + + + L   +  +  + L   N+ +     +A VL+
Sbjct: 82  TLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLR 141

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
                  L ++ N I   G + L + LK     +  LKL  C + +     +  ++    
Sbjct: 142 AKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKA 201

Query: 500 TISILDLRANGLRD----EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
           ++  L L +N L D    E+C G       H +  S    L+   C    +G   L +  
Sbjct: 202 SLRELALGSNRLGDVGIAELCPG-----LLHPS--SRLRTLWIWECGITAKGCGDLCRVL 254

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           +   E+L  + LA NE+ D+GA  + + L
Sbjct: 255 RA-KESLKELSLAGNELGDEGARLLCETL 282


>gi|109462625|ref|XP_001072321.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14-like
           [Rattus norvegicus]
          Length = 994

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 4/308 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTL 223
           + +D+   + GD G+  L E+L Y      V    +  +     +     LQSN +L  L
Sbjct: 634 THLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRSLVFL 693

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NLS N + ++GVK LC++L + N  +ERL L+S  L   G + ++  L     L  L L 
Sbjct: 694 NLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTHLCLA 753

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N+++  G   L+  L     T++SL L   Y   +G+  L+  L+ NKSL  L L  N 
Sbjct: 754 HNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNK 813

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G++ L   L      L  L++    ++++    +A  + N  +L  ++L  N + D
Sbjct: 814 LADSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDD 873

Query: 402 EGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G   + +AL+  N  I  + L    +       +  +L +N  +  ++L  N +  +  
Sbjct: 874 AGLNILCEALRNPNCQIRRLGLENCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAI 933

Query: 461 KALSEVLK 468
           + L +VL+
Sbjct: 934 RNLCKVLR 941



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 140/303 (46%), Gaps = 6/303 (1%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           N  +  L+L    +GD GVK LC+ L      +  L+L S DL     + +++ L++N  
Sbjct: 630 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRS 689

Query: 276 LRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L  L L+ N +   G  SL E L   N  +  L L       +G   L+  L   K L  
Sbjct: 690 LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTH 749

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N + DEGI  L   L   +  L  L +     +  G+ H++  ++N KSL+ ++L
Sbjct: 750 LCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDL 809

Query: 395 YMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N + D G + +   L+Q N  +  ++L G  + S+    +A VL +NS + +LDL  N
Sbjct: 810 GFNKLADSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNN 869

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +   G   L E L+ + N    +LG   C +     + + D+L  N ++  ++L  N L
Sbjct: 870 ILDDAGLNILCEALR-NPNCQIRRLGLENCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSL 928

Query: 512 RDE 514
             E
Sbjct: 929 DYE 931



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 94/193 (48%), Gaps = 5/193 (2%)

Query: 176 DEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           DEG+  L+ +L + + T + +       T  G +     LQ+N +L  L+L  N + D G
Sbjct: 759 DEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLADSG 818

Query: 235 VKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           VK LC  L   N  ++ L+L    L  E    +A +L NNS L  L+L NN++D +G   
Sbjct: 819 VKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDDAGLNI 878

Query: 294 LAEALL-ENSTIRSLHLNGNYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           L EAL   N  IR L L  N G   G    L   L  N+S+ +++L  NS+  E IR L 
Sbjct: 879 LCEALRNPNCQIRRLGLE-NCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAIRNLC 937

Query: 352 SGLSSRKGKLAVL 364
             L S   K+  L
Sbjct: 938 KVLRSPTCKMEFL 950



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 15/281 (5%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++  L L    +GD G++ L   L  +  KL VL + +  ++     ++++ +++ +S
Sbjct: 630 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRS 689

Query: 389 LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L+++NL  N + ++G + + + L+  N  +  + L    +   G   ++  L     +T 
Sbjct: 690 LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTH 749

Query: 448 LDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           L LA+N +  +G + LS  L+     + +L L  C     G+E ++  L+ N ++  LDL
Sbjct: 750 LCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDL 809

Query: 507 RANGLRDEVCSG----CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
             N L D   SG    C  L   +  +  L+ M     C+   +    LA S  V N  L
Sbjct: 810 GFNKLAD---SGVKLLCQTLQQPNCNLQELELM----GCVLTSEACGDLA-SVLVNNSNL 861

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
            ++DL  N + D G   + +AL+ N +  +  L L N  LT
Sbjct: 862 WNLDLGNNILDDAGLNILCEALR-NPNCQIRRLGLENCGLT 901



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           VL  N  +  +DL  + +     K L+E    H   N  K+ +  +    + +    L +
Sbjct: 571 VLHTNESLLEMDLYESRLDESLMKILNEEFS-HPKCNLQKVMFRAVCFLNSCYDFSFLAF 629

Query: 498 NNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
           NNT++ LDL+   L D  V + C  L +    +  L+ +    L + + Q      QS  
Sbjct: 630 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLR-LESCDLNVTHCQNLSKALQS-- 686

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG----QSALTD 612
             N +L  ++L+ N + +DG  ++ + L+ N +  +  L LA+  LTK G     SALT 
Sbjct: 687 --NRSLVFLNLSTNSLSNDGVKSLCEVLE-NPNCPLERLALASCGLTKVGCEVLSSALTK 743

Query: 613 AKDLVY 618
            K L +
Sbjct: 744 TKRLTH 749


>gi|399498016|emb|CCG20336.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399497828|emb|CCG20242.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHXHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N   DEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHXHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 132/341 (38%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N    +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A S K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGH--XHLIEVDMSSNALRRAGARVL 459



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
            DEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 ADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           +A  +     +  L L  N     GA  +AK LEG+  L E                   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHXHLIEVDMSSNALRRAGARVLAQT 462

Query: 335 ---------LHLHGNSIGDEGIRAL 350
                    L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|32966211|gb|AAP92142.1| leucine-rich repeat protein N3C [synthetic construct]
          Length = 244

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 5/179 (2%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           E++    N +T AG+K    VL+SN +L+ L+LS N +GD GV+ L   L+D    +E L
Sbjct: 42  EQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLESL 101

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
           +L S DL + G K +A +L++N  LR L L+ N +  +G   L + LL+  T +  L LN
Sbjct: 102 KLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKLDLN 161

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL---SSRKGKLAVLDI 366
                  G   LA  L  N SLREL L  N +GD G+R L+ GL    +R  +L + DI
Sbjct: 162 DTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEQLVLYDI 220



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 1/160 (0%)

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-I 304
           A +E+L+L+  DL + G K +A +L++N  LR L L+NN +  +G   L + LL+  T +
Sbjct: 39  ARLEQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRL 98

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            SL L        G   LA  L  N SLREL+L  N +GD G+R L+ GL     +L  L
Sbjct: 99  ESLKLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKL 158

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           D+ +  ++  G   +A  +++  SL  ++L  N +GD G 
Sbjct: 159 DLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGV 198



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 27/188 (14%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +  L LN N     G   LA  L  N SLREL L  N +GD G+R L+ GL     +L  
Sbjct: 41  LEQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLES 100

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L + +  ++  G   +A  +++  SL  +NL  N +GD G   +   L            
Sbjct: 101 LKLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGL------------ 148

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
                          L   + +  LDL    +   G K L+ VL+ + ++  L L   ++
Sbjct: 149 ---------------LDPGTRLEKLDLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKL 193

Query: 484 GASGAEFV 491
           G +G   +
Sbjct: 194 GDAGVRLL 201


>gi|291414497|ref|XP_002723498.1| PREDICTED: nucleotide-binding oligomerization domain containing
           2-like [Oryctolagus cuniculus]
          Length = 392

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 30/268 (11%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L  +GA+A+A  L +   ++ L+L +N +  +G  +LA AL + S+I  + L+
Sbjct: 86  LNLRHRGLGPQGARALAPTLASIPYVKRLDLRDNGLRGAGAKALAGALSKTSSICDVDLS 145

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  GA GA AL  GL GN+S+++L L GN + ++  R                      
Sbjct: 146 ENQLGAAGAQALCAGLSGNQSVQKLWLAGNGLEEQAAR---------------------- 183

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                  ++AE +     L +++L  N + ++  E +A AL +N  +T ++L  N++   
Sbjct: 184 -------YLAELLLAHTGLKFLDLSYNQLNEQAGETLAPALAENTGLTELNLSWNHLRGP 236

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A AR L+ N  +  LD+++N  G  GA A+ E LK +  +  L +   +I A+GA+ 
Sbjct: 237 GAVAFARALEANIFLKVLDVSHNGFGDPGASAVGEALKTNNVLEELNMSNNRISAAGAQS 296

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSG 518
           +   LR N T+ IL  R N +R E C G
Sbjct: 297 LGLGLRVNQTLRILVTR-NPVRTEGCFG 323



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 2/248 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++  R  G +G   LA +L      + +    NG+  AG KA  G L    ++  ++LS
Sbjct: 86  LNLRHRGLGPQGARALAPTLASIPYVKRLDLRDNGLRGAGAKALAGALSKTSSICDVDLS 145

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G  G + LC  L  N  V++L L+   L ++ A+ +AELL  ++ L+ L+L+ N +
Sbjct: 146 ENQLGAAGAQALCAGLSGNQSVQKLWLAGNGLEEQAARYLAELLLAHTGLKFLDLSYNQL 205

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
           +     +LA AL EN+ +  L+L+ N+    GA A A+ LE N  L+ L +  N  GD G
Sbjct: 206 NEQAGETLAPALAENTGLTELNLSWNHLRGPGAVAFARALEANIFLKVLDVSHNGFGDPG 265

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A+   L +    L  L++ NN ISA GA  +   ++     L I +  N +  EG   
Sbjct: 266 ASAVGEALKTNN-VLEELNMSNNRISAAGAQSLGLGLR-VNQTLRILVTRNPVRTEGCFG 323

Query: 407 IADALKQN 414
           +  A++ N
Sbjct: 324 LLKAVRDN 331



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 35/254 (13%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+G    L++ +  +  +GA  +A  + +   +  ++L  N +   GA+ +A AL +  +
Sbjct: 79  RQGNTPELNLRHRGLGPQGARALAPTLASIPYVKRLDLRDNGLRGAGAKALAGALSKTSS 138

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I  +DL  N + + GA A+   L  N  +  L LA N +    A+ L+E+L  H  +  L
Sbjct: 139 ICDVDLSENQLGAAGAQALCAGLSGNQSVQKLWLAGNGLEEQAARYLAELLLAHTGLKFL 198

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L + Q+     E +A  L  N  ++ L+L  N LR                        
Sbjct: 199 DLSYNQLNEQAGETLAPALAENTGLTELNLSWNHLRG----------------------- 235

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                     GA   A++ +  N  L  +D++ N   D GA A+ +ALK N    +  LN
Sbjct: 236 ---------PGAVAFARALE-ANIFLKVLDVSHNGFGDPGASAVGEALKTNN--VLEELN 283

Query: 597 LANNFLTKFGQSAL 610
           ++NN ++  G  +L
Sbjct: 284 MSNNRISAAGAQSL 297



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 95/236 (40%), Gaps = 45/236 (19%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LY+      G    +  L+Q  T   ++L    +  +GA A+A  L     +  LDL  N
Sbjct: 61  LYLRSCRAHGVVPASCFLRQGNT-PELNLRHRGLGPQGARALAPTLASIPYVKRLDLRDN 119

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +   GAKAL+  L    +I  + L   Q+GA+GA+ +   L  N ++  L L  NGL +
Sbjct: 120 GLRGAGAKALAGALSKTSSICDVDLSENQLGAAGAQALCAGLSGNQSVQKLWLAGNGLEE 179

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                                           Q A+ LA+   + +  L  +DL++N++ 
Sbjct: 180 --------------------------------QAARYLAE-LLLAHTGLKFLDLSYNQLN 206

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 629
           +     +A AL   E+  +T LNL+ N L   G  A   A          E NIF 
Sbjct: 207 EQAGETLAPALA--ENTGLTELNLSWNHLRGPGAVAFARA---------LEANIFL 251


>gi|426250363|ref|XP_004018906.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Ovis
           aries]
          Length = 502

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 258 EWNLFLFTYRDCHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSH 317

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 318 NLIGDRGARAAAKLLS--HSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCI 375

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL  N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 376 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTTLTSINLSCNHIGLDG 435

Query: 460 AKALSE 465
            K L E
Sbjct: 436 GKQLLE 441



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 2/197 (1%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK   L+ + + D+  + L   L+D+  +E L LS   + D GA+A A+LL ++S LRV
Sbjct: 281 TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLL-SHSRLRV 339

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L NN +   G  SLA AL  NS + SL+L  N     G  ALA  L  NK L  LHL 
Sbjct: 340 LNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLG 399

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN +  E    L+S + +    L  +++  N I   G   + E + + K+LL  +L ++D
Sbjct: 400 GNELS-EPTATLLSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 458

Query: 399 IGDEGAEKIADALKQNR 415
           I  E    I  AL  NR
Sbjct: 459 IAQESEYLIGQALCANR 475



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           RL  S VD  D+ A+ +   L ++  L  L+L++N+I   G  + A+ LL +S +R L+L
Sbjct: 286 RLTRSKVD--DDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAK-LLSHSRLRVLNL 342

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA++LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 343 ANNQVRAPGAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKC-LTTLHLGGN 401

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  ++I  
Sbjct: 402 ELSEPTATLLSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDIAQ 461

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 462 ESEYLIGQALCAN 474



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 257 FEWNLFLFTYRDCHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 316

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ LNL+ N +   G   L   L  N+ +  L L    +
Sbjct: 317 HNLIGDRGARAAAKLL-SHSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCI 375

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L  N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 376 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTTLTSINLSCNHIGLDG 435

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + I  E
Sbjct: 436 GKQLLEGMSDNKTLLEFDLRLSDIAQE 462



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 250 VKDCGMNFEWNLFLFTYRD--CHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDH 307

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L  H  +  L L   Q+ A GA  +A  L +N+ + 
Sbjct: 308 PALEELDLSHNLIGDRGARAAAKLLS-HSRLRVLNLANNQVRAPGAHSLAHALGHNSNLI 366

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+++ K +    L  N L +    L      +N  
Sbjct: 367 SLNLRLNCIEDE-----GGQALAH-ALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTT 420

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 421 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 458



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G   LA +LG+N     ++   N I   G +A    L +N  L TL+L GN + +     
Sbjct: 351 GAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLGGNELSEPTATL 410

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L  +L  N  +  + LS   +  +G K + E + +N  L   +L  + I       + +A
Sbjct: 411 LSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDIAQESEYLIGQA 470

Query: 298 LLEN-STIRSLHLNGNYGGALGANALAKGLE 327
           L  N    R   LN ++   L +   AKG E
Sbjct: 471 LCANREAARQRALNPSH---LMSPVTAKGPE 498


>gi|399497880|emb|CCG20268.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|410923541|ref|XP_003975240.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Takifugu rubripes]
          Length = 652

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 138/295 (46%), Gaps = 33/295 (11%)

Query: 161 LRAFSSVDM--SGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR   S +M    R+ G +G   LA +L  N +  +++   N +   G  A   +L+ N 
Sbjct: 106 LRQIQSSEMLLMHRSLGPQGTKALAVALVTNTSVLKLNLRDNWMEGMGGAAIAEMLKENC 165

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +  ++LS N +GD G   + D+L  N+ +  + LS  D  DE A+ +++ L  N+ L+ 
Sbjct: 166 YITEVDLSDNNLGDRGAGAVADMLQRNSTLVEISLSGNDFTDEAAERLSQALTVNTRLQH 225

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L++N +       L   L EN+ +RS+ L  N     GA  LA GL GN  LR + L 
Sbjct: 226 LDLSHNALAERAGQILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIFLRSVDLS 285

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N  G EG  AL   L   +  L  L++ NN I  +GA H+A                  
Sbjct: 286 FNGFGKEGAVALGQALRENE-VLEELNVSNNRIPPEGAIHLA------------------ 326

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLA 451
           +G          LK N+TI  + +G N I + G   I + +++N  S I +LD +
Sbjct: 327 LG----------LKHNKTIRILQIGKNPIQNAGCYGILQSMQENPDSAIEALDFS 371



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 10/268 (3%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+ L   S+G +G +AL   L +    L  L++ +N +   G   +AE +K    +  ++
Sbjct: 113 EMLLMHRSLGPQGTKALAVALVTNTSVLK-LNLRDNWMEGMGGAAIAEMLKENCYITEVD 171

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N++GD GA  +AD L++N T+  I L GN+   + A  +++ L  N+ +  LDL++N
Sbjct: 172 LSDNNLGDRGAGAVADMLQRNSTLVEISLSGNDFTDEAAERLSQALTVNTRLQHLDLSHN 231

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +     + L   L  +  + ++ L W  I   GA  +A+ L  N  +  +DL  NG   
Sbjct: 232 ALAERAGQILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIFLRSVDLSFNGF-- 289

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
               G  G      A+   + +   ++  N +  +GA  LA   K  N+ +  + +  N 
Sbjct: 290 ----GKEGAVALGQALRENEVLEELNVSNNRIPPEGAIHLALGLK-HNKTIRILQIGKNP 344

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLAN 599
           I++ G + I Q+++ N D A+ +L+ ++
Sbjct: 345 IQNAGCYGILQSMQENPDSAIEALDFSD 372



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 1/218 (0%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  KE    + VD+S  N GD G   +A+ L  N T  E+S + N  T    +     L 
Sbjct: 159 EMLKENCYITEVDLSDNNLGDRGAGAVADMLQRNSTLVEISLSGNDFTDEAAERLSQALT 218

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  L+ L+LS N + +   + L   L +N G+  + L+   +R  GA  +A  L  N  
Sbjct: 219 VNTRLQHLDLSHNALAERAGQILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIF 278

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           LR ++L+ N     G  +L +AL EN  +  L+++ N     GA  LA GL+ NK++R L
Sbjct: 279 LRSVDLSFNGFGKEGAVALGQALRENEVLEELNVSNNRIPPEGAIHLALGLKHNKTIRIL 338

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGNNSIS 372
            +  N I + G   ++  +       +  LD  + ++S
Sbjct: 339 QIGKNPIQNAGCYGILQSMQENPDSAIEALDFSDITVS 376



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 35/262 (13%)

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           E  R + S    R+ + + + + + S+  +G   +A  +    S+L +NL  N +   G 
Sbjct: 95  EKFRVVPSSAFLRQIQSSEMLLMHRSLGPQGTKALAVALVTNTSVLKLNLRDNWMEGMGG 154

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             IA+ LK+N  IT +DL  NN+  +GA A+A +L+ NS +  + L+ N    + A+ LS
Sbjct: 155 AAIAEMLKENCYITEVDLSDNNLGDRGAGAVADMLQRNSTLVEISLSGNDFTDEAAERLS 214

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           + L  +  +  L L    +     + +   L  N  +  + L  N +R            
Sbjct: 215 QALTVNTRLQHLDLSHNALAERAGQILGATLSENTGLRSVSLAWNCIRG----------- 263

Query: 525 FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                                +GA  LA      N  L S+DL+FN    +GA A+ QAL
Sbjct: 264 ---------------------RGAVMLANGLG-GNIFLRSVDLSFNGFGKEGAVALGQAL 301

Query: 585 KANEDVAVTSLNLANNFLTKFG 606
           + NE   +  LN++NN +   G
Sbjct: 302 RENE--VLEELNVSNNRIPPEG 321



 Score = 38.9 bits (89), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 13/193 (6%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L     E     SV ++       G   LA  LG N     V  + NG    G  A  
Sbjct: 239 QILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIFLRSVDLSFNGFGKEGAVALG 298

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L+ LN+S N I  EG   L   L  N  +  LQ+    +++ G   I + ++
Sbjct: 299 QALRENEVLEELNVSNNRIPPEGAIHLALGLKHNKTIRILQIGKNPIQNAGCYGILQSMQ 358

Query: 272 NN--SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
            N  S +  L+ ++  +    F  L  A  E     ++    N+GG +GA         +
Sbjct: 359 ENPDSAIEALDFSDITVS-QDFEDLYAATKEVFPALAV----NHGGKIGA------FTKH 407

Query: 330 KSLRELHLHGNSI 342
           K+ + L L G+ +
Sbjct: 408 KTEKRLSLSGDKV 420


>gi|290973802|ref|XP_002669636.1| predicted protein [Naegleria gruberi]
 gi|284083186|gb|EFC36892.1| predicted protein [Naegleria gruberi]
          Length = 548

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 201/459 (43%), Gaps = 103/459 (22%)

Query: 177 EGLFFLAESLGYNQTA----EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           +G+  + E  G   T      ++    N I    +K     L S   LK LNL  N IG+
Sbjct: 98  DGVELIEEQCGTISTKLVNLTQLDLCRNKIKPTVVKG----LSSLTNLKKLNLGHNEIGN 153

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGF 291
           +G K +  +           L+++DL D G     A+ L + + L  L L NN I  +G 
Sbjct: 154 DGAKHVSSLT---------HLTALDLFDNGIGPNGAQRLSSLTNLTQLNLGNNEIGDAGA 204

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             ++   L N T  +L +       LGAN + K L G K L EL L GN IG EG+  L 
Sbjct: 205 EHISS--LTNLTQLNLRIT-----KLGANGV-KSLRGLKKLTELDLSGNQIGYEGVNNL- 255

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHV------------AEYIKNCKSLLWINLYMNDI 399
               S    L  L++GNN I+  GA  +            AE++   K+L  INL +N I
Sbjct: 256 ----SELKNLKKLNLGNNRITGDGAERLCGLENLTELDLRAEHLSQLKNLTQINLCLNQI 311

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G  GAE++ +       +T ++L  N I +  A ++ ++      +T LDL YN I  DG
Sbjct: 312 GPNGAERLCEL----TNLTQLNLRSNLIGAIKAESLCKL----ENLTQLDLGYNRIEDDG 363

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC 519
           A+ LS++ K    +  L L   QIG+ GA+ ++++      ++ LDL  NG+ D      
Sbjct: 364 AQRLSKLKK----LTQLDLSGNQIGSIGAQSLSEL----TNLTHLDLNGNGIED------ 409

Query: 520 NGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 579
                                      GA+ L++  K     LT + L  N I DDGA  
Sbjct: 410 ---------------------------GAQHLSKLKK-----LTRLGLNDNRIGDDGAKY 437

Query: 580 IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 618
           +++  K      +T L+L NN +   G   L+  K++ Y
Sbjct: 438 LSELNK------LTHLSLDNNGIGDTGAECLSKLKNITY 470



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 144/336 (42%), Gaps = 78/336 (23%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           L+  + +D+SG   G EG+  L+E                             L++   L
Sbjct: 234 LKKLTELDLSGNQIGYEGVNNLSE-----------------------------LKN---L 261

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K LNL  N I  +G + LC       G+E   L+ +DLR E    +  L + N  L    
Sbjct: 262 KKLNLGNNRITGDGAERLC-------GLE--NLTELDLRAEHLSQLKNLTQINLCL---- 308

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
              N I  +G    AE L E + +  L+L  N  GA+ A +L K LE   +L +L L  N
Sbjct: 309 ---NQIGPNG----AERLCELTNLTQLNLRSNLIGAIKAESLCK-LE---NLTQLDLGYN 357

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I D+G + L     S+  KL  LD+  N I + GA  ++E           NL   D+ 
Sbjct: 358 RIEDDGAQRL-----SKLKKLTQLDLSGNQIGSIGAQSLSE---------LTNLTHLDLN 403

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             G E  A  L + + +T + L  N I   GA  ++ + K    +T L L  N IG  GA
Sbjct: 404 GNGIEDGAQHLSKLKKLTRLGLNDNRIGDDGAKYLSELNK----LTHLSLDNNGIGDTGA 459

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + LS++     NI  L L   +I  +G + +  ++R
Sbjct: 460 ECLSKL----KNITYLSLDDNEIETAGKKHLRKLIR 491


>gi|326676360|ref|XP_001922112.3| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Danio
            rerio]
          Length = 1251

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 180  FFLAESLGYNQTAEEV--------------SFAANGITAAGIKAFDGVLQSNIA-LKTLN 224
            F L + +G   TA+EV                +   +T  G  A   VL+S+ + L+ L+
Sbjct: 930  FDLNQFIGTQNTADEVLQKLQPVVKESRSVQLSGCSVTDKGCAALALVLRSDSSHLRELD 989

Query: 225  LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELN 282
            LS N + D GVK L D L D +  +E+L+LS   + DEG  A+A  L++NS  L  L+L+
Sbjct: 990  LSENNLRDSGVKLLSDGLKDPHCKLEKLRLSDCGVTDEGCAALASALRSNSTHLTELDLS 1049

Query: 283  NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGN 340
             N ++ SG   L++ L + +  +  L L+       G   LA  L  N + LREL L  N
Sbjct: 1050 LNNLEDSGVKLLSDGLKDPHCKLEILRLSDCGVTVEGCADLASALRSNSTHLRELDLTLN 1109

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDI 399
            ++ D G+  L +GL     KL  L + +   + +G   +A  ++ N   L  ++L +N+ 
Sbjct: 1110 NLEDSGVNLLSAGLKDPHCKLEKLRLSDCGFTDEGCADLASALRSNSTHLTELDLSLNNF 1169

Query: 400  GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGA 457
            GD G + ++D LK     +  + L    + ++G  A+A  L+ N   +  LDL+ N +G 
Sbjct: 1170 GDSGVKLLSDGLKDPHCKLEKLRLSYCRVRAEGGVALASALRSNPEHLRELDLSENKLGN 1229

Query: 458  DGAKALSEV 466
             G K LSE+
Sbjct: 1230 SGVKMLSEL 1238



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 39/317 (12%)

Query: 305  RSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
            RS+ L+G      G  ALA  L  + S LREL L  N++ D G++ L  GL     KL  
Sbjct: 957  RSVQLSGCSVTDKGCAALALVLRSDSSHLRELDLSENNLRDSGVKLLSDGLKDPHCKLEK 1016

Query: 364  LDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTID 421
            L + +  ++ +G   +A  ++ N   L  ++L +N++ D G + ++D LK     +  + 
Sbjct: 1017 LRLSDCGVTDEGCAALASALRSNSTHLTELDLSLNNLEDSGVKLLSDGLKDPHCKLEILR 1076

Query: 422  LGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLG 479
            L    +  +G + +A  L+ NS  +  LDL  N +   G   LS  LK  H  +  L+L 
Sbjct: 1077 LSDCGVTVEGCADLASALRSNSTHLRELDLTLNNLEDSGVNLLSAGLKDPHCKLEKLRLS 1136

Query: 480  WCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
             C     G   +A  LR N+T ++ LDL  N   D                         
Sbjct: 1137 DCGFTDEGCADLASALRSNSTHLTELDLSLNNFGD------------------------- 1171

Query: 539  SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                    G K L+   K  +  L  + L++  +R +G  A+A AL++N +  +  L+L+
Sbjct: 1172 -------SGVKLLSDGLKDPHCKLEKLRLSYCRVRAEGGVALASALRSNPE-HLRELDLS 1223

Query: 599  NNFLTKFGQSALTDAKD 615
             N L   G   L++ K+
Sbjct: 1224 ENKLGNSGVKMLSELKN 1240



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 6/207 (2%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSN-IALK 221
             + +D+S  N  D G+  L++ L       E+   +  G+T  G       L+SN   L+
Sbjct: 1043 LTELDLSLNNLEDSGVKLLSDGLKDPHCKLEILRLSDCGVTVEGCADLASALRSNSTHLR 1102

Query: 222  TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVL 279
             L+L+ N + D GV  L   L D +  +E+L+LS     DEG   +A  L++NS  L  L
Sbjct: 1103 ELDLTLNNLEDSGVNLLSAGLKDPHCKLEKLRLSDCGFTDEGCADLASALRSNSTHLTEL 1162

Query: 280  ELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHL 337
            +L+ N    SG   L++ L + +  +  L L+     A G  ALA  L  N + LREL L
Sbjct: 1163 DLSLNNFGDSGVKLLSDGLKDPHCKLEKLRLSYCRVRAEGGVALASALRSNPEHLRELDL 1222

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVL 364
              N +G+ G++ L    +  + KL  L
Sbjct: 1223 SENKLGNSGVKMLSELKNDSRYKLDTL 1249


>gi|281338814|gb|EFB14398.1| hypothetical protein PANDA_011621 [Ailuropoda melanoleuca]
          Length = 402

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 9/320 (2%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRD 260
           ++ A   A   VL ++  L  L  S   +    +K LC+ L D N  +++L+L +  L +
Sbjct: 25  LSPAPCGALAAVLSTSQWLTDLEFSETKLEASALKLLCEDLKDPNCKLQKLKLCASLLPE 84

Query: 261 EG---AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGA 316
                 K +A +L  N  L  L+L+ N +  +G   L E L   N  +  L L+  Y   
Sbjct: 85  SPEVVCKYLAAVLICNPNLTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCYLTD 144

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                L+  L+ +++L+EL +  +++GD G++ L  GL   KG L  L +   S+SA   
Sbjct: 145 ASCMELSSFLQVSQTLKELFVFASALGDTGVQHLCEGLRHAKGILENLVLSECSLSAACC 204

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-- 434
             +A+ + + +SL  + L  N I D G + + + LKQ       DL   N H  G     
Sbjct: 205 ESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQ-PDCQLKDLALWNCHLTGECCQD 263

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVAD 493
           +   L  N  +  LDL+ N +G  G + L E LK     ++TL L  C +  +    +A 
Sbjct: 264 LCNALYTNEYLRDLDLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAECHLTDACCGALAS 323

Query: 494 MLRYNNTISILDLRANGLRD 513
           +L  N  +++LDL  N L+D
Sbjct: 324 VLNRNENLTLLDLSGNDLKD 343



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 14/276 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +D+S    GD G+ +L E L + N   E++  +   +T A        LQ +  LK 
Sbjct: 103 LTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCYLTDASCMELSSFLQVSQTLKE 162

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L +  + +GD GV+ LC+ L    G+ E L LS   L     +++A++L +   L  L L
Sbjct: 163 LFVFASALGDTGVQHLCEGLRHAKGILENLVLSECSLSAACCESLAQVLSSTRSLTRLLL 222

Query: 282 NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            NN I+  G   L E L      L++  + + HL G          L   L  N+ LR+L
Sbjct: 223 INNKIEDLGLKLLCEGLKQPDCQLKDLALWNCHLTGE-----CCQDLCNALYTNEYLRDL 277

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N++G+ G++ L  GL     KL  L +    ++      +A  +   ++L  ++L 
Sbjct: 278 DLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAECHLTDACCGALASVLNRNENLTLLDLS 337

Query: 396 MNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSK 430
            ND+ D G + + D+L Q    + T  +  +++H +
Sbjct: 338 GNDLKDFGVQMLCDSLIQPICKLQTFYIDTDHLHEE 373



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 127/322 (39%), Gaps = 24/322 (7%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N  +++L L           ALA  L  ++ L +L      +    ++ L   L     K
Sbjct: 12  NCILQTLRLYRCLLSPAPCGALAAVLSTSQWLTDLEFSETKLEASALKLLCEDLKDPNCK 71

Query: 361 LAVLDIG----NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NR 415
           L  L +       S      +  A  I N  +L  ++L  N +GD G + + + L+  N 
Sbjct: 72  LQKLKLCASLLPESPEVVCKYLAAVLICN-PNLTELDLSENPLGDTGVKYLCEGLRHSNC 130

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNIN 474
            +  +DL    +       ++  L+ +  +  L +  + +G  G + L E L+   G + 
Sbjct: 131 KVEKLDLSTCYLTDASCMELSSFLQVSQTLKELFVFASALGDTGVQHLCEGLRHAKGILE 190

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE----VCSGCNGLSFFHSAIY 530
            L L  C + A+  E +A +L    +++ L L  N + D     +C G            
Sbjct: 191 NLVLSECSLSAACCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEG------LKQPDC 244

Query: 531 SLKHMLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
            LK +  ++    +L G  C  L  +    NE L  +DL+ N + + G   + + LK + 
Sbjct: 245 QLKDLALWNC---HLTGECCQDLCNAL-YTNEYLRDLDLSDNALGNGGMQVLCEGLK-HP 299

Query: 589 DVAVTSLNLANNFLTKFGQSAL 610
              + +L LA   LT     AL
Sbjct: 300 SCKLHTLWLAECHLTDACCGAL 321


>gi|320164479|gb|EFW41378.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 348

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 84/144 (58%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + +  I   GA  +A+ +K    L W++L  N IGD G + IA +LK N T+T + L  N
Sbjct: 4   LSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNN 63

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   G  AIA+ LK N  +T L LA N IG  GA+A++EVLK +  +  L L   QIG 
Sbjct: 64  QIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGD 123

Query: 486 SGAEFVADMLRYNNTISILDLRAN 509
            GA+ VA+ L+ N+ ++ L LR+N
Sbjct: 124 VGAQGVAEALKVNSKLNQLSLRSN 147



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/137 (41%), Positives = 79/137 (57%), Gaps = 1/137 (0%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G +A+   L +   +L  LD+ NN I   G   +A+ +K  ++L  ++L  N IGD
Sbjct: 9   IGDAGAQAIAKALKANT-RLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNNQIGD 67

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G + IA +LK N T+T + L GN I   GA AIA VLK NS +T L L  N IG  GA+
Sbjct: 68  SGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGDVGAQ 127

Query: 462 ALSEVLKFHGNINTLKL 478
            ++E LK +  +N L L
Sbjct: 128 GVAEALKVNSKLNQLSL 144



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S +   I  AG +A    L++N  L  L+LS N IGD GV+ +   L  N  +  L LS+
Sbjct: 3   SLSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSN 62

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D G +AIA+ LK N  L  L L  N I  +G  ++AE L  NST+  L L+ N  G
Sbjct: 63  NQIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIG 122

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            +GA  +A+ L+ N  L +L L  N IG+ G +AL
Sbjct: 123 DVGAQGVAEALKVNSKLNQLSLRSNCIGNLGFQAL 157



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS   IGD G + +   L  N  +  L LS+  + D G +AIA+ LK N  L  L L+N
Sbjct: 3   SLSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSN 62

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  SG  ++A++L  N T+  LHL GN  G  GA A+A+ L+ N +L EL LH N IG
Sbjct: 63  NQIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIG 122

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           D G + +   L     KL  L + +N I   G F   +        + I+ Y + +
Sbjct: 123 DVGAQGVAEALKV-NSKLNQLSLRSNCIGNLG-FQALDETSKVTCRIEIDRYYDQV 176



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 7/192 (3%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD GA+ IA ALK N  +T +DL  N I   G  AIA+ LK N  +T L L+ N IG  
Sbjct: 9   IGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNNQIGDS 68

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           G +A+++ LK +  +  L L   +IG +GA+ +A++L+ N+T++ L L  N + D    G
Sbjct: 69  GVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGD---VG 125

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
             G++        L  +   S CI  L G + L ++ KV       ID  ++++ +  AF
Sbjct: 126 AQGVAEALKVNSKLNQLSLRSNCIGNL-GFQALDETSKVT--CRIEIDRYYDQV-NPLAF 181

Query: 579 AIAQALKANEDV 590
           ++   L   +D+
Sbjct: 182 SLLPRLATAKDI 193



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 80/154 (51%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD G   +A++L  N     +  + N I  +G++A    L++N  L  L+LS N
Sbjct: 4   LSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNN 63

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD GV+ +   L  N  +  L L+   + D GA+AIAE+LK NS L  L L+ N I  
Sbjct: 64  QIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGD 123

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            G   +AEAL  NS +  L L  N  G LG  AL
Sbjct: 124 VGAQGVAEALKVNSKLNQLSLRSNCIGNLGFQAL 157



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+A    + +D+S    GD G+  +A+SL  N+T   +  + N I  +G++A    
Sbjct: 17  IAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNNQIGDSGVQAIAKS 76

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L  L+L+GN IGD G + + ++L  N+ +  L L    + D GA+ +AE LK N
Sbjct: 77  LKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGDVGAQGVAEALKVN 136

Query: 274 SILRVLELNNNMIDYSGFTSLAE 296
           S L  L L +N I   GF +L E
Sbjct: 137 SKLNQLSLRSNCIGNLGFQALDE 159



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 35/191 (18%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L    I   GA AIA+ LK N+ +T LDL+ N IG  G +A+++ LK +  +  L L   
Sbjct: 4   LSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNN 63

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           QIG SG + +A  L+ N T++ L L  N + D                            
Sbjct: 64  QIGDSGVQAIAKSLKANETLTGLHLAGNRIGDA--------------------------- 96

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                GA+ +A+  K VN  LT + L  N+I D GA  +A+ALK N    +  L+L +N 
Sbjct: 97  -----GAQAIAEVLK-VNSTLTELSLHENQIGDVGAQGVAEALKVNS--KLNQLSLRSNC 148

Query: 602 LTKFGQSALTD 612
           +   G  AL +
Sbjct: 149 IGNLGFQALDE 159



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 35/159 (22%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A+++ LK +  +  L L   QIG SG + +A  L+ N T++ L L  N + D 
Sbjct: 9   IGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNNQIGDS 68

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                           G + +A+S K  NE LT + LA N I D
Sbjct: 69  --------------------------------GVQAIAKSLKA-NETLTGLHLAGNRIGD 95

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            GA AIA+ LK N    +T L+L  N +   G   + +A
Sbjct: 96  AGAQAIAEVLKVNS--TLTELSLHENQIGDVGAQGVAEA 132



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 10/98 (10%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+A    + + ++G   GD G   +AE L  N T  E+S   N I   G +     
Sbjct: 73  IAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGDVGAQGVAEA 132

Query: 214 LQSNIALKTLNLSGNPIG-------DEGVKCLCDILVD 244
           L+ N  L  L+L  N IG       DE  K  C I +D
Sbjct: 133 LKVNSKLNQLSLRSNCIGNLGFQALDETSKVTCRIEID 170


>gi|399497912|emb|CCG20284.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 124/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|301605002|ref|XP_002932147.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Xenopus (Silurana) tropicalis]
          Length = 490

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 1/212 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L+ N+ I +L L+ N+ G  GA A+A+ L+ N  + E+HL  N +G +G +AL S
Sbjct: 168 ALAVTLVTNTRIVTLDLSDNWLGGEGAAAIAEMLKENCYISEIHLADNKLGVKGAKAL-S 226

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            +      L  L++  N  S + A +++E   + + +   +L  N  G+   E +  A+ 
Sbjct: 227 HMLVENTTLQKLNLSGNEFSDEAAQYISEAFMSNQKVECTDLSHNMFGEGSGETLGTAIA 286

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +N  +  ++L  NN   KGA+AIAR L  N  + ++DL+YN  G DGA AL E LK +  
Sbjct: 287 ENTGMLELNLSWNNFRGKGAAAIARGLGANIFLKAIDLSYNGFGNDGAAALGEALKVNNV 346

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  + +   +I   GA   A  L+ N T+ IL
Sbjct: 347 LEDINISNNRISVQGAVRFAMCLKANKTLRIL 378



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 1/221 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     G +    LA +L  N     +  + N +   G  A   +L+ N  +  ++L+ N
Sbjct: 156 MRHHGLGPQATKALAVTLVTNTRIVTLDLSDNWLGGEGAAAIAEMLKENCYISEIHLADN 215

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            +G +G K L  +LV+N  +++L LS  +  DE A+ I+E   +N  +   +L++NM   
Sbjct: 216 KLGVKGAKALSHMLVENTTLQKLNLSGNEFSDEAAQYISEAFMSNQKVECTDLSHNMFGE 275

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
               +L  A+ EN+ +  L+L+ N     GA A+A+GL  N  L+ + L  N  G++G  
Sbjct: 276 GSGETLGTAIAENTGMLELNLSWNNFRGKGAAAIARGLGANIFLKAIDLSYNGFGNDGAA 335

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           AL   L      L  ++I NN IS +GA   A  +K  K+L
Sbjct: 336 ALGEALKVN-NVLEDINISNNRISVQGAVRFAMCLKANKTL 375



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 11/210 (5%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G +  + +A  L  N  I T+DL  N +  +GA+AIA +LK+N  I+ + LA N +G  
Sbjct: 161 LGPQATKALAVTLVTNTRIVTLDLSDNWLGGEGAAAIAEMLKENCYISEIHLADNKLGVK 220

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GAKALS +L  +  +  L L   +     A+++++    N  +   DL  N        G
Sbjct: 221 GAKALSHMLVENTTLQKLNLSGNEFSDEAAQYISEAFMSNQKVECTDLSHNMF------G 274

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
                   +AI     ML  +L  N    +GA  +A+     N  L +IDL++N   +DG
Sbjct: 275 EGSGETLGTAIAENTGMLELNLSWNNFRGKGAAAIARGLG-ANIFLKAIDLSYNGFGNDG 333

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           A A+ +ALK N    +  +N++NN ++  G
Sbjct: 334 AAALGEALKVNN--VLEDINISNNRISVQG 361



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 20/264 (7%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+    +G+     KA    L +N  + TL+LS N +G EG   + ++L +N  +  + L
Sbjct: 153 ELVMRHHGLGPQATKALAVTLVTNTRIVTLDLSDNWLGGEGAAAIAEMLKENCYISEIHL 212

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +   L  +GAKA++ +L  N+ L+ L L+ N         ++EA + N  +    L+ N 
Sbjct: 213 ADNKLGVKGAKALSHMLVENTTLQKLNLSGNEFSDEAAQYISEAFMSNQKVECTDLSHNM 272

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G      L   +  N  + EL+L  N+   +G  A+  GL +    L  +D+  N    
Sbjct: 273 FGEGSGETLGTAIAENTGMLELNLSWNNFRGKGAAAIARGLGANIF-LKAIDLSYNGFGN 331

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  + E +K    L  IN+  N I  +GA + A  LK N+T+                
Sbjct: 332 DGAAALGEALKVNNVLEDINISNNRISVQGAVRFAMCLKANKTL---------------- 375

Query: 434 AIARVLKDNSVITSLDLAYNPIGA 457
              R+LKD  V    D  YN + A
Sbjct: 376 ---RILKDILVNKEFDDLYNTMKA 396



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 28/196 (14%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++D+S    G EG   +AE L  N    E+  A N +   G KA   +L  N  L+ LNL
Sbjct: 181 TLDLSDNWLGGEGAAAIAEMLKENCYISEIHLADNKLGVKGAKALSHMLVENTTLQKLNL 240

Query: 226 SGNPIGDEG-------------VKC---------------LCDILVDNAGVERLQLSSVD 257
           SGN   DE              V+C               L   + +N G+  L LS  +
Sbjct: 241 SGNEFSDEAAQYISEAFMSNQKVECTDLSHNMFGEGSGETLGTAIAENTGMLELNLSWNN 300

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
            R +GA AIA  L  N  L+ ++L+ N     G  +L EAL  N+ +  ++++ N     
Sbjct: 301 FRGKGAAAIARGLGANIFLKAIDLSYNGFGNDGAAALGEALKVNNVLEDINISNNRISVQ 360

Query: 318 GANALAKGLEGNKSLR 333
           GA   A  L+ NK+LR
Sbjct: 361 GAVRFAMCLKANKTLR 376



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 71/163 (43%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  +  + L+    E      +++SG  F DE   +++E+   NQ  E    + N    
Sbjct: 216 KLGVKGAKALSHMLVENTTLQKLNLSGNEFSDEAAQYISEAFMSNQKVECTDLSHNMFGE 275

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              +     +  N  +  LNLS N    +G   +   L  N  ++ + LS     ++GA 
Sbjct: 276 GSGETLGTAIAENTGMLELNLSWNNFRGKGAAAIARGLGANIFLKAIDLSYNGFGNDGAA 335

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           A+ E LK N++L  + ++NN I   G    A  L  N T+R L
Sbjct: 336 ALGEALKVNNVLEDINISNNRISVQGAVRFAMCLKANKTLRIL 378



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ Q ++E     +     D+S   FG+     L  ++  N    E++ + N     G  
Sbjct: 248 EAAQYISEAFMSNQKVECTDLSHNMFGEGSGETLGTAIAENTGMLELNLSWNNFRGKGAA 307

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L +NI LK ++LS N  G++G   L + L  N  +E + +S+  +  +GA   A 
Sbjct: 308 AIARGLGANIFLKAIDLSYNGFGNDGAAALGEALKVNNVLEDINISNNRISVQGAVRFAM 367

Query: 269 LLKNNSILRVLE 280
            LK N  LR+L+
Sbjct: 368 CLKANKTLRILK 379



 Score = 42.4 bits (98), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 37/163 (22%)

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           S   R L+D  ++    + ++ +G    KAL+  L  +  I TL L    +G  GA  +A
Sbjct: 143 SYFLRHLQDPELV----MRHHGLGPQATKALAVTLVTNTRIVTLDLSDNWLGGEGAAAIA 198

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA 552
           +ML+ N  IS + L  N L      G  G         +L HML                
Sbjct: 199 EMLKENCYISEIHLADNKL------GVKGAK-------ALSHML---------------- 229

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
               V N  L  ++L+ NE  D+ A  I++A  +N+ V  T L
Sbjct: 230 ----VENTTLQKLNLSGNEFSDEAAQYISEAFMSNQKVECTDL 268


>gi|443692750|gb|ELT94280.1| hypothetical protein CAPTEDRAFT_227928 [Capitella teleta]
          Length = 389

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++S    K + L G  + D G + L  ++  N  VE   +S  ++  +G+KA+A +L  N
Sbjct: 79  VESQFMSKVMRLRGQGLADAGTRALAVVMAKNNSVEEFDISDNNVHLKGSKALAAMLDTN 138

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  + +++N +   G   +  +L   S  +S+ ++         N +A  LE N S+R
Sbjct: 139 DTITDVNISDNQLGSVGIEEVCSSLASRSKTKSVKMSNVLMCDAAFNHIANLLEVNSSIR 198

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+ L  N++GD    AL   L + +  L VL++  N I  +GA  +A  +KN   L  ++
Sbjct: 199 EIDLSRNTLGDTSAVALGRILENTE-TLEVLNVSWNHIRCQGAKAIANGVKNNVGLTSLD 257

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G +G+  + +AL  NR++  ++L   N+ +  A A+    K+N  + +L L+ N
Sbjct: 258 LSWNGVGAQGSVALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGFKENDTLRTLVLSNN 317

Query: 454 PIGADGAKALSEVLKFHGNINTLK 477
           P+ A     + E L   GN  TLK
Sbjct: 318 PLPASAPMLIVEGLLKTGNT-TLK 340



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 124/236 (52%), Gaps = 3/236 (1%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           +V+ L    +  +G  +LA  + +N+++    ++ N     G+ ALA  L+ N ++ +++
Sbjct: 86  KVMRLRGQGLADAGTRALAVVMAKNNSVEEFDISDNNVHLKGSKALAAMLDTNDTITDVN 145

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF-HVAEYIKNCKSLLWINLY 395
           +  N +G  GI  + S L+SR    +V    +N +    AF H+A  ++   S+  I+L 
Sbjct: 146 ISDNQLGSVGIEEVCSSLASRSKTKSVK--MSNVLMCDAAFNHIANLLEVNSSIREIDLS 203

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N +GD  A  +   L+   T+  +++  N+I  +GA AIA  +K+N  +TSLDL++N +
Sbjct: 204 RNTLGDTSAVALGRILENTETLEVLNVSWNHIRCQGAKAIANGVKNNVGLTSLDLSWNGV 263

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           GA G+ AL E L  + ++  L L  C +  + A  +    + N+T+  L L  N L
Sbjct: 264 GAQGSVALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGFKENDTLRTLVLSNNPL 319



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 29/241 (12%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G+   D G   LA  +  N + EE   + N +   G KA   +L +N  +  +N+S N
Sbjct: 90  LRGQGLADAGTRALAVVMAKNNSVEEFDISDNNVHLKGSKALAAMLDTNDTITDVNISDN 149

Query: 229 PIGDEGVKCLC----------------------------DILVDNAGVERLQLSSVDLRD 260
            +G  G++ +C                            ++L  N+ +  + LS   L D
Sbjct: 150 QLGSVGIEEVCSSLASRSKTKSVKMSNVLMCDAAFNHIANLLEVNSSIREIDLSRNTLGD 209

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
             A A+  +L+N   L VL ++ N I   G  ++A  +  N  + SL L+ N  GA G+ 
Sbjct: 210 TSAVALGRILENTETLEVLNVSWNHIRCQGAKAIANGVKNNVGLTSLDLSWNGVGAQGSV 269

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           AL + L  N+SLR L+L   ++      AL++G       L  L + NN + A     + 
Sbjct: 270 ALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGF-KENDTLRTLVLSNNPLPASAPMLIV 328

Query: 381 E 381
           E
Sbjct: 329 E 329



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 9/203 (4%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D G   +A  + +N ++   D+  NN+H KG+ A+A +L  N  IT ++++ N +G+ 
Sbjct: 95  LADAGTRALAVVMAKNNSVEEFDISDNNVHLKGSKALAAMLDTNDTITDVNISDNQLGSV 154

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           G + +   L       ++K+    +  +    +A++L  N++I  +DL  N L D     
Sbjct: 155 GIEEVCSSLASRSKTKSVKMSNVLMCDAAFNHIANLLEVNSSIREIDLSRNTLGDTSAVA 214

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
              +      + + + +   ++  N++  QGAK +A   K  N  LTS+DL++N +   G
Sbjct: 215 LGRI------LENTETLEVLNVSWNHIRCQGAKAIANGVK-NNVGLTSLDLSWNGVGAQG 267

Query: 577 AFAIAQALKANEDVAVTSLNLAN 599
           + A+ +AL +N  + V +L+  N
Sbjct: 268 SVALGEALSSNRSLRVLNLSRCN 290



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 91/191 (47%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + V++S    G  G+  +  SL      + V  +   +  A       +L+ N +++ +
Sbjct: 141 ITDVNISDNQLGSVGIEEVCSSLASRSKTKSVKMSNVLMCDAAFNHIANLLEVNSSIREI 200

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N +GD     L  IL +   +E L +S   +R +GAKAIA  +KNN  L  L+L+ 
Sbjct: 201 DLSRNTLGDTSAVALGRILENTETLEVLNVSWNHIRCQGAKAIANGVKNNVGLTSLDLSW 260

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +   G  +L EAL  N ++R L+L+        A AL  G + N +LR L L  N + 
Sbjct: 261 NGVGAQGSVALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGFKENDTLRTLVLSNNPLP 320

Query: 344 DEGIRALMSGL 354
                 ++ GL
Sbjct: 321 ASAPMLIVEGL 331



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 5/163 (3%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
            N  A  L   SS+   D+S    GD     L   L   +T E ++ + N I   G KA 
Sbjct: 184 FNHIANLLEVNSSIREIDLSRNTLGDTSAVALGRILENTETLEVLNVSWNHIRCQGAKAI 243

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              +++N+ L +L+LS N +G +G   L + L  N  +  L LS  ++    A A+    
Sbjct: 244 ANGVKNNVGLTSLDLSWNGVGAQGSVALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGF 303

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNG 311
           K N  LR L L+NN +  S    + E LL+  N+T++S+H  G
Sbjct: 304 KENDTLRTLVLSNNPLPASAPMLIVEGLLKTGNTTLKSVHFEG 346


>gi|149068415|gb|EDM17967.1| rCG39476, isoform CRA_b [Rattus norvegicus]
          Length = 990

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 4/308 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTL 223
           + +D+   + GD G+  L E+L Y      V    +  +     +     LQSN +L  L
Sbjct: 630 THLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRSLVFL 689

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NLS N + ++GVK LC++L + N  +ERL L+S  L   G + ++  L     L  L L 
Sbjct: 690 NLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTHLCLA 749

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N+++  G   L+  L     T++SL L   Y   +G+  L+  L+ NKSL  L L  N 
Sbjct: 750 HNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNK 809

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G++ L   L      L  L++    ++++    +A  + N  +L  ++L  N + D
Sbjct: 810 LADSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDD 869

Query: 402 EGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G   + +AL+  N  I  + L    +       +  +L +N  +  ++L  N +  +  
Sbjct: 870 AGLNILCEALRNPNCQIRRLGLENCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAI 929

Query: 461 KALSEVLK 468
           + L +VL+
Sbjct: 930 RNLCKVLR 937



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 140/303 (46%), Gaps = 6/303 (1%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           N  +  L+L    +GD GVK LC+ L      +  L+L S DL     + +++ L++N  
Sbjct: 626 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRS 685

Query: 276 LRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L  L L+ N +   G  SL E L   N  +  L L       +G   L+  L   K L  
Sbjct: 686 LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTH 745

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N + DEGI  L   L   +  L  L +     +  G+ H++  ++N KSL+ ++L
Sbjct: 746 LCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDL 805

Query: 395 YMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N + D G + +   L+Q N  +  ++L G  + S+    +A VL +NS + +LDL  N
Sbjct: 806 GFNKLADSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNN 865

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +   G   L E L+ + N    +LG   C +     + + D+L  N ++  ++L  N L
Sbjct: 866 ILDDAGLNILCEALR-NPNCQIRRLGLENCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSL 924

Query: 512 RDE 514
             E
Sbjct: 925 DYE 927



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 94/193 (48%), Gaps = 5/193 (2%)

Query: 176 DEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           DEG+  L+ +L + + T + +       T  G +     LQ+N +L  L+L  N + D G
Sbjct: 755 DEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLADSG 814

Query: 235 VKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           VK LC  L   N  ++ L+L    L  E    +A +L NNS L  L+L NN++D +G   
Sbjct: 815 VKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDDAGLNI 874

Query: 294 LAEALL-ENSTIRSLHLNGNYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           L EAL   N  IR L L  N G   G    L   L  N+S+ +++L  NS+  E IR L 
Sbjct: 875 LCEALRNPNCQIRRLGLE-NCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAIRNLC 933

Query: 352 SGLSSRKGKLAVL 364
             L S   K+  L
Sbjct: 934 KVLRSPTCKMEFL 946



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 15/281 (5%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++  L L    +GD G++ L   L  +  KL VL + +  ++     ++++ +++ +S
Sbjct: 626 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRS 685

Query: 389 LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L+++NL  N + ++G + + + L+  N  +  + L    +   G   ++  L     +T 
Sbjct: 686 LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTH 745

Query: 448 LDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           L LA+N +  +G + LS  L+     + +L L  C     G+E ++  L+ N ++  LDL
Sbjct: 746 LCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDL 805

Query: 507 RANGLRDEVCSG----CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
             N L D   SG    C  L   +  +  L+ M     C+   +    LA S  V N  L
Sbjct: 806 GFNKLAD---SGVKLLCQTLQQPNCNLQELELM----GCVLTSEACGDLA-SVLVNNSNL 857

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
            ++DL  N + D G   + +AL+ N +  +  L L N  LT
Sbjct: 858 WNLDLGNNILDDAGLNILCEALR-NPNCQIRRLGLENCGLT 897



 Score = 38.9 bits (89), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           VL  N  +  +DL  + +     K L+E    H   N  K+ +  +    + +    L +
Sbjct: 567 VLHTNESLLEMDLYESRLDESLMKILNEEFS-HPKCNLQKVMFRAVCFLNSCYDFSFLAF 625

Query: 498 NNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
           NNT++ LDL+   L D  V + C  L +    +  L+ +    L + + Q      QS  
Sbjct: 626 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLR-LESCDLNVTHCQNLSKALQS-- 682

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG----QSALTD 612
             N +L  ++L+ N + +DG  ++ + L+ N +  +  L LA+  LTK G     SALT 
Sbjct: 683 --NRSLVFLNLSTNSLSNDGVKSLCEVLE-NPNCPLERLALASCGLTKVGCEVLSSALTK 739

Query: 613 AKDLVY 618
            K L +
Sbjct: 740 TKRLTH 745


>gi|399497884|emb|CCG20270.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|399497872|emb|CCG20264.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497890|emb|CCG20273.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|19882273|gb|AAL15549.1| maternal-antigen-that-embryos-require protein [Homo sapiens]
          Length = 1200

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 4/306 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R   S+++ G +  +E +    E+L + +   E +     G+T A       +L ++ +L
Sbjct: 837  RNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDCCGLTHACYLKISQILTTSPSL 896

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GV  L D L V    +++L L    +   G +++A  L +N  L  L
Sbjct: 897  KSLSLAGNKVTDQGVTPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHL 956

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+NN +   G   L  ++ L + +++ L LN  +    G  +LA  L GN  L  L L 
Sbjct: 957  CLSNNSLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGSLALALMGNSWLTHLSLS 1016

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G++ L   +      L  L++    ++A     ++  I   + L  ++L  N 
Sbjct: 1017 MNPVEDNGVKLLCEVMREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNA 1076

Query: 399  IGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +GD G   + + LKQ N  +T + L    + S    A++  L  N  +TSL+L  N    
Sbjct: 1077 LGDGGVAALCEGLKQKNSVLTRLGLKACGLTSDCCEALSLALSCNRHLTSLNLVQNNFSP 1136

Query: 458  DGAKAL 463
             G   L
Sbjct: 1137 KGMMKL 1142



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 154/360 (42%), Gaps = 11/360 (3%)

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
            L +E  +    +L  +  LR L+L ++++      +L   L   +      +  N     
Sbjct: 765  LIEEQWEDFCSMLGTHPHLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLMFRNAQITP 824

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G   L + +  N++LR L+L G  + +E +R     L   K  L  L +    ++     
Sbjct: 825  GVQHLWRIVMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDCCGLTHACYL 884

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
             +++ +    SL  ++L  N + D+G   ++DAL+ ++  +  + L    I + G  ++A
Sbjct: 885  KISQILTTSPSLKSLSLAGNKVTDQGVTPLSDALRVSQCALQKLILEDCGITATGCQSLA 944

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADML 495
              L  N  +T L L+ N +G +G   L   ++  H ++  L L  C +  +G   +A  L
Sbjct: 945  SALVSNRSLTHLCLSNNSLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGSLALAL 1004

Query: 496  RYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK-HMLFYSLCINYLQGAKCLAQS 554
              N+ ++ L L  N + D      NG+      +     H+    L   +L  A C + S
Sbjct: 1005 MGNSWLTHLSLSMNPVED------NGVKLLCEVMREPSCHLQDLELVKCHLTAACCESLS 1058

Query: 555  FKVV-NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              +  +  L S+DL  N + D G  A+ + LK    V +T L L    LT     AL+ A
Sbjct: 1059 CVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKNSV-LTRLGLKACGLTSDCCEALSLA 1117


>gi|399497836|emb|CCG20246.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHIHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS          H     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------NHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +  + +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGH--IHLIEVDMSSNALRRAGARVL 459



 Score = 45.8 bits (107), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L ++  +  + LS ++L DEGA A+A  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           +A  +     +  L L  N     GA  +AK LEG+  L E                   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSSNALRRAGARVLAQT 462

Query: 335 ---------LHLHGNSIGDEGIRAL 350
                    L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|372995364|gb|AEY11256.1| NLRC5 [Gallus gallus]
          Length = 1862

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 139/307 (45%), Gaps = 1/307 (0%)

Query: 203  TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
            T  GI      LQ   A++ LNL    +GD  +  L   L +   ++RL L+   + D+G
Sbjct: 1535 TPTGIDCLITGLQRCQAIEELNLGHMKLGDAAIPKLVFGLCEMPSLKRLILNHNSIGDDG 1594

Query: 263  AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
               +AE L +   +  + L +N I   G  ++A  LLE   ++ + L+GN     G   L
Sbjct: 1595 CSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEMQNLKRIDLSGNCPSPAGGEKL 1654

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
             + L   K L EL L  N  GD G    ++       +L +L + +N+I   G   +A  
Sbjct: 1655 MEALANCKHLEELILSRNDFGD-GTAVKLALCLPHMNRLKILHLQHNNIGPAGGTELARA 1713

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            +  C+ L  I+L  N++G+ G   +++ L +   +  I+L    I    +  ++R  +  
Sbjct: 1714 LMACELLEEISLSENNLGEGGIRALSEGLPRFEHLRKIELRLCGITDDASKLLSRGFQQC 1773

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
              +  + L++N +G  GA+ L+ +L     +  L L    IGA GA  +A+ L     I 
Sbjct: 1774 PAVEEIILSWNALGDGGAQVLASILPGMETLKMLDLEKNLIGACGATRLAEELVRCPEIQ 1833

Query: 503  ILDLRAN 509
             + L  N
Sbjct: 1834 FIRLWDN 1840



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 135/305 (44%), Gaps = 29/305 (9%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
            E+ +   + ++  + GD+G   LAE+L      EE++   N I   G+     VL     
Sbjct: 1576 EMPSLKRLILNHNSIGDDGCSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEMQN 1635

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            LK ++LSGN     G + L + L +   +E L LS  D  D  A  +A  L + + L++L
Sbjct: 1636 LKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDFGDGTAVKLALCLPHMNRLKIL 1695

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I  +G T LA AL+    +  + L+ N  G  G  AL++GL   + LR++ L  
Sbjct: 1696 HLQHNNIGPAGGTELARALMACELLEEISLSENNLGEGGIRALSEGLPRFEHLRKIELRL 1755

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
              I D+  + L  G                              + C ++  I L  N +
Sbjct: 1756 CGITDDASKLLSRGF-----------------------------QQCPAVEEIILSWNAL 1786

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            GD GA+ +A  L    T+  +DL  N I + GA+ +A  L     I  + L  NP+    
Sbjct: 1787 GDGGAQVLASILPGMETLKMLDLEKNLIGACGATRLAEELVRCPEIQFIRLWDNPVPKGL 1846

Query: 460  AKALS 464
            A++L+
Sbjct: 1847 AESLT 1851



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 29/300 (9%)

Query: 238  LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
            L  IL+    +++ +L+S      G   +   L+    +  L L +  +  +    L   
Sbjct: 1514 LVSILLPLPDLKKFELTSCSFTPTGIDCLITGLQRCQAIEELNLGHMKLGDAAIPKLVFG 1573

Query: 298  LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L E  +++ L LN N  G  G + LA+ L     + E++L  N IGD G+  + + L   
Sbjct: 1574 LCEMPSLKRLILNHNSIGDDGCSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEM 1633

Query: 358  KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
            +  L  +D+  N  S  G   + E + NCK L  + L  ND GD  A K+A  L     +
Sbjct: 1634 QN-LKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDFGDGTAVKLALCLPHMNRL 1692

Query: 418  TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
              + L  NNI   G + +AR L    ++  + L+ N +G  G +ALSE L    ++  ++
Sbjct: 1693 KILHLQHNNIGPAGGTELARALMACELLEEISLSENNLGEGGIRALSEGLPRFEHLRKIE 1752

Query: 478  ----------------------------LGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
                                        L W  +G  GA+ +A +L    T+ +LDL  N
Sbjct: 1753 LRLCGITDDASKLLSRGFQQCPAVEEIILSWNALGDGGAQVLASILPGMETLKMLDLEKN 1812



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 153/370 (41%), Gaps = 39/370 (10%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            ++ L+ S V+L D+    ++ LL     L+  EL +     +G   L   L     I  L
Sbjct: 1497 LQELRWSHVELHDDTEMLVSILLPLPD-LKKFELTSCSFTPTGIDCLITGLQRCQAIEEL 1555

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L     G      L  GL    SL+ L L+ NSIGD+G   L   LSS    +  +++G
Sbjct: 1556 NLGHMKLGDAAIPKLVFGLCEMPSLKRLILNHNSIGDDGCSRLAEALSSMHC-MEEINLG 1614

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            +N I   G  ++A  +   ++L  I+L  N     G EK+ +AL   + +  + L  N+ 
Sbjct: 1615 HNKIGDLGLINIAAVLLEMQNLKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDF 1674

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
                A  +A  L   + +  L L +N IG  G   L+  L     +  + L    +G  G
Sbjct: 1675 GDGTAVKLALCLPHMNRLKILHLQHNNIGPAGGTELARALMACELLEEISLSENNLGEGG 1734

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG 547
               +++ L     +  ++LR  G+ D+                                 
Sbjct: 1735 IRALSEGLPRFEHLRKIELRLCGITDD--------------------------------A 1762

Query: 548  AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
            +K L++ F+    A+  I L++N + D GA  +A  L   E + +  L+L  N +   G 
Sbjct: 1763 SKLLSRGFQQC-PAVEEIILSWNALGDGGAQVLASILPGMETLKM--LDLEKNLIGACGA 1819

Query: 608  SALTDAKDLV 617
            + L  A++LV
Sbjct: 1820 TRL--AEELV 1827



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 97/468 (20%), Positives = 160/468 (34%), Gaps = 122/468 (26%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF------------- 210
             S VD+S    GDEG  FL E+L +   +++++ + N ++  GI +              
Sbjct: 908  LSEVDLSDNKLGDEGCSFLLENLSWISISKQLNLSHNLLSVTGIYSLLKAVNTCQRVVEV 967

Query: 211  ---------------DGVL-----------------------QSNIALKTLNLSGNPIGD 232
                           DG                         Q+ +  K + L+      
Sbjct: 968  EVSLYHNTAVLRFTEDGEFASPPASREEPLYPTDDQWDDKENQTPVPSKKIRLTYCRFQA 1027

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
              ++ LC +L +   +  L LS+  L DEG   + + L N   LR L+LNNN +  S   
Sbjct: 1028 SDLEKLCAVLKECGSISELDLSNNYLGDEGLAQLLQFLPNLKTLRSLKLNNNHLSLSSVF 1087

Query: 293  SLAEALLENSTIRSLHL------------------------------------NGN---- 312
             LA++L     + ++ L                                    NG     
Sbjct: 1088 CLAQSLCTLEHLETMDLSLGRMQVVHLTFGDRIRLRRTSRWRRSFLVHPKHVTNGQCFRL 1147

Query: 313  ---YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
                 G      L + L     L E+ L GN++ D+ I  L+S L     +L +L I NN
Sbjct: 1148 RNCTVGPEDVTRLCQMLTQCTQLTEIDLCGNALNDQSIERLLSFL-PHFCQLTLLSIRNN 1206

Query: 370  SISAKGAFHVAEYIKNCKSLLWINLYMND-----------------------IGDEGAEK 406
            + S   A   A  I  C+ +  + +  +                        IG    EK
Sbjct: 1207 TFSPCCAVLFANSINLCERIRRVEVRSSQNAFLHLRTSTQSQKTSCRLTDCAIGQRQIEK 1266

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
            +   L+Q+  +  +DL  N +  +    +   L    V  SL+L++N I   G   L   
Sbjct: 1267 LCRVLEQHGCLAELDLSRNQLGDEVLRFLLDHLHRVPVTCSLNLSHNRISQRGVLHLINT 1326

Query: 467  LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                GN   +++  C    S A  +  M   ++   IL L     + E
Sbjct: 1327 FTTSGNTTEVQVSLC----SKATLIIKMTSRDDPRKILRLTECSFQPE 1370



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 151/364 (41%), Gaps = 52/364 (14%)

Query: 156  EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
            E     R    +    R FGD+    L++ LG   + +++      ITAAG+      L 
Sbjct: 719  EMLASCRNVEHLSFRSRRFGDDFAAALSKGLGEMGSLKKLEVTGGSITAAGLTDMVQALS 778

Query: 216  SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE---LLKN 272
              + L+ +NL  N I +  VK + ++      ++++ LS   L       +A+     +N
Sbjct: 779  HCLQLEEINLQDNRIQNPDVKTVMELFSRMEKLKKIDLSKNSLSLNAVLLLAKEFIACQN 838

Query: 273  NSILRVLELNNNMIDYSGFT-----SL-------AEALLENSTIRSLHLNGNYGGALGAN 320
             + L V + +  +I +SG +     SL        E +     +R L L      +  A 
Sbjct: 839  AAELHVRK-DTVIISFSGPSGKVPRSLDLKREQNKECVTPTRHLR-LCLQARCLSSQHAK 896

Query: 321  ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----SRKGKLAVLDIGNNSISAKGA 376
             +   L+    L E+ L  N +GDEG   L+  LS    S++     L++ +N +S  G 
Sbjct: 897  EIVSILQSCPHLSEVDLSDNKLGDEGCSFLLENLSWISISKQ-----LNLSHNLLSVTGI 951

Query: 377  FHVAEYIKNCKSL--LWINLYMNDI----------------GDEGAEKIADAL--KQNRT 416
            + + + +  C+ +  + ++LY N                   +E      D    K+N+T
Sbjct: 952  YSLLKAVNTCQRVVEVEVSLYHNTAVLRFTEDGEFASPPASREEPLYPTDDQWDDKENQT 1011

Query: 417  ITT---IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
                  I L      +     +  VLK+   I+ LDL+ N +G +G   L+++L+F  N+
Sbjct: 1012 PVPSKKIRLTYCRFQASDLEKLCAVLKECGSISELDLSNNYLGDEG---LAQLLQFLPNL 1068

Query: 474  NTLK 477
             TL+
Sbjct: 1069 KTLR 1072



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 27/223 (12%)

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
           G  L  + L + L   +++  L       GD+   AL  GL    G L  L++   SI+A
Sbjct: 710 GCPLDTDCL-EMLASCRNVEHLSFRSRRFGDDFAAALSKGLG-EMGSLKKLEVTGGSITA 767

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            G   + + + +C  L  INL  N I +   + + +   +   +  IDL  N++      
Sbjct: 768 AGLTDMVQALSHCLQLEEINLQDNRIQNPDVKTVMELFSRMEKLKKIDLSKNSLSLNAVL 827

Query: 434 AIARV-----------LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN----INTLKL 478
            +A+            ++ ++VI S        G  G    S  LK   N      T  L
Sbjct: 828 LLAKEFIACQNAAELHVRKDTVIISFS------GPSGKVPRSLDLKREQNKECVTPTRHL 881

Query: 479 GWC----QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
             C     + +  A+ +  +L+    +S +DL  N L DE CS
Sbjct: 882 RLCLQARCLSSQHAKEIVSILQSCPHLSEVDLSDNKLGDEGCS 924


>gi|257468329|ref|NP_001028603.1| NACHT, LRR and PYD domains-containing protein 12 [Mus musculus]
 gi|410591643|sp|E9Q5R7.1|NAL12_MOUSE RecName: Full=NACHT, LRR and PYD domains-containing protein 12;
            AltName: Full=Monarch-1; AltName: Full=PYRIN-containing
            APAF1-like protein 7; Short=PYPAF7
          Length = 1054

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 147/317 (46%), Gaps = 15/317 (4%)

Query: 216  SNIALKTLNLSGNPIGDEGVKCLCDIL------VDNAGVERLQLSSVDLRDEGAKAIAEL 269
            +N  L  L L  N +G +GV+ LC  L      + N  ++R Q+S    +D  A  IA  
Sbjct: 704  TNSNLIELALYRNALGSQGVRLLCQGLRHASCKLQNLRLKRCQISGSACQDLAAAVIA-- 761

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEG 328
              N +++R L+L++N I   G   L E L      ++ + L      A    +LA  L  
Sbjct: 762  --NRNLIR-LDLSDNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSN 818

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N  L EL L GN + D G++ L  GL     +L  L +    +       +A  +K  +S
Sbjct: 819  NSYLVELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQS 878

Query: 389  LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            LL ++L +ND+GD G   + + L   +  + T+ LG   + S     IA VL+ N+ +  
Sbjct: 879  LLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQE 938

Query: 448  LDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            LDL++N +G  G + L E L+     +  L L  C + +   E ++ +L  + T+  L L
Sbjct: 939  LDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDNCGLTSKACEDLSSILGISQTLHELYL 998

Query: 507  RANGLRDE-VCSGCNGL 522
              N L D  VC  C  L
Sbjct: 999  TNNALGDTGVCLLCKRL 1015



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 11/279 (3%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L EL L+ N++G +G+R L  GL     KL  L +    IS      +A  +   ++
Sbjct: 705 NSNLIELALYRNALGSQGVRLLCQGLRHASCKLQNLRLKRCQISGSACQDLAAAVIANRN 764

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L+ ++L  N IG  G E + + L+  R  +  I L    + +    ++A VL +NS +  
Sbjct: 765 LIRLDLSDNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYLVE 824

Query: 448 LDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           LDL  NP+   G K L + L+     + TL L  C +G +  E +A  L+ N ++  LDL
Sbjct: 825 LDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQSLLELDL 884

Query: 507 RANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA-QSFKVVNEALTS 564
             N L D  V   C GLS     + +L+      L I  L    C+   S   VN  L  
Sbjct: 885 GLNDLGDSGVLLLCEGLSHPDCKLQTLR------LGICRLGSVACVGIASVLQVNTCLQE 938

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
           +DL+FN++ D G   + + L+ ++   +  L L N  LT
Sbjct: 939 LDLSFNDLGDRGLQLLGEGLR-HQTCRLQKLWLDNCGLT 976



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 137/302 (45%), Gaps = 4/302 (1%)

Query: 174  FGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G +G+  L + L +     + +      I+ +  +     + +N  L  L+LS N IG 
Sbjct: 718  LGSQGVRLLCQGLRHASCKLQNLRLKRCQISGSACQDLAAAVIANRNLIRLDLSDNSIGV 777

Query: 233  EGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             G++ LC+ L      ++ +QL    L     +++A +L NNS L  L+L  N ++ SG 
Sbjct: 778  PGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYLVELDLTGNPLEDSGL 837

Query: 292  TSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +R+L L   + G      LA  L+ N+SL EL L  N +GD G+  L
Sbjct: 838  KLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQSLLELDLGLNDLGDSGVLLL 897

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GLS    KL  L +G   + +     +A  ++    L  ++L  ND+GD G + + + 
Sbjct: 898  CEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLSFNDLGDRGLQLLGEG 957

Query: 411  LK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+ Q   +  + L    + SK    ++ +L  +  +  L L  N +G  G   L + L+ 
Sbjct: 958  LRHQTCRLQKLWLDNCGLTSKACEDLSSILGISQTLHELYLTNNALGDTGVCLLCKRLRH 1017

Query: 470  HG 471
             G
Sbjct: 1018 PG 1019



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D++G    D GL  L + L +       +      +  A  +     L+ N +L  L+L
Sbjct: 825  LDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQSLLELDL 884

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
              N +GD GV  LC+ L   +  ++ L+L    L       IA +L+ N+ L+ L+L+ N
Sbjct: 885  GLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLSFN 944

Query: 285  MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +   G   L E L   +  ++ L L+     +     L+  L  +++L EL+L  N++G
Sbjct: 945  DLGDRGLQLLGEGLRHQTCRLQKLWLDNCGLTSKACEDLSSILGISQTLHELYLTNNALG 1004

Query: 344  DEGIRALMSGLSSRKGKLAVL 364
            D G+  L   L     KL VL
Sbjct: 1005 DTGVCLLCKRLRHPGCKLRVL 1025


>gi|440902432|gb|ELR53224.1| T-complex-associated testis-expressed protein 1 [Bos grunniens
           mutus]
          Length = 502

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 258 EWNLFLFTYRDCHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSH 317

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 318 NLIGDRGARAAAKLLS--HSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCI 375

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL  N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 376 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTTLTSINLSCNHIGLDG 435

Query: 460 AKALSE 465
            K L E
Sbjct: 436 GKQLLE 441



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 2/197 (1%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK   L+ + + D+  + L   L+D+  +E L LS   + D GA+A A+LL ++S LRV
Sbjct: 281 TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLL-SHSRLRV 339

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L NN +   G  SLA AL  NS + SL+L  N     G  ALA  L  NK L  LHL 
Sbjct: 340 LNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLG 399

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN +  E    L+S + +    L  +++  N I   G   + E + + K+LL  +L ++D
Sbjct: 400 GNELS-EPTATLLSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 458

Query: 399 IGDEGAEKIADALKQNR 415
           I  E    I  AL  NR
Sbjct: 459 IAQESEYLIGQALCANR 475



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           RL  S VD  D+ A+ +   L ++  L  L+L++N+I   G  + A+ LL +S +R L+L
Sbjct: 286 RLTRSKVD--DDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAK-LLSHSRLRVLNL 342

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA++LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 343 ANNQVRAPGAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKC-LTTLHLGGN 401

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  ++I  
Sbjct: 402 ELSEPTATLLSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDIAQ 461

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 462 ESEYLIGQALCAN 474



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 257 FEWNLFLFTYRDCHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 316

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ LNL+ N +   G   L   L  N+ +  L L    +
Sbjct: 317 HNLIGDRGARAAAKLL-SHSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCI 375

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L  N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 376 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTTLTSINLSCNHIGLDG 435

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + I  E
Sbjct: 436 GKQLLEGMSDNKTLLEFDLRLSDIAQE 462



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 250 VKDCGMNFEWNLFLFTYRD--CHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDH 307

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L  H  +  L L   Q+ A GA  +A  L +N+ + 
Sbjct: 308 PALEELDLSHNLIGDRGARAAAKLLS-HSRLRVLNLANNQVRAPGAHSLAHALGHNSNLI 366

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+++ K +    L  N L +    L      +N  
Sbjct: 367 SLNLRLNCIEDE-----GGQALAH-ALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTT 420

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 421 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 458



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 54/124 (43%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G   LA +LG+N     ++   N I   G +A    L +N  L TL+L GN + +     
Sbjct: 351 GAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLGGNELSEPTATL 410

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L  +L  N  +  + LS   +  +G K + E + +N  L   +L  + I       + +A
Sbjct: 411 LSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDIAQESEYLIGQA 470

Query: 298 LLEN 301
           L  N
Sbjct: 471 LCAN 474


>gi|399498020|emb|CCG20338.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A S K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399498028|emb|CCG20342.1| Ran GTPase activating protein 2 [Solanum stenotomum]
          Length = 553

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEGLFLVNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N  +A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDTTAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEGLFLVNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N    E            S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDTTAEAAPA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             N  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      E +
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEGL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLVNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN    E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDTTAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N        +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDTTAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEGLFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 VNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+   + A AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDTTAEAAPAIASCIAAKQLLAKLSL 418


>gi|157827405|ref|YP_001496469.1| hypothetical protein A1I_05525 [Rickettsia bellii OSU 85-389]
 gi|157802709|gb|ABV79432.1| Leucine-rich repeat protein [Rickettsia bellii OSU 85-389]
          Length = 594

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 178/373 (47%), Gaps = 41/373 (10%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S  N G+  +  LA++L   Q    +  + N I   G+K    +L+ +  + TLNL  N
Sbjct: 16  LSLSNIGEGDVKSLAQALKGTQITR-LDLSNNNIGCNGLKYLTQILR-DTQITTLNLKNN 73

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV---------- 278
            I DEGVK L + L +   +  L LS   +  + A+ + ++L N  +  +          
Sbjct: 74  NIMDEGVKYLTESLKE-IQITELDLSENKIGSDAAQYLNKMLSNTKMRSLYLDIHYTEDG 132

Query: 279 ------------------LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
                             + ++NN I   G   L +   +N  I  L L+     A  A 
Sbjct: 133 DVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTF-QNIAIAELTLDSQNLEADDAQ 191

Query: 321 ALAKGLEGNKSLRELHLHGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            LA+  +  K + EL +  N I    GI+ L+     +  ++A L++    I   G  ++
Sbjct: 192 YLAQAFKDTK-ISELKMSYNHIMQLNGIQYLVQAF--KDSQIAKLNVHAEKIRTTGVKYL 248

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE++K  K +L ++L +N IGDEG + +A ALK N  I  IDL  ++I ++GA  +A +L
Sbjct: 249 AEFLKEVK-VLDLDLRLNYIGDEGMKYLAPALK-NSDIMYIDLAWDDIEAEGARYLAEIL 306

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           + NS I  +DL  N IGADGA+ L++ L +   +  + L    I  +G +++ D++  N 
Sbjct: 307 Q-NSKILFIDLCNNSIGADGARYLADGLPY-SQVTGIHLHGNMIEYAGYQYLIDVVD-NT 363

Query: 500 TISILDLRANGLR 512
            IS ++L  N + 
Sbjct: 364 NISWVNLHCNNIE 376



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 37/320 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++   N  DEG+ +L ESL   Q   E+  + N I +   +  + +L SN  +++L
Sbjct: 65  ITTLNLKNNNIMDEGVKYLTESLKEIQIT-ELDLSENKIGSDAAQYLNKML-SNTKMRSL 122

Query: 224 NLSGNPIGDEGV------KCLCDI----------------------LVDNAGVERLQLSS 255
            L  +   D  V      +  CDI                         N  +  L L S
Sbjct: 123 YLDIHYTEDGDVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTFQNIAIAELTLDS 182

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            +L  + A+ +A+  K+  I  +    N+++  +G   L +A  ++S I  L+++     
Sbjct: 183 QNLEADDAQYLAQAFKDTKISELKMSYNHIMQLNGIQYLVQA-FKDSQIAKLNVHAEKIR 241

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G   LA+ L+  K L +L L  N IGDEG++ L   L  +   +  +D+  + I A+G
Sbjct: 242 TTGVKYLAEFLKEVKVL-DLDLRLNYIGDEGMKYLAPAL--KNSDIMYIDLAWDDIEAEG 298

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A ++AE ++N K +L+I+L  N IG +GA  +AD L  ++ +T I L GN I   G   +
Sbjct: 299 ARYLAEILQNSK-ILFIDLCNNSIGADGARYLADGLPYSQ-VTGIHLHGNMIEYAGYQYL 356

Query: 436 ARVLKDNSVITSLDLAYNPI 455
             V+ DN+ I+ ++L  N I
Sbjct: 357 IDVV-DNTNISWVNLHCNNI 375



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 182/390 (46%), Gaps = 42/390 (10%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K + D L DN     L LS++   D   K++A+ LK   I R L+L+NN I  +G   L 
Sbjct: 4   KTMIDNLKDNHS---LSLSNIGEGD--VKSLAQALKGTQITR-LDLSNNNIGCNGLKYLT 57

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           + +L ++ I +L+L  N     G   L + L+    + EL L  N IG +  + L   LS
Sbjct: 58  Q-ILRDTQITTLNLKNNNIMDEGVKYLTESLK-EIQITELDLSENKIGSDAAQYLNKMLS 115

Query: 356 SRKGKLAVLDIG-------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           + K +   LDI        N  IS +        IKN    + I ++ N IG +GA+ + 
Sbjct: 116 NTKMRSLYLDIHYTEDGDVNKYISQRSYCD----IKN----IHITIHNNKIGIKGAQYLN 167

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI-GADGAKALSEVL 467
               QN  I  + L   N+ +  A  +A+  KD + I+ L ++YN I   +G + L +  
Sbjct: 168 KTF-QNIAIAELTLDSQNLEADDAQYLAQAFKD-TKISELKMSYNHIMQLNGIQYLVQAF 225

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
           K    I  L +   +I  +G +++A+ L+    +  LDLR N + DE      G+ +   
Sbjct: 226 K-DSQIAKLNVHAEKIRTTGVKYLAEFLKEVKVLD-LDLRLNYIGDE------GMKYLAP 277

Query: 528 AIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           A+ +   +++  L  + ++  GA+ LA+  +  N  +  IDL  N I  DGA  +A  L 
Sbjct: 278 ALKN-SDIMYIDLAWDDIEAEGARYLAEILQ--NSKILFIDLCNNSIGADGARYLADGLP 334

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
            ++   VT ++L  N +   G   L D  D
Sbjct: 335 YSQ---VTGIHLHGNMIEYAGYQYLIDVVD 361


>gi|399498030|emb|CCG20343.1| Ran GTPase activating protein 2 [Solanum stenotomum]
          Length = 553

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|399497844|emb|CCG20250.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|281354526|gb|EFB30110.1| hypothetical protein PANDA_017872 [Ailuropoda melanoleuca]
          Length = 1031

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 150/333 (45%), Gaps = 18/333 (5%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL------V 243
            QT    S   + +  A  K     L +N  L  L L  N +G  GV+ LC  L      +
Sbjct: 683  QTLPAPSPEKHLLPEAYSKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKL 742

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
             N  ++R  + S   +D  A  +A    N S+ RV +L+ N +   G   L E L     
Sbjct: 743  QNLSLKRCCVPSSACQDLAAALVA----NRSLTRV-DLSCNGLGLPGVRLLCEGLQHPGC 797

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++++ L      A     +A  L  N+ L EL L GN + D G+R L  GL     +L 
Sbjct: 798  RLQAIQLRKCQLEAGACREIASVLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQ 857

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTID 421
            +L +    ++A     +A  +   +SL+ ++L +ND+GD GA  + + L+  + ++ T+ 
Sbjct: 858  ILWLKICHLTAAACEELASTLAVNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVR 917

Query: 422  LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW- 480
            LG   + S     I  VL+ N  +  LDL++N +G  G   L E L+ H      KL W 
Sbjct: 918  LGICRLSSATCEGICTVLRVNPHLRELDLSFNDLGDTGMWPLCEGLR-HPTCRLQKL-WL 975

Query: 481  --CQIGASGAEFVADMLRYNNTISILDLRANGL 511
              C + A   E ++  L  + T++ L L  N L
Sbjct: 976  DSCGLTAKACEDLSSALGVSQTLTELYLTNNAL 1008



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 10/271 (3%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  N +L EL L+ N++G  G+R L  GL     KL  L +    + +     
Sbjct: 700 SKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKLQNLSLKRCCVPSSACQD 759

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   +SL  ++L  N +G  G   + + L+     +  I L    + +     IA 
Sbjct: 760 LAAALVANRSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIAS 819

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
           VL  N  +  LDL  N +   G + L + L+  G  +  L L  C + A+  E +A  L 
Sbjct: 820 VLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLA 879

Query: 497 YNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
            N ++  LDL  N L D      C GL     ++ +++      L I  L  A C     
Sbjct: 880 VNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVR------LGICRLSSATCEGICT 933

Query: 556 KV-VNEALTSIDLAFNEIRDDGAFAIAQALK 585
            + VN  L  +DL+FN++ D G + + + L+
Sbjct: 934 VLRVNPHLRELDLSFNDLGDTGMWPLCEGLR 964



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 3/206 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
            R    +D++G    D GL  L + L +     ++ +     +TAA  +     L  N +L
Sbjct: 825  RHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLAVNRSL 884

Query: 221  KTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+LS N +GD G   LC+ L      ++ ++L    L     + I  +L+ N  LR L
Sbjct: 885  MELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNPHLREL 944

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L+ N +  +G   L E L   +  ++ L L+     A     L+  L  +++L EL+L 
Sbjct: 945  DLSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQTLTELYLT 1004

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVL 364
             N++G+ G+R L  GLS    KL VL
Sbjct: 1005 NNALGNAGVRLLCKGLSHPGCKLQVL 1030



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 7/255 (2%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R+ + VD+S    G  G+  L E L +     + +      + A   +    VL +N  L
Sbjct: 768  RSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIASVLSTNRHL 827

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL---LKNNSILR 277
              L+L+GN + D G++ LC  L  + G  RLQ+  + +    A A  EL   L  N  L 
Sbjct: 828  VELDLTGNVLEDLGLRLLCQGL-RHPGC-RLQILWLKICHLTAAACEELASTLAVNRSLM 885

Query: 278  VLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L+ N +   G   L E L     +++++ L      +     +   L  N  LREL 
Sbjct: 886  ELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNPHLRELD 945

Query: 337  LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
            L  N +GD G+  L  GL     +L  L + +  ++AK    ++  +   ++L  + L  
Sbjct: 946  LSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQTLTELYLTN 1005

Query: 397  NDIGDEGAEKIADAL 411
            N +G+ G   +   L
Sbjct: 1006 NALGNAGVRLLCKGL 1020


>gi|399497840|emb|CCG20248.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|297812113|ref|XP_002873940.1| RANGAP2 [Arabidopsis lyrata subsp. lyrata]
 gi|297319777|gb|EFH50199.1| RANGAP2 [Arabidopsis lyrata subsp. lyrata]
          Length = 543

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S  +L+ L L  + I  E  + + +++     +  L   
Sbjct: 217 LNLSENALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFH 276

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G  +L+EAL   + +  L L  N  
Sbjct: 277 NNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGGIALSEALEHCTHMEKLDLRDNMF 336

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     +L+K L   K L EL+L   ++ DEG  A+++ L      + VL++  N I+ +
Sbjct: 337 GTEAGVSLSKTLSSFKHLTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDITVE 396

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            A  +A  +   + L  +NL  N++ DEG  +IA +++++ + +  ID+  N I   GA 
Sbjct: 397 AASAIAACVAAKQDLKKLNLSENELKDEGCVQIAKSMEEDHSKLQYIDMSTNFIRRAGAR 456

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           A+A V+        L++  N I  +G + L E+ K
Sbjct: 457 ALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFK 491



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 144/299 (48%), Gaps = 19/299 (6%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRA---LMSGLSSRKGKLAVLDIGNNSISAKGA 376
           N  +  L+G+  L  L+L  N++G++G+RA   L+  LSS    L  L + N+ IS + A
Sbjct: 203 NIFSDALQGS-ILSSLNLSENALGEKGVRAFGALLKSLSS----LEELYLMNDGISKEAA 257

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             V+E I + ++L  ++ + N  GDEGA  IA+ +K++  +         + S+G  A++
Sbjct: 258 QAVSELIPSTENLRVLHFHNNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGGIALS 317

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L+  + +  LDL  N  G +   +LS+ L    ++  L L +  +   GA  + + L+
Sbjct: 318 EALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHLTELYLSYLNLEDEGAIAIVNALK 377

Query: 497 YN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--LAQ 553
            + + I +L++  N +  E  S           +  L      +L  N L+   C  +A+
Sbjct: 378 ESASPIEVLEMAGNDITVEAASAIAACVAAKQDLKKL------NLSENELKDEGCVQIAK 431

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           S +  +  L  ID++ N IR  GA A+A  +   E  A   LN+  N +++ G   L +
Sbjct: 432 SMEEDHSKLQYIDMSTNFIRRAGARALAHVVVKKE--AFKLLNIDGNIISEEGIEELKE 488



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 3/245 (1%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ Q ++E          +       GDEG   +AE +  +   E    ++  + + G 
Sbjct: 254 KEAAQAVSELIPSTENLRVLHFHNNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGG 313

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L+    ++ L+L  N  G E    L   L     +  L LS ++L DEGA AI 
Sbjct: 314 IALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHLTELYLSYLNLEDEGAIAIV 373

Query: 268 ELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK + S + VLE+  N I     +++A  +     ++ L+L+ N     G   +AK +
Sbjct: 374 NALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLKKLNLSENELKDEGCVQIAKSM 433

Query: 327 EGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           E + S L+ + +  N I   G RAL + +  +K    +L+I  N IS +G   + E  K 
Sbjct: 434 EEDHSKLQYIDMSTNFIRRAGARAL-AHVVVKKEAFKLLNIDGNIISEEGIEELKEIFKK 492

Query: 386 CKSLL 390
              LL
Sbjct: 493 SPELL 497


>gi|399498082|emb|CCG20369.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|156368361|ref|XP_001627663.1| predicted protein [Nematostella vectensis]
 gi|156214579|gb|EDO35563.1| predicted protein [Nematostella vectensis]
          Length = 163

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 87/158 (55%), Gaps = 3/158 (1%)

Query: 342 IGDEGIRAL-MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           + DE I AL M+ L   K  L  LD+  N IS+KG   +AE +   + L    L  N IG
Sbjct: 5   LADEFIAALAMTQL--HKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIG 62

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DEGA  IA+ALK N T+  +DL  NNI ++GA AIA  L  NS +  L L  N IG +GA
Sbjct: 63  DEGAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGA 122

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            A++  L  +  +  L    C I A GA  +ADML YN
Sbjct: 123 IAIANALMTNSTLKKLNFNTCGIRAVGAAALADMLYYN 160



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 85/159 (53%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
             DE +  LA +  +  +  ++  + N I++ G  A   +L  N  L+T  LS N IGDE
Sbjct: 5   LADEFIAALAMTQLHKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDE 64

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   + + L  N+ ++ L L+  ++ +EGAKAIA  L  NS L+ L L  N I   G  +
Sbjct: 65  GAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIA 124

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           +A AL+ NST++ L+ N     A+GA ALA  L  N  L
Sbjct: 125 IANALMTNSTLKKLNFNTCGIRAVGAAALADMLYYNTEL 163



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 74/132 (56%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  L+LS N I  +G   + ++L  N  +E   LS   + DEGA +IA  LK NS L++
Sbjct: 22  SLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKI 81

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L  N I   G  ++A AL+ NST++ LHL  N  G  GA A+A  L  N +L++L+ +
Sbjct: 82  LDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIAIANALMTNSTLKKLNFN 141

Query: 339 GNSIGDEGIRAL 350
              I   G  AL
Sbjct: 142 TCGIRAVGAAAL 153



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 72/138 (52%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S      +G   +AE L  NQ  E    + N I   G  +    L++N  LK L+L+
Sbjct: 26  LDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKILDLT 85

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IG+EG K + + L+ N+ +++L L   ++ DEGA AIA  L  NS L+ L  N   I
Sbjct: 86  KNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIAIANALMTNSTLKKLNFNTCGI 145

Query: 287 DYSGFTSLAEALLENSTI 304
              G  +LA+ L  N+ +
Sbjct: 146 RAVGAAALADMLYYNTEL 163



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           SL+ ++L +N I  +G   IA+ L +N+ + T  L  N I  +GA +IA  LK NS +  
Sbjct: 22  SLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKI 81

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL  N IG +GAKA++  L  +  +  L L    IG  GA  +A+ L  N+T+  L+  
Sbjct: 82  LDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIAIANALMTNSTLKKLNFN 141

Query: 508 ANGLR 512
             G+R
Sbjct: 142 TCGIR 146



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 1/154 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + DE +  L    +    +  L LS   +  +G  AIAE+L  N  L    L+ N I   
Sbjct: 5   LADEFIAALAMTQLHKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDE 64

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  S+A AL  NST++ L L  N  G  GA A+A  L  N +L++LHL  N+IGDEG  A
Sbjct: 65  GAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIA 124

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + + L +    L  L+     I A GA  +A+ +
Sbjct: 125 IANALMTN-STLKKLNFNTCGIRAVGAAALADML 157



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 60/116 (51%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + DE    +A       ++  +DL  N I SKG  AIA +L  N  + +  L+YN IG +
Sbjct: 5   LADEFIAALAMTQLHKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDE 64

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           GA +++  LK +  +  L L    IG  GA+ +A+ L  N+T+  L L  N + DE
Sbjct: 65  GAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDE 120



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 35/168 (20%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  LDL+ N I + G  A++E+L  +  + T  L + QIG  GA  +A+ L+ N+T+ IL
Sbjct: 23  LIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKIL 82

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
           DL  N + +E                                GAK +A +  + N  L  
Sbjct: 83  DLTKNNIGNE--------------------------------GAKAIANAL-MTNSTLKK 109

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           + L  N I D+GA AIA AL  N    +  LN     +   G +AL D
Sbjct: 110 LHLCENNIGDEGAIAIANALMTNS--TLKKLNFNTCGIRAVGAAALAD 155


>gi|399497832|emb|CCG20244.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497868|emb|CCG20262.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497878|emb|CCG20267.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497894|emb|CCG20275.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497898|emb|CCG20277.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399498120|emb|CCG20388.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|399498068|emb|CCG20362.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSETLEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSETLEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSETLEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|156341516|ref|XP_001620787.1| hypothetical protein NEMVEDRAFT_v1g195848 [Nematostella vectensis]
 gi|156206119|gb|EDO28687.1| predicted protein [Nematostella vectensis]
          Length = 337

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 119/223 (53%), Gaps = 4/223 (1%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           TSL ++L  NST+ ++H+N    G   A+ LAK L  N SL  +++ G  +GD G+ ++ 
Sbjct: 3   TSLFKSLKNNSTLSAIHINFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIA 62

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L      +  L I   +++ +    + E +K+  ++  ++L   +IGD GA  IA  L
Sbjct: 63  EALMVNT-TVRALGIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGL 121

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
            QN T+  I +  + I + G SA+A+V+++   +T LDL+ + IG  GAKA+++V++   
Sbjct: 122 SQNTTLDKIQIKNSGIGATGVSALAKVIQN---VTYLDLSKSIIGTKGAKAIAKVIENCC 178

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +  L++  C I   G   +A  L  N  +  L +   G+ DE
Sbjct: 179 KLKYLRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDE 221



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L  ++++    GD     L  +LVDN  +  + ++   L D G  +IAE L  N
Sbjct: 9   LKNNSTLSAIHINFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEALMVN 68

Query: 274 SILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHL-NGNYGGALGANALAKGLEGNKS 331
           + +R L +   NM   +G  +L E L  N+TI  L L  GN G + GA  +A GL  N +
Sbjct: 69  TTVRALGIRGENMTPEAG-RALGEMLKHNTTITCLSLIQGNIGDS-GALCIASGLSQNTT 126

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L ++ +  + IG  G+ AL   + +    +  LD+  + I  KGA  +A+ I+NC  L +
Sbjct: 127 LDKIQIKNSGIGATGVSALAKVIQN----VTYLDLSKSIIGTKGAKAIAKVIENCCKLKY 182

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + +   +I   G   IA AL +N  +  + +    I  +G   +AR +  +  +  L + 
Sbjct: 183 LRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCKLARSVGKHKSLQVLTIT 242

Query: 452 YNPIGADGAKALSEVLKFHGNINTL 476
           +N I   G +A+ E      ++N L
Sbjct: 243 HNNISEKGKRAIIEACAESQSLNHL 267



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 137/276 (49%), Gaps = 8/276 (2%)

Query: 182 LAESLGYNQT--AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC 239
           L +SL  N T  A  ++F ++G   A       VL  N +L  + ++G  +GD GV  + 
Sbjct: 5   LFKSLKNNSTLSAIHINFYSSGDACA--SELAKVLVDNTSLNAVYIAGAYLGDAGVASIA 62

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           + L+ N  V  L +   ++  E  +A+ E+LK+N+ +  L L    I  SG   +A  L 
Sbjct: 63  EALMVNTTVRALGIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLS 122

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           +N+T+  + +  +  GA G +ALAK ++   ++  L L  + IG +G +A+ + +     
Sbjct: 123 QNTTLDKIQIKNSGIGATGVSALAKVIQ---NVTYLDLSKSIIGTKGAKAI-AKVIENCC 178

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           KL  L I + +I   G   +A+ +    +L  +++    I DEG  K+A ++ +++++  
Sbjct: 179 KLKYLRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCKLARSVGKHKSLQV 238

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           + +  NNI  KG  AI     ++  +  L    +PI
Sbjct: 239 LTITHNNISEKGKRAIIEACAESQSLNHLFHEIDPI 274



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 7/254 (2%)

Query: 139 LSGFTGKLFRESKQTLNEFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS      +       +E AK L    + ++V ++G   GD G+  +AE+L  N T   +
Sbjct: 15  LSAIHINFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEALMVNTTVRAL 74

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
                 +T    +A   +L+ N  +  L+L    IGD G  C+   L  N  ++++Q+ +
Sbjct: 75  GIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLSQNTTLDKIQIKN 134

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +   G  A+A++++N   +  L+L+ ++I   G  ++A+ +     ++ L ++     
Sbjct: 135 SGIGATGVSALAKVIQN---VTYLDLSKSIIGTKGAKAIAKVIENCCKLKYLRIDHCNID 191

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G   +A+ L  N +L EL +    I DEG+  L   +   K  L VL I +N+IS KG
Sbjct: 192 VFGVRDIAQALSKNTNLEELSVACAGIDDEGMCKLARSVGKHK-SLQVLTITHNNISEKG 250

Query: 376 AFHVAEYIKNCKSL 389
              + E     +SL
Sbjct: 251 KRAIIEACAESQSL 264



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 4/254 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++ ++  + GD     LA+ L  N +   V  A   +  AG+ +    L  N  ++ L
Sbjct: 15  LSAIHINFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEALMVNTTVRAL 74

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            + G  +  E  + L ++L  N  +  L L   ++ D GA  IA  L  N+ L  +++ N
Sbjct: 75  GIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLSQNTTLDKIQIKN 134

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           + I  +G ++LA+ +++N T   L L+ +  G  GA A+AK +E    L+ L +   +I 
Sbjct: 135 SGIGATGVSALAK-VIQNVTY--LDLSKSIIGTKGAKAIAKVIENCCKLKYLRIDHCNID 191

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G+R +   L S+   L  L +    I  +G   +A  +   KSL  + +  N+I ++G
Sbjct: 192 VFGVRDIAQAL-SKNTNLEELSVACAGIDDEGMCKLARSVGKHKSLQVLTITHNNISEKG 250

Query: 404 AEKIADALKQNRTI 417
              I +A  +++++
Sbjct: 251 KRAIIEACAESQSL 264



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           S + IN Y +  GD  A ++A  L  N ++  + + G  +   G ++IA  L  N+ + +
Sbjct: 16  SAIHINFYSS--GDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEALMVNTTVRA 73

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L +    +  +  +AL E+LK +  I  L L    IG SGA  +A  L  N T+  + ++
Sbjct: 74  LGIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLSQNTTLDKIQIK 133

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            +G+      G  G+S     I ++ + L  S  I   +GAK +A   KV+        L
Sbjct: 134 NSGI------GATGVSALAKVIQNVTY-LDLSKSIIGTKGAKAIA---KVIENCCKLKYL 183

Query: 568 AFNEIRDD--GAFAIAQALKAN---EDVAVTSLNLANNFLTKFGQS 608
             +    D  G   IAQAL  N   E+++V    + +  + K  +S
Sbjct: 184 RIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCKLARS 229


>gi|410962749|ref|XP_003987931.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C14orf166B
           homolog [Felis catus]
          Length = 586

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V  L+L+   + +EG  ++ ++L+ N  L
Sbjct: 202 NMEESYVNLNHHGLGPSGTKAIAIALVSNTSVVTLELADNCIMEEGTLSLVQMLQENYYL 261

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L ++NN +   G ++++E L  N S++ +L L+GN      A    +    N  ++ L
Sbjct: 262 QDLNISNNDLGLKGASTISEFLQRNTSSLLNLQLSGNNFKDESAELFCQAFSANYRIKTL 321

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D+G   L   L+   G L  LD+  N    +GA  +   ++   +L  ++L 
Sbjct: 322 DLSHNEFSDKGGEHLGQMLALNIG-LQSLDLSWNQFHTRGAVALCNGLRANVTLQKLDLS 380

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+EGA  + + L+ N ++  ID+  N+I ++G   I++ L+ N  +  L L  NP+
Sbjct: 381 MNGFGNEGATALGEVLRLNNSLVYIDVSSNDISNEGVIKISKGLEFNESLKVLKLFLNPV 440

Query: 456 GADGAKAL 463
             DGA  L
Sbjct: 441 SMDGATLL 448



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 37/300 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N S+  L L  N I +EG  +L+  L      L  L+I
Sbjct: 208 VNLNHHGLGPSGTKAIAIALVSNTSVVTLELADNCIMEEGTLSLVQMLQENY-YLQDLNI 266

Query: 367 GNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  KGA  ++E++ +N  SLL + L  N+  DE AE    A   N  I T+DL  N
Sbjct: 267 SNNDLGLKGASTISEFLQRNTSSLLNLQLSGNNFKDESAELFCQAFSANYRIKTLDLSHN 326

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               KG   + ++L  N  + SLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 327 EFSDKGGEHLGQMLALNIGLQSLDLSWNQFHTRGAVALCNGLRANVTLQKLDLSMNGFGN 386

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
            GA  + ++LR NN++  +D+ +N + +E V     GL F                    
Sbjct: 387 EGATALGEVLRLNNSLVYIDVSSNDISNEGVIKISKGLEF-------------------- 426

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
                         NE+L  + L  N +  DGA  +  ++K N    +  ++++N  +++
Sbjct: 427 --------------NESLKVLKLFLNPVSMDGATLLLLSIKRNPKSKMEEIDISNVLVSE 472



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 2/238 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL + L EN  ++ L+++ N  G  GA+ 
Sbjct: 219 GTKAIAIALVSNTSVVTLELADNCIMEEGTLSLVQMLQENYYLQDLNISNNDLGLKGAST 278

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +++ L+ N  SL  L L GN+  DE         S+   ++  LD+ +N  S KG  H+ 
Sbjct: 279 ISEFLQRNTSSLLNLQLSGNNFKDESAELFCQAFSANY-RIKTLDLSHNEFSDKGGEHLG 337

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N T+  +DL  N   ++GA+A+  VL+
Sbjct: 338 QMLALNIGLQSLDLSWNQFHTRGAVALCNGLRANVTLQKLDLSMNGFGNEGATALGEVLR 397

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            N+ +  +D++ N I  +G   +S+ L+F+ ++  LKL    +   GA  +   ++ N
Sbjct: 398 LNNSLVYIDVSSNDISNEGVIKISKGLEFNESLKVLKLFLNPVSMDGATLLLLSIKRN 455



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N +   +  A N I   G  +   +LQ N  L+ LN
Sbjct: 206 SYVNLNHHGLGPSGTKAIAIALVSNTSVVTLELADNCIMEEGTLSLVQMLQENYYLQDLN 265

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G +G   + + L  N + +  LQLS  + +DE A+   +    N  ++ L+L++
Sbjct: 266 ISNNDLGLKGASTISEFLQRNTSSLLNLQLSGNNFKDESAELFCQAFSANYRIKTLDLSH 325

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  ++SL L+ N     GA AL  GL  N +L++L L  N  G
Sbjct: 326 NEFSDKGGEHLGQMLALNIGLQSLDLSWNQFHTRGAVALCNGLRANVTLQKLDLSMNGFG 385

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  +D+ +N IS +G   +++ ++  +SL  + L++N +  +G
Sbjct: 386 NEGATALGEVL-RLNNSLVYIDVSSNDISNEGVIKISKGLEFNESLKVLKLFLNPVSMDG 444

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 445 ATLLLLSIKRN 455



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE-EVSFAANGITA 204
           +  E   +L +  +E      +++S  + G +G   ++E L  N ++   +  + N    
Sbjct: 243 IMEEGTLSLVQMLQENYYLQDLNISNNDLGLKGASTISEFLQRNTSSLLNLQLSGNNFKD 302

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              + F     +N  +KTL+LS N   D+G + L  +L  N G++ L LS       GA 
Sbjct: 303 ESAELFCQAFSANYRIKTLDLSHNEFSDKGGEHLGQMLALNIGLQSLDLSWNQFHTRGAV 362

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L+ L+L+ N     G T+L E L  N+++  + ++ N     G   ++K
Sbjct: 363 ALCNGLRANVTLQKLDLSMNGFGNEGATALGEVLRLNNSLVYIDVSSNDISNEGVIKISK 422

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLS-SRKGKLAVLDIGNNSISAK 374
           GLE N+SL+ L L  N +  +G   L+  +  + K K+  +DI N  +S +
Sbjct: 423 GLEFNESLKVLKLFLNPVSMDGATLLLLSIKRNPKSKMEEIDISNVLVSEQ 473


>gi|432926485|ref|XP_004080852.1| PREDICTED: leucine-rich repeat-containing protein 34-like [Oryzias
           latipes]
          Length = 405

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 182/359 (50%), Gaps = 23/359 (6%)

Query: 222 TLNLSGN------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNS 274
           TL+L GN       + DE V  L   L ++  V  L +S  ++ D GAK +A+ L+ ++S
Sbjct: 50  TLDLPGNGGRRAQRLEDEDVLVLSKCLQNDGRVTGLDVSYNNISDGGAKHLADALQLSSS 109

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+ L+L  N I   G   LA +L  NS++ SL L+GN  G  G  ++++ L+ N +L+ 
Sbjct: 110 ALKFLDLKFNNIQADGAEFLANSLKSNSSLLSLSLSGNRFGDRGGVSMSRMLQVNSTLQM 169

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIK-NCKSLL 390
           L L   ++ D  + AL + L +R   L  LDI      S   + A H ++ +  NC SLL
Sbjct: 170 LQLSDCNLADRSVAALGAAL-NRNTALQALDISRPLLFSRQEEWAVHFSQMLTVNC-SLL 227

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L    + D G E +A+ L +NR++  +DL  N +   GA  +A VLK +  +  +DL
Sbjct: 228 ELHLGRMGLTDSGMETLAEGLTRNRSLRYLDLRCNRVTRDGAHHLAEVLKQSKTLEIIDL 287

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQ--IGASGAEFVADMLRYNNTISILDLRA 508
           + N I  +GA  LSE +  HG  +  +L  C+  I   G   +A  +++N +++ + +  
Sbjct: 288 SSNRIEDEGAVHLSEAMATHG-CSLKELSVCRNCIRTEGLLSLAQAVKHNQSLTHIYVWG 346

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY-LQGAKCLAQSFKVVNEALTSID 566
           N L + VC        F   I S + +  ++    Y + G   LAQ F+ + + +  ID
Sbjct: 347 NRLDEPVC------QVFSELISSGRLLPEHTDVSPYQVDGRLFLAQVFQGLRKQICCID 399



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 150/310 (48%), Gaps = 9/310 (2%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEE-VSFAANGITAAGIKAFDGVLQSNIALKTL 223
           + +D+S  N  D G   LA++L  + +A + +    N I A G +     L+SN +L +L
Sbjct: 83  TGLDVSYNNISDGGAKHLADALQLSSSALKFLDLKFNNIQADGAEFLANSLKSNSSLLSL 142

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LSGN  GD G   +  +L  N+ ++ LQLS  +L D    A+   L  N+ L+ L+++ 
Sbjct: 143 SLSGNRFGDRGGVSMSRMLQVNSTLQMLQLSDCNLADRSVAALGAALNRNTALQALDISR 202

Query: 284 NMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            ++           ++ L  N ++  LHL        G   LA+GL  N+SLR L L  N
Sbjct: 203 PLLFSRQEEWAVHFSQMLTVNCSLLELHLGRMGLTDSGMETLAEGLTRNRSLRYLDLRCN 262

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN--CKSLLWINLYMND 398
            +  +G   L   L   K  L ++D+ +N I  +GA H++E +    C SL  +++  N 
Sbjct: 263 RVTRDGAHHLAEVLKQSK-TLEIIDLSSNRIEDEGAVHLSEAMATHGC-SLKELSVCRNC 320

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I  EG   +A A+K N+++T I + GN +        + ++    ++       +P   D
Sbjct: 321 IRTEGLLSLAQAVKHNQSLTHIYVWGNRLDEPVCQVFSELISSGRLLPE-HTDVSPYQVD 379

Query: 459 GAKALSEVLK 468
           G   L++V +
Sbjct: 380 GRLFLAQVFQ 389



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 3/258 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   +D+   N   +G  FLA SL  N +   +S + N     G  +   +LQ N  L+ 
Sbjct: 110 ALKFLDLKFNNIQADGAEFLANSLKSNSSLLSLSLSGNRFGDRGGVSMSRMLQVNSTLQM 169

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVL 279
           L LS   + D  V  L   L  N  ++ L +S   L   ++E A   +++L  N  L  L
Sbjct: 170 LQLSDCNLADRSVAALGAALNRNTALQALDISRPLLFSRQEEWAVHFSQMLTVNCSLLEL 229

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L    +  SG  +LAE L  N ++R L L  N     GA+ LA+ L+ +K+L  + L  
Sbjct: 230 HLGRMGLTDSGMETLAEGLTRNRSLRYLDLRCNRVTRDGAHHLAEVLKQSKTLEIIDLSS 289

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I DEG   L   +++    L  L +  N I  +G   +A+ +K+ +SL  I ++ N +
Sbjct: 290 NRIEDEGAVHLSEAMATHGCSLKELSVCRNCIRTEGLLSLAQAVKHNQSLTHIYVWGNRL 349

Query: 400 GDEGAEKIADALKQNRTI 417
            +   +  ++ +   R +
Sbjct: 350 DEPVCQVFSELISSGRLL 367



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 15/278 (5%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L+K L+ +  +  L +  N+I D G + L   L      L  LD+  N+I A GA  +A
Sbjct: 71  VLSKCLQNDGRVTGLDVSYNNISDGGAKHLADALQLSSSALKFLDLKFNNIQADGAEFLA 130

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             +K+  SLL ++L  N  GD G   ++  L+ N T+  + L   N+  +  +A+   L 
Sbjct: 131 NSLKSNSSLLSLSLSGNRFGDRGGVSMSRMLQVNSTLQMLQLSDCNLADRSVAALGAALN 190

Query: 441 DNSVITSLDLAYNPI----GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            N+ + +LD++  P+      + A   S++L  + ++  L LG   +  SG E +A+ L 
Sbjct: 191 RNTALQALDIS-RPLLFSRQEEWAVHFSQMLTVNCSLLELHLGRMGLTDSGMETLAEGLT 249

Query: 497 YNNTISILDLRANGL-RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQ 553
            N ++  LDLR N + RD       G       +   K +    L  N +  +GA  L++
Sbjct: 250 RNRSLRYLDLRCNRVTRD-------GAHHLAEVLKQSKTLEIIDLSSNRIEDEGAVHLSE 302

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
           +      +L  + +  N IR +G  ++AQA+K N+ + 
Sbjct: 303 AMATHGCSLKELSVCRNCIRTEGLLSLAQAVKHNQSLT 340


>gi|91205254|ref|YP_537609.1| hypothetical protein RBE_0439 [Rickettsia bellii RML369-C]
 gi|239947374|ref|ZP_04699127.1| leucine Rich Repeat domain protein [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|383482251|ref|YP_005391165.1| hypothetical protein MCI_00705 [Rickettsia montanensis str. OSU
           85-930]
 gi|91068798|gb|ABE04520.1| Leucine-rich repeat protein [Rickettsia bellii RML369-C]
 gi|239921650|gb|EER21674.1| leucine Rich Repeat domain protein [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|378934605|gb|AFC73106.1| hypothetical protein MCI_00705 [Rickettsia montanensis str. OSU
           85-930]
          Length = 594

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 178/373 (47%), Gaps = 41/373 (10%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S  N G+  +  LA++L   Q    +  + N I   G+K    +L+ +  + TLNL  N
Sbjct: 16  LSLSNIGEGDVKSLAQALKGTQITR-LDLSNNNIGCNGLKYLTQILR-DTQITTLNLKNN 73

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV---------- 278
            I DEGVK L + L +   +  L LS   +  + A+ + ++L N  +  +          
Sbjct: 74  NIMDEGVKYLTESLKE-IQITELDLSENKIGSDAAQYLNKMLSNTKMRSLYLDIHYTEDG 132

Query: 279 ------------------LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
                             + ++NN I   G   L +   +N  I  L L+     A  A 
Sbjct: 133 DVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTF-QNIAIAELTLDSQNLEADDAQ 191

Query: 321 ALAKGLEGNKSLRELHLHGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            LA+  +  K + EL +  N I    GI+ L+     +  ++A L++    I   G  ++
Sbjct: 192 YLAQAFKDTK-ISELKMSYNHIMQLNGIQYLVQAF--KDSQIAKLNVHAEKIRTTGVKYL 248

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE++K  K +L ++L +N IGDEG + +A ALK N  I  IDL  ++I ++GA  +A +L
Sbjct: 249 AEFLKEVK-VLDLDLRLNYIGDEGMKYLAPALK-NSDIMYIDLAWDDIEAEGARYLAEIL 306

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           + NS I  +DL  N IGADGA+ L++ L +   +  + L    I  +G +++ D++  N 
Sbjct: 307 Q-NSKILFIDLCNNSIGADGARYLADGLPY-SQVTGIHLHGNMIEYAGYQYLIDVVD-NT 363

Query: 500 TISILDLRANGLR 512
            IS ++L  N + 
Sbjct: 364 NISWVNLHCNNIE 376



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 37/320 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++   N  DEG+ +L ESL   Q   E+  + N I +   +  + +L SN  +++L
Sbjct: 65  ITTLNLKNNNIMDEGVKYLTESLKEIQIT-ELDLSENKIGSDAAQYLNKML-SNTKMRSL 122

Query: 224 NLSGNPIGDEGV------KCLCDI----------------------LVDNAGVERLQLSS 255
            L  +   D  V      +  CDI                         N  +  L L S
Sbjct: 123 YLDIHYTEDGDVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTFQNIAIAELTLDS 182

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            +L  + A+ +A+  K+  I  +    N+++  +G   L +A  ++S I  L+++     
Sbjct: 183 QNLEADDAQYLAQAFKDTKISELKMSYNHIMQLNGIQYLVQA-FKDSQIAKLNVHAEKIR 241

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G   LA+ L+  K L +L L  N IGDEG++ L   L  +   +  +D+  + I A+G
Sbjct: 242 TTGVKYLAEFLKEVKVL-DLDLRLNYIGDEGMKYLAPAL--KNSDIMYIDLAWDDIEAEG 298

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A ++AE ++N K +L+I+L  N IG +GA  +AD L  ++ +T I L GN I   G   +
Sbjct: 299 ARYLAEILQNSK-ILFIDLCNNSIGADGARYLADGLPYSQ-VTGIHLHGNMIEYAGYQYL 356

Query: 436 ARVLKDNSVITSLDLAYNPI 455
             V+ DN+ I+ ++L  N I
Sbjct: 357 IDVV-DNTNISWVNLHCNNI 375



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 182/390 (46%), Gaps = 42/390 (10%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K + D L DN     L LS++   D   K++A+ LK   I R L+L+NN I  +G   L 
Sbjct: 4   KTMIDNLKDNHS---LSLSNIGEGD--VKSLAQALKGTQITR-LDLSNNNIGCNGLKYLT 57

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           + +L ++ I +L+L  N     G   L + L+    + EL L  N IG +  + L   LS
Sbjct: 58  Q-ILRDTQITTLNLKNNNIMDEGVKYLTESLK-EIQITELDLSENKIGSDAAQYLNKMLS 115

Query: 356 SRKGKLAVLDIG-------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           + K +   LDI        N  IS +        IKN    + I ++ N IG +GA+ + 
Sbjct: 116 NTKMRSLYLDIHYTEDGDVNKYISQRSYCD----IKN----IHITIHNNKIGIKGAQYLN 167

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI-GADGAKALSEVL 467
               QN  I  + L   N+ +  A  +A+  KD + I+ L ++YN I   +G + L +  
Sbjct: 168 KTF-QNIAIAELTLDSQNLEADDAQYLAQAFKD-TKISELKMSYNHIMQLNGIQYLVQAF 225

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
           K    I  L +   +I  +G +++A+ L+    +  LDLR N + DE      G+ +   
Sbjct: 226 K-DSQIAKLNVHAEKIRTTGVKYLAEFLKEVKVLD-LDLRLNYIGDE------GMKYLAP 277

Query: 528 AIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           A+ +   +++  L  + ++  GA+ LA+  +  N  +  IDL  N I  DGA  +A  L 
Sbjct: 278 ALKN-SDIMYIDLAWDDIEAEGARYLAEILQ--NSKILFIDLCNNSIGADGARYLADGLP 334

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
            ++   VT ++L  N +   G   L D  D
Sbjct: 335 YSQ---VTGIHLHGNMIEYAGYQYLIDVVD 361


>gi|301785165|ref|XP_002928006.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like
            [Ailuropoda melanoleuca]
          Length = 1059

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 150/333 (45%), Gaps = 18/333 (5%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL------V 243
            QT    S   + +  A  K     L +N  L  L L  N +G  GV+ LC  L      +
Sbjct: 683  QTLPAPSPEKHLLPEAYSKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKL 742

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
             N  ++R  + S   +D  A  +A    N S+ RV +L+ N +   G   L E L     
Sbjct: 743  QNLSLKRCCVPSSACQDLAAALVA----NRSLTRV-DLSCNGLGLPGVRLLCEGLQHPGC 797

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++++ L      A     +A  L  N+ L EL L GN + D G+R L  GL     +L 
Sbjct: 798  RLQAIQLRKCQLEAGACREIASVLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQ 857

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTID 421
            +L +    ++A     +A  +   +SL+ ++L +ND+GD GA  + + L+  + ++ T+ 
Sbjct: 858  ILWLKICHLTAAACEELASTLAVNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVR 917

Query: 422  LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW- 480
            LG   + S     I  VL+ N  +  LDL++N +G  G   L E L+ H      KL W 
Sbjct: 918  LGICRLSSATCEGICTVLRVNPHLRELDLSFNDLGDTGMWPLCEGLR-HPTCRLQKL-WL 975

Query: 481  --CQIGASGAEFVADMLRYNNTISILDLRANGL 511
              C + A   E ++  L  + T++ L L  N L
Sbjct: 976  DSCGLTAKACEDLSSALGVSQTLTELYLTNNAL 1008



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 10/271 (3%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  N +L EL L+ N++G  G+R L  GL     KL  L +    + +     
Sbjct: 700 SKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKLQNLSLKRCCVPSSACQD 759

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   +SL  ++L  N +G  G   + + L+     +  I L    + +     IA 
Sbjct: 760 LAAALVANRSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIAS 819

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
           VL  N  +  LDL  N +   G + L + L+  G  +  L L  C + A+  E +A  L 
Sbjct: 820 VLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLA 879

Query: 497 YNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF 555
            N ++  LDL  N L D      C GL     ++ +++      L I  L  A C     
Sbjct: 880 VNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVR------LGICRLSSATCEGICT 933

Query: 556 KV-VNEALTSIDLAFNEIRDDGAFAIAQALK 585
            + VN  L  +DL+FN++ D G + + + L+
Sbjct: 934 VLRVNPHLRELDLSFNDLGDTGMWPLCEGLR 964



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 3/206 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
            R    +D++G    D GL  L + L +     ++ +     +TAA  +     L  N +L
Sbjct: 825  RHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLAVNRSL 884

Query: 221  KTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+LS N +GD G   LC+ L      ++ ++L    L     + I  +L+ N  LR L
Sbjct: 885  MELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNPHLREL 944

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L+ N +  +G   L E L   +  ++ L L+     A     L+  L  +++L EL+L 
Sbjct: 945  DLSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQTLTELYLT 1004

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVL 364
             N++G+ G+R L  GLS    KL VL
Sbjct: 1005 NNALGNAGVRLLCKGLSHPGCKLQVL 1030



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 7/255 (2%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R+ + VD+S    G  G+  L E L +     + +      + A   +    VL +N  L
Sbjct: 768  RSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIASVLSTNRHL 827

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL---LKNNSILR 277
              L+L+GN + D G++ LC  L  + G  RLQ+  + +    A A  EL   L  N  L 
Sbjct: 828  VELDLTGNVLEDLGLRLLCQGL-RHPGC-RLQILWLKICHLTAAACEELASTLAVNRSLM 885

Query: 278  VLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L+ N +   G   L E L     +++++ L      +     +   L  N  LREL 
Sbjct: 886  ELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNPHLRELD 945

Query: 337  LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
            L  N +GD G+  L  GL     +L  L + +  ++AK    ++  +   ++L  + L  
Sbjct: 946  LSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQTLTELYLTN 1005

Query: 397  NDIGDEGAEKIADAL 411
            N +G+ G   +   L
Sbjct: 1006 NALGNAGVRLLCKGL 1020


>gi|399497968|emb|CCG20312.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A S K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|157817121|ref|NP_001101676.1| T-complex-associated testis-expressed protein 1 [Rattus norvegicus]
 gi|149069293|gb|EDM18734.1| t-complex-associated testis expressed 1 (predicted) [Rattus
           norvegicus]
          Length = 498

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 3/220 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 255 EWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSH 314

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 315 NLIGDRGARAAAKLLS--HSRLRVLNLANNQLRASGAQSLAHALAHNTNLVSLNLRLNCI 372

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + IA AL+ N+ +T ++LGGN +    A+ +++VL  N+ + SL+L+ N IG DG
Sbjct: 373 EDEGGQAIAHALETNKCLTVLNLGGNELSEPTATLLSQVLPVNTTLISLNLSCNHIGQDG 432

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            K L E +  +  I    L    + A  +E++   + +NN
Sbjct: 433 GKQLLEGMSDNKTILEFDLRLSDV-AQESEYLIGQVLHNN 471



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 270 AATIKACH-------TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 322

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +  SG  SLA AL  N+ + SL+L  N     G  A+A
Sbjct: 323 RAAAKLL-SHSRLRVLNLANNQLRASGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIA 381

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             LE NK L  L+L GN +  E    L+S +      L  L++  N I   G   + E +
Sbjct: 382 HALETNKCLTVLNLGGNELS-EPTATLLSQVLPVNTTLISLNLSCNHIGQDGGKQLLEGM 440

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K++L  +L ++D+  E    I   L  NR
Sbjct: 441 SDNKTILEFDLRLSDVAQESEYLIGQVLHNNR 472



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA  
Sbjct: 266 CHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPA-LEELDLSHNLIGDRGARA 324

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  AIA  
Sbjct: 325 AAKLLSHSR-LRVLNLANNQLRASGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIAHA 383

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T L+L  N +    A  LS+VL  +  + +L L    IG  G + + + +  N
Sbjct: 384 LETNKCLTVLNLGGNELSEPTATLLSQVLPVNTTLISLNLSCNHIGQDGGKQLLEGMSDN 443

Query: 499 NTISILDLRANGLRDE 514
            TI   DLR + +  E
Sbjct: 444 KTILEFDLRLSDVAQE 459



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 254 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 313

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 314 HNLIGDRGARAAAKLL-SHSRLRVLNLANNQLRASGAQSLAHALAHNTNLVSLNLRLNCI 372

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +AIA  L+ N  L VL L  N +     T L++ L  N+T+ SL+L+ N+ G  G
Sbjct: 373 EDEGGQAIAHALETNKCLTVLNLGGNELSEPTATLLSQVLPVNTTLISLNLSCNHIGQDG 432

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK++ E  L  + +  E
Sbjct: 433 GKQLLEGMSDNKTILEFDLRLSDVAQE 459



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 45/98 (45%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DEG   +A +L  N+    ++   N ++         VL  N  L +LNLS N IG +G 
Sbjct: 374 DEGGQAIAHALETNKCLTVLNLGGNELSEPTATLLSQVLPVNTTLISLNLSCNHIGQDGG 433

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           K L + + DN  +    L   D+  E    I ++L NN
Sbjct: 434 KQLLEGMSDNKTILEFDLRLSDVAQESEYLIGQVLHNN 471


>gi|194038603|ref|XP_001925999.1| PREDICTED: uncharacterized protein C14orf166B homolog [Sus scrofa]
          Length = 486

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 137/262 (52%), Gaps = 2/262 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V+++    G  G   +A +L  N T   +  A N I   GI +   +LQ N  L+ +N+S
Sbjct: 93  VNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYLQEMNIS 152

Query: 227 GNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +G EG + L + L +N + +  L+LS  + ++E A+   + L  N  +R L+L++N 
Sbjct: 153 NNNLGLEGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHNQ 212

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +       L + L  NS ++SL L+ N+    GA AL  GL  N +L++L L  NS G+E
Sbjct: 213 LSDKAGEYLGQMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNE 272

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L      LA LD+  N IS +G   +++ ++  +SL  + L++N I  +GA 
Sbjct: 273 GASALGEVL-RLNSSLAYLDVSCNDISNEGITKLSKGLEVNESLKVLKLFLNPISMDGAL 331

Query: 406 KIADALKQNRTITTIDLGGNNI 427
            +  ++K+N      D+  +N+
Sbjct: 332 LLILSIKRNPKSKMEDIDISNV 353



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 41/320 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I +EGI +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN++  +GA  ++E+++N   SL  + L  N+  +E AE    AL  N  I T+DL  N
Sbjct: 152 SNNNLGLEGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            +  K    + ++L  NS + SLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 212 QLSDKAGEYLGQMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + ++LR N++++ LD+  N + +E                               
Sbjct: 272 EGASALGEVLRLNSSLAYLDVSCNDISNE------------------------------- 300

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANN 600
            G   L++  + VNE+L  + L  N I  DGA  +  ++K N     ED+ ++++ ++  
Sbjct: 301 -GITKLSKGLE-VNESLKVLKLFLNPISMDGALLLILSIKRNPKSKMEDIDISNVLVSEQ 358

Query: 601 FLTKFGQ-SALTDAKDLVYE 619
           F+       A+    D++Y+
Sbjct: 359 FVKTLDSVCAIHPQLDVLYK 378



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 13/288 (4%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N  G  GA  
Sbjct: 104 GTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYLQEMNISNNNLGLEGARI 163

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           L++ L+ N  SL  L L GN+  +E        LS    ++  LD+ +N +S K   ++ 
Sbjct: 164 LSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNY-RIRTLDLSHNQLSDKAGEYLG 222

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N  +  +DL  N+  ++GASA+  VL+
Sbjct: 223 QMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNEGASALGEVLR 282

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            NS +  LD++ N I  +G   LS+ L+ + ++  LKL    I   GA  +   ++ N  
Sbjct: 283 LNSSLAYLDVSCNDISNEGITKLSKGLEVNESLKVLKLFLNPISMDGALLLILSIKRNPK 342

Query: 501 ISILDLRANGL---------RDEVCSGCNGLSFFHSAI--YSLKHMLF 537
             + D+  + +          D VC+    L   + A+   S+K  LF
Sbjct: 343 SKMEDIDISNVLVSEQFVKTLDSVCAIHPQLDVLYKAVQGLSIKKTLF 390



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN  + TL L+ N I +EG+  L ++L +N  +
Sbjct: 87  NMEEPYVNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+ +L  EGA+ ++E L+NN S L  L L+ N           +AL  N  IR+L
Sbjct: 147 QEMNISNNNLGLEGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N         L + L  N  L+ L L  N     G  AL +GL      L  LD+ 
Sbjct: 207 DLSHNQLSDKAGEYLGQMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVA-LKKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NS   +GA  + E ++   SL ++++  NDI +EG  K++  L+ N ++  + L  N I
Sbjct: 266 MNSFGNEGASALGEVLRLNSSLAYLDVSCNDISNEGITKLSKGLEVNESLKVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  +D++   +     K L  V   H  ++ L
Sbjct: 326 SMDGALLLILSIKRNPKSKMEDIDISNVLVSEQFVKTLDSVCAIHPQLDVL 376



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 121/237 (51%), Gaps = 10/237 (4%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N T+ T++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEEP-YVNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ LSE L+ +  ++ +L+L         AE    
Sbjct: 136 LVEMLQENYYLQEMNISNNNLGLEGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  I  LDL  N L D+       +   +S + SL  + +   CI+   GA  L  
Sbjct: 196 ALSVNYRIRTLDLSHNQLSDKAGEYLGQMLALNSGLQSL-DLSWNHFCIH---GAVALCN 251

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA---VTSLNLANNFLTKFGQ 607
             + VN AL  +DL+ N   ++GA A+ + L+ N  +A   V+  +++N  +TK  +
Sbjct: 252 GLR-VNVALKKLDLSMNSFGNEGASALGEVLRLNSSLAYLDVSCNDISNEGITKLSK 307



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 30/228 (13%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + L+EF +    +  S+ +SG NF +E      ++L  N     +  + N ++    
Sbjct: 159 EGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHNQLSDKAG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N  L++L+LS N     G   LC+ L  N  +++L LS     +EGA A+ 
Sbjct: 219 EYLGQMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNEGASALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+L+ NS L  L+++ N I   G T                             L+KGLE
Sbjct: 279 EVLRLNSSLAYLDVSCNDISNEGITK----------------------------LSKGLE 310

Query: 328 GNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
            N+SL+ L L  N I  +G +  ++S   + K K+  +DI N  +S +
Sbjct: 311 VNESLKVLKLFLNPISMDGALLLILSIKRNPKSKMEDIDISNVLVSEQ 358


>gi|399497834|emb|CCG20245.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N   DEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHIHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N    +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A S K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +  + +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGH--IHLIEVDMSSNALRRAGARVL 459



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
            DEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 ADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           +A  +     +  L L  N     GA  +AK LEG+  L E                   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSSNALRRAGARVLAQT 462

Query: 335 ---------LHLHGNSIGDEGIRAL 350
                    L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|26349853|dbj|BAC38566.1| unnamed protein product [Mus musculus]
          Length = 706

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 1/213 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K + E L    I+  L L NN I   G   +A+ L E   ++ L L 
Sbjct: 486 IRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLG 545

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   +A  ++ + S+ ++ + GN IGDEG +A    L      L  L +  N 
Sbjct: 546 KNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPS-LTTLSLAFNG 604

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS +G   +A+ +K   +L  I L  N++ DE AE  A+ L+ N+T+  + L  N I +K
Sbjct: 605 ISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRITAK 664

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           G + +AR L+ N+ IT + L  N I  + AK  
Sbjct: 665 GTAQLARALQKNTAITEICLNGNLIKPEEAKVF 697



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 1/175 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  +  L + NN I+  GA +VA+ +  C+ L  + L
Sbjct: 486 IRLSVNQITDTGVKVLCEELTKYK-IVTFLGLYNNQITDIGARYVAQILDECRGLKHLKL 544

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K + +I  + + GN I  +GA A A  LKD+  +T+L LA+N 
Sbjct: 545 GKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNG 604

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           I  +G K+L++ LK +  +  + L   ++    AE  A+MLR N T+  L L  N
Sbjct: 605 ISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQN 659



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 112/213 (52%), Gaps = 1/213 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  + L+ N     G   L + L   K +  L L+ N I D G R +   L   +G L
Sbjct: 481 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRG-L 539

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G   VA  +KN  S++ + ++ N IGDEGA+  A+ALK + ++TT+ 
Sbjct: 540 KHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLS 599

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I  +G  ++A+ LK N+ +T + L  N +  + A+  +E+L+ +  +  L L   
Sbjct: 600 LAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQN 659

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +I A G   +A  L+ N  I+ + L  N ++ E
Sbjct: 660 RITAKGTAQLARALQKNTAITEICLNGNLIKPE 692



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 39/257 (15%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 472 GVQELQPCFS----RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAR 527

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +  + LG N I S+G   +A  +K+++ I  + +  N IG +GAKA +E
Sbjct: 528 YVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAE 587

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            LK H ++ TL L +  I   G + +A  L+ N T++++ L  N L DE           
Sbjct: 588 ALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDE----------- 636

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+C A+  + VN+ L  + L  N I   G   +A+AL+
Sbjct: 637 ---------------------SAECFAEMLR-VNQTLRHLWLIQNRITAKGTAQLARALQ 674

Query: 586 ANEDVAVTSLNLANNFL 602
            N   A+T + L  N +
Sbjct: 675 KN--TAITEICLNGNLI 689



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 87/170 (51%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A+ L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 523 DIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGA 582

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L D+  +  L L+   +  EG K++A+ LK N+ L V+ L  N ++       A
Sbjct: 583 KAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFA 642

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T+R L L  N   A G   LA+ L+ N ++ E+ L+GN I  E
Sbjct: 643 EMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPE 692



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 86/192 (44%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L E L   +    +    N IT  G +    +L     LK L
Sbjct: 483 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHL 542

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KC+   + ++  +  + +    + DEGAKA AE LK++  L  L L  
Sbjct: 543 KLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAF 602

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  SLA+AL +N+T+  + L  N      A   A+ L  N++LR L L  N I 
Sbjct: 603 NGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRIT 662

Query: 344 DEGIRALMSGLS 355
            +G   L   L 
Sbjct: 663 AKGTAQLARALQ 674



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 74/153 (48%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E R    + +       EG   +A ++  + +  +V    N I   G KAF   L+ + +
Sbjct: 535 ECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPS 594

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +  + L+  +L DE A+  AE+L+ N  LR L
Sbjct: 595 LTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHL 654

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA AL +N+ I  + LNGN
Sbjct: 655 WLIQNRITAKGTAQLARALQKNTAITEICLNGN 687



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K L E L  +  +  L L   QI   GA +VA +L       
Sbjct: 481 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQIL------- 533

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KC+A + K  + ++
Sbjct: 534 ----------DE-CRGLKHLKLGKNRITS--------------EGGKCVALAVKN-STSI 567

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             + +  N+I D+GA A A+ALK  +  ++T+L+LA N ++  G  +L  A
Sbjct: 568 VDVGMWGNQIGDEGAKAFAEALK--DHPSLTTLSLAFNGISPEGGKSLAQA 616


>gi|123477306|ref|XP_001321821.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121904655|gb|EAY09598.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 686

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 194/455 (42%), Gaps = 57/455 (12%)

Query: 174 FGDEGL--FFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           F +E L   F+A+S  +N +  +  F    I     K F         LK  ++S + IG
Sbjct: 33  FSEEELKSIFIAKSQDFNISTSDKMFQRFYINQMK-KPF---------LKIFDMSSSSIG 82

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            +  + +C +++++  +  + LS   + ++GA +IA+ L   + +  L+L++N I   G 
Sbjct: 83  PKATEVICSLILNHPHIRSINLSGNSIGNKGATSIAQFLLQTTKIISLDLSSNAILDKGL 142

Query: 292 TSLAEALLENSTIRSLHLNG------NYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            ++  AL  N ++ SL +        N  G   A  LA  L  N+ L EL L    I  +
Sbjct: 143 YAIFYALKSNPSVISLKIGSTSSVARNSVGQSAAKELASTLSMNQVLSELDLSMAKITCD 202

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            +  +  GL      L VL+I NN+I +KG   V + I N  +++ +N+  N I D+ A 
Sbjct: 203 LMIHISKGLELNHS-LQVLNISNNNICSKGCRKVLQAILNS-NIVDLNISNNAIKDDIAP 260

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
                + +N++I  +++  N +      AI     + S +   +L++NP+   G      
Sbjct: 261 DFIKYISKNKSIKRLNISNNQLTKAFTKAITPAFANYSELIEFNLSHNPLTGAGIDEFGP 320

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L  +  I TL +  CQI  +G +     L  N +++ L L  N + DE           
Sbjct: 321 ALAMNLKIKTLNISMCQIDNNGFKSFCKKLAENYSLTTLILSHNPIGDE----------- 369

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                GAK  A+  K  +  L  IDL   EI D G   +  AL 
Sbjct: 370 ---------------------GAKNFAEVIK-EHPILKEIDLEMTEITDVGGDVLIPALG 407

Query: 586 ANEDVAVTSLNLANNFL--TKFGQSALTDAKDLVY 618
           A++  ++  ++  NN L   K    AL D   L Y
Sbjct: 408 ASK--SIEKVSFRNNLLGNPKVISKALMDNTLLYY 440



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 14/295 (4%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA +L  NQ   E+  +   IT   +      L+ N +L+ LN+S N I  +G + +   
Sbjct: 179 LASTLSMNQVLSELDLSMAKITCDLMIHISKGLELNHSLQVLNISNNNICSKGCRKVLQA 238

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           ++ N+ +  L +S+  ++D+ A    + +  N  ++ L ++NN +  +   ++  A    
Sbjct: 239 IL-NSNIVDLNISNNAIKDDIAPDFIKYISKNKSIKRLNISNNQLTKAFTKAITPAFANY 297

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +   +L+ N     G +     L  N  ++ L++    I + G ++    L+     L
Sbjct: 298 SELIEFNLSHNPLTGAGIDEFGPALAMNLKIKTLNISMCQIDNNGFKSFCKKLAENYS-L 356

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L + +N I  +GA + AE IK    L  I+L M +I D G + +  AL  +++I  + 
Sbjct: 357 TTLILSHNPIGDEGAKNFAEVIKEHPILKEIDLEMTEITDVGGDVLIPALGASKSIEKVS 416

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              N +       I++ L DN+++   D+ YN I            K+H +I  L
Sbjct: 417 FRNNLLG--NPKVISKALMDNTLLYYFDIDYNDIE----------YKYHADIEKL 459



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 7/206 (3%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           +  N++ + ++ + N +T A  KA      +   L   NLS NP+   G+      L  N
Sbjct: 266 ISKNKSIKRLNISNNQLTKAFTKAITPAFANYSELIEFNLSHNPLTGAGIDEFGPALAMN 325

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             ++ L +S   + + G K+  + L  N  L  L L++N I   G  + AE + E+  ++
Sbjct: 326 LKIKTLNISMCQIDNNGFKSFCKKLAENYSLTTLILSHNPIGDEGAKNFAEVIKEHPILK 385

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI--RALMSGLSSRKGKLAV 363
            + L       +G + L   L  +KS+ ++    N +G+  +  +ALM         L  
Sbjct: 386 EIDLEMTEITDVGGDVLIPALGASKSIEKVSFRNNLLGNPKVISKALMDN-----TLLYY 440

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSL 389
            DI  N I  K    + + IK+ + L
Sbjct: 441 FDIDYNDIEYKYHADIEKLIKSNQKL 466



 Score = 46.2 bits (108), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 36/195 (18%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G+     +L  N   + ++ +   I   G K+F   L  N +L TL LS NPIGDEG K 
Sbjct: 314 GIDEFGPALAMNLKIKTLNISMCQIDNNGFKSFCKKLAENYSLTTLILSHNPIGDEGAKN 373

Query: 238 LCDILVDNAGVERLQLSSVDLRDEG--------------------------AKAIAELLK 271
             +++ ++  ++ + L   ++ D G                           K I++ L 
Sbjct: 374 FAEVIKEHPILKEIDLEMTEITDVGGDVLIPALGASKSIEKVSFRNNLLGNPKVISKALM 433

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N++L   +++ N I+Y     + + +  N  +R              N + + ++  K 
Sbjct: 434 DNTLLYYFDIDYNDIEYKYHADIEKLIKSNQKLRK---------ERKENKIKREVQSTKD 484

Query: 332 LR-ELHLHGNSIGDE 345
           +   LHL    I +E
Sbjct: 485 VDARLHLTRQEISEE 499


>gi|410983571|ref|XP_003998112.1| PREDICTED: protein NLRC5 [Felis catus]
          Length = 1868

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 151/335 (45%), Gaps = 7/335 (2%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
            EGL  L   L +    EE+  + N     G +   GVL+    LK L+LS  P+G   + 
Sbjct: 1511 EGLAHLTSGLSHCLHLEELDLSNNQFGEEGTRVLMGVLEGKCWLKRLDLSHLPLGGSILA 1570

Query: 237  CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
             L   L     ++ L+LS   + D G   ++E L+  + L  L+L++N I  +G   LA 
Sbjct: 1571 VLTQRLRHMTLLQSLRLSRNGVCDVGCHLLSEALRAATSLEELDLSHNQIGDTGAQLLAV 1630

Query: 297  ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
             L     +R + L+GN  G  G   LA+ L   + L +L L  N++GD     L  GL  
Sbjct: 1631 VLPWLPELRKIDLSGNGIGPAGGARLAESLALCRHLEQLMLGCNALGDATALGLAQGLPR 1690

Query: 357  RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
                L +L + ++ +  +GA  +++ +  C  +  ++L  N +   G  +    L   R 
Sbjct: 1691 H---LRILHLPSSRLGPEGALSLSQALDGCPYVEEVSLAENSLA-RGIPQFCQGLPLLR- 1745

Query: 417  ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
               IDL   +I    A  +A  L     +  + L++N +G + A  L+ VL   G +  +
Sbjct: 1746 --RIDLVSCDIDDHTAKPLAASLLLCPALEEILLSWNVLGDEAAAELARVLPQMGRLKRM 1803

Query: 477  KLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             L   +I A GA  +A+ L   + I ++ L  N +
Sbjct: 1804 DLEKNRITACGAWLLAEGLAQGSGIQVIRLWNNPI 1838



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 136/300 (45%), Gaps = 9/300 (3%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+S    G   L  L + L +    + +  + NG+   G       L++  +L+ L+LS
Sbjct: 1557 LDLSHLPLGGSILAVLTQRLRHMTLLQSLRLSRNGVCDVGCHLLSEALRAATSLEELDLS 1616

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD G + L  +L     + ++ LS   +   G   +AE L     L  L L  N +
Sbjct: 1617 HNQIGDTGAQLLAVVLPWLPELRKIDLSGNGIGPAGGARLAESLALCRHLEQLMLGCNAL 1676

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              +    LA+ L  +  +R LHL  +  G  GA +L++ L+G   + E+ L  NS+   G
Sbjct: 1677 GDATALGLAQGLPRH--LRILHLPSSRLGPEGALSLSQALDGCPYVEEVSLAENSLA-RG 1733

Query: 347  IRALMSGLSS-RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            I     GL   R+  L   DI +++     A  +A  +  C +L  I L  N +GDE A 
Sbjct: 1734 IPQFCQGLPLLRRIDLVSCDIDDHT-----AKPLAASLLLCPALEEILLSWNVLGDEAAA 1788

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            ++A  L Q   +  +DL  N I + GA  +A  L   S I  + L  NPI  D  + L +
Sbjct: 1789 ELARVLPQMGRLKRMDLEKNRITACGAWLLAEGLAQGSGIQVIRLWNNPIPPDTVQRLQK 1848



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 9/236 (3%)

Query: 369  NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
            + + ++G  H+   + +C  L  ++L  N  G+EG   +   L+    +  +DL    + 
Sbjct: 1506 SCVRSEGLAHLTSGLSHCLHLEELDLSNNQFGEEGTRVLMGVLEGKCWLKRLDLSHLPLG 1565

Query: 429  SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
                + + + L+  +++ SL L+ N +   G   LSE L+   ++  L L   QIG +GA
Sbjct: 1566 GSILAVLTQRLRHMTLLQSLRLSRNGVCDVGCHLLSEALRAATSLEELDLSHNQIGDTGA 1625

Query: 489  EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGA 548
            + +A +L +   +  +DL  NG+      G  G +    ++   +H+    L  N L  A
Sbjct: 1626 QLLAVVLPWLPELRKIDLSGNGI------GPAGGARLAESLALCRHLEQLMLGCNALGDA 1679

Query: 549  KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
              L  + + +   L  + L  + +  +GA +++QAL       V  ++LA N L +
Sbjct: 1680 TALGLA-QGLPRHLRILHLPSSRLGPEGALSLSQALDGCP--YVEEVSLAENSLAR 1732



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 135/340 (39%), Gaps = 41/340 (12%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            +   + ++G      G+  L ++L      EEVSF  N +    +     VL     L+ 
Sbjct: 723  SLKKLGLAGSKITARGIGRLVQALPLCPQLEEVSFQDNQLKDGVLLNIVEVLLCLPRLQK 782

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVL 279
            L+LS N +    + CL  + + +  V  LQ+   DL        +  AEL   +      
Sbjct: 783  LDLSRNSVSMSTLLCLTKVAITSPAVRMLQVREADLIFLLSPPTETAAELQGAS------ 836

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L  N        S + AL L+   +R +H             L   L+    L ++ L 
Sbjct: 837  DLQGNASQRKEAQSRSLALRLQQCQLR-VH---------DVQELIAQLQEGPHLDKVDLS 886

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYM 396
            GN + +EG R LM+  +++      LD+ +N +S  G   V   +  C++L  L I+L  
Sbjct: 887  GNQLDNEGCR-LMAEAAAQLDITRNLDLSDNGLSVDGVDGVLSAVSMCQTLAELHISLLH 945

Query: 397  NDI------------GDEGAEKIADALKQNRTI------TTIDLGGNNIHSKGASAIARV 438
              +            G +    + D L +          T I L    + +K  + + R 
Sbjct: 946  KTVVLTFAPKQEEQGGIQERAALHDGLMRQMPCELPPHSTRIRLTHCGLQAKHLAQLCRA 1005

Query: 439  LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            L  +  ++ LD + N +G +G   L+++L   G + +L L
Sbjct: 1006 LGGSCRLSHLDFSGNALGDEGVAQLAQLLPGLGTLQSLNL 1045



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 163/419 (38%), Gaps = 63/419 (15%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            L  L+LS N +GD+G++CL + L        L LS   +  EGA  + + L   S  RV 
Sbjct: 1251 LNQLDLSANLLGDDGLQCLLECLPQLPISASLDLSHNSISVEGALCLVKTLP--SCPRVR 1308

Query: 280  ELNNNM-------IDYSGFTSLAEAL-LENSTIRSLHLNGNYGG---ALGANAL-----A 323
            E + N+       I +S      + L L   + R  H+     G   AL   AL      
Sbjct: 1309 EASVNLGSEQSFWIHFSRQEEAGKTLRLSQCSFRPEHVPRLATGLNQALKPTALTLTQCC 1368

Query: 324  KGLE----------GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN----- 368
             GLE              L  L +    +G  G+ AL+   +   G +  + I       
Sbjct: 1369 LGLEQLTVLLSLVRWPVGLFNLRVEEPWVGKAGVLALLEVCTQASGNITEISIAEAQQQL 1428

Query: 369  ------------NSISAK------GAFH---VAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
                         +++ +      G  H   V + ++ C  L  ++L   ++ D  +  +
Sbjct: 1429 CLQLEFPRQENPEAVALRLAHCDLGTHHSLLVWQLMETCARLRQLSLSQVNLCDTSSLLL 1488

Query: 408  ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
               L     + T  L  + + S+G + +   L     +  LDL+ N  G +G + L  VL
Sbjct: 1489 QSLLPSLSELKTFRLTCSCVRSEGLAHLTSGLSHCLHLEELDLSNNQFGEEGTRVLMGVL 1548

Query: 468  KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
            +    +  L L    +G S    +   LR+   +  L L  NG+ D    GC+ LS    
Sbjct: 1549 EGKCWLKRLDLSHLPLGGSILAVLTQRLRHMTLLQSLRLSRNGVCD---VGCHLLSEALR 1605

Query: 528  AIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
            A  SL+ +    L  N +   GA+ LA     + E L  IDL+ N I   G   +A++L
Sbjct: 1606 AATSLEEL---DLSHNQIGDTGAQLLAVVLPWLPE-LRKIDLSGNGIGPAGGARLAESL 1660



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 9/223 (4%)

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
             L  + +  EG   +   L     +  +DL  N    +G   +  VL+    +  LDL++
Sbjct: 1502 RLTCSCVRSEGLAHLTSGLSHCLHLEELDLSNNQFGEEGTRVLMGVLEGKCWLKRLDLSH 1561

Query: 453  NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
             P+G      L++ L+    + +L+L    +   G   +++ LR   ++  LDL  N + 
Sbjct: 1562 LPLGGSILAVLTQRLRHMTLLQSLRLSRNGVCDVGCHLLSEALRAATSLEELDLSHNQIG 1621

Query: 513  DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
            D   +G   L+     +  L+ +      I    GA+ LA+S  +    L  + L  N +
Sbjct: 1622 D---TGAQLLAVVLPWLPELRKIDLSGNGIGPAGGAR-LAESLALCRH-LEQLMLGCNAL 1676

Query: 573  RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
             D  A  +AQ L  +  +    L+L ++ L   G  +L+ A D
Sbjct: 1677 GDATALGLAQGLPRHLRI----LHLPSSRLGPEGALSLSQALD 1715



 Score = 42.0 bits (97), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 114/317 (35%), Gaps = 44/317 (13%)

Query: 195  VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
            +     G+ A  +      L  +  L  L+ SGN +GDEGV  L  +L     ++ L LS
Sbjct: 987  IRLTHCGLQAKHLAQLCRALGGSCRLSHLDFSGNALGDEGVAQLAQLLPGLGTLQSLNLS 1046

Query: 255  SVDLRDEGAKAIAELLKNNSILRVLELNNNMI------DYSGFTSLA------------- 295
               L  +    + +       L  LE+N+         D +G   LA             
Sbjct: 1047 ENGLSLDSVFILTQCFSTLQWLFHLEVNSESQHVVLRGDRTGRDQLAGGPLPEFPAGAQF 1106

Query: 296  EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             A  +    RS+ L       L    L + LE      E+ L    + D+ +  L++ L 
Sbjct: 1107 SAFDQRCIPRSVCLRQCLLEPLSLTHLCETLEKCPGPLEVKLSCEVLSDQSLETLLNHL- 1165

Query: 356  SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL--------------------- 394
             R  +L++L +    +S +    +A     C  +  ++L                     
Sbjct: 1166 PRLPQLSLLQLSETRLSPRSPLLLANLFSLCPQVQKVDLRSLYHTTLHFRSSEEQKGEFC 1225

Query: 395  --YMN-DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
              +M+  +  E  E +   L +   +  +DL  N +   G   +   L    +  SLDL+
Sbjct: 1226 GRFMDCALSREHVEPLCWLLSKCEDLNQLDLSANLLGDDGLQCLLECLPQLPISASLDLS 1285

Query: 452  YNPIGADGAKALSEVLK 468
            +N I  +GA  L + L 
Sbjct: 1286 HNSISVEGALCLVKTLP 1302


>gi|399497858|emb|CCG20257.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +D  G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           + + G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VDSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|27881632|gb|AAH43670.1| Nod1 protein [Mus musculus]
          Length = 680

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 1/213 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K + E L    I+  L L NN I   G   +A+ L E   ++ L L 
Sbjct: 460 IRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLG 519

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   +A  ++ + S+ ++ + GN IGDEG +A    L      L  L +  N 
Sbjct: 520 KNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPS-LTTLSLAFNG 578

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS +G   +A+ +K   +L  I L  N++ DE AE  A+ L+ N+T+  + L  N I +K
Sbjct: 579 ISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFAEMLRVNQTLRHLWLIQNRITAK 638

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           G + +AR L+ N+ IT + L  N I  + AK  
Sbjct: 639 GTAQLARALQKNTAITEICLNGNLIKPEEAKVF 671



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 39/257 (15%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 446 GVQELQPCFS----RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAR 501

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +  + LG N I S+G   +A  +K+++ I  + +  N IG +GAKA +E
Sbjct: 502 YVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAE 561

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            LK H ++ TL L +  I   G + +A  L+ N T++++ L  N L DE           
Sbjct: 562 ALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDE----------- 610

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+C A+  + VN+ L  + L  N I   G   +A+AL+
Sbjct: 611 ---------------------AAECFAEMLR-VNQTLRHLWLIQNRITAKGTAQLARALQ 648

Query: 586 ANEDVAVTSLNLANNFL 602
            N   A+T + L  N +
Sbjct: 649 KN--TAITEICLNGNLI 663



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 87/170 (51%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A+ L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 497 DIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGA 556

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L D+  +  L L+   +  EG K++A+ LK N+ L V+ L  N ++       A
Sbjct: 557 KAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFA 616

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T+R L L  N   A G   LA+ L+ N ++ E+ L+GN I  E
Sbjct: 617 EMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPE 666



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 86/192 (44%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L E L   +    +    N IT  G +    +L     LK L
Sbjct: 457 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHL 516

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KC+   + ++  +  + +    + DEGAKA AE LK++  L  L L  
Sbjct: 517 KLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAF 576

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  SLA+AL +N+T+  + L  N      A   A+ L  N++LR L L  N I 
Sbjct: 577 NGISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFAEMLRVNQTLRHLWLIQNRIT 636

Query: 344 DEGIRALMSGLS 355
            +G   L   L 
Sbjct: 637 AKGTAQLARALQ 648



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 74/153 (48%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E R    + +       EG   +A ++  + +  +V    N I   G KAF   L+ + +
Sbjct: 509 ECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPS 568

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +  + L+  +L DE A+  AE+L+ N  LR L
Sbjct: 569 LTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFAEMLRVNQTLRHL 628

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA AL +N+ I  + LNGN
Sbjct: 629 WLIQNRITAKGTAQLARALQKNTAITEICLNGN 661



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K L E L  +  +  L L   QI   GA +VA +L       
Sbjct: 455 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQIL------- 507

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KC+A + K  + ++
Sbjct: 508 ----------DE-CRGLKHLKLGKNRITS--------------EGGKCVALAVKN-STSI 541

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             + +  N+I D+GA A A+ALK  +  ++T+L+LA N ++  G  +L  A
Sbjct: 542 VDVGMWGNQIGDEGAKAFAEALK--DHPSLTTLSLAFNGISPEGGKSLAQA 590


>gi|395830995|ref|XP_003788597.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Otolemur garnettii]
          Length = 953

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   + +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKG-LMYLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  I ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++AR
Sbjct: 803 CLALAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++++E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTCLRIFWLTKNELNDEVAESMAEMLKVNQTLKHLWLIQNQITARGLARLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I  + L  N ++ E
Sbjct: 923 NTGIMEICLHGNPIKPE 939



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 5/217 (2%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K + E L    I+  L L NN I   G   +++ L E   +  L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLMYLKLG 792

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   LA  ++ +KS+ ++ + GN IGDEG +A    L +    L  L +  N 
Sbjct: 793 KNKITSEGGKCLALAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPS-LTNLSLAFNG 851

Query: 371 ISAKGAFHVAEYIKN--CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           IS +G   +A  ++   C  + W+    N++ DE AE +A+ LK N+T+  + L  N I 
Sbjct: 852 ISTEGGKSLARALQQNTCLRIFWLT--KNELNDEVAESMAEMLKVNQTLKHLWLIQNQIT 909

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           ++G + +A  L++N+ I  + L  NPI  + AK   +
Sbjct: 910 ARGLARLADALQNNTGIMEICLHGNPIKPEEAKVFED 946



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 4/170 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   + + ++ LY N I D GA 
Sbjct: 719 GVQQLQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            ++  L + + +  + LG N I S+G   +A  +K++  I  + +  N IG +GAKA +E
Sbjct: 775 YVSKILDECKGLMYLKLGKNKITSEGGKCLALAVKNSKSIFDIGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
            L+ H ++  L L +  I   G + +A  L+ N  + I  L  N L DEV
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLARALQQNTCLRIFWLTKNELNDEV 884



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + R  + + +      D G  ++++ L   +    +    N IT+ G K   
Sbjct: 746 KVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLMYLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A  L+
Sbjct: 806 LAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR+  L  N ++     S+AE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTCLRIFWLTKNELNDEVAESMAEMLKVNQTLKHLWLIQNQITARGLARLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ LHGN I  E
Sbjct: 926 IMEICLHGNPIKPE 939



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 92/204 (45%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + + +S     D G+  L E L   +    +    N IT  G +    +L     L  L 
Sbjct: 731 TVIRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLMYLK 790

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N
Sbjct: 791 LGKNKITSEGGKCLALAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFN 850

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  SLA AL +N+ +R   L  N      A ++A+ L+ N++L+ L L  N I  
Sbjct: 851 GISTEGGKSLARALQQNTCLRIFWLTKNELNDEVAESMAEMLKVNQTLKHLWLIQNQITA 910

Query: 345 EGIRALMSGLSSRKGKLAVLDIGN 368
            G+  L   L +  G + +   GN
Sbjct: 911 RGLARLADALQNNTGIMEICLHGN 934



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 35/222 (15%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I L +N I D G + + + L + R +T + L  N I   GA  ++++L +   +  L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLMYLKLG 792

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I ++G K L+  +K   +I  + +   QIG  GA+  A+ LR + +++ L L  NG+
Sbjct: 793 KNKITSEGGKCLALAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
             E                                G K LA++ +  N  L    L  NE
Sbjct: 853 STE--------------------------------GGKSLARALQQ-NTCLRIFWLTKNE 879

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + D+ A ++A+ LK N+   +  L L  N +T  G + L DA
Sbjct: 880 LNDEVAESMAEMLKVNQ--TLKHLWLIQNQITARGLARLADA 919



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 33/72 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++     DE    +AE L  NQT + +    N ITA G+      LQ+N  +  + L GN
Sbjct: 875 LTKNELNDEVAESMAEMLKVNQTLKHLWLIQNQITARGLARLADALQNNTGIMEICLHGN 934

Query: 229 PIGDEGVKCLCD 240
           PI  E  K   D
Sbjct: 935 PIKPEEAKVFED 946


>gi|154421447|ref|XP_001583737.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121917980|gb|EAY22751.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 713

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 169/365 (46%), Gaps = 21/365 (5%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK   +    IG      + +IL  +   + +QL+   + ++GA   A+L+ N S +  +
Sbjct: 72  LKVFQMESTSIGPLASASIRNILTVHPNFKVIQLAGNSIGNKGAIEFAQLILNTSSIVSI 131

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG------GALGANALAKGLEGNKSLR 333
           +L++N I+  G  ++  A+  N TI SL+L    G      G   A AL++ L  N  L 
Sbjct: 132 DLSSNGIEDKGMAAIFNAMRRNKTIISLNLGSRPGMTRNSIGNEAAAALSQMLANNLVLS 191

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L    I  E +  + SGLS +   L  L++ NN+I ++G   +   + + + +  + 
Sbjct: 192 ELDLSMVEITVENVGTIASGLS-KNTTLCELNLSNNNIQSRGVAQILPCLVSSR-VSALR 249

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N + D+     A+  KQN+ + TID+  N + ++  + IA  +     I   +L+ N
Sbjct: 250 LSGNHLKDDCGTYFANFFKQNKNVNTIDISNNGLTARFIATIAPTITKCEAIKEFNLSKN 309

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+    A+  S+++  +  + +L L  C+I  +G +  A  L  N  + +L+L  N LRD
Sbjct: 310 PLTGRSAEIFSKIISANSTLKSLILQACKIDLTGIKEFALGLAQNRGLQVLNLSNNSLRD 369

Query: 514 EVCSGCNGLSFFHSAIYSLK--HMLFYSLCINYLQGAKCLAQSFKVV--NEALTSIDLAF 569
           +      GL     A  S +    LF  L      G K     F  +  +E + SI +  
Sbjct: 370 D------GLDSLSRAFVSQRGLEQLFLDLT---EMGDKSCDSIFTALSKSETIKSISIKN 420

Query: 570 NEIRD 574
           N ++D
Sbjct: 421 NLVKD 425



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 147/356 (41%), Gaps = 36/356 (10%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           F  + ++G + G++G    A+ +    +   +  ++NGI   G+ A    ++ N  + +L
Sbjct: 100 FKVIQLAGNSIGNKGAIEFAQLILNTSSIVSIDLSSNGIEDKGMAAIFNAMRRNKTIISL 159

Query: 224 NLSGNP------IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           NL   P      IG+E    L  +L +N  +  L LS V++  E    IA  L  N+ L 
Sbjct: 160 NLGSRPGMTRNSIGNEAAAALSQMLANNLVLSELDLSMVEITVENVGTIASGLSKNTTLC 219

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L L+NN I   G   +   L+ +S + +L L+GN+         A   + NK++     
Sbjct: 220 ELNLSNNNIQSRGVAQILPCLV-SSRVSALRLSGNHLKDDCGTYFANFFKQNKNVN---- 274

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
                                     +DI NN ++A+    +A  I  C+++   NL  N
Sbjct: 275 -------------------------TIDISNNGLTARFIATIAPTITKCEAIKEFNLSKN 309

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +    AE  +  +  N T+ ++ L    I   G    A  L  N  +  L+L+ N +  
Sbjct: 310 PLTGRSAEIFSKIISANSTLKSLILQACKIDLTGIKEFALGLAQNRGLQVLNLSNNSLRD 369

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           DG  +LS        +  L L   ++G    + +   L  + TI  + ++ N ++D
Sbjct: 370 DGLDSLSRAFVSQRGLEQLFLDLTEMGDKSCDSIFTALSKSETIKSISIKNNLVKD 425



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 13/315 (4%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+V ++ +  I      S+   L  +   + + L GN  G  GA   A+ +    S+  +
Sbjct: 72  LKVFQMESTSIGPLASASIRNILTVHPNFKVIQLAGNSIGNKGAIEFAQLILNTSSIVSI 131

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN------NSISAKGAFHVAEYIKNCKSL 389
            L  N I D+G+ A+ + +  R   +  L++G+      NSI  + A  +++ + N   L
Sbjct: 132 DLSSNGIEDKGMAAIFNAMR-RNKTIISLNLGSRPGMTRNSIGNEAAAALSQMLANNLVL 190

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L M +I  E    IA  L +N T+  ++L  NNI S+G + I   L  +S +++L 
Sbjct: 191 SELDLSMVEITVENVGTIASGLSKNTTLCELNLSNNNIQSRGVAQILPCLV-SSRVSALR 249

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L+ N +  D     +   K + N+NT+ +    + A     +A  +     I   +L  N
Sbjct: 250 LSGNHLKDDCGTYFANFFKQNKNVNTIDISNNGLTARFIATIAPTITKCEAIKEFNLSKN 309

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAF 569
            L           S   SA  +LK ++  +  I+ L G K  A      N  L  ++L+ 
Sbjct: 310 PL---TGRSAEIFSKIISANSTLKSLILQACKID-LTGIKEFALGL-AQNRGLQVLNLSN 364

Query: 570 NEIRDDGAFAIAQAL 584
           N +RDDG  ++++A 
Sbjct: 365 NSLRDDGLDSLSRAF 379



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 74/374 (19%), Positives = 158/374 (42%), Gaps = 36/374 (9%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F K+ +  +++D+S        +  +A ++   +  +E + + N +T    + F  ++ +
Sbjct: 266 FFKQNKNVNTIDISNNGLTARFIATIAPTITKCEAIKEFNLSKNPLTGRSAEIFSKIISA 325

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  LK+L L    I   G+K     L  N G++ L LS+  LRD+G  +++    +   L
Sbjct: 326 NSTLKSLILQACKIDLTGIKEFALGLAQNRGLQVLNLSNNSLRDDGLDSLSRAFVSQRGL 385

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY--GGALGANALAKGLEGNKSLRE 334
             L L+   +      S+  AL ++ TI+S+ +  N    GA     + + ++ N   R+
Sbjct: 386 EQLFLDLTEMGDKSCDSIFTALSKSETIKSISIKNNLVKDGA----PILQFIQNNSKCRK 441

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +  N I    I+ +   +S  K +    +    +   +    +   + +C+ +  I  
Sbjct: 442 LSIEYNDISYAYIQQISKAVSQNKHRWQQQNESKTTSGTRSLEELENELNDCREM--IKA 499

Query: 395 YMNDI-------GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD------ 441
             +DI        +   E+I     Q   ++T++     I  +GAS   R L D      
Sbjct: 500 QRDDIISLNTSLENAQKEQIETRKNQIHNLSTLE-----IVDRGASKTLRNLLDENRNYL 554

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           + +   L++A        +   +E  +F+ +++        I + G +  A+  +Y   +
Sbjct: 555 DKMDHELNVAKQEFNVIASDLDNERERFNADMSG-------IASLGRQIEANQEKYEKEL 607

Query: 502 SILDLRANGLRDEV 515
             LD++   +RD++
Sbjct: 608 HELDVQ---IRDKI 618


>gi|123407026|ref|XP_001302916.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121884250|gb|EAX89986.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 564

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 217/478 (45%), Gaps = 32/478 (6%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI-TAAGIKAFDGVLQSNIALKT 222
            ++V++SG    D       E++  N    ++    N + T + ++ FD +L+SN  +  
Sbjct: 30  INTVNLSGFEMDDSTTNRFCEAMNRNYFISKIILCKNSLSTHSCMQIFD-LLKSNPKIIY 88

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVE---RLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +S N + D  ++ L  IL+    +     L L   +    GAK+IA  +  N+ +  L
Sbjct: 89  LEISDNCVNDSSLEYLSTILISLPSIRDPITLILRKNEFTQYGAKSIARFISLNAPVSWL 148

Query: 280 ELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +L  N+ I   G   +A +L  N+ +  L L     G  GA A++  L  N+SL+ L L 
Sbjct: 149 DLRGNSQITDEGIQLIARSLETNTILSLLDLIKCGCGKDGAAAISDSLTKNRSLKTLLLQ 208

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            +   D  I +L + LS+    L  L +   +++      + + +K   SL+ + L  N 
Sbjct: 209 -DKFEDPAISSLGTLLSNPLCSLEQLYLWKCNLTTPLLEKLCDSLKTNHSLVTLALSYNG 267

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             DE    ++  +  N +I  + LG NN     A  ++  +  N  + +LDL+ N + ++
Sbjct: 268 FEDETVFALSKMIYSNTSIKKLHLGSNNFSCASAGFLSIAISQNKTLENLDLSRNFLNSN 327

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           G   ++  L+ + +I  L +    I ASGA  ++D+  +N +I+ + L  N   D   + 
Sbjct: 328 GLWPIAVALESNSHIQYLDIRDNNIDASGAVLISDLFLHNKSITTVRLSRNMFGDAAVAL 387

Query: 519 CNGLSFFHSAIYSLKH---ML----FYSLC-----------INYLQGAKCL--AQSFK-- 556
            +G    +S +  ++    M+    F +LC           I+  Q   C+   ++FK  
Sbjct: 388 LSGTFRSNSTLRDVELDDVMMTSRGFIALCSALSQNKAIERISVSQNRLCVKAMRAFKDL 447

Query: 557 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             + + L S+ L+   I D     IA+ L  N   ++ S++++NN  T  G S + D+
Sbjct: 448 LAITKTLASVSLSHCNIDDSCCLQIAEGLSLNS--SLRSIDISNNIYTVAGLSVIADS 503



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 149/336 (44%), Gaps = 14/336 (4%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E++      +T   ++     L++N +L TL LS N   DE V  L  ++  N  +++L 
Sbjct: 231 EQLYLWKCNLTTPLLEKLCDSLKTNHSLVTLALSYNGFEDETVFALSKMIYSNTSIKKLH 290

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L S +     A  ++  +  N  L  L+L+ N ++ +G   +A AL  NS I+ L +  N
Sbjct: 291 LGSNNFSCASAGFLSIAISQNKTLENLDLSRNFLNSNGLWPIAVALESNSHIQYLDIRDN 350

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
              A GA  ++     NKS+  + L  N  GD  + AL+SG       L  +++ +  ++
Sbjct: 351 NIDASGAVLISDLFLHNKSITTVRLSRNMFGDAAV-ALLSGTFRSNSTLRDVELDDVMMT 409

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           ++G   +   +   K++  I++  N +  +      D L   +T+ ++ L   NI     
Sbjct: 410 SRGFIALCSALSQNKAIERISVSQNRLCVKAMRAFKDLLAITKTLASVSLSHCNIDDSCC 469

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF-- 490
             IA  L  NS + S+D++ N     G   +++      N    ++ +      G +F  
Sbjct: 470 LQIAEGLSLNSSLRSIDISNNIYTVAGLSVIAD--SIMNNYTLCRIDYFGCNIEGDDFAK 527

Query: 491 -----VADMLR----YNNTISILDLRANGLRDEVCS 517
                ++D +     YN+ I++ ++      +E+CS
Sbjct: 528 SVGGRISDCIERNDYYNHNITMKEMGLLATCEELCS 563



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 6/251 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +   NF      FL+ ++  N+T E +  + N + + G+      L+SN  ++ L++  N
Sbjct: 291 LGSNNFSCASAGFLSIAISQNKTLENLDLSRNFLNSNGLWPIAVALESNSHIQYLDIRDN 350

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I   G   + D+ + N  +  ++LS     D     ++   ++NS LR +EL++ M+  
Sbjct: 351 NIDASGAVLISDLFLHNKSITTVRLSRNMFGDAAVALLSGTFRSNSTLRDVELDDVMMTS 410

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            GF +L  AL +N  I  + ++ N        A    L   K+L  + L   +I D    
Sbjct: 411 RGFIALCSALSQNKAIERISVSQNRLCVKAMRAFKDLLAITKTLASVSLSHCNIDDSCCL 470

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GDEGAE-- 405
            +  GL S    L  +DI NN  +  G   +A+ I N  +L  I+ +  +I GD+ A+  
Sbjct: 471 QIAEGL-SLNSSLRSIDISNNIYTVAGLSVIADSIMNNYTLCRIDYFGCNIEGDDFAKSV 529

Query: 406 --KIADALKQN 414
             +I+D +++N
Sbjct: 530 GGRISDCIERN 540



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 1/260 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S   F DE +F L++ +  N + +++   +N  + A        +  N  L+ L+LS N
Sbjct: 263 LSYNGFEDETVFALSKMIYSNTSIKKLHLGSNNFSCASAGFLSIAISQNKTLENLDLSRN 322

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            +   G+  +   L  N+ ++ L +   ++   GA  I++L  +N  +  + L+ NM   
Sbjct: 323 FLNSNGLWPIAVALESNSHIQYLDIRDNNIDASGAVLISDLFLHNKSITTVRLSRNMFGD 382

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +    L+     NST+R + L+     + G  AL   L  NK++  + +  N +  + +R
Sbjct: 383 AAVALLSGTFRSNSTLRDVELDDVMMTSRGFIALCSALSQNKAIERISVSQNRLCVKAMR 442

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A    L+  K  LA + + + +I       +AE +    SL  I++  N     G   IA
Sbjct: 443 AFKDLLAITK-TLASVSLSHCNIDDSCCLQIAEGLSLNSSLRSIDISNNIYTVAGLSVIA 501

Query: 409 DALKQNRTITTIDLGGNNIH 428
           D++  N T+  ID  G NI 
Sbjct: 502 DSIMNNYTLCRIDYFGCNIE 521


>gi|146164017|ref|XP_001012847.2| hypothetical protein TTHERM_00093930 [Tetrahymena thermophila]
 gi|146145876|gb|EAR92602.2| hypothetical protein TTHERM_00093930 [Tetrahymena thermophila
           SB210]
          Length = 1124

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 198/406 (48%), Gaps = 52/406 (12%)

Query: 218 IALKTLNLSGNPIGDEGV----KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKN 272
           I +  L+LS N  G EG+    +CL ++L D   VE ++L      D+ A  IA+ + KN
Sbjct: 417 IKILNLDLSSNMFGLEGIAQVSECL-EVLKDLVNVE-VKLRQNQFNDDQANTIAKSIEKN 474

Query: 273 NSILRV-LELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLEGN 329
            +I+++ L+L +N I   G   +A+A+ +   +  L+L+   N  G  GA  +   L+  
Sbjct: 475 LNIIQLRLDLRSNSIYSEGVAYIAKAIEKYKNLIDLNLDFCENNIGLDGAIEIGNALQKQ 534

Query: 330 KSLRELHLHGNS--IGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNC 386
           K++ +L L  N   IG  G++ ++  +   K    + LD GNNSI  +GA+ ++  ++  
Sbjct: 535 KNISKLGLFFNQTQIGMNGVKKIVGEIQDYKHITDLSLDFGNNSIGVEGAYCISNTLQEY 594

Query: 387 KSLLWINLYM--NDIGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLK-- 440
           K+L  + LY+  N IG  G   +A+A++  QN T  T+ L  N I   G  +I++ ++  
Sbjct: 595 KNLTKLRLYLKKNQIGVNGVNSLANAIQDYQNLTHLTLFLRKNQIGIDGTKSISKAIEKY 654

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ--IGASGAEFVADMLRYN 498
           +N    SLDL+ N IG +G   LS  L  + NI+ L + + Q  I   GA  +A  L   
Sbjct: 655 ENIQELSLDLSDNQIGDEGTIILSTALAKNQNISYLLINFSQNQITQDGANALATSLENL 714

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSF-KV 557
             IS L L  NG       GC                          QG+  ++Q+  K+
Sbjct: 715 LKISKLKLILNG----NTLGC--------------------------QGSVSISQALEKL 744

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
            N +   +DL+ N++   GA  IA A++ N+ +   SL+   NF+T
Sbjct: 745 QNISKLYLDLSENQVYIGGAMGIANAIQNNKQIKSLSLSFQQNFIT 790



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 220/448 (49%), Gaps = 34/448 (7%)

Query: 166 SVDMSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGITAAGIKAFDGVLQS--NIALK 221
            +D +  + GD+G F +A++    Y  T   ++   N + + G+KA    L++  +I   
Sbjct: 271 QIDFNNCSIGDDGCFEIAKNFKSFYGVTHLALNLKNNQLGSVGLKAIIDSLKNFKDIISL 330

Query: 222 TLNLSGNPIGDEGVKCLCDILVD--NAGVERLQLSSVDLRDEGAKAIAELLKNNSILR-- 277
           TLN  GN +    +K L + L D  N     L LS  ++   G++ I+ +LKN   L+  
Sbjct: 331 TLNFEGNQLSIPNLKNLTESLSDYKNCTDFNLNLSKSNIEFFGSEHISTILKNFKKLQNL 390

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLEGNKSLR-- 333
            L+L+NN I     + +A  L E  +I+ L+L+   N  G  G   +++ LE  K L   
Sbjct: 391 HLDLSNNKICDKALSYIASGLSECESIKILNLDLSSNMFGLEGIAQVSECLEVLKDLVNV 450

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           E+ L  N   D+    +   +      + + LD+ +NSI ++G  ++A+ I+  K+L+ +
Sbjct: 451 EVKLRQNQFNDDQANTIAKSIEKNLNIIQLRLDLRSNSIYSEGVAYIAKAIEKYKNLIDL 510

Query: 393 NLYM--NDIGDEGAEKIADALKQNRTITTIDLGGNN--IHSKGASAIARVLKDNSVIT-- 446
           NL    N+IG +GA +I +AL++ + I+ + L  N   I   G   I   ++D   IT  
Sbjct: 511 NLDFCENNIGLDGAIEIGNALQKQKNISKLGLFFNQTQIGMNGVKKIVGEIQDYKHITDL 570

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLR-YNNTISI 503
           SLD   N IG +GA  +S  L+ + N+  L+L     QIG +G   +A+ ++ Y N   +
Sbjct: 571 SLDFGNNSIGVEGAYCISNTLQEYKNLTKLRLYLKKNQIGVNGVNSLANAIQDYQNLTHL 630

Query: 504 -LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ----GAKCLAQSF-KV 557
            L LR N +      G +G      AI   +++   SL ++  Q    G   L+ +  K 
Sbjct: 631 TLFLRKNQI------GIDGTKSISKAIEKYENIQELSLDLSDNQIGDEGTIILSTALAKN 684

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALK 585
            N +   I+ + N+I  DGA A+A +L+
Sbjct: 685 QNISYLLINFSQNQITQDGANALATSLE 712



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 234/498 (46%), Gaps = 63/498 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESL-GYNQTAE-EVSFAANGITAAGIKAFDGVLQS--NIALKT 222
           +D+   +   EG+ ++A+++  Y    +  + F  N I   G       LQ   NI+   
Sbjct: 482 LDLRSNSIYSEGVAYIAKAIEKYKNLIDLNLDFCENNIGLDGAIEIGNALQKQKNISKLG 541

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQL----SSVDLRDEGAKAIAELL---KNNSI 275
           L  +   IG  GVK +   + D   +  L L    +S+ +  EGA  I+  L   KN + 
Sbjct: 542 LFFNQTQIGMNGVKKIVGEIQDYKHITDLSLDFGNNSIGV--EGAYCISNTLQEYKNLTK 599

Query: 276 LRVLELNNNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           LR L L  N I  +G  SLA A+   +N T  +L L  N  G  G  +++K +E  ++++
Sbjct: 600 LR-LYLKKNQIGVNGVNSLANAIQDYQNLTHLTLFLRKNQIGIDGTKSISKAIEKYENIQ 658

Query: 334 ELHLH--GNSIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           EL L    N IGDEG   L + L+  +     +++   N I+  GA  +A  ++N   + 
Sbjct: 659 ELSLDLSDNQIGDEGTIILSTALAKNQNISYLLINFSQNQITQDGANALATSLENLLKIS 718

Query: 391 WINLYMN--DIGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            + L +N   +G +G+  I+ AL+  QN +   +DL  N ++  GA  IA  +++N  I 
Sbjct: 719 KLKLILNGNTLGCQGSVSISQALEKLQNISKLYLDLSENQVYIGGAMGIANAIQNNKQIK 778

Query: 447 SLDLAY--NPIGADGAKALSEVLKFHGNINTLKLGWC--QIGASGAEFVADMLR-YNNTI 501
           SL L++  N I  D AK++ +++  +  I  L+L +   QIG S  + +A  L  +N+  
Sbjct: 779 SLSLSFQQNFITGDEAKSVIDIISSYQKIKILELNFNNNQIGLSCVQSIASTLNTHNSNF 838

Query: 502 SILDLR--------------ANGLRDEVCS--------------GCNGLSFFHSAIYSLK 533
           + L L               A GL+   C               G  G      AI + +
Sbjct: 839 TKLSLYLKESQIGQEGAKSIAQGLKR--CKFLIQLALQLSKNNIGLEGTQAIAKAISNYQ 896

Query: 534 HMLFYSLCI--NYL--QGAKCLAQSFK-VVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
           ++   +L +  N +  QGAK +A++ +   N    ++DL+ N+I   G  +I+ +++  +
Sbjct: 897 NITQLTLLLADNQIIGQGAKFIAEAIENYQNIKQLNLDLSINQIEISGFTSISHSIQKLQ 956

Query: 589 DVAVTSLNLANNFLTKFG 606
            +   SLNL++N + K+G
Sbjct: 957 KIQKLSLNLSSNPIDKYG 974



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 171/363 (47%), Gaps = 22/363 (6%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEE--VSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S+D+S    GDEG   L+ +L  NQ      ++F+ N IT  G  A    L++ + +  L
Sbjct: 661  SLDLSDNQIGDEGTIILSTALAKNQNISYLLINFSQNQITQDGANALATSLENLLKISKL 720

Query: 224  NL--SGNPIGDEGVKCLCDIL--VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L  +GN +G +G   +   L  + N     L LS   +   GA  IA  ++NN  ++ L
Sbjct: 721  KLILNGNTLGCQGSVSISQALEKLQNISKLYLDLSENQVYIGGAMGIANAIQNNKQIKSL 780

Query: 280  EL--NNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLE---GNKSL 332
             L    N I      S+ + +     I+ L LN   N  G     ++A  L     N + 
Sbjct: 781  SLSFQQNFITGDEAKSVIDIISSYQKIKILELNFNNNQIGLSCVQSIASTLNTHNSNFTK 840

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLW 391
              L+L  + IG EG +++  GL   K  + + L +  N+I  +G   +A+ I N +++  
Sbjct: 841  LSLYLKESQIGQEGAKSIAQGLKRCKFLIQLALQLSKNNIGLEGTQAIAKAISNYQNITQ 900

Query: 392  INLYM--NDIGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT- 446
            + L +  N I  +GA+ IA+A++  QN     +DL  N I   G ++I+  ++    I  
Sbjct: 901  LTLLLADNQIIGQGAKFIAEAIENYQNIKQLNLDLSINQIEISGFTSISHSIQKLQKIQK 960

Query: 447  -SLDLAYNPIGADGAKALSEVLKFHGNIN--TLKLGWCQIGASGAEFVADMLRYNNTISI 503
             SL+L+ NPI   G   +S++++   NI+   L LG CQI  +  + + + L     IS 
Sbjct: 961  LSLNLSSNPIDKYGCNTISKIIRRCQNISKLNLSLGSCQINDAIFDPILNCLESKQNISS 1020

Query: 504  LDL 506
            L L
Sbjct: 1021 LTL 1023


>gi|449274476|gb|EMC83618.1| Ribonuclease inhibitor [Columba livia]
          Length = 456

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 197/454 (43%), Gaps = 22/454 (4%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-I 241
           AE L   ++ + +      ++++  +    ++  N +L  L L+ N +GD G++ LC  +
Sbjct: 16  AELLSTMKSCKTIRLDDCNLSSSNCEDLCSIINMNPSLTELKLNNNELGDAGMEYLCKGL 75

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-E 300
           L+ +  +++L L + +L     + +  +L     L  L + +N +   G   L + ++  
Sbjct: 76  LMPSCSLQKLWLQNCNLTSASCETLCSVLSAQPSLTELHVGDNKLGTGGVKVLCQGMMNP 135

Query: 301 NSTIRSLHLNGNYGGALG--ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           N  ++ L L   Y    G    AL   L+   +L+EL L  N++GD  ++ L  GL    
Sbjct: 136 NCKLQKLQLE--YCELTGDIVEALNVALQSKPTLKELSLSNNTLGDTAVKQLCRGLVEAS 193

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTI 417
             L +L + N  I++     ++  + N  SL+ +++  N IGD G   +   L   N  I
Sbjct: 194 CNLELLHLENCGITSDSCREISAVLSNKSSLIDLSVGDNKIGDSGLALLCQGLMHPNCKI 253

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTL 476
             + L   ++ S     ++R+L     +T + L  N +   G + L + LK     +  L
Sbjct: 254 QKLWLWDCDLTSASCKDLSRLLSTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQEL 313

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHM 535
            +  C +  +  + ++  L  N  + +L +  N L D  V   C GL      I SL   
Sbjct: 314 WIRECGLTTACCKAISSALSVNKHLKVLHMGENKLGDAGVELMCEGLLHPSCNIQSL--- 370

Query: 536 LFYSLCINYLQGAKCLAQ-SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
            +   C   L  A C    +     + LT +DL++N + D+G   I +AL+ N    V  
Sbjct: 371 -WLGNC--DLTAACCATLGTVMATKQCLTELDLSYNSLEDEGVRKICEALR-NPSCNVQQ 426

Query: 595 LNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 628
           L L + F      S+  D +    E S+ EV I 
Sbjct: 427 LILYDIF-----WSSEVDDELRALEESKPEVKII 455



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 166/357 (46%), Gaps = 5/357 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAAGIKAFDGVLQSNIALK 221
           + + + ++    GD G+ +L + L     + +  +  N  +T+A  +    VL +  +L 
Sbjct: 52  SLTELKLNNNELGDAGMEYLCKGLLMPSCSLQKLWLQNCNLTSASCETLCSVLSAQPSLT 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L++  N +G  GVK LC  +++ N  +++LQL   +L  +  +A+   L++   L+ L 
Sbjct: 112 ELHVGDNKLGTGGVKVLCQGMMNPNCKLQKLQLEYCELTGDIVEALNVALQSKPTLKELS 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           L+NN +  +    L   L+E S  +  LHL      +     ++  L    SL +L +  
Sbjct: 172 LSNNTLGDTAVKQLCRGLVEASCNLELLHLENCGITSDSCREISAVLSNKSSLIDLSVGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G+  L  GL     K+  L + +  +++     ++  +   ++L  I+L  N++
Sbjct: 232 NKIGDSGLALLCQGLMHPNCKIQKLWLWDCDLTSASCKDLSRLLSTKETLTEISLIDNNL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            D G E +  ALK  ++ +  + +    + +    AI+  L  N  +  L +  N +G  
Sbjct: 292 RDSGMEMLCQALKDPKSKLQELWIRECGLTTACCKAISSALSVNKHLKVLHMGENKLGDA 351

Query: 459 GAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           G + + E +L    NI +L LG C + A+    +  ++     ++ LDL  N L DE
Sbjct: 352 GVELMCEGLLHPSCNIQSLWLGNCDLTAACCATLGTVMATKQCLTELDLSYNSLEDE 408



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 4/327 (1%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITA 204
           L   S +TL        + + + +     G  G+  L + +   N   +++      +T 
Sbjct: 92  LTSASCETLCSVLSAQPSLTELHVGDNKLGTGGVKVLCQGMMNPNCKLQKLQLEYCELTG 151

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGA 263
             ++A +  LQS   LK L+LS N +GD  VK LC  LV+ +  +E L L +  +  +  
Sbjct: 152 DIVEALNVALQSKPTLKELSLSNNTLGDTAVKQLCRGLVEASCNLELLHLENCGITSDSC 211

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
           + I+ +L N S L  L + +N I  SG   L + L+  N  I+ L L      +     L
Sbjct: 212 REISAVLSNKSSLIDLSVGDNKIGDSGLALLCQGLMHPNCKIQKLWLWDCDLTSASCKDL 271

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           ++ L   ++L E+ L  N++ D G+  L   L   K KL  L I    ++      ++  
Sbjct: 272 SRLLSTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWIRECGLTTACCKAISSA 331

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +   K L  +++  N +GD G E + + L   +  I ++ LG  ++ +   + +  V+  
Sbjct: 332 LSVNKHLKVLHMGENKLGDAGVELMCEGLLHPSCNIQSLWLGNCDLTAACCATLGTVMAT 391

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLK 468
              +T LDL+YN +  +G + + E L+
Sbjct: 392 KQCLTELDLSYNSLEDEGVRKICEALR 418


>gi|301774444|ref|XP_002922630.1| PREDICTED: ribonuclease inhibitor-like [Ailuropoda melanoleuca]
          Length = 363

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 9/320 (2%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRD 260
           ++ A   A   VL ++  L  L  S   +    +K LC+ L D N  +++L+L +  L +
Sbjct: 25  LSPAPCGALAAVLSTSQWLTDLEFSETKLEASALKLLCEDLKDPNCKLQKLKLCASLLPE 84

Query: 261 EG---AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGA 316
                 K +A +L  N  L  L+L+ N +  +G   L E L   N  +  L L+  Y   
Sbjct: 85  SPEVVCKYLAAVLICNPNLTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCYLTD 144

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                L+  L+ +++L+EL +  +++GD G++ L  GL   KG L  L +   S+SA   
Sbjct: 145 ASCMELSSFLQVSQTLKELFVFASALGDTGVQHLCEGLRHAKGILENLVLSECSLSAACC 204

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-- 434
             +A+ + + +SL  + L  N I D G + + + LKQ       DL   N H  G     
Sbjct: 205 ESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQ-PDCQLKDLALWNCHLTGECCQD 263

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVAD 493
           +   L  N  +  LDL+ N +G  G + L E LK     ++TL L  C +  +    +A 
Sbjct: 264 LCNALYTNEYLRDLDLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAECHLTDACCGALAS 323

Query: 494 MLRYNNTISILDLRANGLRD 513
           +L  N  +++LDL  N L+D
Sbjct: 324 VLNRNENLTLLDLSGNDLKD 343



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 13/258 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +D+S    GD G+ +L E L + N   E++  +   +T A        LQ +  LK 
Sbjct: 103 LTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCYLTDASCMELSSFLQVSQTLKE 162

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L +  + +GD GV+ LC+ L    G+ E L LS   L     +++A++L +   L  L L
Sbjct: 163 LFVFASALGDTGVQHLCEGLRHAKGILENLVLSECSLSAACCESLAQVLSSTRSLTRLLL 222

Query: 282 NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            NN I+  G   L E L      L++  + + HL G          L   L  N+ LR+L
Sbjct: 223 INNKIEDLGLKLLCEGLKQPDCQLKDLALWNCHLTGEC-----CQDLCNALYTNEYLRDL 277

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N++G+ G++ L  GL     KL  L +    ++      +A  +   ++L  ++L 
Sbjct: 278 DLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAECHLTDACCGALASVLNRNENLTLLDLS 337

Query: 396 MNDIGDEGAEKIADALKQ 413
            ND+ D G + + D+L Q
Sbjct: 338 GNDLKDFGVQMLCDSLIQ 355



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 127/322 (39%), Gaps = 24/322 (7%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N  +++L L           ALA  L  ++ L +L      +    ++ L   L     K
Sbjct: 12  NCILQTLRLYRCLLSPAPCGALAAVLSTSQWLTDLEFSETKLEASALKLLCEDLKDPNCK 71

Query: 361 LAVLDIG----NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NR 415
           L  L +       S      +  A  I N  +L  ++L  N +GD G + + + L+  N 
Sbjct: 72  LQKLKLCASLLPESPEVVCKYLAAVLICN-PNLTELDLSENPLGDTGVKYLCEGLRHSNC 130

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNIN 474
            +  +DL    +       ++  L+ +  +  L +  + +G  G + L E L+   G + 
Sbjct: 131 KVEKLDLSTCYLTDASCMELSSFLQVSQTLKELFVFASALGDTGVQHLCEGLRHAKGILE 190

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE----VCSGCNGLSFFHSAIY 530
            L L  C + A+  E +A +L    +++ L L  N + D     +C G            
Sbjct: 191 NLVLSECSLSAACCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEG------LKQPDC 244

Query: 531 SLKHMLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
            LK +  ++    +L G  C  L  +    NE L  +DL+ N + + G   + + LK + 
Sbjct: 245 QLKDLALWNC---HLTGECCQDLCNAL-YTNEYLRDLDLSDNALGNGGMQVLCEGLK-HP 299

Query: 589 DVAVTSLNLANNFLTKFGQSAL 610
              + +L LA   LT     AL
Sbjct: 300 SCKLHTLWLAECHLTDACCGAL 321


>gi|344270472|ref|XP_003407068.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Loxodonta africana]
          Length = 953

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 5/233 (2%)

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NNN+ DY G   L       + IR   L+ N     G   L + L   K +  L L+ N 
Sbjct: 712 NNNLNDY-GVQELQPCFSRLTIIR---LSVNQITDRGVKVLYEELTKYKIVTFLGLYNNQ 767

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D G + +   L   K  LA L +G   I++ G   +A  +KN KS+  + ++ N +GD
Sbjct: 768 ITDVGAKYVARILEECKS-LAYLKLGLIIIASDGGICLALAVKNSKSICDVGMWGNTVGD 826

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA+  A+AL+ + ++T++ L  N I ++G  ++AR L+ N+ +  L L  N +  + A+
Sbjct: 827 EGAKAFAEALRNHPSLTSLSLAFNGISTEGGKSLARALQQNTSLRILWLTKNELNDEVAE 886

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +L+E+LK +  +  L L   QI A G   +AD L+ N  I+ + L  N ++ E
Sbjct: 887 SLAEMLKINQTLQHLWLIQNQITAKGVAHLADALQENTGITEICLNGNLIKPE 939



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 39/283 (13%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N++ D G++ L    S    +L ++ +  N I+ +G   + E +   K + ++ L
Sbjct: 708 LSLDNNNLNDYGVQELQPCFS----RLTIIRLSVNQITDRGVKVLYEELTKYKIVTFLGL 763

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ +A  L++ +++  + LG   I S G   +A  +K++  I  + +  N 
Sbjct: 764 YNNQITDVGAKYVARILEECKSLAYLKLGLIIIASDGGICLALAVKNSKSICDVGMWGNT 823

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G +GAKA +E L+ H ++ +L L +  I   G + +A  L+ N ++ IL L  N L DE
Sbjct: 824 VGDEGAKAFAEALRNHPSLTSLSLAFNGISTEGGKSLARALQQNTSLRILWLTKNELNDE 883

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
           V                                A+ LA+  K +N+ L  + L  N+I  
Sbjct: 884 V--------------------------------AESLAEMLK-INQTLQHLWLIQNQITA 910

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
            G   +A AL+  E+  +T + L  N +         D K ++
Sbjct: 911 KGVAHLADALQ--ENTGITEICLNGNLIKPEEAKVFEDEKRII 951



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 112/229 (48%), Gaps = 5/229 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GAK +A +L+    L  L
Sbjct: 730 LTIIRLSVNQITDRGVKVLYEELTKYKIVTFLGLYNNQITDVGAKYVARILEECKSLAYL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L   +I   G   LA A+  + +I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGLIIIASDGGICLALAVKNSKSICDVGMWGNTVGDEGAKAFAEALRNHPSLTSLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L  +   L +L +  N ++ + A  +AE +K  ++L  + L  N I
Sbjct: 850 NGISTEGGKSLARAL-QQNTSLRILWLTKNELNDEVAESLAEMLKINQTLQHLWLIQNQI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             +G   +ADAL++N  IT I L GN I  +     A+V +D   I  L
Sbjct: 909 TAKGVAHLADALQENTGITEICLNGNLIKPEE----AKVFEDEKRIICL 953



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 136/322 (42%), Gaps = 45/322 (13%)

Query: 188 YNQTAEEV-SFAANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEG 234
           Y   +E+V   AA GI A  +K            A   VL        L+L  N + D G
Sbjct: 660 YETQSEKVGKLAARGICANYLKLTFCNAYSADCSALSFVLHHFRKRLALSLDNNNLNDYG 719

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           V+ L       + +  ++LS   + D G K + E L    I+  L L NN I   G   +
Sbjct: 720 VQELQPCF---SRLTIIRLSVNQITDRGVKVLYEELTKYKIVTFLGLYNNQITDVGAKYV 776

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A  L E  ++  L L      + G   LA  ++ +KS+ ++ + GN++GDEG +A     
Sbjct: 777 ARILEECKSLAYLKLGLIIIASDGGICLALAVKNSKSICDVGMWGNTVGDEGAKAF---- 832

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
                                    AE ++N  SL  ++L  N I  EG + +A AL+QN
Sbjct: 833 -------------------------AEALRNHPSLTSLSLAFNGISTEGGKSLARALQQN 867

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
            ++  + L  N ++ + A ++A +LK N  +  L L  N I A G   L++ L+ +  I 
Sbjct: 868 TSLRILWLTKNELNDEVAESLAEMLKINQTLQHLWLIQNQITAKGVAHLADALQENTGIT 927

Query: 475 TLKLGWCQIGASGAEFVADMLR 496
            + L    I    A+   D  R
Sbjct: 928 EICLNGNLIKPEEAKVFEDEKR 949



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 73/131 (55%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA ++  +++  +V    N +   G KAF   L+++ +L +L+L+ N I  EG K L   
Sbjct: 804 LALAVKNSKSICDVGMWGNTVGDEGAKAFAEALRNHPSLTSLSLAFNGISTEGGKSLARA 863

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  L L+  +L DE A+++AE+LK N  L+ L L  N I   G   LA+AL EN
Sbjct: 864 LQQNTSLRILWLTKNELNDEVAESLAEMLKINQTLQHLWLIQNQITAKGVAHLADALQEN 923

Query: 302 STIRSLHLNGN 312
           + I  + LNGN
Sbjct: 924 TGITEICLNGN 934



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 92/202 (45%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G K    +L+   +L  L L 
Sbjct: 733 IRLSVNQITDRGVKVLYEELTKYKIVTFLGLYNNQITDVGAKYVARILEECKSLAYLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
              I  +G  CL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 LIIIASDGGICLALAVKNSKSICDVGMWGNTVGDEGAKAFAEALRNHPSLTSLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+++R L L  N      A +LA+ L+ N++L+ L L  N I  +G
Sbjct: 853 STEGGKSLARALQQNTSLRILWLTKNELNDEVAESLAEMLKINQTLQHLWLIQNQITAKG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           +  L   L    G   +   GN
Sbjct: 913 VAHLADALQENTGITEICLNGN 934



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 49/271 (18%)

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL------ 389
            +HG       +R +    S + GKLA   I  N +  K  F  A Y  +C +L      
Sbjct: 645 QVHGMPTFIWMLRCIYETQSEKVGKLAARGICANYL--KLTFCNA-YSADCSALSFVLHH 701

Query: 390 ----LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
               L ++L  N++ D G +++     +   +T I L  N I  +G   +   L    ++
Sbjct: 702 FRKRLALSLDNNNLNDYGVQELQPCFSR---LTIIRLSVNQITDRGVKVLYEELTKYKIV 758

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T L L  N I   GAK ++ +L+   ++  LKLG   I + G   +A  ++ + +I  + 
Sbjct: 759 TFLGLYNNQITDVGAKYVARILEECKSLAYLKLGLIIIASDGGICLALAVKNSKSICDVG 818

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSI 565
           +  N + DE                                GAK  A++ +  + +LTS+
Sbjct: 819 MWGNTVGDE--------------------------------GAKAFAEALRN-HPSLTSL 845

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
            LAFN I  +G  ++A+AL+ N  + +  L 
Sbjct: 846 SLAFNGISTEGGKSLARALQQNTSLRILWLT 876


>gi|320167612|gb|EFW44511.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 635

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 1/124 (0%)

Query: 391 WIN-LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           W+N L  N IGD GA+ IA+ALK N T+TT++LG N I + GA AIA+ LK N+ IT L+
Sbjct: 3   WVNSLDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLN 62

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L +  I   GA+ ++E LK +  + TL LG  QIG +GA+ +A+ L+ N  +  L L  N
Sbjct: 63  LQHVQISDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNEN 122

Query: 510 GLRD 513
            + D
Sbjct: 123 QIGD 126



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 84/143 (58%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +AE +K   ++  +NL  N IG+ GA+ IA ALK N TIT ++L    I 
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA  IA  LK N+ +T+L L  N IG  GA+A++E LK +  ++TL L   QIG +GA
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGA 129

Query: 489 EFVADMLRYNNTISILDLRANGL 511
           + +A+ L+ N  + +L L  N +
Sbjct: 130 QAIAEALKVNKRLILLILDENSI 152



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 79/151 (52%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   G +A    L+ N  + TLNL  N IG+ G + +   L  N  +  L L  V + 
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+ IAE LK N+ L  L L  N I  +G  ++AEAL  N  + +L LN N  G  GA
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGA 129

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            A+A+ L+ NK L  L L  NSI +  I AL
Sbjct: 130 QAIAEALKVNKRLILLILDENSISESAINAL 160



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 1/131 (0%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G +A+   L      +  L++G+N I   GA  +A+ +K   ++  +NL    I
Sbjct: 10  NQIGDVGAQAIAEALKVNT-TVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQI 68

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA+ IA+ALK N T+TT+ LG N I   GA AIA  LK N  + +L L  N IG  G
Sbjct: 69  SDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAG 128

Query: 460 AKALSEVLKFH 470
           A+A++E LK +
Sbjct: 129 AQAIAEALKVN 139



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IGD G + + + L  N  V  L L    + + GA+AIA+ LK N+ +  L L +
Sbjct: 6   SLDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQH 65

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             I  +G  ++AEAL  N+T+ +L L  N  G  GA A+A+ L+ NK L  L L+ N IG
Sbjct: 66  VQISDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIG 125

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           D G +A+   L   K +L +L +  NSIS
Sbjct: 126 DAGAQAIAEALKVNK-RLILLILDENSIS 153



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 1/158 (0%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G +GA A+A+ L+ N ++  L+L  N IG+ G +A+   L      +  L++ +
Sbjct: 7   LDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNT-TITGLNLQH 65

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
             IS  GA  +AE +K   +L  + L  N IGD GA+ IA+ALK N+ + T+ L  N I 
Sbjct: 66  VQISDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIG 125

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
             GA AIA  LK N  +  L L  N I      AL +V
Sbjct: 126 DAGAQAIAEALKVNKRLILLILDENSISESAINALKQV 163



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 1/158 (0%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L+ N I   G  ++AEAL  N+T+ +L+L  N  G  GA A+A+ L+ N ++  L+L   
Sbjct: 7   LDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHV 66

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I D G + +   L      L  L +G N I   GA  +AE +K  K L  + L  N IG
Sbjct: 67  QISDAGAQTIAEALKVNT-TLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIG 125

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           D GA+ IA+ALK N+ +  + L  N+I     +A+ +V
Sbjct: 126 DAGAQAIAEALKVNKRLILLILDENSISESAINALKQV 163



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 33/164 (20%)

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N I   GA AIA  LK N+ +T+L+L  N IG  GA+A+++ LK +  I  L L   QI 
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
            +GA+ +A+ L+ N T++ L L  N + D                               
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDA------------------------------ 99

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
             GA+ +A++ KV N+ L ++ L  N+I D GA AIA+ALK N+
Sbjct: 100 --GAQAIAEALKV-NKKLDTLFLNENQIGDAGAQAIAEALKVNK 140



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 37/169 (21%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           + SLD  +N IG  GA+A++E LK +  + TL LG  QIG +GA+ +A  L+ N TI+  
Sbjct: 4   VNSLD--FNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTIT-- 59

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
                           GL+  H  I                 GA+ +A++ KV N  LT+
Sbjct: 60  ----------------GLNLQHVQISDA--------------GAQTIAEALKV-NTTLTT 88

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + L  N+I D GA AIA+ALK N+ +    LN   N +   G  A+ +A
Sbjct: 89  LGLGRNQIGDAGAQAIAEALKVNKKLDTLFLN--ENQIGDAGAQAIAEA 135



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 72/152 (47%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  N T   ++   N I  AG +A    L+ N  +  LNL    I D
Sbjct: 11  QIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQISD 70

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  +  L L    + D GA+AIAE LK N  L  L LN N I  +G  
Sbjct: 71  AGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGAQ 130

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           ++AEAL  N  +  L L+ N       NAL +
Sbjct: 131 AIAEALKVNKRLILLILDENSISESAINALKQ 162



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +++++     G+ G   +A++L  N T   ++     I+ AG +   
Sbjct: 18  QAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQISDAGAQTIA 77

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L TL L  N IGD G + + + L  N  ++ L L+   + D GA+AIAE LK
Sbjct: 78  EALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGAQAIAEALK 137

Query: 272 NNSILRVLELNNNMIDYSGFTSLAE 296
            N  L +L L+ N I  S   +L +
Sbjct: 138 VNKRLILLILDENSISESAINALKQ 162


>gi|320166182|gb|EFW43081.1| hypothetical protein CAOG_08213 [Capsaspora owczarzaki ATCC 30864]
          Length = 633

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 32/178 (17%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL  N+T+  L   GN  G +GA A+A+ L+ NK+L  L+L+ N IGD G +A   
Sbjct: 39  AIAEALKVNTTLTQL---GNQIGDVGAQAIAEALKVNKTLTLLYLNVNQIGDAGAQA--- 92

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                                     +AE ++  K+L  +NL  N +GD GA+ I +ALK
Sbjct: 93  --------------------------IAEALQVNKTLTLLNLSANRLGDAGAQAIGEALK 126

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
            N T+  + LG N I   GA AIA  LK N+ +T L L  N IG  GA+AL+E LKF 
Sbjct: 127 VNTTLAGLGLGENQIGDVGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALKFE 184



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 4/163 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L    IGDE  +A+   L   K    +  +GN  I   GA  +AE +K  K+L  + L
Sbjct: 25  LFLSAKQIGDEEAKAIAEAL---KVNTTLTQLGNQ-IGDVGAQAIAEALKVNKTLTLLYL 80

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            +N IGD GA+ IA+AL+ N+T+T ++L  N +   GA AI   LK N+ +  L L  N 
Sbjct: 81  NVNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLGLGENQ 140

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           IG  GA+A++E LK +  +  L L   QIG +GA+ +A+ L++
Sbjct: 141 IGDVGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALKF 183



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 87/156 (55%), Gaps = 3/156 (1%)

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
           K K   L +    I  + A  +AE +K   +L  +    N IGD GA+ IA+ALK N+T+
Sbjct: 19  KNKSGTLFLSAKQIGDEEAKAIAEALKVNTTLTQLG---NQIGDVGAQAIAEALKVNKTL 75

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T + L  N I   GA AIA  L+ N  +T L+L+ N +G  GA+A+ E LK +  +  L 
Sbjct: 76  TLLYLNVNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLG 135

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           LG  QIG  GA+ +A+ L+ N T++ L L  N + D
Sbjct: 136 LGENQIGDVGAQAIAEALKVNTTLTELYLWQNQIGD 171



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 3/147 (2%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  L  L   GN IGD G + + + L  N  +  L L+   + D GA+AIA
Sbjct: 38  KAIAEALKVNTTLTQL---GNQIGDVGAQAIAEALKVNKTLTLLYLNVNQIGDAGAQAIA 94

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E L+ N  L +L L+ N +  +G  ++ EAL  N+T+  L L  N  G +GA A+A+ L+
Sbjct: 95  EALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLGLGENQIGDVGAQAIAEALK 154

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGL 354
            N +L EL+L  N IGD G +AL   L
Sbjct: 155 VNTTLTELYLWQNQIGDAGAQALAEAL 181



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 86/168 (51%), Gaps = 3/168 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S +  GDE    +AE+L  N T  ++    N I   G +A    L+ N  L  L L+ N
Sbjct: 27  LSAKQIGDEEAKAIAEALKVNTTLTQL---GNQIGDVGAQAIAEALKVNKTLTLLYLNVN 83

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N  +  L LS+  L D GA+AI E LK N+ L  L L  N I  
Sbjct: 84  QIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLGLGENQIGD 143

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
            G  ++AEAL  N+T+  L+L  N  G  GA ALA+ L+  +   + H
Sbjct: 144 VGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALKFEQEFPDQH 191



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 38/210 (18%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T+ L    I  + A AIA  LK N+ +T L    N IG  GA+A++E LK +  +  L L
Sbjct: 24  TLFLSAKQIGDEEAKAIAEALKVNTTLTQLG---NQIGDVGAQAIAEALKVNKTLTLLYL 80

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
              QIG +GA+ +A+ L+ N T+++L+L AN L D                         
Sbjct: 81  NVNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDA------------------------ 116

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                   GA+ + ++ KV N  L  + L  N+I D GA AIA+ALK N    +T L L 
Sbjct: 117 --------GAQAIGEALKV-NTTLAGLGLGENQIGDVGAQAIAEALKVN--TTLTELYLW 165

Query: 599 NNFLTKFGQSALTDAKDLVYEMSEKEVNIF 628
            N +   G  AL +A     E  ++  N +
Sbjct: 166 QNQIGDAGAQALAEALKFEQEFPDQHCNHY 195



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 4/172 (2%)

Query: 143 TGKLFRESKQTLNEFAKE----LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           +G LF  +KQ  +E AK     L+  +++   G   GD G   +AE+L  N+T   +   
Sbjct: 22  SGTLFLSAKQIGDEEAKAIAEALKVNTTLTQLGNQIGDVGAQAIAEALKVNKTLTLLYLN 81

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I  AG +A    LQ N  L  LNLS N +GD G + + + L  N  +  L L    +
Sbjct: 82  VNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLGLGENQI 141

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
            D GA+AIAE LK N+ L  L L  N I  +G  +LAEAL         H N
Sbjct: 142 GDVGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALKFEQEFPDQHCN 193


>gi|291239051|ref|XP_002739438.1| PREDICTED: leucine rich repeat containing 45-like [Saccoglossus
           kowalevskii]
          Length = 546

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 31/296 (10%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S + M     G  G   +A +L  N T  +++ A N + + G +A   +L+ N  +  L+
Sbjct: 148 SELTMKHHGLGPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIAELD 207

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N + D+G K + D+L +N  +  + L+     D+ A+  AE++  NS L  + L+ N
Sbjct: 208 LSDNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRN 267

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
               +    L  A+ EN TIR L L+ N+    GA ALAKG+  N  LR++ L  N +G+
Sbjct: 268 SFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSWNGLGN 327

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           E                             GA  + E +K   SL  ++L  N I  EGA
Sbjct: 328 E-----------------------------GALAIGEALKMNNSLEELDLTNNRISPEGA 358

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD--NSVITSLDLAYNPIGAD 458
             +A  L  N T+  + +G N + + G   I + +K+  N+ I  LD +   +  D
Sbjct: 359 VLLAKGLAVNETLRVLKVGKNPMQTAGCYGIVKAVKENANTAIEQLDFSDIQVNKD 414



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E++   +G+  AG +A    L +N  +  LNL+ N +  EG + + D+L +N  +  L L
Sbjct: 149 ELTMKHHGLGPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIAELDL 208

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S   L D+GAKA+A++LK N  L  + L  N          AE +L+NS + +++L+ N 
Sbjct: 209 SDNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNS 268

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
                   L   +  N ++R+L                             D+  N I  
Sbjct: 269 FSEAAGLLLGPAISENITIRQL-----------------------------DLSWNHIRR 299

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           KGA  +A+ I +   L  ++L  N +G+EGA  I +ALK N ++  +DL  N I  +GA 
Sbjct: 300 KGAVALAKGIGSNIGLRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAV 359

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            +A+ L  N  +  L +  NP+   G   + + +K + N    +L +  I
Sbjct: 360 LLAKGLAVNETLRVLKVGKNPMQTAGCYGIVKAVKENANTAIEQLDFSDI 409



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 34/284 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+AIA  L  N+ +  L L +N +D  G  ++A+ L EN  I  L L+ N     GA A
Sbjct: 161 GARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIAELDLSDNRLSDDGAKA 220

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A  L+ N +L  + L GN  GD                             K A   AE
Sbjct: 221 MADMLKENVNLHSVTLAGNGFGD-----------------------------KSAEGFAE 251

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I     L  +NL  N   +     +  A+ +N TI  +DL  N+I  KGA A+A+ +  
Sbjct: 252 VILQNSKLENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGS 311

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  +  +DL++N +G +GA A+ E LK + ++  L L   +I   GA  +A  L  N T+
Sbjct: 312 NIGLRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAVLLAKGLAVNETL 371

Query: 502 SILDLRANGLRDEVCSGCNGL--SFFHSAIYSLKHMLFYSLCIN 543
            +L +  N ++    +GC G+  +   +A  +++ + F  + +N
Sbjct: 372 RVLKVGKNPMQ---TAGCYGIVKAVKENANTAIEQLDFSDIQVN 412



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A  L  N ++ +L+L  N +  EG +A+   L      +A LD+ +N +S  
Sbjct: 158 GPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLK-ENCYIAELDLSDNRLSDD 216

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ +K   +L  + L  N  GD+ AE  A+ + QN  +  ++L  N+        
Sbjct: 217 GAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSFSEAAGLL 276

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   + +N  I  LDL++N I   GA AL++ +  +  +  + L W  +G  GA  + + 
Sbjct: 277 LGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSWNGLGNEGALAIGEA 336

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQS 554
           L+ NN++  LDL  N +  E                                GA  LA+ 
Sbjct: 337 LKMNNSLEELDLTNNRISPE--------------------------------GAVLLAKG 364

Query: 555 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
              VNE L  + +  N ++  G + I +A+K N + A+  L+ ++
Sbjct: 365 L-AVNETLRVLKVGKNPMQTAGCYGIVKAVKENANTAIEQLDFSD 408



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 11/210 (5%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G  GA  IA  L  N TI  ++L  N + S+G  A+A +LK+N  I  LDL+ N +  D
Sbjct: 157 LGPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIAELDLSDNRLSDD 216

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GAKA++++LK + N++++ L     G   AE  A+++  N+ +  ++L  N       S 
Sbjct: 217 GAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSF-----SE 271

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
             GL     AI     +    L  N++  +GA  LA+     N  L  +DL++N + ++G
Sbjct: 272 AAGL-LLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGS-NIGLRKVDLSWNGLGNEG 329

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           A AI +ALK N   ++  L+L NN ++  G
Sbjct: 330 ALAIGEALKMNN--SLEELDLTNNRISPEG 357



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 9/231 (3%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L + ++ +   GA  +A  +    ++L +NL  N +  EG + +AD LK+N  I  +DL 
Sbjct: 150 LTMKHHGLGPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIAELDLS 209

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N +   GA A+A +LK+N  + S+ LA N  G   A+  +EV+  +  +  + L     
Sbjct: 210 DNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSF 269

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
             +    +   +  N TI  LDL  N +R +      G       I S   +    L  N
Sbjct: 270 SEAAGLLLGPAISENITIRQLDLSWNHIRRK------GAVALAKGIGSNIGLRKVDLSWN 323

Query: 544 YL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
            L  +GA  + ++ K+ N +L  +DL  N I  +GA  +A+ L  NE + V
Sbjct: 324 GLGNEGALAIGEALKM-NNSLEELDLTNNRISPEGAVLLAKGLAVNETLRV 373



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 96/197 (48%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  E  Q + +  KE    + +D+S     D+G   +A+ L  N     V+ A NG    
Sbjct: 185 LDSEGGQAVADMLKENCYIAELDLSDNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDK 244

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
             + F  V+  N  L+ +NLS N   +     L   + +N  + +L LS   +R +GA A
Sbjct: 245 SAEGFAEVILQNSKLENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVA 304

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +A+ + +N  LR ++L+ N +   G  ++ EAL  N+++  L L  N     GA  LAKG
Sbjct: 305 LAKGIGSNIGLRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAVLLAKG 364

Query: 326 LEGNKSLRELHLHGNSI 342
           L  N++LR L +  N +
Sbjct: 365 LAVNETLRVLKVGKNPM 381



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 87/185 (47%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           +L  +  + + +  KE     SV ++G  FGD+     AE +  N   E ++ + N  + 
Sbjct: 212 RLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSFSE 271

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A        +  NI ++ L+LS N I  +G   L   +  N G+ ++ LS   L +EGA 
Sbjct: 272 AAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSWNGLGNEGAL 331

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AI E LK N+ L  L+L NN I   G   LA+ L  N T+R L +  N     G   + K
Sbjct: 332 AIGEALKMNNSLEELDLTNNRISPEGAVLLAKGLAVNETLRVLKVGKNPMQTAGCYGIVK 391

Query: 325 GLEGN 329
            ++ N
Sbjct: 392 AVKEN 396



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++++S  +F +     L  ++  N T  ++  + N I   G  A    + SNI L+ +
Sbjct: 259 LENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKV 318

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N +G+EG   + + L  N  +E L L++  +  EGA  +A+ L  N  LRVL++  
Sbjct: 319 DLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAVLLAKGLAVNETLRVLKVGK 378

Query: 284 NMIDYSGFTSLAEALLENS 302
           N +  +G   + +A+ EN+
Sbjct: 379 NPMQTAGCYGIVKAVKENA 397


>gi|156392108|ref|XP_001635891.1| predicted protein [Nematostella vectensis]
 gi|156222989|gb|EDO43828.1| predicted protein [Nematostella vectensis]
          Length = 447

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 1/205 (0%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+A+    T++  HL+ +         L   L  + SL  L L  N IGD G RA+   
Sbjct: 235 LAKAVKACHTLKVFHLHRSQVDDEKVRVLVSHLLDHPSLITLDLSHNKIGDSGARAIGKL 294

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L+ R  KL +L++ +N I + GA  +   +     L  IN+ +N +GD+G + I  AL +
Sbjct: 295 LNGR-CKLTILNLCDNKIRSNGAAAIGHALGKNTILKNINIRLNRLGDDGGQAICRALLK 353

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N T+T + LGGN++    A+ +A+VL  N V+  L+L+ N IG DG K+L E ++ + +I
Sbjct: 354 NETLTHVHLGGNDLGEPTAAILAQVLVANKVLVELNLSCNKIGPDGGKSLQEGMEENSSI 413

Query: 474 NTLKLGWCQIGASGAEFVADMLRYN 498
             + L   ++G      +  +L+ N
Sbjct: 414 LLMDLRLTEVGQESEYCINQLLKRN 438



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 1/197 (0%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK  +L  + + DE V+ L   L+D+  +  L LS   + D GA+AI +LL     L +
Sbjct: 244 TLKVFHLHRSQVDDEKVRVLVSHLLDHPSLITLDLSHNKIGDSGARAIGKLLNGRCKLTI 303

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +N I  +G  ++  AL +N+ ++++++  N  G  G  A+ + L  N++L  +HL 
Sbjct: 304 LNLCDNKIRSNGAAAIGHALGKNTILKNINIRLNRLGDDGGQAICRALLKNETLTHVHLG 363

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN +G E   A+++ +      L  L++  N I   G   + E ++   S+L ++L + +
Sbjct: 364 GNDLG-EPTAAILAQVLVANKVLVELNLSCNKIGPDGGKSLQEGMEENSSILLMDLRLTE 422

Query: 399 IGDEGAEKIADALKQNR 415
           +G E    I   LK+NR
Sbjct: 423 VGQESEYCINQLLKRNR 439



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 38/238 (15%)

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           + +    +A+ +K C +L   +L+ + + DE    +   L  + ++ T+DL  N I   G
Sbjct: 228 TTRDCLLLAKAVKACHTLKVFHLHRSQVDDEKVRVLVSHLLDHPSLITLDLSHNKIGDSG 287

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A AI ++L     +T L+L  N I ++GA A+   L  +  +  + +   ++G  G + +
Sbjct: 288 ARAIGKLLNGRCKLTILNLCDNKIRSNGAAAIGHALGKNTILKNINIRLNRLGDDGGQAI 347

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
              L  N T++ + L  N L +                                  A  L
Sbjct: 348 CRALLKNETLTHVHLGGNDLGEPT--------------------------------AAIL 375

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
           AQ   V N+ L  ++L+ N+I  DG  ++ + ++ N  + +  L      LT+ GQ +
Sbjct: 376 AQVL-VANKVLVELNLSCNKIGPDGGKSLQEGMEENSSILLMDLR-----LTEVGQES 427



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 67/139 (48%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++D+S    GD G   + + L        ++   N I + G  A    L  N  LK +N+
Sbjct: 275 TLDLSHNKIGDSGARAIGKLLNGRCKLTILNLCDNKIRSNGAAAIGHALGKNTILKNINI 334

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N +GD+G + +C  L+ N  +  + L   DL +  A  +A++L  N +L  L L+ N 
Sbjct: 335 RLNRLGDDGGQAICRALLKNETLTHVHLGGNDLGEPTAAILAQVLVANKVLVELNLSCNK 394

Query: 286 IDYSGFTSLAEALLENSTI 304
           I   G  SL E + ENS+I
Sbjct: 395 IGPDGGKSLQEGMEENSSI 413



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           F       LA+++    T +      + +    ++     L  + +L TL+LS N IGD 
Sbjct: 227 FTTRDCLLLAKAVKACHTLKVFHLHRSQVDDEKVRVLVSHLLDHPSLITLDLSHNKIGDS 286

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + +  +L     +  L L    +R  GA AI   L  N+IL+ + +  N +   G  +
Sbjct: 287 GARAIGKLLNGRCKLTILNLCDNKIRSNGAAAIGHALGKNTILKNINIRLNRLGDDGGQA 346

Query: 294 LAEALLENSTIRSLHLNGN----------------------------YGGALGANALAKG 325
           +  ALL+N T+  +HL GN                              G  G  +L +G
Sbjct: 347 ICRALLKNETLTHVHLGGNDLGEPTAAILAQVLVANKVLVELNLSCNKIGPDGGKSLQEG 406

Query: 326 LEGNKSLRELHLHGNSIGDE 345
           +E N S+  + L    +G E
Sbjct: 407 MEENSSILLMDLRLTEVGQE 426



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 50/110 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++++     GD+G   +  +L  N+T   V    N +          VL +N  L  L
Sbjct: 329 LKNINIRLNRLGDDGGQAICRALLKNETLTHVHLGGNDLGEPTAAILAQVLVANKVLVEL 388

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           NLS N IG +G K L + + +N+ +  + L   ++  E    I +LLK N
Sbjct: 389 NLSCNKIGPDGGKSLQEGMEENSSILLMDLRLTEVGQESEYCINQLLKRN 438


>gi|301757851|ref|XP_002914759.1| PREDICTED: uncharacterized protein C14orf166B-like [Ailuropoda
           melanoleuca]
          Length = 493

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 119/228 (52%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N +   G  SL E L EN  ++ ++++ N  G  GA  
Sbjct: 126 GTKAIAIALVSNTSVVTLELADNCLMEEGLLSLVEMLQENYYLQEMNISDNDLGLKGARI 185

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +++ L+ N  SL  L L GN+  DE    L   LS+   ++  LD+ +N  S KG  HV 
Sbjct: 186 ISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALSTNY-QIKTLDLSHNQFSDKGGEHVG 244

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N T+  +DL  N   ++GA+A+  VL+
Sbjct: 245 QMLALNIGLQSLDLSWNHFYIRGAVALCNGLRANMTLQKLDLSMNGFGNEGATALGEVLR 304

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            N+ +  LD++ N I  DG   +S+ L+ + ++  LKL    +   GA
Sbjct: 305 LNNSLVYLDVSSNNINNDGVSKISKGLEVNESLKVLKLFLNPMNMDGA 352



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 148/330 (44%), Gaps = 43/330 (13%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L N     ++LN +  G  G  A+A  L  N S+  L L  N + +EG+ +L+  L   
Sbjct: 106 FLRNMEESYVNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNCLMEEGLLSLVEMLQEN 165

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRT 416
              L  ++I +N +  KGA  ++E+++   S LW + L  N+  DE AE +  AL  N  
Sbjct: 166 Y-YLQEMNISDNDLGLKGARIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALSTNYQ 224

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I T+DL  N    KG   + ++L  N  + SLDL++N     GA AL   L+ +  +  L
Sbjct: 225 IKTLDLSHNQFSDKGGEHVGQMLALNIGLQSLDLSWNHFYIRGAVALCNGLRANMTLQKL 284

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGL-RDEVCSGCNGLSFFHSAIYSLKHM 535
            L     G  GA  + ++LR NN++  LD+ +N +  D V     GL             
Sbjct: 285 DLSMNGFGNEGATALGEVLRLNNSLVYLDVSSNNINNDGVSKISKGLE------------ 332

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-----EDV 590
                                 VNE+L  + L  N +  DGA  +  ++K N     E++
Sbjct: 333 ----------------------VNESLKVLKLFLNPMNMDGAVLLILSIKRNPKSKMEEI 370

Query: 591 AVTSLNLANNFLTKF-GQSALTDAKDLVYE 619
            ++++ ++  FL    G  A+    D++Y+
Sbjct: 371 DISNVLVSEQFLKILDGVCAIHPQLDVMYK 400



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 28/275 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN ++ TL L+ N + +EG+  L ++L +N  +
Sbjct: 109 NMEESYVNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNCLMEEGLLSLVEMLQENYYL 168

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + + +S  DL  +GA+ I+E L+ N+                           S++ +L 
Sbjct: 169 QEMNISDNDLGLKGARIISEFLQRNT---------------------------SSLWNLQ 201

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A  L + L  N  ++ L L  N   D+G   +   L+   G L  LD+  
Sbjct: 202 LSGNNFRDESAELLCQALSTNYQIKTLDLSHNQFSDKGGEHVGQMLALNIG-LQSLDLSW 260

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N    +GA  +   ++   +L  ++L MN  G+EGA  + + L+ N ++  +D+  NNI+
Sbjct: 261 NHFYIRGAVALCNGLRANMTLQKLDLSMNGFGNEGATALGEVLRLNNSLVYLDVSSNNIN 320

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           + G S I++ L+ N  +  L L  NP+  DGA  L
Sbjct: 321 NDGVSKISKGLEVNESLKVLKLFLNPMNMDGAVLL 355



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 131/251 (52%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N +   +  A N +   G+ +   +LQ N  L+ +N
Sbjct: 113 SYVNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNCLMEEGLLSLVEMLQENYYLQEMN 172

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G +G + + + L  N + +  LQLS  + RDE A+ + + L  N  ++ L+L++
Sbjct: 173 ISDNDLGLKGARIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALSTNYQIKTLDLSH 232

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   + + L  N  ++SL L+ N+    GA AL  GL  N +L++L L  N  G
Sbjct: 233 NQFSDKGGEHVGQMLALNIGLQSLDLSWNHFYIRGAVALCNGLRANMTLQKLDLSMNGFG 292

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+ +N+I+  G   +++ ++  +SL  + L++N +  +G
Sbjct: 293 NEGATALGEVL-RLNNSLVYLDVSSNNINNDGVSKISKGLEVNESLKVLKLFLNPMNMDG 351

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 352 AVLLILSIKRN 362



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 40/295 (13%)

Query: 305 RSLHLNG-NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           R L+L      G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  
Sbjct: 88  RELYLEACKLTGVVPVSYFLRNME--ESYVNLNHHG--LGPNGTKAIAIALVSNTS-VVT 142

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDL 422
           L++ +N +  +G   + E ++    L  +N+  ND+G +GA  I++ L++N + +  + L
Sbjct: 143 LELADNCLMEEGLLSLVEMLQENYYLQEMNISDNDLGLKGARIISEFLQRNTSSLWNLQL 202

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GNN   + A  + + L  N  I +LDL++N     G + + ++L  +  + +L L W  
Sbjct: 203 SGNNFRDESAELLCQALSTNYQIKTLDLSHNQFSDKGGEHVGQMLALNIGLQSLDLSWNH 262

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
               GA  + + LR N T+  LDL  NG  +E                            
Sbjct: 263 FYIRGAVALCNGLRANMTLQKLDLSMNGFGNE---------------------------- 294

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
               GA  L +  ++ N +L  +D++ N I +DG   I++ L+ NE + V  L L
Sbjct: 295 ----GATALGEVLRL-NNSLVYLDVSSNNINNDGVSKISKGLEVNESLKVLKLFL 344



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++ +SG NF DE    L ++L  N   + +  + N  +  G +    +L  NI L++L+L
Sbjct: 199 NLQLSGNNFRDESAELLCQALSTNYQIKTLDLSHNQFSDKGGEHVGQMLALNIGLQSLDL 258

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N     G   LC+ L  N  +++L LS     +EGA A+ E+L+ N+ L  L++++N 
Sbjct: 259 SWNHFYIRGAVALCNGLRANMTLQKLDLSMNGFGNEGATALGEVLRLNNSLVYLDVSSNN 318

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK--SLRELHLHGNSIG 343
           I+  G + +++ L  N +++ L L  N     GA  L   ++ N    + E+ +  N + 
Sbjct: 319 INNDGVSKISKGLEVNESLKVLKLFLNPMNMDGAVLLILSIKRNPKSKMEEIDI-SNVLV 377

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            E    ++ G+ +   +L V+       S K A            LLW+N
Sbjct: 378 SEQFLKILDGVCAIHPQLDVMYKSVQGFSEKKAL-----------LLWVN 416



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 142 FTGKLFR-ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
            +G  FR ES + L +         ++D+S   F D+G   + + L  N   + +  + N
Sbjct: 202 LSGNNFRDESAELLCQALSTNYQIKTLDLSHNQFSDKGGEHVGQMLALNIGLQSLDLSWN 261

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
                G  A    L++N+ L+ L+LS N  G+EG   L ++L  N  +  L +SS ++ +
Sbjct: 262 HFYIRGAVALCNGLRANMTLQKLDLSMNGFGNEGATALGEVLRLNNSLVYLDVSSNNINN 321

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           +G   I++ L+ N  L+VL+L  N ++  G
Sbjct: 322 DGVSKISKGLEVNESLKVLKLFLNPMNMDG 351


>gi|145529968|ref|XP_001450767.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418389|emb|CAK83370.1| unnamed protein product [Paramecium tetraurelia]
          Length = 763

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 174/383 (45%), Gaps = 20/383 (5%)

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N +G E  K + DIL+ N     L+L+   + DEG   + E+LK N  +  L+ ++N I 
Sbjct: 183 NQLGLESAKTVRDILLYNNHFSTLRLARNAIGDEGLVELLEMLKVNKNIVHLDFSSNNIT 242

Query: 288 YSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             G   L   L+   +I S+ L      N N     G   +   L+ N  L+ L L G S
Sbjct: 243 ADGAFYLFNELIPLHSIISIELSSKDGLNRNKVSVKGCEPIETILKYNHPLQFLGLRGTS 302

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G   ++SGL +    LA L++ NN ++ +   ++ +YI NC +L+ ++L  N +G+
Sbjct: 303 IQNAGFECILSGLQT-NNTLAYLNVSNNDLNEEACNYMVQYISNC-NLVELDLSYNPLGN 360

Query: 402 EGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G + ++    K +  +  ++L G  I S G     + L  N  +  L L  N    +G 
Sbjct: 361 NGMDYLSRIFDKGSFMLRKLNLAGCEIKSLGILKFFQSLAVNRFLERLILDENHFSGNGF 420

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
             +  VL     +  L +  C I A+GA+F+ + +  N T+  L LR N L D   + C 
Sbjct: 421 NEIENVLTSRIPLTYLSMAKCSINATGADFIGNGVERNRTLKTLILRDNRLTD-AGAECV 479

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
               F   +  LK       C+  L     + QS +     LT++ L  N   D     I
Sbjct: 480 FKGLFFEKL-DLKRCNLTDKCV--LGLCSMIKQSTQ-----LTTLLLPDNGFHDSSGIVI 531

Query: 581 AQALKANEDVAVTSLNLANNFLT 603
            +A++ N   ++ +L++  N L+
Sbjct: 532 CEAIRVNS--SILNLDICENPLS 552



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 156/379 (41%), Gaps = 61/379 (16%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA---- 204
           ES +T+ +       FS++ ++    GDEGL  L E L  N+    + F++N ITA    
Sbjct: 188 ESAKTVRDILLYNNHFSTLRLARNAIGDEGLVELLEMLKVNKNIVHLDFSSNNITADGAF 247

Query: 205 ------------------------------AGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
                                          G +  + +L+ N  L+ L L G  I + G
Sbjct: 248 YLFNELIPLHSIISIELSSKDGLNRNKVSVKGCEPIETILKYNHPLQFLGLRGTSIQNAG 307

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +C+   L  N  +  L +S+ DL +E    + + + N +++  L+L+ N +  +G   L
Sbjct: 308 FECILSGLQTNNTLAYLNVSNNDLNEEACNYMVQYISNCNLVE-LDLSYNPLGNNGMDYL 366

Query: 295 AEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +    + S  +R L+L G    +LG     + L  N+ L  L L  N     G   + + 
Sbjct: 367 SRIFDKGSFMLRKLNLAGCEIKSLGILKFFQSLAVNRFLERLILDENHFSGNGFNEIENV 426

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-- 411
           L+SR   L  L +   SI+A GA  +   ++  ++L  + L  N + D GAE +   L  
Sbjct: 427 LTSR-IPLTYLSMAKCSINATGADFIGNGVERNRTLKTLILRDNRLTDAGAECVFKGLFF 485

Query: 412 ----------------------KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
                                 KQ+  +TT+ L  N  H      I   ++ NS I +LD
Sbjct: 486 EKLDLKRCNLTDKCVLGLCSMIKQSTQLTTLLLPDNGFHDSSGIVICEAIRVNSSILNLD 545

Query: 450 LAYNPIGADGAKALSEVLK 468
           +  NP+       +++V++
Sbjct: 546 ICENPLSYKYIDQINKVIE 564



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 6/235 (2%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNS 274
           SN  L  L+LS NP+G+ G+  L  I    +  + +L L+  +++  G     + L  N 
Sbjct: 344 SNCNLVELDLSYNPLGNNGMDYLSRIFDKGSFMLRKLNLAGCEIKSLGILKFFQSLAVNR 403

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L+ N    +GF  +   L     +  L +      A GA+ +  G+E N++L+ 
Sbjct: 404 FLERLILDENHFSGNGFNEIENVLTSRIPLTYLSMAKCSINATGADFIGNGVERNRTLKT 463

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N + D G   +  GL   K     LD+   +++ K    +   IK    L  + L
Sbjct: 464 LILRDNRLTDAGAECVFKGLFFEK-----LDLKRCNLTDKCVLGLCSMIKQSTQLTTLLL 518

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             N   D     I +A++ N +I  +D+  N +  K    I +V++ N +   LD
Sbjct: 519 PDNGFHDSSGIVICEAIRVNSSILNLDICENPLSYKYIDQINKVIESNRLKYELD 573


>gi|299066813|emb|CBJ38007.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
           solanacearum CMR15]
          Length = 457

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 175/377 (46%), Gaps = 95/377 (25%)

Query: 246 AGVERLQLSSVDLRDE--GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           A + RL L  +++R++  GAK  A LL N+  L  L ++NN I   G    A+AL  N  
Sbjct: 83  AHLSRLPLVRLNVRNKRIGAKG-ARLLANHPTLTSLNVSNNRIGPEG----AQALAGNMR 137

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + +L+++GN  G   A ALA     N++LR L +  N IGDEG R L +       +L  
Sbjct: 138 LTTLNVSGNRLGVEEAKALA----ANQTLRSLDVSDNRIGDEGARVLAACT-----QLTT 188

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA--------------- 408
           LD   N I   GA  +A     C +L  + +  N IGD G   +A               
Sbjct: 189 LDANRNGIGVDGATALAA----CPTLRSLGIGGNAIGDAGVLALAANARLTTLNVESTGV 244

Query: 409 -----DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
                 AL  ++ +T + L GN I + GA+A+A   +    +T+L LA N IGA+GA+AL
Sbjct: 245 GAVGVGALAASKALTWLRLDGNGIGNAGATALAASTR----LTTLHLARNKIGAEGAQAL 300

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLS 523
           +   K      TL LG+ +IG +G   +A     N T+  L +R N L+DE         
Sbjct: 301 AANTKL----TTLDLGYNKIGDTGVRALA----ANATLVSLTVRRNDLKDE--------- 343

Query: 524 FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
              SA+                     LA S       LT++DL+ N I D G    A+A
Sbjct: 344 ---SAVI--------------------LAAS-----RTLTTLDLSGNGIEDQG----AKA 371

Query: 584 LKANEDVAVTSLNLANN 600
           L AN    +T+L++++N
Sbjct: 372 LAANP--TLTTLDVSSN 386



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 142/329 (43%), Gaps = 73/329 (22%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++  +  G +G   LA     + T   ++ + N I   G +A  G    N+ L TLN+S
Sbjct: 93  LNVRNKRIGAKGARLLAN----HPTLTSLNVSNNRIGPEGAQALAG----NMRLTTLNVS 144

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +G E  K L      N  +  L +S   + DEGA+ +A   +    L  L+ N N I
Sbjct: 145 GNRLGVEEAKALAA----NQTLRSLDVSDNRIGDEGARVLAACTQ----LTTLDANRNGI 196

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK--------------------GL 326
              G T+LA       T+RSL + GN  G  G  ALA                      L
Sbjct: 197 GVDGATALAAC----PTLRSLGIGGNAIGDAGVLALAANARLTTLNVESTGVGAVGVGAL 252

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             +K+L  L L GN IG+ G  AL +       +L  L +  N I A+GA  +A   K  
Sbjct: 253 AASKALTWLRLDGNGIGNAGATALAA-----STRLTTLHLARNKIGAEGAQALAANTK-- 305

Query: 387 KSLLWINLYMNDIGDEGAEKIAD--------------------ALKQNRTITTIDLGGNN 426
             L  ++L  N IGD G   +A                      L  +RT+TT+DL GN 
Sbjct: 306 --LTTLDLGYNKIGDTGVRALAANATLVSLTVRRNDLKDESAVILAASRTLTTLDLSGNG 363

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPI 455
           I  +GA A+A     N  +T+LD++ N I
Sbjct: 364 IEDQGAKALA----ANPTLTTLDVSSNDI 388



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 37/257 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+ + G   GD G+  LA     N     ++  + G+ A G+    G L ++ AL  L
Sbjct: 210 LRSLGIGGNAIGDAGVLALA----ANARLTTLNVESTGVGAVGV----GALAASKALTWL 261

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L GN IG+ G   L      +  +  L L+   +  EGA+A+A     N+ L  L+L  
Sbjct: 262 RLDGNGIGNAGATALAA----STRLTTLHLARNKIGAEGAQALAA----NTKLTTLDLGY 313

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  +LA     N+T+ SL +  N      A  LA     +++L  L L GN I 
Sbjct: 314 NKIGDTGVRALAA----NATLVSLTVRRNDLKDESAVILA----ASRTLTTLDLSGNGIE 365

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+G +AL +  +     L  LD+ +N I   GA  +A        L+W++L  N + + G
Sbjct: 366 DQGAKALAANPT-----LTTLDVSSNDIKNAGARALAAN----ARLVWLDLRHNRMEEAG 416

Query: 404 AEKIADALKQNRTITTI 420
                 AL  NRT++++
Sbjct: 417 TR----ALLANRTLSSL 429



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 37/195 (18%)

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I +KGA    R+L ++  +TSL+++ N IG +GA+AL+  ++      TL +   ++G  
Sbjct: 100 IGAKGA----RLLANHPTLTSLNVSNNRIGPEGAQALAGNMRL----TTLNVSGNRLGVE 151

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDE---VCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
            A+ +A     N T+  LD+  N + DE   V + C  L+   +    +           
Sbjct: 152 EAKALA----ANQTLRSLDVSDNRIGDEGARVLAACTQLTTLDANRNGIG---------- 197

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
            + GA  LA         L S+ +  N I D G  A+A       +  +T+LN+ +  + 
Sbjct: 198 -VDGATALAAC-----PTLRSLGIGGNAIGDAGVLALAA------NARLTTLNVESTGVG 245

Query: 604 KFGQSALTDAKDLVY 618
             G  AL  +K L +
Sbjct: 246 AVGVGALAASKALTW 260


>gi|301098077|ref|XP_002898132.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262105493|gb|EEY63545.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 436

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 174/380 (45%), Gaps = 47/380 (12%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS R+ GD     LA S+  N   EE+  + + +   G++AF   L +N  LK L+L   
Sbjct: 28  MSTRSIGDSDFVKLASSISSNTLLEELYLSGHQLGPLGLQAFADCLATNSTLKHLSLGSE 87

Query: 229 PIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            +GDE V+ LC  L  N  +G++   L    L   GA A+AELLK N  L  + L++N I
Sbjct: 88  KLGDEAVQVLCAGLARNTQSGLQNWDLEFKSLGANGAAAVAELLKTNKSLTTVSLSHNQI 147

Query: 287 DYSGFTSLAEALLEN--STIRSLHLN--GNYGGALGA----------------------- 319
              G   LA+ L EN  S ++ L++   G  G  LG                        
Sbjct: 148 GDEGVEKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATLVEKETCSLSTIQLSFNTLE 207

Query: 320 -------NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                  +ALAK    NKS+ +L L    + D+ + AL + L  +   L  +D+ +N ++
Sbjct: 208 SATSTFFDALAK----NKSVTKLQLKECKLSDQHVAALSAAL-KQNTTLVEIDLSDNELT 262

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT-IDLGGNNIHSKG 431
                 +AE +   K+L  + +  N   DEGA  +AD L  N T  T +D+G N + S G
Sbjct: 263 QTSCASLAEGLCENKTLKILRINNNKCQDEGAALLADVLTTNNTTLTYLDMGNNGLTSVG 322

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
              +  +LK  S +T L L  N +G +G   L   L  +  I T  +G  Q+  + +  +
Sbjct: 323 ---MTPLLKAQS-MTQLHLLNNKLG-EGLSELLPALLANAVIETFGIGANQLHEALSVTM 377

Query: 492 ADMLRYNNTISILDLRANGL 511
            D L  + ++  L++  N L
Sbjct: 378 LDALHSHPSLKTLEMGGNTL 397



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 144/314 (45%), Gaps = 37/314 (11%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGV 213
           E  K  ++ ++V +S    GDEG+  LA+ L  N  +  +E++    GI+ +G+     +
Sbjct: 129 ELLKTNKSLTTVSLSHNQIGDEGVEKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATL 188

Query: 214 LQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           ++    +L T+ LS N + +       D L  N  V +LQL    L D+   A++  LK 
Sbjct: 189 VEKETCSLSTIQLSFNTL-ESATSTFFDALAKNKSVTKLQLKECKLSDQHVAALSAALKQ 247

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  ++L++N +  +   SLAE L EN T++ L +N                      
Sbjct: 248 NTTLVEIDLSDNELTQTSCASLAEGLCENKTLKILRIN---------------------- 285

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
                  N   DEG   L   L++    L  LD+GNN +++ G   +   +K  +S+  +
Sbjct: 286 ------NNKCQDEGAALLADVLTTNNTTLTYLDMGNNGLTSVG---MTPLLK-AQSMTQL 335

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N +G EG  ++  AL  N  I T  +G N +H   +  +   L  +  + +L++  
Sbjct: 336 HLLNNKLG-EGLSELLPALLANAVIETFGIGANQLHEALSVTMLDALHSHPSLKTLEMGG 394

Query: 453 NPIGADGAKALSEV 466
           N +G  G  AL ++
Sbjct: 395 NTLGKAGHDALDKL 408



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 33/261 (12%)

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I  S F  LA ++  N+ +  L+L+G+  G LG  A A  L  N +L+ L L    +GDE
Sbjct: 33  IGDSDFVKLASSISSNTLLEELYLSGHQLGPLGLQAFADCLATNSTLKHLSLGSEKLGDE 92

Query: 346 GIRALMSGLS-SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            ++ L +GL+ + +  L   D+   S+ A GA  VAE +K  KSL  ++L  N IGDEG 
Sbjct: 93  AVQVLCAGLARNTQSGLQNWDLEFKSLGANGAAAVAELLKTNKSLTTVSLSHNQIGDEGV 152

Query: 405 EKIADALKQNR-------------------------------TITTIDLGGNNIHSKGAS 433
           EK+A  L +N                                +++TI L  N + S   S
Sbjct: 153 EKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATLVEKETCSLSTIQLSFNTLES-ATS 211

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
                L  N  +T L L    +      ALS  LK +  +  + L   ++  +    +A+
Sbjct: 212 TFFDALAKNKSVTKLQLKECKLSDQHVAALSAALKQNTTLVEIDLSDNELTQTSCASLAE 271

Query: 494 MLRYNNTISILDLRANGLRDE 514
            L  N T+ IL +  N  +DE
Sbjct: 272 GLCENKTLKILRINNNKCQDE 292



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 5/126 (3%)

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG-CNGLSFFHSAIYS 531
           +  L L   Q+G  G +  AD L  N+T+  L L +  L DE     C GL+    +   
Sbjct: 51  LEELYLSGHQLGPLGLQAFADCLATNSTLKHLSLGSEKLGDEAVQVLCAGLARNTQSGLQ 110

Query: 532 LKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
              + F SL  N   GA  +A+  K  N++LT++ L+ N+I D+G   +A+ L  N    
Sbjct: 111 NWDLEFKSLGAN---GAAAVAELLKT-NKSLTTVSLSHNQIGDEGVEKLAKGLSENAQSG 166

Query: 592 VTSLNL 597
           V  LN+
Sbjct: 167 VKELNV 172


>gi|255084115|ref|XP_002508632.1| flagellar autotomy protein [Micromonas sp. RCC299]
 gi|226523909|gb|ACO69890.1| flagellar autotomy protein [Micromonas sp. RCC299]
          Length = 1414

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 7/297 (2%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
            L+ L L    +G +G   L +IL D   AG+ERL L    L  EG +A+   L     L+
Sbjct: 1070 LRFLALGETALGPKGGIALAEILRDGSCAGLERLSLPGAGLGAEGVEAVCAALPPK--LQ 1127

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L++ +N     G  ++ EAL   + ++ + L  N    +GA ALA  +  + SL ELH+
Sbjct: 1128 ALDVGSNGCGDQGAKAVGEALKRCANMKRIGLAANELSEVGARALAPFIRDHASLEELHV 1187

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN-SISAKGAFHVAEYIKNCKSLLWINLYM 396
             GN +GD G  AL   + S    +  L +  N +I+A     +A+ I + ++L  ++L  
Sbjct: 1188 TGNRVGDRGCSALAMAVRSTNAPIVKLALNENFNITAGACKSLAQCIASSRTLQELDLSK 1247

Query: 397  NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
              IG EGA+ +A  L ++  +  ++LG   + + GA  I   L  N  +  L L+ N +G
Sbjct: 1248 VMIGAEGAKALAAGLSESPALRVLELGSCKLRADGAKFIGEALVRNLSLERLGLSRNSLG 1307

Query: 457  ADGA-KALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-RYNNTISILDLRANGL 511
              G  + ++  L+   ++  L L    IG  GA+ +  ML R N  +  L+L  N L
Sbjct: 1308 DKGVFELVAAGLQGSRSLRDLDLRHNSIGPEGAKRLGAMLERKNFVLKNLELAGNKL 1364



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 48/308 (15%)

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNK--SLRELHLHGNSIGDEGIRALMSGLSSRKG 359
            +T+R L L     G  G  ALA+ L       L  L L G  +G EG+ A+ + L     
Sbjct: 1068 ATLRFLALGETALGPKGGIALAEILRDGSCAGLERLSLPGAGLGAEGVEAVCAALPP--- 1124

Query: 360  KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            KL  LD+G+N    +GA  V E +K C ++  I L  N++ + GA  +A  ++ + ++  
Sbjct: 1125 KLQALDVGSNGCGDQGAKAVGEALKRCANMKRIGLAANELSEVGARALAPFIRDHASLEE 1184

Query: 420  IDLGGNNIHSKGASAIARVLKDNS------------------------------VITSLD 449
            + + GN +  +G SA+A  ++  +                               +  LD
Sbjct: 1185 LHVTGNRVGDRGCSALAMAVRSTNAPIVKLALNENFNITAGACKSLAQCIASSRTLQELD 1244

Query: 450  LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            L+   IGA+GAKAL+  L     +  L+LG C++ A GA+F+ + L  N ++  L L  N
Sbjct: 1245 LSKVMIGAEGAKALAAGLSESPALRVLELGSCKLRADGAKFIGEALVRNLSLERLGLSRN 1304

Query: 510  GLRDE-----VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
             L D+     V +G  G          L+H           +GAK L    +  N  L +
Sbjct: 1305 SLGDKGVFELVAAGLQGSRSLRD--LDLRHNSIGP------EGAKRLGAMLERKNFVLKN 1356

Query: 565  IDLAFNEI 572
            ++LA N++
Sbjct: 1357 LELAGNKL 1364



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 141/297 (47%), Gaps = 33/297 (11%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
               + + G   G EG+  +  +L     A +V   +NG    G KA    L+    +K +
Sbjct: 1100 LERLSLPGAGLGAEGVEAVCAALPPKLQALDV--GSNGCGDQGAKAVGEALKRCANMKRI 1157

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             L+ N + + G + L   + D+A +E L ++   + D G  A+A  +++           
Sbjct: 1158 GLAANELSEVGARALAPFIRDHASLEELHVTGNRVGDRGCSALAMAVRST---------- 1207

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA-NALAKGLEGNKSLRELHLHGNSI 342
                             N+ I  L LN N+    GA  +LA+ +  +++L+EL L    I
Sbjct: 1208 -----------------NAPIVKLALNENFNITAGACKSLAQCIASSRTLQELDLSKVMI 1250

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            G EG +AL +GLS     L VL++G+  + A GA  + E +    SL  + L  N +GD+
Sbjct: 1251 GAEGAKALAAGLSESPA-LRVLELGSCKLRADGAKFIGEALVRNLSLERLGLSRNSLGDK 1309

Query: 403  GA-EKIADALKQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGA 457
            G  E +A  L+ +R++  +DL  N+I  +GA  +  +L + N V+ +L+LA N + A
Sbjct: 1310 GVFELVAAGLQGSRSLRDLDLRHNSIGPEGAKRLGAMLERKNFVLKNLELAGNKLDA 1366



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 12/140 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R    +D+S    G EG   LA  L  +     +   +  + A G K     L  N++L+
Sbjct: 1238 RTLQELDLSKVMIGAEGAKALAAGLSESPALRVLELGSCKLRADGAKFIGEALVRNLSLE 1297

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVE-RLQLSSVDLR-----DEGAKAIAELL-KNNS 274
             L LS N +GD+GV  L       AG++    L  +DLR      EGAK +  +L + N 
Sbjct: 1298 RLGLSRNSLGDKGVFELV-----AAGLQGSRSLRDLDLRHNSIGPEGAKRLGAMLERKNF 1352

Query: 275  ILRVLELNNNMIDYSGFTSL 294
            +L+ LEL  N +D S  + L
Sbjct: 1353 VLKNLELAGNKLDASTESKL 1372


>gi|399497902|emb|CCG20279.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TGVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++ G+ + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 124/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +     
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTG 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|17549135|ref|NP_522475.1| GALA protein 1 [Ralstonia solanacearum GMI1000]
 gi|17431386|emb|CAD18065.1| lrr-gala family type III effector protein (gala 1) [Ralstonia
           solanacearum GMI1000]
          Length = 661

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 211/467 (45%), Gaps = 84/467 (17%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+ G   GD G    A++L  N +   +  + N I  AG +A    L +N  L +L
Sbjct: 190 LTALDIRGNGIGDAG----AQALAANTSITSLDASFNDIGVAGARA----LAANTTLTSL 241

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IGDEG++ L      N  +  L + S ++ D GA A+A      S+    +L  
Sbjct: 242 DLGFNAIGDEGLQALA----TNTSLTSLTVGSCEIGDAGAAALANNTALTSV----DLTC 293

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G    AE L  N+ + SL L  N     GA ALA    GN +L  L ++ N I 
Sbjct: 294 NHIGEEG----AEGLAANTVLTSLDLTRNSISDRGAAALA----GNTTLTSLCVNFNDIY 345

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G R L     +    L  LDI  N I   GA  +A+ +    +L  +++    IG EG
Sbjct: 346 GRGARWL-----AENTTLTTLDISYNPIGDWGALGLADNM----TLRSLSVVAGRIGVEG 396

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIA--------------------RVLKDNS 443
           A     AL  N T+TT+D+  N I ++GA A+A                       K N+
Sbjct: 397 AR----ALAGNTTLTTLDISVNAIGNEGAQALAANATLTTLSLRSCELRAAAAEAFKANT 452

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + SLD+  N I A GA+AL++    +  + TL++   QIG +GA+ +A     N +++ 
Sbjct: 453 TLASLDIGENRIEAAGAQALAD----NTALTTLRVTGNQIGMAGAQALA----ANRSLTK 504

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
           L++  N +R    +G   L    +A  SL  +   S  I                N ++T
Sbjct: 505 LNISQNDIR---SAGAQAL----AANTSLTSLDVSSASI------GAAGAQALAANTSIT 551

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            +++  N I D G    AQAL A+   A+TSL   +NF+   G  AL
Sbjct: 552 WLNINDNHIGDAG----AQALAAHP--ALTSLYACDNFIGTAGVQAL 592



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 178/377 (47%), Gaps = 82/377 (21%)

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           ++ L  L++  N I  +G    A+AL  N++I SL  + N  G  GA ALA     N +L
Sbjct: 187 STTLTALDIRGNGIGDAG----AQALAANTSITSLDASFNDIGVAGARALA----ANTTL 238

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L  N+IGDEG++AL +  S     L  L +G+  I   GA  +A           +
Sbjct: 239 TSLDLGFNAIGDEGLQALATNTS-----LTSLTVGSCEIGDAGAAALANNTALTS----V 289

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA---------------- 436
           +L  N IG+EGAE +A     N  +T++DL  N+I  +GA+A+A                
Sbjct: 290 DLTCNHIGEEGAEGLA----ANTVLTSLDLTRNSISDRGAAALAGNTTLTSLCVNFNDIY 345

Query: 437 ----RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
               R L +N+ +T+LD++YNPIG  GA  L++ +       +L +   +IG  GA  +A
Sbjct: 346 GRGARWLAENTTLTTLDISYNPIGDWGALGLADNMTLR----SLSVVAGRIGVEGARALA 401

Query: 493 DMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS-AIYSLK--------------HMLF 537
                N T++ LD+  N + +E   G   L+   +    SL+              +   
Sbjct: 402 G----NTTLTTLDISVNAIGNE---GAQALAANATLTTLSLRSCELRAAAAEAFKANTTL 454

Query: 538 YSLCI--NYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 593
            SL I  N ++  GA+ LA      N ALT++ +  N+I      A AQAL AN   ++T
Sbjct: 455 ASLDIGENRIEAAGAQALAD-----NTALTTLRVTGNQI----GMAGAQALAANR--SLT 503

Query: 594 SLNLANNFLTKFGQSAL 610
            LN++ N +   G  AL
Sbjct: 504 KLNISQNDIRSAGAQAL 520



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 150/301 (49%), Gaps = 41/301 (13%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+S    GD G   LA+    N T   +S  A  I   G +A  G    N  L TL
Sbjct: 358 LTTLDISYNPIGDWGALGLAD----NMTLRSLSVVAGRIGVEGARALAG----NTTLTTL 409

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N IG+EG + L      NA +  L L S +LR     A AE  K N+ L  L++  
Sbjct: 410 DISVNAIGNEGAQALAA----NATLTTLSLRSCELR----AAAAEAFKANTTLASLDIGE 461

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I+ +G    A+AL +N+ + +L + GN  G  GA ALA     N+SL +L++  N I 
Sbjct: 462 NRIEAAG----AQALADNTALTTLRVTGNQIGMAGAQALA----ANRSLTKLNISQNDIR 513

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G +AL +  S     L  LD+ + SI A GA  +A       S+ W+N+  N IGD G
Sbjct: 514 SAGAQALAANTS-----LTSLDVSSASIGAAGAQALAAN----TSITWLNINDNHIGDAG 564

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+    AL  +  +T++    N I + G  A+A     N+ +TSL +  N IG  G KAL
Sbjct: 565 AQ----ALAAHPALTSLYACDNFIGTAGVQALAA----NTRLTSLSIWGNRIGDAGVKAL 616

Query: 464 S 464
           +
Sbjct: 617 A 617


>gi|15239712|ref|NP_197433.1| RAN GTPase-activating protein 2 [Arabidopsis thaliana]
 gi|205829463|sp|Q9M651.2|RAGP2_ARATH RecName: Full=RAN GTPase-activating protein 2; Short=AtRanGAP2;
           Short=RanGAP2
 gi|332005302|gb|AED92685.1| RAN GTPase-activating protein 2 [Arabidopsis thaliana]
          Length = 545

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 30/288 (10%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   LQ +I L +LNLS N +G++GV+    +L   + +E L L +  +  E A+A++EL
Sbjct: 207 FSDALQGSI-LSSLNLSDNALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSEL 265

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEA-----LLEN----------------------- 301
           + +   LRVL  +NNM    G  ++AE      LLEN                       
Sbjct: 266 IPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHC 325

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           + +  L L  N  G     +L+K L   K + EL+L   ++ DEG  A+++ L      +
Sbjct: 326 THMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPI 385

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTI 420
            VL++  N I+ + A  +A  +   + L  +NL  N++ DEG  +IA+ +++  + +  I
Sbjct: 386 EVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEGHSKLQYI 445

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           D+  N I   GA A+A V+        L++  N I  +G + L E+ K
Sbjct: 446 DMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFK 493



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 142/299 (47%), Gaps = 19/299 (6%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRA---LMSGLSSRKGKLAVLDIGNNSISAKGA 376
           N  +  L+G+  L  L+L  N++G++G+RA   L+  LSS    L  L + N+ IS + A
Sbjct: 205 NIFSDALQGS-ILSSLNLSDNALGEKGVRAFGALLKSLSS----LEELYLMNDGISKEAA 259

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             V+E I + ++L  ++ + N  GDEGA  IA+ +K++  +         + SKG  A++
Sbjct: 260 QAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALS 319

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L+  + +  LDL  N  G +   +LS+ L    ++  L L +  +   GA  + + L+
Sbjct: 320 EALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALK 379

Query: 497 YN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--LAQ 553
            + + I +L++  N +  E  S           +  L      +L  N L+   C  +A 
Sbjct: 380 ESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKL------NLSENELKDEGCVQIAN 433

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  +  L  ID++ N IR  GA A+A  +   E  A   LN+  N +++ G   L +
Sbjct: 434 CIEEGHSKLQYIDMSTNYIRRAGARALAHVVVKKE--AFKLLNIDGNIISEEGIEELKE 490



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 3/245 (1%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ Q ++E          +       GDEG   +AE +  +   E    ++  + + G 
Sbjct: 256 KEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGG 315

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L+    ++ L+L  N  G E    L   L     +  L LS ++L DEGA AI 
Sbjct: 316 IALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIV 375

Query: 268 ELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK + S + VLE+  N I     +++A  +     +  L+L+ N     G   +A  +
Sbjct: 376 NALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCI 435

Query: 327 -EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            EG+  L+ + +  N I   G RAL + +  +K    +L+I  N IS +G   + E  K 
Sbjct: 436 EEGHSKLQYIDMSTNYIRRAGARAL-AHVVVKKEAFKLLNIDGNIISEEGIEELKEIFKK 494

Query: 386 CKSLL 390
              LL
Sbjct: 495 SPELL 499


>gi|320165895|gb|EFW42794.1| interleukin-1 receptor-associated kinase 4 [Capsaspora owczarzaki
           ATCC 30864]
          Length = 669

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 79/131 (60%), Gaps = 2/131 (1%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN    L+  L  N IGDE A+ IA+ALK N T+T + LGGN I   GA AIA  LK N
Sbjct: 12  VKNASGTLY--LSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVN 69

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +T L L+ N IG  GA+A++EVLK +  +  L L   QIG  GA  +A+ L+ N T++
Sbjct: 70  KTVTLLSLSENQIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLT 129

Query: 503 ILDLRANGLRD 513
            LDL  N + D
Sbjct: 130 YLDLHQNLIGD 140



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 3/172 (1%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +  N I  + A  +AE +K   +L  + L  N IGD GA  IA+ALK N+T+T + L
Sbjct: 18  TLYLSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSL 77

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   GA AIA VLK N+++  L+L  N IG  GA A++E LK +  +  L L    
Sbjct: 78  SENQIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNL 137

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKH 534
           IG +GA   A  L+ N T+  L+L  N L +   +G N L    +AI  L H
Sbjct: 138 IGDAGARANAQALKVNKTLKTLNLSQNFLTN---TGINALKQIDNAICKLDH 186



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 86/154 (55%), Gaps = 1/154 (0%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL LS N IGDE  K + + L  N  +  L L    + D GA+AIAE LK N  + +L L
Sbjct: 18  TLYLSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSL 77

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I   G  ++AE L  N+ ++ L+LN N  G +GA+A+A+ L+ NK+L  L LH N 
Sbjct: 78  SENQIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNL 137

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           IGD G RA    L   K  L  L++  N ++  G
Sbjct: 138 IGDAGARANAQALKVNK-TLKTLNLSQNFLTNTG 170



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 82/143 (57%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  L  L L GN IGD G + + + L  N  V  L LS   + D GA+AIA
Sbjct: 32  KAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSLSENQIGDVGAQAIA 91

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+LK N++L+ L LN N I   G  ++AEAL  N T+  L L+ N  G  GA A A+ L+
Sbjct: 92  EVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNLIGDAGARANAQALK 151

Query: 328 GNKSLRELHLHGNSIGDEGIRAL 350
            NK+L+ L+L  N + + GI AL
Sbjct: 152 VNKTLKTLNLSQNFLTNTGINAL 174



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 96/192 (50%), Gaps = 35/192 (18%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T+ L  N I  + A AIA  LK N+ +T L L  N IG  GA+A++E LK +  +  L L
Sbjct: 18  TLYLSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSL 77

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFY 538
              QIG  GA+ +A++L+ N  +  L+L  N + D                         
Sbjct: 78  SENQIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDV------------------------ 113

Query: 539 SLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
                   GA  +A++ KV N+ LT +DL  N I D GA A AQALK N+   + +LNL+
Sbjct: 114 --------GAHAIAEALKV-NKTLTYLDLHQNLIGDAGARANAQALKVNK--TLKTLNLS 162

Query: 599 NNFLTKFGQSAL 610
            NFLT  G +AL
Sbjct: 163 QNFLTNTGINAL 174



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 85/156 (54%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GDE    +AE+L  N T   +    N I  AG +A    L+ N  +  L+LS N
Sbjct: 21  LSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSLSEN 80

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + ++L  N  ++ L L+   + D GA AIAE LK N  L  L+L+ N+I  
Sbjct: 81  QIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNLIGD 140

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           +G  + A+AL  N T+++L+L+ N+    G NAL +
Sbjct: 141 AGARANAQALKVNKTLKTLNLSQNFLTNTGINALKQ 176



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 2/143 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G   GD G   +AE+L  N+T   +S + N I   G +A   VL+ N  LK LNL+ N
Sbjct: 49  LGGNQIGDAGARAIAEALKVNKTVTLLSLSENQIGDVGAQAIAEVLKVNTMLKDLNLNKN 108

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G   + + L  N  +  L L    + D GA+A A+ LK N  L+ L L+ N +  
Sbjct: 109 QIGDVGAHAIAEALKVNKTLTYLDLHQNLIGDAGARANAQALKVNKTLKTLNLSQNFLTN 168

Query: 289 SGFTSLAEALLENSTIRSLHLNG 311
           +G  +L +  ++N+  +  H +G
Sbjct: 169 TGINALKQ--IDNAICKLDHSSG 189



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K       ++++    GD G   +AE+L  N+T   +    N I  AG +A  
Sbjct: 88  QAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNLIGDAGARANA 147

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
             L+ N  LKTLNLS N + + G+  L  I  DNA + +L  SS  L  + A + AEL
Sbjct: 148 QALKVNKTLKTLNLSQNFLTNTGINALKQI--DNA-ICKLDHSSGRLDHQRAPSPAEL 202



 Score = 39.3 bits (90), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           AK +A++ KV N  LT + L  N+I D GA AIA+ALK N+   VT L+L+ N +   G 
Sbjct: 31  AKAIAEALKV-NTTLTHLFLGGNQIGDAGARAIAEALKVNK--TVTLLSLSENQIGDVGA 87

Query: 608 SALTD 612
            A+ +
Sbjct: 88  QAIAE 92


>gi|270159735|ref|ZP_06188391.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|269988074|gb|EEZ94329.1| conserved hypothetical protein [Legionella longbeachae D-4968]
          Length = 926

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            L  +L +N   + +S   N I  A       +L+SN  LK ++LS   I + G+  +  
Sbjct: 82  LLTAALSHNTYLKSLSLRDNYIGNAEAPYIASLLKSNSTLKEIDLSYTAIDEIGINTIAI 141

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L +N  +++L L    +R         L  + SI    ELN        +T L E L E
Sbjct: 142 ALQENRSLKKLDLEGCYIRGITNYLFHILSTHESIQ---ELNFRDCSLQFYTGLTELLSE 198

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG---IRALMSGLSSR 357
           ++++++L+L+ N  G+     L +GL+ NK L +L L    +       ++AL   L+  
Sbjct: 199 STSLKNLNLSKNDLGSYNLEYLTEGLQNNKKLMKLDLSSCGLDTSAPGRLQALAEALNGH 258

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L  L++ +N ++A+      E IKN  S+ ++NL  N +GDE    +A+A+  N ++
Sbjct: 259 PS-LNYLNLSSNGLNAEAYPLATEIIKNNFSIRYLNLTANHMGDEAFHNLANAIPNNNSL 317

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           TT+ L  N I +KG   ++  L+ N+ +  LDL  N    D  ++L + L+ +  I ++ 
Sbjct: 318 TTLVLRKNRISNKGLKHLSEALQQNNTLVHLDLTENDF--DSVQSLCDCLQHNIGITSID 375

Query: 478 LGWCQIGASGAEFVADMLRYNNTI 501
               +I  +    +  +L+ N  I
Sbjct: 376 FDKDKITDNSCVEIEQLLKRNQRI 399



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 175/403 (43%), Gaps = 72/403 (17%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           ++ A IK     L  N  LK+L+L  N IG+                             
Sbjct: 75  VSGAFIKLLTAALSHNTYLKSLSLRDNYIGNAE--------------------------- 107

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A  IA LLK+NS L+ ++L+   ID  G  ++A AL EN +++ L L G Y   +  N 
Sbjct: 108 -APYIASLLKSNSTLKEIDLSYTAIDEIGINTIAIALQENRSLKKLDLEGCYIRGI-TNY 165

Query: 322 LAKGLEGNKSLRELHLHGNSIG-DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           L   L  ++S++EL+    S+    G+  L+S  +S K     L++  N + +    ++ 
Sbjct: 166 LFHILSTHESIQELNFRDCSLQFYTGLTELLSESTSLKN----LNLSKNDLGSYNLEYLT 221

Query: 381 EYIKNCKSLLWINLYMNDIGDEGA---EKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           E ++N K L+ ++L    +        + +A+AL  + ++  ++L  N ++++       
Sbjct: 222 EGLQNNKKLMKLDLSSCGLDTSAPGRLQALAEALNGHPSLNYLNLSSNGLNAEAYPLATE 281

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           ++K+N  I  L+L  N +G +    L+  +  + ++ TL L   +I   G + +++ L+ 
Sbjct: 282 IIKNNFSIRYLNLTANHMGDEAFHNLANAIPNNNSLTTLVLRKNRISNKGLKHLSEALQQ 341

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV 557
           NNT+  LDL  N   D V S C+                             CL      
Sbjct: 342 NNTLVHLDLTENDF-DSVQSLCD-----------------------------CLQH---- 367

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
            N  +TSID   ++I D+    I Q LK N+ +  + L +  N
Sbjct: 368 -NIGITSIDFDKDKITDNSCVEIEQLLKRNQRIKNSYLIILKN 409



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++  + GDE    LA ++  N +   +    N I+  G+K     LQ N  L  L+L+
Sbjct: 292 LNLTANHMGDEAFHNLANAIPNNNSLTTLVLRKNRISNKGLKHLSEALQQNNTLVHLDLT 351

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
            N    + V+ LCD L  N G+  +      + D     I +LLK N  ++
Sbjct: 352 ENDF--DSVQSLCDCLQHNIGITSIDFDKDKITDNSCVEIEQLLKRNQRIK 400


>gi|399498112|emb|CCG20384.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALGKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALGKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALGKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALGKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  L          KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALG---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|33563305|ref|NP_766317.1| nucleotide-binding oligomerization domain-containing protein 1 [Mus
           musculus]
 gi|283806725|ref|NP_001164478.1| nucleotide-binding oligomerization domain-containing protein 1 [Mus
           musculus]
 gi|29427688|sp|Q8BHB0.1|NOD1_MOUSE RecName: Full=Nucleotide-binding oligomerization domain-containing
           protein 1; AltName: Full=Caspase recruitment
           domain-containing protein 4
 gi|26354627|dbj|BAC40940.1| unnamed protein product [Mus musculus]
 gi|27503683|gb|AAH42670.1| Nucleotide-binding oligomerization domain containing 1 [Mus
           musculus]
 gi|37196420|gb|AAN52479.1| NOD1 [Mus musculus]
 gi|74215756|dbj|BAE23420.1| unnamed protein product [Mus musculus]
 gi|148666297|gb|EDK98713.1| caspase recruitment domain 4 [Mus musculus]
          Length = 953

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 1/213 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K + E L    I+  L L NN I   G   +A+ L E   ++ L L 
Sbjct: 733 IRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLG 792

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   +A  ++ + S+ ++ + GN IGDEG +A    L      L  L +  N 
Sbjct: 793 KNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPS-LTTLSLAFNG 851

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS +G   +A+ +K   +L  I L  N++ DE AE  A+ L+ N+T+  + L  N I +K
Sbjct: 852 ISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRITAK 911

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           G + +AR L+ N+ IT + L  N I  + AK  
Sbjct: 912 GTAQLARALQKNTAITEICLNGNLIKPEEAKVF 944



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 1/175 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  +  L + NN I+  GA +VA+ +  C+ L  + L
Sbjct: 733 IRLSVNQITDTGVKVLCEELTKYK-IVTFLGLYNNQITDIGARYVAQILDECRGLKHLKL 791

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K + +I  + + GN I  +GA A A  LKD+  +T+L LA+N 
Sbjct: 792 GKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNG 851

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           I  +G K+L++ LK +  +  + L   ++    AE  A+MLR N T+  L L  N
Sbjct: 852 ISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQN 906



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 112/213 (52%), Gaps = 1/213 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  + L+ N     G   L + L   K +  L L+ N I D G R +   L   +G L
Sbjct: 728 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRG-L 786

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G   VA  +KN  S++ + ++ N IGDEGA+  A+ALK + ++TT+ 
Sbjct: 787 KHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLS 846

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I  +G  ++A+ LK N+ +T + L  N +  + A+  +E+L+ +  +  L L   
Sbjct: 847 LAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQN 906

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +I A G   +A  L+ N  I+ + L  N ++ E
Sbjct: 907 RITAKGTAQLARALQKNTAITEICLNGNLIKPE 939



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 39/257 (15%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 719 GVQELQPCFS----RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +  + LG N I S+G   +A  +K+++ I  + +  N IG +GAKA +E
Sbjct: 775 YVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            LK H ++ TL L +  I   G + +A  L+ N T++++ L  N L DE           
Sbjct: 835 ALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDE----------- 883

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+C A+  + VN+ L  + L  N I   G   +A+AL+
Sbjct: 884 ---------------------SAECFAEMLR-VNQTLRHLWLIQNRITAKGTAQLARALQ 921

Query: 586 ANEDVAVTSLNLANNFL 602
            N   A+T + L  N +
Sbjct: 922 KN--TAITEICLNGNLI 936



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 87/170 (51%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A+ L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 770 DIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L D+  +  L L+   +  EG K++A+ LK N+ L V+ L  N ++       A
Sbjct: 830 KAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T+R L L  N   A G   LA+ L+ N ++ E+ L+GN I  E
Sbjct: 890 EMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPE 939



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 86/192 (44%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L E L   +    +    N IT  G +    +L     LK L
Sbjct: 730 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHL 789

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KC+   + ++  +  + +    + DEGAKA AE LK++  L  L L  
Sbjct: 790 KLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAF 849

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  SLA+AL +N+T+  + L  N      A   A+ L  N++LR L L  N I 
Sbjct: 850 NGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRIT 909

Query: 344 DEGIRALMSGLS 355
            +G   L   L 
Sbjct: 910 AKGTAQLARALQ 921



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 74/153 (48%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E R    + +       EG   +A ++  + +  +V    N I   G KAF   L+ + +
Sbjct: 782 ECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +  + L+  +L DE A+  AE+L+ N  LR L
Sbjct: 842 LTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA AL +N+ I  + LNGN
Sbjct: 902 WLIQNRITAKGTAQLARALQKNTAITEICLNGN 934



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K L E L  +  +  L L   QI   GA +VA +L       
Sbjct: 728 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KC+A + K  + ++
Sbjct: 781 ----------DE-CRGLKHLKLGKNRITS--------------EGGKCVALAVKN-STSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             + +  N+I D+GA A A+ALK  +  ++T+L+LA N ++  G  +L  A
Sbjct: 815 VDVGMWGNQIGDEGAKAFAEALK--DHPSLTTLSLAFNGISPEGGKSLAQA 863


>gi|260799079|ref|XP_002594527.1| hypothetical protein BRAFLDRAFT_124994 [Branchiostoma floridae]
 gi|229279761|gb|EEN50538.1| hypothetical protein BRAFLDRAFT_124994 [Branchiostoma floridae]
          Length = 578

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 134/263 (50%), Gaps = 7/263 (2%)

Query: 211 DGVLQSNIALKTLN-----LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           DGV+ +   +K L      +  + +G+ G + L   L  N  +  L L    L  EGA A
Sbjct: 148 DGVVPATYLMKHLGDEHLVMRHHYLGERGWRPLAMALRKNVCIRHLDLVDNHLGVEGAVA 207

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IA  +K++  +  + L+ N + + G +++A  L  NS +++L L  N  G   A   A+ 
Sbjct: 208 IASAVKDSPYISEMNLSENFLGHGG-SAIASMLETNSDLKTLILRANQLGDHEAKTFAEA 266

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N ++  L L  N  G+ G   L +G+ + +G L  L++  N +  KG   +A  IK 
Sbjct: 267 LKRNITMTTLDLSQNQFGELGGIFLGAGIGANEG-LNCLNLSWNHLRLKGGVAIAMGIKV 325

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            +SL  ++L  N +GD GA     AL+ N+T+  +DL  N I  +GA  ++  L  N  +
Sbjct: 326 NQSLEVLDLSWNGLGDLGATAFGKALRFNKTLRMLDLSNNRITVEGAKKLSLGLAKNEGL 385

Query: 446 TSLDLAYNPIGADGAKALSEVLK 468
            +L L  N IG +G KAL +VL+
Sbjct: 386 ETLMLGTNAIGDEGVKALLKVLE 408



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 6/235 (2%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           NF   G   +A  L  N   + +   AN +     K F   L+ NI + TL+LS N  G+
Sbjct: 226 NFLGHGGSAIASMLETNSDLKTLILRANQLGDHEAKTFAEALKRNITMTTLDLSQNQFGE 285

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G   L   +  N G+  L LS   LR +G  AIA  +K N  L VL+L+ N +   G T
Sbjct: 286 LGGIFLGAGIGANEGLNCLNLSWNHLRLKGGVAIAMGIKVNQSLEVLDLSWNGLGDLGAT 345

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +  +AL  N T+R L L+ N     GA  L+ GL  N+ L  L L  N+IGDEG++AL+ 
Sbjct: 346 AFGKALRFNKTLRMLDLSNNRITVEGAKKLSLGLAKNEGLETLMLGTNAIGDEGVKALLK 405

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            L  +   L VL + + +++ +    V + I+  + +  I +    +G  G EKI
Sbjct: 406 VLEKKNTTLKVLGLQDITVTKE----VYKSIRELEDIRGIQIIHAGLG--GYEKI 454



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 12/215 (5%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G+ G   +A AL++N  I  +DL  N++  +GA AIA  +KD+  I+ ++L+ N +G  
Sbjct: 172 LGERGWRPLAMALRKNVCIRHLDLVDNHLGVEGAVAIASAVKDSPYISEMNLSENFLGH- 230

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           G  A++ +L+ + ++ TL L   Q+G   A+  A+ L+ N T++ LDL  N        G
Sbjct: 231 GGSAIASMLETNSDLKTLILRANQLGDHEAKTFAEALKRNITMTTLDLSQNQF------G 284

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
             G  F  + I + + +   +L  N+L  +G   +A   KV N++L  +DL++N + D G
Sbjct: 285 ELGGIFLGAGIGANEGLNCLNLSWNHLRLKGGVAIAMGIKV-NQSLEVLDLSWNGLGDLG 343

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
           A A  +AL+ N+ + +  L+L+NN +T  G   L+
Sbjct: 344 ATAFGKALRFNKTLRM--LDLSNNRITVEGAKKLS 376



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 142/305 (46%), Gaps = 18/305 (5%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGNNSISA 373
           G + A  L K L G++ L   H   + +G+ G R L   L  RK   +  LD+ +N +  
Sbjct: 149 GVVPATYLMKHL-GDEHLVMRH---HYLGERGWRPLAMAL--RKNVCIRHLDLVDNHLGV 202

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +GA  +A  +K+   +  +NL  N +G  G   IA  L+ N  + T+ L  N +    A 
Sbjct: 203 EGAVAIASAVKDSPYISEMNLSENFLG-HGGSAIASMLETNSDLKTLILRANQLGDHEAK 261

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A  LK N  +T+LDL+ N  G  G   L   +  +  +N L L W  +   G   +A 
Sbjct: 262 TFAEALKRNITMTTLDLSQNQFGELGGIFLGAGIGANEGLNCLNLSWNHLRLKGGVAIAM 321

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCL 551
            ++ N ++ +LDL  NGL      G  G + F  A+   K +    L  N +  +GAK L
Sbjct: 322 GIKVNQSLEVLDLSWNGL------GDLGATAFGKALRFNKTLRMLDLSNNRITVEGAKKL 375

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
           +      NE L ++ L  N I D+G  A+ + L+  ++  +  L L +  +TK    ++ 
Sbjct: 376 SLGL-AKNEGLETLMLGTNAIGDEGVKALLKVLE-KKNTTLKVLGLQDITVTKEVYKSIR 433

Query: 612 DAKDL 616
           + +D+
Sbjct: 434 ELEDI 438


>gi|289165493|ref|YP_003455631.1| hypothetical protein LLO_2165 [Legionella longbeachae NSW150]
 gi|288858666|emb|CBJ12563.1| Hypothetical protein, LRR and tropomodulin domains [Legionella
           longbeachae NSW150]
          Length = 926

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            L  +L +N   + +S   N I  A       +L+SN  LK ++LS   I + G+  +  
Sbjct: 82  LLTAALSHNTYLKSLSLRDNYIGNAEAPYIASLLKSNSTLKEIDLSYTAIDEIGINTIAI 141

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L +N  +++L L    +R         L  + SI    ELN        +T L E L E
Sbjct: 142 ALQENRSLKKLDLEGCYIRGITNYLFHILSTHESIQ---ELNFRDCSLQFYTGLTELLSE 198

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG---IRALMSGLSSR 357
           ++++++L+L+ N  G+     L +GL+ NK L +L L    +       ++AL   L+  
Sbjct: 199 STSLKNLNLSKNDLGSYNLEYLTEGLQNNKKLMKLDLSSCGLDTSAPGRLQALAEALNGH 258

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L  L++ +N ++A+      E IKN  S+ ++NL  N +GDE    +A+A+  N ++
Sbjct: 259 PS-LNYLNLSSNGLNAEAYPLATEIIKNNFSIRYLNLTANHMGDEAFHNLANAIPNNNSL 317

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           TT+ L  N I +KG   ++  L+ N+ +  LDL  N    D  ++L + L+ +  I ++ 
Sbjct: 318 TTLVLRKNRISNKGLKHLSEALQQNNTLVHLDLTENDF--DSVQSLCDCLQHNIGITSID 375

Query: 478 LGWCQIGASGAEFVADMLRYNNTI 501
               +I  +    +  +L+ N  I
Sbjct: 376 FDKDKITDNSCVEIEQLLKRNQRI 399



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 175/403 (43%), Gaps = 72/403 (17%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           ++ A IK     L  N  LK+L+L  N IG+                             
Sbjct: 75  VSGAFIKLLTAALSHNTYLKSLSLRDNYIGNAE--------------------------- 107

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A  IA LLK+NS L+ ++L+   ID  G  ++A AL EN +++ L L G Y   +  N 
Sbjct: 108 -APYIASLLKSNSTLKEIDLSYTAIDEIGINTIAIALQENRSLKKLDLEGCYIRGI-TNY 165

Query: 322 LAKGLEGNKSLRELHLHGNSIG-DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           L   L  ++S++EL+    S+    G+  L+S  +S K     L++  N + +    ++ 
Sbjct: 166 LFHILSTHESIQELNFRDCSLQFYTGLTELLSESTSLKN----LNLSKNDLGSYNLEYLT 221

Query: 381 EYIKNCKSLLWINLYMNDIGDEGA---EKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           E ++N K L+ ++L    +        + +A+AL  + ++  ++L  N ++++       
Sbjct: 222 EGLQNNKKLMKLDLSSCGLDTSAPGRLQALAEALNGHPSLNYLNLSSNGLNAEAYPLATE 281

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           ++K+N  I  L+L  N +G +    L+  +  + ++ TL L   +I   G + +++ L+ 
Sbjct: 282 IIKNNFSIRYLNLTANHMGDEAFHNLANAIPNNNSLTTLVLRKNRISNKGLKHLSEALQQ 341

Query: 498 NNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV 557
           NNT+  LDL  N   D V S C+                             CL      
Sbjct: 342 NNTLVHLDLTENDF-DSVQSLCD-----------------------------CLQH---- 367

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
            N  +TSID   ++I D+    I Q LK N+ +  + L +  N
Sbjct: 368 -NIGITSIDFDKDKITDNSCVEIEQLLKRNQRIKNSYLIILKN 409



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++  + GDE    LA ++  N +   +    N I+  G+K     LQ N  L  L+L+
Sbjct: 292 LNLTANHMGDEAFHNLANAIPNNNSLTTLVLRKNRISNKGLKHLSEALQQNNTLVHLDLT 351

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
            N    + V+ LCD L  N G+  +      + D     I +LLK N  ++
Sbjct: 352 ENDF--DSVQSLCDCLQHNIGITSIDFDKDKITDNSCVEIEQLLKRNQRIK 400


>gi|330790197|ref|XP_003283184.1| hypothetical protein DICPUDRAFT_18720 [Dictyostelium purpureum]
 gi|325086865|gb|EGC40248.1| hypothetical protein DICPUDRAFT_18720 [Dictyostelium purpureum]
          Length = 339

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 144/289 (49%), Gaps = 16/289 (5%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +   +L    S+++S  +   EGL  L E L  N++  +++ + NGI   G +   
Sbjct: 45  QLIKDLLPQLPQLQSINLSNISLCTEGLRMLLEYLRQNKSIRKINLSNNGIYPNGAEDIA 104

Query: 212 GVL-QSNIALKTLNLSGNPIGDEGVKCLCDILV-------DNAGVERLQLSSVDLRDEGA 263
            +L ++N ++++L+LS N I   G++ + + L          + ++ L L  + +  E +
Sbjct: 105 NILLKNNYSIESLDLSENRISLIGLRSILNALAPTDPLCKSESSLKSLYLRRMMISFEES 164

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
             I  ++     L+ L+ ++N I+      + EAL  N+TI+ L+L+ N  G  G   +A
Sbjct: 165 TLIRNMIFQTLHLKTLDFSSNQINRESLAIICEALSVNNTIQDLNLSFNIFGPQGCAEIA 224

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           K L  NKS+  LHLH   +  EG + L   L +    L  L++ NN I A G  H  + +
Sbjct: 225 KTLTQNKSISSLHLHCVGMKKEGAQVLAESLKNNHS-LTRLNLSNNEIKASGCNHFIKLL 283

Query: 384 KNCKSLLWINLYMNDIGDEGA--EKIADALKQNRTITTIDLGGNNIHSK 430
           K+  S+ +++L  N I ++ +  + +   +      T IDL GN+I+ K
Sbjct: 284 KSNHSIHYMDLSCNSIKNKSSLYQDLCKIIN-----TKIDLNGNSINQK 327



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 12/293 (4%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG + ++ + D+L     ++ + LS++ L  EG + + E L+ N  +R + L+NN I  +
Sbjct: 39  IGLDCIQLIKDLLPQLPQLQSINLSNISLCTEGLRMLLEYLRQNKSIRKINLSNNGIYPN 98

Query: 290 GFTSLAEALLENS-TIRSLHLNGNYGGALGANALAKGL-------EGNKSLRELHLHGNS 341
           G   +A  LL+N+ +I SL L+ N    +G  ++   L       +   SL+ L+L    
Sbjct: 99  GAEDIANILLKNNYSIESLDLSENRISLIGLRSILNALAPTDPLCKSESSLKSLYLRRMM 158

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I  E    L+  +  +   L  LD  +N I+ +    + E +    ++  +NL  N  G 
Sbjct: 159 ISFEE-STLIRNMIFQTLHLKTLDFSSNQINRESLAIICEALSVNNTIQDLNLSFNIFGP 217

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G  +IA  L QN++I+++ L    +  +GA  +A  LK+N  +T L+L+ N I A G  
Sbjct: 218 QGCAEIAKTLTQNKSISSLHLHCVGMKKEGAQVLAESLKNNHSLTRLNLSNNEIKASGCN 277

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
              ++LK + +I+ + L  C    + +    D+ +  NT   +DL  N +  +
Sbjct: 278 HFIKLLKSNHSIHYMDLS-CNSIKNKSSLYQDLCKIINT--KIDLNGNSINQK 327



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 14/262 (5%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG + I+ L+  L  +  +L  +++ N S+  +G   + EY++  KS+  INL  N I  
Sbjct: 39  IGLDCIQ-LIKDLLPQLPQLQSINLSNISLCTEGLRMLLEYLRQNKSIRKINLSNNGIYP 97

Query: 402 EGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL-------KDNSVITSLDLAYN 453
            GAE IA+ L K N +I ++DL  N I   G  +I   L       K  S + SL L   
Sbjct: 98  NGAEDIANILLKNNYSIESLDLSENRISLIGLRSILNALAPTDPLCKSESSLKSLYLRRM 157

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            I  + +  +  ++    ++ TL     QI       + + L  NNTI  L+L  N    
Sbjct: 158 MISFEESTLIRNMIFQTLHLKTLDFSSNQINRESLAIICEALSVNNTIQDLNLSFNIFGP 217

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           + C+        + +I SL H+    +     +GA+ LA+S K  N +LT ++L+ NEI+
Sbjct: 218 QGCAEIAKTLTQNKSISSL-HLHCVGM---KKEGAQVLAESLKN-NHSLTRLNLSNNEIK 272

Query: 574 DDGAFAIAQALKANEDVAVTSL 595
             G     + LK+N  +    L
Sbjct: 273 ASGCNHFIKLLKSNHSIHYMDL 294


>gi|320166995|gb|EFW43894.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 643

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 1/151 (0%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+A+A  LK N +L  L L  + I   G  ++AE L  N+T+  LHL  N  G  GA
Sbjct: 3   DAGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDAGA 62

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ NKSL  LHL  N IGD G+RAL   L      L  L + NN I   GA  +
Sbjct: 63  RAIAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNT-TLKRLALQNNQIGDAGAQAL 121

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           AE +    +L  + +Y+N IGD GA+ IAD+
Sbjct: 122 AEALTVNTTLTELCMYLNQIGDAGAQAIADS 152



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 85/156 (54%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L+ N  L+ L L  + IGD+G + + + L  N  +  L L    + D GA+
Sbjct: 4   AGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDAGAR 63

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N  L +L L  N I  +G  +LAEAL  N+T++ L L  N  G  GA ALA+
Sbjct: 64  AIAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNTTLKRLALQNNQIGDAGAQALAE 123

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
            L  N +L EL ++ N IGD G +A+     + + +
Sbjct: 124 ALTVNTTLTELCMYLNQIGDAGAQAIADSWPTPESR 159



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 29/179 (16%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A  L+ N  L EL L  + IGD+G RA                         
Sbjct: 2   GDAGAQAVANALKYNPLLEELFLQFHKIGDDGARA------------------------- 36

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
               +AE +K   +L  ++L  N IGD GA  IA+ALK N+++  + L  N I   G  A
Sbjct: 37  ----IAETLKVNTTLTMLHLGENLIGDAGARAIAEALKVNKSLIILHLPENQIGDAGVRA 92

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           +A  LK N+ +  L L  N IG  GA+AL+E L  +  +  L +   QIG +GA+ +AD
Sbjct: 93  LAEALKVNTTLKRLALQNNQIGDAGAQALAEALTVNTTLTELCMYLNQIGDAGAQAIAD 151



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 76/139 (54%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  VA  +K    L  + L  + IGD+GA  IA+ LK N T+T + LG N I   GA A
Sbjct: 5   GAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDAGARA 64

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N  +  L L  N IG  G +AL+E LK +  +  L L   QIG +GA+ +A+ 
Sbjct: 65  IAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNTTLKRLALQNNQIGDAGAQALAEA 124

Query: 495 LRYNNTISILDLRANGLRD 513
           L  N T++ L +  N + D
Sbjct: 125 LTVNTTLTELCMYLNQIGD 143



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 86/179 (48%), Gaps = 9/179 (5%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +A +L YN   EE+    + I   G +A    L+ N  L  L+L  N IGD 
Sbjct: 1   MGDAGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDA 60

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  L L    + D G +A+AE LK N+ L+ L L NN I  +G  +
Sbjct: 61  GARAIAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNTTLKRLALQNNQIGDAGAQA 120

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALA--------KGLEGNKSLRELH-LHGNSIG 343
           LAEAL  N+T+  L +  N  G  GA A+A        +G     S+   H LH N  G
Sbjct: 121 LAEALTVNTTLTELCMYLNQIGDAGAQAIADSWPTPESRGFRQWSSIEMTHMLHVNIFG 179



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 33/190 (17%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD GA+ +A+ALK N  +  + L  + I   GA AIA  LK N+ +T L L  N IG  
Sbjct: 1   MGDAGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDA 60

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A++E LK + ++  L L   QIG +G   +A+ L+ N T+  L L+ N + D     
Sbjct: 61  GARAIAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNTTLKRLALQNNQIGDA---- 116

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                       GA+ LA++   VN  LT + +  N+I D GA 
Sbjct: 117 ----------------------------GAQALAEAL-TVNTTLTELCMYLNQIGDAGAQ 147

Query: 579 AIAQALKANE 588
           AIA +    E
Sbjct: 148 AIADSWPTPE 157



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 35/159 (22%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G  GA+A++  LK++  +  L L + +IG  GA  +A+ L+ N T+++L L  N + D 
Sbjct: 1   MGDAGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDA 60

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                           GA+ +A++ KV N++L  + L  N+I D
Sbjct: 61  --------------------------------GARAIAEALKV-NKSLIILHLPENQIGD 87

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            G  A+A+ALK N    +  L L NN +   G  AL +A
Sbjct: 88  AGVRALAEALKVN--TTLKRLALQNNQIGDAGAQALAEA 124


>gi|301626026|ref|XP_002942200.1| PREDICTED: t-complex-associated testis-expressed protein 1-like
           [Xenopus (Silurana) tropicalis]
          Length = 460

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 103/196 (52%), Gaps = 2/196 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK   L  + + D+    L   L+++  +  L LS   + D GA+AIA+LLK  S LRVL
Sbjct: 252 LKVFRLHKSKVDDDKACVLVRSLLNHPALVHLDLSHNQVSDRGARAIAKLLK-ESALRVL 310

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L+NN +   G  +LA AL  N T+R+L L  N+ G  G  AL   L  N++L+ELHL  
Sbjct: 311 DLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVGNEGGQALCNALLPNQTLQELHLGS 370

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N + +    AL   L +  G L  L +  N I   G   + E + + ++LL ++L + +I
Sbjct: 371 NELSEPTASALSQAL-THNGSLRRLSLACNRIGPDGGKQLLEGMSDNETLLELDLRLTEI 429

Query: 400 GDEGAEKIADALKQNR 415
           G E    I   LK NR
Sbjct: 430 GQESEFFINQVLKNNR 445



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 2/206 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           SLA+AL     ++   L+ +      A  L + L  + +L  L L  N + D G RA+  
Sbjct: 241 SLAQALRVFRNLKVFRLHKSKVDDDKACVLVRSLLNHPALVHLDLSHNQVSDRGARAIAK 300

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L  ++  L VLD+ NN++ A GA  +A  + N  +L  ++L +N +G+EG + + +AL 
Sbjct: 301 LL--KESALRVLDLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVGNEGGQALCNALL 358

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N+T+  + LG N +    ASA+++ L  N  +  L LA N IG DG K L E +  +  
Sbjct: 359 PNQTLQELHLGSNELSEPTASALSQALTHNGSLRRLSLACNRIGPDGGKQLLEGMSDNET 418

Query: 473 INTLKLGWCQIGASGAEFVADMLRYN 498
           +  L L   +IG     F+  +L+ N
Sbjct: 419 LLELDLRLTEIGQESEFFINQVLKNN 444



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 2/172 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L ++ AL  L+LS N + D G + +  +L ++A +  L LS+ ++   GA+A+A  L NN
Sbjct: 274 LLNHPALVHLDLSHNQVSDRGARAIAKLLKESA-LRVLDLSNNNVGAHGAQALAHALTNN 332

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             LR L L  N +   G  +L  ALL N T++ LHL  N      A+AL++ L  N SLR
Sbjct: 333 WTLRNLSLRLNHVGNEGGQALCNALLPNQTLQELHLGSNELSEPTASALSQALTHNGSLR 392

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            L L  N IG +G + L+ G+S  +  L  LD+    I  +  F + + +KN
Sbjct: 393 RLSLACNRIGPDGGKQLLEGMSDNE-TLLELDLRLTEIGQESEFFINQVLKN 443



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 2/189 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            N+LA+ L   ++L+   LH + + D+    L+  L +    L  LD+ +N +S +GA  
Sbjct: 239 CNSLAQALRVFRNLKVFRLHKSKVDDDKACVLVRSLLNHPA-LVHLDLSHNQVSDRGARA 297

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ +K   +L  ++L  N++G  GA+ +A AL  N T+  + L  N++ ++G  A+   
Sbjct: 298 IAKLLKE-SALRVLDLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVGNEGGQALCNA 356

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N  +  L L  N +    A ALS+ L  +G++  L L   +IG  G + + + +  N
Sbjct: 357 LLPNQTLQELHLGSNELSEPTASALSQALTHNGSLRRLSLACNRIGPDGGKQLLEGMSDN 416

Query: 499 NTISILDLR 507
            T+  LDLR
Sbjct: 417 ETLLELDLR 425



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 10/215 (4%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ ++  ++L    L+ + + D+ A  +  +L  +  +  +DL  N +  +GA AIA++
Sbjct: 242 LAQALRVFRNLKVFRLHKSKVDDDKACVLVRSLLNHPALVHLDLSHNQVSDRGARAIAKL 301

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK+ S +  LDL+ N +GA GA+AL+  L  +  +  L L    +G  G + + + L  N
Sbjct: 302 LKE-SALRVLDLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVGNEGGQALCNALLPN 360

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            T+  L L +N L +   S  +  +  H+   SL+ +   SL  N +   G K L +   
Sbjct: 361 QTLQELHLGSNELSEPTASALSQ-ALTHNG--SLRRL---SLACNRIGPDGGKQLLEGMS 414

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
             NE L  +DL   EI  +  F I Q LK N + A
Sbjct: 415 -DNETLLELDLRLTEIGQESEFFINQVLKNNRERA 448



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 30/198 (15%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESL-----------G 187
           F   LFR + +  N  A+ LR F ++    +      D+    L  SL            
Sbjct: 227 FEWNLFRFTDRDCNSLAQALRVFRNLKVFRLHKSKVDDDKACVLVRSLLNHPALVHLDLS 286

Query: 188 YNQTAEE----------------VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           +NQ ++                 +  + N + A G +A    L +N  L+ L+L  N +G
Sbjct: 287 HNQVSDRGARAIAKLLKESALRVLDLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVG 346

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           +EG + LC+ L+ N  ++ L L S +L +  A A+++ L +N  LR L L  N I   G 
Sbjct: 347 NEGGQALCNALLPNQTLQELHLGSNELSEPTASALSQALTHNGSLRRLSLACNRIGPDGG 406

Query: 292 TSLAEALLENSTIRSLHL 309
             L E + +N T+  L L
Sbjct: 407 KQLLEGMSDNETLLELDL 424



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G+EG   L  +L  NQT +E+   +N ++     A    L  N +L+ L+L+ N IG 
Sbjct: 344 HVGNEGGQALCNALLPNQTLQELHLGSNELSEPTASALSQALTHNGSLRRLSLACNRIGP 403

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +G K L + + DN  +  L L   ++  E    I ++LKNN
Sbjct: 404 DGGKQLLEGMSDNETLLELDLRLTEIGQESEFFINQVLKNN 444


>gi|145520627|ref|XP_001446169.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413646|emb|CAK78772.1| unnamed protein product [Paramecium tetraurelia]
          Length = 763

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 175/383 (45%), Gaps = 20/383 (5%)

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N +G E  K + DIL+ N     L+L+   + DEG   + E+LK N+ +  L+L++N + 
Sbjct: 183 NQLGLESAKTIRDILLYNNHFSTLRLARNSIGDEGLVELLEMLKVNNNIVHLDLSSNNLT 242

Query: 288 YSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             G   L   L+   +I S+ L      N N     G   +   L+ N  L+ L L G S
Sbjct: 243 ADGAFYLFNELVPLHSIISIELSSKDGLNRNKVSVKGCEPIETILKYNHPLQFLGLRGTS 302

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G   ++SGL +    L  L++ NN ++ +   ++ +YI  C +L+ ++L  N +G+
Sbjct: 303 IQNAGFECILSGLQT-NNTLTYLNVSNNDLNEEACNYMVQYISVC-NLVELDLSYNPLGN 360

Query: 402 EGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G + ++    K +  +  ++L G  I S G     + L  N  +  L L  N    +G 
Sbjct: 361 NGMDYLSRIFDKGSFMLKKLNLAGCEIKSLGILKFFQSLSVNRFLEKLILDENHFSGNGV 420

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
             +  VL     +  L +  C I A+GAEF+ + +  N T+  L LR N L D V + C 
Sbjct: 421 NEIENVLTSRIPLAYLSMAKCSINATGAEFIGNGVERNRTLKTLILRDNRLTD-VGAECI 479

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
               F   +  LK       C+  L     + QS +     LT++ L  N   D     I
Sbjct: 480 FKGLFFEKL-DLKRCNLTDKCV--LGLCSMIKQSTQ-----LTTLLLPDNGFHDSSGIVI 531

Query: 581 AQALKANEDVAVTSLNLANNFLT 603
            +A++ N   ++ +L++  N L+
Sbjct: 532 CEAIRVNS--SILNLDICENPLS 552



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 168/413 (40%), Gaps = 69/413 (16%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA---- 204
           ES +T+ +       FS++ ++  + GDEGL  L E L  N     +  ++N +TA    
Sbjct: 188 ESAKTIRDILLYNNHFSTLRLARNSIGDEGLVELLEMLKVNNNIVHLDLSSNNLTADGAF 247

Query: 205 ------------------------------AGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
                                          G +  + +L+ N  L+ L L G  I + G
Sbjct: 248 YLFNELVPLHSIISIELSSKDGLNRNKVSVKGCEPIETILKYNHPLQFLGLRGTSIQNAG 307

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +C+   L  N  +  L +S+ DL +E    + + +   +++  L+L+ N +  +G   L
Sbjct: 308 FECILSGLQTNNTLTYLNVSNNDLNEEACNYMVQYISVCNLVE-LDLSYNPLGNNGMDYL 366

Query: 295 AEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +    + S  ++ L+L G    +LG     + L  N+ L +L L  N     G+  + + 
Sbjct: 367 SRIFDKGSFMLKKLNLAGCEIKSLGILKFFQSLSVNRFLEKLILDENHFSGNGVNEIENV 426

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI------ 407
           L+SR   LA L +   SI+A GA  +   ++  ++L  + L  N + D GAE I      
Sbjct: 427 LTSR-IPLAYLSMAKCSINATGAEFIGNGVERNRTLKTLILRDNRLTDVGAECIFKGLFF 485

Query: 408 ------------------ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
                                +KQ+  +TT+ L  N  H      I   ++ NS I +LD
Sbjct: 486 EKLDLKRCNLTDKCVLGLCSMIKQSTQLTTLLLPDNGFHDSSGIVICEAIRVNSSILNLD 545

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           +  NP+       +++V++     N LK    ++     E V    + NN I 
Sbjct: 546 ICENPLSYKYIDQINKVIE----TNRLKYELDRVPMYKREIV----KLNNIIQ 590


>gi|350585452|ref|XP_003356134.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 5-like [Sus
            scrofa]
          Length = 1056

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 152/348 (43%), Gaps = 4/348 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R    +D+      +E +    E++ + N   E +     G+T +   A   VL ++++L
Sbjct: 694  RKIKYLDLESTRLKEEDVVMACEAIKHPNCQLESLRLDRCGLTHSSCLALSQVLVTSVSL 753

Query: 221  KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D  +K LCD L      +++L L    L    ++ +A  L  N  L  L
Sbjct: 754  KSLSLAGNKVTDPSIKPLCDALRSTQCTLQKLILGDCGLTAADSQDLASALTKNQSLTHL 813

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L +N +   G   L  A+ L N +++ L LN       G   LA  L GN+ L  L L 
Sbjct: 814  YLASNSLGSEGVNLLGRAMKLPNCSLQRLILNACNLDVAGCGFLAFALMGNRRLTHLSLS 873

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D+G++ L   +      L  L++    ++A     ++  I   K L  ++L  N 
Sbjct: 874  VNPLEDDGMKLLCEVMMEPSCHLQDLELVKCQLTATCCKSLSHVITRNKHLQSLDLAANA 933

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GD G E + + LKQ  ++  + L    + S    A++  L  +  +TSL+L  N     
Sbjct: 934  LGDNGIEVLCEGLKQKNSLRRLGLEACELTSGCCEALSSALSGSEHLTSLNLMQNNFSLG 993

Query: 459  G-AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            G  K  S   +   ++  L L   Q  A     + ++ R    + I D
Sbjct: 994  GMTKLCSAFAQPTCDLQMLGLWKWQYPAQMRRLLEELQRLKPQMVIGD 1041



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 188/436 (43%), Gaps = 50/436 (11%)

Query: 189  NQTAEEVSFAANGITAAGIKAFD-------GVLQSNIALKTLNLSGNPIGDEGVKCLC-D 240
            ++ AE  S A +G+    IK  D        VL ++  L+ L+LSG+ + ++ +K LC  
Sbjct: 605  DEGAEAWSRAPHGLQ---IKTLDEHWEDLCSVLSTHPNLQHLDLSGSILSEQAMKTLCIK 661

Query: 241  ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            +      ++ L   S  +   G + +   L  N  ++ L+L +  +         EA+  
Sbjct: 662  LRQPTCKIKNLIFKSAQV-TPGLRHLWVTLVINRKIKYLDLESTRLKEEDVVMACEAIKH 720

Query: 301  -NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
             N  + SL L+          AL++ L  + SL+ L L GN + D  I+ L   L S + 
Sbjct: 721  PNCQLESLRLDRCGLTHSSCLALSQVLVTSVSLKSLSLAGNKVTDPSIKPLCDALRSTQC 780

Query: 360  KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTIT 418
             L  L +G+  ++A  +  +A  +   +SL  + L  N +G EG   +  A+K  N ++ 
Sbjct: 781  TLQKLILGDCGLTAADSQDLASALTKNQSLTHLYLASNSLGSEGVNLLGRAMKLPNCSLQ 840

Query: 419  TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNINTLK 477
             + L   N+   G   +A  L  N  +T L L+ NP+  DG K L EV+ +   ++  L+
Sbjct: 841  RLILNACNLDVAGCGFLAFALMGNRRLTHLSLSVNPLEDDGMKLLCEVMMEPSCHLQDLE 900

Query: 478  LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
            L  CQ+ A+  + ++ ++  N  +  LDL AN L D                        
Sbjct: 901  LVKCQLTATCCKSLSHVITRNKHLQSLDLAANALGD------------------------ 936

Query: 538  YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
                     G + L +  K  N +L  + L   E+      A++ AL  +E   +TSLNL
Sbjct: 937  --------NGIEVLCEGLKQKN-SLRRLGLEACELTSGCCEALSSALSGSEH--LTSLNL 985

Query: 598  ANNFLTKFGQSALTDA 613
              N  +  G + L  A
Sbjct: 986  MQNNFSLGGMTKLCSA 1001


>gi|402894336|ref|XP_003910321.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Papio
           anubis]
          Length = 1092

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 157/328 (47%), Gaps = 18/328 (5%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L + L   N  ++ L L        G   ++ 
Sbjct: 664 LCSVLHTNEHLRELDLCHSNLDKSAMNILHQELRHPNCKLQKLLLKC-ITFPDGCQDIST 722

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N++L  L L G+ IGD G+++L   L   + KL  L + + +++      ++  + 
Sbjct: 723 SLIHNQNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSISNVLI 782

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 783 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNK 842

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 843 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLT 902

Query: 503 ILDLRANGLRDEVCSGCNGLSF----FHSAIYSLKHMLFYSLCINYLQGAKCL-AQSFKV 557
            LDL +N L+D      NG+      F     +L+ +     C+  L  A CL   S  V
Sbjct: 903 HLDLGSNWLQD------NGMKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVIV 953

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALK 585
            N  L S+DL  N ++DDG   +  AL+
Sbjct: 954 YNPNLRSLDLGNNNLQDDGVKILCDALR 981



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T     +   VL  + +L  LNL
Sbjct: 733  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSISNVLIRSQSLIFLNL 792

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 793  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNKRLTHLCLADN 852

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 853  VLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 912

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I    +L  ++L  N++ D+G
Sbjct: 913  DNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLRSLDLGNNNLQDDG 972

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 973  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNQRLIKMNLTQNTLGYEGIMK 1032

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1033 LYKVLK 1038



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 12/362 (3%)

Query: 155  NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
            NE  +EL      D+   N     +  L + L +     +           G +     L
Sbjct: 671  NEHLREL------DLCHSNLDKSAMNILHQELRHPNCKLQKLLLKCITFPDGCQDISTSL 724

Query: 215  QSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN 273
              N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      +I+ +L  +
Sbjct: 725  IHNQNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSISNVLIRS 784

Query: 274  SILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
              L  L L+ NN++D  G   L EAL      +  L L        G   L+  L  NK 
Sbjct: 785  QSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNKR 843

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  N +GD G++ +   L   +  L  L + +   ++  + +++  + + KSL  
Sbjct: 844  LTHLCLADNVLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLTH 903

Query: 392  INLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N + D G + + D  +     +  ++L G  + +     +A V+  N  + SLDL
Sbjct: 904  LDLGSNWLQDNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLRSLDL 963

Query: 451  AYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  +  ++L  N
Sbjct: 964  GNNNLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNQRLIKMNLTQN 1023

Query: 510  GL 511
             L
Sbjct: 1024 TL 1025


>gi|326526881|dbj|BAK00829.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1374

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 215/498 (43%), Gaps = 84/498 (16%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +    + +     G  G   LA  L   Q+ E +S   N I  AG +     L  +    
Sbjct: 818  QTLRELSLHTNQIGQVGAMALATRL--PQSIEVLSLDYNQIGVAGAQTLAADLPQS--FH 873

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L L  N IG+ G K L   L     +  L L +  + D G +A+A  L  +  L VL L
Sbjct: 874  KLYLGSNQIGEAGAKALAARLPQT--LRELSLHTNQIGDVGTRALATQLPQS--LEVLYL 929

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH--- 338
             NN I  +G  +LA  L +  ++R L+L  N  G +GA ALA  L   +SLREL LH   
Sbjct: 930  YNNQIGDAGAQALAADLPQ--SLRKLYLPENQIGEVGAEALALCLP--QSLRELSLHTNQ 985

Query: 339  -----------------------GNSIGDEGIRALMSGL----------SSRKGK----- 360
                                   GN+IGD G +AL  GL          ++R GK     
Sbjct: 986  IGEVGAKALAMRLPQVLELLYLCGNNIGDAGAQALALGLPQPLRELSLYANRVGKVGAKV 1045

Query: 361  --------LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                    L  L +GNN I    A  +A   +  ++L  ++L  N IGD GA+ +A  L 
Sbjct: 1046 LATRLPRSLVALYLGNNQIG--DAGALALAARLPRTLQKLHLEKNQIGDAGAQVLAAYLP 1103

Query: 413  QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            Q  T+  + L  N+I   GA A+A  L  +  +  L L  N  G  GAKAL+   +   +
Sbjct: 1104 Q--TLRELSLHTNHISQVGARALATQLPQS--LEVLYLCNNKFGDTGAKALAT--RLPKS 1157

Query: 473  INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
            +  L LG    G SGA  +A  +    ++  L L  N + D   +G   L     A +  
Sbjct: 1158 LKILGLGSIHFGDSGAHTLA--VHIPQSLEQLSLPGNQIGD---AGAQVL-----AAHLP 1207

Query: 533  KHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 592
            + +    L  N++  A  LA + ++ + +L  ++L +N+I D G    AQAL  +   ++
Sbjct: 1208 QSLRVLYLWYNHIGDAGALAFAARLPH-SLEQLNLDYNKIGDAG----AQALAFHLPRSL 1262

Query: 593  TSLNLANNFLTKFGQSAL 610
              L+L  N ++  G  AL
Sbjct: 1263 LKLHLHGNHISDAGAQAL 1280



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 196/437 (44%), Gaps = 38/437 (8%)

Query: 174  FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            FG  G   LA +L   Q+  E+    N I   G +A    L  +  L+ LNL  N IGD 
Sbjct: 648  FGALGAKGLAANL--PQSLRELHLENNSIGDTGAEALAACLPQS--LEALNLDNNSIGDV 703

Query: 234  GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            G + L   L  +  +  L L +  + D GA+ +A  L     LR L   NN I  +G  +
Sbjct: 704  GAQALAAHLPQS--LHGLYLQNNQIGDAGAQDLAAHLPRT--LRELSFFNNGIGDAGALA 759

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
            LA+ L +  +IR+L L  N  G +G  ALA  L   ++LR L L  N IGD G +AL   
Sbjct: 760  LAKHLPQ--SIRTLFLGANQVGDVGVQALAARLP--QTLRTLTLEDNGIGDVGAQALALC 815

Query: 354  LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            L      L  L +  N I   GA  +A  +   +S+  ++L  N IG  GA+ +A  L Q
Sbjct: 816  LPQ---TLRELSLHTNQIGQVGAMALATRLP--QSIEVLSLDYNQIGVAGAQTLAADLPQ 870

Query: 414  NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
              +   + LG N I   GA A+A  L     +  L L  N IG  G +AL+  L    ++
Sbjct: 871  --SFHKLYLGSNQIGEAGAKALAARLPQ--TLRELSLHTNQIGDVGTRALATQLP--QSL 924

Query: 474  NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
              L L   QIG +GA+ +A  L    ++  L L  N + +    G   L+       SL+
Sbjct: 925  EVLYLYNNQIGDAGAQALAADL--PQSLRKLYLPENQIGE---VGAEALAL--CLPQSLR 977

Query: 534  HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 593
             +  ++  I  + GAK LA     V E L    L  N I D GA A+A  L       + 
Sbjct: 978  ELSLHTNQIGEV-GAKALAMRLPQVLELLY---LCGNNIGDAGAQALALGLPQ----PLR 1029

Query: 594  SLNLANNFLTKFGQSAL 610
             L+L  N + K G   L
Sbjct: 1030 ELSLYANRVGKVGAKVL 1046



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 160/365 (43%), Gaps = 54/365 (14%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L +L+ NN  +  +G  +LA  L   ST+  L L  N  GALGA  LA  L   +SLREL
Sbjct: 612 LALLKFNNCCLGDAGVQALAGHL--PSTLCKLFLQKNEFGALGAKGLAANLP--QSLREL 667

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           HL  NSIGD G  AL + L      L  L++ NNSI   GA  +A ++   +SL  + L 
Sbjct: 668 HLENNSIGDTGAEALAACLPQ---SLEALNLDNNSIGDVGAQALAAHLP--QSLHGLYLQ 722

Query: 396 MNDIGDEGAEKIADALKQN------------------------RTITTIDLGGNNIHSKG 431
            N IGD GA+ +A  L +                         ++I T+ LG N +   G
Sbjct: 723 NNQIGDAGAQDLAAHLPRTLRELSFFNNGIGDAGALALAKHLPQSIRTLFLGANQVGDVG 782

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
             A+A  L     + +L L  N IG  GA+AL+  L     +  L L   QIG  GA  +
Sbjct: 783 VQALAARLPQ--TLRTLTLEDNGIGDVGAQALA--LCLPQTLRELSLHTNQIGQVGAMAL 838

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
           A   R   +I +L L  N +      G  G     + +    H L+         GAK L
Sbjct: 839 AT--RLPQSIEVLSLDYNQI------GVAGAQTLAADLPQSFHKLYLGSNQIGEAGAKAL 890

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
           A       + L  + L  N+I D G  A+A  L  + +V    L L NN +   G  AL 
Sbjct: 891 AARLP---QTLRELSLHTNQIGDVGTRALATQLPQSLEV----LYLYNNQIGDAGAQAL- 942

Query: 612 DAKDL 616
            A DL
Sbjct: 943 -AADL 946



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 166/379 (43%), Gaps = 67/379 (17%)

Query: 183  AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            A +L   Q+  E+S   N I   G KA    ++    L+ L L GN IGD G + L   L
Sbjct: 967  ALALCLPQSLRELSLHTNQIGEVGAKAL--AMRLPQVLELLYLCGNNIGDAGAQALALGL 1024

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLK---------NNSI---------------LRV 278
                 +  L L +  +   GAK +A  L          NN I               L+ 
Sbjct: 1025 PQP--LRELSLYANRVGKVGAKVLATRLPRSLVALYLGNNQIGDAGALALAARLPRTLQK 1082

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L L  N I  +G   LA  L +  T+R L L+ N+   +GA ALA  L   +SL  L+L 
Sbjct: 1083 LHLEKNQIGDAGAQVLAAYLPQ--TLRELSLHTNHISQVGARALATQLP--QSLEVLYLC 1138

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N  GD G +AL + L      L +L +G+      GA  +A +I   +SL  ++L  N 
Sbjct: 1139 NNKFGDTGAKALATRLPK---SLKILGLGSIHFGDSGAHTLAVHIP--QSLEQLSLPGNQ 1193

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            IGD GA+ +A  L Q  ++  + L  N+I   GA A A  L  +  +  L+L YN IG  
Sbjct: 1194 IGDAGAQVLAAHLPQ--SLRVLYLWYNHIGDAGALAFAARLPHS--LEQLNLDYNKIGDA 1249

Query: 459  GAKALS-----EVLK--FHGN-----------------INTLKLGWCQIGASGAEFVADM 494
            GA+AL+      +LK   HGN                 +  L LG  QI  +GA+  A  
Sbjct: 1250 GAQALAFHLPRSLLKLHLHGNHISDAGAQALALHLPQSLRKLALGQNQISDTGAKAFAA- 1308

Query: 495  LRYNNTISILDLRANGLRD 513
             R    +  LDL +N + D
Sbjct: 1309 -RLPPFLEQLDLDSNNIGD 1326



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 128/296 (43%), Gaps = 43/296 (14%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R    + +     GD G   LA  L   QT  E+S   N I+  G +A    L  +  L+
Sbjct: 1078 RTLQKLHLEKNQIGDAGAQVLAAYL--PQTLRELSLHTNHISQVGARALATQLPQS--LE 1133

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGV------------------------ERLQLSSVD 257
             L L  N  GD G K L   L  +  +                        E+L L    
Sbjct: 1134 VLYLCNNKFGDTGAKALATRLPKSLKILGLGSIHFGDSGAHTLAVHIPQSLEQLSLPGNQ 1193

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
            + D GA+ +A  L  +  LRVL L  N I  +G  + A  L    ++  L+L+ N  G  
Sbjct: 1194 IGDAGAQVLAAHLPQS--LRVLYLWYNHIGDAGALAFAARL--PHSLEQLNLDYNKIGDA 1249

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            GA ALA  L   +SL +LHLHGN I D G +AL   L     KLA   +G N IS  GA 
Sbjct: 1250 GAQALAFHLP--RSLLKLHLHGNHISDAGAQALALHLPQSLRKLA---LGQNQISDTGAK 1304

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI--HSKG 431
              A  +     L  ++L  N+IGD GA  +A +L     ++  +L GN I   SKG
Sbjct: 1305 AFAARLP--PFLEQLDLDSNNIGDAGAGILASSLP--LKLSKFNLKGNRISDQSKG 1356



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 146/337 (43%), Gaps = 49/337 (14%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           L N +  SL +     G  G  AL + L   ++ L  L  +   +GD G++AL   L S 
Sbjct: 578 LANGSATSLEVGDKRIGLGGVGALGRALGHPHQKLALLKFNNCCLGDAGVQALAGHLPS- 636

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L  L +  N   A GA  +A  +   +SL  ++L  N IGD GAE +A  L Q  ++
Sbjct: 637 --TLCKLFLQKNEFGALGAKGLAANLP--QSLRELHLENNSIGDTGAEALAACLPQ--SL 690

Query: 418 TTIDLGGNNIHSKGASAIAR---------VLKDNSV---------------ITSLDLAYN 453
             ++L  N+I   GA A+A           L++N +               +  L    N
Sbjct: 691 EALNLDNNSIGDVGAQALAAHLPQSLHGLYLQNNQIGDAGAQDLAAHLPRTLRELSFFNN 750

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA AL++ L    +I TL LG  Q+G  G + +A   R   T+  L L  NG+ D
Sbjct: 751 GIGDAGALALAKHLP--QSIRTLFLGANQVGDVGVQALAA--RLPQTLRTLTLEDNGIGD 806

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
               G   L+       +L+ +  ++  I  + GA  LA       +++  + L +N+I 
Sbjct: 807 ---VGAQALAL--CLPQTLRELSLHTNQIGQV-GAMALATRLP---QSIEVLSLDYNQI- 856

Query: 574 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
                A AQ L A+   +   L L +N + + G  AL
Sbjct: 857 ---GVAGAQTLAADLPQSFHKLYLGSNQIGEAGAKAL 890


>gi|156375065|ref|XP_001629903.1| predicted protein [Nematostella vectensis]
 gi|156216913|gb|EDO37840.1| predicted protein [Nematostella vectensis]
          Length = 270

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 115/212 (54%), Gaps = 3/212 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    G+EG   +A+ L  N   +E+  + N +  A + A   +++ N +L+ LNLSGN
Sbjct: 44  LSNTCLGNEGARLVAKGLVKNTCVKELDLSRNNLQKACMSAVGELIELNDSLEILNLSGN 103

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            + DE ++ L   ++    +  L LS   L DE A ++ ++L  N  L  L LN+N ++ 
Sbjct: 104 SLTDEAIEPLMSSILLKCRLAELNLSHNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEV 163

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG  ++A  L +  T++ L ++ NY   +GA AL+  +  NK+L EL + GN I  EG  
Sbjct: 164 SGLIAMANGLQKTRTLKFLDVSWNYIHDVGAKALSDIVSANKALEELVICGNFISKEG-- 221

Query: 349 ALMSGLSSRKGK-LAVLDIGNNSISAKGAFHV 379
           A   G S RK K L VL IG N +  +GA+ +
Sbjct: 222 AAQIGQSLRKNKTLRVLRIGKNLLRNEGAYSI 253



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 57/294 (19%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           + L+L+G P+G   +  +   L  +  V RL LS+  L +EGA+ +A+ L  N+ ++ L+
Sbjct: 12  EALDLTGCPVGPVNISAIVRKLFPSMFVTRLVLSNTCLGNEGARLVAKGLVKNTCVKELD 71

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L+ N +  +  +++ E                             +E N SL  L+L GN
Sbjct: 72  LSRNNLQKACMSAVGEL----------------------------IELNDSLEILNLSGN 103

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           S+ DE I  LMS +                            +  C+ L  +NL  N + 
Sbjct: 104 SLTDEAIEPLMSSI----------------------------LLKCR-LAELNLSHNILC 134

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DE A  +   L  NR +T + L  N++   G  A+A  L+    +  LD+++N I   GA
Sbjct: 135 DEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTRTLKFLDVSWNYIHDVGA 194

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           KALS+++  +  +  L +    I   GA  +   LR N T+ +L +  N LR+E
Sbjct: 195 KALSDIVSANKALEELVICGNFISKEGAAQIGQSLRKNKTLRVLRIGKNLLRNE 248



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N+ +E +      +    I A    L  ++ +  L LS   +G+EG + +   LV N  V
Sbjct: 8   NRKSEALDLTGCPVGPVNISAIVRKLFPSMFVTRLVLSNTCLGNEGARLVAKGLVKNTCV 67

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + L LS  +L+     A+ EL++ N  L +L L+ N +       L  ++L    +  L+
Sbjct: 68  KELDLSRNNLQKACMSAVGELIELNDSLEILNLSGNSLTDEAIEPLMSSILLKCRLAELN 127

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N      A+++ + L  N++L  L L+ N +   G+ A+ +GL   +  L  LD+  
Sbjct: 128 LSHNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTR-TLKFLDVSW 186

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +++ +   K+L  + +  N I  EGA +I  +L++N+T+  + +G N + 
Sbjct: 187 NYIHDVGAKALSDIVSANKALEELVICGNFISKEGAAQIGQSLRKNKTLRVLRIGKNLLR 246

Query: 429 SKGASAI 435
           ++GA +I
Sbjct: 247 NEGAYSI 253



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 3/202 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S  N     +  + E +  N + E ++ + N +T   I+     +     L  LNLS
Sbjct: 70  LDLSRNNLQKACMSAVGELIELNDSLEILNLSGNSLTDEAIEPLMSSILLKCRLAELNLS 129

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N + DE    +  +L+ N  + RL L+S  L   G  A+A  L+    L+ L+++ N I
Sbjct: 130 HNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTRTLKFLDVSWNYI 189

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  +L++ +  N  +  L + GN+    GA  + + L  NK+LR L +  N + +EG
Sbjct: 190 HDVGAKALSDIVSANKALEELVICGNFISKEGAAQIGQSLRKNKTLRVLRIGKNLLRNEG 249

Query: 347 IRALMSGL--SSRKGKLAVLDI 366
             +++ GL  SS  G L V+D+
Sbjct: 250 AYSILHGLMRSSHSG-LEVVDL 270



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +++S     DE    + + L  N+    +   +N +  +G+ A    LQ    LK L
Sbjct: 123 LAELNLSHNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTRTLKFL 182

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N I D G K L DI+  N  +E L +    +  EGA  I + L+ N  LRVL +  
Sbjct: 183 DVSWNYIHDVGAKALSDIVSANKALEELVICGNFISKEGAAQIGQSLRKNKTLRVLRIGK 242

Query: 284 NMIDYSGFTSLAEALLENS 302
           N++   G  S+   L+ +S
Sbjct: 243 NLLRNEGAYSILHGLMRSS 261



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 11/210 (5%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G+EGA  +A  L +N  +  +DL  NN+     SA+  +++ N  +  L+L+ N +  +
Sbjct: 49  LGNEGARLVAKGLVKNTCVKELDLSRNNLQKACMSAVGELIELNDSLEILNLSGNSLTDE 108

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
             + L   +     +  L L    +    A  +  +L  N  ++ L L +N L  EV   
Sbjct: 109 AIEPLMSSILLKCRLAELNLSHNILCDEFASSMGQVLLTNRNLTRLLLNSNHL--EV--- 163

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
            +GL    + +   + + F  +  NY+   GAK L+      N+AL  + +  N I  +G
Sbjct: 164 -SGLIAMANGLQKTRTLKFLDVSWNYIHDVGAKALSDIVSA-NKALEELVICGNFISKEG 221

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           A  I Q+L+ N+ + V  L +  N L   G
Sbjct: 222 AAQIGQSLRKNKTLRV--LRIGKNLLRNEG 249



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G      I   L  +  +T + L    + ++GA  +A+ L  N+ +  LDL+ N +   
Sbjct: 21  VGPVNISAIVRKLFPSMFVTRLVLSNTCLGNEGARLVAKGLVKNTCVKELDLSRNNLQKA 80

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
              A+ E+++ + ++  L L    +     E +   +     ++ L+L  N L DE  S 
Sbjct: 81  CMSAVGELIELNDSLEILNLSGNSLTDEAIEPLMSSILLKCRLAELNLSHNILCDEFASS 140

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRDDGA 577
              +   +    +L  +L  S   N+L+ +  +A +  +     L  +D+++N I D GA
Sbjct: 141 MGQVLLTNR---NLTRLLLNS---NHLEVSGLIAMANGLQKTRTLKFLDVSWNYIHDVGA 194

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            A++  + AN+  A+  L +  NF++K G + +
Sbjct: 195 KALSDIVSANK--ALEELVICGNFISKEGAAQI 225


>gi|326431433|gb|EGD77003.1| hypothetical protein PTSG_12575 [Salpingoeca sp. ATCC 50818]
          Length = 1165

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 18/174 (10%)

Query: 342 IGDEGI-RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +GDE + R  +  +S +  +  +L I NN+  +K                 +NL  ND+G
Sbjct: 345 VGDETLFRECLQRVSGKNARNKILSIWNNTCGSK-----------------VNLADNDLG 387

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            EG + I +ALK N T+T++DL  NN+  +G  AI   LK N+ +TSLDL  N +G +G 
Sbjct: 388 PEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKVNTTLTSLDLDGNDLGPEGG 447

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           KA+ E LK +  + +L L    +G  G + + + L+ N T++ L+L  N L  E
Sbjct: 448 KAIGEALKVNTTLTSLSLRVNDLGPEGGKAIGEALKVNTTLTSLNLDRNDLGPE 501



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 137/316 (43%), Gaps = 48/316 (15%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDE--GLFFLAESLGYNQTAEEVSFAA 199
           + G L RE +    E AK  RA  +     +  G E  G     E + + Q  E+     
Sbjct: 259 YEGILMREKQLQPAEIAKFRRACKAKTWRNKEMGSERHGTLEGTEEV-HEQGDEKQEEGR 317

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV--KCLCDI-----------LVDNA 246
            G      +      Q+++    +      +GDE +  +CL  +           + +N 
Sbjct: 318 EGSQEEQEETQSHQHQASVECPPVRKG---VGDETLFRECLQRVSGKNARNKILSIWNNT 374

Query: 247 GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
              ++ L+  DL  EG KAI E LK N+ L  L+L +N +   G  ++ EAL  N+T+ S
Sbjct: 375 CGSKVNLADNDLGPEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKVNTTLTS 434

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L+GN  G  G  A+ + L+ N +L  L L  N +G EG +A                 
Sbjct: 435 LDLDGNDLGPEGGKAIGEALKVNTTLTSLSLRVNDLGPEGGKA----------------- 477

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                       + E +K   +L  +NL  ND+G EG + I +ALK N T+T++ +  N+
Sbjct: 478 ------------IGEALKVNTTLTSLNLDRNDLGPEGGKAIGEALKVNTTLTSLYIDSNS 525

Query: 427 IHSKGASAIARVLKDN 442
           I  +  S+I   ++ N
Sbjct: 526 ISGRLESSIKSAVERN 541



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 4/180 (2%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++  + G EG   + E+L  N T   +   +N +   G KA    L+ N  L +L+
Sbjct: 377 SKVNLADNDLGPEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKVNTTLTSLD 436

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L GN +G EG K + + L  N  +  L L   DL  EG KAI E LK N+ L  L L+ N
Sbjct: 437 LDGNDLGPEGGKAIGEALKVNTTLTSLSLRVNDLGPEGGKAIGEALKVNTTLTSLNLDRN 496

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGA---NALAKGLEGNKSLRELHLHGN 340
            +   G  ++ EAL  N+T+ SL+++ N   G L +   +A+ +  +  K L+ L  HG+
Sbjct: 497 DLGPEGGKAIGEALKVNTTLTSLYIDSNSISGRLESSIKSAVERNKQRQKELKALLEHGS 556



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 4/202 (1%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           S+  N    +V+ A N +   G KA    L+ N  L +L+L  N +  EG K + + L  
Sbjct: 369 SIWNNTCGSKVNLADNDLGPEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKV 428

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  +  L L   DL  EG KAI E LK N+ L  L L  N +   G  ++ EAL  N+T+
Sbjct: 429 NTTLTSLDLDGNDLGPEGGKAIGEALKVNTTLTSLSLRVNDLGPEGGKAIGEALKVNTTL 488

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG---DEGIRALMSGLSSRKGKL 361
            SL+L+ N  G  G  A+ + L+ N +L  L++  NSI    +  I++ +     R+ +L
Sbjct: 489 TSLNLDRNDLGPEGGKAIGEALKVNTTLTSLYIDSNSISGRLESSIKSAVERNKQRQKEL 548

Query: 362 -AVLDIGNNSISAKGAFHVAEY 382
            A+L+ G+  +S    F    Y
Sbjct: 549 KALLEHGSVPLSTAKVFVCGHY 570



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 35/196 (17%)

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           + ++L  N++  +G  AI   LK N+ +TSLDL  N +  +G KA+ E LK +  + +L 
Sbjct: 377 SKVNLADNDLGPEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKVNTTLTSLD 436

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
           L    +G  G + + + L+ N T++ L LR N L  E                       
Sbjct: 437 LDGNDLGPEGGKAIGEALKVNTTLTSLSLRVNDLGPE----------------------- 473

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
                    G K + ++ KV N  LTS++L  N++  +G  AI +ALK N    +TSL +
Sbjct: 474 ---------GGKAIGEALKV-NTTLTSLNLDRNDLGPEGGKAIGEALKVN--TTLTSLYI 521

Query: 598 ANNFLTKFGQSALTDA 613
            +N ++   +S++  A
Sbjct: 522 DSNSISGRLESSIKSA 537



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 3/173 (1%)

Query: 129 NWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY 188
           N + G+  NL     G    E  + + E  K     +S+D+   N   EG   + E+L  
Sbjct: 372 NNTCGSKVNLADNDLGP---EGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKV 428

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N T   +    N +   G KA    L+ N  L +L+L  N +G EG K + + L  N  +
Sbjct: 429 NTTLTSLDLDGNDLGPEGGKAIGEALKVNTTLTSLSLRVNDLGPEGGKAIGEALKVNTTL 488

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
             L L   DL  EG KAI E LK N+ L  L +++N I     +S+  A+  N
Sbjct: 489 TSLNLDRNDLGPEGGKAIGEALKVNTTLTSLYIDSNSISGRLESSIKSAVERN 541



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           +N+  + ++LA N +G +G KA+ E LK +  + +L L    +   G + + + L+ N T
Sbjct: 372 NNTCGSKVNLADNDLGPEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKVNTT 431

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           ++ LDL  N L  E                                G K + ++ KV N 
Sbjct: 432 LTSLDLDGNDLGPE--------------------------------GGKAIGEALKV-NT 458

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            LTS+ L  N++  +G  AI +ALK N    +TSLNL  N L   G  A+ +A
Sbjct: 459 TLTSLSLRVNDLGPEGGKAIGEALKVN--TTLTSLNLDRNDLGPEGGKAIGEA 509


>gi|326432234|gb|EGD77804.1| hypothetical protein PTSG_08894 [Salpingoeca sp. ATCC 50818]
          Length = 575

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 34/346 (9%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           L   + +D+SG    +E +  +A  L      + +    NG+ +  +      +++ + L
Sbjct: 137 LHRLTHLDLSGSITDNECVRHVASRLPTMACLQHLLLEDNGLDSRDVDVLFNAVET-LPL 195

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            TL+LS N +GD G   L   L     ++ L L +V +   G   I   +K    +  L+
Sbjct: 196 VTLSLSDNELGDIGATTLASHLRKMPDLQHLGLDNVAMSSTGLHTI---MKACPSVATLK 252

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +++N ID +    LAEA+                                 LR L L   
Sbjct: 253 ISDNDIDAALTKPLAEAM------------------------------QVCLRHLELKST 282

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +    +   ++ L SR   L VL + +N +S  G   +A+ +K   SL  ++L  N+I 
Sbjct: 283 DLDANDLMPAINTLKSRGCVLEVLRLWDNRVSDHGVAAIAQSLKENASLKVLDLRFNNIS 342

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             GA  +A AL++N T+ T+ L  N I ++G   +A +L  NS + +LDL  N IG DGA
Sbjct: 343 SHGARSLASALEKNTTLHTLSLKFNRIGNRGCKHLAGMLAKNSSLHTLDLEDNEIGDDGA 402

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            +L+  L+ + ++  L L + ++           L  N  +++LDL
Sbjct: 403 VSLARGLERNTSVRELNLRYNKVSDKALADFGKCLENNRALAVLDL 448



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 147/362 (40%), Gaps = 72/362 (19%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L LS     +E  + +A  L   + L+ L L +N +D      L  A+ E   + +L L+
Sbjct: 143 LDLSGSITDNECVRHVASRLPTMACLQHLLLEDNGLDSRDVDVLFNAV-ETLPLVTLSLS 201

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G +GA  LA  L     L+ L L   ++   G+  +M    S    +A L I +N 
Sbjct: 202 DNELGDIGATTLASHLRKMPDLQHLGLDNVAMSSTGLHTIMKACPS----VATLKISDND 257

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I A     +AE ++ C  L  + L   D            L  N  +  I    N + S+
Sbjct: 258 IDAALTKPLAEAMQVC--LRHLELKSTD------------LDANDLMPAI----NTLKSR 299

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G            V+  L L  N +   G  A+++ LK + ++  L L +  I + GA  
Sbjct: 300 GC-----------VLEVLRLWDNRVSDHGVAAIAQSLKENASLKVLDLRFNNISSHGARS 348

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +A  L  N T+  L L+ N + +  C                KH+            A  
Sbjct: 349 LASALEKNTTLHTLSLKFNRIGNRGC----------------KHL------------AGM 380

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           LA+     N +L ++DL  NEI DDGA ++A+ L+ N   +V  LNL  N   K    AL
Sbjct: 381 LAK-----NSSLHTLDLEDNEIGDDGAVSLARGLERN--TSVRELNLRYN---KVSDKAL 430

Query: 611 TD 612
            D
Sbjct: 431 AD 432



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G+  +A+SL  N + + +    N I++ G ++    L+ N  L TL+L  N IG+ G 
Sbjct: 315 DHGVAAIAQSLKENASLKVLDLRFNNISSHGARSLASALEKNTTLHTLSLKFNRIGNRGC 374

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K L  +L  N+ +  L L   ++ D+GA ++A  L+ N+ +R L L  N +         
Sbjct: 375 KHLAGMLAKNSSLHTLDLEDNEIGDDGAVSLARGLERNTSVRELNLRYNKVSDKALADFG 434

Query: 296 EALLENSTIRSLHLNGN---YGGAL--GANALAKGLEGNKSLRELHLHGNS 341
           + L  N  +  L L+      GG    G   L + L  N S+R +++H ++
Sbjct: 435 KCLENNRALAVLDLSSKPHVVGGITMDGLMVLERALLRNTSVRRINVHNHA 485



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 5/159 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KE  +   +D+   N    G   LA +L  N T   +S   N I   G K   G+L  N 
Sbjct: 326 KENASLKVLDLRFNNISSHGARSLASALEKNTTLHTLSLKFNRIGNRGCKHLAGMLAKNS 385

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L TL+L  N IGD+G   L   L  N  V  L L    + D+      + L+NN  L V
Sbjct: 386 SLHTLDLEDNEIGDDGAVSLARGLERNTSVRELNLRYNKVSDKALADFGKCLENNRALAV 445

Query: 279 LELNNNM-----IDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+L++       I   G   L  ALL N+++R ++++ +
Sbjct: 446 LDLSSKPHVVGGITMDGLMVLERALLRNTSVRRINVHNH 484


>gi|449458432|ref|XP_004146951.1| PREDICTED: RAN GTPase-activating protein 1-like [Cucumis sativus]
 gi|449517201|ref|XP_004165634.1| PREDICTED: RAN GTPase-activating protein 1-like [Cucumis sativus]
          Length = 539

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 1/275 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L L  + I +E  + + +++     +  LQ  +    
Sbjct: 224 NAMGEKGVRAFGLLLRSQKNLEELYLMNDGISEEAARAVRELIPSTDKLRILQFHNNMTG 283

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA +I+E++K++  L     ++  +   G  +LAEA+   + ++ L L  N  G    
Sbjct: 284 DEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIGTCTRLKKLDLRDNMFGVEAG 343

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K +     L E++L   ++ DEG  AL + L      L VL++  N I+AKGA  +
Sbjct: 344 VALSKSISSFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVLEVAGNDITAKGAVSI 403

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           A  +   + L  + L  N++ D+G   I  AL+     ++ +D   N+I   GA  +A++
Sbjct: 404 AACVATKQFLSKLYLAENELKDDGVILIGKALQDGHGQLSEVDFSTNSIRRAGARFVAQI 463

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           L        L++  N I  +G   + E+ K   N+
Sbjct: 464 LVQKPGFKLLNINANYISEEGIDEVKEIFKNSPNM 498



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 36/267 (13%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L L  N++G++G+RA    L S+K  L  L + N+ IS + A  V
Sbjct: 205 NIFSAALEGC-DLRYLDLSNNAMGEKGVRAFGLLLRSQKN-LEELYLMNDGISEEAARAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I +   L  +  + N  GDEGA  I++ +K +  +         + S+G  A+A  +
Sbjct: 263 RELIPSTDKLRILQFHNNMTGDEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALAEAI 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+ +     +  + L +  +   GAE +A+ L+ + 
Sbjct: 323 GTCTRLKKLDLRDNMFGVEAGVALSKSISSFPGLTEIYLSYLNLEDEGAEALANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            ++ +L++  N   D    G   +                         A C+A      
Sbjct: 383 PSLEVLEVAGN---DITAKGAVSI-------------------------AACVA-----T 409

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALK 585
            + L+ + LA NE++DDG   I +AL+
Sbjct: 410 KQFLSKLYLAENELKDDGVILIGKALQ 436



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 110/263 (41%), Gaps = 36/263 (13%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           +++E  K   A      S    G EG   LAE++G                         
Sbjct: 289 SISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIG------------------------- 323

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
              +   LK L+L  N  G E    L   +    G+  + LS ++L DEGA+A+A  LK+
Sbjct: 324 ---TCTRLKKLDLRDNMFGVEAGVALSKSISSFPGLTEIYLSYLNLEDEGAEALANALKD 380

Query: 273 NSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNK 330
           ++  L VLE+  N I   G  S+A  +     +  L+L  N     G   + K L+ G+ 
Sbjct: 381 SAPSLEVLEVAGNDITAKGAVSIAACVATKQFLSKLYLAENELKDDGVILIGKALQDGHG 440

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L E+    NSI   G R +   L  + G   +L+I  N IS +G   V E  KN  ++L
Sbjct: 441 QLSEVDFSTNSIRRAGARFVAQILVQKPG-FKLLNINANYISEEGIDEVKEIFKNSPNML 499

Query: 391 WINLYMNDIG----DEGAEKIAD 409
             +L  ND      DE AE+  D
Sbjct: 500 G-SLDENDPDGEDYDEDAEENGD 521



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 15/228 (6%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           ++ C  L +++L  N +G++G       L+  + +  + L  + I  + A A+  ++   
Sbjct: 211 LEGC-DLRYLDLSNNAMGEKGVRAFGLLLRSQKNLEELYLMNDGISEEAARAVRELIPST 269

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  L    N  G +GA ++SE++K    +   +    ++G+ G   +A+ +     + 
Sbjct: 270 DKLRILQFHNNMTGDEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIGTCTRLK 329

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL----QGAKCLAQSFKVV 558
            LDLR N        G         +I S   +    + ++YL    +GA+ LA + K  
Sbjct: 330 KLDLRDNMF------GVEAGVALSKSISSFPGL--TEIYLSYLNLEDEGAEALANALKDS 381

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
             +L  +++A N+I   GA +IA  +   +   ++ L LA N L   G
Sbjct: 382 APSLEVLEVAGNDITAKGAVSIAACVATKQ--FLSKLYLAENELKDDG 427


>gi|390477774|ref|XP_003735361.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC5, partial [Callithrix
            jacchus]
          Length = 1812

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 7/294 (2%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K   L+ + +  EG+  L   L     +E L+ S+ +  +EG KA+   L+   +L+ L+
Sbjct: 1444 KKFRLTSSRVSTEGLAHLASGLGHCHHLEELEWSNTEFDEEGTKALMRALEEKWMLKRLD 1503

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +    L++ L    SL EL L  N
Sbjct: 1504 LSHLLLNGSTLDLLTRGLSHMTLLQSLRLNRNSIGDVDCCHLSEALRAATSLEELDLSYN 1563

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G+  L + L  R  +L  +D+  NSIS  G   +AE +  C+ L  + L  ND+G
Sbjct: 1564 QIGDAGVGYLATIL-PRLPELRKIDLSANSISPAGGVKLAESLALCRCLEELMLGCNDLG 1622

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A ++A  L Q+  +  + L  +++  KGA ++ + L  +  +  + LA N + A+G 
Sbjct: 1623 DHTALELAQELPQH--LRVLRLPSSHLGPKGALSLVQALDGSPHVEEISLAENNL-AEGV 1679

Query: 461  KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                + L     I+ +    C+I    A+ +         + ++ L  N L DE
Sbjct: 1680 PRFCKGLPLLRRIDLVS---CKIDNQTAKLLTSSFTLCPALEVILLSWNLLGDE 1730



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 147/343 (42%), Gaps = 8/343 (2%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
            ++      EGL  LA  LG+    EE+ ++       G KA    L+    LK L+LS  
Sbjct: 1448 LTSSRVSTEGLAHLASGLGHCHHLEELEWSNTEFDEEGTKALMRALEEKWMLKRLDLSHL 1507

Query: 229  PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
             +    +  L   L     ++ L+L+   + D     ++E L+  + L  L+L+ N I  
Sbjct: 1508 LLNGSTLDLLTRGLSHMTLLQSLRLNRNSIGDVDCCHLSEALRAATSLEELDLSYNQIGD 1567

Query: 289  SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            +G   LA  L     +R + L+ N     G   LA+ L   + L EL L  N +GD    
Sbjct: 1568 AGVGYLATILPRLPELRKIDLSANSISPAGGVKLAESLALCRCLEELMLGCNDLGDHTAL 1627

Query: 349  ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             L   L      L VL + ++ +  KGA  + + +     +  I+L  N++  EG  +  
Sbjct: 1628 ELAQELPQH---LRVLRLPSSHLGPKGALSLVQALDGSPHVEEISLAENNLA-EGVPRFC 1683

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
              L   R    IDL    I ++ A  +         +  + L++N +G + A  L++VL 
Sbjct: 1684 KGLPLLR---RIDLVSCKIDNQTAKLLTSSFTLCPALEVILLSWNLLGDEAAAELAQVLP 1740

Query: 469  FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              G +  + L   QI A GA  +A+ L   +++ ++ L  N +
Sbjct: 1741 RMGRLKRVDLEKNQITARGAWLLAEGL-AQSSVQVIRLWNNNI 1782



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 9/297 (3%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  + L    +E      +D+S        L  L   L +    + +    N I      
Sbjct: 1484 EGTKALMRALEEKWMLKRLDLSHLLLNGSTLDLLTRGLSHMTLLQSLRLNRNSIGDVDCC 1543

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                 L++  +L+ L+LS N IGD GV  L  IL     + ++ LS+  +   G   +AE
Sbjct: 1544 HLSEALRAATSLEELDLSYNQIGDAGVGYLATILPRLPELRKIDLSANSISPAGGVKLAE 1603

Query: 269  LLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L     L  L L  N++ D++    LA+ L ++  +R L L  ++ G  GA +L + L+
Sbjct: 1604 SLALCRCLEELMLGCNDLGDHTAL-ELAQELPQH--LRVLRLPSSHLGPKGALSLVQALD 1660

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            G+  + E+ L  N++  EG+     GL      L  +D+ +  I  + A  +      C 
Sbjct: 1661 GSPHVEEISLAENNLA-EGVPRFCKGLP----LLRRIDLVSCKIDNQTAKLLTSSFTLCP 1715

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +L  I L  N +GDE A ++A  L +   +  +DL  N I ++GA  +A  L  +SV
Sbjct: 1716 ALEVILLSWNLLGDEAAAELAQVLPRMGRLKRVDLEKNQITARGAWLLAEGLAQSSV 1772



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 105/478 (21%), Positives = 184/478 (38%), Gaps = 75/478 (15%)

Query: 165  SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
            SS+D+S  N   E    L E+L      +E S       +  I  F    + + A KTL 
Sbjct: 1221 SSLDLSHNNASQESALCLLETLSSCPRVQEASVNLGSKQSFQIH-FS---KEDQAGKTLR 1276

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            LS      E V  L   L  +  +  L L+   L  E    +  L++  + L  L +   
Sbjct: 1277 LSECSFRPEHVSRLAAGLSQSLQLMELMLTQCCLGQEQLTTLLSLVQRPAGLFSLRVQEP 1336

Query: 285  MIDYSGFTSLAEALLENS----------TIRSLHLNGNYG------------------GA 316
             +D +G  SL E   + S          T + LH+   +                   G 
Sbjct: 1337 WVDQAGVLSLLEVCAQASGNVTEISISETQQQLHVQLEFPRQEENPEAVALRLAHCDLGT 1396

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEG--IRALMSGLSSRKGKLAVLDIGNNSISAK 374
              +  + + +E    L++L L   ++ ++G     L+  L     +L    + ++ +S +
Sbjct: 1397 HHSLLVRQLMETCARLQQLSLSQVNLCEDGDSSSLLLRSLLLSLSELKKFRLTSSRVSTE 1456

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G  H+A  + +C  L  +     +  +EG + +  AL++   +  +DL    ++      
Sbjct: 1457 GLAHLASGLGHCHHLEELEWSNTEFDEEGTKALMRALEEKWMLKRLDLSHLLLNGSTLDL 1516

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            + R L   +++ SL L  N IG      LSE L+   ++  L L + QIG +G  ++A +
Sbjct: 1517 LTRGLSHMTLLQSLRLNRNSIGDVDCCHLSEALRAATSLEELDLSYNQIGDAGVGYLATI 1576

Query: 495  LRYNNTISILDLRANGLR-----------------DEVCSGCNGLSFFHSAIYSLKHMLF 537
            L     +  +DL AN +                  +E+  GCN L   H+A         
Sbjct: 1577 LPRLPELRKIDLSANSISPAGGVKLAESLALCRCLEELMLGCNDLG-DHTA--------- 1626

Query: 538  YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
                   L+ A+ L Q  +V+        L  + +   GA ++ QAL  +  V   SL
Sbjct: 1627 -------LELAQELPQHLRVLR-------LPSSHLGPKGALSLVQALDGSPHVEEISL 1670



 Score = 39.3 bits (90), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 33/275 (12%)

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+ SGN +GDEG   L  +L     ++ L LS   L  +    +A     +++  V  L+
Sbjct: 971  LDFSGNALGDEGAARLAQLLPGLGALQSLNLSENGLSLDAVLGLARCF--STLQWVFHLD 1028

Query: 283  NNMIDYSG----FTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
               +  +G      + AE L   ++   RSL L+      L    L   LE      EL 
Sbjct: 1029 IRGMWTTGSLPDLPAAAEFLGFHQHCITRSLFLSECPLEPLTLTHLCATLEACPGPVELQ 1088

Query: 337  LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC--------KS 388
            L    + D+ ++  +  L  R  +L++L +   ++S +  F +A+    C        KS
Sbjct: 1089 LSXEVLSDQSLKTXLHCLC-RLLQLSLLQLSQTALSPRSPFLLADIFSLCPWVKKVDLKS 1147

Query: 389  LLWINLYMND----------------IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            L    L+                   +  E  E +   L + + ++ +DL  N +     
Sbjct: 1148 LHHATLHFRSNEEQKGMCCGRFTGCSLSQEHMESLCWLLSKCKDLSQVDLSVNLLGDGRI 1207

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             ++ R L    + +SLDL++N    + A  L E L
Sbjct: 1208 RSVLRCLPQVPISSSLDLSHNNASQESALCLLETL 1242


>gi|154346260|ref|XP_001569067.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066409|emb|CAM44200.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1079

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 171/442 (38%), Gaps = 93/442 (21%)

Query: 195 VSFAANGITA--AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           V F+ N +T     +      L+ N  ++ LNLS N  GD G   L D +  N+ +  L 
Sbjct: 463 VDFSGNDVTLNDDSVWVLAQALRLNSTVRRLNLSHNSFGDMGASYLADYIASNSTMLELN 522

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LSS  + + GA  + E L  N  L++L+L+NNM+D  G ++L   L EN+T+R L L   
Sbjct: 523 LSSCTIGNRGAHRLCEALATNQTLQLLDLSNNMMDGDGLSALLRVLRENNTLRELKLERT 582

Query: 313 YGGA-------------------------------------------------LGANALA 323
              A                                                 L  + + 
Sbjct: 583 RVPAEFVERVKIACSLNRECAAVKRVCYRLHDEDVSLKKIELSNPDDERVIDDLSVSTIC 642

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  N  +  + L GN IG+ G  AL + LS R  K+  +++  N I       + +  
Sbjct: 643 TALNNNTFVEVIDLSGNHIGENGCAALAAMLSQRTCKVRTINLSKNPIDDDAVAKLVDGF 702

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            N K+L  + LY  +I D G E +A  L++N++I  I +  ++  SK  S + R L  N+
Sbjct: 703 PNTKTLREVLLYNTNITDLGIEILAKGLEKNQSIVWIGVADDDAVSKQVSLLKRNLALNT 762

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
             T  +L +  +  D    L +V       +  +   C +  S  +F+            
Sbjct: 763 GPT--ELKHIILSIDAGAVLEDV-------DMSRPIDCSLDDSMCQFL------------ 801

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
                       C+   G     S    L H    S C+ Y+     L  S       L 
Sbjct: 802 ------------CASLVGSRMLRS--LKLSHNTLSSACVPYIVEVVELCPS-------LV 840

Query: 564 SIDLAFNEIRDDGAFAIAQALK 585
           S+DL+ N+I + GA  I   L+
Sbjct: 841 SLDLSDNQIDESGAQQIIACLE 862



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 122/531 (22%), Positives = 217/531 (40%), Gaps = 88/531 (16%)

Query: 166 SVDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           SVD SG +    D+ ++ LA++L  N T   ++ + N     G       + SN  +  L
Sbjct: 462 SVDFSGNDVTLNDDSVWVLAQALRLNSTVRRLNLSHNSFGDMGASYLADYIASNSTMLEL 521

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS   IG+ G   LC+ L  N  ++ L LS+  +  +G  A+  +L+ N+ LR L+L  
Sbjct: 522 NLSSCTIGNRGAHRLCEALATNQTLQLLDLSNNMMDGDGLSALLRVLRENNTLRELKLER 581

Query: 284 NMI--DYSGFTSLAEAL---------------LENSTIRSLHLNG----NYGGALGANAL 322
             +  ++     +A +L                E+ +++ + L+          L  + +
Sbjct: 582 TRVPAEFVERVKIACSLNRECAAVKRVCYRLHDEDVSLKKIELSNPDDERVIDDLSVSTI 641

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
              L  N  +  + L GN IG+ G  AL + LS R  K+  +++  N I       + + 
Sbjct: 642 CTALNNNTFVEVIDLSGNHIGENGCAALAAMLSQRTCKVRTINLSKNPIDDDAVAKLVDG 701

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR----- 437
             N K+L  + LY  +I D G E +A  L++N++I  I +  ++  SK  S + R     
Sbjct: 702 FPNTKTLREVLLYNTNITDLGIEILAKGLEKNQSIVWIGVADDDAVSKQVSLLKRNLALN 761

Query: 438 -----------------VLKD-------------------------NSVITSLDLAYNPI 455
                            VL+D                         + ++ SL L++N +
Sbjct: 762 TGPTELKHIILSIDAGAVLEDVDMSRPIDCSLDDSMCQFLCASLVGSRMLRSLKLSHNTL 821

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
            +     + EV++   ++ +L L   QI  SGA+ +   L   + +  +D+  N    + 
Sbjct: 822 SSACVPYIVEVVELCPSLVSLDLSDNQIDESGAQQIIACLERVSHLRSVDVTNNLFSPQS 881

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL---AQSFKVVNE------------ 560
               + L   +     LK +   +     L     L     S+K+ +E            
Sbjct: 882 LERVSHLVSLNLGSEVLKKLHLATARGEALPKDIDLNGVTNSYKLTDEDVVILAGILQDC 941

Query: 561 -ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
             + S+DL+ N   D G  AIA+ L+ N   A+ +LNL  N +   G +AL
Sbjct: 942 SVVKSLDLSSNNFSDAGCIAIAEVLRVNH--ALEALNLTGNAIGANGGAAL 990



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 101/456 (22%), Positives = 196/456 (42%), Gaps = 82/456 (17%)

Query: 130 WSVGAGTNLLSG------FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFL- 182
           + +   + LLSG      F+G  + + ++ L ++  +L    +VD SG + G  G+F + 
Sbjct: 129 YPLAVRSTLLSGKASQISFSGMSYGDLEKELLQYLLQLEGLEAVDFSGLDLGPGGMFVVG 188

Query: 183 ----------------------------AESLGYNQTAEEVSFAAN-GITAAGI-KAFDG 212
                                       A  L ++++     F++N G+T   + K    
Sbjct: 189 TFLKDTQVSSLSFRECSLTNDAVLKFVEAADLAHHRSLRSFDFSSNMGLTNDLVRKLISS 248

Query: 213 VLQSNIALKTLNLSGNPIGDE---GVKCLCDILVDNAGVERLQLSSVDLRDEGAKA---- 265
           +   N  + +  L+   I       V+  C +  ++  ++R   + V LR+  + A    
Sbjct: 249 MFDHNSCITSFVLTATSITPAYCGVVQKECAVNQEHPAIKR---AVVALRNNSSAAQEIN 305

Query: 266 -------------IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
                        +A+ +  +S+++ L ++N ++D +G   L++AL +NST++ + L   
Sbjct: 306 LQWDAPLPTCMYHLADFIAASSVIQHLNISNTLVDDAGLKLLSDALQKNSTLKVIELANC 365

Query: 313 YGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNS 370
           +  A G   L   L +G  ++ E+++  NS+ D+ ++ + + L +   KL  L++  N +
Sbjct: 366 HVTAAGIQTLFVVLAKGKCAVEEVNIANNSLDDDSVQFITAALRANP-KLTTLNVDVNPA 424

Query: 371 ISAKGAFHVAEYI-----------------KNCKSLLWINLYMNDI--GDEGAEKIADAL 411
           ISA     +A                     NCK ++ ++   ND+   D+    +A AL
Sbjct: 425 ISAASMQEIAGLTMVNRAPPRIRSVLPSIENNCKDVVSVDFSGNDVTLNDDSVWVLAQAL 484

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           + N T+  ++L  N+    GAS +A  +  NS +  L+L+   IG  GA  L E L  + 
Sbjct: 485 RLNSTVRRLNLSHNSFGDMGASYLADYIASNSTMLELNLSSCTIGNRGAHRLCEALATNQ 544

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            +  L L    +   G   +  +LR NNT+  L L 
Sbjct: 545 TLQLLDLSNNMMDGDGLSALLRVLRENNTLRELKLE 580



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 169/415 (40%), Gaps = 73/415 (17%)

Query: 172  RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL-QSNIALKTLNLSGNPI 230
            R   D  +  +  +L  N   E +  + N I   G  A   +L Q    ++T+NLS NPI
Sbjct: 631  RVIDDLSVSTICTALNNNTFVEVIDLSGNHIGENGCAALAAMLSQRTCKVRTINLSKNPI 690

Query: 231  GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSIL------------R 277
             D+ V  L D   +   +  + L + ++ D G + +A+ L KN SI+            +
Sbjct: 691  DDDAVAKLVDGFPNTKTLREVLLYNTNITDLGIEILAKGLEKNQSIVWIGVADDDAVSKQ 750

Query: 278  VLELNNNMIDYSGFTSL--------AEALLEN--------------------------ST 303
            V  L  N+   +G T L        A A+LE+                            
Sbjct: 751  VSLLKRNLALNTGPTELKHIILSIDAGAVLEDVDMSRPIDCSLDDSMCQFLCASLVGSRM 810

Query: 304  IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
            +RSL L+ N   +     + + +E   SL  L L  N I + G + +++ L  R   L  
Sbjct: 811  LRSLKLSHNTLSSACVPYIVEVVELCPSLVSLDLSDNQIDESGAQQIIACLE-RVSHLRS 869

Query: 364  LDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYM---------NDIG-----------DE 402
            +D+ NN  S +    V+  +  N  S +   L++          DI            DE
Sbjct: 870  VDVTNNLFSPQSLERVSHLVSLNLGSEVLKKLHLATARGEALPKDIDLNGVTNSYKLTDE 929

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
                +A  L+    + ++DL  NN    G  AIA VL+ N  + +L+L  N IGA+G  A
Sbjct: 930  DVVILAGILQDCSVVKSLDLSSNNFSDAGCIAIAEVLRVNHALEALNLTGNAIGANGGAA 989

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI--SILDLRANGLRDEV 515
            L   LK +  +  + L    I     E +A +L  N T   +++D+R   L DEV
Sbjct: 990  LYFALKVNPQLQHIWLENTAIPREILEDIASLLHVNQTPYRAVIDMRDVKL-DEV 1043



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 50/275 (18%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +A+ +  +S+++ L ++N ++D +G   L++AL +NST++ + L   +  A G   L   
Sbjct: 319 LADFIAASSVIQHLNISNTLVDDAGLKLLSDALQKNSTLKVIELANCHVTAAGIQTLFVV 378

Query: 326 L-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNSISAKGAFHVAEYI 383
           L +G  ++ E+++  NS+ D+ ++ + + L +   KL  L++  N +ISA     +A   
Sbjct: 379 LAKGKCAVEEVNIANNSLDDDSVQFITAALRANP-KLTTLNVDVNPAISAASMQEIAGLT 437

Query: 384 -----------------KNCKSLL----------------WI--------------NLYM 396
                             NCK ++                W+              NL  
Sbjct: 438 MVNRAPPRIRSVLPSIENNCKDVVSVDFSGNDVTLNDDSVWVLAQALRLNSTVRRLNLSH 497

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N  GD GA  +AD +  N T+  ++L    I ++GA  +   L  N  +  LDL+ N + 
Sbjct: 498 NSFGDMGASYLADYIASNSTMLELNLSSCTIGNRGAHRLCEALATNQTLQLLDLSNNMMD 557

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
            DG  AL  VL+ +  +  LKL   ++ A   E V
Sbjct: 558 GDGLSALLRVLRENNTLRELKLERTRVPAEFVERV 592



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 34/281 (12%)

Query: 360 KLAVLDIGNNSISAK------------GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           K AV+ + NNS +A+              +H+A++I     +  +N+    + D G + +
Sbjct: 288 KRAVVALRNNSSAAQEINLQWDAPLPTCMYHLADFIAASSVIQHLNISNTLVDDAGLKLL 347

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEV 466
           +DAL++N T+  I+L   ++ + G   +  VL K    +  +++A N +  D  + ++  
Sbjct: 348 SDALQKNSTLKVIELANCHVTAAGIQTLFVVLAKGKCAVEEVNIANNSLDDDSVQFITAA 407

Query: 467 LKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTI----SILDLRANGLRDEVC---SG 518
           L+ +  + TL +     I A+  + +A +   N       S+L    N  +D V    SG
Sbjct: 408 LRANPKLTTLNVDVNPAISAASMQEIAGLTMVNRAPPRIRSVLPSIENNCKDVVSVDFSG 467

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTSIDLAF 569
            N ++    +++ L   L  +  +  L          GA  LA  +   N  +  ++L+ 
Sbjct: 468 -NDVTLNDDSVWVLAQALRLNSTVRRLNLSHNSFGDMGASYLAD-YIASNSTMLELNLSS 525

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
             I + GA  + +AL  N+ + +  L+L+NN +   G SAL
Sbjct: 526 CTIGNRGAHRLCEALATNQTLQL--LDLSNNMMDGDGLSAL 564



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 139  LSGFTG--KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
            L+G T   KL  E    L    ++     S+D+S  NF D G   +AE L  N   E ++
Sbjct: 917  LNGVTNSYKLTDEDVVILAGILQDCSVVKSLDLSSNNFSDAGCIAIAEVLRVNHALEALN 976

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
               N I A G  A    L+ N  L+ + L    I  E ++ +  +L  N    R   + +
Sbjct: 977  LTGNAIGANGGAALYFALKVNPQLQHIWLENTAIPREILEDIASLLHVNQTPYR---AVI 1033

Query: 257  DLRD 260
            D+RD
Sbjct: 1034 DMRD 1037


>gi|119624671|gb|EAX04266.1| hypothetical protein MGC33600 [Homo sapiens]
          Length = 521

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 277 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 336

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 337 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 394

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 395 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 454

Query: 460 AKALSE 465
            K L E
Sbjct: 455 GKQLLE 460



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 292 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 344

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 345 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 403

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 404 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 462

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 463 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 494



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L+ N+I   G    A+ LL +S +R L+L
Sbjct: 305 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAK-LLSHSRLRVLNL 361

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 362 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 420

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 421 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 480

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 481 ESEYLIGQALYAN 493



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 290 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 348

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 349 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 407

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 408 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 467

Query: 501 ISILDLRANGLRDE 514
           +   DLR + +  E
Sbjct: 468 LLEFDLRLSDVAQE 481



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 313 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 371

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 372 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 431

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 432 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 481



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 269 VKDCGMNFEWNLFLFTYRD--CLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 326

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 327 PVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 385

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 386 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 439

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 440 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 477


>gi|291410201|ref|XP_002721391.1| PREDICTED: nucleotide-binding oligomerization domain containing 2
            [Oryctolagus cuniculus]
          Length = 1056

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 139/272 (51%), Gaps = 4/272 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    VE L+L+   +      A+A +L++      L+L++N +   G   L   L    
Sbjct: 775  VRGLNVEHLKLTFCGVGPAECAALAFVLRHLRRPVALQLDHNSVGDIGVEQLLPCL---G 831

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 832  ACKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLLACKQNFLA 891

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN I+A+GA  +AE +++  SL ++  + N +GD+GA+ +A+AL  ++++  + L
Sbjct: 892  -LRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWLSL 950

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L+ N  +  L L  N +   G  +L+E LK + ++  LKL    
Sbjct: 951  VGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSNNC 1010

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            I   GAE +   L  N+TI  + LR N    E
Sbjct: 1011 ITFVGAEALLQALASNDTILEVWLRGNPFSPE 1042



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 124/273 (45%), Gaps = 4/273 (1%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
            E +     G+  A   A   VL+       L L  N +GD GV+ L   L      + L 
Sbjct: 781  EHLKLTFCGVGPAECAALAFVLRHLRRPVALQLDHNSVGDIGVEQLLPCL---GACKALY 837

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D G   + E   +   L+ L L NN +      S+A+ L       +L L  N
Sbjct: 838  LRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLLACKQNFLALRLGNN 897

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL  N SL+ L   GN +GD+G +AL   LS  +  L  L +  N+I 
Sbjct: 898  HITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQS-LKWLSLVGNNIG 956

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++   +L  + L  N + D G   +A+ LK+N ++  + L  N I   GA
Sbjct: 957  SVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSNNCITFVGA 1016

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             A+ + L  N  I  + L  NP   +  +ALS 
Sbjct: 1017 EALLQALASNDTILEVWLRGNPFSPEEMEALSH 1049



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 4/180 (2%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITA G +     L+ N +L+ L   GN +GD+G + L + 
Sbjct: 879  VAQLLACKQNFLALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEA 938

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  ++ L L   ++   GA+A+A +L+ N  L  L L  N +  +G  SLAE L  N
Sbjct: 939  LSDHQSLKWLSLVGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRN 998

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            S+++ L L+ N    +GA AL + L  N ++ E+ L GN    E     M  LS R  +L
Sbjct: 999  SSLKVLKLSNNCITFVGAEALLQALASNDTILEVWLRGNPFSPEE----MEALSHRDSRL 1054



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 79/149 (53%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +   EG   LAE L  N + + + F  N +   G +A    L  + +LK L
Sbjct: 889  FLALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWL 948

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+D G  ++AE LK NS L+VL+L+N
Sbjct: 949  SLVGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSN 1008

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I + G  +L +AL  N TI  + L GN
Sbjct: 1009 NCITFVGAEALLQALASNDTILEVWLRGN 1037



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            L A  ++ +   N  D G+  L E   + +  ++++   N +T     +   +L      
Sbjct: 830  LGACKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLLACKQNF 889

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
              L L  N I  EG + L + L DN+ ++ L      + D+GA+A+AE L ++  L+ L 
Sbjct: 890  LALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWLS 949

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L  N I   G  +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N
Sbjct: 950  LVGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSNN 1009

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             I   G  AL+  L+S    L V   GN
Sbjct: 1010 CITFVGAEALLQALASNDTILEVWLRGN 1037



 Score = 39.7 bits (91), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 1/129 (0%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G K+  +  Q L E   + ++   + + G N G  G   LA  L  N   EE+    
Sbjct: 921  GFWGNKVGDKGAQALAEALSDHQSLKWLSLVGNNIGSVGAQALASMLEKNVALEELCLEE 980

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N +  AG+ +    L+ N +LK L LS N I   G + L   L  N  +  + L      
Sbjct: 981  NHLQDAGVCSLAEGLKRNSSLKVLKLSNNCITFVGAEALLQALASNDTILEVWLRGNPFS 1040

Query: 260  DEGAKAIAE 268
             E  +A++ 
Sbjct: 1041 PEEMEALSH 1049


>gi|114607607|ref|XP_518509.2| PREDICTED: T-complex-associated testis-expressed protein 1 [Pan
           troglodytes]
          Length = 501

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  N+
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANQ 474



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L+ N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAK-LLSHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDE 514
           +   DLR + +  E
Sbjct: 448 LLEFDLRLSDVAQE 461



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 266 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGAR 325

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 326 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 384

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY--LQGAKCL 551
            L+ N  ++ L L  N L +   +  + +   ++ + S+      +L  N+  L G K L
Sbjct: 385 ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSI------NLSCNHIGLDGGKQL 438

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
            +     N+ L   DL  +++  +  + I QAL AN++ A
Sbjct: 439 LEGMSD-NKTLLEFDLRLSDVAQESEYLIGQALYANQEAA 477



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457


>gi|290970785|ref|XP_002668255.1| predicted protein [Naegleria gruberi]
 gi|284081550|gb|EFC35511.1| predicted protein [Naegleria gruberi]
          Length = 295

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 167/331 (50%), Gaps = 67/331 (20%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           ++  +S++++  N GDEG+  ++E      T+ ++++  N I   G K    + Q    L
Sbjct: 1   MKQLTSLNINYNNIGDEGVKLISEM--KQLTSLDINY--NNIGVEGAKYISEMKQ----L 52

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNSI 275
            +L++S N IG EGVK +          E  QL+S+++R      EGAK I+E+ +    
Sbjct: 53  TSLDISDNNIGVEGVKLIS---------EMKQLTSLNIRINEIGVEGAKYISEMKQ---- 99

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L++N N I   G    A+ + E   + SL ++ N  G  GA  +++     K L  L
Sbjct: 100 LTSLDINCNNIGVEG----AKYISEMKQLTSLDISWNNIGVEGAKLISEM----KQLTSL 151

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-------------- 381
           ++  N IGDEG + +     S   +L  L+I +N+I  +GA  ++E              
Sbjct: 152 NIRRNEIGDEGAKYI-----SEMKQLTSLNISDNNIGVEGAKLISEMKQLTSLNINWNEI 206

Query: 382 ------YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
                 YI   K L  +N+  N IGDEGA+ I++ +KQ   +T++D+  N I  +GA  I
Sbjct: 207 GDEGAKYISEMKQLTSLNISWNKIGDEGAKYISE-MKQ---LTSLDINWNKIGVEGAKLI 262

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + + +    +TSL++  N IG +GAK LSE+
Sbjct: 263 SEMKQ----LTSLNINDNNIGVEGAKYLSEM 289



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 163/311 (52%), Gaps = 68/311 (21%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY------- 382
           K L  L+++ N+IGDEG++     L S   +L  LDI  N+I  +GA +++E        
Sbjct: 2   KQLTSLNINYNNIGDEGVK-----LISEMKQLTSLDINYNNIGVEGAKYISEMKQLTSLD 56

Query: 383 -------------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
                        I   K L  +N+ +N+IG EGA+ I++ +KQ   +T++D+  NNI  
Sbjct: 57  ISDNNIGVEGVKLISEMKQLTSLNIRINEIGVEGAKYISE-MKQ---LTSLDINCNNIGV 112

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           +GA  I+ + +    +TSLD+++N IG +GAK +SE+ +      +L +   +IG  GA+
Sbjct: 113 EGAKYISEMKQ----LTSLDISWNNIGVEGAKLISEMKQLT----SLNIRRNEIGDEGAK 164

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY----L 545
           ++++M +    ++ L++  N +      G  G       I  +K +   SL IN+     
Sbjct: 165 YISEMKQ----LTSLNISDNNI------GVEGAKL----ISEMKQLT--SLNINWNEIGD 208

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
           +GAK +++      + LTS+++++N+I D+GA  I++  +      +TSL++  N +   
Sbjct: 209 EGAKYISEM-----KQLTSLNISWNKIGDEGAKYISEMKQ------LTSLDINWNKIGVE 257

Query: 606 GQSALTDAKDL 616
           G   +++ K L
Sbjct: 258 GAKLISEMKQL 268



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 49/274 (17%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           ++  E++  +S+D+S  N G EG+  ++E     +    ++   N I   G K    + Q
Sbjct: 44  KYISEMKQLTSLDISDNNIGVEGVKLISEM----KQLTSLNIRINEIGVEGAKYISEMKQ 99

Query: 216 SNIALKTLNLSGNPIGDEGVKCLC--------DILVDNAGV-------ERLQLSSVDLR- 259
               L +L+++ N IG EG K +         DI  +N GV       E  QL+S+++R 
Sbjct: 100 ----LTSLDINCNNIGVEGAKYISEMKQLTSLDISWNNIGVEGAKLISEMKQLTSLNIRR 155

Query: 260 ----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
               DEGAK I+E+ +    L  L +++N I   G    A+ + E   + SL++N N  G
Sbjct: 156 NEIGDEGAKYISEMKQ----LTSLNISDNNIGVEG----AKLISEMKQLTSLNINWNEIG 207

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA  +++     K L  L++  N IGDEG + +     S   +L  LDI  N I  +G
Sbjct: 208 DEGAKYISEM----KQLTSLNISWNKIGDEGAKYI-----SEMKQLTSLDINWNKIGVEG 258

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           A  ++E     K L  +N+  N+IG EGA+ +++
Sbjct: 259 AKLISE----MKQLTSLNINDNNIGVEGAKYLSE 288


>gi|397526737|ref|XP_003833274.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Pan
           paniscus]
          Length = 501

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  N+
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANQ 474



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L+ N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAK-LLSHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDE 514
           +   DLR + +  E
Sbjct: 448 LLEFDLRLSDVAQE 461



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 266 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGAR 325

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 326 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 384

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY--LQGAKCL 551
            L+ N  ++ L L  N L +   +  + +   ++ + S+      +L  N+  L G K L
Sbjct: 385 ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSI------NLSCNHIGLDGGKQL 438

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
            +     N+ L   DL  +++  +  + I QAL AN++ A
Sbjct: 439 LEGMSD-NKTLLEFDLRLSDVAQESEYLIGQALYANQEAA 477



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457


>gi|405963904|gb|EKC29436.1| hypothetical protein CGI_10023826 [Crassostrea gigas]
          Length = 592

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 8/246 (3%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G  G   +A+++  N+   E+    N I   G +     L+ N  ++ L+L GN   +E
Sbjct: 199 LGGYGAKCIADAITRNEYLTEIRIVENNIGTEGARVICDALRKNNYVRRLDLKGNGFHEE 258

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
             K   D+L +N  +  L LS    ++ G +  A+ L NN  LRVL+L+ N +   G  +
Sbjct: 259 DAKYFKDMLDENHALRELYLSHNKFQELGGEIFADGLANNDFLRVLDLSWNHLRMRGAMA 318

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +  AL  N  +  L ++ N     GA  +++ LE N +L EL+L  N + D  I+ L++G
Sbjct: 319 IGSALQVNRHLEKLDISWNGFHIRGALTISRALEINTTLLELNLSCNRLSDGCIQILVNG 378

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD----EGAEKIAD 409
           L  +   L VL I  N I   GAF + E I+N  S   I L + D+GD    +  EK+  
Sbjct: 379 L-KKNSNLKVLRIAQNQIYPPGAFKILESIENTPS---IALELLDLGDTPVMDTFEKLYK 434

Query: 410 ALKQNR 415
            L++ R
Sbjct: 435 KLQEIR 440



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 3/244 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  ++TL L  N +G  G KC+ D +  N  +  +++   ++  EGA+ I + L+ N
Sbjct: 183 LVRNSIVETLILESNELGGYGAKCIADAITRNEYLTEIRIVENNIGTEGARVICDALRKN 242

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +R L+L  N           + L EN  +R L+L+ N    LG    A GL  N  LR
Sbjct: 243 NYVRRLDLKGNGFHEEDAKYFKDMLDENHALRELYLSHNKFQELGGEIFADGLANNDFLR 302

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N +   G  A+ S L   +  L  LDI  N    +GA  ++  ++   +LL +N
Sbjct: 303 VLDLSWNHLRMRGAMAIGSALQVNR-HLEKLDISWNGFHIRGALTISRALEINTTLLELN 361

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT--SLDLA 451
           L  N + D   + + + LK+N  +  + +  N I+  GA  I   +++   I    LDL 
Sbjct: 362 LSCNRLSDGCIQILVNGLKKNSNLKVLRIAQNQIYPPGAFKILESIENTPSIALELLDLG 421

Query: 452 YNPI 455
             P+
Sbjct: 422 DTPV 425



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            +RL +  V L+   +KA A  L  NSI+  L L +N +   G   +A+A+  N  +  +
Sbjct: 161 TDRLAVVGVILKKNESKACAIGLVRNSIVETLILESNELGGYGAKCIADAITRNEYLTEI 220

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +  N  G  GA  +   L  N  +R L L GN   +E  +     L      L  L + 
Sbjct: 221 RIVENNIGTEGARVICDALRKNNYVRRLDLKGNGFHEEDAKYFKDMLDENHA-LRELYLS 279

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N     G    A+ + N   L  ++L  N +   GA  I  AL+ NR +  +D+  N  
Sbjct: 280 HNKFQELGGEIFADGLANNDFLRVLDLSWNHLRMRGAMAIGSALQVNRHLEKLDISWNGF 339

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           H +GA  I+R L+ N+ +  L+L+ N +     + L   LK + N+  L++   QI   G
Sbjct: 340 HIRGALTISRALEINTTLLELNLSCNRLSDGCIQILVNGLKKNSNLKVLRIAQNQIYPPG 399

Query: 488 A 488
           A
Sbjct: 400 A 400



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 9/245 (3%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R   +  L + +N +   GA  +A+ I   + L  I +  N+IG EGA  I DAL++N  
Sbjct: 185 RNSIVETLILESNELGGYGAKCIADAITRNEYLTEIRIVENNIGTEGARVICDALRKNNY 244

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  +DL GN  H + A     +L +N  +  L L++N     G +  ++ L  +  +  L
Sbjct: 245 VRRLDLKGNGFHEEDAKYFKDMLDENHALRELYLSHNKFQELGGEIFADGLANNDFLRVL 304

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L W  +   GA  +   L+ N  +  LD+  NG          G      A+     +L
Sbjct: 305 DLSWNHLRMRGAMAIGSALQVNRHLEKLDISWNGFH------IRGALTISRALEINTTLL 358

Query: 537 FYSLCINYLQGA--KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
             +L  N L     + L    K  N  L  + +A N+I   GAF I ++++    +A+  
Sbjct: 359 ELNLSCNRLSDGCIQILVNGLK-KNSNLKVLRIAQNQIYPPGAFKILESIENTPSIALEL 417

Query: 595 LNLAN 599
           L+L +
Sbjct: 418 LDLGD 422


>gi|189502564|ref|YP_001958281.1| hypothetical protein Aasi_1227 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498005|gb|ACE06552.1| hypothetical protein Aasi_1227 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 430

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 139/269 (51%), Gaps = 44/269 (16%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +  ++L GN IGD+G+   +  L   +  +  +D+  N I  +G   +A++++  + +  
Sbjct: 185 VHTVYLSGNKIGDQGVEGFVKNLQGTQ--VHTVDLSVNEIGDQGVEGLAKHLQGTR-VHT 241

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL  N IGD+GAE  A  L+  R + T+DL  N I ++GA  +A+ L+  +V T +DL+
Sbjct: 242 VNLSGNYIGDQGAEGFAKHLQGTR-VHTVDLSENEIGAQGAVGLAKYLQGTNVHT-VDLS 299

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IGA GA++ + +L+    ++T+ L   +IGA GA  +A  L+  N +  +DL  N +
Sbjct: 300 ANQIGAQGAESFARLLQG-TRVHTVDLSRNEIGAQGAVGLAKYLQGTN-VHTVDLSNNEI 357

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            D+   G  G S                    +LQG +            + ++DL++NE
Sbjct: 358 GDQ---GAEGFS-------------------KHLQGTR------------VHTVDLSYNE 383

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANN 600
           I D GA A+A+ L+      V ++NL +N
Sbjct: 384 IGDQGAEALAKHLQGTR---VHTVNLRSN 409



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 65/296 (21%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + T+ LSGN IGD+GV+     L     V  + LS  ++ D+G + +A+ L         
Sbjct: 185 VHTVYLSGNKIGDQGVEGFVKNL-QGTQVHTVDLSVNEIGDQGVEGLAKHL--------- 234

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
                               + + + +++L+GNY G  GA   AK L+G           
Sbjct: 235 --------------------QGTRVHTVNLSGNYIGDQGAEGFAKHLQGT---------- 264

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
                               ++  +D+  N I A+GA  +A+Y++   ++  ++L  N I
Sbjct: 265 --------------------RVHTVDLSENEIGAQGAVGLAKYLQGT-NVHTVDLSANQI 303

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G +GAE  A  L+  R + T+DL  N I ++GA  +A+ L+  +V T +DL+ N IG  G
Sbjct: 304 GAQGAESFARLLQGTR-VHTVDLSRNEIGAQGAVGLAKYLQGTNVHT-VDLSNNEIGDQG 361

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           A+  S+ L+    ++T+ L + +IG  GAE +A  L+    +  ++LR+N +  +V
Sbjct: 362 AEGFSKHLQG-TRVHTVDLSYNEIGDQGAEALAKHLQ-GTRVHTVNLRSNNIGPDV 415



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 38/276 (13%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +T   + +E R  + V +SG   GD+G+    ++L   Q    V  + N I   G++   
Sbjct: 174 RTFWPYLQEARVHT-VYLSGNKIGDQGVEGFVKNLQGTQ-VHTVDLSVNEIGDQGVEGLA 231

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             LQ    + T+NLSGN IGD+G +     L     V  + LS  ++  +GA  +A+ L+
Sbjct: 232 KHLQGT-RVHTVNLSGNYIGDQGAEGFAKHL-QGTRVHTVDLSENEIGAQGAVGLAKYLQ 289

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             ++   ++L+ N I   G  S A  LL+ + + ++ L+ N  GA GA  LAK L+G   
Sbjct: 290 GTNV-HTVDLSANQIGAQGAESFAR-LLQGTRVHTVDLSRNEIGAQGAVGLAKYLQGT-- 345

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
                                        +  +D+ NN I  +GA   +++++  + +  
Sbjct: 346 ----------------------------NVHTVDLSNNEIGDQGAEGFSKHLQGTR-VHT 376

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           ++L  N+IGD+GAE +A  L+  R + T++L  NNI
Sbjct: 377 VDLSYNEIGDQGAEALAKHLQGTR-VHTVNLRSNNI 411


>gi|444725041|gb|ELW65621.1| T-complex-associated testis-expressed protein 1 [Tupaia chinensis]
          Length = 553

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 98/186 (52%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  +  L EL L  
Sbjct: 310 EWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSQLDDDKARILIRSLLDHPVLEELDLSH 369

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +   L+ +NL +N I
Sbjct: 370 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNCI 427

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +A+VL  N+ +TS++L+ N IG DG
Sbjct: 428 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLAQVLAINTTLTSINLSCNHIGLDG 487

Query: 460 AKALSE 465
            K L E
Sbjct: 488 GKQLLE 493



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 325 AATIKACH-------TLKIFRLTRSQLDDDKARILIRSLLDHPVLEELDLSHNLIGDRGA 377

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 378 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNCIEDEGGQALA 436

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L++ + +    L  +++  N I   G   + E +
Sbjct: 437 HALQTNKCLTTLHLGGNELS-EPTATLLAQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 495

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 496 SDNKTLLEFDLRLSDVAQESEYLIGQALHANR 527



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA  
Sbjct: 321 CHSLAATIKACHTLKIFRLTRSQLDDDKARILIRSLLDHP-VLEELDLSHNLIGDRGARG 379

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 380 AAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNCIEDEGGQALAHA 438

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  L++VL  +  + ++ L    IG  G + + + +  N
Sbjct: 439 LQTNKCLTTLHLGGNELSEPTATLLAQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 498

Query: 499 NTISILDLRANGLRDE 514
            T+   DLR + +  E
Sbjct: 499 KTLLEFDLRLSDVAQE 514



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 309 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSQLDDDKARILIRSLLDHPVLEELDLS 368

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 369 HNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNCI 427

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T LA+ L  N+T+ S++L+ N+ G  G
Sbjct: 428 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLAQVLAINTTLTSINLSCNHIGLDG 487

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 488 GKQLLEGMSDNKTLLEFDLRLSDVAQE 514



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 12/219 (5%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 302 VKDCGMNFEWNLFLFTYRD--CHSLAATIKACHTLKIFRLTRSQLDDDKARILIRSLLDH 359

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 360 PVLEELDLSHNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTHLV 418

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNE 560
            L+LR N + DE      G +  H A+ + K +    L  N L    A  LAQ    +N 
Sbjct: 419 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLAQVL-AINT 471

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 472 TLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 510


>gi|118384891|ref|XP_001025584.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89307351|gb|EAS05339.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 409

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 149/292 (51%), Gaps = 6/292 (2%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           LN S   + D+ +  LC+ L ++  + R + LS   + D GA+++A+L+ N   L  L L
Sbjct: 62  LNFSSR-LRDKDLIILCETLQESGEIIRHIDLSYNLITDTGAESLAQLIGNCPYLESLNL 120

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I+ +G   LA  L EN ++R L+L  N     GA  + + L  NK+L EL+L  N 
Sbjct: 121 QGNDIETAGSQELANHLKENFSLRYLNLESNKIRTNGAMNIIEILFTNKNLIELNLGDND 180

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGN---NSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           I  +G+  + S L+ +   LAVL++      SI  + A H A+ +++ +S+  ++L  + 
Sbjct: 181 ITHDGMIGITSVLNYQNNTLAVLNVDRPTYTSIGQETAIHFAKMLQSNRSVEKLSLQKHA 240

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGA 457
              E    I + L +N  +  +DL  N I  KG  A+A+ L  +   + SL LA N  G 
Sbjct: 241 FNCEAIYTITEHLLENNKLRVLDLTANKISFKGCEALAKYLCSEYCALESLILASNRTGH 300

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            GAK +++ L    ++  L +    I  +G + +A+ L  N+++  L L  N
Sbjct: 301 YGAKVIAQALSKTRSLVHLDMTRNDIDDNGLKMIAESLETNDSLISLKLYWN 352



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 41/285 (14%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+  N I+  GA  +A+ I NC  L  +NL  NDI   G++++A+ LK+N ++  ++L 
Sbjct: 90  IDLSYNLITDTGAESLAQLIGNCPYLESLNLQGNDIETAGSQELANHLKENFSLRYLNLE 149

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN----INTLKLG 479
            N I + GA  I  +L  N  +  L+L  N I  DG   ++ VL +  N    +N  +  
Sbjct: 150 SNKIRTNGAMNIIEILFTNKNLIELNLGDNDITHDGMIGITSVLNYQNNTLAVLNVDRPT 209

Query: 480 WCQIGASGAEFVADMLR----------------------------YNNTISILDLRANGL 511
           +  IG   A   A ML+                             NN + +LDL AN +
Sbjct: 210 YTSIGQETAIHFAKMLQSNRSVEKLSLQKHAFNCEAIYTITEHLLENNKLRVLDLTANKI 269

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
                 GC  L+ +  + Y     L  +       GAK +AQ+      +L  +D+  N+
Sbjct: 270 S---FKGCEALAKYLCSEYCALESLILASNRTGHYGAKVIAQALSKT-RSLVHLDMTRND 325

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           I D+G   IA++L+ N+  ++ SL L   +   FGQ AL +   L
Sbjct: 326 IDDNGLKMIAESLETND--SLISLKL---YWNHFGQMALQEFHKL 365



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 17/284 (5%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +TL E  + +R    +D+S     D G   LA+ +G     E ++   N I  AG +   
Sbjct: 78  ETLQESGEIIR---HIDLSYNLITDTGAESLAQLIGNCPYLESLNLQGNDIETAGSQELA 134

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N +L+ LNL  N I   G   + +IL  N  +  L L   D+  +G   I  +L 
Sbjct: 135 NHLKENFSLRYLNLESNKIRTNGAMNIIEILFTNKNLIELNLGDNDITHDGMIGITSVLN 194

Query: 272 -NNSILRVLELNNNMIDYSGFTSL--------AEALLENSTIRSLHLNGNYGGALGANAL 322
             N+ L VL      +D   +TS+        A+ L  N ++  L L  +         +
Sbjct: 195 YQNNTLAVLN-----VDRPTYTSIGQETAIHFAKMLQSNRSVEKLSLQKHAFNCEAIYTI 249

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            + L  N  LR L L  N I  +G  AL   L S    L  L + +N     GA  +A+ 
Sbjct: 250 TEHLLENNKLRVLDLTANKISFKGCEALAKYLCSEYCALESLILASNRTGHYGAKVIAQA 309

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           +   +SL+ +++  NDI D G + IA++L+ N ++ ++ L  N+
Sbjct: 310 LSKTRSLVHLDMTRNDIDDNGLKMIAESLETNDSLISLKLYWNH 353



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 1/152 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G E     A+ L  N++ E++S   +      I      L  N  L+ L+L+ N I  +
Sbjct: 213 IGQETAIHFAKMLQSNRSVEKLSLQKHAFNCEAIYTITEHLLENNKLRVLDLTANKISFK 272

Query: 234 GVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           G + L   L  +   +E L L+S      GAK IA+ L     L  L++  N ID +G  
Sbjct: 273 GCEALAKYLCSEYCALESLILASNRTGHYGAKVIAQALSKTRSLVHLDMTRNDIDDNGLK 332

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +AE+L  N ++ SL L  N+ G +      K
Sbjct: 333 MIAESLETNDSLISLKLYWNHFGQMALQEFHK 364


>gi|229577123|ref|NP_872345.2| T-complex-associated testis-expressed protein 1 [Homo sapiens]
 gi|74755678|sp|Q5JU00.1|TCTE1_HUMAN RecName: Full=T-complex-associated testis-expressed protein 1;
           Short=Tcte-1
          Length = 501

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L+ N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAK-LLSHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDE 514
           +   DLR + +  E
Sbjct: 448 LLEFDLRLSDVAQE 461



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457


>gi|399497986|emb|CCG20321.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  + I+A+
Sbjct: 339 GPEAGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGSDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ D GA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDGGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEAGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFK 556
            ++++L++  + +  E  S           +  L      SL  N L+  GA  +A++ +
Sbjct: 383 PSLAVLEMAGSDITAEAASAIASCIAAKQLLAKL------SLGENELKDGGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/341 (20%), Positives = 131/341 (38%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGADAARIADPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    E     C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEAGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +G   +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGVIAIANALKDSAPSLAVLEMAGSDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDGGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEA 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEG  AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGSDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDGGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|23273930|gb|AAH35022.1| T-complex-associated-testis-expressed 1 [Homo sapiens]
 gi|123981216|gb|ABM82437.1| hypothetical protein MGC33600 [synthetic construct]
 gi|123996053|gb|ABM85628.1| hypothetical protein MGC33600 [synthetic construct]
          Length = 501

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L+ N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAK-LLSHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDE 514
           +   DLR + +  E
Sbjct: 448 LLEFDLRLSDVAQE 461



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457


>gi|426367312|ref|XP_004050677.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14
           [Gorilla gorilla gorilla]
          Length = 1093

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 18/328 (5%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRHCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEVCSGCNGLSF----FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            LDL +N L+D      NG+      F     +L+ +     C+  L  A CL  +  ++
Sbjct: 904 HLDLGSNWLQD------NGVKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVIL 954

Query: 559 NEA-LTSIDLAFNEIRDDGAFAIAQALK 585
           N   L S+DL  N+++DDG   +  AL+
Sbjct: 955 NNPNLRSLDLGNNDLQDDGVKILCDALR 982



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 6/311 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L + +   ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRHCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGL 511
            +  ++L  N L
Sbjct: 1016 LIKMNLTQNTL 1026



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 60/258 (23%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L + +   E +S  + G+T AG +     L SN  L  L L
Sbjct: 791  LNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCL 850

Query: 226  SGNPIGDEGVKCLCDI-----------------------------LVDNAGVERLQLSSV 256
            + N +GD GVK + D                              L+ N  +  L L S 
Sbjct: 851  ADNVLGDGGVKLMSDALQHAQCTLKSLVLRHCHFTSLSSEYLSTSLLHNKSLTHLDLGSN 910

Query: 257  DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--- 312
             L+D G K + ++ ++ S  L+ LEL   ++  +    LA  +L N  +RSL L  N   
Sbjct: 911  WLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQ 970

Query: 313  ------------------------YGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                                    Y G  +L    L+  L  NK L +++L  N++G EG
Sbjct: 971  DDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEG 1030

Query: 347  IRALMSGLSSRKGKLAVL 364
            I  L   L S K KL VL
Sbjct: 1031 IVKLYKVLKSPKCKLQVL 1048


>gi|357139672|ref|XP_003571403.1| PREDICTED: RAN GTPase-activating protein 1-like [Brachypodium
           distachyon]
          Length = 539

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 165/360 (45%), Gaps = 37/360 (10%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFF---LAESLGYNQTAEEVS-FAANGITA 204
           E+K+ L    K   ++  +  S R+FG +       + ES+    T  ++S F A     
Sbjct: 136 EAKELLIPLTKPGNSYKRICFSNRSFGIDAANVAGPILESIKKQITEVDISDFVAGRPED 195

Query: 205 AGI---KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             +   + F   L+ ++ L+ LN+S N +G++GV+   ++L     +E   + +  + +E
Sbjct: 196 EALDVMRIFSKALEGSV-LRYLNISDNALGEKGVRAFEELLKSQDNLEEFSVMNDGISEE 254

Query: 262 GAKAIAELLKNNSILRVLELNNNM----------------------------IDYSGFTS 293
            AKA++EL+ +  IL+VL  +NNM                            I   G  +
Sbjct: 255 AAKALSELIPSTEILKVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVA 314

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAEAL   + ++ L L  N  G     AL+K L     L EL+L   ++ ++G  A+ + 
Sbjct: 315 LAEALGTCTRLKKLDLRDNLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIAIANA 374

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L     +L VL++  N I+AK    +AE +   +SL  + L  N++ D GA  IA  L+ 
Sbjct: 375 LKQSAPRLEVLEMAGNEITAKATQALAECLTVMQSLKKLTLAENELEDRGAVVIAKTLEN 434

Query: 414 NRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +   +  +D+  N +   GA   A+ + D      L++  N I  +G + + ++LK   N
Sbjct: 435 SHPDLKELDVSTNMLRRAGARCFAQAIADKPGFVQLNINGNFISDEGIEEVKKILKSGKN 494



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 140/288 (48%), Gaps = 13/288 (4%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K LEG+  LR L++  N++G++G+RA    L S+   L    + N+ IS + A  ++E
Sbjct: 204 FSKALEGS-VLRYLNISDNALGEKGVRAFEELLKSQDN-LEEFSVMNDGISEEAAKALSE 261

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I + + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A+A  L  
Sbjct: 262 LIPSTEILKVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAEALGT 321

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT- 500
            + +  LDL  N  G +   ALS+ L    ++  L L    +   G   +A+ L+ +   
Sbjct: 322 CTRLKKLDLRDNLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIAIANALKQSAPR 381

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVV 558
           + +L++  N +          L+   + + SLK +   +L  N L+  GA  +A++ +  
Sbjct: 382 LEVLEMAGNEI---TAKATQALAECLTVMQSLKKL---TLAENELEDRGAVVIAKTLENS 435

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           +  L  +D++ N +R  GA   AQA+   +      LN+  NF++  G
Sbjct: 436 HPDLKELDVSTNMLRRAGARCFAQAIA--DKPGFVQLNINGNFISDEG 481



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 31/303 (10%)

Query: 144 GKLFRESKQTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           G+   E+   +  F+K L       +++S    G++G+    E L      EE S   +G
Sbjct: 191 GRPEDEALDVMRIFSKALEGSVLRYLNISDNALGEKGVRAFEELLKSQDNLEEFSVMNDG 250

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I+    KA   ++ S   LK L+   N  GDEG   + +++  ++ +E  + S+  +  +
Sbjct: 251 ISEEAAKALSELIPSTEILKVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSD 310

Query: 262 GAKAIAELLKNNSILRVLELNNNM----------------------------IDYSGFTS 293
           G  A+AE L   + L+ L+L +N+                            ++  G  +
Sbjct: 311 GGVALAEALGTCTRLKKLDLRDNLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIA 370

Query: 294 LAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +A AL +++  +  L + GN   A    ALA+ L   +SL++L L  N + D G   +  
Sbjct: 371 IANALKQSAPRLEVLEMAGNEITAKATQALAECLTVMQSLKKLTLAENELEDRGAVVIAK 430

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L +    L  LD+  N +   GA   A+ I +    + +N+  N I DEG E++   LK
Sbjct: 431 TLENSHPDLKELDVSTNMLRRAGARCFAQAIADKPGFVQLNINGNFISDEGIEEVKKILK 490

Query: 413 QNR 415
             +
Sbjct: 491 SGK 493



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 25/249 (10%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L ++N+  N +G++G     + LK    +    +  + I  + A A++ ++    ++  L
Sbjct: 213 LRYLNISDNALGEKGVRAFEELLKSQDNLEEFSVMNDGISEEAAKALSELIPSTEILKVL 272

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
               N  G +GA +++E++K   N+ + +    +IG+ G   +A+ L     +  LDLR 
Sbjct: 273 HFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRD 332

Query: 509 N---------------GLRDEVCSGCNGLSFFHSAIYSLKHMLFYS---LCINYLQGAKC 550
           N                L D V    + L+  +    ++ + L  S   L +  + G + 
Sbjct: 333 NLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIAIANALKQSAPRLEVLEMAGNEI 392

Query: 551 LAQSFKVVNEALT------SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            A++ + + E LT       + LA NE+ D GA  IA+ L+ N    +  L+++ N L +
Sbjct: 393 TAKATQALAECLTVMQSLKKLTLAENELEDRGAVVIAKTLE-NSHPDLKELDVSTNMLRR 451

Query: 605 FGQSALTDA 613
            G      A
Sbjct: 452 AGARCFAQA 460



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 92/220 (41%), Gaps = 30/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E    +A  I + G  A    L +   LK L+L  N  G E 
Sbjct: 280 GDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEA 339

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L     +  L LS ++L ++G  AIA  LK ++  L VLE+  N I      +
Sbjct: 340 GIALSKTLPKLPDLVELYLSDLNLENKGTIAIANALKQSAPRLEVLEMAGNEITAKATQA 399

Query: 294 LAEAL---------------------------LENS--TIRSLHLNGNYGGALGANALAK 324
           LAE L                           LENS   ++ L ++ N     GA   A+
Sbjct: 400 LAECLTVMQSLKKLTLAENELEDRGAVVIAKTLENSHPDLKELDVSTNMLRRAGARCFAQ 459

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            +       +L+++GN I DEGI  +   L S K  L+VL
Sbjct: 460 AIADKPGFVQLNINGNFISDEGIEEVKKILKSGKNSLSVL 499


>gi|426353363|ref|XP_004044166.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Gorilla
           gorilla gorilla]
          Length = 501

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLHHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+ +  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLHHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L+ N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLHHPVLEELDLSQNLIGDRGARGAAK-LLSHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLHHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDE 514
           +   DLR + +  E
Sbjct: 448 LLEFDLRLSDVAQE 461



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL ++   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLHHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L  +
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLHH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457


>gi|124430564|ref|NP_038716.2| T-complex-associated testis-expressed protein 1 [Mus musculus]
 gi|182701373|sp|A6H639.1|TCTE1_MOUSE RecName: Full=T-complex-associated testis-expressed protein 1;
           Short=Tcte-1
 gi|148691495|gb|EDL23442.1| t-complex-associated testis expressed 1 [Mus musculus]
 gi|148877765|gb|AAI45742.1| T-complex-associated testis expressed 1 [Mus musculus]
          Length = 498

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 2/219 (0%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 255 EWNLFLFTYRDCYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSH 314

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+++NL +N I
Sbjct: 315 NLIGDRGARAAAKLLS--HSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCI 372

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + IA AL+ N+ ++ + LGGN +    A+ ++++L  N+ + SL+L+ N IG DG
Sbjct: 373 EDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDG 432

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            K L E +  +  I    L    +       +  +L  N
Sbjct: 433 GKQLLEGISDNKTILEFDLRLSDVSQESEYLIGQVLHAN 471



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 270 AATIKACH-------TLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 322

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +   G  SLA AL  N+ +  L+L  N     G  A+A
Sbjct: 323 RAAAKLL-SHSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIA 381

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             LE NK L  LHL GN +  E    L+S + +    L  L++  N I   G   + E I
Sbjct: 382 HALETNKCLSVLHLGGNKLS-EPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGI 440

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K++L  +L ++D+  E    I   L  NR
Sbjct: 441 SDNKTILEFDLRLSDVSQESEYLIGQVLHANR 472



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    L  SL  +   EE+  + N I   G +A   +L S+  L+ LNL+ N +   G 
Sbjct: 291 DDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLL-SHSRLRVLNLANNQLQAPGA 349

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +AIA  L+ N  L VL L  N +     T L+
Sbjct: 350 QSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLS 409

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ SL+L+ N+ G  G   L +G+  NK++ E  L  + +  E
Sbjct: 410 QMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKTILEFDLRLSDVSQE 459



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA   A
Sbjct: 268 SLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPA-LEELDLSHNLIGDRGARAAA 326

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  +  ++L  N I  +G  AIA  L+
Sbjct: 327 KLLSHSR-LRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALE 385

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  ++ L L  N +    A  LS++L  +  + +L L    IG  G + + + +  N T
Sbjct: 386 TNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKT 445

Query: 501 ISILDLRANGLRDE 514
           I   DLR + +  E
Sbjct: 446 ILEFDLRLSDVSQE 459



 Score = 39.3 bits (90), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 43/98 (43%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DEG   +A +L  N+    +    N ++         +L  N  L +LNLS N IG +G 
Sbjct: 374 DEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGG 433

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           K L + + DN  +    L   D+  E    I ++L  N
Sbjct: 434 KQLLEGISDNKTILEFDLRLSDVSQESEYLIGQVLHAN 471


>gi|194377816|dbj|BAG63271.1| unnamed protein product [Homo sapiens]
          Length = 501

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L+ N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAK-LLSHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDE 514
           +   DLR + +  E
Sbjct: 448 LLEFDLRLSDVAQE 461



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457


>gi|443728681|gb|ELU14920.1| hypothetical protein CAPTEDRAFT_163530 [Capitella teleta]
          Length = 635

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 123/238 (51%), Gaps = 1/238 (0%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L++ ++ +   G   +A AL+ N+ +  L L  N+ G  G   L + L+ N  + EL L 
Sbjct: 238 LKMKHHGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLKENCYITELDLS 297

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G        S L++    L  + +  N +  K A ++A+ I N   L ++NL  N 
Sbjct: 298 DNQLGVSFAENFTSVLNN-NSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNK 356

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G+     +  A+ +N +I  +DL  N++  KGA A+A+ +K N ++ S++L++N +G D
Sbjct: 357 LGEVAGVALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGND 416

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           GAKAL + LK +  +  L +   +I   G+ F+   +  N ++ +L +  N ++   C
Sbjct: 417 GAKALGDALKVNSALEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAGC 474



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 31/274 (11%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L +  + +G +GVK +   LV N  V RL L+   L +EG + + E+LK N  +  L+L+
Sbjct: 238 LKMKHHGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLKENCYITELDLS 297

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N +  S   +    L  NST+  + L GN+     A  LA  +     L  L+L  N +
Sbjct: 298 DNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNKL 357

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G+    AL   ++     +  LD+  N +  KGA  VA+ IK+   +  +NL  N +G++
Sbjct: 358 GEVAGVALGPAIA-ENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGND 416

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGA----SAIA-----RVLK------------- 440
           GA+ + DALK N  +  +D+  N I ++G+      IA     +VLK             
Sbjct: 417 GAKALGDALKVNSALEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAGCYA 476

Query: 441 --------DNSVITSLDLAYNPIGADGAKALSEV 466
                    NS+ITS+D +   + +D    L +V
Sbjct: 477 ICAAMLKNPNSIITSIDFSDILVNSDFGDILKKV 510



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 31/253 (12%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+   G+K     L SN  +  L+L+ N +G+EG + LC++L +N  +  L LS   L 
Sbjct: 243 HGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLKENCYITELDLSDNQLG 302

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-------------------- 299
              A+    +L NNS L  + L  N +D      LA+A++                    
Sbjct: 303 VSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNKLGEVAG 362

Query: 300 --------ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
                   ENS+I+ L L+ N+    GA A+A+G++ N  ++ ++L  N +G++G +AL 
Sbjct: 363 VALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGNDGAKALG 422

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L      L  LDI NN I+ +G+  + + I   +SL  + +  N +   G   I  A+
Sbjct: 423 DALKVNSA-LEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAGCYAICAAM 481

Query: 412 --KQNRTITTIDL 422
               N  IT+ID 
Sbjct: 482 LKNPNSIITSIDF 494



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 130/276 (47%), Gaps = 16/276 (5%)

Query: 330 KSLRELHL----HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           + +++ HL    HG  +G +G++ +   L S    L  L + +N +  +G  H+ E +K 
Sbjct: 231 RHMKDSHLKMKHHG--LGPKGVKPIAVALVSNTCVLR-LSLTDNWLGNEGGRHLCEMLKE 287

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              +  ++L  N +G   AE     L  N T+T + L GN +  K A  +A  + + + +
Sbjct: 288 NCYITELDLSDNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTTRL 347

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             L+L+ N +G     AL   +  + +I  L L W  +   GA  VA  +++N  +  ++
Sbjct: 348 EYLNLSRNKLGEVAGVALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVN 407

Query: 506 LRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALT 563
           L  NG+ ++           +SA+  L       +  N +  +G+  L +    VNE+L 
Sbjct: 408 LSWNGVGNDGAKALGDALKVNSALEEL------DITNNRITTEGSVFLGKGI-AVNESLK 460

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            + +A N ++  G +AI  A+  N +  +TS++ ++
Sbjct: 461 VLKMARNPMQSAGCYAICAAMLKNPNSIITSIDFSD 496



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 9/185 (4%)

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           KG   IA  L  N+ +  L L  N +G +G + L E+LK +  I  L L   Q+G S AE
Sbjct: 248 KGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLKENCYITELDLSDNQLGVSFAE 307

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK 549
               +L  N+T++ + L  N L D+         +   AI +   + + +L  N L    
Sbjct: 308 NFTSVLNNNSTLTHVTLTGNFLDDKAAI------YLADAIMNTTRLEYLNLSRNKLGEVA 361

Query: 550 CLAQSFKVV-NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 608
            +A    +  N ++  +DL++N +R  GA A+AQ +K N  V + S+NL+ N +   G  
Sbjct: 362 GVALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHN--VLMQSVNLSWNGVGNDGAK 419

Query: 609 ALTDA 613
           AL DA
Sbjct: 420 ALGDA 424



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 2/210 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT-A 204
           L  E  + L E  KE    + +D+S    G          L  N T   V+   N +   
Sbjct: 273 LGNEGGRHLCEMLKENCYITELDLSDNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDK 332

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A I   D ++ +   L+ LNLS N +G+     L   + +N+ ++ L LS   LR +GA 
Sbjct: 333 AAIYLADAIMNT-TRLEYLNLSRNKLGEVAGVALGPAIAENSSIKHLDLSWNHLRRKGAI 391

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A+ +K+N +++ + L+ N +   G  +L +AL  NS +  L +  N     G+  L K
Sbjct: 392 AVAQGIKHNVLMQSVNLSWNGVGNDGAKALGDALKVNSALEELDITNNRITTEGSVFLGK 451

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           G+  N+SL+ L +  N +   G  A+ + +
Sbjct: 452 GIAVNESLKVLKMARNPMQSAGCYAICAAM 481



 Score = 45.4 bits (106), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E  +   +D+S  +   +G   +A+ + +N   + V+ + NG+   G KA    L+ N A
Sbjct: 371 ENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGNDGAKALGDALKVNSA 430

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI-AELLKN-NSILR 277
           L+ L+++ N I  EG   L   +  N  ++ L+++   ++  G  AI A +LKN NSI+ 
Sbjct: 431 LEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAGCYAICAAMLKNPNSIIT 490

Query: 278 VLELNNNMID 287
            ++ ++ +++
Sbjct: 491 SIDFSDILVN 500


>gi|356536033|ref|XP_003536545.1| PREDICTED: RAN GTPase-activating protein 2-like isoform 1 [Glycine
           max]
 gi|356536035|ref|XP_003536546.1| PREDICTED: RAN GTPase-activating protein 2-like isoform 2 [Glycine
           max]
          Length = 533

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I  E  + +C+++     ++ L   
Sbjct: 217 LNLSDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAARAVCELIPFTEKLKVLHFH 276

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  I   G  +L++AL   + ++ L L  N  
Sbjct: 277 NNMTGDEGALAIAEVVKRSPLLEDFRCSSTRIGAEGGVALSDALGSCAHLKKLDLRDNML 336

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  +L+K L  +  LRE++L   ++ D+G  A++  L      L VL++  N  +A 
Sbjct: 337 GVDGGVSLSKALSKHAELREVYLSYLNLEDDGAIAIVDALKESAPHLEVLEMSGNDSTAD 396

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  ++  + L  +NL  N++ DEGA+ I  A++ +  +  IDL  N I   GA  
Sbjct: 397 AAPAIAACLEAKQFLSKLNLSENELKDEGAKLITKAIEGHVQLKEIDLSTNQIRKDGAQQ 456

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A  +   +    L++  N I  +G   L ++ K
Sbjct: 457 LAVTVVQKADFKLLNINGNFISDEGIDELKDIFK 490



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 144/291 (49%), Gaps = 14/291 (4%)

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            LEG+  LR L+L  N++G++G+RA  + L S+K  L  L + N+ IS + A  V E I 
Sbjct: 208 ALEGS-VLRSLNLSDNALGEKGVRAFGALLKSQKC-LEELYLMNDGISKEAARAVCELIP 265

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             + L  ++ + N  GDEGA  IA+ +K++  +         I ++G  A++  L   + 
Sbjct: 266 FTEKLKVLHFHNNMTGDEGALAIAEVVKRSPLLEDFRCSSTRIGAEGGVALSDALGSCAH 325

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISI 503
           +  LDL  N +G DG  +LS+ L  H  +  + L +  +   GA  + D L+ +   + +
Sbjct: 326 LKKLDLRDNMLGVDGGVSLSKALSKHAELREVYLSYLNLEDDGAIAIVDALKESAPHLEV 385

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEA 561
           L++  N       S  +      + + + + +   +L  N L  +GAK + ++ +  +  
Sbjct: 386 LEMSGND------STADAAPAIAACLEAKQFLSKLNLSENELKDEGAKLITKAIE-GHVQ 438

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           L  IDL+ N+IR DGA  +A  +    D  +  LN+  NF++  G   L D
Sbjct: 439 LKEIDLSTNQIRKDGAQQLAVTVVQKADFKL--LNINGNFISDEGIDELKD 487



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 29/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  I A G  A    L S   LK L+L  N +G +G
Sbjct: 281 GDEGALAIAEVVKRSPLLEDFRCSSTRIGAEGGVALSDALGSCAHLKKLDLRDNMLGVDG 340

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L  +A +  + LS ++L D+GA AI + LK ++  L VLE++ N        +
Sbjct: 341 GVSLSKALSKHAELREVYLSYLNLEDDGAIAIVDALKESAPHLEVLEMSGNDSTADAAPA 400

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           +A  L     +  L+L+ N     GA  + K +EG+  L+E                   
Sbjct: 401 IAACLEAKQFLSKLNLSENELKDEGAKLITKAIEGHVQLKEIDLSTNQIRKDGAQQLAVT 460

Query: 335 ---------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
                    L+++GN I DEGI  L          L  LD
Sbjct: 461 VVQKADFKLLNINGNFISDEGIDELKDIFKKSPDMLGPLD 500


>gi|399497946|emb|CCG20301.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L+K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLSKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNVNLISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    LS+ L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLSKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  + ++N+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNV--NLISEEGVDELKE 489



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLSKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNVNLISEEGVDELKEIFKKSPEML 498



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 47/307 (15%)

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           S G +  R     L++ K +L  +D+     G N   A    ++        +L ++NL 
Sbjct: 163 SFGIDAARIAGPILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLS 222

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N +G++G       L+    +  + L  + I  + A+A++ ++     +  L    N  
Sbjct: 223 DNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMT 282

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           G +GA A++E++K    +   +    ++G+ G   + + L   + +  LDLR N    EV
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYL----QGAKCLAQSFK--------------- 556
                GL     A+   KH     + ++YL    +GA  +A + K               
Sbjct: 343 -----GL-VLSKALS--KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGND 394

Query: 557 -------------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
                           + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L 
Sbjct: 395 ITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNALR 452

Query: 604 KFGQSAL 610
           + G   L
Sbjct: 453 RAGARVL 459


>gi|281200632|gb|EFA74850.1| hypothetical protein PPL_11884 [Polysphondylium pallidum PN500]
          Length = 1264

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 15/283 (5%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            + T  ++GN    +G+  + + L  +  V+ L L    L   G K IA +L+ N  L+ L
Sbjct: 957  IDTWYIAGNNFDVDGITPIAEALEKDTKVKALWLKRNPLLTVGVKPIASMLEKNCYLQTL 1016

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLH 338
            +L N  I   G   L  +L +N+T+++L+++ N      A  + + LE G   L  L+L 
Sbjct: 1017 DLLNCGILDQGVEILFNSLRKNTTLKNLYIDTNGLTTASAGYICQLLESGENHLDSLYLS 1076

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM-- 396
             N +GDEG + +  GL   K +L  L +G+N I   GA H+ + I    SL+ +NL    
Sbjct: 1077 CNRMGDEGAKLISQGLLVDK-QLKRLGLGSNGIGPIGAKHLVDAILVHPSLVQLNLGFTR 1135

Query: 397  ---------NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
                     N +GD GA +IA  +K N  I +IDL  N I  +G   +   LK+N ++TS
Sbjct: 1136 ATFQLGAINNVLGDSGAAEIARLIKANTHIRSIDLTHNGISQQGIGMLKDSLKNNLILTS 1195

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
              LA N  G +   A  + + +    N L+ G  ++     + 
Sbjct: 1196 --LALNQFGMENNDAARQEINYALGRNRLQWGKAELNGENEDL 1236



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 23/296 (7%)

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVLE 280
            L+L    +G EG++ L   +  +  ++RL L +  + + G +AIA+ ++ N  S +    
Sbjct: 902  LDLCKQVVGPEGIRPLLGAMKKSTQIKRLLLGNNIVGNGGGEAIADYIRYNEDSKIDTWY 961

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +  N  D  G T +AEAL +++ +++L L  N    +G   +A  LE N  L+ L L   
Sbjct: 962  IAGNNFDVDGITPIAEALEKDTKVKALWLKRNPLLTVGVKPIASMLEKNCYLQTLDLLNC 1021

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM--ND 398
             I D+G+  L + L  +   L  L I  N ++   A ++ + +++ ++ L  +LY+  N 
Sbjct: 1022 GILDQGVEILFNSLR-KNTTLKNLYIDTNGLTTASAGYICQLLESGENHL-DSLYLSCNR 1079

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GDEGA+ I+  L  ++ +  + LG N I   GA  +   +  +  +  L+L +      
Sbjct: 1080 MGDEGAKLISQGLLVDKQLKRLGLGSNGIGPIGAKHLVDAILVHPSLVQLNLGF------ 1133

Query: 459  GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
              +A  ++    G IN +      +G SGA  +A +++ N  I  +DL  NG+  +
Sbjct: 1134 -TRATFQL----GAINNV------LGDSGAAEIARLIKANTHIRSIDLTHNGISQQ 1178



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 41/247 (16%)

Query: 405  EKIADALKQNR--TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            E IAD ++ N    I T  + GNN    G + IA  L+ ++ + +L L  NP+   G K 
Sbjct: 943  EAIADYIRYNEDSKIDTWYIAGNNFDVDGITPIAEALEKDTKVKALWLKRNPLLTVGVKP 1002

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR---------- 512
            ++ +L+ +  + TL L  C I   G E + + LR N T+  L +  NGL           
Sbjct: 1003 IASMLEKNCYLQTLDLLNCGILDQGVEILFNSLRKNTTLKNLYIDTNGLTTASAGYICQL 1062

Query: 513  --------DEVCSGCN-----GLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKV 557
                    D +   CN     G       +   K +    L  N +   GAK L  +  +
Sbjct: 1063 LESGENHLDSLYLSCNRMGDEGAKLISQGLLVDKQLKRLGLGSNGIGPIGAKHLVDAI-L 1121

Query: 558  VNEALTSIDLAF-----------NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            V+ +L  ++L F           N + D GA  IA+ +KAN    + S++L +N +++ G
Sbjct: 1122 VHPSLVQLNLGFTRATFQLGAINNVLGDSGAAEIARLIKAN--THIRSIDLTHNGISQQG 1179

Query: 607  QSALTDA 613
               L D+
Sbjct: 1180 IGMLKDS 1186



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)

Query: 176  DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-NIALKTLNLSGNPIGDEG 234
            D+G+  L  SL  N T + +    NG+T A       +L+S    L +L LS N +GDEG
Sbjct: 1025 DQGVEILFNSLRKNTTLKNLYIDTNGLTTASAGYICQLLESGENHLDSLYLSCNRMGDEG 1084

Query: 235  VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN-----------N 283
             K +   L+ +  ++RL L S  +   GAK + + +  +  L  L L            N
Sbjct: 1085 AKLISQGLLVDKQLKRLGLGSNGIGPIGAKHLVDAILVHPSLVQLNLGFTRATFQLGAIN 1144

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N++  SG   +A  +  N+ IRS+ L  N     G   L   L+ N  L  L L  N  G
Sbjct: 1145 NVLGDSGAAEIARLIKANTHIRSIDLTHNGISQQGIGMLKDSLKNNLILTSLAL--NQFG 1202

Query: 344  DE 345
             E
Sbjct: 1203 ME 1204



 Score = 43.1 bits (100), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 25/151 (16%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              S+ +S    GDEG   +++ L  ++  + +   +NGI   G K     +  + +L  L
Sbjct: 1070 LDSLYLSCNRMGDEGAKLISQGLLVDKQLKRLGLGSNGIGPIGAKHLVDAILVHPSLVQL 1129

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVD--LRDEGAKAIAELLKNNSILRVL 279
            NL                     G  R   QL +++  L D GA  IA L+K N+ +R +
Sbjct: 1130 NL---------------------GFTRATFQLGAINNVLGDSGAAEIARLIKANTHIRSI 1168

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
            +L +N I   G   L ++L  N  + SL LN
Sbjct: 1169 DLTHNGISQQGIGMLKDSLKNNLILTSLALN 1199


>gi|290974552|ref|XP_002670009.1| predicted protein [Naegleria gruberi]
 gi|284083563|gb|EFC37265.1| predicted protein [Naegleria gruberi]
          Length = 445

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 59/353 (16%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           L+  + +D+ G N  +EG  +++E     Q    ++   N I   G+K   G+ Q    L
Sbjct: 62  LKQLTQLDIDGNNIDEEGAKYISEM----QYLAILNMLGNNIGNEGVKYISGMKQ----L 113

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             LN+S N IG +GVK     +V+   +  L +    + DEGAK I E+       ++L+
Sbjct: 114 THLNVSENNIGLDGVKY----IVEMKQLTHLNIGQNSIGDEGAKLIGEM------TQLLD 163

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L    I Y G +S  E +   S +  L  + N    +  +   K + G   L  L +H N
Sbjct: 164 L---CIFYCGISS--EGIKHISKLDKLT-DLNISSNMLYDDSTKYISGMNQLTYLRIHDN 217

Query: 341 SIGDEGIRAL-----MSGLSSRKG--------------KLAVLDIGNNSISAKGAFHVAE 381
           +IGDEG + L     ++G++  +               KL  +DI +N+I   G    A+
Sbjct: 218 NIGDEGAKFLGKMKQLTGINIWRNELTAEGVKFLTGLDKLTEIDISSNNIGDNG----AK 273

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           YI   K L  +++  N+IG+EGA+ I +     + +T + L  NNI  +GA  I+++ K 
Sbjct: 274 YISEMKQLTNLDVSDNNIGEEGAKYIGNM----KQLTILTLWKNNIRGEGAKYISKLEK- 328

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
              +T LD++ N I   GAK +SE+      +N L +    IG  GA+++ +M
Sbjct: 329 ---LTELDISENHIDEKGAKYISEM----SQLNALDISVNIIGNQGAKYIKEM 374



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 151/338 (44%), Gaps = 86/338 (25%)

Query: 327 EGNKSLRE------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           EG K + E      L++ GN+IG+EG++ + SG+     +L  L++  N+I   G     
Sbjct: 78  EGAKYISEMQYLAILNMLGNNIGNEGVKYI-SGMK----QLTHLNVSENNIGLDGV---- 128

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR--- 437
           +YI   K L  +N+  N IGDEGA+ I + + Q   +     G   I S+G   I++   
Sbjct: 129 KYIVEMKQLTHLNIGQNSIGDEGAKLIGE-MTQLLDLCIFYCG---ISSEGIKHISKLDK 184

Query: 438 ---------VLKDNSV--------ITSLDLAYNPIGADGAKALSEVLKFHG--------- 471
                    +L D+S         +T L +  N IG +GAK L ++ +  G         
Sbjct: 185 LTDLNISSNMLYDDSTKYISGMNQLTYLRIHDNNIGDEGAKFLGKMKQLTGINIWRNELT 244

Query: 472 -----------NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN 520
                       +  + +    IG +GA+++++M +  N    LD+  N + +E      
Sbjct: 245 AEGVKFLTGLDKLTEIDISSNNIGDNGAKYISEMKQLTN----LDVSDNNIGEE------ 294

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
           G  +    I ++K +   +L  N +  +GAK +++      E LT +D++ N I + GA 
Sbjct: 295 GAKY----IGNMKQLTILTLWKNNIRGEGAKYISKL-----EKLTELDISENHIDEKGAK 345

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            I++  + N      +L+++ N +   G   + + K L
Sbjct: 346 YISEMSQLN------ALDISVNIIGNQGAKYIKEMKQL 377



 Score = 42.4 bits (98), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 53/233 (22%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +   + + +   N GDEG    A+ LG  +    ++   N +TA G+K   G+ +    L
Sbjct: 206 MNQLTYLRIHDNNIGDEG----AKFLGKMKQLTGINIWRNELTAEGVKFLTGLDK----L 257

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             +++S N IGD G K + ++      +  L +S  ++ +EGAK I  + +    L +L 
Sbjct: 258 TEIDISSNNIGDNGAKYISEM----KQLTNLDVSDNNIGEEGAKYIGNMKQ----LTILT 309

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I   G                                AK +   + L EL +  N
Sbjct: 310 LWKNNIRGEG--------------------------------AKYISKLEKLTELDISEN 337

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            I ++G + +     S   +L  LDI  N I  +GA ++ E  +    L+W N
Sbjct: 338 HIDEKGAKYI-----SEMSQLNALDISVNIIGNQGAKYIKEMKQLTDLLIWDN 385


>gi|403288047|ref|XP_003935228.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Saimiri boliviensis boliviensis]
          Length = 953

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 108/197 (54%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   K  L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKS-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN +S+  + ++ N +GDEGA+  A+AL+ + ++T + L  N I ++G  ++AR
Sbjct: 803 CLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I+ + L  N ++ E
Sbjct: 923 NTGITEICLNGNLIKPE 939



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 1/215 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K ++E L    I+  L L NN I   G   + + L E  ++  L L 
Sbjct: 733 IRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLG 792

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   LA  ++ ++S+ ++ + GN +GDEG +A    L +    L +L + +N 
Sbjct: 793 KNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPS-LTILSLASNG 851

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS +G   +A  ++   SL  + L  N++ DE AE +A+ LK N+T+  + L  N I +K
Sbjct: 852 ISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAK 911

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           G + +A  L++N+ IT + L  N I  + AK   +
Sbjct: 912 GTAQLADALQNNTGITEICLNGNLIKPEEAKVYED 946



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 33/237 (13%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA  I   L + +++T 
Sbjct: 729 RLTVIRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTH 788

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E L+ H ++  L L 
Sbjct: 789 LKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLA 848

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
              I   G + +A  L+ N ++ IL L  N L DEV                        
Sbjct: 849 SNGISTEGGKSLARALQQNTSLEILWLTQNELNDEV------------------------ 884

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                   A+ LA+  K VN+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 885 --------AESLAEMLK-VNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLN 932



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 5/215 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I   G   L+E L +   +  L L  N    +GA  + K 
Sbjct: 720 VQELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  KSL  L L  N I  EG + L   +   K   ++ D+G   N +  +GA   AE +
Sbjct: 780 LDECKSLTHLKLGKNKITSEGGKCLALAV---KNSRSISDVGMWGNQVGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N I  EG + +A AL+QN ++  + L  N ++ + A ++A +LK N 
Sbjct: 837 RNHPSLTILSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  L L  N I A G   L++ L+ +  I  + L
Sbjct: 897 TLKHLWLIQNQITAKGTAQLADALQNNTGITEICL 931



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VQELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L    +L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKSLTHLKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L +L L +N I   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTILSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 95/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   ++   +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 36/235 (15%)

Query: 380 AEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            + ++ C S L  I L +N I D G + +++ L + + +T + L  N I   GA  I ++
Sbjct: 720 VQELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKI 779

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L +   +T L L  N I ++G K L+  +K   +I+ + +   Q+G  GA+  A+ LR +
Sbjct: 780 LDECKSLTHLKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            +++IL L +NG+  E                                G K LA++ +  
Sbjct: 840 PSLTILSLASNGISTE--------------------------------GGKSLARALQQ- 866

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N +L  + L  NE+ D+ A ++A+ LK N+   +  L L  N +T  G + L DA
Sbjct: 867 NTSLEILWLTQNELNDEVAESLAEMLKVNQ--TLKHLWLIQNQITAKGTAQLADA 919



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  R+ S V M G   GDEG    AE+L  + +   +S A+NGI+ 
Sbjct: 795 KITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLASNGIST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELNDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934


>gi|189163508|ref|NP_001032872.2| uncharacterized protein C14orf166B homolog [Rattus norvegicus]
 gi|158706430|sp|A0JPI9.1|CN16B_RAT RecName: Full=Uncharacterized protein C14orf166B homolog
 gi|117558794|gb|AAI27445.1| LOC314328 protein [Rattus norvegicus]
          Length = 479

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G+K +   LV N  V +L+L    +++EG  ++ E+L  N  L
Sbjct: 89  NMEESCMNLNHHGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYL 148

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N +   G   +++ L EN S++  L L+GN      A  L + L  N  +R L
Sbjct: 149 QELNVSDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSL 208

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N   D     L   L+   G L  L++  N  + +GA  +   ++   +L  +++ 
Sbjct: 209 NLSHNEFSDTAGEYLGQMLALNVG-LQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVS 267

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G++GA  + D LK N  +  +D+  N I ++GAS I++ L++N  +  L L  NP+
Sbjct: 268 MNGFGNDGALALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPV 327

Query: 456 GADGAKAL 463
             +GA +L
Sbjct: 328 SLEGAYSL 335



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 137/264 (51%), Gaps = 2/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G+  +A +L  N T  ++    N I   GI +   +L  N  L+ LN
Sbjct: 93  SCMNLNHHGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELN 152

Query: 225 LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D L + N+ + +L+LS    ++E A  + + L +N  +R L L++
Sbjct: 153 VSDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSH 212

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N    +    L + L  N  ++SL+L+ N+    GA AL  GL  N +L++L +  N  G
Sbjct: 213 NEFSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFG 272

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           ++G  AL   L      L  +D+  N I+ +GA  +++ ++N + L  + L++N +  EG
Sbjct: 273 NDGALALGDTLKLNSC-LVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEG 331

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  +  A+K+N      DL  +N+
Sbjct: 332 AYSLILAIKRNPKSRMEDLDISNV 355



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 4/283 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+   GIKA    L SN  +  L L  N I +EG+  L ++L +N  ++ L +S  +L 
Sbjct: 100 HGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLG 159

Query: 260 DEGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            EGA+ I++ L+ NNS L  L+L+ N         L +AL  N  IRSL+L+ N      
Sbjct: 160 LEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDTA 219

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              L + L  N  L+ L+L  N     G  AL +GL +    L  LD+  N     GA  
Sbjct: 220 GEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNV-TLKKLDVSMNGFGNDGALA 278

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           + + +K    L+++++  N I +EGA +I+  L+ N  +  + L  N +  +GA ++   
Sbjct: 279 LGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGAYSLILA 338

Query: 439 LKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +K N  S +  LD++   +     K L  V   H  ++ +  G
Sbjct: 339 IKRNPKSRMEDLDISNVLVSEQFVKVLDGVCAIHPQLDVVYKG 381



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 148/320 (46%), Gaps = 41/320 (12%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G +G  A+A  L  N ++ +L L  NSI +EGI +LM  L      L  L++
Sbjct: 95  MNLNHHGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENY-YLQELNV 153

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N++  +GA  ++++++   S LW + L  N   +E A  +  AL  N  I +++L  N
Sbjct: 154 SDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHN 213

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                    + ++L  N  + SL+L++N     GA AL   L+ +  +  L +     G 
Sbjct: 214 EFSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGN 273

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            GA  + D L+ N+ +  +D+  NG+ +E                               
Sbjct: 274 DGALALGDTLKLNSCLVYVDVSRNGITNE------------------------------- 302

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANN 600
            GA  +++  +  NE L  + L  N +  +GA+++  A+K N     ED+ ++++ ++  
Sbjct: 303 -GASRISKGLE-NNECLQVLKLFLNPVSLEGAYSLILAIKRNPKSRMEDLDISNVLVSEQ 360

Query: 601 FLTKF-GQSALTDAKDLVYE 619
           F+    G  A+    D+VY+
Sbjct: 361 FVKVLDGVCAIHPQLDVVYK 380



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 106 GIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLGLEGARI 165

Query: 322 LAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  L E N SL +L L GN   +E    L   LSS   ++  L++ +N  S     ++ 
Sbjct: 166 ISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNY-RIRSLNLSHNEFSDTAGEYLG 224

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  +NL  N     GA  + + L+ N T+  +D+  N   + GA A+   LK
Sbjct: 225 QMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGALALGDTLK 284

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  +D++ N I  +GA  +S+ L+ +  +  LKL    +   GA
Sbjct: 285 LNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGA 332



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 108/231 (46%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + LN++ +   G  ++A  L+ N+T+  L L  N     G  +L + L  N  L+EL++ 
Sbjct: 95  MNLNHHGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVS 154

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N++G EG R +   L      L  L +  N    + A  + + + +   +  +NL  N+
Sbjct: 155 DNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHNE 214

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             D   E +   L  N  + +++L  N+ + +GA A+   L+ N  +  LD++ N  G D
Sbjct: 215 FSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGND 274

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           GA AL + LK +  +  + +    I   GA  ++  L  N  + +L L  N
Sbjct: 275 GALALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLN 325



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 29/207 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +SG  F +E    L ++L  N     ++ + N  +    +    +L  N+ L++LNLS N
Sbjct: 182 LSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDTAGEYLGQMLALNVGLQSLNLSWN 241

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
                G   LC+ L  N  +++L +S     ++GA A+ + LK NS L  ++++ N    
Sbjct: 242 HFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGALALGDTLKLNSCLVYVDVSRN---- 297

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G T+                        GA+ ++KGLE N+ L+ L L  N +  EG  
Sbjct: 298 -GITN-----------------------EGASRISKGLENNECLQVLKLFLNPVSLEGAY 333

Query: 349 ALMSGLS-SRKGKLAVLDIGNNSISAK 374
           +L+  +  + K ++  LDI N  +S +
Sbjct: 334 SLILAIKRNPKSRMEDLDISNVLVSEQ 360


>gi|432100119|gb|ELK29008.1| NACHT, LRR and PYD domains-containing protein 12 [Myotis davidii]
          Length = 999

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 140/302 (46%), Gaps = 4/302 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKN 272
           L SN  L  L L  N +G +GVK LC  L   N  ++ L+L    +     + +A  L  
Sbjct: 647 LSSNPNLIELALHHNALGSQGVKLLCQGLRHPNCKLQNLRLKRCRVPSAACQDLAAALAA 706

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           N  L  ++L++N +   G   L E L      ++ L L      A     +A  L  N+ 
Sbjct: 707 NKNLMRMDLSSNALGLPGVRLLCEGLRHPKCRLQMLQLRKCQLEAGAGQEVASVLSSNRH 766

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L EL L GN++ D G+R L  GL     +L +L +    ++A     +A  +   +SL+ 
Sbjct: 767 LVELDLTGNALEDTGLRRLCEGLRHPVCRLQILWLKICHLTAAACEDLASTLPVNQSLME 826

Query: 392 INLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           ++L +ND+GD G   + + L+  +  + T+ LG   + S     +A VL+ N  +  LDL
Sbjct: 827 LDLGLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLAAVLQSNRHLRELDL 886

Query: 451 AYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++N +G  G   L E L+     +  L L  C + A   E ++  L  N T++ L L  N
Sbjct: 887 SFNDLGDRGMWWLCEGLQHPTCRLQKLWLDSCGLTAKSCEDLSSTLGVNQTLTELYLTNN 946

Query: 510 GL 511
            L
Sbjct: 947 AL 948



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 3/258 (1%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           N  L  ++LS N +G  GV+ LC+ L      ++ LQL    L     + +A +L +N  
Sbjct: 707 NKNLMRMDLSSNALGLPGVRLLCEGLRHPKCRLQMLQLRKCQLEAGAGQEVASVLSSNRH 766

Query: 276 LRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L  L+L  N ++ +G   L E L      ++ L L   +  A     LA  L  N+SL E
Sbjct: 767 LVELDLTGNALEDTGLRRLCEGLRHPVCRLQILWLKICHLTAAACEDLASTLPVNQSLME 826

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N +GD G+  L  GL   + KL  L +G   +S+     +A  +++ + L  ++L
Sbjct: 827 LDLGLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLAAVLQSNRHLRELDL 886

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             ND+GD G   + + L+     +  + L    + +K    ++  L  N  +T L L  N
Sbjct: 887 SFNDLGDRGMWWLCEGLQHPTCRLQKLWLDSCGLTAKSCEDLSSTLGVNQTLTELYLTNN 946

Query: 454 PIGADGAKALSEVLKFHG 471
            +G  G + L + L+  G
Sbjct: 947 ALGNTGVRRLCKRLRHPG 964



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 16/274 (5%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           ++ LA  L  N +L EL LH N++G +G++ L  GL     KL  L +    + +     
Sbjct: 640 SDQLATALSSNPNLIELALHHNALGSQGVKLLCQGLRHPNCKLQNLRLKRCRVPSAACQD 699

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   K+L+ ++L  N +G  G   + + L+  +  +  + L    + +     +A 
Sbjct: 700 LAAALAANKNLMRMDLSSNALGLPGVRLLCEGLRHPKCRLQMLQLRKCQLEAGAGQEVAS 759

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADM 494
           VL  N  +  LDL  N +   G + L E L+    +  L++ W   C + A+  E +A  
Sbjct: 760 VLSSNRHLVELDLTGNALEDTGLRRLCEGLRH--PVCRLQILWLKICHLTAAACEDLAST 817

Query: 495 LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--L 551
           L  N ++  LDL  N L D  V   C GL      + +L+      L I  L  A C  L
Sbjct: 818 LPVNQSLMELDLGLNDLGDPGVLLLCEGLRHPQCKLQTLR------LGICRLSSAACEGL 871

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           A   +  N  L  +DL+FN++ D G + + + L+
Sbjct: 872 AAVLQ-SNRHLRELDLSFNDLGDRGMWWLCEGLQ 904



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 5/207 (2%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
           R    +D++G    D GL  L E L +     ++ +     +TAA  +     L  N +L
Sbjct: 765 RHLVELDLTGNALEDTGLRRLCEGLRHPVCRLQILWLKICHLTAAACEDLASTLPVNQSL 824

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+L  N +GD GV  LC+ L      ++ L+L    L     + +A +L++N  LR L
Sbjct: 825 MELDLGLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLAAVLQSNRHLREL 884

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIR--SLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +L+ N +   G   L E L ++ T R   L L+     A     L+  L  N++L EL+L
Sbjct: 885 DLSFNDLGDRGMWWLCEGL-QHPTCRLQKLWLDSCGLTAKSCEDLSSTLGVNQTLTELYL 943

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVL 364
             N++G+ G+R L   L     KL VL
Sbjct: 944 TNNALGNTGVRRLCKRLRHPGCKLRVL 970


>gi|301767766|ref|XP_002919315.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
           domain-containing protein 1-like [Ailuropoda
           melanoleuca]
          Length = 962

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 753 GVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKG-LTHLKLGENKITSEGGK 811

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  I ++ N IGDEGA   A+AL+ + ++T + L  N I ++G  ++A+
Sbjct: 812 CLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQ 871

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 872 ALQHNTTLRIFWLTKNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQS 931

Query: 498 NNTISILDLRANGLRDE 514
           N  I  + L  N ++ E
Sbjct: 932 NTGIMEICLNGNLIKPE 948



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 1/177 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  L  L + NN I+  GA ++A  +  CK L  + L
Sbjct: 742 IRLSVNQITDSGVKVLYEELTKYK-ILTFLGLYNNQITDVGARYIARILDECKGLTHLKL 800

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +++I  I + GN I  +GA+A A  L+++  +T+L LA+N 
Sbjct: 801 GENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNG 860

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           I  +G K+L++ L+ +  +    L   ++    AE +A+ML+ N T+  L L  N +
Sbjct: 861 ISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLKVNQTLKHLWLIQNQI 917



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S     L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 728 GVRELQPCFSC----LTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAR 783

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G   +A  +K++  I  + +  N IG +GA A +E
Sbjct: 784 YIARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAE 843

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++  L L +  I   G + +A  L++N T+ I  L  N L DEV          
Sbjct: 844 ALRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEV---------- 893

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 894 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGIAQLADALQ 930

Query: 586 ANEDVAVTSLN 596
           +N  +    LN
Sbjct: 931 SNTGIMEICLN 941



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 108/247 (43%), Gaps = 29/247 (11%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L  + LS N I D GVK L                             E L    IL  
Sbjct: 738 CLTVIRLSVNQITDSGVKVL----------------------------YEELTKYKILTF 769

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L NN I   G   +A  L E   +  L L  N   + G   LA  ++ +KS+ E+ + 
Sbjct: 770 LGLYNNQITDVGARYIARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMW 829

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN IGDEG  A    L +    L  L +  N IS +G   +A+ +++  +L    L  N+
Sbjct: 830 GNRIGDEGATAFAEALRNHPS-LTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNE 888

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ I  + L  N I  +
Sbjct: 889 LNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTGIMEICLNGNLIKPE 948

Query: 459 GAKALSE 465
            AK   +
Sbjct: 949 EAKVFED 955



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 5/205 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I  SG   L E L +   +  L L  N    +GA  +A+ 
Sbjct: 729 VRELQPCFSCLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARI 788

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   + + K   ++ +IG   N I  +GA   AE +
Sbjct: 789 LDECKGLTHLKLGENKITSEGGKCLALAVKNSK---SIFEIGMWGNRIGDEGATAFAEAL 845

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N I  EG + +A AL+ N T+    L  N ++ + A ++A +LK N 
Sbjct: 846 RNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLKVNQ 905

Query: 444 VITSLDLAYNPIGADGAKALSEVLK 468
            +  L L  N I A G   L++ L+
Sbjct: 906 TLKHLWLIQNQITAKGIAQLADALQ 930



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 95/215 (44%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           + E        + + +S     D G+  L E L   +    +    N IT  G +    +
Sbjct: 729 VRELQPCFSCLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARI 788

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGA A AE L+N+
Sbjct: 789 LDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNH 848

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L  N I   G  SLA+AL  N+T+R   L  N      A +LA+ L+ N++L+
Sbjct: 849 PSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLKVNQTLK 908

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +GI  L   L S  G + +   GN
Sbjct: 909 HLWLIQNQITAKGIAQLADALQSNTGIMEICLNGN 943



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 85/170 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +    +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 779 DVGARYIARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGA 838

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
               + L ++  +  L L+   +  EG K++A+ L++N+ LR+  L  N ++     SLA
Sbjct: 839 TAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLA 898

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA  L+ N  + E+ L+GN I  E
Sbjct: 899 EMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTGIMEICLNGNLIKPE 948



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++   + M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 804 KITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGIST 863

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N  L+   L+ N                            +L DE A+
Sbjct: 864 EGGKSLAQALQHNTTLRIFWLTKN----------------------------ELNDEVAE 895

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 896 SLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTGIMEICLNGN 943



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 33/72 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++     DE    LAE L  NQT + +    N ITA GI      LQSN  +  + L+GN
Sbjct: 884 LTKNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTGIMEICLNGN 943

Query: 229 PIGDEGVKCLCD 240
            I  E  K   D
Sbjct: 944 LIKPEEAKVFED 955


>gi|380007855|gb|AFD29894.1| nucleotide-binding oligomerization domain 1 protein [Paralichthys
           olivaceus]
 gi|380007857|gb|AFD29895.1| nucleotide-binding oligomerization domain 1 protein [Paralichthys
           olivaceus]
          Length = 939

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 5/230 (2%)

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NNN+ DY G   L  +  + + +R   L  N         LA+ L  +K +  L L+ N 
Sbjct: 698 NNNISDY-GVKQLRPSFCKITVVR---LCVNQLSDSSIEVLAEELCKHKVVEVLGLYNNH 753

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D G + L++ +     KL V+ IG N I++ G  ++A  I+   S+  + ++ N IGD
Sbjct: 754 ITDVGAK-LVAQIIEECPKLRVVKIGKNKITSVGGRYLASAIQKSSSIFDVGMWGNSIGD 812

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGAE  A+AL+ +  +T + L  N I SKG   ++  LK+NS +    L  N +  D A 
Sbjct: 813 EGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEALKENSTLRIFWLVQNELTDDAAP 872

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             +E++K +  +  L L   Q    G + +A+ L +N+ +  + ++ N L
Sbjct: 873 HFAELVKVNTGLTHLWLINNQFSVHGIKHLAEALTHNSALKEICVKGNQL 922



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 24/267 (8%)

Query: 198 AANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEGVKCL----CDI 241
            A GITA+ IK            A + VLQ    L  +++  N I D GVK L    C I
Sbjct: 657 TAKGITASLIKLGYCNIYSGDCAALNFVLQHRQRLLGVDMDNNNISDYGVKQLRPSFCKI 716

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            V    V +L  SS+++       +AE L  + ++ VL L NN I   G   +A+ + E 
Sbjct: 717 TVVRLCVNQLSDSSIEV-------LAEELCKHKVVEVLGLYNNHITDVGAKLVAQIIEEC 769

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +R + +  N   ++G   LA  ++ + S+ ++ + GNSIGDEG  A    L +   KL
Sbjct: 770 PKLRVVKIGKNKITSVGGRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHP-KL 828

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +  N I++KG   ++E +K   +L    L  N++ D+ A   A+ +K N  +T + 
Sbjct: 829 TNLSLSANGITSKGGKLLSEALKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLTHLW 888

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSL 448
           L  N     G   +A  L  NS +  +
Sbjct: 889 LINNQFSVHGIKHLAEALTHNSALKEI 915



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 4/242 (1%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L + Q    V    N I+  G+K       S   +  + L  N + D  ++ L + L  +
Sbjct: 685 LQHRQRLLGVDMDNNNISDYGVKQLRP---SFCKITVVRLCVNQLSDSSIEVLAEELCKH 741

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             VE L L +  + D GAK +A++++    LRV+++  N I   G   LA A+ ++S+I 
Sbjct: 742 KVVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKITSVGGRYLASAIQKSSSIF 801

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            + + GN  G  GA A A+ L  +  L  L L  N I  +G + L   L      L +  
Sbjct: 802 DVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEAL-KENSTLRIFW 860

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N ++   A H AE +K    L  + L  N     G + +A+AL  N  +  I + GN
Sbjct: 861 LVQNELTDDAAPHFAELVKVNTGLTHLWLINNQFSVHGIKHLAEALTHNSALKEICVKGN 920

Query: 426 NI 427
            +
Sbjct: 921 QL 922



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 3/206 (1%)

Query: 150 SKQTLNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           S  ++   A+EL     V++ G    +  D G   +A+ +        V    N IT+ G
Sbjct: 727 SDSSIEVLAEELCKHKVVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKITSVG 786

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +     +Q + ++  + + GN IGDEG +   + L ++  +  L LS+  +  +G K +
Sbjct: 787 GRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLL 846

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           +E LK NS LR+  L  N +        AE +  N+ +  L L  N     G   LA+ L
Sbjct: 847 SEALKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLTHLWLINNQFSVHGIKHLAEAL 906

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMS 352
             N +L+E+ + GN + +E  +  M+
Sbjct: 907 THNSALKEICVKGNQLSEEEEKEFMA 932



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 4/202 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            K+LR      + V +      D  +  LAE L  ++  E +    N IT  G K    +
Sbjct: 706 VKQLRPSFCKITVVRLCVNQLSDSSIEVLAEELCKHKVVEVLGLYNNHITDVGAKLVAQI 765

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++    L+ + +  N I   G + L   +  ++ +  + +    + DEGA+A AE L+N+
Sbjct: 766 IEECPKLRVVKIGKNKITSVGGRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNH 825

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L+ N I   G   L+EAL ENST+R   L  N      A   A+ ++ N  L 
Sbjct: 826 PKLTNLSLSANGITSKGGKLLSEALKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLT 885

Query: 334 ELHLHGNSIGDEGIRALMSGLS 355
            L L  N     GI+ L   L+
Sbjct: 886 HLWLINNQFSVHGIKHLAEALT 907



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 40/272 (14%)

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
             + +L  +D+ NN+IS  G   +      CK +  + L +N + D   E +A+ L +++
Sbjct: 686 QHRQRLLGVDMDNNNISDYGVKQLRPSF--CK-ITVVRLCVNQLSDSSIEVLAEELCKHK 742

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
            +  + L  N+I   GA  +A+++++   +  + +  N I + G + L+  ++   +I  
Sbjct: 743 VVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKITSVGGRYLASAIQKSSSIFD 802

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHM 535
           + +    IG  GAE  A+ LR +  ++ L L ANG+                        
Sbjct: 803 VGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITS---------------------- 840

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
                     +G K L+++ K  N  L    L  NE+ DD A   A+ +K N    +T L
Sbjct: 841 ----------KGGKLLSEALKE-NSTLRIFWLVQNELTDDAAPHFAELVKVN--TGLTHL 887

Query: 596 NLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
            L NN  +  G   L +A  L +  + KE+ +
Sbjct: 888 WLINNQFSVHGIKHLAEA--LTHNSALKEICV 917


>gi|407853630|gb|EKG06530.1| hypothetical protein TCSYLVIO_002358 [Trypanosoma cruzi]
          Length = 449

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 157/302 (51%), Gaps = 4/302 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   D+  EG  A+A ++  ++ 
Sbjct: 60  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNDIGKEGCDALANVVNISTK 118

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 119 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSL 178

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A+ +K  K L  + L 
Sbjct: 179 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGIALIADAVKGNKCLKDLTLG 238

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +AD L++N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 239 NNNATDAAAEALADMLRENSTLETLDLRSNTLTATGVRILARDGLANNIFLVSLSLSANP 298

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 299 IGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 358

Query: 513 DE 514
           +E
Sbjct: 359 NE 360



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 168/349 (48%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 67  VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNDIGKEGCDALANVVNISTKLQLLDIR 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N  L+ L+L+ N I
Sbjct: 126 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSLDLSLNEI 185

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GNK L++L L GN+   +
Sbjct: 186 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGIALIADAVKGNKCLKDLTL-GNNNATD 244

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 245 AAAEALADMLRENSTLETLDLRSNTLTATGVRILARDGLANNIFLVSLSLSANPIGSVGA 304

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +T +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 305 DEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 364

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS+ +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 365 LSKSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNNI 413



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 11/168 (6%)

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           +DL  N +G +  + ++ +L+    +  + L +  IG  G + +A+++  +  + +LD+R
Sbjct: 67  VDLIDNQLGPEQTQKIASMLE-SSTVRDVLLRYNDIGKEGCDALANVVNISTKLQLLDIR 125

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSI 565
            NGL     + C  +     +I     +    L  N +  +GA  L ++ +  N  L S+
Sbjct: 126 GNGL----TAAC--VRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEK-NVYLKSL 178

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           DL+ NEI   GA +IA  L A     + +L L  N L   G + + DA
Sbjct: 179 DLSLNEIGPSGAESIAHLL-ALPASPLKTLQLYGNHLGVAGIALIADA 225


>gi|397496667|ref|XP_003819153.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Pan
           paniscus]
          Length = 1093

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 18/328 (5%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEVCSGCNGLSF----FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            LDL +N L+D      NG+      F     +L+ +     C+  L  A CL  +  ++
Sbjct: 904 HLDLGSNWLQD------NGVKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVIL 954

Query: 559 NEA-LTSIDLAFNEIRDDGAFAIAQALK 585
           N   L S+DL  N+++DDG   +  AL+
Sbjct: 955 NNPNLRSLDLGNNDLQDDGVKILCDALR 982



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 6/311 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALVCNKR 1015

Query: 501  ISILDLRANGL 511
            +  ++L  N L
Sbjct: 1016 LIKMNLTQNTL 1026



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 60/258 (23%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L + +   E +S  + G+T AG +     L SN  L  L L
Sbjct: 791  LNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCL 850

Query: 226  SGNPIGDEGVKCLCDI-----------------------------LVDNAGVERLQLSSV 256
            + N +GD GVK + D                              L+ N  +  L L S 
Sbjct: 851  ADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSN 910

Query: 257  DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--- 312
             L+D G K + ++ ++ S  L+ LEL   ++  +    LA  +L N  +RSL L  N   
Sbjct: 911  WLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQ 970

Query: 313  ------------------------YGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                                    Y G  +L    L+  L  NK L +++L  N++G EG
Sbjct: 971  DDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALVCNKRLIKMNLTQNTLGYEG 1030

Query: 347  IRALMSGLSSRKGKLAVL 364
            I  L   L S K KL VL
Sbjct: 1031 IVKLYKVLKSPKCKLQVL 1048


>gi|402867129|ref|XP_003897720.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Papio
           anubis]
          Length = 501

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSH 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSHNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALHANR 474



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+ +N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSHNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 445

Query: 499 NTISILDLRANGLRDE 514
            T+   DLR + +  E
Sbjct: 446 KTLLEFDLRLSDVAQE 461



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSHNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|307691260|ref|NP_001182696.1| uncharacterized protein LOC627607 [Mus musculus]
          Length = 487

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 30/275 (10%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V+   +G+   G KA    L SN  +  L L  N I +EG+  L ++L +N  ++ L +S
Sbjct: 95  VNLNHHGLGPMGTKAIAITLVSNTTVLKLELGDNCIQEEGIMSLMEMLHENYYLQELNVS 154

Query: 255 SVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
             +L  EGA+ I+  L+ NNS L  L+L+ N         L +AL  N  IRSL+L+ N 
Sbjct: 155 DNNLGLEGARIISNFLQENNSSLWKLKLSGNSFKEECAALLCQALSSNYRIRSLNLSHNE 214

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              +G   L + L  N  L+ L+L  N     G  AL +GL S    L  LD+       
Sbjct: 215 FSDIGGEHLGQMLALNVGLQSLNLSWNHFNIRGAVALCNGLRSNV-TLKKLDVS------ 267

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
                                 MN  G+EGA  + DAL+ N  +  +D+  N I ++GAS
Sbjct: 268 ----------------------MNGFGNEGALALGDALRLNSCLVYVDVSRNGITNEGAS 305

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            I++ L++N  +  L L  NP+  +GA +L   +K
Sbjct: 306 KISKGLENNECLQVLKLFLNPLSLEGAYSLIMAIK 340



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 136/264 (51%), Gaps = 2/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N T  ++    N I   GI +   +L  N  L+ LN
Sbjct: 93  SCVNLNHHGLGPMGTKAIAITLVSNTTVLKLELGDNCIQEEGIMSLMEMLHENYYLQELN 152

Query: 225 LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + + L + N+ + +L+LS    ++E A  + + L +N  +R L L++
Sbjct: 153 VSDNNLGLEGARIISNFLQENNSSLWKLKLSGNSFKEECAALLCQALSSNYRIRSLNLSH 212

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  ++SL+L+ N+    GA AL  GL  N +L++L +  N  G
Sbjct: 213 NEFSDIGGEHLGQMLALNVGLQSLNLSWNHFNIRGAVALCNGLRSNVTLKKLDVSMNGFG 272

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  +D+  N I+ +GA  +++ ++N + L  + L++N +  EG
Sbjct: 273 NEGALALGDALRLNSC-LVYVDVSRNGITNEGASKISKGLENNECLQVLKLFLNPLSLEG 331

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  +  A+K+N      D+  +N+
Sbjct: 332 AYSLIMAIKRNPKSRMEDIDISNV 355



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 106 GTKAIAITLVSNTTVLKLELGDNCIQEEGIMSLMEMLHENYYLQELNVSDNNLGLEGARI 165

Query: 322 LAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  L E N SL +L L GNS  +E    L   LSS   ++  L++ +N  S  G  H+ 
Sbjct: 166 ISNFLQENNSSLWKLKLSGNSFKEECAALLCQALSSNY-RIRSLNLSHNEFSDIGGEHLG 224

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  +NL  N     GA  + + L+ N T+  +D+  N   ++GA A+   L+
Sbjct: 225 QMLALNVGLQSLNLSWNHFNIRGAVALCNGLRSNVTLKKLDVSMNGFGNEGALALGDALR 284

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  +D++ N I  +GA  +S+ L+ +  +  LKL    +   GA
Sbjct: 285 LNSCLVYVDVSRNGITNEGASKISKGLENNECLQVLKLFLNPLSLEGA 332



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 41/332 (12%)

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A   + N     ++LN +  G +G  A+A  L  N ++ +L L  N I +EGI +LM  L
Sbjct: 83  ASYFIRNMEESCVNLNHHGLGPMGTKAIAITLVSNTTVLKLELGDNCIQEEGIMSLMEML 142

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQ 413
                 L  L++ +N++  +GA  ++ +++   S LW + L  N   +E A  +  AL  
Sbjct: 143 HENY-YLQELNVSDNNLGLEGARIISNFLQENNSSLWKLKLSGNSFKEECAALLCQALSS 201

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N  I +++L  N     G   + ++L  N  + SL+L++N     GA AL   L+ +  +
Sbjct: 202 NYRIRSLNLSHNEFSDIGGEHLGQMLALNVGLQSLNLSWNHFNIRGAVALCNGLRSNVTL 261

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
             L +     G  GA  + D LR N+ +  +D+  NG+ +E                   
Sbjct: 262 KKLDVSMNGFGNEGALALGDALRLNSCLVYVDVSRNGITNE------------------- 302

Query: 534 HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-----E 588
                        GA  +++  +  NE L  + L  N +  +GA+++  A+K N     E
Sbjct: 303 -------------GASKISKGLE-NNECLQVLKLFLNPLSLEGAYSLIMAIKRNPKSRME 348

Query: 589 DVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 619
           D+ ++++ ++  F+    G  A+    D+VY+
Sbjct: 349 DIDISNVLVSEQFVKVLDGVCAIHPQLDVVYK 380



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 111/231 (48%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           LN++ +   G  ++A  L+ N+T+  L L  N     G  +L + L  N  L+EL++  N
Sbjct: 97  LNHHGLGPMGTKAIAITLVSNTTVLKLELGDNCIQEEGIMSLMEMLHENYYLQELNVSDN 156

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           ++G EG R + + L      L  L +  NS   + A  + + + +   +  +NL  N+  
Sbjct: 157 NLGLEGARIISNFLQENNSSLWKLKLSGNSFKEECAALLCQALSSNYRIRSLNLSHNEFS 216

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D G E +   L  N  + +++L  N+ + +GA A+   L+ N  +  LD++ N  G +GA
Sbjct: 217 DIGGEHLGQMLALNVGLQSLNLSWNHFNIRGAVALCNGLRSNVTLKKLDVSMNGFGNEGA 276

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            AL + L+ +  +  + +    I   GA  ++  L  N  + +L L  N L
Sbjct: 277 LALGDALRLNSCLVYVDVSRNGITNEGASKISKGLENNECLQVLKLFLNPL 327



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 29/207 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +SG +F +E    L ++L  N     ++ + N  +  G +    +L  N+ L++LNLS N
Sbjct: 182 LSGNSFKEECAALLCQALSSNYRIRSLNLSHNEFSDIGGEHLGQMLALNVGLQSLNLSWN 241

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
                G   LC+ L  N  +++L +S     +EGA A+ + L+ NS L  ++++ N    
Sbjct: 242 HFNIRGAVALCNGLRSNVTLKKLDVSMNGFGNEGALALGDALRLNSCLVYVDVSRN---- 297

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G T+                        GA+ ++KGLE N+ L+ L L  N +  EG  
Sbjct: 298 -GITN-----------------------EGASKISKGLENNECLQVLKLFLNPLSLEGAY 333

Query: 349 ALMSGLS-SRKGKLAVLDIGNNSISAK 374
           +L+  +  + K ++  +DI N  +S +
Sbjct: 334 SLIMAIKRNPKSRMEDIDISNVLVSEQ 360


>gi|410982498|ref|XP_003997593.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Felis
            catus]
          Length = 1328

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 151/342 (44%), Gaps = 11/342 (3%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGV 248
            Q     S   N +  A  K     L +N  L+ L L  N +G  GV+ LC+ L   +  +
Sbjct: 952  QALPAPSPETNVLPDAYSKQLAAALSTNPHLRELLLDHNALGSRGVRLLCEGLRHPSCKL 1011

Query: 249  ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSL 307
            + L+L    +     + +A  L  N  LR ++L+ N +   G   L + L      ++++
Sbjct: 1012 QNLRLKRCCVAPSACRDLAAALMANQNLRRMDLSGNGLGLPGVKMLCQGLRHPRCRLQAI 1071

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
             L      A     +A  L  N+ L EL L GNS+ D G+R L  GL      L +L + 
Sbjct: 1072 QLRKCELEAGACQEIASVLSTNQHLVELDLAGNSLEDLGLRLLCQGLRHPVCGLRILWLK 1131

Query: 368  NNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGN 425
               ++A     +   +  NC SL  ++L +ND+GD G   + + L+  +  + T+ LG  
Sbjct: 1132 ICDLTAAACEDLTSILSVNC-SLRELDLSLNDLGDPGVLLLCEGLRHPQCRLQTLRLGIC 1190

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQ 482
             + S     +  VL+ N  +  LDL++N +G  G   L E L  H      KL W   C 
Sbjct: 1191 RLGSAACEGLGAVLQVNPHLRELDLSFNDLGDRGMWPLCEGLG-HPTCRLQKL-WLDSCG 1248

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLS 523
            + A   E +A  L  + T++ L L  N L D  V   C GLS
Sbjct: 1249 LTAKACEHLASALGVSQTLTELYLTNNALGDTGVRLLCKGLS 1290



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 145/331 (43%), Gaps = 9/331 (2%)

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGA 316
            L D  +K +A  L  N  LR L L++N +   G   L E L   S  +++L L       
Sbjct: 964  LPDAYSKQLAAALSTNPHLRELLLDHNALGSRGVRLLCEGLRHPSCKLQNLRLKRCCVAP 1023

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                 LA  L  N++LR + L GN +G  G++ L  GL   + +L  + +    + A   
Sbjct: 1024 SACRDLAAALMANQNLRRMDLSGNGLGLPGVKMLCQGLRHPRCRLQAIQLRKCELEAGAC 1083

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
              +A  +   + L+ ++L  N + D G   +   L+     +  + L   ++ +     +
Sbjct: 1084 QEIASVLSTNQHLVELDLAGNSLEDLGLRLLCQGLRHPVCGLRILWLKICDLTAAACEDL 1143

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
              +L  N  +  LDL+ N +G  G   L E L+     + TL+LG C++G++  E +  +
Sbjct: 1144 TSILSVNCSLRELDLSLNDLGDPGVLLLCEGLRHPQCRLQTLRLGICRLGSAACEGLGAV 1203

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L+ N  +  LDL  N L D  +   C GL   H      K  L+   C    +  + LA 
Sbjct: 1204 LQVNPHLRELDLSFNDLGDRGMWPLCEGLG--HPTCRLQK--LWLDSCGLTAKACEHLAS 1259

Query: 554  SFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
            +   V++ LT + L  N + D G   + + L
Sbjct: 1260 ALG-VSQTLTELYLTNNALGDTGVRLLCKGL 1289



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 125/302 (41%), Gaps = 4/302 (1%)

Query: 174  FGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G+  L E L +     + +      +  +  +     L +N  L+ ++LSGN +G 
Sbjct: 992  LGSRGVRLLCEGLRHPSCKLQNLRLKRCCVAPSACRDLAAALMANQNLRRMDLSGNGLGL 1051

Query: 233  EGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             GVK LC  L      ++ +QL   +L     + IA +L  N  L  L+L  N ++  G 
Sbjct: 1052 PGVKMLCQGLRHPRCRLQAIQLRKCELEAGACQEIASVLSTNQHLVELDLAGNSLEDLGL 1111

Query: 292  TSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +R L L      A     L   L  N SLREL L  N +GD G+  L
Sbjct: 1112 RLLCQGLRHPVCGLRILWLKICDLTAAACEDLTSILSVNCSLRELDLSLNDLGDPGVLLL 1171

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GL   + +L  L +G   + +     +   ++    L  ++L  ND+GD G   + + 
Sbjct: 1172 CEGLRHPQCRLQTLRLGICRLGSAACEGLGAVLQVNPHLRELDLSFNDLGDRGMWPLCEG 1231

Query: 411  LKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L      +  + L    + +K    +A  L  +  +T L L  N +G  G + L + L  
Sbjct: 1232 LGHPTCRLQKLWLDSCGLTAKACEHLASALGVSQTLTELYLTNNALGDTGVRLLCKGLSH 1291

Query: 470  HG 471
             G
Sbjct: 1292 PG 1293



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 3/250 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+SG   G  G+  L + L + +   + +      + A   +    VL +N  L  L+L
Sbjct: 1042 MDLSGNGLGLPGVKMLCQGLRHPRCRLQAIQLRKCELEAGACQEIASVLSTNQHLVELDL 1101

Query: 226  SGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            +GN + D G++ LC  L     G+  L L   DL     + +  +L  N  LR L+L+ N
Sbjct: 1102 AGNSLEDLGLRLLCQGLRHPVCGLRILWLKICDLTAAACEDLTSILSVNCSLRELDLSLN 1161

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +   G   L E L      +++L L     G+     L   L+ N  LREL L  N +G
Sbjct: 1162 DLGDPGVLLLCEGLRHPQCRLQTLRLGICRLGSAACEGLGAVLQVNPHLRELDLSFNDLG 1221

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G+  L  GL     +L  L + +  ++AK   H+A  +   ++L  + L  N +GD G
Sbjct: 1222 DRGMWPLCEGLGHPTCRLQKLWLDSCGLTAKACEHLASALGVSQTLTELYLTNNALGDTG 1281

Query: 404  AEKIADALKQ 413
               +   L  
Sbjct: 1282 VRLLCKGLSH 1291



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 3/201 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D++G +  D GL  L + L +      + +     +TAA  +    +L  N +L+ L+L
Sbjct: 1099 LDLAGNSLEDLGLRLLCQGLRHPVCGLRILWLKICDLTAAACEDLTSILSVNCSLRELDL 1158

Query: 226  SGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N +GD GV  LC+ L      ++ L+L    L     + +  +L+ N  LR L+L+ N
Sbjct: 1159 SLNDLGDPGVLLLCEGLRHPQCRLQTLRLGICRLGSAACEGLGAVLQVNPHLRELDLSFN 1218

Query: 285  MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +   G   L E L   +  ++ L L+     A     LA  L  +++L EL+L  N++G
Sbjct: 1219 DLGDRGMWPLCEGLGHPTCRLQKLWLDSCGLTAKACEHLASALGVSQTLTELYLTNNALG 1278

Query: 344  DEGIRALMSGLSSRKGKLAVL 364
            D G+R L  GLS    KL VL
Sbjct: 1279 DTGVRLLCKGLSHPGCKLRVL 1299



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 101/276 (36%), Gaps = 71/276 (25%)

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +  LA  L  N  LREL L  N++G  G+R L  GL     KL  L +            
Sbjct: 969  SKQLAAALSTNPHLRELLLDHNALGSRGVRLLCEGLRHPSCKLQNLRL------------ 1016

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
                 K C            +       +A AL  N+ +  +DL GN +           
Sbjct: 1017 -----KRCC-----------VAPSACRDLAAALMANQNLRRMDLSGNGL----------- 1049

Query: 439  LKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRY 497
                             G  G K L + L+     +  ++L  C++ A   + +A +L  
Sbjct: 1050 -----------------GLPGVKMLCQGLRHPRCRLQAIQLRKCELEAGACQEIASVLST 1092

Query: 498  NNTISILDLRANGLRDE----VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL-A 552
            N  +  LDL  N L D     +C G          +  L+ +L+  +C   L  A C   
Sbjct: 1093 NQHLVELDLAGNSLEDLGLRLLCQG------LRHPVCGLR-ILWLKICD--LTAAACEDL 1143

Query: 553  QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 588
             S   VN +L  +DL+ N++ D G   + + L+  +
Sbjct: 1144 TSILSVNCSLRELDLSLNDLGDPGVLLLCEGLRHPQ 1179


>gi|201910|gb|AAA40406.1| Tcte-1 peptide [Mus musculus]
          Length = 506

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 2/219 (0%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 254 EWNLFLFTYRDCYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSH 313

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+++NL +N I
Sbjct: 314 NLIGDRGARAAAKLLS--HSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCI 371

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + IA AL+ N+ ++ + LGGN +    A+ ++++L  N+ + SL+L+ N IG DG
Sbjct: 372 EDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDG 431

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            K L E +  +  I    L    +       +  +L  N
Sbjct: 432 GKQLLEGISDNKTILEFDLRLSDVSQESEYLIGQVLHAN 470



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 269 AATIKACH-------TLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 321

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +   G  SLA AL  N+ +  L+L  N     G  A+A
Sbjct: 322 RAAAKLL-SHSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIA 380

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             LE NK L  LHL GN +  E    L+S + +    L  L++  N I   G   + E I
Sbjct: 381 HALETNKCLSVLHLGGNKLS-EPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGI 439

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K++L  +L ++D+  E    I   L  NR
Sbjct: 440 SDNKTILEFDLRLSDVSQESEYLIGQVLHANR 471



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    L  SL  +   EE+  + N I   G +A   +L S+  L+ LNL+ N +   G 
Sbjct: 290 DDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLL-SHSRLRVLNLANNQLQAPGA 348

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +AIA  L+ N  L VL L  N +     T L+
Sbjct: 349 QSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLS 408

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ SL+L+ N+ G  G   L +G+  NK++ E  L  + +  E
Sbjct: 409 QMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKTILEFDLRLSDVSQE 458



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 2/194 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA   A
Sbjct: 267 SLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPA-LEELDLSHNLIGDRGARAAA 325

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  +  ++L  N I  +G  AIA  L+
Sbjct: 326 KLLSHSR-LRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALE 384

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  ++ L L  N +    A  LS++L  +  + +L L    IG  G + + + +  N T
Sbjct: 385 TNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKT 444

Query: 501 ISILDLRANGLRDE 514
           I   DLR + +  E
Sbjct: 445 ILEFDLRLSDVSQE 458



 Score = 39.3 bits (90), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 43/98 (43%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DEG   +A +L  N+    +    N ++         +L  N  L +LNLS N IG +G 
Sbjct: 373 DEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGG 432

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           K L + + DN  +    L   D+  E    I ++L  N
Sbjct: 433 KQLLEGISDNKTILEFDLRLSDVSQESEYLIGQVLHAN 470


>gi|71418232|ref|XP_810784.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70875372|gb|EAN88933.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 449

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 157/302 (51%), Gaps = 4/302 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   D+  EG  A+A ++  ++ 
Sbjct: 60  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNDIGKEGCDALANVVNVSTK 118

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 119 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSL 178

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A+ +K  K L  + L 
Sbjct: 179 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGIALIADAVKGNKCLKDLTLG 238

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +AD L++N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 239 NNNATDAAAEALADMLRENSTLETLDLRSNTLTATGVRILARDGLANNIFLVSLSLSANP 298

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 299 IGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 358

Query: 513 DE 514
           +E
Sbjct: 359 NE 360



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 149/309 (48%), Gaps = 3/309 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG 
Sbjct: 100 DIGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGH 159

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGF 291
           EG   L   L  N  ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G 
Sbjct: 160 EGAALLFRALEKNVYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGI 219

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +A+A+  N  ++ L L  N      A ALA  L  N +L  L L  N++   G+R L 
Sbjct: 220 ALIADAVKGNKCLKDLTLGNNNATDAAAEALADMLRENSTLETLDLRSNTLTATGVRILA 279

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIAD 409
               +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA 
Sbjct: 280 RDGLANNIFLVSLSLSANPIGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIAS 339

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            +    T+  ++L GN + ++ A  ++R + ++  I+ +DL+ N IG  GA  L +  + 
Sbjct: 340 LIAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQL 399

Query: 470 HGNINTLKL 478
           +  I++L L
Sbjct: 400 NARISSLLL 408



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 167/349 (47%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 67  VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNDIGKEGCDALANVVNVSTKLQLLDIR 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N  L+ L+L+ N I
Sbjct: 126 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSLDLSLNEI 185

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GNK L++L L GN+   +
Sbjct: 186 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGIALIADAVKGNKCLKDLTL-GNNNATD 244

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 245 AAAEALADMLRENSTLETLDLRSNTLTATGVRILARDGLANNIFLVSLSLSANPIGSVGA 304

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +T +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 305 DEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 364

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS  +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 365 LSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNNI 413



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 14/199 (7%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSV---ITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I++    I  +    I R + D      +  +DL  N +G +  + ++ +L+    +  +
Sbjct: 36  IEMAWTRITPELCEGICRTIVDRDADVPVRVVDLIDNQLGPEQTQKIASMLE-SSTVRDV 94

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L +  IG  G + +A+++  +  + +LD+R NGL     + C  +     +I     + 
Sbjct: 95  LLRYNDIGKEGCDALANVVNVSTKLQLLDIRGNGL----TAAC--VRKLLKSISMSTALT 148

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
              L  N +  +GA  L ++ +  N  L S+DL+ NEI   GA +IA  L A     + +
Sbjct: 149 RLGLSANKIGHEGAALLFRALEK-NVYLKSLDLSLNEIGPSGAESIAHLL-ALPASPLKT 206

Query: 595 LNLANNFLTKFGQSALTDA 613
           L L  N L   G + + DA
Sbjct: 207 LQLYGNHLGVAGIALIADA 225


>gi|291239438|ref|XP_002739630.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1748

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 184/442 (41%), Gaps = 52/442 (11%)

Query: 171  GRNFGDEGLFFLAESLGYNQTAEEVSFAANG-ITAAGIKA-FDGVLQSNIALKTLNLSGN 228
            G  F    +  ++E L +N     +S   +     +GI + +   L+ N  L++LNLS  
Sbjct: 1306 GSKFSPTHMAVISEVLKHNTRLLSLSIGGHDYFCDSGIPSLYQNGLKFNSTLQSLNLSFC 1365

Query: 229  PIGDE--------------------GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
             +G++                    G   +  I+     + ++ +S   L  +GA+ +A 
Sbjct: 1366 NLGEDESSWMSVCGSSLEPMFYDFTGAAVIAHIIRHCFSLTQVNVSQCKLTPQGAQHLAN 1425

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             +K N  +  L+L+ N I   G   +   L  N+T+  L LN            +  L  
Sbjct: 1426 AMKQNQTVTSLDLSYNSIGEVGIAEVGNVLRINTTLNELQLNRIGFDEHSIMVFSDALGR 1485

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ LR+L+L    +    +   +      K  L +LD+  N+I+  G   + + +++   
Sbjct: 1486 NRGLRKLYLKECGVWGRALIVPLVNALCHKTDLELLDLSLNAIADDGIVILMDVLQHSNQ 1545

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            +  ++L +N I D   + +A  L     +  + L  N+I S+GA  IA +L   + +  L
Sbjct: 1546 MKHLDLSVNKISDISIQSLAQGLLAMPQLQALLLQLNDITSRGARVIASLLPRLTQLKRL 1605

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG  G   +++ LK H N+  + L    IG SGA+ +A++L  N TI+ L L  
Sbjct: 1606 DLEKNKIGDKGVTWVAKSLKNHPNLRVVNLCDNDIGNSGAKSMAEVLHINPTITHLKL-- 1663

Query: 509  NGLRDEVCSGCNGLSFF-HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
                   C      ++  +  ++++   L                      N  L  +D 
Sbjct: 1664 -------CGDVRQTNYIDNEGVWNISRAL--------------------ATNRTLLYLDF 1696

Query: 568  AFNEIRDDGAFAIAQALKANED 589
                I ++GA A+A AL+ N D
Sbjct: 1697 TRQHIGNEGAMALANALEGNPD 1718



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 49/386 (12%)

Query: 261  EGAKAIAELLKNNSI--LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG-NYGGAL 317
            E  +AI + ++ +SI  L V     +    +    ++E L  N+ + SL + G +Y    
Sbjct: 1282 ENLQAIVDSIRCSSIEHLYVFPCFGSKFSPTHMAVISEVLKHNTRLLSLSIGGHDYFCDS 1341

Query: 318  GANALAK-GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            G  +L + GL+ N +L+ L+L   ++G++   + MS   S    +             GA
Sbjct: 1342 GIPSLYQNGLKFNSTLQSLNLSFCNLGEDE-SSWMSVCGSSLEPMFY--------DFTGA 1392

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              +A  I++C SL  +N+    +  +GA+ +A+A+KQN+T+T++DL  N+I   G + + 
Sbjct: 1393 AVIAHIIRHCFSLTQVNVSQCKLTPQGAQHLANAMKQNQTVTSLDLSYNSIGEVGIAEVG 1452

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKAL--SEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
             VL+ N+ +  L L  N IG D    +  S+ L  +  +  L L  C  G  G   +  +
Sbjct: 1453 NVLRINTTLNELQL--NRIGFDEHSIMVFSDALGRNRGLRKLYLKEC--GVWGRALIVPL 1508

Query: 495  ---LRYNNTISILDLRANGLRDE-------VCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
               L +   + +LDL  N + D+       V    N +     ++  +  +   SL    
Sbjct: 1509 VNALCHKTDLELLDLSLNAIADDGIVILMDVLQHSNQMKHLDLSVNKISDISIQSLAQGL 1568

Query: 545  L-----------------QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            L                 +GA+ +A     + + L  +DL  N+I D G   +A++LK +
Sbjct: 1569 LAMPQLQALLLQLNDITSRGARVIASLLPRLTQ-LKRLDLEKNKIGDKGVTWVAKSLKNH 1627

Query: 588  EDVAVTSLNLANNFLTKFGQSALTDA 613
             ++ V  +NL +N +   G  ++ + 
Sbjct: 1628 PNLRV--VNLCDNDIGNSGAKSMAEV 1651



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 5/193 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+S     D+G+  L + L ++   + +  + N I+   I++    L +   L+ L L 
Sbjct: 1521 LDLSLNAIADDGIVILMDVLQHSNQMKHLDLSVNKISDISIQSLAQGLLAMPQLQALLLQ 1580

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N I   G + +  +L     ++RL L    + D+G   +A+ LKN+  LRV+ L +N I
Sbjct: 1581 LNDITSRGARVIASLLPRLTQLKRLDLEKNKIGDKGVTWVAKSLKNHPNLRVVNLCDNDI 1640

Query: 287  DYSGFTSLAEALLENSTIRSLHLNG-----NYGGALGANALAKGLEGNKSLRELHLHGNS 341
              SG  S+AE L  N TI  L L G     NY    G   +++ L  N++L  L      
Sbjct: 1641 GNSGAKSMAEVLHINPTITHLKLCGDVRQTNYIDNEGVWNISRALATNRTLLYLDFTRQH 1700

Query: 342  IGDEGIRALMSGL 354
            IG+EG  AL + L
Sbjct: 1701 IGNEGAMALANAL 1713


>gi|147882993|gb|ABQ51813.1| RAN GTPase-activating protein 2 [Nicotiana benthamiana]
          Length = 541

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L    + I  E  + + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G ++L EAL + S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGKCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L+K L  +++L E++L   ++ DEG  A+++ L      L VL++  N I+ +
Sbjct: 339 GPEAGLVLSKALSKHENLTEVYLSYLNLEDEGAIAIVNTLKDSAPSLGVLEMAGNDITEE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ D GA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQFLSKLSLGENELMDGGAIQIAKALRGHNHLKEVDMNTNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +AR +        L++  N I  +G   L ++ +
Sbjct: 459 LARTVLHKDEFKLLNVNGNFISEEGIDELKDIFE 492



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 145/294 (49%), Gaps = 14/294 (4%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L   N+ IS + A  V+E
Sbjct: 207 FSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELYFINDGISQEAARAVSE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G SA+   L  
Sbjct: 265 LVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGK 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
            S +  LDL  N  G +    LS+ L  H N+  + L +  +   GA  + + L+ +  +
Sbjct: 325 CSHLKKLDLRDNMFGPEAGLVLSKALSKHENLTEVYLSYLNLEDEGAIAIVNTLKDSAPS 384

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVV 558
           + +L++  N + +E            S I + + +   SL  N L   GA  +A++ +  
Sbjct: 385 LGVLEMAGNDITEEAAPA------IASCIAAKQFLSKLSLGENELMDGGAIQIAKALRGH 438

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           N  L  +D+  N +R  GA  +A+ +   ++  +  LN+  NF+++ G   L D
Sbjct: 439 NH-LKEVDMNTNALRRAGARVLARTVLHKDEFKL--LNVNGNFISEEGIDELKD 489



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 150/316 (47%), Gaps = 6/316 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G++  E+   ++ F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRVEAEALDVMSIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
            F  +GI+    +A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 YFINDGISQEAARAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG  A+ E L   S L+ L+L +NM        L++AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSALCEALGKCSHLKKLDLRDNMFGPEAGLVLSKALSKHENLTEVYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+   L+ +  SL  L + GN I +E   A+ S +++++  L+ L +G N +   
Sbjct: 368 DEGAIAIVNTLKDSAPSLGVLEMAGNDITEEAAPAIASCIAAKQF-LSKLSLGENELMDG 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L  +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALRGHNHLKEVDMNTNALRRAGARVLARTVLHKDEFKLLNVNGNFISEEGIDE 486

Query: 435 IARVL-KDNSVITSLD 449
           +  +  K   ++ SL+
Sbjct: 487 LKDIFEKSPELLASLE 502


>gi|403254159|ref|XP_003919845.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14
           [Saimiri boliviensis boliviensis]
          Length = 1093

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 156/324 (48%), Gaps = 10/324 (3%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +  +L  N  LR L+L+++ +D S      + L+         L   +  + G   ++  
Sbjct: 665 LCSVLHTNEHLRELDLSHSNLDKSAMNIFHQELMHPDCKLQKLLLKFFTFSDGCQDISTS 724

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  N++L+ L L G+ IGD G+++L   L     KL  L + + +++     +++  +  
Sbjct: 725 LIHNQNLKHLDLKGSDIGDNGVKSLCEALKHPDCKLQTLRLESCNLTVFCCLNISNALIR 784

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +SL+++NL  N++ D+G + + +AL+     +  + L    +   G   ++  L  N  
Sbjct: 785 SQSLIFLNLSTNNLLDDGVQLLCEALRHPECYLERLSLESCGLTEAGCEDLSLALISNKR 844

Query: 445 ITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           +T L LA N +G  G K +S+ L+     + +L L  C   +   E ++  L YN +++ 
Sbjct: 845 LTHLCLADNVLGDGGVKLISDALQHPQCTLQSLVLRRCHFTSLSTEHLSTSLLYNKSLTH 904

Query: 504 LDLRANGLRDEVCSGCNGLS-FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA- 561
           LDL +N L+D+   G   L   F     +L+ +     C+  L  A CL  +  ++N + 
Sbjct: 905 LDLGSNSLQDD---GAKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVILNNSN 958

Query: 562 LTSIDLAFNEIRDDGAFAIAQALK 585
           L S+DL  N ++DDG   +  AL+
Sbjct: 959 LRSLDLGNNNLQDDGVKILCDALR 982



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 159/363 (43%), Gaps = 14/363 (3%)

Query: 155  NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
            NE  +EL      D+S  N     +    + L +     +         + G +     L
Sbjct: 672  NEHLREL------DLSHSNLDKSAMNIFHQELMHPDCKLQKLLLKFFTFSDGCQDISTSL 725

Query: 215  QSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN 273
              N  LK L+L G+ IGD GVK LC+ L   +  ++ L+L S +L       I+  L  +
Sbjct: 726  IHNQNLKHLDLKGSDIGDNGVKSLCEALKHPDCKLQTLRLESCNLTVFCCLNISNALIRS 785

Query: 274  SILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
              L  L L+ NN++D  G   L EAL      +  L L        G   L+  L  NK 
Sbjct: 786  QSLIFLNLSTNNLLD-DGVQLLCEALRHPECYLERLSLESCGLTEAGCEDLSLALISNKR 844

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  N +GD G++ +   L   +  L  L +     ++    H++  +   KSL  
Sbjct: 845  LTHLCLADNVLGDGGVKLISDALQHPQCTLQSLVLRRCHFTSLSTEHLSTSLLYNKSLTH 904

Query: 392  INLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N + D+GA+ + D  +     +  ++L G  + +     +A V+ +NS + SLDL
Sbjct: 905  LDLGSNSLQDDGAKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNSNLRSLDL 964

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLG--WCQIGASGAEFVADMLRYNNTISILDLRA 508
              N +  DG K L + L+ H N N  +LG  +C + +   + ++  L  N  +  ++L  
Sbjct: 965  GNNNLQDDGVKILCDALR-HPNCNIQRLGLEYCGLTSLCCQDLSSALSINQRLIKMNLTQ 1023

Query: 509  NGL 511
            N L
Sbjct: 1024 NIL 1026



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 60/269 (22%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L + +   E +S  + G+T AG +     L SN  L  L L
Sbjct: 791  LNLSTNNLLDDGVQLLCEALRHPECYLERLSLESCGLTEAGCEDLSLALISNKRLTHLCL 850

Query: 226  SGNPIGDEGVKCLCDI-----------------------------LVDNAGVERLQLSSV 256
            + N +GD GVK + D                              L+ N  +  L L S 
Sbjct: 851  ADNVLGDGGVKLISDALQHPQCTLQSLVLRRCHFTSLSTEHLSTSLLYNKSLTHLDLGSN 910

Query: 257  DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--- 312
             L+D+GAK + ++ ++ S  L+ LEL   ++  +    LA  +L NS +RSL L  N   
Sbjct: 911  SLQDDGAKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNSNLRSLDLGNNNLQ 970

Query: 313  ------------------------YGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                                    Y G  +L    L+  L  N+ L +++L  N +G EG
Sbjct: 971  DDGVKILCDALRHPNCNIQRLGLEYCGLTSLCCQDLSSALSINQRLIKMNLTQNILGYEG 1030

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            I  L   L S +  L VL +   +   K 
Sbjct: 1031 IAKLCEVLKSPECNLQVLGLCKEAFDEKA 1059


>gi|189027074|ref|NP_001121103.1| NACHT, LRR and PYD domains-containing protein 5 [Macaca mulatta]
 gi|164709497|gb|ABY67443.1| NLR family pyrin domain-containing protein 5 [Macaca mulatta]
          Length = 1199

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 4/306 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R   S+++ G +  +E +    E+L + +   E +     G+T A       +L ++ +L
Sbjct: 836  RNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDRCGLTHACYLKISQILTTSPSL 895

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GV  L D L V    +++L L    +   G +++A  L +N  L  L
Sbjct: 896  KSLSLAGNEVTDQGVTPLSDALRVSQCALQKLTLEDCGIMATGCQSLASALVSNRSLTHL 955

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+NN +   G   L  ++ L + ++R L LN       G   LA  L GN  L  L L 
Sbjct: 956  CLSNNDLGNEGVNLLCRSMRLPHCSLRRLMLNRCNLHTAGCGFLALALMGNAWLTHLSLS 1015

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G++ L   +      L  L++    ++A     ++  I   + L  ++L  N 
Sbjct: 1016 VNPVEDNGMKLLCEVMREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNA 1075

Query: 399  IGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +GD G   + + LKQ +++ T + L    + S    A++  L  N  +TSL+L  N    
Sbjct: 1076 LGDGGVAALCEGLKQKKSVLTRLGLKACGLTSDCCEALSLALSCNRHLTSLNLVQNNFSP 1135

Query: 458  DGAKAL 463
            +G   L
Sbjct: 1136 EGMMKL 1141



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 160/361 (44%), Gaps = 13/361 (3%)

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGA 316
            L ++  +    +L  +  LR L+L ++++      +L   L   +  I++L    N   A
Sbjct: 764  LMEDQWEDFCSVLSTHPNLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLKFR-NAQIA 822

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             G   L + L  N++LR L+L G  + +E +R     L   K  L  L +    ++    
Sbjct: 823  SGLQHLWRTLIANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDRCGLTHACY 882

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
              +++ +    SL  ++L  N++ D+G   ++DAL+ ++  +  + L    I + G  ++
Sbjct: 883  LKISQILTTSPSLKSLSLAGNEVTDQGVTPLSDALRVSQCALQKLTLEDCGIMATGCQSL 942

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
            A  L  N  +T L L+ N +G +G   L   ++  H ++  L L  C +  +G  F+A  
Sbjct: 943  ASALVSNRSLTHLCLSNNDLGNEGVNLLCRSMRLPHCSLRRLMLNRCNLHTAGCGFLALA 1002

Query: 495  LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK-HMLFYSLCINYLQGAKCLAQ 553
            L  N  ++ L L  N + D      NG+      +     H+    L   +L  A C + 
Sbjct: 1003 LMGNAWLTHLSLSVNPVED------NGMKLLCEVMREPSCHLQDLELVKCHLTAACCESL 1056

Query: 554  SFKVV-NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            S  +  +  L S+DL  N + D G  A+ + LK  + V +T L L    LT     AL+ 
Sbjct: 1057 SCVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKKSV-LTRLGLKACGLTSDCCEALSL 1115

Query: 613  A 613
            A
Sbjct: 1116 A 1116



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 146/319 (45%), Gaps = 4/319 (1%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDL 258
            N   A+G++     L +N  L++LNL G  + +E V+  C+ L      +E L+L    L
Sbjct: 818  NAQIASGLQHLWRTLIANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDRCGL 877

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGAL 317
                   I+++L  +  L+ L L  N +   G T L++AL +    ++ L L      A 
Sbjct: 878  THACYLKISQILTTSPSLKSLSLAGNEVTDQGVTPLSDALRVSQCALQKLTLEDCGIMAT 937

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G  +LA  L  N+SL  L L  N +G+EG+  L   +      L  L +   ++   G  
Sbjct: 938  GCQSLASALVSNRSLTHLCLSNNDLGNEGVNLLCRSMRLPHCSLRRLMLNRCNLHTAGCG 997

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
             +A  +     L  ++L +N + D G + + + +++    +  ++L   ++ +    +++
Sbjct: 998  FLALALMGNAWLTHLSLSVNPVEDNGMKLLCEVMREPSCHLQDLELVKCHLTAACCESLS 1057

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT-LKLGWCQIGASGAEFVADML 495
             V+  +  + SLDL  N +G  G  AL E LK   ++ T L L  C + +   E ++  L
Sbjct: 1058 CVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKKSVLTRLGLKACGLTSDCCEALSLAL 1117

Query: 496  RYNNTISILDLRANGLRDE 514
              N  ++ L+L  N    E
Sbjct: 1118 SCNRHLTSLNLVQNNFSPE 1136


>gi|399497838|emb|CCG20247.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 134/274 (48%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EA    S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAHGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +    
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAH 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S         S I + + +   SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEASSA------IASCIAAKQLLAKLSLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E     S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEAHGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 124/298 (41%), Gaps = 29/298 (9%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  K L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQKLLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + +     + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEAHGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
           ++YL    +GA  +A + K    +L  +++A N+I  + + AIA  + A + +A  SL
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSL 418


>gi|149508354|ref|XP_001507977.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Ornithorhynchus anatinus]
          Length = 455

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 2/220 (0%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  +    SLA AL    T++ L L  +      A  L  GL  + +L+EL L  
Sbjct: 221 EWNLFLFTHRDCRSLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSH 280

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA+   L+    +L  L++ NN + A GA  +A  + +  +L  +NL +N I
Sbjct: 281 NLIGDRGARAVAKLLN--HSRLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRI 338

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N T+  + LG N +    A+ +++VL  N+ + S++L+ N IG DG
Sbjct: 339 EDEGGQALAHALQTNDTLVVLHLGSNELSEPTATLLSQVLSVNTTLASVNLSCNHIGPDG 398

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            K L E +  +  +    L   ++G      +   L+ N 
Sbjct: 399 GKQLLEGMADNRTVVEFDLRLAEVGQESEYLMGQALKANQ 438



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 113/213 (53%), Gaps = 2/213 (0%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T    ++  G L++   LK L L+ + + DE  + L   L+D+  ++ L LS   + D G
Sbjct: 228 THRDCRSLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRG 287

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A+A+A+LL N+S LR L L+NN +   G  +LA AL  N+T+ SL+L  N     G  AL
Sbjct: 288 ARAVAKLL-NHSRLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQAL 346

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A  L+ N +L  LHL  N +  E    L+S + S    LA +++  N I   G   + E 
Sbjct: 347 AHALQTNDTLVVLHLGSNELS-EPTATLLSQVLSVNTTLASVNLSCNHIGPDGGKQLLEG 405

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           + + ++++  +L + ++G E    +  ALK N+
Sbjct: 406 MADNRTVVEFDLRLAEVGQESEYLMGQALKANQ 438



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 2/187 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  L+  ++L+ L L  + + DE  R L+ GL      L  LD+ +N I  +GA  VA
Sbjct: 234 SLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPA-LQELDLSHNLIGDRGARAVA 292

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N T+T+++L  N I  +G  A+A  L+
Sbjct: 293 KLLNHSR-LRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALAHALQ 351

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +  L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 352 TNDTLVVLHLGSNELSEPTATLLSQVLSVNTTLASVNLSCNHIGPDGGKQLLEGMADNRT 411

Query: 501 ISILDLR 507
           +   DLR
Sbjct: 412 VVEFDLR 418



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 111/215 (51%), Gaps = 10/215 (4%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  +K C++L  + L  + + DE A  +   L  +  +  +DL  N I  +GA A+A++
Sbjct: 235 LAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRGARAVAKL 294

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L ++S + +L+L+ N + A GA+AL+  L  +  + +L L   +I   G + +A  L+ N
Sbjct: 295 L-NHSRLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALAHALQTN 353

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
           +T+ +L L +N L +   +  + +   ++ + S+      +L  N++   G K L +   
Sbjct: 354 DTLVVLHLGSNELSEPTATLLSQVLSVNTTLASV------NLSCNHIGPDGGKQLLEGM- 406

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
             N  +   DL   E+  +  + + QALKAN++ A
Sbjct: 407 ADNRTVVEFDLRLAEVGQESEYLMGQALKANQEAA 441



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 10/208 (4%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFF--------LAESLGYNQTAEEVSFAANGITAAGIKAF 210
           +EL     V   G NF +  LF         LA +L   +T + +    + +T    +  
Sbjct: 205 EELHLVYGVRDCGMNF-EWNLFLFTHRDCRSLAGALKACRTLKVLKLTRSRVTDEKARIL 263

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L  + AL+ L+LS N IGD G + +  +L +++ +  L LS+  +R  GA+A+A  L
Sbjct: 264 VHGLLDHPALQELDLSHNLIGDRGARAVAKLL-NHSRLRALNLSNNRVRAPGAQALARAL 322

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            +N+ L  L L  N I+  G  +LA AL  N T+  LHL  N      A  L++ L  N 
Sbjct: 323 AHNTTLTSLNLRLNRIEDEGGQALAHALQTNDTLVVLHLGSNELSEPTATLLSQVLSVNT 382

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRK 358
           +L  ++L  N IG +G + L+ G++  +
Sbjct: 383 TLASVNLSCNHIGPDGGKQLLEGMADNR 410



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 1/187 (0%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K  R    + ++     DE    L   L  +   +E+  + N I   G +A   +L  + 
Sbjct: 240 KACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRGARAVAKLLNHS- 298

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L+ LNLS N +   G + L   L  N  +  L L    + DEG +A+A  L+ N  L V
Sbjct: 299 RLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALAHALQTNDTLVV 358

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +N +     T L++ L  N+T+ S++L+ N+ G  G   L +G+  N+++ E  L 
Sbjct: 359 LHLGSNELSEPTATLLSQVLSVNTTLASVNLSCNHIGPDGGKQLLEGMADNRTVVEFDLR 418

Query: 339 GNSIGDE 345
              +G E
Sbjct: 419 LAEVGQE 425



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 66/235 (28%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            H+   +++C      NL++    D     +A ALK  RT+  + L  + +  + A  + 
Sbjct: 207 LHLVYGVRDCGMNFEWNLFLFTHRD--CRSLAGALKACRTLKVLKLTRSRVTDEKARILV 264

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L D+  +  LDL++N                             IG  GA  VA +L 
Sbjct: 265 HGLLDHPALQELDLSHN----------------------------LIGDRGARAVAKLLN 296

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
           ++  +  L+L  N +R                                  GA+ LA++  
Sbjct: 297 HSR-LRALNLSNNRVR--------------------------------APGAQALARAL- 322

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
             N  LTS++L  N I D+G  A+A AL+ N+ + V  L+L +N L++   + L+
Sbjct: 323 AHNTTLTSLNLRLNRIEDEGGQALAHALQTNDTLVV--LHLGSNELSEPTATLLS 375


>gi|76607731|ref|XP_590280.2| PREDICTED: leucine-rich repeat-containing protein 34 [Bos taurus]
 gi|297471139|ref|XP_002684978.1| PREDICTED: leucine-rich repeat-containing protein 34 [Bos taurus]
 gi|296491193|tpg|DAA33266.1| TPA: nucleotide-binding oligomerization domain containing 1-like
           [Bos taurus]
          Length = 451

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 164/376 (43%), Gaps = 23/376 (6%)

Query: 114 MPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQ--------TLNEFAKELR--- 162
           +P  SR   P     + SV A    L  +   L  E  Q         L E  KE+    
Sbjct: 16  LPASSRTPTPAWAAADDSVSASIGGLQEYYYDLCMEKSQEIKPFILQILQEVDKEIEKGS 75

Query: 163 -------AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
                  A +S  +SG     E  + L   L  N     +    N ++  G      +LQ
Sbjct: 76  VGITLNIAGNSRSVSGERVTGEDFWILCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQ 135

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L  LNL  N IG EG + +   L  N  ++ L+++   + ++G    A +L+ NS 
Sbjct: 136 KQQNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMTGNKIENKGGMFFAAMLQINSS 195

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--YGGALGANA-LAKGLEGNKSL 332
           L  L+L +  +      + A  L +N TI+ L+LN    YG    +   L   L+ N+ L
Sbjct: 196 LEKLDLGDCDLGMPSVIAFATVLTQNQTIKGLNLNRPILYGEQEESTVHLGHMLKENQCL 255

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            ELH+  + I + G++ L   L   +  L  LD+  N I+  G   +A+ +K+  +L  I
Sbjct: 256 VELHMCKHDIKNCGMKQLCDALHLNR-SLQYLDVSCNKITQDGMKCLADVLKSNTTLEVI 314

Query: 393 NLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +L  N + + GA  ++DAL   NRT+  + +  NNI  KG  A+++ +K N  ++ + + 
Sbjct: 315 DLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYIW 374

Query: 452 YNPIGADGAKALSEVL 467
            N        A S+++
Sbjct: 375 GNKFDEATCVAYSDLI 390



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 128/258 (49%), Gaps = 16/258 (6%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +S  GA++ A+ ++  ++L+++NL  NDIG EG E IA AL +NRT+  + + 
Sbjct: 115 LDVRYNLLSDVGAYYAAKLLQKQQNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMT 174

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  L L    +
Sbjct: 175 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMPSVIAFATVLTQNQTIKGLNLNRPIL 234

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
                E    +  ML+ N  +  L +  + +++  C    G+     A++  + + +  +
Sbjct: 235 YGEQEESTVHLGHMLKENQCLVELHMCKHDIKN--C----GMKQLCDALHLNRSLQYLDV 288

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN----EDVAVTS 594
             N +   G KCLA   K  N  L  IDL+FN + + GA  ++ AL ++    + ++V S
Sbjct: 289 SCNKITQDGMKCLADVLK-SNTTLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVS 347

Query: 595 LNLANNFLTKFGQSALTD 612
            N+    L    QS  T+
Sbjct: 348 NNIEGKGLVALSQSMKTN 365



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 3/246 (1%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   +A++L  N+T + +    N I   G   F  +LQ N +L+ L+L    +G 
Sbjct: 149 DIGPEGGELIAKALHKNRTLKHLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGM 208

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
             V     +L  N  ++ L L+   L   ++E    +  +LK N  L  L +  + I   
Sbjct: 209 PSVIAFATVLTQNQTIKGLNLNRPILYGEQEESTVHLGHMLKENQCLVELHMCKHDIKNC 268

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   L +AL  N +++ L ++ N     G   LA  L+ N +L  + L  N + + G   
Sbjct: 269 GMKQLCDALHLNRSLQYLDVSCNKITQDGMKCLADVLKSNTTLEVIDLSFNRMENAGANY 328

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L   L+S    L  L + +N+I  KG   +++ +K   +L  I ++ N   +      +D
Sbjct: 329 LSDALASHNRTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYIWGNKFDEATCVAYSD 388

Query: 410 ALKQNR 415
            +   R
Sbjct: 389 LIHTGR 394



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 58/234 (24%)

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           + RVLK+NS I  LD+ YN +   GA   +++L+   N+  L L +  IG  G E +A  
Sbjct: 102 LCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQKQQNLIYLNLMFNDIGPEGGELIAKA 161

Query: 495 LRYNNTISILDLRANGLRD----------EVCSG--------CN---------------- 520
           L  N T+  L +  N + +          ++ S         C+                
Sbjct: 162 LHKNRTLKHLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMPSVIAFATVLTQN 221

Query: 521 ----GLSFFHSAIY--------SLKHMLFYSLCINYLQ---------GAKCLAQSFKVVN 559
               GL+     +Y         L HML  + C+  L          G K L  +   +N
Sbjct: 222 QTIKGLNLNRPILYGEQEESTVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDALH-LN 280

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +L  +D++ N+I  DG   +A  LK+N  + V  ++L+ N +   G + L+DA
Sbjct: 281 RSLQYLDVSCNKITQDGMKCLADVLKSNTTLEV--IDLSFNRMENAGANYLSDA 332


>gi|332227825|ref|XP_003263091.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Nomascus leucogenys]
          Length = 1040

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 136/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L++N +  +G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPAECAALAFVLQHLRRPVALQLDHNSVGDTGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N I  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            A+ +   L  N+TI  + LR N
Sbjct: 1000 AKALLQALERNDTILEVWLRGN 1021



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPAECAALAFVLQHLRRPVALQLDHNSVGDTGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 831  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N ++DE VCS   GL        SLK +   + CI YL GAK L Q
Sbjct: 951  LAKNVMLEELCLEENHIQDEGVCSLAEGL----KKNSSLKILKLSNNCITYL-GAKALLQ 1005

Query: 554  SFK 556
            + +
Sbjct: 1006 ALE 1008



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 88/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N I   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN    E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGNIFSLEEVDKL 1031



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 1/205 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N I  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGN 425
              GA+ +  AL++N TI  + L GN
Sbjct: 997  YLGAKALLQALERNDTILEVWLRGN 1021



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 88/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 848  LALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQVLAEGLRGNTSLQFLGFW 907

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 908  GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHI 967

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG  ++AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 968  QDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGN 1021



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 88/196 (44%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G +AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAKALLQ 1005

Query: 353  GLSSRKGKLAVLDIGN 368
             L      L V   GN
Sbjct: 1006 ALERNDTILEVWLRGN 1021


>gi|156355238|ref|XP_001623578.1| predicted protein [Nematostella vectensis]
 gi|156210293|gb|EDO31478.1| predicted protein [Nematostella vectensis]
          Length = 410

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 10/294 (3%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N    EV    +G+ A G KA    L SN ++  LNLS N +G EG   + ++L +N  +
Sbjct: 29  NMLEAEVDIKHHGLGAMGSKAIAIALVSNTSVVKLNLSDNWMGPEGASYVAEMLRENCYI 88

Query: 249 ERL-------QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
             L        +S   L D G+++IA++L +N  +  L  N N  D      LAEA+  N
Sbjct: 89  TDLLCEVLSDDMSENKLGDHGSESIADVLLHNPNIHRLTANGNGFDEKAAKILAEAIKLN 148

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           + ++ L L+ N  G      LA  L  N+++ EL+L  N + + G  A+   L      L
Sbjct: 149 NRLKYLCLSHNKFGEKAGLELAPALAANETISELNLSWNHLRNRGACAIALSLKENI-TL 207

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
            +L++  N     GA  + E +K   SLL ++L  N I  EGA  +   L  N T+  + 
Sbjct: 208 KILNLAWNGFGNDGALAMGEALKVNASLLELDLTNNRITAEGAVLLGKGLTINTTLQVLK 267

Query: 422 LGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           +G N + S GA AI   +K+N  S +  ++L+   +  D  +   EV+    N+
Sbjct: 268 IGKNPMQSAGAYAILNAMKNNPESALVEVELSDITVNNDFLQLCGEVIAARPNV 321



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 8/230 (3%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL-------HLHGNSI 342
           G  ++A AL+ N+++  L+L+ N+ G  GA+ +A+ L  N  + +L        +  N +
Sbjct: 46  GSKAIAIALVSNTSVVKLNLSDNWMGPEGASYVAEMLRENCYITDLLCEVLSDDMSENKL 105

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G  ++   L      +  L    N    K A  +AE IK    L ++ L  N  G++
Sbjct: 106 GDHGSESIADVLLHNP-NIHRLTANGNGFDEKAAKILAEAIKLNNRLKYLCLSHNKFGEK 164

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              ++A AL  N TI+ ++L  N++ ++GA AIA  LK+N  +  L+LA+N  G DGA A
Sbjct: 165 AGLELAPALAANETISELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFGNDGALA 224

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           + E LK + ++  L L   +I A GA  +   L  N T+ +L +  N ++
Sbjct: 225 MGEALKVNASLLELDLTNNRITAEGAVLLGKGLTINTTLQVLKIGKNPMQ 274



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 22/288 (7%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK----- 387
           E+ +  + +G  G +A+   L S    +  L++ +N +  +GA +VAE ++ NC      
Sbjct: 34  EVDIKHHGLGAMGSKAIAIALVSNTS-VVKLNLSDNWMGPEGASYVAEMLRENCYITDLL 92

Query: 388 -SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             +L  ++  N +GD G+E IAD L  N  I  +   GN    K A  +A  +K N+ + 
Sbjct: 93  CEVLSDDMSENKLGDHGSESIADVLLHNPNIHRLTANGNGFDEKAAKILAEAIKLNNRLK 152

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            L L++N  G      L+  L  +  I+ L L W  +   GA  +A  L+ N T+ IL+L
Sbjct: 153 YLCLSHNKFGEKAGLELAPALAANETISELNLSWNHLRNRGACAIALSLKENITLKILNL 212

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTS 564
             NG       G +G      A+     +L   L  N +  +GA  L +    +N  L  
Sbjct: 213 AWNGF------GNDGALAMGEALKVNASLLELDLTNNRITAEGAVLLGKGL-TINTTLQV 265

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA-----NNFLTKFGQ 607
           + +  N ++  GA+AI  A+K N + A+  + L+     N+FL   G+
Sbjct: 266 LKIGKNPMQSAGAYAILNAMKNNPESALVEVELSDITVNNDFLQLCGE 313



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 8/228 (3%)

Query: 129 NWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY 188
           NW    G    + +  ++ RE+    +   + L    S DMS    GD G   +A+ L +
Sbjct: 68  NWMGPEG----ASYVAEMLRENCYITDLLCEVL----SDDMSENKLGDHGSESIADVLLH 119

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++   NG      K     ++ N  LK L LS N  G++    L   L  N  +
Sbjct: 120 NPNIHRLTANGNGFDEKAAKILAEAIKLNNRLKYLCLSHNKFGEKAGLELAPALAANETI 179

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L LS   LR+ GA AIA  LK N  L++L L  N     G  ++ EAL  N+++  L 
Sbjct: 180 SELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFGNDGALAMGEALKVNASLLELD 239

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           L  N   A GA  L KGL  N +L+ L +  N +   G  A+++ + +
Sbjct: 240 LTNNRITAEGAVLLGKGLTINTTLQVLKIGKNPMQSAGAYAILNAMKN 287



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 7/167 (4%)

Query: 156 EFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E A  L A    S +++S  +  + G   +A SL  N T + ++ A NG    G  A   
Sbjct: 168 ELAPALAANETISELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFGNDGALAMGE 227

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L+ N +L  L+L+ N I  EG   L   L  N  ++ L++    ++  GA AI   +KN
Sbjct: 228 ALKVNASLLELDLTNNRITAEGAVLLGKGLTINTTLQVLKIGKNPMQSAGAYAILNAMKN 287

Query: 273 N--SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           N  S L  +EL++  ++        E +     ++  H  G  GGAL
Sbjct: 288 NPESALVEVELSDITVNNDFLQLCGEVIAARPNVKITH--GGSGGAL 332


>gi|114635946|ref|XP_521822.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Pan
           troglodytes]
          Length = 1093

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 18/328 (5%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEVCSGCNGLSF----FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            LDL +N L+D      NG+      F     +L+ +     C+  L  A CL  +  ++
Sbjct: 904 HLDLGSNWLQD------NGVKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVIL 954

Query: 559 NEA-LTSIDLAFNEIRDDGAFAIAQALK 585
           N   L S+DL  N+++DDG   +  AL+
Sbjct: 955 NNPNLRSLDLGNNDLQDDGVKILCDALR 982



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 6/311 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGL 511
            +  ++L  N L
Sbjct: 1016 LIKMNLTQNTL 1026



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 60/258 (23%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L + +   E +S  + G+T AG +     L SN  L  L L
Sbjct: 791  LNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCL 850

Query: 226  SGNPIGDEGVKCLCDI-----------------------------LVDNAGVERLQLSSV 256
            + N +GD GVK + D                              L+ N  +  L L S 
Sbjct: 851  ADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSN 910

Query: 257  DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--- 312
             L+D G K + ++ ++ S  L+ LEL   ++  +    LA  +L N  +RSL L  N   
Sbjct: 911  WLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQ 970

Query: 313  ------------------------YGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                                    Y G  +L    L+  L  NK L +++L  N++G EG
Sbjct: 971  DDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEG 1030

Query: 347  IRALMSGLSSRKGKLAVL 364
            I  L   L S K KL VL
Sbjct: 1031 IVKLYKVLKSPKCKLQVL 1048


>gi|297678242|ref|XP_002816992.1| PREDICTED: LOW QUALITY PROTEIN: T-complex-associated
           testis-expressed protein 1 [Pongo abelii]
          Length = 556

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 99/184 (53%), Gaps = 2/184 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKAL 463
            K L
Sbjct: 435 GKQL 438



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   +   +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLXGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I   L  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQVLYANR 474



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L+ N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAK-LLSHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++   +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLXGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I +VL  N
Sbjct: 461 ESEYLIGQVLYAN 473



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + +   +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLXGMSDN 445

Query: 499 NTISILDLRANGLRDE 514
            T+   DLR + +  E
Sbjct: 446 KTLLEFDLRLSDVAQE 461



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   +   +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLXGMSDNKTLLEFDLRLSD 457



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 QNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L  G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLXGMSDNKTLLEFDLRLSDVAQE 461


>gi|395839574|ref|XP_003792663.1| PREDICTED: protein NLRC5 [Otolemur garnettii]
          Length = 1877

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 160/356 (44%), Gaps = 10/356 (2%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
            EL+ F    ++      +GL  LA  LG     EE+  + N  +  G KA  G L+    
Sbjct: 1506 ELKKFR---LTSSYVSTKGLAHLASGLGPCHHLEELDLSNNQFSEEGTKALIGALEGKCR 1562

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            LK L+LS  P+G   +  L   L     ++ L+LS   + D G   I+E+++  + L  L
Sbjct: 1563 LKRLDLSHLPLGGSNLAMLTQGLSRMTLLQSLRLSRNSIGDLGCCHISEVVRTATSLEEL 1622

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L+ N I  +G   LA  L     +R + L+ N  G  G   LA+ L   + L EL L  
Sbjct: 1623 GLSYNQIGDAGAQHLAAILPGLPKLRKIDLSVNGIGMAGGVQLAESLALCRHLEELMLGC 1682

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N++GD  +  L   L+    +L +L + ++ +  KG   +++ +     +  INL  N +
Sbjct: 1683 NALGDPTVLGLARELTQ---QLKILHLPSSHLGPKGVLGLSQALDGHPHMEEINLAENSL 1739

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
                AE +    K    +  IDL    I ++ A  +A        +  + L++N +G + 
Sbjct: 1740 ----AEGVLHFCKGLPLLRQIDLVSCKIDNQNAKLLAAGFALCPALEVILLSWNFLGDEA 1795

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
            A  L+ +L     +  + L   QI A GA  +A+ L   ++I ++ L  N +  +V
Sbjct: 1796 AAELARILPQMSQLKRVDLEKNQITAWGAWLLAEGLALGSSIRVIRLWNNPIPPDV 1851



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 152/364 (41%), Gaps = 17/364 (4%)

Query: 246  AGVERLQLSSVDLRDEGAKAIAELLKNN---SILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L D+   +   L       S L+   L ++ +   G   LA  L    
Sbjct: 1474 ARLQQLSLSQVNLCDDDDASFLLLQTLLPTLSELKKFRLTSSYVSTKGLAHLASGLGPCH 1533

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL   LEG   L+ L L    +G   +  L  GL SR   L 
Sbjct: 1534 HLEELDLSNNQFSEEGTKALIGALEGKCRLKRLDLSHLPLGGSNLAMLTQGL-SRMTLLQ 1592

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  + L  N IGD GA+ +A  L     +  IDL
Sbjct: 1593 SLRLSRNSIGDLGCCHISEVVRTATSLEELGLSYNQIGDAGAQHLAAILPGLPKLRKIDL 1652

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              N I   G   +A  L     +  L L  N +G      L+  L     +  L L    
Sbjct: 1653 SVNGIGMAGGVQLAESLALCRHLEELMLGCNALGDPTVLGLARELT--QQLKILHLPSSH 1710

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
            +G  G   ++  L  +  +  ++L  N L + V   C GL         L+ +   S  I
Sbjct: 1711 LGPKGVLGLSQALDGHPHMEEINLAENSLAEGVLHFCKGLPL-------LRQIDLVSCKI 1763

Query: 543  NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            +  Q AK LA  F +   AL  I L++N + D+ A  +A+ L       +  ++L  N +
Sbjct: 1764 DN-QNAKLLAAGFALC-PALEVILLSWNFLGDEAAAELARILPQMSQ--LKRVDLEKNQI 1819

Query: 603  TKFG 606
            T +G
Sbjct: 1820 TAWG 1823



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/378 (21%), Positives = 148/378 (39%), Gaps = 77/378 (20%)

Query: 172  RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
            R  GD     L+ SL       ++    + ITA GIK     L S   L+ ++   N + 
Sbjct: 705  RKCGDAFAEALSRSLPTMGRLRKLGLTGSKITALGIKHLVNALPSCPQLEEVSFQDNQLK 764

Query: 232  DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            D+ +  + ++L     ++RL LS  D+ +     +A++      +R+L++    + +   
Sbjct: 765  DQEILKIVELLPCLPRLQRLDLSGNDISESTLLCLAQVALTCPTIRMLQVRETDLIFL-L 823

Query: 292  TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK-----------------SLRE 334
            +  AE   E      L  NG++     +  L   L+  +                  L E
Sbjct: 824  SPAAETTAELPRTPDLQENGSWKKEAQSRILTLRLQKCQLRVYDVERLINLLREGPCLEE 883

Query: 335  LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWI 392
            + L GN + DEG R LM+  + +      LD+ +N +S  G +HV   +  C++L  L I
Sbjct: 884  VDLSGNQLEDEGCR-LMAEATPQLHITRKLDLSDNGLSVDGLYHVLSAMSMCRTLKELHI 942

Query: 393  NL----------------------------YMNDIGDE---GAEKI--------ADALKQ 413
            +L                             M+ +  E   G+++I        A  L+Q
Sbjct: 943  SLLHKAVVLMFAQELEEQAEPQKRAAFLDSLMSQMPSELPPGSQRIRLTHCGFRAKHLQQ 1002

Query: 414  ------------NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
                        +     +D  GN +  +GA+ +A++L +   + SL+L+ N    D   
Sbjct: 1003 LCEVLGRSCHLGHLQHLHLDFSGNALGDEGAALLAQLLPELGALQSLNLSENSFTLDAVL 1062

Query: 462  ALSEVLK-----FHGNIN 474
            +L++        FH N++
Sbjct: 1063 SLAQCFSTLQWLFHLNVS 1080



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 97/255 (38%), Gaps = 23/255 (9%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L  +N  +  +  TSL   L        +HL+   G  L  N   + L G   +  L   
Sbjct: 648 LPFHNFPLTCADLTSLTNILKHREA--PIHLDFE-GCPLEPNC-PEALVGCGPIENLSFK 703

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
               GD    AL   L +  G+L  L +  + I+A G  H+   + +C  L  ++   N 
Sbjct: 704 SRKCGDAFAEALSRSLPT-MGRLRKLGLTGSKITALGIKHLVNALPSCPQLEEVSFQDNQ 762

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-------TSLDLA 451
           + D+   KI + L     +  +DL GN+I       +A+V      I       T L   
Sbjct: 763 LKDQEILKIVELLPCLPRLQRLDLSGNDISESTLLCLAQVALTCPTIRMLQVRETDLIFL 822

Query: 452 YNPIGADGAKALSEVLKFHGN----------INTLKLGWCQIGASGAEFVADMLRYNNTI 501
            +P  A+    L        N          I TL+L  CQ+     E + ++LR    +
Sbjct: 823 LSP-AAETTAELPRTPDLQENGSWKKEAQSRILTLRLQKCQLRVYDVERLINLLREGPCL 881

Query: 502 SILDLRANGLRDEVC 516
             +DL  N L DE C
Sbjct: 882 EEVDLSGNQLEDEGC 896



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 132/360 (36%), Gaps = 65/360 (18%)

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +L+ +L     +R L L G+   ALG   L   L     L E+    N + D+ I  ++ 
Sbjct: 714  ALSRSLPTMGRLRKLGLTGSKITALGIKHLVNALPSCPQLEEVSFQDNQLKDQEILKIVE 773

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY----------------- 395
             L     +L  LD+  N IS      +A+    C ++  + +                  
Sbjct: 774  LLPCLP-RLQRLDLSGNDISESTLLCLAQVALTCPTIRMLQVRETDLIFLLSPAAETTAE 832

Query: 396  ---MNDIGDEGA------------------------EKIADALKQNRTITTIDLGGNNIH 428
                 D+ + G+                        E++ + L++   +  +DL GN + 
Sbjct: 833  LPRTPDLQENGSWKKEAQSRILTLRLQKCQLRVYDVERLINLLREGPCLEEVDLSGNQLE 892

Query: 429  SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK-----LGWCQI 483
             +G   +A       +   LDL+ N +  DG   L  VL       TLK     L    +
Sbjct: 893  DEGCRLMAEATPQLHITRKLDLSDNGLSVDG---LYHVLSAMSMCRTLKELHISLLHKAV 949

Query: 484  GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
                A+ + +        + LD   + +  E+  G   +   H   +  KH+    LC  
Sbjct: 950  VLMFAQELEEQAEPQKRAAFLDSLMSQMPSELPPGSQRIRLTHCG-FRAKHL--QQLC-- 1004

Query: 544  YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
                 + L +S  + +     +D + N + D+GA  +AQ L   E  A+ SLNL+ N  T
Sbjct: 1005 -----EVLGRSCHLGHLQHLHLDFSGNALGDEGAALLAQLLP--ELGALQSLNLSENSFT 1057



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 173/465 (37%), Gaps = 77/465 (16%)

Query: 185  SLGYNQTAEE----VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +L +  T E+      F   G++   + +    L     L  L+LS N +GD+G++CL +
Sbjct: 1217 TLHFRSTQEQEGVCCGFTGCGLSQEHVVSLCERLSKCEDLSQLDLSANLLGDDGLRCLLE 1276

Query: 241  ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
             L        L LS   L  EGA  + E L + S +R      ++I  S  +   +   +
Sbjct: 1277 CLPQVPISGSLDLSHNSLSQEGALYLVETLPSCSRVR----EASVILGSEQSFRIQFSKQ 1332

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS------GL 354
                ++L L+    G    + LA GL  +  L EL L   S+  E +  L+S      GL
Sbjct: 1333 EEAGKTLRLSECSFGPEHMSRLATGLSQSLQLMELTLTRCSLSQEQLMVLLSLVRRPAGL 1392

Query: 355  SS---------RKGKLAVLDI-----GN-NSISAKG------------------------ 375
             S         R G LA+L++     GN   IS  G                        
Sbjct: 1393 LSLRVEEPWVGRAGVLALLEVCAQASGNVTEISISGTQQQLCVRLEFPHQKENTDAVALR 1452

Query: 376  ----------AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID---L 422
                      +  V + ++ C  L  ++L   ++ D+             T++ +    L
Sbjct: 1453 LAYCDLETHHSLLVRQLMETCARLQQLSLSQVNLCDDDDASFLLLQTLLPTLSELKKFRL 1512

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              + + +KG + +A  L     +  LDL+ N    +G KAL   L+    +  L L    
Sbjct: 1513 TSSYVSTKGLAHLASGLGPCHHLEELDLSNNQFSEEGTKALIGALEGKCRLKRLDLSHLP 1572

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
            +G S    +   L     +  L L  N + D    GC  +S       SL+      L +
Sbjct: 1573 LGGSNLAMLTQGLSRMTLLQSLRLSRNSIGD---LGCCHISEVVRTATSLEE-----LGL 1624

Query: 543  NYLQGAKCLAQSFKVVNEALT---SIDLAFNEIRDDGAFAIAQAL 584
            +Y Q     AQ    +   L     IDL+ N I   G   +A++L
Sbjct: 1625 SYNQIGDAGAQHLAAILPGLPKLRKIDLSVNGIGMAGGVQLAESL 1669



 Score = 42.4 bits (98), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 85/225 (37%), Gaps = 26/225 (11%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q L      L     +D+S    G  G   LAESL   +  EE+    N +    +    
Sbjct: 1635 QHLAAILPGLPKLRKIDLSVNGIGMAGGVQLAESLALCRHLEELMLGCNALGDPTVLGLA 1694

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS----------------- 254
              L     LK L+L  + +G +GV  L   L  +  +E + L+                 
Sbjct: 1695 RELTQQ--LKILHLPSSHLGPKGVLGLSQALDGHPHMEEINLAENSLAEGVLHFCKGLPL 1752

Query: 255  -------SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
                   S  + ++ AK +A        L V+ L+ N +       LA  L + S ++ +
Sbjct: 1753 LRQIDLVSCKIDNQNAKLLAAGFALCPALEVILLSWNFLGDEAAAELARILPQMSQLKRV 1812

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
             L  N   A GA  LA+GL    S+R + L  N I  +  + L S
Sbjct: 1813 DLEKNQITAWGAWLLAEGLALGSSIRVIRLWNNPIPPDVAQRLQS 1857


>gi|291407748|ref|XP_002720226.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12
           (predicted)-like [Oryctolagus cuniculus]
          Length = 1010

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 5/270 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRS 306
           ++ L+L    L     + ++ + + N  L  LE   N ++ SG   L E L   N  ++ 
Sbjct: 661 IKDLKLIFCHLTASCGRDLSSVFETNQYLTDLEFVKNTLEDSGLKLLCEGLKRPNCILQK 720

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L           ALA  L  N+ L EL L  N +GD G++ L  GL     K+  L++
Sbjct: 721 LRLYRCLISPASCGALAAVLSTNQHLTELDLSENPLGDTGVKYLCEGLRHANCKVEKLEL 780

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
              S+SA     +A+ + + +SL  + L  N I D G + + + LKQ       DL    
Sbjct: 781 SECSLSAACCEPLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQP-DCQLKDLALWT 839

Query: 427 IHSKGASA--IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQI 483
            H  GA    +   L  N  +  LDL+ N +G +G + L E LK  +  + TL L  C +
Sbjct: 840 CHLTGACCQDLCNALYTNEHLRDLDLSDNALGDEGMQVLCEGLKHPYCKLQTLWLAECHL 899

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRD 513
             +    +A +L  N  +++LDL  N LRD
Sbjct: 900 TDACCGALASVLSRNENLTLLDLSGNHLRD 929



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 13/244 (5%)

Query: 176 DEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           D GL  L E L   N   +++      I+ A   A   VL +N  L  L+LS NP+GD G
Sbjct: 701 DSGLKLLCEGLKRPNCILQKLRLYRCLISPASCGALAAVLSTNQHLTELDLSENPLGDTG 760

Query: 235 VKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           VK LC+ L   N  VE+L+LS   L     + +A++L +   L  L L NN I+  G   
Sbjct: 761 VKYLCEGLRHANCKVEKLELSECSLSAACCEPLAQVLSSTRSLTRLLLINNKIEDLGLKL 820

Query: 294 LAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
           L E L      L++  + + HL G          L   L  N+ LR+L L  N++GDEG+
Sbjct: 821 LCEGLKQPDCQLKDLALWTCHLTGA-----CCQDLCNALYTNEHLRDLDLSDNALGDEGM 875

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           + L  GL     KL  L +    ++      +A  +   ++L  ++L  N + D G + +
Sbjct: 876 QVLCEGLKHPYCKLQTLWLAECHLTDACCGALASVLSRNENLTLLDLSGNHLRDFGVQML 935

Query: 408 ADAL 411
            DAL
Sbjct: 936 CDAL 939



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 3/269 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRD 260
           +TA+  +    V ++N  L  L    N + D G+K LC+ L   N  +++L+L    +  
Sbjct: 671 LTASCGRDLSSVFETNQYLTDLEFVKNTLEDSGLKLLCEGLKRPNCILQKLRLYRCLISP 730

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGA 319
               A+A +L  N  L  L+L+ N +  +G   L E L   N  +  L L+     A   
Sbjct: 731 ASCGALAAVLSTNQHLTELDLSENPLGDTGVKYLCEGLRHANCKVEKLELSECSLSAACC 790

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             LA+ L   +SL  L L  N I D G++ L  GL     +L  L +    ++      +
Sbjct: 791 EPLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLALWTCHLTGACCQDL 850

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
              +   + L  ++L  N +GDEG + + + LK     + T+ L   ++      A+A V
Sbjct: 851 CNALYTNEHLRDLDLSDNALGDEGMQVLCEGLKHPYCKLQTLWLAECHLTDACCGALASV 910

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVL 467
           L  N  +T LDL+ N +   G + L + L
Sbjct: 911 LSRNENLTLLDLSGNHLRDFGVQMLCDAL 939



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 124/285 (43%), Gaps = 10/285 (3%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           I+ L L   +  A     L+   E N+ L +L    N++ D G++ L  GL      L  
Sbjct: 661 IKDLKLIFCHLTASCGRDLSSVFETNQYLTDLEFVKNTLEDSGLKLLCEGLKRPNCILQK 720

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDL 422
           L +    IS      +A  +   + L  ++L  N +GD G + + + L+  N  +  ++L
Sbjct: 721 LRLYRCLISPASCGALAAVLSTNQHLTELDLSENPLGDTGVKYLCEGLRHANCKVEKLEL 780

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWC 481
              ++ +     +A+VL     +T L L  N I   G K L E LK     +  L L  C
Sbjct: 781 SECSLSAACCEPLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLALWTC 840

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSL 540
            +  +  + + + L  N  +  LDL  N L DE +   C GL   +  + +L    + + 
Sbjct: 841 HLTGACCQDLCNALYTNEHLRDLDLSDNALGDEGMQVLCEGLKHPYCKLQTL----WLAE 896

Query: 541 CINYLQGAKCLA-QSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           C  +L  A C A  S    NE LT +DL+ N +RD G   +  AL
Sbjct: 897 C--HLTDACCGALASVLSRNENLTLLDLSGNHLRDFGVQMLCDAL 939



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 3/213 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +  + +D+S    GD G+ +L E L + N   E++  +   ++AA  +    VL S  +L
Sbjct: 744 QHLTELDLSENPLGDTGVKYLCEGLRHANCKVEKLELSECSLSAACCEPLAQVLSSTRSL 803

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L L  N I D G+K LC+ L   +  ++ L L +  L     + +   L  N  LR L
Sbjct: 804 TRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLALWTCHLTGACCQDLCNALYTNEHLRDL 863

Query: 280 ELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +L++N +   G   L E L      +++L L   +       ALA  L  N++L  L L 
Sbjct: 864 DLSDNALGDEGMQVLCEGLKHPYCKLQTLWLAECHLTDACCGALASVLSRNENLTLLDLS 923

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           GN + D G++ L   L     KL    I  + +
Sbjct: 924 GNHLRDFGVQMLCDALIHPVCKLQTFYIDTDHL 956



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 15/213 (7%)

Query: 397 NDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           N + D G + + + LK+ N  +  + L    I      A+A VL  N  +T LDL+ NP+
Sbjct: 697 NTLEDSGLKLLCEGLKRPNCILQKLRLYRCLISPASCGALAAVLSTNQHLTELDLSENPL 756

Query: 456 GADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G  G K L E L+ H N  +  L+L  C + A+  E +A +L    +++ L L  N + D
Sbjct: 757 GDTGVKYLCEGLR-HANCKVEKLELSECSLSAACCEPLAQVLSSTRSLTRLLLINNKIED 815

Query: 514 -EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFN 570
             +   C GL         LK +  ++    +L GA C  L  +    NE L  +DL+ N
Sbjct: 816 LGLKLLCEGLK---QPDCQLKDLALWTC---HLTGACCQDLCNAL-YTNEHLRDLDLSDN 868

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
            + D+G   + + LK +    + +L LA   LT
Sbjct: 869 ALGDEGMQVLCEGLK-HPYCKLQTLWLAECHLT 900


>gi|28827813|ref|NP_789792.1| NACHT, LRR and PYD domains-containing protein 14 [Homo sapiens]
 gi|38372322|sp|Q86W24.1|NAL14_HUMAN RecName: Full=NACHT, LRR and PYD domains-containing protein 14;
           AltName: Full=Nucleotide-binding oligomerization domain
           protein 5
 gi|28436382|gb|AAO18165.1| NALP14 [Homo sapiens]
 gi|30348938|tpg|DAA01240.1| TPA_inf: NOD5 [Homo sapiens]
 gi|162318954|gb|AAI56269.1| NLR family, pyrin domain containing 14 [synthetic construct]
          Length = 1093

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 18/328 (5%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLYHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEVCSGCNGLSF----FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            LDL +N L+D      NG+      F     +L+ +     C+  L  A CL  +  ++
Sbjct: 904 HLDLGSNWLQD------NGVKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVIL 954

Query: 559 NEA-LTSIDLAFNEIRDDGAFAIAQALK 585
           N   L S+DL  N+++DDG   +  AL+
Sbjct: 955 NNPNLRSLDLGNNDLQDDGVKILCDALR 982



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 6/311 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGL 511
            +  ++L  N L
Sbjct: 1016 LIKMNLTQNTL 1026



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 60/258 (23%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L + +   E +S  + G+T AG +     L SN  L  L L
Sbjct: 791  LNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCL 850

Query: 226  SGNPIGDEGVKCLCDI-----------------------------LVDNAGVERLQLSSV 256
            + N +GD GVK + D                              L+ N  +  L L S 
Sbjct: 851  ADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSN 910

Query: 257  DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--- 312
             L+D G K + ++ ++ S  L+ LEL   ++  +    LA  +L N  +RSL L  N   
Sbjct: 911  WLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQ 970

Query: 313  ------------------------YGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                                    Y G  +L    L+  L  NK L +++L  N++G EG
Sbjct: 971  DDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEG 1030

Query: 347  IRALMSGLSSRKGKLAVL 364
            I  L   L S K KL VL
Sbjct: 1031 IVKLYKVLKSPKCKLQVL 1048


>gi|290982526|ref|XP_002673981.1| predicted protein [Naegleria gruberi]
 gi|284087568|gb|EFC41237.1| predicted protein [Naegleria gruberi]
          Length = 363

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 176/384 (45%), Gaps = 82/384 (21%)

Query: 131 SVGAGTNLLSGFTGKLFRESKQ--TLN-----------EFAKELRAFSSVDMSGRNFGDE 177
           S+    N +SG   K   E KQ  +LN           ++  E++  +S+++      DE
Sbjct: 6   SLNVSNNQISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFNNRISDE 65

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G  +++E     +    +  + N I A G K    + Q    L +LN+S N I DEG K 
Sbjct: 66  GAKYISEM----KQLISLDISYNQIGAEGAKFISEMKQ----LTSLNISYNEISDEGAKY 117

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           + ++      +  L +S  D+  EGAK I+E+ +    L  L ++NN I   G    A+ 
Sbjct: 118 ISEM----KQLTSLNISYNDI-SEGAKPISEMKQ----LTSLNVSNNQISGKG----AKY 164

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           + E   + SL+++ N     GA  + +     K L  L +  N I DEG + L     S 
Sbjct: 165 ISEMKQLTSLNISDNQISGKGAKYIGEM----KQLTSLDISNNQISDEGAKFL-----SE 215

Query: 358 KGKLAVLDIGNNSISAKGAFHVAE--------------------YIKNCKSLLWINLYMN 397
             +L  L++ NN IS K A  ++E                    YI   K L  ++++ N
Sbjct: 216 MKQLISLNVSNNQISGKEAKFMSEMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNN 275

Query: 398 DIGDEGAEKIADA---------------LKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            I DEGA+ I++                + + + +T++++  N I+ +GA +I+ + +  
Sbjct: 276 LISDEGAKYISEMKHLTSLDISYNEISHISEMKQLTSLNISFNQINDEGAKSISEMKQ-- 333

Query: 443 SVITSLDLAYNPIGADGAKALSEV 466
             +TSLD++YN IG +GAK +SE+
Sbjct: 334 --LTSLDMSYNRIGGEGAKYISEM 355



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 207/428 (48%), Gaps = 80/428 (18%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N I+  G K    + Q    L +LN+S N IG +G K +          E  QL+
Sbjct: 7   LNVSNNQISGKGAKYISEMKQ----LTSLNISNNRIGGKGAKYIS---------EMKQLT 53

Query: 255 SVDL-----RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           S+++      DEGAK I+E+ +    L  L+++ N I   G    A+ + E   + SL++
Sbjct: 54  SLNIFNNRISDEGAKYISEMKQ----LISLDISYNQIGAEG----AKFISEMKQLTSLNI 105

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N     GA  +++     K L  L++  N I  EG + +     S   +L  L++ NN
Sbjct: 106 SYNEISDEGAKYISEM----KQLTSLNISYNDIS-EGAKPI-----SEMKQLTSLNVSNN 155

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            IS KGA    +YI   K L  +N+  N I  +GA+ I + +KQ   +T++D+  N I  
Sbjct: 156 QISGKGA----KYISEMKQLTSLNISDNQISGKGAKYIGE-MKQ---LTSLDISNNQISD 207

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           +GA    + L +   + SL+++ N I    AK +SE+ +    + +L +   QI    A+
Sbjct: 208 EGA----KFLSEMKQLISLNVSNNQISGKEAKFMSEMKQ----LTSLNISNNQISDERAK 259

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK 549
           ++++M +    ++ LD+  N + DE      G  +    I  +KH+    +  N +    
Sbjct: 260 YISEMKQ----LTSLDIFNNLISDE------GAKY----ISEMKHLTSLDISYNEISHIS 305

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
            + Q        LTS++++FN+I D+GA +I++  +      +TSL+++ N +   G   
Sbjct: 306 EMKQ--------LTSLNISFNQINDEGAKSISEMKQ------LTSLDMSYNRIGGEGAKY 351

Query: 610 LTDAKDLV 617
           +++ K L 
Sbjct: 352 ISEMKHLT 359



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 143/260 (55%), Gaps = 44/260 (16%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L  L++ NN IS KGA    +YI   K L  +N+  N IG +GA+ I++ +KQ   +T+
Sbjct: 3   QLTSLNVSNNQISGKGA----KYISEMKQLTSLNISNNRIGGKGAKYISE-MKQ---LTS 54

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +++  N I  +GA  I+ + +    + SLD++YN IGA+GAK +SE+ +    + +L + 
Sbjct: 55  LNIFNNRISDEGAKYISEMKQ----LISLDISYNQIGAEGAKFISEMKQ----LTSLNIS 106

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
           + +I   GA+++++M +    ++ L++  N    ++  G   +S        +K +   +
Sbjct: 107 YNEISDEGAKYISEMKQ----LTSLNISYN----DISEGAKPIS-------EMKQLTSLN 151

Query: 540 LCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           +  N +  +GAK +++      + LTS++++ N+I   GA  I +  +      +TSL++
Sbjct: 152 VSNNQISGKGAKYISEM-----KQLTSLNISDNQISGKGAKYIGEMKQ------LTSLDI 200

Query: 598 ANNFLTKFGQSALTDAKDLV 617
           +NN ++  G   L++ K L+
Sbjct: 201 SNNQISDEGAKFLSEMKQLI 220


>gi|405975257|gb|EKC39838.1| T-complex-associated testis-expressed protein 1 [Crassostrea gigas]
          Length = 521

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 109/197 (55%), Gaps = 3/197 (1%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+ +   K L+   LH + + D+ +R L+S +    G L  LD+ +N IS +GA  + +
Sbjct: 286 LAQCVAATKGLKVFRLHRSKVDDDKVRVLISHILDHPG-LTELDLSHNVISDRGARAIGK 344

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           ++ N   L+ +NL  ND+   GA+ IA AL +N T+T +++  N +  +G  AI + L  
Sbjct: 345 FLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDLNIRLNRLGDEGGQAICKALLK 404

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ + ++++A + +G   A   S+V+  +  + ++ L   ++GA G + + + +  N TI
Sbjct: 405 NTTLCNINMASSDLGEPTAAIFSQVVMQNTTLKSVDLSSNRLGAEGGKQIQEGMEDNTTI 464

Query: 502 SILDLR--ANGLRDEVC 516
           + +DLR   +G   E C
Sbjct: 465 THMDLRLTDSGQEAEYC 481



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 1/196 (0%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK   L  + + D+ V+ L   ++D+ G+  L LS   + D GA+AI + L N+S L  L
Sbjct: 296 LKVFRLHRSKVDDDKVRVLISHILDHPGLTELDLSHNVISDRGARAIGKFLNNHSQLVKL 355

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L +N + +SG  ++A AL +N+T+  L++  N  G  G  A+ K L  N +L  +++  
Sbjct: 356 NLCDNDVRHSGAQAIAHALTKNTTLTDLNIRLNRLGDEGGQAICKALLKNTTLCNINMAS 415

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           + +G E   A+ S +  +   L  +D+ +N + A+G   + E +++  ++  ++L + D 
Sbjct: 416 SDLG-EPTAAIFSQVVMQNTTLKSVDLSSNRLGAEGGKQIQEGMEDNTTITHMDLRLTDS 474

Query: 400 GDEGAEKIADALKQNR 415
           G E    I   L +N+
Sbjct: 475 GQEAEYCINQILHRNQ 490



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 73/146 (50%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+S     D G   + + L  +    +++   N +  +G +A    L  N  L  L
Sbjct: 324 LTELDLSHNVISDRGARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDL 383

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           N+  N +GDEG + +C  L+ N  +  + ++S DL +  A   ++++  N+ L+ ++L++
Sbjct: 384 NIRLNRLGDEGGQAICKALLKNTTLCNINMASSDLGEPTAAIFSQVVMQNTTLKSVDLSS 443

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHL 309
           N +   G   + E + +N+TI  + L
Sbjct: 444 NRLGAEGGKQIQEGMEDNTTITHMDL 469



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 73/153 (47%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+  + N I+  G +A    L ++  L  LNL  N +   G + +   L  N  +  L +
Sbjct: 326 ELDLSHNVISDRGARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDLNI 385

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               L DEG +AI + L  N+ L  + + ++ +        ++ +++N+T++S+ L+ N 
Sbjct: 386 RLNRLGDEGGQAICKALLKNTTLCNINMASSDLGEPTAAIFSQVVMQNTTLKSVDLSSNR 445

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
            GA G   + +G+E N ++  + L     G E 
Sbjct: 446 LGAEGGKQIQEGMEDNTTITHMDLRLTDSGQEA 478



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 97/220 (44%), Gaps = 9/220 (4%)

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           +A+    +A+ +   K L    L+ + + D+    +   +  +  +T +DL  N I  +G
Sbjct: 279 TARDCLLLAQCVAATKGLKVFRLHRSKVDDDKVRVLISHILDHPGLTELDLSHNVISDRG 338

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A AI + L ++S +  L+L  N +   GA+A++  L  +  +  L +   ++G  G + +
Sbjct: 339 ARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDLNIRLNRLGDEGGQAI 398

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAK 549
              L  N T+  +++ ++ L      G    + F   +     +    L  N L  +G K
Sbjct: 399 CKALLKNTTLCNINMASSDL------GEPTAAIFSQVVMQNTTLKSVDLSSNRLGAEGGK 452

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 589
            + +  +  N  +T +DL   +   +  + I Q L  N++
Sbjct: 453 QIQEGME-DNTTITHMDLRLTDSGQEAEYCINQILHRNQE 491


>gi|119589074|gb|EAW68668.1| NACHT, leucine rich repeat and PYD containing 14, isoform CRA_c
           [Homo sapiens]
          Length = 1093

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 18/328 (5%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLYHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEVCSGCNGLSF----FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            LDL +N L+D      NG+      F     +L+ +     C+  L  A CL  +  ++
Sbjct: 904 HLDLGSNWLQD------NGVKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVIL 954

Query: 559 NEA-LTSIDLAFNEIRDDGAFAIAQALK 585
           N   L S+DL  N+++DDG   +  AL+
Sbjct: 955 NNPNLRSLDLGNNDLQDDGVKILCDALR 982



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 6/311 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGL 511
            +  ++L  N L
Sbjct: 1016 LIKMNLTQNTL 1026



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 60/258 (23%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L + +   E +S  + G+T AG +     L SN  L  L L
Sbjct: 791  LNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCL 850

Query: 226  SGNPIGDEGVKCLCDI-----------------------------LVDNAGVERLQLSSV 256
            + N +GD GVK + D                              L+ N  +  L L S 
Sbjct: 851  ADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSN 910

Query: 257  DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--- 312
             L+D G K + ++ ++ S  L+ LEL   ++  +    LA  +L N  +RSL L  N   
Sbjct: 911  WLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQ 970

Query: 313  ------------------------YGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                                    Y G  +L    L+  L  NK L +++L  N++G EG
Sbjct: 971  DDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEG 1030

Query: 347  IRALMSGLSSRKGKLAVL 364
            I  L   L S K KL VL
Sbjct: 1031 IVKLYKVLKSPKCKLQVL 1048


>gi|291234811|ref|XP_002737343.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 470

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 33/289 (11%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +  +L  N T  +   A N     G K    +L  N+ L+TL++S N +G EG + +C++
Sbjct: 68  MTTALVRNITVTDFILADNRFGTEGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEM 127

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKN--NSILRVLELNNNMIDYSGFTSLAEALL 299
           + DN  +  L +S   ++D  A+ I++LL++  ++ L+ L+L++N  +  G   LA A+ 
Sbjct: 128 VADNNSLTSLNISGTQIKDTDAQVISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIK 187

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
            N  +  ++L+ N+    GA ++ K L+ N  L ++ L  N + D               
Sbjct: 188 YNKWLEVINLSYNHIRRKGATSICKALKLNSVLTDVDLSWNGLAD--------------- 232

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
                          GA  ++E +K   +L  +N+  N     G   + D L +NRT+ T
Sbjct: 233 --------------PGAALISEVLKANTTLTSLNVAFNRFTIFGVTIVKDGLDENRTLKT 278

Query: 420 IDLGGNNIHSKGASAIARVL--KDNSVITSLDLAYNPIGADGAKALSEV 466
           + +GGN I    +  +  VL  +    +T LDL   P+  +    L E+
Sbjct: 279 LRIGGNMITHAASMTLLTVLETRPECSLTLLDLGDAPVTREFTDLLEEL 327



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 127/249 (51%), Gaps = 10/249 (4%)

Query: 270 LKNNSILRVLELNNNMID--YSGFTS-----LAEALLENSTIRSLHLNGNYGGALGANAL 322
           + ++S +R L+    +++  Y G TS     +  AL+ N T+    L  N  G  GA  +
Sbjct: 37  VPSSSFIRTLQNKEPVMNMRYCGLTSVDVKAMTTALVRNITVTDFILADNRFGTEGAKHI 96

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           +  L  N  L+ L +  N++G EG R ++  + +    L  L+I    I    A  +++ 
Sbjct: 97  SDMLTENVYLQTLDMSNNNLGSEGTR-IICEMVADNNSLTSLNISGTQIKDTDAQVISDL 155

Query: 383 IKNCKS--LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           +++  S  L  ++L  N   + G + +A A+K N+ +  I+L  N+I  KGA++I + LK
Sbjct: 156 LRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHIRRKGATSICKALK 215

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            NSV+T +DL++N +   GA  +SEVLK +  + +L + + +    G   V D L  N T
Sbjct: 216 LNSVLTDVDLSWNGLADPGAALISEVLKANTTLTSLNVAFNRFTIFGVTIVKDGLDENRT 275

Query: 501 ISILDLRAN 509
           +  L +  N
Sbjct: 276 LKTLRIGGN 284



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 8/257 (3%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+SVD+     KA+   L  N  +    L +N     G   +++ L EN  +++L ++ N
Sbjct: 60  LTSVDV-----KAMTTALVRNITVTDFILADNRFGTEGAKHISDMLTENVYLQTLDMSNN 114

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR-KGKLAVLDIGNNSI 371
             G+ G   + + +  N SL  L++ G  I D   + +   L      +L  LD+ +N  
Sbjct: 115 NLGSEGTRIICEMVADNNSLTSLNISGTQIKDTDAQVISDLLRDPLSARLKKLDLSHNHF 174

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              G  H+A  IK  K L  INL  N I  +GA  I  ALK N  +T +DL  N +   G
Sbjct: 175 EEPGGKHLALAIKYNKWLEVINLSYNHIRRKGATSICKALKLNSVLTDVDLSWNGLADPG 234

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A+ I+ VLK N+ +TSL++A+N     G   + + L  +  + TL++G   I  + +  +
Sbjct: 235 AALISEVLKANTTLTSLNVAFNRFTIFGVTIVKDGLDENRTLKTLRIGGNMITHAASMTL 294

Query: 492 ADML--RYNNTISILDL 506
             +L  R   ++++LDL
Sbjct: 295 LTVLETRPECSLTLLDL 311



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 37/221 (16%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N  G EGA+ I+D L +N  + T+D+  NN+ S+G   I  ++ DN+ +TSL+++   I 
Sbjct: 86  NRFGTEGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEMVADNNSLTSLNISGTQIK 145

Query: 457 ADGAKALSEVLK--FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
              A+ +S++L+      +  L L        G + +A  ++YN  + +++L  N +R  
Sbjct: 146 DTDAQVISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHIRR- 204

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                          +GA  + ++ K+ N  LT +DL++N + D
Sbjct: 205 -------------------------------KGATSICKALKL-NSVLTDVDLSWNGLAD 232

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
            GA  I++ LKAN    +TSLN+A N  T FG + + D  D
Sbjct: 233 PGAALISEVLKAN--TTLTSLNVAFNRFTIFGVTIVKDGLD 271



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 3/227 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + +++   E     ++DMS  N G EG   + E +  N +   ++ +   I     +
Sbjct: 91  EGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEMVADNNSLTSLNISGTQIKDTDAQ 150

Query: 209 AFDGVLQSNIA--LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
               +L+  ++  LK L+LS N   + G K L   +  N  +E + LS   +R +GA +I
Sbjct: 151 VISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHIRRKGATSI 210

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            + LK NS+L  ++L+ N +   G   ++E L  N+T+ SL++  N     G   +  GL
Sbjct: 211 CKALKLNSVLTDVDLSWNGLADPGAALISEVLKANTTLTSLNVAFNRFTIFGVTIVKDGL 270

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSR-KGKLAVLDIGNNSIS 372
           + N++L+ L + GN I       L++ L +R +  L +LD+G+  ++
Sbjct: 271 DENRTLKTLRIGGNMITHAASMTLLTVLETRPECSLTLLDLGDAPVT 317



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++   FG EG   +++ L  N   + +  + N + + G +    ++  N +L +LN+SG 
Sbjct: 83  LADNRFGTEGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEMVADNNSLTSLNISGT 142

Query: 229 PIGDEGVKCLCDILVD--NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            I D   + + D+L D  +A +++L LS     + G K +A  +K N  L V+ L+ N I
Sbjct: 143 QIKDTDAQVISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHI 202

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G TS+ +AL  NS +  + L+ N     GA  +++ L+ N +L  L++  N     G
Sbjct: 203 RRKGATSICKALKLNSVLTDVDLSWNGLADPGAALISEVLKANTTLTSLNVAFNRFTIFG 262

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGA---FHVAEYIKNCKSLLWINLYMNDIGD 401
           +  +  GL   +  L  L IG N I+   +     V E    C      +L + D+GD
Sbjct: 263 VTIVKDGLDENR-TLKTLRIGGNMITHAASMTLLTVLETRPEC------SLTLLDLGD 313



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 37/240 (15%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + +N    +GA H+++ +     L  +++  N++G EG   I + +  N ++T++++ G 
Sbjct: 83  LADNRFGTEGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEMVADNNSLTSLNISGT 142

Query: 426 NIHSKGASAIARVLKD--NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            I    A  I+ +L+D  ++ +  LDL++N     G K L+  +K++  +  + L +  I
Sbjct: 143 QIKDTDAQVISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHI 202

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
              GA  +   L+ N+ ++ +DL  NGL D                              
Sbjct: 203 RRKGATSICKALKLNSVLTDVDLSWNGLAD------------------------------ 232

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
              GA  +++  K  N  LTS+++AFN     G   +   L  +E+  + +L +  N +T
Sbjct: 233 --PGAALISEVLKA-NTTLTSLNVAFNRFTIFGVTIVKDGL--DENRTLKTLRIGGNMIT 287


>gi|164562265|gb|ABY61044.1| nucleotide-binding oligomerization domain containing 2 [Sus scrofa]
          Length = 1013

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 138/272 (50%), Gaps = 4/272 (1%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V    V  L+L+   +      A+A +L++      L+L++N +   G   L   L   +
Sbjct: 732 VSRLNVGHLKLTFCSVGPAECAALAFVLRHLQWPVALQLDHNSVGDIGVEQLLPCL---N 788

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 789 VCKALYLRDNNISDRGFCKLVEHALCCEQLQKLALFNNKLTDGRAHSMARLLACKRNFLA 848

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +GNN  +A GA  +A+ ++   SL ++  + N +GD+GA+ +A+AL+ N+++  + L
Sbjct: 849 -LRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSL 907

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GNNI S GA A+A +L+ N  +  L L  N +  +G  +L+  L+ + ++  LKL    
Sbjct: 908 VGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNH 967

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           + + GAE +   L  N+TI  + LR N    E
Sbjct: 968 VTSRGAEALLQALEQNDTILEVWLRGNNFSPE 999



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 6/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +++F + G       AF  VL+       L L  N +GD GV+ L   L  N   + L L
Sbjct: 741  KLTFCSVGPAECAALAF--VLRHLQWPVALQLDHNSVGDIGVEQLLPCL--NV-CKALYL 795

Query: 254  SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               ++ D G   + E       L+ L L NN +      S+A  L       +L L  N+
Sbjct: 796  RDNNISDRGFCKLVEHALCCEQLQKLALFNNKLTDGRAHSMARLLACKRNFLALRLGNNH 855

Query: 314  GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              A+GA  LA+GL  N SL+ L   GN +GD+G +AL   L   +  L  L +  N+I +
Sbjct: 856  FTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQS-LKWLSLVGNNIGS 914

Query: 374  KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             GA  +A  ++   +L  + L  N + DEG   +A  L++N ++  + L  N++ S+GA 
Sbjct: 915  VGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAE 974

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            A+ + L+ N  I  + L  N    +  + LS+
Sbjct: 975  ALLQALEQNDTILEVWLRGNNFSPEETEQLSQ 1006



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 81/151 (53%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R F ++ +   +F   G   LA+ L  N + + + F  N +   G +A    L+ N +LK
Sbjct: 844 RNFLALRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLK 903

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L GN IG  G + L  +L  N  +E L L    ++DEG  ++A  L+ NS L+VL+L
Sbjct: 904 WLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKL 963

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +NN +   G  +L +AL +N TI  + L GN
Sbjct: 964 SNNHVTSRGAEALLQALEQNDTILEVWLRGN 994



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G   L E     +  ++++   N +T     +   +L        L L  N    
Sbjct: 799 NISDRGFCKLVEHALCCEQLQKLALFNNKLTDGRAHSMARLLACKRNFLALRLGNNHFTA 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L   L  N  ++ L      + D+GA+A+AE L++N  L+ L L  N I   G  
Sbjct: 859 VGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQ 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GLE N SL+ L L  N +   G  AL+ 
Sbjct: 919 ALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQ 978

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GNN
Sbjct: 979 ALEQNDTILEVWLRGNN 995



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G ++  +  Q L E  ++ ++   + + G N G  G   LA  L  N   EE+    
Sbjct: 878  GFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEE 937

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N +   G+ +    L+ N +LK L LS N +   G + L   L  N  +  + L   +  
Sbjct: 938  NHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQALEQNDTILEVWLRGNNFS 997

Query: 260  DEGAKAIAE 268
             E  + +++
Sbjct: 998  PEETEQLSQ 1006


>gi|399498102|emb|CCG20379.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 206/491 (41%), Gaps = 66/491 (13%)

Query: 34  PLSFAL-PFSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFV 92
           P S  L P S   R   ++R+    ++     R+ R + ++  + NA     V    +F 
Sbjct: 12  PFSIKLWPPSENTRKMLVERMTNNLSSPTIFTRKYRSLSKEEAAKNAEEIEDV----AFT 67

Query: 93  V--------PAGVFVSATFVLWKLVEKLL------MPKPSRPS------KPTAEGMNWSV 132
           +        P G   SA  +  +   KL+      MPKP           PT +   + +
Sbjct: 68  IANQHYEKEPDGDGSSAVQLYARECSKLILEILKKMPKPEDKEISISEVVPTVQETFFDI 127

Query: 133 GAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQT 191
             G      F G    E+++ L    +   ++S +  S R+FG +        L      
Sbjct: 128 SKGKR---AFIGA--EEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQ 182

Query: 192 AEEVS---FAANGITAAGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
            +EV    F A    A  + A   F   L+ +  LK LNLS N +G++GV+     L   
Sbjct: 183 LKEVDLSDFVAGRHEAEALDAMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQ 241

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE-----ALLE 300
             +E L L +  +  E A A++EL+ +   L+VL  +NNM    G  ++AE      LLE
Sbjct: 242 TNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLE 301

Query: 301 N-----------------------STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +                       S ++ L L  N  G      L K L  +++L E++L
Sbjct: 302 DFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYL 361

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              ++ DEG  A+ + L      LAVL++  N I+A+ A  +A  I   + L  ++L  N
Sbjct: 362 SYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGEN 421

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           ++ DEGA +IA AL+ +  +  +D+  N +   GA  +A+ +        L++  N I  
Sbjct: 422 ELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISE 481

Query: 458 DGAKALSEVLK 468
           +G   L E+ K
Sbjct: 482 EGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489


>gi|398024794|ref|XP_003865558.1| hypothetical protein, conserved [Leishmania donovani]
 gi|322503795|emb|CBZ38881.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 1123

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 112/522 (21%), Positives = 198/522 (37%), Gaps = 145/522 (27%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            L ++  + R    +++S    G+ G   L ++L  NQ  + +  + N + A  + A   V
Sbjct: 553  LADYLADNRTMLELNLSSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLV 612

Query: 214  LQSNIALKTLNLSGNPIGDE---GVKCLCDILVDNAGVERL--------------QLSSV 256
            L+ N AL+   L    +  E    VK  C +  + A V+R+              +LSS 
Sbjct: 613  LRENTALREFKLERTRVASEFVEQVKMACSLNRERAAVKRIYYRLHDGDASLTKIELSSP 672

Query: 257  D----LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS---------- 302
            D    + D+    I  +L+NN+ + V++L+ N+I  +G ++LA  L E +          
Sbjct: 673  DEERVIDDQTVSTICTVLRNNTSVEVIDLSGNVIGKNGCSALAATLSECTSKVRKIILSK 732

Query: 303  -------------------TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
                               T+R + L       +G  ALAKGLE N S+  + +  +   
Sbjct: 733  NPIDDDAAAELAACFPKIKTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTA 792

Query: 344  DEGIRALMSGLSSRKGKLAV---------------------------------------- 363
            DE +  LM  L+   G  A+                                        
Sbjct: 793  DENVSLLMRNLALNNGPAALKRITLSIDAGVIVDDVDLSRPVDCSMDDSLCKFLCASLVR 852

Query: 364  ------LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
                  L++ +N IS+    ++ E ++ C SL  ++L  N I + GA++I   L++   +
Sbjct: 853  CPTLRSLNLAHNEISSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSNL 912

Query: 418  TTIDLGGN--------------------------------------NIHSKGAS------ 433
             +++  GN                                      +I   G +      
Sbjct: 913  RSVNFAGNLFSAESLERVSQLVALNMGSEVLKKLYLTTTRGDQLPNDIDLNGTTNSYRLT 972

Query: 434  -----AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
                  +A +L+++S + SLDL  N  G +G  A++EVL+F+  I  L L    IG+ G 
Sbjct: 973  DEEVVVLAGLLQNSSTVKSLDLGSNSFGDEGCIAIAEVLRFNHTIEALNLAGNAIGSKGG 1032

Query: 489  EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY 530
            E +   L+ N  +  LDL    +  +V    + L   +   Y
Sbjct: 1033 EALYFALKINPQLQHLDLEKTAIPRDVLESISSLLHVNQTPY 1074



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 43/343 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL-KTLNL 225
           +++S     D GL  LAE+L  N + + +  A   ITA GI+    VLQ  I L + +N+
Sbjct: 377 LNISNSLIDDAGLELLAEALQKNTSLKVIELANCRITATGIQKLFAVLQKGICLVQEVNI 436

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQ-----------------LSSVDLRDEGAKAIAE 268
           + N + +  V+ +   L  N  ++ L                  L+ V+      +++  
Sbjct: 437 ANNNLDEGSVQYITAALRANPRLKTLNINVNPAISPASMQEIAGLTMVNRAPPQIRSVLP 496

Query: 269 LLKNNSI-LRVLELNNN--MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           L++NNS  + VL+ +     +D      LA+AL  NST+R L+L+ N  G  GA+ LA  
Sbjct: 497 LIENNSKDVVVLDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADY 556

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  N+++ EL+L   +IG+ G + L   L++ +  L  LD+ NN + A     +   ++ 
Sbjct: 557 LADNRTMLELNLSSCTIGNRGAQNLCKALATNQA-LQSLDLSNNMMDADSLSALPLVLRE 615

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNR-----------------TITTIDLGGNN-- 426
             +L    L    +  E  E++  A   NR                 ++T I+L   +  
Sbjct: 616 NTALREFKLERTRVASEFVEQVKMACSLNRERAAVKRIYYRLHDGDASLTKIELSSPDEE 675

Query: 427 --IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             I  +  S I  VL++N+ +  +DL+ N IG +G  AL+  L
Sbjct: 676 RVIDDQTVSTICTVLRNNTSVEVIDLSGNVIGKNGCSALAATL 718



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 119/530 (22%), Positives = 210/530 (39%), Gaps = 88/530 (16%)

Query: 167  VDMSGR--NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
            +D SG+     D+ ++ LA++L  N T  +++ + N     G       L  N  +  LN
Sbjct: 508  LDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELN 567

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            LS   IG+ G + LC  L  N  ++ L LS+  +  +   A+  +L+ N+ LR  +L   
Sbjct: 568  LSSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKLERT 627

Query: 285  MI--DYSGFTSLAEAL-LENSTIRSLHLNGNYGGA------------------LGANALA 323
             +  ++     +A +L  E + ++ ++   + G A                     + + 
Sbjct: 628  RVASEFVEQVKMACSLNRERAAVKRIYYRLHDGDASLTKIELSSPDEERVIDDQTVSTIC 687

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
              L  N S+  + L GN IG  G  AL + LS    K+  + +  N I    A  +A   
Sbjct: 688  TVLRNNTSVEVIDLSGNVIGKNGCSALAATLSECTSKVRKIILSKNPIDDDAAAELAACF 747

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI-----DLGGNNIH--------SK 430
               K+L  + LY  +I   G E +A  L++N +I  I     D    N+         + 
Sbjct: 748  PKIKTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALNN 807

Query: 431  GASAIARVL---------------------KDNSV-------------ITSLDLAYNPIG 456
            G +A+ R+                       D+S+             + SL+LA+N I 
Sbjct: 808  GPAALKRITLSIDAGVIVDDVDLSRPVDCSMDDSLCKFLCASLVRCPTLRSLNLAHNEIS 867

Query: 457  ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            +     + EV++   ++ +L L   QI  SGA+ +   L   + +  ++   N    E  
Sbjct: 868  SAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSNLRSVNFAGNLFSAESL 927

Query: 517  SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL---AQSFKVVNEALT---------- 563
               + L   +     LK +   +   + L     L     S+++ +E +           
Sbjct: 928  ERVSQLVALNMGSEVLKKLYLTTTRGDQLPNDIDLNGTTNSYRLTDEEVVVLAGLLQNSS 987

Query: 564  ---SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               S+DL  N   D+G  AIA+ L+ N    + +LNLA N +   G  AL
Sbjct: 988  TVKSLDLGSNSFGDEGCIAIAEVLRFNH--TIEALNLAGNAIGSKGGEAL 1035



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 155/341 (45%), Gaps = 33/341 (9%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
            +T  EV      IT  G++A    L+ N ++  + ++ +   DE V  L   L  N G  
Sbjct: 751  KTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALNNGPA 810

Query: 250  RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
             L+  ++ + D G      ++ +  + R ++ +   +D S    L  +L+   T+RSL+L
Sbjct: 811  ALKRITLSI-DAGV-----IVDDVDLSRPVDCS---MDDSLCKFLCASLVRCPTLRSLNL 861

Query: 310  NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
              N   +     + + +E   SL  L L GN I + G + +++ L  R   L  ++   N
Sbjct: 862  AHNEISSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLE-RVSNLRSVNFAGN 920

Query: 370  SISAKGAFHVAEYIK-NCKSLLWINLYM---------NDIG-----------DEGAEKIA 408
              SA+    V++ +  N  S +   LY+         NDI            DE    +A
Sbjct: 921  LFSAESLERVSQLVALNMGSEVLKKLYLTTTRGDQLPNDIDLNGTTNSYRLTDEEVVVLA 980

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
              L+ + T+ ++DLG N+   +G  AIA VL+ N  I +L+LA N IG+ G +AL   LK
Sbjct: 981  GLLQNSSTVKSLDLGSNSFGDEGCIAIAEVLRFNHTIEALNLAGNAIGSKGGEALYFALK 1040

Query: 469  FHGNINTLKLGWCQIGASGAEFVADMLRYNNTI--SILDLR 507
             +  +  L L    I     E ++ +L  N T   +++D+R
Sbjct: 1041 INPQLQHLDLEKTAIPRDVLESISSLLHVNQTPYRAVIDMR 1081



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 141/304 (46%), Gaps = 16/304 (5%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           A+EV+   +      +      + ++  ++ LN+S + I D G++ L + L  N  ++ +
Sbjct: 346 AQEVNLQWDAPLPMCMNYLVDYIAASSVIQHLNISNSLIDDAGLELLAEALQKNTSLKVI 405

Query: 252 QLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           +L++  +   G  K  A L K   +++ + + NN +D      +  AL  N  +++L++N
Sbjct: 406 ELANCRITATGIQKLFAVLQKGICLVQEVNIANNNLDEGSVQYITAALRANPRLKTLNIN 465

Query: 311 GNYGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
            N   +  +     GL   N++  +            IR+++  + +    + VLD    
Sbjct: 466 VNPAISPASMQEIAGLTMVNRAPPQ------------IRSVLPLIENNSKDVVVLDFSGK 513

Query: 370 SISA--KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++      + +A+ ++   ++  +NL  N  GD GA  +AD L  NRT+  ++L    I
Sbjct: 514 GVTLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELNLSSCTI 573

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            ++GA  + + L  N  + SLDL+ N + AD   AL  VL+ +  +   KL   ++ +  
Sbjct: 574 GNRGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKLERTRVASEF 633

Query: 488 AEFV 491
            E V
Sbjct: 634 VEQV 637



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 92/435 (21%), Positives = 177/435 (40%), Gaps = 80/435 (18%)

Query: 141 GFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGL--------------------- 179
            F G  + E ++ L  F   +    SVD SG + G  G+                     
Sbjct: 191 SFAGMTYGELEKELLRFLLHMEGLQSVDFSGMDLGTAGMITVGTFVRDTQVSALSFCKCS 250

Query: 180 --------FFLAESLGYNQTAEEVSFAAN-GITAAGIK-----AFD-GVLQSNIALKTLN 224
                   FF A  L   +      F+ N G++   ++      FD     +N AL   +
Sbjct: 251 LTNDAVLNFFQAADLANQRYPNSFDFSWNIGLSNDLVRKLISTTFDQSHCITNFALTKTS 310

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA-----------------IA 267
           ++  P     V+  C++  +N  ++R   + V LR+  + A                 + 
Sbjct: 311 VT--PTYVRLVQKECELNQENPAIKR---AVVALRNNSSDAQEVNLQWDAPLPMCMNYLV 365

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           + +  +S+++ L ++N++ID +G   LAEAL +N++++ + L      A G   L   L+
Sbjct: 366 DYIAASSVIQHLNISNSLIDDAGLELLAEALQKNTSLKVIELANCRITATGIQKLFAVLQ 425

Query: 328 GNKSL-RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNSISAKGAFHVAEYI-- 383
               L +E+++  N++ +  ++ + + L +   +L  L+I  N +IS      +A     
Sbjct: 426 KGICLVQEVNIANNNLDEGSVQYITAALRANP-RLKTLNINVNPAISPASMQEIAGLTMV 484

Query: 384 ---------------KNCKSLLWINLYMNDI--GDEGAEKIADALKQNRTITTIDLGGNN 426
                           N K ++ ++     +   D+    +A AL+ N T+  ++L  N+
Sbjct: 485 NRAPPQIRSVLPLIENNSKDVVVLDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHNS 544

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
               GAS +A  L DN  +  L+L+   IG  GA+ L + L  +  + +L L    + A 
Sbjct: 545 FGDTGASYLADYLADNRTMLELNLSSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDAD 604

Query: 487 GAEFVADMLRYNNTI 501
               +  +LR N  +
Sbjct: 605 SLSALPLVLRENTAL 619



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 114/251 (45%), Gaps = 22/251 (8%)

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++ +YI     +  +N+  + I D G E +A+AL++N ++  I+L    I + G   +  
Sbjct: 363 YLVDYIAASSVIQHLNISNSLIDDAGLELLAEALQKNTSLKVIELANCRITATGIQKLFA 422

Query: 438 VLKDN-SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADML 495
           VL+    ++  +++A N +     + ++  L+ +  + TL +     I  +  + +A + 
Sbjct: 423 VLQKGICLVQEVNIANNNLDEGSVQYITAALRANPRLKTLNINVNPAISPASMQEIAGLT 482

Query: 496 RYNNTI----SILDLRANGLRDEVC---SGCNGLSFFHSAIYSLKHMLFYSLCINYLQ-- 546
             N       S+L L  N  +D V    SG  G++    +++ L   L  +  +  L   
Sbjct: 483 MVNRAPPQIRSVLPLIENNSKDVVVLDFSG-KGVTLDDDSVWLLAQALRLNSTVRQLNLS 541

Query: 547 -------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                  GA  LA  +   N  +  ++L+   I + GA  + +AL  N+  A+ SL+L+N
Sbjct: 542 HNSFGDTGASYLAD-YLADNRTMLELNLSSCTIGNRGAQNLCKALATNQ--ALQSLDLSN 598

Query: 600 NFLTKFGQSAL 610
           N +     SAL
Sbjct: 599 NMMDADSLSAL 609



 Score = 38.9 bits (89), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K +  +   G  + D  ++ L++ + +      ++D+ NNSI++ G  ++  Y+    S+
Sbjct: 61  KGVAHIKCAGLGLNDHQLQLLITAIENSPSHPEIIDVSNNSITSAGVVYLIRYLTT-ASV 119

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             ++L  N I ++GA       ++  ++  +D+ GN   +  AS
Sbjct: 120 EAVDLRNNQIDEDGALTFFPLFEKKTSVKLLDVRGNPCSAATAS 163


>gi|363737252|ref|XP_422803.3| PREDICTED: leucine-rich repeat-containing protein 34 [Gallus
           gallus]
          Length = 418

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 136/298 (45%), Gaps = 20/298 (6%)

Query: 188 YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK---TLNLSGN-------PIGDEGVKC 237
           Y QT + +S   N   A  ++  D     NI      TL ++GN        + DE V+ 
Sbjct: 11  YLQTCQNLSQPENHFVARVLQEADE--SDNIRQAKGITLKIAGNNRLVPVQRVTDEDVQV 68

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L  +L     V  L L    L D G + +A  L+ NS LR L L  N I  SG   +A A
Sbjct: 69  LASVLRTAVFVTGLDLRYNILTDVGVRHVATFLQENSTLRYLNLMFNDIGTSGAELIANA 128

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           L  N T+  L + GN  G  G    A  L+ N +L +L L    +G + + A+ S L+  
Sbjct: 129 LHSNETLLHLRMTGNKIGNKGGMYFASMLQVNCTLEKLDLGDCDLGTQCLIAIASVLTQN 188

Query: 358 KGKLAVLDIGNN-----SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
           K   AV  I  N     S   +   H+A  +KN  SL+ ++L  ++I   G +++ +AL 
Sbjct: 189 K---AVKAINLNRPLLYSQEEETTVHIALMLKNNSSLVELHLCKHEIRSLGVKRLCEALY 245

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           +N ++  +DL  N I       +  +LK N  +  LDL  N I  DGA  LSE L  +
Sbjct: 246 ENCSLRYLDLSCNKITRDDVKFLGELLKQNQTLEILDLNSNRIEDDGAIYLSEALALY 303



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 160/356 (44%), Gaps = 17/356 (4%)

Query: 125 AEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAE 184
           A+G+   +     L+     ++  E  Q L    +     + +D+      D G+  +A 
Sbjct: 42  AKGITLKIAGNNRLVP--VQRVTDEDVQVLASVLRTAVFVTGLDLRYNILTDVGVRHVAT 99

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
            L  N T   ++   N I  +G +     L SN  L  L ++GN IG++G      +L  
Sbjct: 100 FLQENSTLRYLNLMFNDIGTSGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQV 159

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLAEALLEN 301
           N  +E+L L   DL  +   AIA +L  N  ++ + LN  ++   +      +A  L  N
Sbjct: 160 NCTLEKLDLGDCDLGTQCLIAIASVLTQNKAVKAINLNRPLLYSQEEETTVHIALMLKNN 219

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S++  LHL  +   +LG   L + L  N SLR L L  N I  + ++  +  L  +   L
Sbjct: 220 SSLVELHLCKHEIRSLGVKRLCEALYENCSLRYLDLSCNKITRDDVK-FLGELLKQNQTL 278

Query: 362 AVLDIGNNSISAKGAFHVAE----YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
            +LD+ +N I   GA +++E    Y +  K+L  ++   N+I  +G   ++ ++K N  +
Sbjct: 279 EILDLNSNRIEDDGAIYLSEALALYNRTLKALSVVS---NNIRGKGLVALSQSMKINMEL 335

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV---LKFH 470
           + I + GNN     ++A + +++   +  +      P   DG   L+E+   LK H
Sbjct: 336 SYIYIWGNNFDEAVSTAFSELIQAGRLKPNCT-DVEPYEVDGHVHLAELSHGLKKH 390



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 16/286 (5%)

Query: 342 IGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           + DE ++ L S L  R       LD+  N ++  G  HVA +++   +L ++NL  NDIG
Sbjct: 61  VTDEDVQVLASVL--RTAVFVTGLDLRYNILTDVGVRHVATFLQENSTLRYLNLMFNDIG 118

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             GAE IA+AL  N T+  + + GN I +KG    A +L+ N  +  LDL    +G    
Sbjct: 119 TSGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQVNCTLEKLDLGDCDLGTQCL 178

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAE---FVADMLRYNNTISILDLRANGLRDEVCS 517
            A++ VL  +  +  + L    + +   E    +A ML+ N+++  L L  + +R     
Sbjct: 179 IAIASVLTQNKAVKAINLNRPLLYSQEEETTVHIALMLKNNSSLVELHLCKHEIRSL--- 235

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
              G+     A+Y    + +  L  N +     K L +  K  N+ L  +DL  N I DD
Sbjct: 236 ---GVKRLCEALYENCSLRYLDLSCNKITRDDVKFLGELLK-QNQTLEILDLNSNRIEDD 291

Query: 576 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 621
           GA  +++AL A  +  + +L++ +N +   G  AL+ +  +  E+S
Sbjct: 292 GAIYLSEAL-ALYNRTLKALSVVSNNIRGKGLVALSQSMKINMELS 336


>gi|156629700|gb|ABU89560.1| NOD-like receptor C [Danio rerio]
          Length = 843

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 11/287 (3%)

Query: 202 ITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLR 259
           +T    ++   VLQS+I  L+ L+LS N + D GVK L D L   +  ++ L+L   +L 
Sbjct: 369 LTVQCCESLSSVLQSSICVLRELDLSNNDLQDSGVKKLSDGLKSSDCKLDTLRLVMCNLT 428

Query: 260 DEGAKAIAELLKN-NSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGAL 317
            +  ++++  L++ N +LR L+L+NN +  SG   L++ L  ++  + +L L        
Sbjct: 429 VQCCESLSSALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSQHCKLNTLSLAMCNLTVQ 488

Query: 318 GANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
              +L+  L+  N  LREL L  N + D G++ L  GL S   KL  L +   +++A+  
Sbjct: 489 SCESLSSALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSSDCKLETLRLVMCNLTAQSC 548

Query: 377 FHVAEYIKN--CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
             ++  +++  C +L  ++L  ND+ D G +K++D L      + T+ L G  +  +G  
Sbjct: 549 KSLSSVLQSSIC-ALRELDLSNNDLQDSGVKKLSDGLMSPHCKLDTLRLSGCMVTEEGCG 607

Query: 434 AIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKL 478
            ++  L  N S +  LDL+YN  G  G K LS+ L+  H  ++TL L
Sbjct: 608 FLSSALTSNPSHLRELDLSYNHPGDSGVKLLSQQLEDPHYTLHTLNL 654



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 138/269 (51%), Gaps = 10/269 (3%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSL 307
           R  L   +L  +  ++++ +L+++  +LR L+L+NN +  SG   L++ L   +  + +L
Sbjct: 361 RALLQDCNLTVQCCESLSSVLQSSICVLRELDLSNNDLQDSGVKKLSDGLKSSDCKLDTL 420

Query: 308 HLNGNYGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
            L           +L+  L+  N  LREL L  N + D G++ L  GL S+  KL  L +
Sbjct: 421 RLVMCNLTVQCCESLSSALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSQHCKLNTLSL 480

Query: 367 GNNSISAKGAFHVAEYIK--NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLG 423
              +++ +    ++  ++  NC  L  ++L  ND+ D G +K++D LK +   + T+ L 
Sbjct: 481 AMCNLTVQSCESLSSALQSSNC-VLRELDLSNNDLQDSGVKKLSDGLKSSDCKLETLRLV 539

Query: 424 GNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWC 481
             N+ ++   +++ VL+ +   +  LDL+ N +   G K LS+ ++  H  ++TL+L  C
Sbjct: 540 MCNLTAQSCKSLSSVLQSSICALRELDLSNNDLQDSGVKKLSDGLMSPHCKLDTLRLSGC 599

Query: 482 QIGASGAEFVADMLRYNNT-ISILDLRAN 509
            +   G  F++  L  N + +  LDL  N
Sbjct: 600 MVTEEGCGFLSSALTSNPSHLRELDLSYN 628



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 13/273 (4%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI--GNNSISAKGAFHVAEYIKNCKSL 389
           LREL L  N + D G++ L  GL S   KL  L +   N ++    +   A    NC  L
Sbjct: 388 LRELDLSNNDLQDSGVKKLSDGLKSSDCKLDTLRLVMCNLTVQCCESLSSALQSSNC-VL 446

Query: 390 LWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITS 447
             ++L  ND+ D G +K++D LK Q+  + T+ L   N+  +   +++  L+  N V+  
Sbjct: 447 RELDLSNNDLQDSGVKKLSDGLKSQHCKLNTLSLAMCNLTVQSCESLSSALQSSNCVLRE 506

Query: 448 LDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYN-NTISILD 505
           LDL+ N +   G K LS+ LK     + TL+L  C + A   + ++ +L+ +   +  LD
Sbjct: 507 LDLSNNDLQDSGVKKLSDGLKSSDCKLETLRLVMCNLTAQSCKSLSSVLQSSICALRELD 566

Query: 506 LRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTS 564
           L  N L+D  V    +GL   H  + +L+     S C+   +G   L+ +       L  
Sbjct: 567 LSNNDLQDSGVKKLSDGLMSPHCKLDTLR----LSGCMVTEEGCGFLSSALTSNPSHLRE 622

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           +DL++N   D G   ++Q L+ +    + +LNL
Sbjct: 623 LDLSYNHPGDSGVKLLSQQLE-DPHYTLHTLNL 654



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 11/290 (3%)

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             + L EL  +  +  DEG R L+  +  R  + A+L   N ++    +         C 
Sbjct: 330 SEEPLDELDSNKFNTSDEGRRRLIPAV--RNCRRALLQDCNLTVQCCESLSSVLQSSIC- 386

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD-NSVI 445
            L  ++L  ND+ D G +K++D LK +   + T+ L   N+  +   +++  L+  N V+
Sbjct: 387 VLRELDLSNNDLQDSGVKKLSDGLKSSDCKLDTLRLVMCNLTVQCCESLSSALQSSNCVL 446

Query: 446 TSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTI-SI 503
             LDL+ N +   G K LS+ LK  H  +NTL L  C +     E ++  L+ +N +   
Sbjct: 447 RELDLSNNDLQDSGVKKLSDGLKSQHCKLNTLSLAMCNLTVQSCESLSSALQSSNCVLRE 506

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
           LDL  N L+D   SG   LS    +       L   +C    Q  K L+   +    AL 
Sbjct: 507 LDLSNNDLQD---SGVKKLSDGLKSSDCKLETLRLVMCNLTAQSCKSLSSVLQSSICALR 563

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +DL+ N+++D G   ++  L +     + +L L+   +T+ G   L+ A
Sbjct: 564 ELDLSNNDLQDSGVKKLSDGLMSPH-CKLDTLRLSGCMVTEEGCGFLSSA 612



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 64/310 (20%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQS-NIALKTLN 224
           +D+S  +  D G+  L++ L  +    + +      +T    ++    LQS N  L+ L+
Sbjct: 391 LDLSNNDLQDSGVKKLSDGLKSSDCKLDTLRLVMCNLTVQCCESLSSALQSSNCVLRELD 450

Query: 225 LSGNPIGDEGVK----------C--------LCDILVD------------NAGVERLQLS 254
           LS N + D GVK          C        +C++ V             N  +  L LS
Sbjct: 451 LSNNDLQDSGVKKLSDGLKSQHCKLNTLSLAMCNLTVQSCESLSSALQSSNCVLRELDLS 510

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           + DL+D G K +++ LK+                      ++  LE  T+R +  N    
Sbjct: 511 NNDLQDSGVKKLSDGLKS----------------------SDCKLE--TLRLVMCNLT-- 544

Query: 315 GALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            A    +L+  L+ +  +LREL L  N + D G++ L  GL S   KL  L +    ++ 
Sbjct: 545 -AQSCKSLSSVLQSSICALRELDLSNNDLQDSGVKKLSDGLMSPHCKLDTLRLSGCMVTE 603

Query: 374 KGA-FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDL--GGNNIHS 429
           +G  F  +    N   L  ++L  N  GD G + ++  L+  + T+ T++L  GG    +
Sbjct: 604 EGCGFLSSALTSNPSHLRELDLSYNHPGDSGVKLLSQQLEDPHYTLHTLNLDHGGEKRIT 663

Query: 430 KGASAIARVL 439
            G    AR L
Sbjct: 664 AGLHKYARFL 673


>gi|426219357|ref|XP_004003892.1| PREDICTED: leucine-rich repeat-containing protein 34 [Ovis aries]
          Length = 622

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 16/259 (6%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +S  GA++ A+ ++   +L+++NL  NDIG EG E IA AL +NRT+  + + 
Sbjct: 286 LDVRYNLLSDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMT 345

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  L L    +
Sbjct: 346 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNRTIKGLNLNRPIL 405

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
                E    +  ML+ N  +  L +  + +++  C    G+     A+Y  + + +  +
Sbjct: 406 YGEQEESTVHLGHMLKENQCLVELHMCKHDIKN--C----GMKQLCDALYLNRSLQYLDV 459

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN----EDVAVTS 594
             N +   G KCLA   K  N  L  IDL+FN + + GA  ++ AL ++    + ++V S
Sbjct: 460 SCNKITQDGMKCLADVLK-SNTTLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVS 518

Query: 595 LNLANNFLTKFGQSALTDA 613
            N+    L    QS  T+ 
Sbjct: 519 NNIEGKGLVALSQSMKTNP 537



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 7/305 (2%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           NIA  + +LSG  +  E    LC +L +N+ +  L +    L D GA   A+LL+    L
Sbjct: 252 NIAGNSRSLSGERVTGEDFWILCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQKQHNL 311

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I   G   +A+AL +N T++ L + GN     G    A  L+ N SL +L 
Sbjct: 312 IYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMTGNKIENKGGMFFAAMLQINSSLEKLD 371

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI----SAKGAFHVAEYIKNCKSLLWI 392
           L    +G + + A  + L+  +  +  L++ N  I      +   H+   +K  + L+ +
Sbjct: 372 LGDCDLGMQSVIAFATVLTQNR-TIKGLNL-NRPILYGEQEESTVHLGHMLKENQCLVEL 429

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  +DI + G +++ DAL  NR++  +D+  N I   G   +A VLK N+ +  +DL++
Sbjct: 430 HMCKHDIKNCGMKQLCDALYLNRSLQYLDVSCNKITQDGMKCLADVLKSNTTLEVIDLSF 489

Query: 453 NPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N +   GA  LS+ L  H   +  L +    I   G   ++  ++ N T+S + +  N  
Sbjct: 490 NRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYIWGNKF 549

Query: 512 RDEVC 516
            +  C
Sbjct: 550 DEATC 554



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 15/330 (4%)

Query: 152 QTLNEFAKELR----------AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           Q L E  KE+           A +S  +SG     E  + L   L  N     +    N 
Sbjct: 233 QILQEVDKEIEKGSVGITLNIAGNSRSLSGERVTGEDFWILCRVLKNNSYINGLDVRYNL 292

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           ++  G      +LQ    L  LNL  N IG EG + +   L  N  ++ L+++   + ++
Sbjct: 293 LSDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMTGNKIENK 352

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--YGGALGA 319
           G    A +L+ NS L  L+L +  +      + A  L +N TI+ L+LN    YG    +
Sbjct: 353 GGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNRTIKGLNLNRPILYGEQEES 412

Query: 320 NA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              L   L+ N+ L ELH+  + I + G++ L   L   +  L  LD+  N I+  G   
Sbjct: 413 TVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDALYLNR-SLQYLDVSCNKITQDGMKC 471

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIAR 437
           +A+ +K+  +L  I+L  N + + GA  ++DAL   NRT+  + +  NNI  KG  A+++
Sbjct: 472 LADVLKSNTTLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALSQ 531

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            +K N  ++ + +  N        A S+++
Sbjct: 532 SMKTNPTLSHIYIWGNKFDEATCVAYSDLI 561



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 3/246 (1%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   +A++L  N+T + +    N I   G   F  +LQ N +L+ L+L    +G 
Sbjct: 320 DIGPEGGELIAKALHKNRTLKHLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGM 379

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + V     +L  N  ++ L L+   L   ++E    +  +LK N  L  L +  + I   
Sbjct: 380 QSVIAFATVLTQNRTIKGLNLNRPILYGEQEESTVHLGHMLKENQCLVELHMCKHDIKNC 439

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   L +AL  N +++ L ++ N     G   LA  L+ N +L  + L  N + + G   
Sbjct: 440 GMKQLCDALYLNRSLQYLDVSCNKITQDGMKCLADVLKSNTTLEVIDLSFNRMENAGANY 499

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L   L+S    L  L + +N+I  KG   +++ +K   +L  I ++ N   +      +D
Sbjct: 500 LSDALASHNRTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYIWGNKFDEATCVAYSD 559

Query: 410 ALKQNR 415
            +   R
Sbjct: 560 LIHTGR 565



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 58/268 (21%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+  EK +  +  N    +  L G  +  +    + RVLK+NS I  LD+ YN +   GA
Sbjct: 239 DKEIEKGSVGITLNIAGNSRSLSGERVTGEDFWILCRVLKNNSYINGLDVRYNLLSDVGA 298

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE------ 514
              +++L+   N+  L L +  IG  G E +A  L  N T+  L +  N + ++      
Sbjct: 299 YYAAKLLQKQHNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMTGNKIENKGGMFFA 358

Query: 515 ------------VCSGCN--------------------GLSFFHSAIY--------SLKH 534
                           C+                    GL+     +Y         L H
Sbjct: 359 AMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNRTIKGLNLNRPILYGEQEESTVHLGH 418

Query: 535 MLFYSLCINYLQ---------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
           ML  + C+  L          G K L  +   +N +L  +D++ N+I  DG   +A  LK
Sbjct: 419 MLKENQCLVELHMCKHDIKNCGMKQLCDAL-YLNRSLQYLDVSCNKITQDGMKCLADVLK 477

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +N  + V  ++L+ N +   G + L+DA
Sbjct: 478 SNTTLEV--IDLSFNRMENAGANYLSDA 503



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 7/183 (3%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           ES   L    KE +    + M   +  + G+  L ++L  N++ + +  + N IT  G+K
Sbjct: 411 ESTVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDALYLNRSLQYLDVSCNKITQDGMK 470

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIA 267
               VL+SN  L+ ++LS N + + G   L D L   N  ++ L + S ++  +G  A++
Sbjct: 471 CLADVLKSNTTLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALS 530

Query: 268 ELLKNNSILRVLELNNNMID------YSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           + +K N  L  + +  N  D      YS          +N+ +    ++G+   A  +N 
Sbjct: 531 QSMKTNPTLSHIYIWGNKFDEATCVAYSDLIHTGRLKSDNTDVEPFVVDGHVYLAEVSNG 590

Query: 322 LAK 324
           L +
Sbjct: 591 LKR 593


>gi|399497842|emb|CCG20249.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 134/269 (49%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   +    
Sbjct: 224 NALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTKKLKVLHFHNNMTG 283

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  G    
Sbjct: 284 DEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVG 343

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+ A  +
Sbjct: 344 LVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAI 403

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  +A+ +
Sbjct: 404 ASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTV 463

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLK 468
                   L+++ N I  +G   L E+ K
Sbjct: 464 LHKEEFKLLNVSGNFISEEGVDELKEIFK 492



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+  +L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFPNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + K L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   E+  +  LN++ NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKL--LNVSGNFISEEGVDELKE 489



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +   +  + L++ GN I +EG+  L
Sbjct: 463 VLHKEEFKLLNVSGNFISEEGVDEL 487


>gi|332211652|ref|XP_003254928.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14
           [Nomascus leucogenys]
          Length = 1092

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 18/328 (5%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNILGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEVCSGCNGLSF----FHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV 558
            LDL +N L+D      NG+      F     +L+ +     C+  L  A CL  +  ++
Sbjct: 904 HLDLGSNWLQD------NGVKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVIL 954

Query: 559 NEA-LTSIDLAFNEIRDDGAFAIAQALK 585
           N   L S+DL  N+++DDG   +  AL+
Sbjct: 955 NNPNLRSLDLGNNDLQDDGVKILCDALR 982



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 6/311 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNILGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGL 511
            +  ++L  N L
Sbjct: 1016 LIKMNLTQNTL 1026



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 60/258 (23%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L + +   E +S  + G+T AG +     L SN  L  L L
Sbjct: 791  LNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNKRLTHLCL 850

Query: 226  SGNPIGDEGVKCLCDI-----------------------------LVDNAGVERLQLSSV 256
            + N +GD GVK + D                              L+ N  +  L L S 
Sbjct: 851  ADNILGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSN 910

Query: 257  DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--- 312
             L+D G K + ++ ++ S  L+ LEL   ++  +    LA  +L N  +RSL L  N   
Sbjct: 911  WLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQ 970

Query: 313  ------------------------YGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                                    Y G  +L    L+  L  NK L +++L  N++G EG
Sbjct: 971  DDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEG 1030

Query: 347  IRALMSGLSSRKGKLAVL 364
            I  L   L S K KL VL
Sbjct: 1031 IVKLYKVLKSPKCKLQVL 1048


>gi|355756770|gb|EHH60378.1| hypothetical protein EGM_11726 [Macaca fascicularis]
          Length = 1044

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 768  VGHLKLTFCSVGPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 824

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 825  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 883

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE +++  SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 884  NNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 943

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G   L+E LK + ++  LKL    I   G
Sbjct: 944  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLG 1003

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1004 AEALLQALERNDTILEVWLRGN 1025



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 779  GPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 834

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 835  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARV 894

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+DN+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 895  LAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 954

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N L+DE VC    GL        SLK +   + CI YL GA+ L Q
Sbjct: 955  LAKNVMLEELCLEENHLQDEGVCCLAEGL----KRNSSLKILKLSNNCITYL-GAEALLQ 1009

Query: 554  SFK 556
            + +
Sbjct: 1010 ALE 1012



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 822  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 881

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L +N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 882  LGNNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 941

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 942  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCIT 1000

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 1001 YLGAEALLQALERNDTILEVWLRGNTF 1027



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 85/164 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 867  MAKLLACRQNFLALRLGNNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEA 926

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G   LAE L  N
Sbjct: 927  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRN 986

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E
Sbjct: 987  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLE 1030



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 126/278 (45%), Gaps = 8/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G       AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 765  GLNVGHLKLTFCSVGPAECAALAF--VLRHLRQPVALQLDYNSVGDIGVEQLLPCL---- 818

Query: 247  GVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            GV + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       
Sbjct: 819  GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 878

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +L L  N+  A GA  LA+GL  N SL+ L   GN +GDEG +AL   L   +  L  L 
Sbjct: 879  ALRLGNNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQS-LRWLS 937

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N
Sbjct: 938  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNN 997

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I   GA A+ + L+ N  I  + L  N    + A  L
Sbjct: 998  CITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 78/149 (52%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 877  FLALRLGNNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWL 936

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+DEG   +AE LK NS L++L+L+N
Sbjct: 937  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSN 996

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL  N TI  + L GN
Sbjct: 997  NCITYLGAEALLQALERNDTILEVWLRGN 1025



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 29/235 (12%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 830  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 889

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L DNA ++ L      + DEGA+A+AE                        
Sbjct: 890  AGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAE------------------------ 925

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                AL ++ ++R L L GN  G++GA ALA  L  N  L EL L  N + DEG+  L  
Sbjct: 926  ----ALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAE 981

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            GL  R   L +L + NN I+  GA  + + ++   ++L + L  N    E A+K+
Sbjct: 982  GL-KRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035


>gi|335290148|ref|XP_003127468.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Sus
            scrofa]
          Length = 1030

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 159/360 (44%), Gaps = 12/360 (3%)

Query: 158  AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSN 217
            AK  R  + + + G  +  +G     + + + Q     S   N +  A  +     L ++
Sbjct: 654  AKNCRNAAVLQLYGAAYNADG----EDGVRWPQMPLAQSPERNLLPDAYSEQLAAALSTS 709

Query: 218  IALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L  L L  N +G  GVK LC  L   N  ++ L+L    +     + +A  L  N  L
Sbjct: 710  PNLVELVLYSNALGSRGVKLLCQGLGHPNCNLQNLRLKRCQISSSACQDLALALIANKHL 769

Query: 277  RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
              ++L+ N +   G   L + L      ++ + L      A     +A  L  ++ L EL
Sbjct: 770  VRMDLSGNSLGLPGVKLLCKGLRHPKCRLQMVQLRKCQLEAGACQEIASVLSSSRHLEEL 829

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L GN++ D G+R L  GL     +L +L +    +SA     +A  +   +SL+ ++L 
Sbjct: 830  DLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICQLSAAACEDLAATLSGNQSLMELDLS 889

Query: 396  MNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            +N++GD G   + + L+  +  + T+ LG   + S     ++ VL+ N  +  LDL++N 
Sbjct: 890  LNELGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLQVNHHLQELDLSFND 949

Query: 455  IGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +G  G   L E L+ H      KL W   C + A   E ++ ML  N T++ L L  N L
Sbjct: 950  LGDCGMSLLCEGLR-HPTCRLQKL-WLDSCGLTAKACEDLSSMLGVNQTLTELYLTNNVL 1007



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 4/302 (1%)

Query: 174  FGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G+  L + LG+ N   + +      I+++  +     L +N  L  ++LSGN +G 
Sbjct: 722  LGSRGVKLLCQGLGHPNCNLQNLRLKRCQISSSACQDLALALIANKHLVRMDLSGNSLGL 781

Query: 233  EGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             GVK LC  L      ++ +QL    L     + IA +L ++  L  L+L  N ++ SG 
Sbjct: 782  PGVKLLCKGLRHPKCRLQMVQLRKCQLEAGACQEIASVLSSSRHLEELDLTGNALEDSGL 841

Query: 292  TSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +R L L      A     LA  L GN+SL EL L  N +GD G+  L
Sbjct: 842  RLLCQGLRHPVCRLRILWLKICQLSAAACEDLAATLSGNQSLMELDLSLNELGDPGVLLL 901

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GL   + KL  L +G   +S+     ++  ++    L  ++L  ND+GD G   + + 
Sbjct: 902  CEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLQVNHHLQELDLSFNDLGDCGMSLLCEG 961

Query: 411  LKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+     +  + L    + +K    ++ +L  N  +T L L  N +G  G + L + L  
Sbjct: 962  LRHPTCRLQKLWLDSCGLTAKACEDLSSMLGVNQTLTELYLTNNVLGNTGVRLLCKRLSH 1021

Query: 470  HG 471
             G
Sbjct: 1022 PG 1023



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 14/273 (5%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  + +L EL L+ N++G  G++ L  GL      L  L +    IS+     
Sbjct: 699 SEQLAAALSTSPNLVELVLYSNALGSRGVKLLCQGLGHPNCNLQNLRLKRCQISSSACQD 758

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   K L+ ++L  N +G  G + +   L+  +  +  + L    + +     IA 
Sbjct: 759 LALALIANKHLVRMDLSGNSLGLPGVKLLCKGLRHPKCRLQMVQLRKCQLEAGACQEIAS 818

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADM 494
           VL  +  +  LDL  N +   G + L + L+    +  L++ W   CQ+ A+  E +A  
Sbjct: 819 VLSSSRHLEELDLTGNALEDSGLRLLCQGLRH--PVCRLRILWLKICQLSAAACEDLAAT 876

Query: 495 LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
           L  N ++  LDL  N L D  V   C GL      + +L+      L I  L  A C   
Sbjct: 877 LSGNQSLMELDLSLNELGDPGVLLLCEGLRHPQCKLQTLR------LGICRLSSAACEGL 930

Query: 554 SFKV-VNEALTSIDLAFNEIRDDGAFAIAQALK 585
           S  + VN  L  +DL+FN++ D G   + + L+
Sbjct: 931 SAVLQVNHHLQELDLSFNDLGDCGMSLLCEGLR 963



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 3/259 (1%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGA 316
           L D  ++ +A  L  +  L  L L +N +   G   L + L   N  +++L L      +
Sbjct: 694 LPDAYSEQLAAALSTSPNLVELVLYSNALGSRGVKLLCQGLGHPNCNLQNLRLKRCQISS 753

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                LA  L  NK L  + L GNS+G  G++ L  GL   K +L ++ +    + A   
Sbjct: 754 SACQDLALALIANKHLVRMDLSGNSLGLPGVKLLCKGLRHPKCRLQMVQLRKCQLEAGAC 813

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
             +A  + + + L  ++L  N + D G   +   L+     +  + L    + +     +
Sbjct: 814 QEIASVLSSSRHLEELDLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICQLSAAACEDL 873

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
           A  L  N  +  LDL+ N +G  G   L E L+     + TL+LG C++ ++  E ++ +
Sbjct: 874 AATLSGNQSLMELDLSLNELGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAV 933

Query: 495 LRYNNTISILDLRANGLRD 513
           L+ N+ +  LDL  N L D
Sbjct: 934 LQVNHHLQELDLSFNDLGD 952



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 3/206 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
            R    +D++G    D GL  L + L +      + +     ++AA  +     L  N +L
Sbjct: 824  RHLEELDLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICQLSAAACEDLAATLSGNQSL 883

Query: 221  KTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+LS N +GD GV  LC+ L      ++ L+L    L     + ++ +L+ N  L+ L
Sbjct: 884  MELDLSLNELGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLQVNHHLQEL 943

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L+ N +   G + L E L   +  ++ L L+     A     L+  L  N++L EL+L 
Sbjct: 944  DLSFNDLGDCGMSLLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSMLGVNQTLTELYLT 1003

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVL 364
             N +G+ G+R L   LS    KL VL
Sbjct: 1004 NNVLGNTGVRLLCKRLSHPGCKLRVL 1029



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 29/262 (11%)

Query: 335 LHLHG---NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L L+G   N+ G++G+R     L+    +  + D  +  ++A         +    +L+ 
Sbjct: 663 LQLYGAAYNADGEDGVRWPQMPLAQSPERNLLPDAYSEQLAAA--------LSTSPNLVE 714

Query: 392 INLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           + LY N +G  G + +   L   N  +  + L    I S     +A  L  N  +  +DL
Sbjct: 715 LVLYSNALGSRGVKLLCQGLGHPNCNLQNLRLKRCQISSSACQDLALALIANKHLVRMDL 774

Query: 451 AYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           + N +G  G K L + L+     +  ++L  CQ+ A   + +A +L  +  +  LDL  N
Sbjct: 775 SGNSLGLPGVKLLCKGLRHPKCRLQMVQLRKCQLEAGACQEIASVLSSSRHLEELDLTGN 834

Query: 510 GLRDEVCSG----CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--LAQSFKVVNEALT 563
            L D   SG    C GL      +  L+ +L+  +C   L  A C  LA +    N++L 
Sbjct: 835 ALED---SGLRLLCQGL---RHPVCRLR-ILWLKIC--QLSAAACEDLAATLSG-NQSLM 884

Query: 564 SIDLAFNEIRDDGAFAIAQALK 585
            +DL+ NE+ D G   + + L+
Sbjct: 885 ELDLSLNELGDPGVLLLCEGLR 906


>gi|224586734|dbj|BAH24204.1| nucleotide-binding oligomerization domain containing 2 [Sus scrofa]
          Length = 1013

 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 138/272 (50%), Gaps = 4/272 (1%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V    V  L+L+   +      A+A +L++      L+L++N +   G   L   L   +
Sbjct: 732 VSRLNVGHLKLTFCSVGPAECAALAFVLRHLRWPVALQLDHNSVGDIGVEQLLPCL---N 788

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 789 VCKALYLRDNNISDRGFCKLVEHALRCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLA 848

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +GNN  +A GA  +A+ ++   SL ++  + N +GD+GA+ +A+AL+ N+++  + L
Sbjct: 849 -LRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSL 907

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GNNI S GA A+A +L+ N  +  L L  N +  +G  +L+  L+ + ++  LKL    
Sbjct: 908 VGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNH 967

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           + + GAE +   L  N+TI  + LR N    E
Sbjct: 968 VTSRGAEALLQALEQNDTILEVWLRGNNFSPE 999



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 130/273 (47%), Gaps = 8/273 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +++F + G       AF  VL+       L L  N +GD GV+ L   L  N   + L L
Sbjct: 741  KLTFCSVGPAECAALAF--VLRHLRWPVALQLDHNSVGDIGVEQLLPCL--NV-CKALYL 795

Query: 254  SSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
               ++ D G  K +   L+   + ++   NN + D     S+A  L       +L L  N
Sbjct: 796  RDNNISDRGFCKLVEHALRCEQLQKLALFNNKLTDGCAH-SMARLLACKRNFLALRLGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A+GA  LA+GL  N SL+ L   GN +GD+G +AL   L   +  L  L +  N+I 
Sbjct: 855  HFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQS-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++   +L  + L  N + DEG   +A  L++N ++  + L  N++ S+GA
Sbjct: 914  SVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             A+ + L+ N  I  + L  N    +  + LS+
Sbjct: 974  EALLQALEQNDTILEVWLRGNNFSPEETEQLSQ 1006



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 81/151 (53%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R F ++ +   +F   G   LA+ L  N + + + F  N +   G +A    L+ N +LK
Sbjct: 844 RNFLALRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLK 903

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L GN IG  G + L  +L  N  +E L L    ++DEG  ++A  L+ NS L+VL+L
Sbjct: 904 WLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKL 963

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +NN +   G  +L +AL +N TI  + L GN
Sbjct: 964 SNNHVTSRGAEALLQALEQNDTILEVWLRGN 994



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G   L E     +  ++++   N +T     +   +L        L L  N    
Sbjct: 799 NISDRGFCKLVEHALRCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLALRLGNNHFTA 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L   L  N  ++ L      + D+GA+A+AE L++N  L+ L L  N I   G  
Sbjct: 859 VGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQ 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GLE N SL+ L L  N +   G  AL+ 
Sbjct: 919 ALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQ 978

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GNN
Sbjct: 979 ALEQNDTILEVWLRGNN 995



 Score = 38.5 bits (88), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G ++  +  Q L E  ++ ++   + + G N G  G   LA  L  N   EE+    
Sbjct: 878  GFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEE 937

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N +   G+ +    L+ N +LK L LS N +   G + L   L  N  +  + L   +  
Sbjct: 938  NHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQALEQNDTILEVWLRGNNFS 997

Query: 260  DEGAKAIAE 268
             E  + +++
Sbjct: 998  PEETEQLSQ 1006


>gi|120577638|gb|AAI30224.1| Nlrc3 protein [Mus musculus]
          Length = 239

 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 1/186 (0%)

Query: 174 FGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           F D  +  L   L G +    ++S A N I   G KA    L  N +L TL+L  N IG 
Sbjct: 12  FQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGP 71

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G K L D L  N  +  L L S  ++D+G   +AE L +N  + +L+L  N+I   G  
Sbjct: 72  PGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQ 131

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +A+AL +N ++++L  + N  G  GA ALA+ L+ N+ L  L L  NSI D G+  LM 
Sbjct: 132 QMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMR 191

Query: 353 GLSSRK 358
            L S +
Sbjct: 192 ALCSNQ 197



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 93/178 (52%)

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ ++L 
Sbjct: 6   RLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLR 65

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+ +ADALK NRT+T++ L  N I   G   +A  L  N  I+ L L  N I
Sbjct: 66  SNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLI 125

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           G  GA+ +++ LK + ++  L      IG  GA  +A+ L+ N  +  LDL++N + D
Sbjct: 126 GLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISD 183



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 110/214 (51%), Gaps = 36/214 (16%)

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+C+ +  I+L  N IG++GA+ +A +L  NR++ T+DL  N+I   GA A+A  LK N 
Sbjct: 27  KDCR-IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINR 85

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +TSL L  N I  DG   ++E L  +  I+ L+L    IG  GA+ +AD L+ N     
Sbjct: 86  TLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQN----- 140

Query: 504 LDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALT 563
                                      SLK ++F S  I   +GA  LA++ KV N+ L 
Sbjct: 141 --------------------------RSLKALMFSSNTIGD-RGAIALAEALKV-NQILE 172

Query: 564 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           ++DL  N I D G   + +AL +N+   ++SLNL
Sbjct: 173 NLDLQSNSISDMGVTVLMRALCSNQ--TLSSLNL 204



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 1/175 (0%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +R++ L  N IG++G +AL   L   +  L  LD+ +NSI   GA  +A+ +K  ++L  
Sbjct: 31  IRKISLAENQIGNKGAKALARSLLVNRS-LITLDLRSNSIGPPGAKALADALKINRTLTS 89

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N I D+G   +A+AL  N+TI+ + L  N I   GA  +A  LK N  + +L  +
Sbjct: 90  LSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFS 149

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            N IG  GA AL+E LK +  +  L L    I   G   +   L  N T+S L+L
Sbjct: 150 SNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 204



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 87/171 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + ++    G++G   LA SL  N++   +   +N I   G KA    L+ N  L +L+L 
Sbjct: 34  ISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQ 93

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I D+GV C+ + LV N  +  LQL    +   GA+ +A+ LK N  L+ L  ++N I
Sbjct: 94  SNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTI 153

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
              G  +LAEAL  N  + +L L  N    +G   L + L  N++L  L+L
Sbjct: 154 GDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 204



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 75/148 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 57  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 117 MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 176

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHL 309
            +N I   G T L  AL  N T+ SL+L
Sbjct: 177 QSNSISDMGVTVLMRALCSNQTLSSLNL 204



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           I  + LA N IG  GAKAL+  L  + ++ TL L    IG  GA+ +AD L+ N T++ L
Sbjct: 31  IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 90

Query: 505 DLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY--LQGAKCLAQSFKVVNEAL 562
            L++N ++D+      G+     A+ S + +    L  N   L GA+ +A + K  N +L
Sbjct: 91  SLQSNVIKDD------GVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALK-QNRSL 143

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            ++  + N I D GA A+A+ALK N+   + +L+L +N ++  G + L  A
Sbjct: 144 KALMFSSNTIGDRGAIALAEALKVNQ--ILENLDLQSNSISDMGVTVLMRA 192



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 1/175 (0%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + ++ L+   + ++GAKA+A  L  N  L  L+L +N I   G  +LA+AL  N T+ SL
Sbjct: 31  IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 90

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N     G   +A+ L  N+++  L L  N IG  G + +   L   +  L  L   
Sbjct: 91  SLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRS-LKALMFS 149

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +N+I  +GA  +AE +K  + L  ++L  N I D G   +  AL  N+T+++++L
Sbjct: 150 SNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 204


>gi|291237672|ref|XP_002738757.1| PREDICTED: leucine rich repeat containing 45-like [Saccoglossus
           kowalevskii]
          Length = 453

 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 1/220 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +    N +  AG K    +L+ N  +  LNLS N +G +G + + D+L  N  ++R+ LS
Sbjct: 38  LDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINLS 97

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           + + +D+ A+   + LK+N  L+ L LNNN     G   L EA+  N T+  L L+ N+ 
Sbjct: 98  ANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDILDLSWNHL 157

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
              GA A++K +  N S+R L L  N   +EG  A+   L   K +L  LD+ NN I+  
Sbjct: 158 RNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALKVNK-QLIDLDLTNNRITND 216

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           GA  +A+ +++  +L  + +  N I   GA  I  A+ +N
Sbjct: 217 GALAIAKGLESNDTLKVLKIGKNPISAAGAMAILMAISKN 256



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D G  +   + K+N+++  L+L  N ++ +G   +A  L EN  I  L+L+ N  G+ GA
Sbjct: 19  DSGHLSTNSIEKSNTVVISLDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGA 78

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+   LE N +L+ ++L  N   D+        L S   +L  L + NN  S  G   +
Sbjct: 79  RAVGDMLEHNTTLQRINLSANEFKDKDAEPFTQALKSNY-RLKELILNNNDFSEIGGEFL 137

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I +  +L  ++L  N + + GA  I+ A+ +N +I  +DL  N   ++GA A+ + L
Sbjct: 138 GEAIASNDTLDILDLSWNHLRNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQAL 197

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K N  +  LDL  N I  DGA A+++ L+ +  +  LK+G   I A+GA  +   +  N 
Sbjct: 198 KVNKQLIDLDLTNNRITNDGALAIAKGLESNDTLKVLKIGKNPISAAGAMAILMAISKNP 257

Query: 500 TISILDLR 507
             ++ D+R
Sbjct: 258 QSALTDIR 265



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 140/265 (52%), Gaps = 4/265 (1%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D++G +    G   +A  L  N    E++ ++N + + G +A   +L+ N  L+ +NL
Sbjct: 37  SLDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINL 96

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N   D+  +     L  N  ++ L L++ D  + G + + E + +N  L +L+L+ N 
Sbjct: 97  SANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDILDLSWNH 156

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +   G  ++++A+ EN++IR L L+ N     GA A+ + L+ NK L +L L  N I ++
Sbjct: 157 LRNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALKVNKQLIDLDLTNNRITND 216

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLWINLYMND-IGDEG 403
           G  A+  GL S    L VL IG N ISA GA  +   I KN +S L  ++ + D I  E 
Sbjct: 217 GALAIAKGLES-NDTLKVLKIGKNPISAAGAMAILMAISKNPQSAL-TDIRLTDIIITEE 274

Query: 404 AEKIADALKQNRTITTIDLGGNNIH 428
            E++  A+++ R+   I+ GG   H
Sbjct: 275 FEEMLKAIQKTRSDLRIEHGGTARH 299



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 29/251 (11%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           + +SN  + +L+L+GN +   G KC+  +L +N  +  L LSS  L  +GA+A+ ++L++
Sbjct: 28  IEKSNTVVISLDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEH 87

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L+ + L+ N           +AL  N  ++ L LN N    +G   L + +  N + 
Sbjct: 88  NTTLQRINLSANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDT- 146

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
                                       L +LD+  N +  +GA  +++ +    S+  +
Sbjct: 147 ----------------------------LDILDLSWNHLRNRGAIAISKAMAENNSIRIL 178

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N   +EGA  +  ALK N+ +  +DL  N I + GA AIA+ L+ N  +  L +  
Sbjct: 179 DLSWNGFANEGALAMGQALKVNKQLIDLDLTNNRITNDGALAIAKGLESNDTLKVLKIGK 238

Query: 453 NPIGADGAKAL 463
           NPI A GA A+
Sbjct: 239 NPISAAGAMAI 249



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 113/263 (42%), Gaps = 47/263 (17%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +   G   +A  +K    +  +NL  N +G +GA  + D L+ N T+  I+L 
Sbjct: 38  LDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINLS 97

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N    K A    + LK N  +  L L  N     G + L E +  +  ++ L L W  +
Sbjct: 98  ANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDILDLSWNHL 157

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
              GA  ++  +  NN+I ILDL  NG  +E                             
Sbjct: 158 RNRGAIAISKAMAENNSIRILDLSWNGFANE----------------------------- 188

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
              GA  + Q+ K VN+ L  +DL  N I +DGA AIA+ L++N+ + V  L +  N ++
Sbjct: 189 ---GALAMGQALK-VNKQLIDLDLTNNRITNDGALAIAKGLESNDTLKV--LKIGKNPIS 242

Query: 604 KFG------------QSALTDAK 614
             G            QSALTD +
Sbjct: 243 AAGAMAILMAISKNPQSALTDIR 265



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 62/304 (20%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+ + SL L GN+    G   +A  L+ N  + EL+L  N +G +G RA           
Sbjct: 32  NTVVISLDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARA----------- 80

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
                             V + +++  +L  INL  N+  D+ AE    ALK N  +  +
Sbjct: 81  ------------------VGDMLEHNTTLQRINLSANEFKDKDAEPFTQALKSNYRLKEL 122

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N+    G   +   +  N  +  LDL++N +   GA A+S+ +  + +I  L L W
Sbjct: 123 ILNNNDFSEIGGEFLGEAIASNDTLDILDLSWNHLRNRGAIAISKAMAENNSIRILDLSW 182

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
                 GA  +   L+ N  +  LDL  N + ++                          
Sbjct: 183 NGFANEGALAMGQALKVNKQLIDLDLTNNRITND-------------------------- 216

Query: 541 CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
                 GA  +A+  +  N+ L  + +  N I   GA AI  A+  N   A+T + L + 
Sbjct: 217 ------GALAIAKGLE-SNDTLKVLKIGKNPISAAGAMAILMAISKNPQSALTDIRLTDI 269

Query: 601 FLTK 604
            +T+
Sbjct: 270 IITE 273



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 75/166 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +++S   F D+      ++L  N   +E+    N  +  G +     + SN  L  L
Sbjct: 91  LQRINLSANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDIL 150

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N + + G   +   + +N  +  L LS     +EGA A+ + LK N  L  L+L N
Sbjct: 151 DLSWNHLRNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALKVNKQLIDLDLTN 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           N I   G  ++A+ L  N T++ L +  N   A GA A+   +  N
Sbjct: 211 NRITNDGALAIAKGLESNDTLKVLKIGKNPISAAGAMAILMAISKN 256


>gi|343477062|emb|CCD12017.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 448

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 157/313 (50%), Gaps = 9/313 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           +KT++LS N +G    + +   L  +A V+ + L   D+  EG  A+++ +  +  LR+L
Sbjct: 68  VKTVHLSDNELGPTSSEKIISALSASA-VQEVLLCFNDIGREGCDALSDAVNISVNLRLL 126

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++  N ++      L +A+  + T+  L L  N  G  GA  + + LE N  L  L L  
Sbjct: 127 DIRGNGLNAKCVNKLLKAVSSSMTLVRLGLASNKLGEEGAMLVFRALEKNTFLTSLDLSL 186

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IG  G +++   L      L  + +  N +   G   +A  ++  +SL  + L  N+ 
Sbjct: 187 NEIGPGGAKSIAKLLEIPDSALKCVQLYGNYLGPSGVAVIALAVRRNRSLKQLTLGNNNA 246

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNPIGAD 458
            DE A ++A+ L +N T+  +DL  N I + G   +A+  L  N  + SL LA NPIG+ 
Sbjct: 247 TDEAAVQLAEMLSENSTLERLDLRLNVITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSV 306

Query: 459 GAKALSE--VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           G + +S+  +L     ++ L L  CQ+G +G   VA+++  ++TI+ ++L  N L DE  
Sbjct: 307 GGEEISQSLILSQVTALSVLDLSSCQLGPTGGMRVANLIATSSTITDVNLSDNKLDDEAS 366

Query: 517 -----SGCNGLSF 524
                S  NGLS 
Sbjct: 367 VSIANSIINGLSI 379



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 3/311 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+ G     + +  L +++  + T   +  A+N +   G       L+ N  L +L+LS
Sbjct: 126 LDIRGNGLNAKCVNKLLKAVSSSMTLVRLGLASNKLGEEGAMLVFRALEKNTFLTSLDLS 185

Query: 227 GNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N IG  G K +  +L + ++ ++ +QL    L   G   IA  ++ N  L+ L L NN 
Sbjct: 186 LNEIGPGGAKSIAKLLEIPDSALKCVQLYGNYLGPSGVAVIALAVRRNRSLKQLTLGNNN 245

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK-GLEGNKSLRELHLHGNSIGD 344
                   LAE L ENST+  L L  N   A+G   LA+ GL  N SL  L L GN IG 
Sbjct: 246 ATDEAAVQLAEMLSENSTLERLDLRLNVITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGS 305

Query: 345 EGIRALMSGLS-SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            G   +   L  S+   L+VLD+ +  +   G   VA  I    ++  +NL  N + DE 
Sbjct: 306 VGGEEISQSLILSQVTALSVLDLSSCQLGPTGGMRVANLIATSSTITDVNLSDNKLDDEA 365

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           +  IA+++    +I+ ++L  N I    A  +   ++ N  + SL+L  N I     K +
Sbjct: 366 SVSIANSIINGLSISMLNLSRNEIGEWSACNLIEAIQRNYRMVSLNLHGNKINRTVQKKI 425

Query: 464 SEVLKFHGNIN 474
             +++   N N
Sbjct: 426 DSLIEDRLNDN 436



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 160/327 (48%), Gaps = 5/327 (1%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +EV    N I   G  A    +  ++ L+ L++ GN +  + V  L   +  +  + RL 
Sbjct: 96  QEVLLCFNDIGREGCDALSDAVNISVNLRLLDIRGNGLNAKCVNKLLKAVSSSMTLVRLG 155

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNG 311
           L+S  L +EGA  +   L+ N+ L  L+L+ N I   G  S+A+ L + +S ++ + L G
Sbjct: 156 LASNKLGEEGAMLVFRALEKNTFLTSLDLSLNEIGPGGAKSIAKLLEIPDSALKCVQLYG 215

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           NY G  G   +A  +  N+SL++L L  N+  DE    L   L S    L  LD+  N I
Sbjct: 216 NYLGPSGVAVIALAVRRNRSLKQLTLGNNNATDEAAVQLAEML-SENSTLERLDLRLNVI 274

Query: 372 SAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGAEKIADA--LKQNRTITTIDLGGNNIH 428
           +A G   +A E +    SLL ++L  N IG  G E+I+ +  L Q   ++ +DL    + 
Sbjct: 275 TAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSVGGEEISQSLILSQVTALSVLDLSSCQLG 334

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             G   +A ++  +S IT ++L+ N +  + + +++  +    +I+ L L   +IG   A
Sbjct: 335 PTGGMRVANLIATSSTITDVNLSDNKLDDEASVSIANSIINGLSISMLNLSRNEIGEWSA 394

Query: 489 EFVADMLRYNNTISILDLRANGLRDEV 515
             + + ++ N  +  L+L  N +   V
Sbjct: 395 CNLIEAIQRNYRMVSLNLHGNKINRTV 421



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 12/322 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   V +   + G EG   L++++  +     +    NG+ A  +      + S++ L  
Sbjct: 94  AVQEVLLCFNDIGREGCDALSDAVNISVNLRLLDIRGNGLNAKCVNKLLKAVSSSMTLVR 153

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLEL 281
           L L+ N +G+EG   +   L  N  +  L LS  ++   GAK+IA+LL+  +S L+ ++L
Sbjct: 154 LGLASNKLGEEGAMLVFRALEKNTFLTSLDLSLNEIGPGGAKSIAKLLEIPDSALKCVQL 213

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +  SG   +A A+  N +++ L L  N      A  LA+ L  N +L  L L  N 
Sbjct: 214 YGNYLGPSGVAVIALAVRRNRSLKQLTLGNNNATDEAAVQLAEMLSENSTLERLDLRLNV 273

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDI 399
           I   GIR L      + G L  L +  N I + G   +++   +    +L  ++L    +
Sbjct: 274 ITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSVGGEEISQSLILSQVTALSVLDLSSCQL 333

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G  G  ++A+ +  + TIT ++L  N +  + + +IA  + +   I+ L+L+ N IG   
Sbjct: 334 GPTGGMRVANLIATSSTITDVNLSDNKLDDEASVSIANSIINGLSISMLNLSRNEIGEWS 393

Query: 460 AKALSEV---------LKFHGN 472
           A  L E          L  HGN
Sbjct: 394 ACNLIEAIQRNYRMVSLNLHGN 415



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 149/294 (50%), Gaps = 13/294 (4%)

Query: 159 KELRAFSS------VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           K L+A SS      + ++    G+EG   +  +L  N     +  + N I   G K+   
Sbjct: 140 KLLKAVSSSMTLVRLGLASNKLGEEGAMLVFRALEKNTFLTSLDLSLNEIGPGGAKSIAK 199

Query: 213 VLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           +L+  + ALK + L GN +G  GV  +   +  N  +++L L + +  DE A  +AE+L 
Sbjct: 200 LLEIPDSALKCVQLYGNYLGPSGVAVIALAVRRNRSLKQLTLGNNNATDEAAVQLAEMLS 259

Query: 272 NNSILRVLELNNNMIDYSGFTSLA-EALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            NS L  L+L  N+I   G  +LA E L +N ++ SL L GN  G++G   +++ L  ++
Sbjct: 260 ENSTLERLDLRLNVITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSVGGEEISQSLILSQ 319

Query: 331 --SLRELHLHGNSIGDE-GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             +L  L L    +G   G+R  ++ L +    +  +++ +N +  + +  +A  I N  
Sbjct: 320 VTALSVLDLSSCQLGPTGGMR--VANLIATSSTITDVNLSDNKLDDEASVSIANSIINGL 377

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           S+  +NL  N+IG+  A  + +A+++N  + +++L GN I+      I  +++D
Sbjct: 378 SISMLNLSRNEIGEWSACNLIEAIQRNYRMVSLNLHGNKINRTVQKKIDSLIED 431



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 140/286 (48%), Gaps = 8/286 (2%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+G EG + ++ +HL  N +G      ++S LS+   +  +L    N I  +G   +++
Sbjct: 59  IAEG-EGGQLVKTVHLSDNELGPTSSEKIISALSASAVQEVLLCF--NDIGREGCDALSD 115

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +    +L  +++  N +  +   K+  A+  + T+  + L  N +  +GA  + R L+ 
Sbjct: 116 AVNISVNLRLLDIRGNGLNAKCVNKLLKAVSSSMTLVRLGLASNKLGEEGAMLVFRALEK 175

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNT 500
           N+ +TSLDL+ N IG  GAK+++++L+   + +  ++L    +G SG   +A  +R N +
Sbjct: 176 NTFLTSLDLSLNEIGPGGAKSIAKLLEIPDSALKCVQLYGNYLGPSGVAVIALAVRRNRS 235

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           +  L L  N   DE       +   +S +  L   L     +    G + LAQ     N 
Sbjct: 236 LKQLTLGNNNATDEAAVQLAEMLSENSTLERLDLRLNVITAV----GIRTLAQEGLGQNG 291

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           +L S+ LA N I   G   I+Q+L  ++  A++ L+L++  L   G
Sbjct: 292 SLLSLSLAGNPIGSVGGEEISQSLILSQVTALSVLDLSSCQLGPTG 337


>gi|166796047|ref|NP_001107749.1| nucleotide-binding oligomerization domain-containing protein 1 [Sus
           scrofa]
 gi|164562263|gb|ABY61043.1| nucleotide-binding oligomerization domain containing 1 [Sus scrofa]
          Length = 953

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARILDECKG-LKCLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN +S+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G   +A+
Sbjct: 803 CLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKGLAQ 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I  + L  N ++ E
Sbjct: 923 NTGIMEICLNGNLIKPE 939



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 1/177 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  +  L + NN I+  GA +VA  +  CK L  + L
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYK-IVTFLGLYNNQITDVGARYVARILDECKGLKCLKL 791

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +R+I  + + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 792 GKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNG 851

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           I  +G K L++ L+ + ++    L   ++    AE +A+ML+ N T+  L L  N +
Sbjct: 852 ISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GA+ +A +L     L+ L
Sbjct: 730 LTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARILDECKGLKCL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I                               G   LA+ ++ ++S+ E+ + G
Sbjct: 790 KLGKNKITSE----------------------------GGKCLARAVKNSRSIFEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG +A    L +    L  L +  N IS +G   +A+ ++   SL    L  N++
Sbjct: 822 NQIGDEGAKAFAEALRNHPS-LTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I ++G + +A  L++N+ I  + L  N I  + 
Sbjct: 881 DDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVFED 946



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + + +  + LG N I S+G   +AR +K++  I  + +  N IG +GAKA +E
Sbjct: 775 YVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DEV          
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITARGTARLADALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 NNTGIMEICLN 932



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 29/218 (13%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K + E L    I+  L L NN I   G   +A  L E   ++ L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARILDECKGLKCLKLG 792

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   LA+ ++ ++S+ E+ + GN IGDEG +A                     
Sbjct: 793 KNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAF-------------------- 832

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                    AE ++N  SL  ++L  N I  EG + +A AL+QN ++    L  N +  +
Sbjct: 833 ---------AEALRNHPSLTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDE 883

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            A ++A +LK N  +  L L  N I A G   L++ L+
Sbjct: 884 VAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQ 921



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 92/202 (45%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     LK L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARILDECKGLKCLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 KNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   LA+AL +N+++R   L  N      A +LA+ L+ N++L+ L L  N I   G
Sbjct: 853 STEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
              L   L +  G + +   GN
Sbjct: 913 TARLADALQNNTGIMEICLNGN 934



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 85/170 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 770 DVGARYVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K +A+ L+ N+ LR+  L  N +D     SLA
Sbjct: 830 KAFAEALRNHPSLTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA  L+ N  + E+ L+GN I  E
Sbjct: 890 EMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPE 939



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 77/153 (50%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +    + +       EG   LA ++  +++  EV    N I   G KAF   L+++ +
Sbjct: 782 ECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L+L+ N I  EG K L   L  NA +    L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITARGTARLADALQNNTGIMEICLNGN 934



 Score = 40.0 bits (92), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K L E L  +  +  L L   QI   GA +VA +L       
Sbjct: 728 SRLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KCLA++ K  + ++
Sbjct: 781 ----------DE-CKGLKCLKLGKNKITS--------------EGGKCLARAVKN-SRSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             + +  N+I D+GA A A+AL+ +   ++T+L+LA N ++  G   L  A
Sbjct: 815 FEVGMWGNQIGDEGAKAFAEALRNHP--SLTNLSLAFNGISTEGGKGLAQA 863


>gi|440899616|gb|ELR50892.1| hypothetical protein M91_02865, partial [Bos grunniens mutus]
          Length = 392

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 136/256 (53%), Gaps = 3/256 (1%)

Query: 161 LRAFSSVDMS--GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR  S+ ++S   R  G +G   LA +L  N   + +    NG+  AG +A  G L  + 
Sbjct: 76  LRQGSAPELSLRHRGLGPQGARALAHALTSNPCIKRLDLRDNGLCGAGAEALAGALSRSC 135

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           ++  ++LS N +G EG + +C  L  +  V+RLQL+   L ++ A+ +A+LL  ++ L+ 
Sbjct: 136 SICDVDLSENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAKLLLAHTGLKS 195

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N ++     +L  AL EN+ +  L+++ N+   LGA A+A+GLE N  LR L + 
Sbjct: 196 LDLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGLGAIAIARGLEANIFLRVLDIS 255

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N  GD G  A+   L +    L  L + NN ISA GA  +   ++  ++L  + +  N 
Sbjct: 256 YNGCGDSGASAVGEALKTNN-VLEELYMSNNRISAAGALSLGLGLRVNQTLRILAVSRNP 314

Query: 399 IGDEGAEKIADALKQN 414
           +  EG   +  +++ N
Sbjct: 315 MQSEGCSGVLKSVQAN 330



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 29/268 (10%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L  +GA+A+A  L +N  ++ L+L +N +  +G  +LA AL  + +I  + L+
Sbjct: 84  LSLRHRGLGPQGARALAHALTSNPCIKRLDLRDNGLCGAGAEALAGALSRSCSICDVDLS 143

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  GA GA A+   L  + +++ L L GN + ++  + L   L +  G           
Sbjct: 144 ENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAKLLLAHTG----------- 192

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                             L  ++L  N + D+  E +  AL +N  +  +++  N++   
Sbjct: 193 ------------------LKSLDLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGL 234

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIAR L+ N  +  LD++YN  G  GA A+ E LK +  +  L +   +I A+GA  
Sbjct: 235 GAIAIARGLEANIFLRVLDISYNGCGDSGASAVGEALKTNNVLEELYMSNNRISAAGALS 294

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSG 518
           +   LR N T+ IL +  N ++ E CSG
Sbjct: 295 LGLGLRVNQTLRILAVSRNPMQSEGCSG 322



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 128/270 (47%), Gaps = 8/270 (2%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           S  EL L    +G +G RAL   L+S    +  LD+ +N +   GA  +A  +    S+ 
Sbjct: 80  SAPELSLRHRGLGPQGARALAHALTSNP-CIKRLDLRDNGLCGAGAEALAGALSRSCSIC 138

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N +G EGA+ I  AL  +  +  + L GN +  + A  +A++L  ++ + SLDL
Sbjct: 139 DVDLSENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAKLLLAHTGLKSLDL 198

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           +YN +     + L   L  +  +  L + W  +   GA  +A  L  N  + +LD+  NG
Sbjct: 199 SYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGLGAIAIARGLEANIFLRVLDISYNG 258

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAF 569
             D      +G S    A+ +   +    +  N +  A  L+    + VN+ L  + ++ 
Sbjct: 259 CGD------SGASAVGEALKTNNVLEELYMSNNRISAAGALSLGLGLRVNQTLRILAVSR 312

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           N ++ +G   + ++++AN   A+  L+ ++
Sbjct: 313 NPMQSEGCSGVLKSVQANPQSALELLDFSD 342



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 9/216 (4%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L    +G +GA  +A AL  N  I  +DL  N +   GA A+A  L  +  I  +DL+
Sbjct: 84  LSLRHRGLGPQGARALAHALTSNPCIKRLDLRDNGLCGAGAEALAGALSRSCSICDVDLS 143

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +GA+GA+A+   L     +  L+L    +    A+ +A +L  +  +  LDL  N L
Sbjct: 144 ENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAKLLLAHTGLKSLDLSYNQL 203

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAFN 570
            D+             A+     ++  ++  N+L+G   +A +  +  N  L  +D+++N
Sbjct: 204 NDQAGE------TLGPALAENTGLMELNVSWNHLRGLGAIAIARGLEANIFLRVLDISYN 257

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
              D GA A+ +ALK N    +  L ++NN ++  G
Sbjct: 258 GCGDSGASAVGEALKTNN--VLEELYMSNNRISAAG 291



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 11/189 (5%)

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           +  +GA A+A  L  N  I  LDL  N +   GA+AL+  L    +I  + L   ++GA 
Sbjct: 91  LGPQGARALAHALTSNPCIKRLDLRDNGLCGAGAEALAGALSRSCSICDVDLSENRLGAE 150

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL- 545
           GA+ +   L  +  +  L L  NGL ++       L   H+ + SL       L  N L 
Sbjct: 151 GAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAKLLLAHTGLKSL------DLSYNQLN 204

Query: 546 -QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            Q  + L  +    N  L  +++++N +R  GA AIA+ L+AN  + +  L+++ N    
Sbjct: 205 DQAGETLGPAL-AENTGLMELNVSWNHLRGLGAIAIARGLEAN--IFLRVLDISYNGCGD 261

Query: 605 FGQSALTDA 613
            G SA+ +A
Sbjct: 262 SGASAVGEA 270



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 28/184 (15%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  ++ Q L +         S+D+S     D+    L  +L  N    E++ + N +   
Sbjct: 175 LEEQAAQCLAKLLLAHTGLKSLDLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGL 234

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G  A    L++NI L+ L++S N  G                            D GA A
Sbjct: 235 GAIAIARGLEANIFLRVLDISYNGCG----------------------------DSGASA 266

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + E LK N++L  L ++NN I  +G  SL   L  N T+R L ++ N   + G + + K 
Sbjct: 267 VGEALKTNNVLEELYMSNNRISAAGALSLGLGLRVNQTLRILAVSRNPMQSEGCSGVLKS 326

Query: 326 LEGN 329
           ++ N
Sbjct: 327 VQAN 330


>gi|399497998|emb|CCG20327.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   GI+AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++GIRA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGIRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|229595531|ref|XP_001016935.3| hypothetical protein TTHERM_01535640 [Tetrahymena thermophila]
 gi|225565936|gb|EAR96690.3| hypothetical protein TTHERM_01535640 [Tetrahymena thermophila
           SB210]
          Length = 710

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 199/450 (44%), Gaps = 58/450 (12%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKNN 273
           +N++  TLNLS N IGD+G+  L   L +   +    LQL    + D+G   +   L N 
Sbjct: 234 TNLSKLTLNLSDNQIGDQGISGLGFALANCTNLSNLTLQLYVNQIGDQGISGLGFALANC 293

Query: 274 SILR--VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA-KGLEG-- 328
           + L    L L  + I   G + L +AL   + I  L LN      LG N +  +G+ G  
Sbjct: 294 TNLSNLTLYLYPSQIGDQGASGLGQALANCTNISKLTLN------LGDNQIGDQGISGLG 347

Query: 329 -------NKSLRELHLHGNSIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKGAFHVA 380
                  N S   L+L+GN IGD+G   L   L++        L++G N I  +GA  + 
Sbjct: 348 FALANCTNLSNLTLYLYGNQIGDQGASGLGQALANCTNISNLTLNLGRNQIDDQGALGLG 407

Query: 381 EYIKNCKSLLWINLYM--NDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIA 436
             + +C +L  + L +  N IGDEGA  +   L    N +  T+ L GN I  +GAS + 
Sbjct: 408 SALADCTNLQNLTLILDGNQIGDEGASGLGSVLANCANLSNLTLYLSGNQIGDEGASGLG 467

Query: 437 RVLKDNSVITSLD--LAYNPIGADGAKALSEVLK--FHGNINTLKLGWCQIGASGAEFVA 492
            VL + + +++L   L+ N IG  GA  L   L    H +  TL L + QIG  GA  + 
Sbjct: 468 SVLANCANLSNLTLYLSQNQIGVIGAIGLGSALANYIHLSNLTLNLSYNQIGDQGASGLG 527

Query: 493 DMLRYNNTIS--ILDLRANGLRDEVCSG-------CNGLS--FFH--------------- 526
             L   N +S  ILDL  N +  +  SG       C  LS    H               
Sbjct: 528 SALANCNNLSNLILDLCDNQISGQGASGLGSGLVNCTNLSNLTLHLNRNQIDDQGALGLG 587

Query: 527 SAIYSLKHMLFYSLCINYLQGAKCLAQSF---KVVNEALTSIDLAFNEIRDDGAFAIAQA 583
           SA+ +  ++    LC++  Q     A SF      N +  ++DL +N+I + GA  +  A
Sbjct: 588 SALANCTNLSNLKLCLSANQIRDLGASSFGLASCTNISNLALDLRYNQIHEQGALGLGSA 647

Query: 584 LKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           L     +   SL+L+ N +   G   L  A
Sbjct: 648 LANCTHLQNLSLDLSGNQIDDQGALGLGSA 677



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 226/523 (43%), Gaps = 65/523 (12%)

Query: 147 FRESKQTLNE--FAKELRAFSSVDMSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGI 202
           F  S Q  N+  F + L+       S    GDEG   L  +L    N +   +    N I
Sbjct: 47  FFPSNQLFNDIFFLQYLK-------SNNQIGDEGASGLGSALANCINLSNLTLQLYENQI 99

Query: 203 TAAGIKAFDGVLQSNIALK--TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR- 259
              G       L + I L   TLNLS N IGDEG   L   L +   +  L L   +LR 
Sbjct: 100 GDEGASDLGSALANCINLSNLTLNLSYNQIGDEGASGLGSALANCINLSNLTL---NLRY 156

Query: 260 ----DEGAKAIAELLKNNSILRVLELN--NNMIDYSGFTSLAEALLENSTIRSLHLN-GN 312
               DEGA  +   L N   L  L LN  +  I   G + L  AL     + +L L+  N
Sbjct: 157 NQIGDEGASGLGSALANCINLSNLTLNLRDKKIGDEGASGLGSALANCINLSNLTLDLRN 216

Query: 313 YGGALGANALAKGLEGNKSLRE--LHLHGNSIGDEGIRAL------MSGLSSRKGKLAVL 364
                G + L   L    +L +  L+L  N IGD+GI  L       + LS+   +L V 
Sbjct: 217 QIDDQGTSELGSALANCTNLSKLTLNLSDNQIGDQGISGLGFALANCTNLSNLTLQLYVN 276

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTIT--TI 420
            IG+  IS  G F +A    NC +L  L + LY + IGD+GA  +  AL     I+  T+
Sbjct: 277 QIGDQGISGLG-FALA----NCTNLSNLTLYLYPSQIGDQGASGLGQALANCTNISKLTL 331

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAY--NPIGADGAKALSEVLKFHGNIN--TL 476
           +LG N I  +G S +   L + + +++L L    N IG  GA  L + L    NI+  TL
Sbjct: 332 NLGDNQIGDQGISGLGFALANCTNLSNLTLYLYGNQIGDQGASGLGQALANCTNISNLTL 391

Query: 477 KLGWCQIGASGA----EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSL 532
            LG  QI   GA      +AD     N   ILD   N + DE   G +GL    +   +L
Sbjct: 392 NLGRNQIDDQGALGLGSALADCTNLQNLTLILD--GNQIGDE---GASGLGSVLANCANL 446

Query: 533 KHMLFYSLCINYL--QGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 589
            ++  Y L  N +  +GA  L        N +  ++ L+ N+I   GA  +  AL     
Sbjct: 447 SNLTLY-LSGNQIGDEGASGLGSVLANCANLSNLTLYLSQNQIGVIGAIGLGSALANYIH 505

Query: 590 VAVTSLNLANNFLTKFGQSALTDA-------KDLVYEMSEKEV 625
           ++  +LNL+ N +   G S L  A        +L+ ++ + ++
Sbjct: 506 LSNLTLNLSYNQIGDQGASGLGSALANCNNLSNLILDLCDNQI 548



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 136/317 (42%), Gaps = 19/317 (5%)

Query: 169 MSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGITAAGIKAFDGVLQ--SNIALKTLN 224
           + G   GD+G   L ++L    N +   ++   N I   G       L   +N+   TL 
Sbjct: 363 LYGNQIGDQGASGLGQALANCTNISNLTLNLGRNQIDDQGALGLGSALADCTNLQNLTLI 422

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQL--SSVDLRDEGAKAIAELLKNNSILR--VLE 280
           L GN IGDEG   L  +L + A +  L L  S   + DEGA  +  +L N + L    L 
Sbjct: 423 LDGNQIGDEGASGLGSVLANCANLSNLTLYLSGNQIGDEGASGLGSVLANCANLSNLTLY 482

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG--GALGANALAKGLEGNKSLREL--H 336
           L+ N I   G   L  AL     + +L LN +Y   G  GA+ L   L    +L  L   
Sbjct: 483 LSQNQIGVIGAIGLGSALANYIHLSNLTLNLSYNQIGDQGASGLGSALANCNNLSNLILD 542

Query: 337 LHGNSIGDEGIRALMSGL--SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWI 392
           L  N I  +G   L SGL   +    L  L +  N I  +GA  +   + NC +L  L +
Sbjct: 543 LCDNQISGQGASGLGSGLVNCTNLSNL-TLHLNRNQIDDQGALGLGSALANCTNLSNLKL 601

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT--SLDL 450
            L  N I D GA     A   N +   +DL  N IH +GA  +   L + + +   SLDL
Sbjct: 602 CLSANQIRDLGASSFGLASCTNISNLALDLRYNQIHEQGALGLGSALANCTHLQNLSLDL 661

Query: 451 AYNPIGADGAKALSEVL 467
           + N I   GA  L   L
Sbjct: 662 SGNQIDDQGALGLGSAL 678



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 107/245 (43%), Gaps = 11/245 (4%)

Query: 169 MSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK--TLN 224
           +SG   GDEG   L   L    N +   +  + N I   G       L + I L   TLN
Sbjct: 453 LSGNQIGDEGASGLGSVLANCANLSNLTLYLSQNQIGVIGAIGLGSALANYIHLSNLTLN 512

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD--LRDEGAKAIAELLKNNSILR--VLE 280
           LS N IGD+G   L   L +   +  L L   D  +  +GA  +   L N + L    L 
Sbjct: 513 LSYNQIGDQGASGLGSALANCNNLSNLILDLCDNQISGQGASGLGSGLVNCTNLSNLTLH 572

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHL--NGNYGGALGANALAKGLEGNKSLRELHLH 338
           LN N ID  G   L  AL   + + +L L  + N    LGA++       N S   L L 
Sbjct: 573 LNRNQIDDQGALGLGSALANCTNLSNLKLCLSANQIRDLGASSFGLASCTNISNLALDLR 632

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            N I ++G   L S L++      + LD+  N I  +GA  +   + NC +LL + L+++
Sbjct: 633 YNQIHEQGALGLGSALANCTHLQNLSLDLSGNQIDDQGALGLGSALANCINLLNLTLHLS 692

Query: 398 DIGDE 402
            + D+
Sbjct: 693 CLTDK 697


>gi|297698721|ref|XP_002826462.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 2-like, partial [Pongo abelii]
          Length = 860

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 135/262 (51%), Gaps = 4/262 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 584 VGHLKLTFCSVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 640

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +L  N     G   L +     + L++L L  N + D    ++   L+SR+  LA L +G
Sbjct: 641 YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLASRQNFLA-LRLG 699

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 700 NNHITAVGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 759

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 760 GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 819

Query: 488 AEFVADMLRYNNTISILDLRAN 509
           AE +   L  N+TI  + LR N
Sbjct: 820 AEALLQALERNDTILEVWLRGN 841



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 10/237 (4%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +G   + 
Sbjct: 601 ALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDRGICKLI 656

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  +A  L+
Sbjct: 657 ECALHCEQLQKLALFNNKLTDGCAHSMAKLLASRQNFLALRLGNNHITAVGAQVLAEGLR 716

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A ML  N  
Sbjct: 717 GNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVM 776

Query: 501 ISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
           +  L L  N L+DE VCS   GL        SLK +   + CI YL GA+ L Q+ +
Sbjct: 777 LEELCLEENHLQDEGVCSLAEGL----KKNSSLKILKLSNNCITYL-GAEALLQALE 828



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL +      L 
Sbjct: 638 KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLASRQNFLALR 697

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN I   G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 698 LGNNHITAVGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 757

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 758 NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 816

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNI 427
             GAE +  AL++N TI  + L GN  
Sbjct: 817 YLGAEALLQALERNDTILEVWLRGNTF 843



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A+ L   Q    +    N ITA G +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 683 MAKLLASRQNFLALRLGNNHITAVGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 742

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 743 LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 802

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 803 SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 851



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 88/174 (50%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 668 LALFNNKLTDGCAHSMAKLLASRQNFLALRLGNNHITAVGAQVLAEGLRGNTSLQFLGFW 727

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 728 GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHL 787

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +DEG  ++AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 788 QDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 841



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 88/197 (44%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G+  L E   + +  ++++   N +T     +   +L S      L L  N I  
Sbjct: 646 NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLASRQNFLALRLGNNHITA 705

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 706 VGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 765

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 766 ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 825

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GN 
Sbjct: 826 ALERNDTILEVWLRGNT 842


>gi|4680192|gb|AAD27557.1|AF111710_3 hypothetical protein [Oryza sativa Indica Group]
          Length = 789

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 139/275 (50%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF+ +L+S   L+ L +  + I +E  + L +++     ++ L   
Sbjct: 220 LNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKILHFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA  IAE++K +  L     +   I   G  +LAEAL   + ++ L L  N  
Sbjct: 280 NNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L EL+L   ++ ++G  A+++ L     +L VL++  N I+AK
Sbjct: 340 GVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAK 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGAS 433
            +  +AE +   +SL  + L  N++ D+GA  IA +L+  ++ +  +D+  N +   GA 
Sbjct: 400 ASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQDLKELDVSTNMLQRVGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             A+ + +      L++  N I  +G   + ++LK
Sbjct: 460 CFAQAIANKPGFVQLNINGNFISDEGIDEVKDILK 494



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 39/294 (13%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K LEG   LR L++  N++G++G+RA    L S+   L  L + N+ IS + A  ++E
Sbjct: 208 FSKALEG-AVLRYLNISDNALGEKGVRAFEELLKSQDN-LEELYVMNDGISEEAAQALSE 265

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I + + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A+A  L  
Sbjct: 266 LIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGT 325

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
            + +  LDL  N  G +   ALS+ L    ++  L L    +   G   + + L+ +   
Sbjct: 326 CTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQ 385

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           + +L++  N +  +                                 A+CL        +
Sbjct: 386 LEVLEMAGNEINAKASQAL----------------------------AECL-----TAMQ 412

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALK-ANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +L  + LA NE++DDGA  IA++L+  ++D  +  L+++ N L + G      A
Sbjct: 413 SLKKLTLAENELKDDGAVVIAKSLEDGHQD--LKELDVSTNMLQRVGARCFAQA 464



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 102/246 (41%), Gaps = 30/246 (12%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ Q L+E          +       GDEG  F+AE +  +   E    +A  I + G  
Sbjct: 258 EAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGV 317

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L +   LK L+L  N  G E    L   L     +  L LS ++L ++G  AI  
Sbjct: 318 ALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIIN 377

Query: 269 LLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            LK ++  L VLE+  N I+     +LAE L    +++ L L  N     GA  +AK LE
Sbjct: 378 TLKQSAPQLEVLEMAGNEINAKASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSLE 437

Query: 328 -GNKSLREL----------------------------HLHGNSIGDEGIRALMSGLSSRK 358
            G++ L+EL                            +++GN I DEGI  +   L S +
Sbjct: 438 DGHQDLKELDVSTNMLQRVGARCFAQAIANKPGFVQLNINGNFISDEGIDEVKDILKSGE 497

Query: 359 GKLAVL 364
             + VL
Sbjct: 498 NSVEVL 503


>gi|320165381|gb|EFW42280.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 424

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           +G  ALA+ L+ N +L EL L    IG+ G RA+   L        +  +  N I + G 
Sbjct: 23  IGDQALAEALKVNTTLTELRLSYCQIGEAGARAIAEALRVTTTLTLLR-LNVNGIGSAGV 81

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             +AE +K  K++  +NL  N IGD GA+ IADALK N T+  + L  N I + GA AIA
Sbjct: 82  RTIAEALKVNKTVTVLNLSENQIGDIGAQVIADALKVNTTLKYLVLSANQIGAAGAHAIA 141

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            +LK N+ +  L L  N IG  GA+ ++E LK +  +  L L   QIG  GA+ +A+ ++
Sbjct: 142 ELLKVNTQMGWLSLHRNRIGDAGAQTIAEALKVNPPLTYLDLRENQIGDIGAQEIAEGIK 201

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
            N  +  LDL+ N      C G  GL  F  A
Sbjct: 202 VNTRLGFLDLQLN------CIGNAGLQAFDEA 227



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 113/207 (54%), Gaps = 1/207 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G +A+AE LK N+ L  L L+   I  +G  ++AEAL   +T+  L LN N  G+ G   
Sbjct: 24  GDQALAEALKVNTTLTELRLSYCQIGEAGARAIAEALRVTTTLTLLRLNVNGIGSAGVRT 83

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+ L+ NK++  L+L  N IGD G + +   L      L  L +  N I A GA  +AE
Sbjct: 84  IAEALKVNKTVTVLNLSENQIGDIGAQVIADALKVNT-TLKYLVLSANQIGAAGAHAIAE 142

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K    + W++L+ N IGD GA+ IA+ALK N  +T +DL  N I   GA  IA  +K 
Sbjct: 143 LLKVNTQMGWLSLHRNRIGDAGAQTIAEALKVNPPLTYLDLRENQIGDIGAQEIAEGIKV 202

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLK 468
           N+ +  LDL  N IG  G +A  E  K
Sbjct: 203 NTRLGFLDLQLNCIGNAGLQAFDEARK 229



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 6/238 (2%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A + L LS   IGD+    L + L  N  +  L+LS   + + GA+AIAE L+  + L +
Sbjct: 12  AKRELVLSQEQIGDQ---ALAEALKVNTTLTELRLSYCQIGEAGARAIAEALRVTTTLTL 68

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L LN N I  +G  ++AEAL  N T+  L+L+ N  G +GA  +A  L+ N +L+ L L 
Sbjct: 69  LRLNVNGIGSAGVRTIAEALKVNKTVTVLNLSENQIGDIGAQVIADALKVNTTLKYLVLS 128

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IG  G  A+   L     ++  L +  N I   GA  +AE +K    L +++L  N 
Sbjct: 129 ANQIGAAGAHAIAELLKVNT-QMGWLSLHRNRIGDAGAQTIAEALKVNPPLTYLDLRENQ 187

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS--LDLAYNP 454
           IGD GA++IA+ +K N  +  +DL  N I + G  A     KDN   T   +D   +P
Sbjct: 188 IGDIGAQEIAEGIKVNTRLGFLDLQLNCIGNAGLQAFDEARKDNRASTDVGIDRQVHP 245



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 110/216 (50%), Gaps = 3/216 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E  K     + + +S    G+ G   +AE+L    T   +    NGI +AG++   
Sbjct: 26  QALAEALKVNTTLTELRLSYCQIGEAGARAIAEALRVTTTLTLLRLNVNGIGSAGVRTIA 85

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  +  LNLS N IGD G + + D L  N  ++ L LS+  +   GA AIAELLK
Sbjct: 86  EALKVNKTVTVLNLSENQIGDIGAQVIADALKVNTTLKYLVLSANQIGAAGAHAIAELLK 145

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ +  L L+ N I  +G  ++AEAL  N  +  L L  N  G +GA  +A+G++ N  
Sbjct: 146 VNTQMGWLSLHRNRIGDAGAQTIAEALKVNPPLTYLDLRENQIGDIGAQEIAEGIKVNTR 205

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           L  L L  N IG+ G++A      +RK   A  D+G
Sbjct: 206 LGFLDLQLNCIGNAGLQAFD---EARKDNRASTDVG 238



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 110/223 (49%), Gaps = 14/223 (6%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L    IGD+    +A+ALK N T+T + L    I   GA AIA  L+  + +T L L  N
Sbjct: 18  LSQEQIGDQA---LAEALKVNTTLTELRLSYCQIGEAGARAIAEALRVTTTLTLLRLNVN 74

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG+ G + ++E LK +  +  L L   QIG  GA+ +AD L+ N T+  L L AN +  
Sbjct: 75  GIGSAGVRTIAEALKVNKTVTVLNLSENQIGDIGAQVIADALKVNTTLKYLVLSANQIGA 134

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNE 571
                   L   ++       M + SL  N +   GA+ +A++ KV N  LT +DL  N+
Sbjct: 135 AGAHAIAELLKVNT------QMGWLSLHRNRIGDAGAQTIAEALKV-NPPLTYLDLRENQ 187

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 614
           I D GA  IA+ +K N  +    L L  N +   G  A  +A+
Sbjct: 188 IGDIGAQEIAEGIKVNTRLGFLDLQL--NCIGNAGLQAFDEAR 228



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 2/234 (0%)

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G +A    L+ N  L  L LS   IG+ G + + + L     +  L+L+   +   G + 
Sbjct: 24  GDQALAEALKVNTTLTELRLSYCQIGEAGARAIAEALRVTTTLTLLRLNVNGIGSAGVRT 83

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IAE LK N  + VL L+ N I   G   +A+AL  N+T++ L L+ N  GA GA+A+A+ 
Sbjct: 84  IAEALKVNKTVTVLNLSENQIGDIGAQVIADALKVNTTLKYLVLSANQIGAAGAHAIAEL 143

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N  +  L LH N IGD G + +   L      L  LD+  N I   GA  +AE IK 
Sbjct: 144 LKVNTQMGWLSLHRNRIGDAGAQTIAEALKVNP-PLTYLDLRENQIGDIGAQEIAEGIKV 202

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
              L +++L +N IG+ G +   +A K NR  T + +    +H +  S + R L
Sbjct: 203 NTRLGFLDLQLNCIGNAGLQAFDEARKDNRASTDVGI-DRQVHPRLFSLLPRRL 255



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 101/182 (55%), Gaps = 6/182 (3%)

Query: 333 RELHLHGNSIGDEGI-RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           REL L    IGD+ +  AL    +  + +L+   IG       GA  +AE ++   +L  
Sbjct: 14  RELVLSQEQIGDQALAEALKVNTTLTELRLSYCQIGE-----AGARAIAEALRVTTTLTL 68

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L +N IG  G   IA+ALK N+T+T ++L  N I   GA  IA  LK N+ +  L L+
Sbjct: 69  LRLNVNGIGSAGVRTIAEALKVNKTVTVLNLSENQIGDIGAQVIADALKVNTTLKYLVLS 128

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IGA GA A++E+LK +  +  L L   +IG +GA+ +A+ L+ N  ++ LDLR N +
Sbjct: 129 ANQIGAAGAHAIAELLKVNTQMGWLSLHRNRIGDAGAQTIAEALKVNPPLTYLDLRENQI 188

Query: 512 RD 513
            D
Sbjct: 189 GD 190


>gi|320169363|gb|EFW46262.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 350

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 38/218 (17%)

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L+    G   A+ IA+AL  N T T + L  N I   GA AIA  LK N+ +T L L+ 
Sbjct: 3   SLFSRQTGSAEAQAIAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSS 62

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   G +A++E LK +  +  L L   QIG +GA+ +A+ LR N T++ L L  N + 
Sbjct: 63  NRIRDTGTQAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIG 122

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
           D                                 GA+ LA++   VN  LT + L++N+I
Sbjct: 123 DA--------------------------------GAQALAEALH-VNSTLTDLTLSYNQI 149

Query: 573 RDDGAFAIAQALKANEDVAVTSLN-----LANNFLTKF 605
            D GA AIA+ALK  + +   SL+     LA + L +F
Sbjct: 150 GDAGAQAIAEALKVTQTMTTLSLDDQINPLALSLLPRF 187



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 81/144 (56%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +L +  N I   GA  +AE +K    L  ++L  N I D G + IA+ LK N+T+T ++L
Sbjct: 29  LLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTGTQAIAETLKVNKTLTYLNL 88

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   GA AIA  L+ N  +T L L  N IG  GA+AL+E L  +  +  L L + Q
Sbjct: 89  ESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQALAEALHVNSTLTDLTLSYNQ 148

Query: 483 IGASGAEFVADMLRYNNTISILDL 506
           IG +GA+ +A+ L+   T++ L L
Sbjct: 149 IGDAGAQAIAEALKVTQTMTTLSL 172



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 79/151 (52%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           +A  +A    L  N     L LS N I D G + + + L  N  +  L LSS  +RD G 
Sbjct: 11  SAEAQAIAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTGT 70

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +AIAE LK N  L  L L +N I ++G  ++AEAL  N T+  L L  N  G  GA ALA
Sbjct: 71  QAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQALA 130

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           + L  N +L +L L  N IGD G +A+   L
Sbjct: 131 EALHVNSTLTDLTLSYNQIGDAGAQAIAEAL 161



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 93/192 (48%), Gaps = 29/192 (15%)

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           G    + + + L  N     L+LS   + D GA+AIAE LK N+ L  L L++N I  +G
Sbjct: 10  GSAEAQAIAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTG 69

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             ++AE L  N T+  L+L  N  G  GA A+A+ L  NK+L  L L  N IGD G +AL
Sbjct: 70  TQAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQAL 129

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
                                    A HV   + +      + L  N IGD GA+ IA+A
Sbjct: 130 AE-----------------------ALHVNSTLTD------LTLSYNQIGDAGAQAIAEA 160

Query: 411 LKQNRTITTIDL 422
           LK  +T+TT+ L
Sbjct: 161 LKVTQTMTTLSL 172



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 85/167 (50%)

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
            R  G      +AE+L  N TA  +  + N I  AG +A    L+ N  L  L+LS N I
Sbjct: 6   SRQTGSAEAQAIAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRI 65

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
            D G + + + L  N  +  L L S  +   GA+AIAE L+ N  L  L L  N I  +G
Sbjct: 66  RDTGTQAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAG 125

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             +LAEAL  NST+  L L+ N  G  GA A+A+ L+  +++  L L
Sbjct: 126 AQALAEALHVNSTLTDLTLSYNQIGDAGAQAIAEALKVTQTMTTLSL 172



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 73/135 (54%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +    +   + L  N I D GA  IA+ LK N  +T + L  N I   G  AIA  
Sbjct: 17  IAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTGTQAIAET 76

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N  +T L+L  N IG  GA+A++E L+ +  +  L L   QIG +GA+ +A+ L  N
Sbjct: 77  LKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQALAEALHVN 136

Query: 499 NTISILDLRANGLRD 513
           +T++ L L  N + D
Sbjct: 137 STLTDLTLSYNQIGD 151



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 71/142 (50%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G   +AE+L  N    E+  ++N I   G +A    L+ N  L  LNL  N
Sbjct: 32  LSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTGTQAIAETLKVNKTLTYLNLESN 91

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG  G + + + L  N  + RL L    + D GA+A+AE L  NS L  L L+ N I  
Sbjct: 92  QIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQALAEALHVNSTLTDLTLSYNQIGD 151

Query: 289 SGFTSLAEALLENSTIRSLHLN 310
           +G  ++AEAL    T+ +L L+
Sbjct: 152 AGAQAIAEALKVTQTMTTLSLD 173



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G   +AE+L  N+T   ++  +N I  AG +A    L+ N  L  L
Sbjct: 55  LTELHLSSNRIRDTGTQAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRL 114

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N IGD G + L + L  N+ +  L LS   + D GA+AIAE LK    +  L L++
Sbjct: 115 GLELNQIGDAGAQALAEALHVNSTLTDLTLSYNQIGDAGAQAIAEALKVTQTMTTLSLDD 174

Query: 284 NM 285
            +
Sbjct: 175 QI 176


>gi|320165495|gb|EFW42394.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 656

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + DE +  +AE LK N+ L+VL L +N I  +G  ++  AL   + +  L+L+ N  G  
Sbjct: 29  ITDEDSLVVAEGLKENNNLQVLTLYDNQIGDAGAQAIGSALRNKANLSILYLSQNKIGDA 88

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA A+A+GL+ + +L +L +  N IGD G RA+ S L + K  L++L++  N IS  GA 
Sbjct: 89  GARAIAEGLQTSTALTDLRMSVNQIGDAGARAIGSALRT-KEDLSILNLSENKISDIGAC 147

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A+ ++    L  + L+ N IGD GA+ I  AL+    ++ + L  N I    +S++ +
Sbjct: 148 AIAKGLQTSSELTELWLFKNQIGDAGAQAIGSALRNMANLSILYLWDNRI----SSSVVK 203

Query: 438 VLKDN 442
           VL +N
Sbjct: 204 VLSNN 208



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 99/174 (56%), Gaps = 1/174 (0%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+GL+ N +L+ L L+ N IGD G +A+ S L + K  L++L +  N I   GA  +AE
Sbjct: 37  VAEGLKENNNLQVLTLYDNQIGDAGAQAIGSALRN-KANLSILYLSQNKIGDAGARAIAE 95

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++   +L  + + +N IGD GA  I  AL+    ++ ++L  N I   GA AIA+ L+ 
Sbjct: 96  GLQTSTALTDLRMSVNQIGDAGARAIGSALRTKEDLSILNLSENKISDIGACAIAKGLQT 155

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           +S +T L L  N IG  GA+A+   L+   N++ L L   +I +S  + +++ L
Sbjct: 156 SSELTELWLFKNQIGDAGAQAIGSALRNMANLSILYLWDNRISSSVVKVLSNNL 209



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 86/182 (47%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DE    +AE L  N   + ++   N I  AG +A    L++   L  L LS N IGD G 
Sbjct: 31  DEDSLVVAEGLKENNNLQVLTLYDNQIGDAGAQAIGSALRNKANLSILYLSQNKIGDAGA 90

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + + + L  +  +  L++S   + D GA+AI   L+    L +L L+ N I   G  ++A
Sbjct: 91  RAIAEGLQTSTALTDLRMSVNQIGDAGARAIGSALRTKEDLSILNLSENKISDIGACAIA 150

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           + L  +S +  L L  N  G  GA A+   L    +L  L+L  N I    ++ L + L 
Sbjct: 151 KGLQTSSELTELWLFKNQIGDAGAQAIGSALRNMANLSILYLWDNRISSSVVKVLSNNLP 210

Query: 356 SR 357
           ++
Sbjct: 211 AK 212



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 77/143 (53%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+ + +  VAE +K   +L  + LY N IGD GA+ I  AL+    ++ + L  N I   
Sbjct: 29  ITDEDSLVVAEGLKENNNLQVLTLYDNQIGDAGAQAIGSALRNKANLSILYLSQNKIGDA 88

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  L+ ++ +T L ++ N IG  GA+A+   L+   +++ L L   +I   GA  
Sbjct: 89  GARAIAEGLQTSTALTDLRMSVNQIGDAGARAIGSALRTKEDLSILNLSENKISDIGACA 148

Query: 491 VADMLRYNNTISILDLRANGLRD 513
           +A  L+ ++ ++ L L  N + D
Sbjct: 149 IAKGLQTSSELTELWLFKNQIGD 171



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 1/125 (0%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DE +  +A+ LK+N  +  + L  N I   GA AI   L++ + ++ L L+ N IG  
Sbjct: 29  ITDEDSLVVAEGLKENNNLQVLTLYDNQIGDAGAQAIGSALRNKANLSILYLSQNKIGDA 88

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD-EVCS 517
           GA+A++E L+    +  L++   QIG +GA  +   LR    +SIL+L  N + D   C+
Sbjct: 89  GARAIAEGLQTSTALTDLRMSVNQIGDAGARAIGSALRTKEDLSILNLSENKISDIGACA 148

Query: 518 GCNGL 522
              GL
Sbjct: 149 IAKGL 153



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 35/160 (21%)

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           ++E LK + N+  L L   QIG +GA+ +   LR    +SIL L  N + D         
Sbjct: 37  VAEGLKENNNLQVLTLYDNQIGDAGAQAIGSALRNKANLSILYLSQNKIGDA-------- 88

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
                                   GA+ +A+  +  + ALT + ++ N+I D GA AI  
Sbjct: 89  ------------------------GARAIAEGLQT-STALTDLRMSVNQIGDAGARAIGS 123

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 622
           AL+  ED+++  LNL+ N ++  G  A+        E++E
Sbjct: 124 ALRTKEDLSI--LNLSENKISDIGACAIAKGLQTSSELTE 161


>gi|397644082|gb|EJK76242.1| hypothetical protein THAOC_02009 [Thalassiosira oceanica]
          Length = 773

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 130/252 (51%), Gaps = 5/252 (1%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L  E    + + ++++S L+ + L    +D      L +A+  + +I +++L GN  G  
Sbjct: 24  LTPEDEALLLDTIRDSSCLKSISLQGCRLDTELLLKLLDAMSRSCSIENINLAGNRVGEE 83

Query: 318 GANAL-AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           G   L A  L    SL +L L    +G   +  L  GL+  +  L  LD+ +N + A G 
Sbjct: 84  GTKRLGAILLSMETSLAKLELSNTYLGANEVLHLTKGLAKSRS-LRYLDLDDNQVGATGM 142

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            +++E +K   SL  I L+ N+IG  G   +++AL QNR +  + +  N I    A ++ 
Sbjct: 143 VYLSEALKTNTSLAEIYLHGNNIGSSGLNHLSEALSQNRGLKCVGVTSNYICDSCAGSLL 202

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           R L+ N+ ++SLDL+ N IG + A +L+EVLK +  +  L L   ++   GA  +A+ L 
Sbjct: 203 RGLRLNTYLSSLDLSGNCIGDEAAASLAEVLKKNNTLKRLVLSNNEVTNRGARLLAESLV 262

Query: 497 YNNT---ISILD 505
             N+   ISI+D
Sbjct: 263 LQNSLKHISIID 274



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 116/258 (44%), Gaps = 2/258 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  E +  L +  ++     S+ + G     E L  L +++  + + E ++ A N +   
Sbjct: 24  LTPEDEALLLDTIRDSSCLKSISLQGCRLDTELLLKLLDAMSRSCSIENINLAGNRVGEE 83

Query: 206 GIKAFDGVLQS-NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           G K    +L S   +L  L LS   +G   V  L   L  +  +  L L    +   G  
Sbjct: 84  GTKRLGAILLSMETSLAKLELSNTYLGANEVLHLTKGLAKSRSLRYLDLDDNQVGATGMV 143

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            ++E LK N+ L  + L+ N I  SG   L+EAL +N  ++ + +  NY     A +L +
Sbjct: 144 YLSEALKTNTSLAEIYLHGNNIGSSGLNHLSEALSQNRGLKCVGVTSNYICDSCAGSLLR 203

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GL  N  L  L L GN IGDE   +L   L  +   L  L + NN ++ +GA  +AE + 
Sbjct: 204 GLRLNTYLSSLDLSGNCIGDEAAASLAEVL-KKNNTLKRLVLSNNEVTNRGARLLAESLV 262

Query: 385 NCKSLLWINLYMNDIGDE 402
              SL  I++  N   DE
Sbjct: 263 LQNSLKHISIIDNVCDDE 280



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 46/321 (14%)

Query: 288 YSGFTSLAEALL-----ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           Y   T   EALL     ++S ++S+ L G          L   +  + S+  ++L GN +
Sbjct: 21  YCPLTPEDEALLLDTIRDSSCLKSISLQGCRLDTELLLKLLDAMSRSCSIENINLAGNRV 80

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G+EG + L + L S +  LA L++ N  + A    H+ + +   +SL +++L  N +G  
Sbjct: 81  GEEGTKRLGAILLSMETSLAKLELSNTYLGANEVLHLTKGLAKSRSLRYLDLDDNQVGAT 140

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G   +++ALK N ++  I L GNNI S G + ++  L  N  +  + +  N I    A +
Sbjct: 141 GMVYLSEALKTNTSLAEIYLHGNNIGSSGLNHLSEALSQNRGLKCVGVTSNYICDSCAGS 200

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           L       G                       LR N  +S LDL  N + DE  +    L
Sbjct: 201 L-----LRG-----------------------LRLNTYLSSLDLSGNCIGDEAAA---SL 229

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE--------IRD 574
           +       +LK ++  +  +   +GA+ LA+S  V+  +L  I +  N         +RD
Sbjct: 230 AEVLKKNNTLKRLVLSNNEVTN-RGARLLAESL-VLQNSLKHISIIDNVCDDEWVGIVRD 287

Query: 575 DGAFAIAQALKANEDVAVTSL 595
                 A+A KA E + V +L
Sbjct: 288 LVHVDTAEAAKATELLQVRTL 308



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 91/185 (49%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +++S    G   +  L + L  +++   +    N + A G+      L++N +L  
Sbjct: 98  SLAKLELSNTYLGANEVLHLTKGLAKSRSLRYLDLDDNQVGATGMVYLSEALKTNTSLAE 157

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           + L GN IG  G+  L + L  N G++ + ++S  + D  A ++   L+ N+ L  L+L+
Sbjct: 158 IYLHGNNIGSSGLNHLSEALSQNRGLKCVGVTSNYICDSCAGSLLRGLRLNTYLSSLDLS 217

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I      SLAE L +N+T++ L L+ N     GA  LA+ L    SL+ + +  N  
Sbjct: 218 GNCIGDEAAASLAEVLKKNNTLKRLVLSNNEVTNRGARLLAESLVLQNSLKHISIIDNVC 277

Query: 343 GDEGI 347
            DE +
Sbjct: 278 DDEWV 282



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 14/147 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            SS+D+SG   GDE    LAE L  N T + +  + N +T  G +     L    +LK +
Sbjct: 211 LSSLDLSGNCIGDEAAASLAEVLKKNNTLKRLVLSNNEVTNRGARLLAESLVLQNSLKHI 270

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNA----GVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           ++  N   DE V  + D++ VD A      E LQ+ +  LR   ++ I    KN  I  V
Sbjct: 271 SIIDNVCDDEWVGIVRDLVHVDTAEAAKATELLQVRT--LRFYASETIRN--KNLEIKDV 326

Query: 279 LE-----LNNNMIDYSGFTSLAEALLE 300
            E      N+ ++  S   +LA++++E
Sbjct: 327 DEKYQALYNSELVPKSSLKTLAKSIIE 353


>gi|428161855|gb|EKX31100.1| hypothetical protein GUITHDRAFT_83406, partial [Guillardia theta
           CCMP2712]
          Length = 376

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 156/363 (42%), Gaps = 65/363 (17%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  +    ++ VD+ G    DEG   LA  L  +++   +  ++N I + G  A    L+
Sbjct: 16  ELLRSHPTYTHVDLGGNTIKDEGAKTLAGMLAESRSIRTLVLSSNEIGSEGASALFAALK 75

Query: 216 SNIALKTLNLS------GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            N  L+TL+L        N IG    + L   L  N  +  L L+  +   EG +AIAE 
Sbjct: 76  LNGCLETLDLGLVDNGRKNRIGRPCARDLAGALRGNETLTSLSLAGNNFGSEGCRAIAEG 135

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK----- 324
            ++N+ ++ L+L+ N I     +  A A L  +++ +L+L+ N  G  G  ++AK     
Sbjct: 136 FEHNTRVKHLDLSMNKIRGEVASLFASAFLSGASLETLNLSSNQVGHQGCASIAKMLSSD 195

Query: 325 ------------------------GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
                                   GLE N+ L EL L GN +G  G  +L   L+  K  
Sbjct: 196 SLLLRSLNLSGNLVGPKAAALLAAGLENNRLLSELQLAGNELGATGCTSLSGSLN--KCN 253

Query: 361 LAVLDIGNNSISAKGAFH----------------------------VAEYIKNCKSLLWI 392
           + +L +G N+I  +G                               V++ +++  SL  +
Sbjct: 254 VTLLALGENNIGDEGTLMLMRKLAENSSLKSLDLSSNQIGDYGGVAVSKMLQSNASLTSL 313

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           NL  N IGD G  +IA  L +N  +  + L  N  H K  SA+   L+ N  +T LD+++
Sbjct: 314 NLEKNLIGDRGGVEIAQGLGRNGVLLQLSLKSNMFHDKTGSALVVALRANKTLTELDVSW 373

Query: 453 NPI 455
           N I
Sbjct: 374 NDI 376



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 162/352 (46%), Gaps = 37/352 (10%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           G+   G  A   +L+S+     ++L GN I DEG K L  +L ++  +  L LSS ++  
Sbjct: 5   GLGGHGATAVAELLRSHPTYTHVDLGGNTIKDEGAKTLAGMLAESRSIRTLVLSSNEIGS 64

Query: 261 EGAKAIAELLKNNSILRVLELN------NNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           EGA A+   LK N  L  L+L        N I       LA AL  N T+ SL L GN  
Sbjct: 65  EGASALFAALKLNGCLETLDLGLVDNGRKNRIGRPCARDLAGALRGNETLTSLSLAGNNF 124

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G+ G  A+A+G E N  ++ L L  N I  E + +L +        L  L++ +N +  +
Sbjct: 125 GSEGCRAIAEGFEHNTRVKHLDLSMNKIRGE-VASLFASAFLSGASLETLNLSSNQVGHQ 183

Query: 375 GAFHVAEY-----------------------------IKNCKSLLWINLYMNDIGDEGAE 405
           G   +A+                              ++N + L  + L  N++G  G  
Sbjct: 184 GCASIAKMLSSDSLLLRSLNLSGNLVGPKAAALLAAGLENNRLLSELQLAGNELGATGCT 243

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            ++ +L +   +T + LG NNI  +G   + R L +NS + SLDL+ N IG  G  A+S+
Sbjct: 244 SLSGSLNKC-NVTLLALGENNIGDEGTLMLMRKLAENSSLKSLDLSSNQIGDYGGVAVSK 302

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
           +L+ + ++ +L L    IG  G   +A  L  N  +  L L++N   D+  S
Sbjct: 303 MLQSNASLTSLNLEKNLIGDRGGVEIAQGLGRNGVLLQLSLKSNMFHDKTGS 354



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 15/192 (7%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G  GA  +A+ L+ + T T +DLGGN I  +GA  +A +L ++  I +L L+ N IG++
Sbjct: 6   LGGHGATAVAELLRSHPTYTHVDLGGNTIKDEGAKTLAGMLAESRSIRTLVLSSNEIGSE 65

Query: 459 GAKALSEVLKFHGNINTLKLGWC------QIGASGAEFVADMLRYNNTISILDLRANGLR 512
           GA AL   LK +G + TL LG        +IG   A  +A  LR N T++ L L  N   
Sbjct: 66  GASALFAALKLNGCLETLDLGLVDNGRKNRIGRPCARDLAGALRGNETLTSLSLAGNNFG 125

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAFN 570
            E   GC  ++        +KH+    L +N ++G  A   A +F +   +L +++L+ N
Sbjct: 126 SE---GCRAIAEGFEHNTRVKHL---DLSMNKIRGEVASLFASAF-LSGASLETLNLSSN 178

Query: 571 EIRDDGAFAIAQ 582
           ++   G  +IA+
Sbjct: 179 QVGHQGCASIAK 190



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 146/347 (42%), Gaps = 62/347 (17%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G T++AE L  + T   + L GN     GA  LA  L  ++S+R L L  N IG EG  A
Sbjct: 10  GATAVAELLRSHPTYTHVDLGGNTIKDEGAKTLAGMLAESRSIRTLVLSSNEIGSEGASA 69

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L + L    G L  LD+G                      L  N   N IG   A  +A 
Sbjct: 70  LFAALK-LNGCLETLDLG----------------------LVDNGRKNRIGRPCARDLAG 106

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           AL+ N T+T++ L GNN  S+G  AIA   + N+ +  LDL+ N I  + A   +     
Sbjct: 107 ALRGNETLTSLSLAGNNFGSEGCRAIAEGFEHNTRVKHLDLSMNKIRGEVASLFASAFLS 166

Query: 470 HGNINTLKLGWCQIGASGAEFVADM-----------------------------LRYNNT 500
             ++ TL L   Q+G  G   +A M                             L  N  
Sbjct: 167 GASLETLNLSSNQVGHQGCASIAKMLSSDSLLLRSLNLSGNLVGPKAAALLAAGLENNRL 226

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-N 559
           +S L L  N L     +GC  LS       +  ++   +L  N +     L    K+  N
Sbjct: 227 LSELQLAGNELG---ATGCTSLS----GSLNKCNVTLLALGENNIGDEGTLMLMRKLAEN 279

Query: 560 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            +L S+DL+ N+I D G  A+++ L++N   ++TSLNL  N +   G
Sbjct: 280 SSLKSLDLSSNQIGDYGGVAVSKMLQSN--ASLTSLNLEKNLIGDRG 324


>gi|399497974|emb|CCG20315.1| Ran GTPase activating protein 2 [Solanum kurtzianum]
          Length = 553

 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+++ L      LAVL++  N I+A+
Sbjct: 339 GPEVGPVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLESQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  + + L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGPVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AI   LK+++  L VLE+  N I     ++
Sbjct: 343 GPVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLESQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG-CNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGPVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +  + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIVNALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|449472441|ref|XP_004175237.1| PREDICTED: protein NLRC5 [Taeniopygia guttata]
          Length = 1834

 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 1/313 (0%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
              ++ ++ AGI +    LQ+  A++ LNL    +    +  L   L +   ++RL L   
Sbjct: 1501 LTSSSVSPAGIDSLISGLQNCQAIEELNLGYMHLSSAAIPGLVLGLCEMPSLKRLSLDHN 1560

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             + ++G   +AE L+    +  + L++N I   G  +LA  LLE   ++ + L+GN    
Sbjct: 1561 SIGNDGCSRLAEALRKMHNIEEINLSHNEIGDPGLINLAAVLLEMQNLKKIDLSGNCPSP 1620

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             G   L + L   K ++EL L  N  GD     L   L      L +L   NN+I   G 
Sbjct: 1621 AGGEKLVEALANCKHIKELLLSRNGFGDRTAVTLALCL-PHMTNLKILHFQNNNIRQAGG 1679

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              +A  +  C  L  I++  ND+G++    +++ L   R +  IDL    I    + +++
Sbjct: 1680 LELARALAVCGLLEEISIAENDLGEQSIHALSEGLPCFRHLRKIDLKFCGITDDASKSLS 1739

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
               +    +  + L++N +G  GA+ L+  L     +  L L   +IGA GA  +A+ L 
Sbjct: 1740 LGFQQCPSMEEIILSWNALGDRGARELAIALPKMEKLKVLDLEKNRIGACGATKLAEELA 1799

Query: 497  YNNTISILDLRAN 509
                I  + L  N
Sbjct: 1800 TCPEIQSIRLWGN 1812



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 33/308 (10%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
            E+ +   + +   + G++G   LAE+L      EE++ + N I   G+     VL     
Sbjct: 1548 EMPSLKRLSLDHNSIGNDGCSRLAEALRKMHNIEEINLSHNEIGDPGLINLAAVLLEMQN 1607

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            LK ++LSGN     G + L + L +   ++ L LS     D  A  +A  L + + L++L
Sbjct: 1608 LKKIDLSGNCPSPAGGEKLVEALANCKHIKELLLSRNGFGDRTAVTLALCLPHMTNLKIL 1667

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
               NN I  +G   LA AL     +  + +  N  G    +AL++GL   + LR++ L  
Sbjct: 1668 HFQNNNIRQAGGLELARALAVCGLLEEISIAENDLGEQSIHALSEGLPCFRHLRKIDLKF 1727

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
              I D+  ++L  G                              + C S+  I L  N +
Sbjct: 1728 CGITDDASKSLSLGF-----------------------------QQCPSMEEIILSWNAL 1758

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            GD GA ++A AL +   +  +DL  N I + GA+ +A  L     I S+ L  NP+    
Sbjct: 1759 GDRGARELAIALPKMEKLKVLDLEKNRIGACGATKLAEELATCPEIQSIRLWGNPV---- 1814

Query: 460  AKALSEVL 467
             K L E L
Sbjct: 1815 PKGLPETL 1822



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 146/336 (43%), Gaps = 2/336 (0%)

Query: 145  KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
            +L  +  + L      L    +  ++  +    G+  L   L   Q  EE++     +++
Sbjct: 1477 ELHEDEAEMLGRILLPLPELKTFGLTSSSVSPAGIDSLISGLQNCQAIEELNLGYMHLSS 1536

Query: 205  AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            A I      L    +LK L+L  N IG++G   L + L     +E + LS  ++ D G  
Sbjct: 1537 AAIPGLVLGLCEMPSLKRLSLDHNSIGNDGCSRLAEALRKMHNIEEINLSHNEIGDPGLI 1596

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
             +A +L     L+ ++L+ N    +G   L EAL     I+ L L+ N  G   A  LA 
Sbjct: 1597 NLAAVLLEMQNLKKIDLSGNCPSPAGGEKLVEALANCKHIKELLLSRNGFGDRTAVTLAL 1656

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
             L    +L+ LH   N+I   G   L   L+   G L  + I  N +  +    ++E + 
Sbjct: 1657 CLPHMTNLKILHFQNNNIRQAGGLELARALAV-CGLLEEISIAENDLGEQSIHALSEGLP 1715

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
              + L  I+L    I D+ ++ ++   +Q  ++  I L  N +  +GA  +A  L     
Sbjct: 1716 CFRHLRKIDLKFCGITDDASKSLSLGFQQCPSMEEIILSWNALGDRGARELAIALPKMEK 1775

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            +  LDL  N IGA GA  L+E L     I +++L W
Sbjct: 1776 LKVLDLEKNRIGACGATKLAEELATCPEIQSIRL-W 1810



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 97/461 (21%), Positives = 173/461 (37%), Gaps = 96/461 (20%)

Query: 145  KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
            +LF +  + +    +     S VD+SG   GDEG   L ESL     +++++ + N ++ 
Sbjct: 887  RLFPQHAKMIVAILQSCPCLSEVDLSGNKLGDEGCSCLLESLPCISISKQLNLSQNHLSV 946

Query: 205  AGIKAF-------DGVLQSNIAL---------------KTLNLSGNPI--------GDEG 234
             GI +          V++  ++L                +L     P+        G+E 
Sbjct: 947  TGICSLLKSVNTCQKVMELQVSLGHDTAVLRFREDREIVSLLPREKPVFSTDDQQHGEEN 1006

Query: 235  --------------------VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
                                +K +C +L +   +  L LS   L DEG   + + L    
Sbjct: 1007 QTPTTSQKIRLTECNFQASDLKNVCAVLKECGHISELDLSWNYLGDEGLLQLFQCLPKLK 1066

Query: 275  ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG------------------GA 316
            +LR L+ NNN I  +    LA++L     I+++ L+  +                   G 
Sbjct: 1067 MLRSLKFNNNQISLNSVFFLAQSLTTLEHIKTMSLSLGHTQVVHLTFWERVSLRDCRVGL 1126

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                 L + L     L E+ L GNS+ D+ I  L+S L S    L++L I  NS+S + A
Sbjct: 1127 EDVTRLCQILAQCPQLTEIDLSGNSLSDQSIERLLSFLPSL-CHLSLLSIRKNSLSPRCA 1185

Query: 377  FHVAEYIKNCKSLLWINLYMND-----------------------IGDEGAEKIADALKQ 413
              +   I  C+ +  + +  ++                       I +   E++   L+Q
Sbjct: 1186 VLLLNSINLCERIRVVEVRSSENAFLHLGASMQSRRTSCRLTGCAIAEGQVEELCSILEQ 1245

Query: 414  NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +  +  +DL  N +  +G   +   L       SL+L++N I  DG   L        N 
Sbjct: 1246 HGGLAEVDLSRNQLGDEGLRCLLDHLHRVPGTCSLNLSHNGISQDGVLHLINAFVTSRNT 1305

Query: 474  NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
              +++  C    S A  +  +   ++   IL L    L+ E
Sbjct: 1306 TEVQVSLC----SKATLIIKLTSGDDPRKILRLAECNLQPE 1342



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 12/321 (3%)

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
            L   LL    +++  L  +     G ++L  GL+  +++ EL+L    +    I  L+ G
Sbjct: 1486 LGRILLPLPELKTFGLTSSSVSPAGIDSLISGLQNCQAIEELNLGYMHLSSAAIPGLVLG 1545

Query: 354  LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            L      L  L + +NSI   G   +AE ++   ++  INL  N+IGD G   +A  L +
Sbjct: 1546 LCEMPS-LKRLSLDHNSIGNDGCSRLAEALRKMHNIEEINLSHNEIGDPGLINLAAVLLE 1604

Query: 414  NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
             + +  IDL GN     G   +   L +   I  L L+ N  G   A  L+  L    N+
Sbjct: 1605 MQNLKKIDLSGNCPSPAGGEKLVEALANCKHIKELLLSRNGFGDRTAVTLALCLPHMTNL 1664

Query: 474  NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
              L      I  +G   +A  L     +  + +  N L      G   +      +   +
Sbjct: 1665 KILHFQNNNIRQAGGLELARALAVCGLLEEISIAENDL------GEQSIHALSEGLPCFR 1718

Query: 534  HM--LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
            H+  +    C      +K L+  F+    ++  I L++N + D GA  +A AL   E + 
Sbjct: 1719 HLRKIDLKFCGITDDASKSLSLGFQQC-PSMEEIILSWNALGDRGARELAIALPKMEKLK 1777

Query: 592  VTSLNLANNFLTKFGQSALTD 612
            V  L+L  N +   G + L +
Sbjct: 1778 V--LDLEKNRIGACGATKLAE 1796



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 18/221 (8%)

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           ++ G L      + L G K++  L       GD+   AL  GL   +  L  L++   +I
Sbjct: 705 DFAGCLVDTDCLEVLAGCKNVEHLSFRSRRCGDDFAAALSKGLQGMRN-LKKLELTGGTI 763

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           +A+G  ++ +    C  L  INL  N I D   +++ D   +   +  +DL  N++  K 
Sbjct: 764 TAEGMTNLVQAASQCPHLEEINLQGNRIQDPEVKRVMDLFSRMEKLKKVDLSNNHLSLKA 823

Query: 432 ASAIAR-------VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN----INTLKLGW 480
             ++A+       V +  + + ++ + ++  G  G    S+ LK   N    I    +  
Sbjct: 824 VLSLAKEGIVCQNVTELCARVDTMIIYFS--GTSGKAQRSQDLKLEENNEHIIPARHVNL 881

Query: 481 C----QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
           C    ++    A+ +  +L+    +S +DL  N L DE CS
Sbjct: 882 CLQDHRLFPQHAKMIVAILQSCPCLSEVDLSGNKLGDEGCS 922



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 142/389 (36%), Gaps = 70/389 (17%)

Query: 184  ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
            E L   +  E +SF +         A    LQ    LK L L+G  I  EG+  L     
Sbjct: 717  EVLAGCKNVEHLSFRSRRCGDDFAAALSKGLQGMRNLKKLELTGGTITAEGMTNLVQAAS 776

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA--LLEN 301
                +E + L    ++D   K + +L      L+ ++L+NN +      SLA+   + +N
Sbjct: 777  QCPHLEEINLQGNRIQDPEVKRVMDLFSRMEKLKKVDLSNNHLSLKAVLSLAKEGIVCQN 836

Query: 302  ST-------IRSLHLNGNYGGA--------------------------------LGANAL 322
             T          ++ +G  G A                                  A  +
Sbjct: 837  VTELCARVDTMIIYFSGTSGKAQRSQDLKLEENNEHIIPARHVNLCLQDHRLFPQHAKMI 896

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
               L+    L E+ L GN +GDEG   L+  L         L++  N +S  G   + + 
Sbjct: 897  VAILQSCPCLSEVDLSGNKLGDEGCSCLLESLPCISIS-KQLNLSQNHLSVTGICSLLKS 955

Query: 383  IKNCKSLLWINLYMNDIGDEGA-------EKIADAL---------------KQNRTITT- 419
            +  C+ ++ + +    +G + A        +I   L               ++N+T TT 
Sbjct: 956  VNTCQKVMELQV---SLGHDTAVLRFREDREIVSLLPREKPVFSTDDQQHGEENQTPTTS 1012

Query: 420  --IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
              I L   N  +     +  VLK+   I+ LDL++N +G +G   L + L     + +LK
Sbjct: 1013 QKIRLTECNFQASDLKNVCAVLKECGHISELDLSWNYLGDEGLLQLFQCLPKLKMLRSLK 1072

Query: 478  LGWCQIGASGAEFVADMLRYNNTISILDL 506
                QI  +   F+A  L     I  + L
Sbjct: 1073 FNNNQISLNSVFFLAQSLTTLEHIKTMSL 1101


>gi|441597766|ref|XP_004087407.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC5 [Nomascus leucogenys]
          Length = 1712

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 13/297 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1343 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1402

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1403 LSHLLLNSSTLALLTHGLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1462

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1463 RIGDAGVQHLATILPGLP-ELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1521

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1522 DPTALALAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPSLEEISLAENNLAGG-- 1577

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE
Sbjct: 1578 -----VLRFSKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDE 1629



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 7/297 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+S        L  L   L +    + +    N I   G       L++  +L+ L+LS
Sbjct: 1401 LDLSHLLLNSSTLALLTHGLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLS 1460

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD GV+ L  IL     + ++ LS   +   G   +AE L     L  L L  N +
Sbjct: 1461 HNRIGDAGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNAL 1520

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                  +LA+ L ++  +R LHL  ++ G  GA +LA+ L+G+ SL E+ L  N++    
Sbjct: 1521 GDPTALALAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPSLEEISLAENNLAGGV 1578

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +R      S     L  +D+ +  I  + A  +     +C +L  I L  N +GDE A +
Sbjct: 1579 LR-----FSKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAE 1633

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            +A  L Q   +  +DL  N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1634 LAQVLPQMGRLKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQRL 1690



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 159/364 (43%), Gaps = 17/364 (4%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D  +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1309 ARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1368

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L    +    +  L  GLS     L 
Sbjct: 1369 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHGLSHMTC-LQ 1427

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1428 SLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNRIGDAGVQHLATILPGLPELRKIDL 1487

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              N+I S G   +A  L     +  L L  N +G   A AL++ L  H  +  L L +  
Sbjct: 1488 SVNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALALAQELPQH--LRVLHLPFSH 1545

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
            +G  GA  +A  L  + ++  + L  N L         G+  F   +  L+ +   S  I
Sbjct: 1546 LGPGGALSLAQALDGSPSLEEISLAENNLA-------GGVLRFSKELPLLRQIDLVSCKI 1598

Query: 543  NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
            +  Q AK L  SF     AL  I L++N + D+ A  +AQ L   +   +  ++L  N +
Sbjct: 1599 DN-QTAKLLTSSFTSC-PALEVILLSWNLLGDEAAAELAQVLP--QMGRLKRVDLEKNQI 1654

Query: 603  TKFG 606
            T  G
Sbjct: 1655 TALG 1658



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 10/255 (3%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 1347 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 1406

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   +IG 
Sbjct: 1407 LLNSSTLALLTHGLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNRIGD 1466

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            +G + +A +L     +  +DL  N +     S   G+    S +   + +    L  N L
Sbjct: 1467 AGVQHLATILPGLPELRKIDLSVNSI-----SSAGGVQLAESLVLC-RRLEELMLGCNAL 1520

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFL 602
                 LA + + + + L  + L F+ +   GA ++AQAL  +   E++++   NLA   L
Sbjct: 1521 GDPTALALA-QELPQHLRVLHLPFSHLGPGGALSLAQALDGSPSLEEISLAENNLAGGVL 1579

Query: 603  TKFGQSALTDAKDLV 617
                +  L    DLV
Sbjct: 1580 RFSKELPLLRQIDLV 1594



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 93/467 (19%), Positives = 171/467 (36%), Gaps = 61/467 (13%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD------------ 244
            F    ++   +++   +L     L  ++LS N +GD G++CL + L              
Sbjct: 1106 FTGCSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPKVPISGSLEXVES 1165

Query: 245  --NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
              N   +  +LS    R E    +A  L  +  L  L L    +       L   +   +
Sbjct: 1166 SINDKYDPRELSECSFRPEHVSRLATGLSQSLQLTELTLTQCCLGQKQLAILLSLMGRPA 1225

Query: 303  TIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             + SL +   +    G  +L +   + + S+ E+ +  +    +    L         + 
Sbjct: 1226 GLFSLRVQEPWADRAGVLSLLEVCAQASGSVTEISI--SETQQQLCVQLEFPRQEENPEA 1283

Query: 362  AVLDIGNNSISAKGAFHVAEYIKNCK-----SLLWINLYMND------------------ 398
              L + +  +    +  V + I+ C      SL  +NL  +D                  
Sbjct: 1284 VALRLAHCDLGTHHSLLVGQLIETCARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELK 1343

Query: 399  --------IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
                    +  EG   +A  L     +  +DL  N    +G  A+ R L+   ++  LDL
Sbjct: 1344 TFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDL 1403

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
            ++  + +     L+  L     + +L+L    IG  G   +++ LR   ++  LDL  N 
Sbjct: 1404 SHLLLNSSTLALLTHGLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNR 1463

Query: 511  LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLA 568
            + D       G+    + +  L  +    L +N +   G   LA+S  V+   L  + L 
Sbjct: 1464 IGD------AGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESL-VLCRRLEELMLG 1516

Query: 569  FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
             N + D  A A+AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1517 CNALGDPTALALAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1559



 Score = 45.4 bits (106), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 13/206 (6%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      EEVSF  N ++   +     VL     L+ L+LS N
Sbjct: 606 LAGSKITARGISHLVKALPLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSN 665

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I    + CL  + V    V+ LQ    DL       I  L         L+ + ++ + 
Sbjct: 666 SICVSTLLCLARVAVTCPTVKMLQAREADL-------IFLLSPPTETTAELQRSPDLQES 718

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G    A+     S   +L L         A AL   L+    L E+ L GN + DEG R
Sbjct: 719 DGQRKGAQ-----SRSLTLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCR 773

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAK 374
            LM+  +S+      LD+ N ++S K
Sbjct: 774 -LMAEAASQLRITRKLDLANRTLSQK 798


>gi|326509281|dbj|BAJ91557.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326521232|dbj|BAJ96819.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 552

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 3/280 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L +  + I  E  K L +++     ++ L   +    
Sbjct: 225 NALGEKGVRAFTELLKSQGDLEELYVMNDGISGEAAKALSELIPSTEKLKVLHFHNNMTG 284

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA  IAE++K +  L     +   I   G  +LAEAL   + ++ L +  N  G    
Sbjct: 285 DEGAMPIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDIRDNLFGVEAG 344

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L     L EL+L   ++ +EG  A++  L     +L VL++  N I+AK A  V
Sbjct: 345 VALSKTLPKLGGLVELYLSDLNLENEGTIAIVDVLKQSAPQLEVLEMAGNEITAKAAKAV 404

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
           AE +   +SL  + L  N++ D GA  IA +L++    +  +D+  N     GA   A+ 
Sbjct: 405 AECLTAMQSLKKLTLAENELKDAGAVTIAKSLQEGHPGLEELDVSTNLFQRSGARCFAQA 464

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           + +      L++  N I  +G   + E+LK  G  N+L++
Sbjct: 465 VANKPGFALLNINSNFISDEGIDEVKEILK--GGENSLEV 502



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 138/278 (49%), Gaps = 12/278 (4%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           LR L++  N++G++G+RA    L S+ G L  L + N+ IS + A  ++E I + + L  
Sbjct: 217 LRYLNISDNALGEKGVRAFTELLKSQ-GDLEELYVMNDGISGEAAKALSELIPSTEKLKV 275

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++ + N  GDEGA  IA+ +K++  + +       I S G  A+A  L   + +  LD+ 
Sbjct: 276 LHFHNNMTGDEGAMPIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDIR 335

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTISILDLRANG 510
            N  G +   ALS+ L   G +  L L    +   G   + D+L+ +   + +L++  N 
Sbjct: 336 DNLFGVEAGVALSKTLPKLGGLVELYLSDLNLENEGTIAIVDVLKQSAPQLEVLEMAGNE 395

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVVNEALTSIDLA 568
           +          ++   +A+ SLK +   +L  N L+  GA  +A+S +  +  L  +D++
Sbjct: 396 I---TAKAAKAVAECLTAMQSLKKL---TLAENELKDAGAVTIAKSLQEGHPGLEELDVS 449

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            N  +  GA   AQA+      A+  LN+ +NF++  G
Sbjct: 450 TNLFQRSGARCFAQAVANKPGFAL--LNINSNFISDEG 485


>gi|407402832|gb|EKF29292.1| hypothetical protein MOQ_006932 [Trypanosoma cruzi marinkellei]
          Length = 447

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 156/302 (51%), Gaps = 4/302 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   ++  EG  A+A ++  ++ 
Sbjct: 60  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNEIGKEGCDALANVVNVSTK 118

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 119 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNAYLKSL 178

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A  +K  K L  + L 
Sbjct: 179 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNKCLTDLTLG 238

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +A+ LK+N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 239 NNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANP 298

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 299 IGSVGADEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 358

Query: 513 DE 514
           +E
Sbjct: 359 NE 360



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 3/308 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG E
Sbjct: 101 IGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHE 160

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGFT 292
           G   L   L  NA ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G  
Sbjct: 161 GAALLFRALEKNAYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQ 220

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +A A+  N  +  L L  N      A ALA+ L+ N +L  L L  N++   G+R L  
Sbjct: 221 LIANAVKGNKCLTDLTLGNNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILAR 280

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA  
Sbjct: 281 DGLANNMFLVSLSLSANPIGSVGADEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASL 340

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           +    T+  ++L GN + ++ A  ++R + ++  I+ +DL+ N IG  GA  L +  + +
Sbjct: 341 IAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQLN 400

Query: 471 GNINTLKL 478
             I++L L
Sbjct: 401 ARISSLLL 408



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 165/349 (47%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A  L  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 67  VDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNEIGKEGCDALANVVNVSTKLQLLDIR 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N+ L+ L+L+ N I
Sbjct: 126 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNAYLKSLDLSLNEI 185

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GNK L +L L GN+   +
Sbjct: 186 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNKCLTDLTL-GNNNATD 244

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 245 AAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGA 304

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +  +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 305 DEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 364

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS  +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 365 LSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNSI 413



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSV---ITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I++    I  +    I R + D      +  +DL  N +G +  + ++ +L+    +  +
Sbjct: 36  IEMAWTRITPELCEGICRTIVDRDADVPVRVVDLIDNQLGPEQTQKIASMLE-SSTVRDV 94

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L + +IG  G + +A+++  +  + +LD+R NGL     + C  +     +I     + 
Sbjct: 95  LLRYNEIGKEGCDALANVVNVSTKLQLLDIRGNGL----TAAC--VRKLLKSISMSTALT 148

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
              L  N +  +GA  L ++ +  N  L S+DL+ NEI   GA +IA  L
Sbjct: 149 RLGLSANKIGHEGAALLFRALEK-NAYLKSLDLSLNEIGPSGAESIAHLL 197



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 11/186 (5%)

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  +DL  N +  +    IA +L+ ++V   L L YN IG +G  AL+ V+     +  L
Sbjct: 64  VRVVDLIDNQLGPEQTQKIASMLESSTVRDVL-LRYNEIGKEGCDALANVVNVSTKLQLL 122

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            +    + A+    +   +  +  ++ L L AN +      G  G +    A+    ++ 
Sbjct: 123 DIRGNGLTAACVRKLLKSISMSTALTRLGLSANKI------GHEGAALLFRALEKNAYLK 176

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
              L +N +   GA+ +A    +    L ++ L  N +   G   IA A+K N+   +T 
Sbjct: 177 SLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNK--CLTD 234

Query: 595 LNLANN 600
           L L NN
Sbjct: 235 LTLGNN 240


>gi|320170412|gb|EFW47311.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 667

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 75/121 (61%)

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IGD GA+ IA+ALK N T+  +DL  N I S GA AIA  LK N+ +T LDL++
Sbjct: 3   SLSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSW 62

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+A++E  K +  +  L L   QI  +GA+ +A+ L  N T++ ++L  N + 
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 513 D 513
           D
Sbjct: 123 D 123



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 82/140 (58%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   GA  +AE +K   +L+ ++L+ N IG  GA+ IA+ALK N T+T +DL  N
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSWN 63

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA AIA   K N+ +T LDL ++ I   GA+A++E L  +  +  + L   QIG 
Sbjct: 64  EIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIGD 123

Query: 486 SGAEFVADMLRYNNTISILD 505
            GA  +A+ L+ N +++ L+
Sbjct: 124 LGAHAIAEALKVNTSLTDLN 143



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 89/175 (50%), Gaps = 35/175 (20%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I   GA AIA  LK N+ +  LDL  N IG+ GA+A++E LK +  +  L L W 
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSWN 63

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +IG +GA+ +A+  + N T++ LDL  + + D                            
Sbjct: 64  EIGEAGAQAIAEAFKVNTTVTKLDLHHSQISD---------------------------- 95

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                GA+ +A++  V N+ LT I+L  N+I D GA AIA+ALK N   ++T LN
Sbjct: 96  ----AGAQAIAEALNV-NKTLTRINLFDNQIGDLGAHAIAEALKVN--TSLTDLN 143



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 1/141 (0%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G +GA A+A+ L+ N +L EL LH N IG  G +A+   L      L  LD+  
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNT-TLTKLDLSW 62

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +AE  K   ++  ++L+ + I D GA+ IA+AL  N+T+T I+L  N I 
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 429 SKGASAIARVLKDNSVITSLD 449
             GA AIA  LK N+ +T L+
Sbjct: 123 DLGAHAIAEALKVNTSLTDLN 143



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD G +A+   L      L  LD+  N I + GA  +AE +K   +L  ++L  
Sbjct: 4   LSENQIGDVGAQAIAEALKVNT-TLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSW 62

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N+IG+ GA+ IA+A K N T+T +DL  + I   GA AIA  L  N  +T ++L  N IG
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 457 ADGAKALSEVLKFHGNINTL 476
             GA A++E LK + ++  L
Sbjct: 123 DLGAHAIAEALKVNTSLTDL 142



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 80/140 (57%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S + N I   G +A    L+ N  L  L+L  N IG  G + + + L  N  + +L LS 
Sbjct: 3   SLSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSW 62

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            ++ + GA+AIAE  K N+ +  L+L+++ I  +G  ++AEAL  N T+  ++L  N  G
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 316 ALGANALAKGLEGNKSLREL 335
            LGA+A+A+ L+ N SL +L
Sbjct: 123 DLGAHAIAEALKVNTSLTDL 142



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 5/158 (3%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IGD G + + + L  N  +  L L    +   GA+AIAE LK N+ L  L+L+ 
Sbjct: 3   SLSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSW 62

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  ++AEA   N+T+  L L+ +     GA A+A+ L  NK+L  ++L  N IG
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           D G  A+   L   K   ++ D+  NS S+  A  V E
Sbjct: 123 DLGAHAIAEAL---KVNTSLTDL--NSTSSAAAPSVPE 155



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 71/139 (51%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD G   +AE+L  N T  E+    N I +AG +A    L+ N  L  L+LS N
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSWN 63

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+ G + + +    N  V +L L    + D GA+AIAE L  N  L  + L +N I  
Sbjct: 64  EIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIGD 123

Query: 289 SGFTSLAEALLENSTIRSL 307
            G  ++AEAL  N+++  L
Sbjct: 124 LGAHAIAEALKVNTSLTDL 142



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 35/136 (25%)

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
           L   QIG  GA+ +A+ L+ N T+  LDL  N    ++ S                    
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQN----QIGSA------------------- 40

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
                    GA+ +A++ KV N  LT +DL++NEI + GA AIA+A K N    VT L+L
Sbjct: 41  ---------GAQAIAEALKV-NTTLTKLDLSWNEIGEAGAQAIAEAFKVN--TTVTKLDL 88

Query: 598 ANNFLTKFGQSALTDA 613
            ++ ++  G  A+ +A
Sbjct: 89  HHSQISDAGAQAIAEA 104



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 57/125 (45%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K       +D+     G  G   +AE+L  N T  ++  + N I  AG +A  
Sbjct: 15  QAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSWNEIGEAGAQAIA 74

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              + N  +  L+L  + I D G + + + L  N  + R+ L    + D GA AIAE LK
Sbjct: 75  EAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIGDLGAHAIAEALK 134

Query: 272 NNSIL 276
            N+ L
Sbjct: 135 VNTSL 139



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 46/104 (44%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +D+S    G+ G   +AE+   N T  ++    + I+ AG +A  
Sbjct: 43  QAIAEALKVNTTLTKLDLSWNEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIA 102

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
             L  N  L  +NL  N IGD G   + + L  N  +  L  +S
Sbjct: 103 EALNVNKTLTRINLFDNQIGDLGAHAIAEALKVNTSLTDLNSTS 146


>gi|148699225|gb|EDL31172.1| mCG18474 [Mus musculus]
          Length = 923

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 3/285 (1%)

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGV 248
           QT          I+ +  +     + +N  L  L+LSGN IG  G++ LC+ L      +
Sbjct: 604 QTQSTYLLKRCQISGSACQDLAAAVIANRNLIRLDLSGNSIGVPGLELLCEGLQHPRCRL 663

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-STIRSL 307
           + +QL    L     +++A +L NNS L  L+L  N ++ SG   L + L      +R+L
Sbjct: 664 QMIQLRKCLLEAAAGRSLASVLSNNSYLVELDLTGNPLEDSGLKLLCQGLRHPVCRLRTL 723

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L   + G      LA  L+ N+SL EL L  N +GD G+  L  GLS    KL  L +G
Sbjct: 724 WLKICHLGQASCKDLASTLKMNQSLLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLG 783

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNN 426
              + +     +A  ++    L  ++L  ND+GD G + + + L+ Q   +  + L    
Sbjct: 784 ICRLGSVACVGIASVLQVNTCLQELDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDSCG 843

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           + SK    ++ +L  +  +  L L  N +G  G   L + L+  G
Sbjct: 844 LTSKACEDLSSILGISQTLHELYLTNNALGDTGVCLLCKRLRHPG 888



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 3/255 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           R    +D+SG + G  GL  L E L + +   + +      + AA  ++   VL +N  L
Sbjct: 632 RNLIRLDLSGNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYL 691

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+L+GNP+ D G+K LC  L       R L L    L     K +A  LK N  L  L
Sbjct: 692 VELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCKDLASTLKMNQSLLEL 751

Query: 280 ELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +L  N +  SG   L E L   +  +++L L     G++    +A  L+ N  L+EL L 
Sbjct: 752 DLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLS 811

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +GD G++ L  GL  +  +L  L + +  +++K    ++  +   ++L  + L  N 
Sbjct: 812 FNDLGDRGLQLLGEGLRHQTCRLQKLWLDSCGLTSKACEDLSSILGISQTLHELYLTNNA 871

Query: 399 IGDEGAEKIADALKQ 413
           +GD G   +   L+ 
Sbjct: 872 LGDTGVCLLCKRLRH 886



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 116/274 (42%), Gaps = 32/274 (11%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE------------- 327
           L    I  S    LA A++ N  +  L L+GN  G  G   L +GL+             
Sbjct: 611 LKRCQISGSACQDLAAAVIANRNLIRLDLSGNSIGVPGLELLCEGLQHPRCRLQMIQLRK 670

Query: 328 ----------------GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                            N  L EL L GN + D G++ L  GL     +L  L +    +
Sbjct: 671 CLLEAAAGRSLASVLSNNSYLVELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHL 730

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSK 430
                  +A  +K  +SLL ++L +ND+GD G   + + L   +  + T+ LG   + S 
Sbjct: 731 GQASCKDLASTLKMNQSLLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSV 790

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAE 489
               IA VL+ N+ +  LDL++N +G  G + L E L+     +  L L  C + +   E
Sbjct: 791 ACVGIASVLQVNTCLQELDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDSCGLTSKACE 850

Query: 490 FVADMLRYNNTISILDLRANGLRDE-VCSGCNGL 522
            ++ +L  + T+  L L  N L D  VC  C  L
Sbjct: 851 DLSSILGISQTLHELYLTNNALGDTGVCLLCKRL 884



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 120/262 (45%), Gaps = 16/262 (6%)

Query: 330 KSLRELHLHGN--SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           +S   LHLHG+  S G E      SG+ ++   L    +    IS      +A  +   +
Sbjct: 577 RSTEVLHLHGSAYSTGMEDDPPEPSGVQTQSTYL----LKRCQISGSACQDLAAAVIANR 632

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           +L+ ++L  N IG  G E + + L+  R  +  I L    + +    ++A VL +NS + 
Sbjct: 633 NLIRLDLSGNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYLV 692

Query: 447 SLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            LDL  NP+   G K L + L+     + TL L  C +G +  + +A  L+ N ++  LD
Sbjct: 693 ELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCKDLASTLKMNQSLLELD 752

Query: 506 LRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLA-QSFKVVNEALT 563
           L  N L D  V   C GLS     + +L+      L I  L    C+   S   VN  L 
Sbjct: 753 LGLNDLGDSGVLLLCEGLSHPDCKLQTLR------LGICRLGSVACVGIASVLQVNTCLQ 806

Query: 564 SIDLAFNEIRDDGAFAIAQALK 585
            +DL+FN++ D G   + + L+
Sbjct: 807 ELDLSFNDLGDRGLQLLGEGLR 828



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D++G    D GL  L + L +       +      +  A  K     L+ N +L  L+L
Sbjct: 694 LDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCKDLASTLKMNQSLLELDL 753

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  LC+ L   +  ++ L+L    L       IA +L+ N+ L+ L+L+ N
Sbjct: 754 GLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLSFN 813

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +   G   L E L   +  ++ L L+     +     L+  L  +++L EL+L  N++G
Sbjct: 814 DLGDRGLQLLGEGLRHQTCRLQKLWLDSCGLTSKACEDLSSILGISQTLHELYLTNNALG 873

Query: 344 DEGIRALMSGLSSRKGKLAVL 364
           D G+  L   L     KL VL
Sbjct: 874 DTGVCLLCKRLRHPGCKLRVL 894


>gi|403307209|ref|XP_003944098.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 5 [Saimiri
            boliviensis boliviensis]
          Length = 1182

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 170  SGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
            +G    DEG+  L E L  +Q T ++++    G+TA G ++    L +N +L  L LS N
Sbjct: 884  AGNEVTDEGVKALGEVLKVSQCTLQKLTLQDCGLTATGCQSLASALITNHSLTHLCLSNN 943

Query: 229  PIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
             +G+EGV  LC  L + + G++RL L+  +L   G   +A  L  N+ L  L L+ N ++
Sbjct: 944  NLGNEGVTLLCRSLRLPHCGLQRLMLNHCNLDTAGCGFLALTLLGNARLMHLSLSMNPLE 1003

Query: 288  YSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             SG   L E + E S  +R L L      A    +LA  +  ++ LR L L  N++GD G
Sbjct: 1004 DSGVKLLCEVMREPSCHLRDLELVSCRLTAACCESLAYVIARSRYLRSLDLSENAVGDVG 1063

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            + AL  GL  R+  L  L + +  +++     ++  +   + L  +NL  ND    G  K
Sbjct: 1064 VAALCEGLKQRRSVLRRLGLKSCGLTSGCCEELSLALSCNRQLASLNLVQNDFSPTGMRK 1123

Query: 407  IADA 410
            +  A
Sbjct: 1124 LCSA 1127



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 4/306 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R   S+ +   +  +E +    E+L + +   E +     G+T A       +L ++ +L
Sbjct: 819  RNLRSLSLGSAHLKEEDVRMACEALKHPRCMLESLRLDCCGLTLACYLKISKILTTSRSL 878

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             +L+L+GN + DEGVK L ++L V    +++L L    L   G +++A  L  N  L  L
Sbjct: 879  SSLSLAGNEVTDEGVKALGEVLKVSQCTLQKLTLQDCGLTATGCQSLASALITNHSLTHL 938

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+NN +   G T L  +L L +  ++ L LN       G   LA  L GN  L  L L 
Sbjct: 939  CLSNNNLGNEGVTLLCRSLRLPHCGLQRLMLNHCNLDTAGCGFLALTLLGNARLMHLSLS 998

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G++ L   +      L  L++ +  ++A     +A  I   + L  ++L  N 
Sbjct: 999  MNPLEDSGVKLLCEVMREPSCHLRDLELVSCRLTAACCESLAYVIARSRYLRSLDLSENA 1058

Query: 399  IGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +GD G   + + LKQ R++   + L    + S     ++  L  N  + SL+L  N    
Sbjct: 1059 VGDVGVAALCEGLKQRRSVLRRLGLKSCGLTSGCCEELSLALSCNRQLASLNLVQNDFSP 1118

Query: 458  DGAKAL 463
             G + L
Sbjct: 1119 TGMRKL 1124



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 161/394 (40%), Gaps = 43/394 (10%)

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNN 283
            + G  + DE  +  C +L  +  +++L L S  L +   K +   L+  +  ++ L L N
Sbjct: 742  MQGKTLIDEQWENFCSVLGTHPHLQQLDLGSSVLTERALKTLCAKLRPPACQIQKLRLRN 801

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE-LHLH---- 338
              +   G   L   L+ N  +RSL L   +          + L+  + + E L L     
Sbjct: 802  TQMT-PGLQHLWRTLIANRNLRSLSLGSAHLKEEDVRMACEALKHPRCMLESLRLDCCGL 860

Query: 339  ------------------------GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
                                    GN + DEG++AL   L   +  L  L + +  ++A 
Sbjct: 861  TLACYLKISKILTTSRSLSSLSLAGNEVTDEGVKALGEVLKVSQCTLQKLTLQDCGLTAT 920

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            G   +A  +    SL  + L  N++G+EG   +  +L+     +  + L   N+ + G  
Sbjct: 921  GCQSLASALITNHSLTHLCLSNNNLGNEGVTLLCRSLRLPHCGLQRLMLNHCNLDTAGCG 980

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVA 492
             +A  L  N+ +  L L+ NP+   G K L EV++    ++  L+L  C++ A+  E +A
Sbjct: 981  FLALTLLGNARLMHLSLSMNPLEDSGVKLLCEVMREPSCHLRDLELVSCRLTAACCESLA 1040

Query: 493  DMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAI--YSLKHMLFYSLCINYLQGAK 549
             ++  +  +  LDL  N + D  V + C GL    S +    LK     S C   L    
Sbjct: 1041 YVIARSRYLRSLDLSENAVGDVGVAALCEGLKQRRSVLRRLGLKSCGLTSGCCEELS--- 1097

Query: 550  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
             LA S    N  L S++L  N+    G   +  A
Sbjct: 1098 -LALS---CNRQLASLNLVQNDFSPTGMRKLCSA 1127


>gi|115313283|gb|AAI24388.1| Si:ch211-234g24.1 protein [Danio rerio]
          Length = 527

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 158/348 (45%), Gaps = 21/348 (6%)

Query: 147 FRESKQTLN--EFAKELRAFSSV-DMSGRNFGDEGLFFLAESLGYN--QTAEE------- 194
           +R++ Q LN     K L+    + D++ RN   E L    E L Y   ++ EE       
Sbjct: 116 YRQACQKLNCKPIPKVLKQTQDLKDLTQRN---ECLDLKGEKLDYKSCESLEEIFKRVQF 172

Query: 195 --VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP-IGDEGVKCLCDILVDNAGVERL 251
             V      +   G  A   +++   +   LN+S N  IG  G +    ++     ++ L
Sbjct: 173 KLVDLEQTNLDEDGASALFDMIEYYESATHLNISNNKHIGTRGWQAAAHMMRKTNSLQYL 232

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
              +  L D  A  +A  L+ +S L VL L N+ I       LA AL  N  +R L+L  
Sbjct: 233 DARNTPLLDHSAPFVARALRISSSLTVLHLENSGISGRPLMLLATALKMNMNLRELYLAE 292

Query: 312 NYGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N    L  +A L   L+ N +++ L L  N I D G+  +  GL  ++  L  L + NN 
Sbjct: 293 NKLNGLQDSAQLGNLLKFNYNIQILDLRNNHILDSGLAYVCEGLKEQRKGLVTLVLWNNQ 352

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           ++  G  ++A  +   +SL  +NL  N +G+EG  K+ D L  NR+I  + L    +  +
Sbjct: 353 LTHNGMGYLAAALPFTQSLETLNLGHNAVGNEGVHKLKDGLISNRSILRLGLASTKLSCE 412

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           GA AIA  + ++  +  LD+  N I   G  ALS  L F  N + L+L
Sbjct: 413 GAVAIAEFIAESPRLLRLDMRENEIKTGGLMALS--LAFKVNTSLLRL 458



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 140/303 (46%), Gaps = 4/303 (1%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS-VDLRDEGAKAIAELLKNNSIL 276
           +  K ++L    + ++G   L D++        L +S+   +   G +A A +++  + L
Sbjct: 170 VQFKLVDLEQTNLDEDGASALFDMIEYYESATHLNISNNKHIGTRGWQAAAHMMRKTNSL 229

Query: 277 RVLELNNN-MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+  N  ++D+S    +A AL  +S++  LHL  +         LA  L+ N +LREL
Sbjct: 230 QYLDARNTPLLDHSA-PFVARALRISSSLTVLHLENSGISGRPLMLLATALKMNMNLREL 288

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC-KSLLWINL 394
           +L  N +      A +  L      + +LD+ NN I   G  +V E +K   K L+ + L
Sbjct: 289 YLAENKLNGLQDSAQLGNLLKFNYNIQILDLRNNHILDSGLAYVCEGLKEQRKGLVTLVL 348

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N +   G   +A AL   +++ T++LG N + ++G   +   L  N  I  L LA   
Sbjct: 349 WNNQLTHNGMGYLAAALPFTQSLETLNLGHNAVGNEGVHKLKDGLISNRSILRLGLASTK 408

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +  +GA A++E +     +  L +   +I   G   ++   + N ++  LDL     ++ 
Sbjct: 409 LSCEGAVAIAEFIAESPRLLRLDMRENEIKTGGLMALSLAFKVNTSLLRLDLDREPKKET 468

Query: 515 VCS 517
           V S
Sbjct: 469 VKS 471



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 1/145 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D+   +  D GL ++ E L   +     +    N +T  G+      L    +L+TLNL
Sbjct: 317 LDLRNNHILDSGLAYVCEGLKEQRKGLVTLVLWNNQLTHNGMGYLAAALPFTQSLETLNL 376

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N +G+EGV  L D L+ N  + RL L+S  L  EGA AIAE +  +  L  L++  N 
Sbjct: 377 GHNAVGNEGVHKLKDGLISNRSILRLGLASTKLSCEGAVAIAEFIAESPRLLRLDMRENE 436

Query: 286 IDYSGFTSLAEALLENSTIRSLHLN 310
           I   G  +L+ A   N+++  L L+
Sbjct: 437 IKTGGLMALSLAFKVNTSLLRLDLD 461



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 143/336 (42%), Gaps = 21/336 (6%)

Query: 264 KAIAELLKNNSILR-------VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
           K I ++LK    L+        L+L    +DY    SL E + +    + + L       
Sbjct: 126 KPIPKVLKQTQDLKDLTQRNECLDLKGEKLDYKSCESLEE-IFKRVQFKLVDLEQTNLDE 184

Query: 317 LGANALAKGLEGNKSLRELHLHGNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            GA+AL   +E  +S   L++  N  IG  G +A  + +  +   L  LD  N  +    
Sbjct: 185 DGASALFDMIEYYESATHLNISNNKHIGTRGWQA-AAHMMRKTNSLQYLDARNTPLLDHS 243

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA- 434
           A  VA  ++   SL  ++L  + I       +A ALK N  +  + L  N ++    SA 
Sbjct: 244 APFVARALRISSSLTVLHLENSGISGRPLMLLATALKMNMNLRELYLAENKLNGLQDSAQ 303

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVAD 493
           +  +LK N  I  LDL  N I   G   + E LK     + TL L   Q+  +G  ++A 
Sbjct: 304 LGNLLKFNYNIQILDLRNNHILDSGLAYVCEGLKEQRKGLVTLVLWNNQLTHNGMGYLAA 363

Query: 494 MLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCL 551
            L +  ++  L+L  N +      G  G+      + S + +L   L    L  +GA  +
Sbjct: 364 ALPFTQSLETLNLGHNAV------GNEGVHKLKDGLISNRSILRLGLASTKLSCEGAVAI 417

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           A+ F   +  L  +D+  NEI+  G  A++ A K N
Sbjct: 418 AE-FIAESPRLLRLDMRENEIKTGGLMALSLAFKVN 452



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 12/198 (6%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP-IGADGAKALSEVLKFHGNINTLKL 478
           +DL   N+   GASA+  +++     T L+++ N  IG  G +A + +++   ++  L  
Sbjct: 175 VDLEQTNLDEDGASALFDMIEYYESATHLNISNNKHIGTRGWQAAAHMMRKTNSLQYLDA 234

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI---YSLKHM 535
               +    A FVA  LR ++++++L L  +G+     SG   L    +A+    +L+ +
Sbjct: 235 RNTPLLDHSAPFVARALRISSSLTVLHLENSGI-----SG-RPLMLLATALKMNMNLREL 288

Query: 536 LFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
                 +N LQ +  L    K  N  +  +DL  N I D G   + + LK      VT L
Sbjct: 289 YLAENKLNGLQDSAQLGNLLKF-NYNIQILDLRNNHILDSGLAYVCEGLKEQRKGLVT-L 346

Query: 596 NLANNFLTKFGQSALTDA 613
            L NN LT  G   L  A
Sbjct: 347 VLWNNQLTHNGMGYLAAA 364


>gi|118349133|ref|XP_001033443.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89287792|gb|EAR85780.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 911

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 41/328 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKAFDGVLQSNIAL 220
           +D+S  N   EG     ESL  NQ+   +  +       N +   G +A +  L+ N  L
Sbjct: 333 LDLSSNNISPEGFQIFFESLLGNQSLISLDISCKEGLNRNKLGLQGSRALEAFLKQNKTL 392

Query: 221 KTLNLSGNPIGDEGVKCLCD--------ILVD-------------------NAGVERLQL 253
           + LN+SG  + ++G  C+ +        + +D                   N+ +  L +
Sbjct: 393 QILNISGTSMTEDGSICVLNGLQGNKSIVSIDFSCNELNSAFMQEAVLKLCNSNIIELNM 452

Query: 254 SSVDLRDEGAKAIAELLKNNSIL---RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++  + D G +++++++  NS     + + LNNN I  SG +   EA+  N T++ ++L+
Sbjct: 453 ANNQIGDPGIESMSQMVGVNSKFYKFQSINLNNNQITSSGVSRFFEAMHHNQTLKKIYLD 512

Query: 311 GN--YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            N  YG ++  NA+   L  N ++  L L+   +   G  A+  GL  R   L  L + +
Sbjct: 513 QNNFYGSSI--NAILNYLWENNTIEVLSLNQTDLDLVGGDAVGIGLQ-RNLSLKELYVRD 569

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N +   GA  +AE IK C++L  I+L M  I D+    IA+ LK N+ ++ I L  N++H
Sbjct: 570 NKLKDVGAKQIAEGIKLCETLTVIDLSMCGISDDTGMLIAEGLKVNKNMSAIYLRENSLH 629

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIG 456
                 +    K+N  +  +D+  NPI 
Sbjct: 630 DYTGIVLVEAAKENQNLQKIDIIRNPIS 657



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 149/328 (45%), Gaps = 11/328 (3%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++F  N ++  G       L+ N  +  L+LS N I  EG +   + L+ N  +  L +S
Sbjct: 305 LNFQKNILSNTGAVIVSEALKYNFNIIHLDLSSNNISPEGFQIFFESLLGNQSLISLDIS 364

Query: 255 SVD------LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             +      L  +G++A+   LK N  L++L ++   +   G   +   L  N +I S+ 
Sbjct: 365 CKEGLNRNKLGLQGSRALEAFLKQNKTLQILNISGTSMTEDGSICVLNGLQGNKSIVSID 424

Query: 309 LNGN-YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL--MSGLSSRKGKLAVLD 365
            + N    A    A+ K    N  + EL++  N IGD GI ++  M G++S+  K   ++
Sbjct: 425 FSCNELNSAFMQEAVLKLCNSN--IIELNMANNQIGDPGIESMSQMVGVNSKFYKFQSIN 482

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + NN I++ G     E + + ++L  I L  N+        I + L +N TI  + L   
Sbjct: 483 LNNNQITSSGVSRFFEAMHHNQTLKKIYLDQNNFYGSSINAILNYLWENNTIEVLSLNQT 542

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           ++   G  A+   L+ N  +  L +  N +   GAK ++E +K    +  + L  C I  
Sbjct: 543 DLDLVGGDAVGIGLQRNLSLKELYVRDNKLKDVGAKQIAEGIKLCETLTVIDLSMCGISD 602

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRD 513
                +A+ L+ N  +S + LR N L D
Sbjct: 603 DTGMLIAEGLKVNKNMSAIYLRENSLHD 630



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 192/435 (44%), Gaps = 56/435 (12%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   ++ N A +   L    +G +    L +I++ N    RL      L + GA  ++E 
Sbjct: 264 FIEKIKKNCAKRQFILKECGLGIDSAHVLGNIIISNNHFVRLNFQKNILSNTGAVIVSEA 323

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH------LNGNYGGALGANALA 323
           LK N  +  L+L++N I   GF    E+LL N ++ SL       LN N  G  G+ AL 
Sbjct: 324 LKYNFNIIHLDLSSNNISPEGFQIFFESLLGNQSLISLDISCKEGLNRNKLGLQGSRALE 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK+L+ L++ G S+ ++G   +++GL   K  +  +D   N +++  AF     +
Sbjct: 384 AFLKQNKTLQILNISGTSMTEDGSICVLNGLQGNKS-IVSIDFSCNELNS--AFMQEAVL 440

Query: 384 KNCKS-LLWINLYMNDIGDEGAEKIA-------------------------------DAL 411
           K C S ++ +N+  N IGD G E ++                               +A+
Sbjct: 441 KLCNSNIIELNMANNQIGDPGIESMSQMVGVNSKFYKFQSINLNNNQITSSGVSRFFEAM 500

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
             N+T+  I L  NN +    +AI   L +N+ I  L L    +   G  A+   L+ + 
Sbjct: 501 HHNQTLKKIYLDQNNFYGSSINAILNYLWENNTIEVLSLNQTDLDLVGGDAVGIGLQRNL 560

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE----VCSGCNGLSFFHS 527
           ++  L +   ++   GA+ +A+ ++   T++++DL   G+ D+    +  G   ++   S
Sbjct: 561 SLKELYVRDNKLKDVGAKQIAEGIKLCETLTVIDLSMCGISDDTGMLIAEGL-KVNKNMS 619

Query: 528 AIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           AIY  ++ L     I  ++ AK         N+ L  ID+  N I       I + L  N
Sbjct: 620 AIYLRENSLHDYTGIVLVEAAK--------ENQNLQKIDIIRNPISYRFQEEIQKCLDVN 671

Query: 588 EDVAVTSLNLANNFL 602
            D+     NL  N++
Sbjct: 672 IDLYKK--NLVPNYI 684



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 98/254 (38%), Gaps = 31/254 (12%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF------------- 210
           F S++++       G+    E++ +NQT +++    N    + I A              
Sbjct: 478 FQSINLNNNQITSSGVSRFFEAMHHNQTLKKIYLDQNNFYGSSINAILNYLWENNTIEVL 537

Query: 211 ------------DGV---LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
                       D V   LQ N++LK L +  N + D G K + + +     +  + LS 
Sbjct: 538 SLNQTDLDLVGGDAVGIGLQRNLSLKELYVRDNKLKDVGAKQIAEGIKLCETLTVIDLSM 597

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMI-DYSGFTSLAEALLENSTIRSLHLNGNYG 314
             + D+    IAE LK N  +  + L  N + DY+G   L EA  EN  ++ + +  N  
Sbjct: 598 CGISDDTGMLIAEGLKVNKNMSAIYLRENSLHDYTGIV-LVEAAKENQNLQKIDIIRNPI 656

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISA 373
                  + K L+ N  L + +L  N I   E +R    G      +  +LD     +  
Sbjct: 657 SYRFQEEIQKCLDVNIDLYKKNLVPNYINTMEELRIFEKGKYDDYQRQQMLDKQQREVQK 716

Query: 374 KGAFHVAEYIKNCK 387
                 A+Y +  K
Sbjct: 717 LYDEKKAQYERESK 730


>gi|149604235|ref|XP_001519938.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2-like [Ornithorhynchus anatinus]
          Length = 1017

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 4/267 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            VE ++L+   +      A+A +L+       L+L+ N +   G   L   L      R+L
Sbjct: 741  VEHVKLTYCGVGPAECAALAFVLRFLRRPVSLQLDYNSVGDVGLEQLLPCL---KVCRAL 797

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G + L        SL++L L  N + D+   +L   L  ++  LA L +G
Sbjct: 798  YLRDNNISDHGISKLVDQALLCDSLQKLALFNNKLTDDSAHSLAKLLKYKENFLA-LRLG 856

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++ L+ N +G+EGA+ +ADAL  +R++  + L GNN+
Sbjct: 857  NNHITAVGAKVLAEGLEGNHSLQFLGLWGNTVGEEGAQALADALHGHRSLKWLSLVGNNV 916

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N V+  L L  N +      +L+E LK + ++  LKL    I   G
Sbjct: 917  GSVGARALALMLGKNVVLEELCLEENRLNDQDVCSLAEGLKKNSSLKVLKLSNNNITYQG 976

Query: 488  AEFVADMLRYNNTISILDLRANGLRDE 514
               +   L+ N+T+  + LR N    E
Sbjct: 977  VVSLLQTLKKNDTLKSIWLRGNTFTPE 1003



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 143/305 (46%), Gaps = 9/305 (2%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            L AF  +  S     DEGL   A         E V     G+  A   A   VL+     
Sbjct: 713  LPAFLWLIKSLYEMQDEGL---ARRAVRGFEVEHVKLTYCGVGPAECAALAFVLRFLRRP 769

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVL 279
             +L L  N +GD G++ L   L        L L   ++ D G +K + + L  +S+ ++ 
Sbjct: 770  VSLQLDYNSVGDVGLEQLLPCL---KVCRALYLRDNNISDHGISKLVDQALLCDSLQKLA 826

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
              NN + D S   SLA+ L       +L L  N+  A+GA  LA+GLEGN SL+ L L G
Sbjct: 827  LFNNKLTDDSAH-SLAKLLKYKENFLALRLGNNHITAVGAKVLAEGLEGNHSLQFLGLWG 885

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N++G+EG +AL   L   +  L  L +  N++ + GA  +A  +     L  + L  N +
Sbjct: 886  NTVGEEGAQALADALHGHRS-LKWLSLVGNNVGSVGARALALMLGKNVVLEELCLEENRL 944

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             D+    +A+ LK+N ++  + L  NNI  +G  ++ + LK N  + S+ L  N    + 
Sbjct: 945  NDQDVCSLAEGLKKNSSLKVLKLSNNNITYQGVVSLLQTLKKNDTLKSIWLRGNTFTPEE 1004

Query: 460  AKALS 464
             ++LS
Sbjct: 1005 IESLS 1009



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 89/174 (51%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL  +S  +L +  K    F ++ +   +    G   LAE L  N + + +   
Sbjct: 825 LALFNNKLTDDSAHSLAKLLKYKENFLALRLGNNHITAVGAKVLAEGLEGNHSLQFLGLW 884

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A    L  + +LK L+L GN +G  G + L  +L  N  +E L L    L
Sbjct: 885 GNTVGEEGAQALADALHGHRSLKWLSLVGNNVGSVGARALALMLGKNVVLEELCLEENRL 944

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            D+   ++AE LK NS L+VL+L+NN I Y G  SL + L +N T++S+ L GN
Sbjct: 945 NDQDVCSLAEGLKKNSSLKVLKLSNNNITYQGVVSLLQTLKKNDTLKSIWLRGN 998


>gi|399498098|emb|CCG20377.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489


>gi|399497848|emb|CCG20252.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMYSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|432908136|ref|XP_004077771.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Oryzias latipes]
          Length = 986

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 125/243 (51%), Gaps = 5/243 (2%)

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           L  + ++LR+   NNN+ DY G   L  +    + +R   L+ N         LA+ L  
Sbjct: 732 LQHHRTLLRLDMDNNNISDY-GVKQLRPSFSRMTVVR---LSVNSLSDSSIEILAEELCK 787

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           +K ++ L L+ N+I D G + L++ +     KLAVL +G N I+  G  ++A  I+   S
Sbjct: 788 HKIVQILGLYNNNITDVGAK-LVAHIIEECPKLAVLKLGKNKITGVGGRYLALAIQKSTS 846

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           +  + ++ N IGDEGAE  A AL+ + T+T + L  N I S+G   +A  L++NSV+   
Sbjct: 847 IFDVGMWGNSIGDEGAEAFAKALRNHPTLTNLSLAANGITSRGGRILAEGLRENSVLRIF 906

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L  N +G D A  L+E+++ +  ++ L L    +   G   +A+ L  N     + ++ 
Sbjct: 907 WLVENKLGDDAAPTLAELVRANTGLSHLWLINNMLTVVGIRRLAEALAVNTKFKEICVKG 966

Query: 509 NGL 511
           N +
Sbjct: 967 NQI 969



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 19/281 (6%)

Query: 187 GYNQTAEEVSFAANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEG 234
           G  Q A+     A GIT   IK            A + VLQ +  L  L++  N I D G
Sbjct: 696 GSKQIAQ---MTAKGITPYFIKLGYCNVYSGDCTALNFVLQHHRTLLRLDMDNNNISDYG 752

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           VK L         V RL ++S  L D   + +AE L  + I+++L L NN I   G   +
Sbjct: 753 VKQLRPSF-SRMTVVRLSVNS--LSDSSIEILAEELCKHKIVQILGLYNNNITDVGAKLV 809

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A  + E   +  L L  N    +G   LA  ++ + S+ ++ + GNSIGDEG  A    L
Sbjct: 810 AHIIEECPKLAVLKLGKNKITGVGGRYLALAIQKSTSIFDVGMWGNSIGDEGAEAFAKAL 869

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
            +    L  L +  N I+++G   +AE ++    L    L  N +GD+ A  +A+ ++ N
Sbjct: 870 RNHP-TLTNLSLAANGITSRGGRILAEGLRENSVLRIFWLVENKLGDDAAPTLAELVRAN 928

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             ++ + L  N +   G   +A  L  N+    + +  N I
Sbjct: 929 TGLSHLWLINNMLTVVGIRRLAEALAVNTKFKEICVKGNQI 969



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 38/250 (15%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+ NN+IS  G   V +   +   +  + L +N + D   E +A+ L +++ +  + L 
Sbjct: 741 LDMDNNNISDYG---VKQLRPSFSRMTVVRLSVNSLSDSSIEILAEELCKHKIVQILGLY 797

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            NNI   GA  +A ++++   +  L L  N I   G + L+  ++   +I  + +    I
Sbjct: 798 NNNITDVGAKLVAHIIEECPKLAVLKLGKNKITGVGGRYLALAIQKSTSIFDVGMWGNSI 857

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G  GAE  A  LR + T++ L L ANG+                                
Sbjct: 858 GDEGAEAFAKALRNHPTLTNLSLAANGITS------------------------------ 887

Query: 544 YLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
             +G + LA+  +  N  L    L  N++ DD A  +A+ ++AN    ++ L L NN LT
Sbjct: 888 --RGGRILAEGLRE-NSVLRIFWLVENKLGDDAAPTLAELVRAN--TGLSHLWLINNMLT 942

Query: 604 KFGQSALTDA 613
             G   L +A
Sbjct: 943 VVGIRRLAEA 952



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 5/219 (2%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            K+LR      + V +S  +  D  +  LAE L  ++  + +    N IT  G K    +
Sbjct: 753 VKQLRPSFSRMTVVRLSVNSLSDSSIEILAEELCKHKIVQILGLYNNNITDVGAKLVAHI 812

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++    L  L L  N I   G + L   +  +  +  + +    + DEGA+A A+ L+N+
Sbjct: 813 IEECPKLAVLKLGKNKITGVGGRYLALAIQKSTSIFDVGMWGNSIGDEGAEAFAKALRNH 872

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L  N I   G   LAE L ENS +R   L  N  G   A  LA+ +  N  L 
Sbjct: 873 PTLTNLSLAANGITSRGGRILAEGLRENSVLRIFWLVENKLGDDAAPTLAELVRANTGLS 932

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            L L  N +   GIR L   L+    K   + +  N IS
Sbjct: 933 HLWLINNMLTVVGIRRLAEALAVNT-KFKEICVKGNQIS 970



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 3/196 (1%)

Query: 150 SKQTLNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           S  ++   A+EL     V + G    N  D G   +A  +        +    N IT  G
Sbjct: 774 SDSSIEILAEELCKHKIVQILGLYNNNITDVGAKLVAHIIEECPKLAVLKLGKNKITGVG 833

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +     +Q + ++  + + GN IGDEG +     L ++  +  L L++  +   G + +
Sbjct: 834 GRYLALAIQKSTSIFDVGMWGNSIGDEGAEAFAKALRNHPTLTNLSLAANGITSRGGRIL 893

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE L+ NS+LR+  L  N +      +LAE +  N+ +  L L  N    +G   LA+ L
Sbjct: 894 AEGLRENSVLRIFWLVENKLGDDAAPTLAELVRANTGLSHLWLINNMLTVVGIRRLAEAL 953

Query: 327 EGNKSLRELHLHGNSI 342
             N   +E+ + GN I
Sbjct: 954 AVNTKFKEICVKGNQI 969



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 35/268 (13%)

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           +R+ M GL + KG     D G          HV        + LW+   +  I + G+++
Sbjct: 661 VRSHMKGLPTYKG-----DDGTK-------VHVL------PNFLWM---VRCIFETGSKQ 699

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           IA    +  T   I LG  N++S   +A+  VL+ +  +  LD+  N I   G K L   
Sbjct: 700 IAQMTAKGITPYFIKLGYCNVYSGDCTALNFVLQHHRTLLRLDMDNNNISDYGVKQLRPS 759

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
                 +  ++L    +  S  E +A+ L  +  + IL L  N + D       G     
Sbjct: 760 F---SRMTVVRLSVNSLSDSSIEILAEELCKHKIVQILGLYNNNITDV------GAKLVA 810

Query: 527 SAIYSLKHMLFYSLCINYLQGA--KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
             I     +    L  N + G   + LA + +  + ++  + +  N I D+GA A A+AL
Sbjct: 811 HIIEECPKLAVLKLGKNKITGVGGRYLALAIQ-KSTSIFDVGMWGNSIGDEGAEAFAKAL 869

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTD 612
           + +    +T+L+LA N +T  G   L +
Sbjct: 870 RNHP--TLTNLSLAANGITSRGGRILAE 895


>gi|326678363|ref|XP_697912.5| PREDICTED: hypothetical protein LOC569436 [Danio rerio]
          Length = 3144

 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 171/372 (45%), Gaps = 15/372 (4%)

Query: 224  NLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLEL 281
            +LS N + D GVK L + L +N   +E+L LS   + +EG KA+A  L++N S L  L+L
Sbjct: 2700 DLSNNNLQDSGVKQLWNGLKNNNCTLEKLNLSDCSISEEGYKALASALRSNPSHLIELDL 2759

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS--LRELHLHG 339
              N    +G   L E LL++   +   L      A  A     GL G     +REL L  
Sbjct: 2760 RGNYPGQTGVKELTE-LLQDRYTKLKTLRFLSPDAEKACKYVPGLVGKDPFLVRELSLRD 2818

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMND 398
              +GD  I  L + L  +  KL  + + N SI+ +    ++  +K N   L  +NL  N 
Sbjct: 2819 QKLGDTNINYLAALLQDKHCKLNTIQLLNCSITEEQCVFLSSALKSNPSHLRELNLSGNK 2878

Query: 399  IGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIG 456
            I + G   + D L+ +   +  + L   ++     SA+   LK N S +  L+L+ N I 
Sbjct: 2879 IRNTGVNLLCDILEDSHCKLERLSLCSCSLTDDCCSAVTSALKSNPSHLRELNLSGNQIE 2938

Query: 457  ADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNN-TISILDLRANGLRDE 514
              G   L E+LK  H  + TL+L  C +     + +A  L+ N   +  LDL  N L D 
Sbjct: 2939 NTGVNLLCELLKDSHCKLETLRLRCCSLTDEDYKDLASALKENPLHLRELDLSENKLGD- 2997

Query: 515  VCSGCNGLS-FFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
              SG   LS    +  + L+ +  Y+  I   Q  K L  + K+    L  +DL+ NEI+
Sbjct: 2998 --SGMEKLSDLLKNLQHKLEKLHLYNCSITEKQ-CKSLTSALKLNPSHLRELDLSGNEIK 3054

Query: 574  DDGAFAIAQALK 585
            + G   +   LK
Sbjct: 3055 NKGVNLLCDVLK 3066



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 142/352 (40%), Gaps = 66/352 (18%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIA-LKTLN 224
            + +  +  GD  + +LA  L         +      IT          L+SN + L+ LN
Sbjct: 2814 LSLRDQKLGDTNINYLAALLQDKHCKLNTIQLLNCSITEEQCVFLSSALKSNPSHLRELN 2873

Query: 225  LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELN 282
            LSGN I + GV  LCDIL D +  +ERL L S  L D+   A+   LK+N S LR L L+
Sbjct: 2874 LSGNKIRNTGVNLLCDILEDSHCKLERLSLCSCSLTDDCCSAVTSALKSNPSHLRELNLS 2933

Query: 283  NNMIDYSG-----------------------------FTSLAEALLENS-TIRSLHLNGN 312
             N I+ +G                             +  LA AL EN   +R L L+ N
Sbjct: 2934 GNQIENTGVNLLCELLKDSHCKLETLRLRCCSLTDEDYKDLASALKENPLHLRELDLSEN 2993

Query: 313  YGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
              G  G   L+  L+     L +LHL+  SI ++  ++L S L      L  LD+  N I
Sbjct: 2994 KLGDSGMEKLSDLLKNLQHKLEKLHLYNCSITEKQCKSLTSALKLNPSHLRELDLSGNEI 3053

Query: 372  SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              KG   + + +K+    L   L ++D G      +   L   + +              
Sbjct: 3054 KNKGVNLLCDVLKDSHCKLET-LSLHDCGITDVSSLTQCLMNTKAL-------------- 3098

Query: 432  ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
                         +  LDL+ N +G D  K LSE++K    ++  KL   QI
Sbjct: 3099 -----------QFLKELDLSKNKLG-DSKKELSEMIK----VSDCKLRRAQI 3134



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 188/410 (45%), Gaps = 29/410 (7%)

Query: 195  VSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQ 252
            ++  ++ IT          L SN + LK L+LS   +GD G+K    +  +N   +E+L 
Sbjct: 1868 LTLKSSRITEDDCCVLISALNSNPSNLKDLDLSKTNLGDSGMKIFSTLFENNKCKLEKLN 1927

Query: 253  LSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENST--IRSLHL 309
            L+SV + + G  A+A    +N   L+ L+L+ N +  SG T ++ ALL+NS   ++ L L
Sbjct: 1928 LNSVSIGEAGCAALASAFNSNPTKLKELDLSRNQLGDSGVTQIS-ALLQNSQCALQILSL 1986

Query: 310  NGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            +       G  ALA  L+ N S L EL L GN  G+ G++ L   L +    L +  + +
Sbjct: 1987 SDCSISEEGYKALASALKLNPSHLIELDLRGNDPGESGVKELFDSLQNLNRDLQLRFLSS 2046

Query: 369  NSISAKGAFHVAEYIKNC---KSLLWINLYMND--IGDEGAEKIADALKQNRT-ITTIDL 422
                   A +V +++K       LL   L +ND  + D   +K+A  L+     I+T+  
Sbjct: 2047 E------ADNVCQFVKRIVGENPLLLKELNLNDRQLRDTTVDKLAVLLQDKHCKISTLTF 2100

Query: 423  GGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPI-GADGAKALSEVLKFHGNINTLKLGW 480
              ++   +    + +VL  + ++ T LDL  + +   DG K  + ++  H  +  +K+  
Sbjct: 2101 LKSSGAEEACDHLTKVLGISPLLLTELDLNEDKLKDLDGEKLSALLMDSHSKVEKMKMNN 2160

Query: 481  CQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYS 539
            C++       +A +L     +  L+L  + L D  V   C GL    + +  LK +L  S
Sbjct: 2161 CELTEKSCSVLATVLSSKTILKELNLNNSRLLDSGVRVICEGLK---NIVCELK-ILNLS 2216

Query: 540  LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 589
             C    +G K LA + +     L  +DL  N   D G   + + L   +D
Sbjct: 2217 DCSISEEGYKALASALRSNPSHLIELDLRRN---DPGESGVKELLDVQQD 2263



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 134/306 (43%), Gaps = 41/306 (13%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIG 231
            N    G+  L+++L  N   E+++    GI+  G +A    L+S ++ L  L+L GN  G
Sbjct: 1733 NLQGSGVKLLSDNLKDNCKLEKLNLLDCGISEEGYEALATALESKLSHLTELDLRGNDPG 1792

Query: 232  DEGVKCLCDILVDNAGVER-LQLSSVDLRDEGA--------------------------- 263
            + GVK L D L     + R LQL  +    E A                           
Sbjct: 1793 ESGVKKLLDSL---QNLNRDLQLRFLHPDAEKAFSDLTHILNENLLLLRKLNLSEHYLVA 1849

Query: 264  --KAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGA 319
              K +A LL +    +  L L ++ I       L  AL  N S ++ L L+    G  G 
Sbjct: 1850 KLKELAPLLADKHCKINTLTLKSSRITEDDCCVLISALNSNPSNLKDLDLSKTNLGDSGM 1909

Query: 320  NALAKGLEGNK-SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
               +   E NK  L +L+L+  SIG+ G  AL S  +S   KL  LD+  N +   G   
Sbjct: 1910 KIFSTLFENNKCKLEKLNLNSVSIGEAGCAALASAFNSNPTKLKELDLSRNQLGDSGVTQ 1969

Query: 379  VAEYIKNCKSLLWINLYMND--IGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
            ++  ++N +  L I L ++D  I +EG + +A ALK N + +  +DL GN+    G   +
Sbjct: 1970 ISALLQNSQCALQI-LSLSDCSISEEGYKALASALKLNPSHLIELDLRGNDPGESGVKEL 2028

Query: 436  ARVLKD 441
               L++
Sbjct: 2029 FDSLQN 2034



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 150/374 (40%), Gaps = 72/374 (19%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIA-LK 221
               +D+S    GD G+  ++  L  +Q A ++ S +   I+  G KA    L+ N + L 
Sbjct: 1952 LKELDLSRNQLGDSGVTQISALLQNSQCALQILSLSDCSISEEGYKALASALKLNPSHLI 2011

Query: 222  TLNLSGNPIGDEGVKCLCDIL---------------VDNAG-------------VERLQL 253
             L+L GN  G+ GVK L D L                DN               ++ L L
Sbjct: 2012 ELDLRGNDPGESGVKELFDSLQNLNRDLQLRFLSSEADNVCQFVKRIVGENPLLLKELNL 2071

Query: 254  SSVDLRDEGAKAIAELLKNNS------------------------------ILRVLELNN 283
            +   LRD     +A LL++                                +L  L+LN 
Sbjct: 2072 NDRQLRDTTVDKLAVLLQDKHCKISTLTFLKSSGAEEACDHLTKVLGISPLLLTELDLNE 2131

Query: 284  NMI-DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            + + D  G    A  +  +S +  + +N         + LA  L     L+EL+L+ + +
Sbjct: 2132 DKLKDLDGEKLSALLMDSHSKVEKMKMNNCELTEKSCSVLATVLSSKTILKELNLNNSRL 2191

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGD 401
             D G+R +  GL +   +L +L++ + SIS +G   +A  ++ N   L+ ++L  ND G+
Sbjct: 2192 LDSGVRVICEGLKNIVCELKILNLSDCSISEEGYKALASALRSNPSHLIELDLRRNDPGE 2251

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV------ITSLDLAYNPI 455
             G +++ D  +   TI  +    + +       + R++  N +      ++ L L +N +
Sbjct: 2252 SGVKELLDVQQDKLTIKFLSPAADEV----CQFVTRIVGKNPLLQKELKLSELTLDFNKV 2307

Query: 456  GADGAKALSEVLKF 469
                A  L +  K 
Sbjct: 2308 SQLAALVLDKHCKL 2321



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 197/470 (41%), Gaps = 38/470 (8%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
            S + + EF  EL+ F           DE LF L E +   + ++     A  +T     +
Sbjct: 1609 SDEEMEEF--ELQKFKK--------SDECLFRLLEVV---KNSKRALLNACELTNESCCS 1655

Query: 210  FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGA-KAIA 267
                L S   L  LN+S N + D GV+ LC  L      +E L LS   + ++      +
Sbjct: 1656 MSNALSSENNLIELNMSNNDLQDSGVQQLCSGLKSTMCKLEILGLSKCGITEKTCSALAS 1715

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L  ++S L+ L+L+NN +  SG   L++ L +N  +  L+L        G  ALA  LE
Sbjct: 1716 ALSSDSSSLKDLDLSNNNLQGSGVKLLSDNLKDNCKLEKLNLLDCGISEEGYEALATALE 1775

Query: 328  GNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
               S L EL L GN  G+ G++ L+  L +    L +  +  +   A+ AF    +I N 
Sbjct: 1776 SKLSHLTELDLRGNDPGESGVKKLLDSLQNLNRDLQLRFLHPD---AEKAFSDLTHILNE 1832

Query: 387  KSLLWINL-----YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
              LL   L     Y+     E A  +AD   ++  I T+ L  + I       +   L  
Sbjct: 1833 NLLLLRKLNLSEHYLVAKLKELAPLLAD---KHCKINTLTLKSSRITEDDCCVLISALNS 1889

Query: 442  N-SVITSLDLAYNPIGADGAKALSEVLKFHGN---INTLKLGWCQIGASGAEFVADMLRY 497
            N S +  LDL+   +G  G K  S +  F  N   +  L L    IG +G   +A     
Sbjct: 1890 NPSNLKDLDLSKTNLGDSGMKIFSTL--FENNKCKLEKLNLNSVSIGEAGCAALASAFNS 1947

Query: 498  NNT-ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
            N T +  LDL  N L D   SG   +S           +L  S C    +G K LA + K
Sbjct: 1948 NPTKLKELDLSRNQLGD---SGVTQISALLQNSQCALQILSLSDCSISEEGYKALASALK 2004

Query: 557  VVNEALTSIDLAFNEIRDDGAFAIAQALK-ANEDVAVTSLNLANNFLTKF 605
            +    L  +DL  N+  + G   +  +L+  N D+ +  L+   + + +F
Sbjct: 2005 LNPSHLIELDLRGNDPGESGVKELFDSLQNLNRDLQLRFLSSEADNVCQF 2054



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 121/531 (22%), Positives = 209/531 (39%), Gaps = 84/531 (15%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK-TLN 224
            +D+SG    D G+  +   L   Q   E+V  +   ITA G KA    L+SN + +  L+
Sbjct: 2469 LDLSGNKLADSGMKNICCLLQNVQCRLEKVKLSRCNITAEGYKALASALKSNPSHQIKLD 2528

Query: 225  LSGNPIGDEGVKCL-------------------------CDILVDNAGVERLQLSSVDLR 259
            L+GN  G  G+                             D L D  G   L L+ +DL 
Sbjct: 2529 LTGNYPGPSGLSWFFKLFVGDMGILKNISFLSSPDAVEAYDYLTDALGTNPLLLTELDLS 2588

Query: 260  --------------------------------DEGAKAIAELLKNNSIL-RVLELNNNMI 286
                                            +E  + +  + K N ++ + L LN   +
Sbjct: 2589 KVAKDYNWEKLSAFLLDSCCIVEKIRFFQGPAEETYQYLIRVFKQNPLISKELNLNATKL 2648

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA---LAKGLEGNKSLRELHLHGNSIG 343
            D      LA  LL++   R   L  +  G    +     +     + SL+EL L  N++ 
Sbjct: 2649 DLEKVNQLA-VLLQDKHFRINRLQLSKCGLTKESCSVLASVLSSDSSSLKELDLSNNNLQ 2707

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDE 402
            D G++ L +GL +    L  L++ + SIS +G   +A  ++ N   L+ ++L  N  G  
Sbjct: 2708 DSGVKQLWNGLKNNNCTLEKLNLSDCSISEEGYKALASALRSNPSHLIELDLRGNYPGQT 2767

Query: 403  GAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G +++ + L+   T + T+     +           V KD  ++  L L    +G     
Sbjct: 2768 GVKELTELLQDRYTKLKTLRFLSPDAEKACKYVPGLVGKDPFLVRELSLRDQKLGDTNIN 2827

Query: 462  ALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDE-VCSG 518
             L+ +L+  H  +NT++L  C I      F++  L+ N + +  L+L  N +R+  V   
Sbjct: 2828 YLAALLQDKHCKLNTIQLLNCSITEEQCVFLSSALKSNPSHLRELNLSGNKIRNTGVNLL 2887

Query: 519  CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDG 576
            C+ L   H  +  L      SLC   L    C  +  + K     L  ++L+ N+I + G
Sbjct: 2888 CDILEDSHCKLERL------SLCSCSLTDDCCSAVTSALKSNPSHLRELNLSGNQIENTG 2941

Query: 577  AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
               + + LK +    + +L L    LT        D KDL   + E  +++
Sbjct: 2942 VNLLCELLK-DSHCKLETLRLRCCSLTD------EDYKDLASALKENPLHL 2985



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 143/361 (39%), Gaps = 81/361 (22%)

Query: 321  ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG------------- 367
            +++  L    +L EL++  N + D G++ L SGL S   KL +L +              
Sbjct: 1655 SMSNALSSENNLIELNMSNNDLQDSGVQQLCSGLKSTMCKLEILGLSKCGITEKTCSALA 1714

Query: 368  ----------------NNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADA 410
                            NN++   G   +++ +K NCK L  +NL    I +EG E +A A
Sbjct: 1715 SALSSDSSSLKDLDLSNNNLQGSGVKLLSDNLKDNCK-LEKLNLLDCGISEEGYEALATA 1773

Query: 411  LKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+   + +T +DL GN+    G S + ++L D+    + DL    +  D  KA S++   
Sbjct: 1774 LESKLSHLTELDLRGND---PGESGVKKLL-DSLQNLNRDLQLRFLHPDAEKAFSDLTHI 1829

Query: 470  --------------------------------HGNINTLKLGWCQIGASGAEFVADMLRY 497
                                            H  INTL L   +I       +   L  
Sbjct: 1830 LNENLLLLRKLNLSEHYLVAKLKELAPLLADKHCKINTLTLKSSRITEDDCCVLISALNS 1889

Query: 498  N-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ----GAKCLA 552
            N + +  LDL    L D      +G+  F S ++         L +N +     G   LA
Sbjct: 1890 NPSNLKDLDLSKTNLGD------SGMKIF-STLFENNKCKLEKLNLNSVSIGEAGCAALA 1942

Query: 553  QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +F      L  +DL+ N++ D G   I+ AL  N   A+  L+L++  +++ G  AL  
Sbjct: 1943 SAFNSNPTKLKELDLSRNQLGDSGVTQIS-ALLQNSQCALQILSLSDCSISEEGYKALAS 2001

Query: 613  A 613
            A
Sbjct: 2002 A 2002



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 200  NGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVD 257
            N IT  G  A      SN + L  L+LSGN + D G+K +C +L +    +E+++LS  +
Sbjct: 2445 NSITEEGCAALTSAFNSNPSHLIELDLSGNKLADSGMKNICCLLQNVQCRLEKVKLSRCN 2504

Query: 258  LRDEGAKAIAELLKNNSILRV-LELNNNMIDYSGFT 292
            +  EG KA+A  LK+N   ++ L+L  N    SG +
Sbjct: 2505 ITAEGYKALASALKSNPSHQIKLDLTGNYPGPSGLS 2540



 Score = 45.8 bits (107), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 141  GFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAA 199
              T + +++    L E    LR    +D+S    GD G+  L++ L       E++    
Sbjct: 2965 SLTDEDYKDLASALKENPLHLR---ELDLSENKLGDSGMEKLSDLLKNLQHKLEKLHLYN 3021

Query: 200  NGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVD 257
              IT    K+    L+ N + L+ L+LSGN I ++GV  LCD+L D +  +E L L    
Sbjct: 3022 CSITEKQCKSLTSALKLNPSHLRELDLSGNEIKNKGVNLLCDVLKDSHCKLETLSLHDCG 3081

Query: 258  LRDEGAKAIAELLKNNSILRVLE 280
            + D    ++ + L N   L+ L+
Sbjct: 3082 ITD--VSSLTQCLMNTKALQFLK 3102



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)

Query: 337  LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLY 395
            L+ NSI +EG  AL S  +S    L  LD+  N ++  G  ++   ++N +  L  + L 
Sbjct: 2442 LNNNSITEEGCAALTSAFNSNPSHLIELDLSGNKLADSGMKNICCLLQNVQCRLEKVKLS 2501

Query: 396  MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYN 453
              +I  EG + +A ALK N +    +DL GN     G S   ++ + D  ++ ++    +
Sbjct: 2502 RCNITAEGYKALASALKSNPSHQIKLDLTGNYPGPSGLSWFFKLFVGDMGILKNISFLSS 2561

Query: 454  PIGADGAKALSEVL 467
            P   +    L++ L
Sbjct: 2562 PDAVEAYDYLTDAL 2575


>gi|320165466|gb|EFW42365.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 545

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 96/168 (57%), Gaps = 1/168 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++ EL L GN I D G RA+   + +    L V+D+  N I   GA  +AE +K  K+
Sbjct: 47  NTTMTELDLSGNLIADVGARAIAEAVRANCA-LTVVDLTENRIGDAGARAIAETLKVNKT 105

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L+ ++L  N IG  GA+ IAD LK N+T+  + L  N I   GA AIA  LK N+ +T L
Sbjct: 106 LIDLDLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTEL 165

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            L  N I   GA+AL+E LK +  +  L LG  QIG +GA  +A+ L+
Sbjct: 166 YLWQNQITCTGAQALAEALKANTTVTELDLGKNQIGDAGARAIAEALK 213



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 2/151 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           LD+  N I+  GA  +AE ++ NC +L  ++L  N IGD GA  IA+ LK N+T+  +DL
Sbjct: 53  LDLSGNLIADVGARAIAEAVRANC-ALTVVDLTENRIGDAGARAIAETLKVNKTLIDLDL 111

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I + GA AIA  LK N  +  L LA NPIG DGA+A+++ LK +  +  L L   Q
Sbjct: 112 NDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWQNQ 171

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRD 513
           I  +GA+ +A+ L+ N T++ LDL  N + D
Sbjct: 172 ITCTGAQALAEALKANTTVTELDLGKNQIGD 202



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 114/223 (51%), Gaps = 29/223 (13%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A + L+L    IG+   K + + +  N  +  L LS   + D GA+AIAE ++ N  L V
Sbjct: 21  ASQLLDLCKQQIGNAEAKAIAEAIKVNTTMTELDLSGNLIADVGARAIAEAVRANCALTV 80

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++L  N I  +G  ++AE L  N T+  L LN N  GA GA A+A GL+ NK+L EL L 
Sbjct: 81  VDLTENRIGDAGARAIAETLKVNKTLIDLDLNDNQIGAAGAQAIADGLKVNKTLIELSLA 140

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD+G +A                             +A+ +K   +L  + L+ N 
Sbjct: 141 KNPIGDDGAQA-----------------------------IADALKVNTTLTELYLWQNQ 171

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           I   GA+ +A+ALK N T+T +DLG N I   GA AIA  LK+
Sbjct: 172 ITCTGAQALAEALKANTTVTELDLGKNQIGDAGARAIAEALKE 214



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 33/198 (16%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           ++  ++L  N I D GA  IA+A++ N  +T +DL  N I   GA AIA  LK N  +  
Sbjct: 49  TMTELDLSGNLIADVGARAIAEAVRANCALTVVDLTENRIGDAGARAIAETLKVNKTLID 108

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL  N IGA GA+A+++ LK +  +  L L    IG  GA+ +AD L+ N T++ L L 
Sbjct: 109 LDLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLW 168

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            N +    C+                             GA+ LA++ K  N  +T +DL
Sbjct: 169 QNQI---TCT-----------------------------GAQALAEALK-ANTTVTELDL 195

Query: 568 AFNEIRDDGAFAIAQALK 585
             N+I D GA AIA+ALK
Sbjct: 196 GKNQIGDAGARAIAEALK 213



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 100/194 (51%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+  +  G+     +AE++  N T  E+  + N I   G +A    +++N AL  ++L+
Sbjct: 25  LDLCKQQIGNAEAKAIAEAIKVNTTMTELDLSGNLIADVGARAIAEAVRANCALTVVDLT 84

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + + + L  N  +  L L+   +   GA+AIA+ LK N  L  L L  N I
Sbjct: 85  ENRIGDAGARAIAETLKVNKTLIDLDLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPI 144

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  ++A+AL  N+T+  L+L  N     GA ALA+ L+ N ++ EL L  N IGD G
Sbjct: 145 GDDGAQAIADALKVNTTLTELYLWQNQITCTGAQALAEALKANTTVTELDLGKNQIGDAG 204

Query: 347 IRALMSGLSSRKGK 360
            RA+   L     K
Sbjct: 205 ARAIAEALKELAAK 218



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 11/198 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+SG    D G   +AE++  N     V    N I  AG +A    L+ N  L  L
Sbjct: 50  MTELDLSGNLIADVGARAIAEAVRANCALTVVDLTENRIGDAGARAIAETLKVNKTLIDL 109

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IG  G + + D L  N  +  L L+   + D+GA+AIA+ LK N+ L  L L  
Sbjct: 110 DLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWQ 169

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  +LAEAL  N+T+  L L  N  G  GA A+A      ++L+EL     +  
Sbjct: 170 NQITCTGAQALAEALKANTTVTELDLGKNQIGDAGARAIA------EALKEL-----AAK 218

Query: 344 DEGIRALMSGLSSRKGKL 361
           D+G++ L S L+++  +L
Sbjct: 219 DQGLQQLRSDLAAKDLEL 236


>gi|198417716|ref|XP_002127082.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 666

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 1/191 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           AL+  L  N  + +L L GNSI D+G + ++  L  +   +  L++G+N +     ++++
Sbjct: 283 ALSAALLHNTFVEQLDLSGNSINDDGAKHVIDMLK-KNSNICRLNLGSNQLKNDSGYYIS 341

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             +    SL  I +  N + D+ A  + +ALK N T+ ++D+  N        A A +L 
Sbjct: 342 SMLCTNTSLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTDSAGQAFAAMLM 401

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           DNS +TSL+L++N +G   A AL +  K +  + +L L W  +G  GA  +   LR+N+ 
Sbjct: 402 DNSSLTSLNLSWNMLGKIAAAALGQCFKVNSTLQSLDLSWNGLGDEGAALLGRPLRHNSN 461

Query: 501 ISILDLRANGL 511
           +  L L  N +
Sbjct: 462 LRHLSLAVNHI 472



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 10/269 (3%)

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N  ++ L+LSGN I D+G K + D+L  N+ + RL L S  L+++    I+ 
Sbjct: 283 ALSAALLHNTFVEQLDLSGNSINDDGAKHVIDMLKKNSNICRLNLGSNQLKNDSGYYISS 342

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +L  N+ L  + +++N +       L EAL  NST++SL ++ N        A A  L  
Sbjct: 343 MLCTNTSLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTDSAGQAFAAMLMD 402

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N SL  L+L  N +G     AL          L  LD+  N +  +GA  +   +++  +
Sbjct: 403 NSSLTSLNLSWNMLGKIAAAALGQCFKV-NSTLQSLDLSWNGLGDEGAALLGRPLRHNSN 461

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRT---------ITTIDLGGNNIHSKGASAIARVL 439
           L  ++L +N IG  GAE++A ++   +          +TT+ L  N +  KG   + + L
Sbjct: 462 LRHLSLAVNHIGPFGAERLASSICGIKGKKIKKTASGLTTLVLDRNPLGRKGVMYLLKHL 521

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLK 468
           + + V T L +    +  D  + L +++K
Sbjct: 522 QQSDVFTELSIKEVVLSPDLIEMLRQMIK 550



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 14/238 (5%)

Query: 155 NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           N F ++L      D+SG +  D+G   + + L  N     ++  +N +          +L
Sbjct: 291 NTFVEQL------DLSGNSINDDGAKHVIDMLKKNSNICRLNLGSNQLKNDSGYYISSML 344

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
            +N +L  + +S N + D+    LC+ L  N+ ++ L +S     D   +A A +L +NS
Sbjct: 345 CTNTSLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTDSAGQAFAAMLMDNS 404

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L+ NM+      +L +    NST++SL L+ N  G  GA  L + L  N +LR 
Sbjct: 405 SLTSLNLSWNMLGKIAAAALGQCFKVNSTLQSLDLSWNGLGDEGAALLGRPLRHNSNLRH 464

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGK--------LAVLDIGNNSISAKGAFHVAEYIK 384
           L L  N IG  G   L S +   KGK        L  L +  N +  KG  ++ ++++
Sbjct: 465 LSLAVNHIGPFGAERLASSICGIKGKKIKKTASGLTTLVLDRNPLGRKGVMYLLKHLQ 522



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 35/245 (14%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + + S+S+K    ++  + +   +  ++L  N I D+GA+ + D LK+N  I  ++LG N
Sbjct: 271 LHHRSLSSKDTLALSAALLHNTFVEQLDLSGNSINDDGAKHVIDMLKKNSNICRLNLGSN 330

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            + +     I+ +L  N+ +T + +++N +    A  L E LK +  + +L +   Q   
Sbjct: 331 QLKNDSGYYISSMLCTNTSLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTD 390

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
           S  +  A ML  N++++ L+L  N L                 I                
Sbjct: 391 SAGQAFAAMLMDNSSLTSLNLSWNML---------------GKI---------------- 419

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
             A  L Q FKV N  L S+DL++N + D+GA  + + L+ N +  +  L+LA N +  F
Sbjct: 420 -AAAALGQCFKV-NSTLQSLDLSWNGLGDEGAALLGRPLRHNSN--LRHLSLAVNHIGPF 475

Query: 606 GQSAL 610
           G   L
Sbjct: 476 GAERL 480



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 9/204 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + + +S     D+    L E+L  N T + +  + N  T +  +AF  +L  N +L +
Sbjct: 349 SLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTDSAGQAFAAMLMDNSSLTS 408

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNLS N +G      L      N+ ++ L LS   L DEGA  +   L++NS LR L L 
Sbjct: 409 LNLSWNMLGKIAAAALGQCFKVNSTLQSLDLSWNGLGDEGAALLGRPLRHNSNLRHLSLA 468

Query: 283 NNMIDYSGFTSLAEALLEN---------STIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            N I   G   LA ++            S + +L L+ N  G  G   L K L+ +    
Sbjct: 469 VNHIGPFGAERLASSICGIKGKKIKKTASGLTTLVLDRNPLGRKGVMYLLKHLQQSDVFT 528

Query: 334 ELHLHGNSIGDEGIRALMSGLSSR 357
           EL +    +  + I  L   + SR
Sbjct: 529 ELSIKEVVLSPDLIEMLRQMIKSR 552


>gi|444727434|gb|ELW67927.1| Nucleotide-binding oligomerization domain-containing protein 1
            [Tupaia chinensis]
          Length = 1109

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 1/177 (0%)

Query: 335  LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
            + L  N I D+G++ L   LS  +  L  L + +N I+  GA ++A+ +  CK L  + L
Sbjct: 889  IRLSVNQITDKGVKVLYEELSKYR-ILTFLGLYSNQITDVGARYIAKLLDECKGLTHLKL 947

Query: 395  YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
              N I  EG + +A A+K +++I  + + GN I  +GA A A  L+++  +T+L LAYN 
Sbjct: 948  GKNSITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAYNG 1007

Query: 455  IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            I  +G K+L++ L+++ ++    L   ++    AE +A+ML+ N T+  L L  N +
Sbjct: 1008 ISTEGGKSLAQALQWNASLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 1064



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 1/197 (0%)

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G   L + L   + L  L L+ N I D G R +   L   KG L  L +G NSI+++G  
Sbjct: 900  GVKVLYEELSKYRILTFLGLYSNQITDVGARYIAKLLDECKG-LTHLKLGKNSITSEGGK 958

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
             +A  +KN KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A+
Sbjct: 959  CLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAYNGISTEGGKSLAQ 1018

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
             L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +A+ L+ 
Sbjct: 1019 ALQWNASLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLAEGLQK 1078

Query: 498  NNTISILDLRANGLRDE 514
            N  I  + L  N ++ E
Sbjct: 1079 NTGIMEICLNGNLIKPE 1095



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 37/251 (14%)

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            G++ L    S    +L V+ +  N I+ KG   + E +   + L ++ LY N I D GA 
Sbjct: 875  GVQELQPCFS----RLTVIRLSVNQITDKGVKVLYEELSKYRILTFLGLYSNQITDVGAR 930

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             IA  L + + +T + LG N+I S+G   +A  +K++  I  + +  N IG +GAKA +E
Sbjct: 931  YIAKLLDECKGLTHLKLGKNSITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAE 990

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
             L+ H ++  L L +  I   G + +A  L++N ++ I  L  N L DEV          
Sbjct: 991  ALRNHPSLTNLSLAYNGISTEGGKSLAQALQWNASLRIFWLTKNELDDEV---------- 1040

Query: 526  HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                  A+ LA+  K VN+ L  + L  N+I   G   +A+ L+
Sbjct: 1041 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGIAQLAEGLQ 1077

Query: 586  ANEDVAVTSLN 596
             N  +    LN
Sbjct: 1078 KNTGIMEICLN 1088



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 95/202 (47%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            + +S     D+G+  L E L   +    +   +N IT  G +    +L     L  L L 
Sbjct: 889  IRLSVNQITDKGVKVLYEELSKYRILTFLGLYSNQITDVGARYIAKLLDECKGLTHLKLG 948

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 949  KNSITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAYNGI 1008

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
               G  SLA+AL  N+++R   L  N      A +LA+ L+ N++L+ L L  N I  +G
Sbjct: 1009 STEGGKSLAQALQWNASLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKG 1068

Query: 347  IRALMSGLSSRKGKLAVLDIGN 368
            I  L  GL    G + +   GN
Sbjct: 1069 IAQLAEGLQKNTGIMEICLNGN 1090



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 96/194 (49%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            + L E   + R  + + +      D G  ++A+ L   +    +    N IT+ G K   
Sbjct: 902  KVLYEELSKYRILTFLGLYSNQITDVGARYIAKLLDECKGLTHLKLGKNSITSEGGKCLA 961

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A+ L+
Sbjct: 962  LAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAYNGISTEGGKSLAQALQ 1021

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N+ LR+  L  N +D     SLAE L  N T++ L L  N   A G   LA+GL+ N  
Sbjct: 1022 WNASLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLAEGLQKNTG 1081

Query: 332  LRELHLHGNSIGDE 345
            + E+ L+GN I  E
Sbjct: 1082 IMEICLNGNLIKPE 1095



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 5/205 (2%)

Query: 266  IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
            + EL    S L V+ L+ N I   G   L E L +   +  L L  N    +GA  +AK 
Sbjct: 876  VQELQPCFSRLTVIRLSVNQITDKGVKVLYEELSKYRILTFLGLYSNQITDVGARYIAKL 935

Query: 326  LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
            L+  K L  L L  NSI  EG + L   + + K   ++ ++G   N I  +GA   AE +
Sbjct: 936  LDECKGLTHLKLGKNSITSEGGKCLALAVKNSK---SIFEVGMWGNRIGDEGAKAFAEAL 992

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            +N  SL  ++L  N I  EG + +A AL+ N ++    L  N +  + A ++A +LK N 
Sbjct: 993  RNHPSLTNLSLAYNGISTEGGKSLAQALQWNASLRIFWLTKNELDDEVAESLAEMLKVNQ 1052

Query: 444  VITSLDLAYNPIGADGAKALSEVLK 468
             +  L L  N I A G   L+E L+
Sbjct: 1053 TLKHLWLIQNQITAKGIAQLAEGLQ 1077



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 35/236 (14%)

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            F V E       L  I L +N I D+G + + + L + R +T + L  N I   GA  IA
Sbjct: 874  FGVQELQPCFSRLTVIRLSVNQITDKGVKVLYEELSKYRILTFLGLYSNQITDVGARYIA 933

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            ++L +   +T L L  N I ++G K L+  +K   +I  + +   +IG  GA+  A+ LR
Sbjct: 934  KLLDECKGLTHLKLGKNSITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALR 993

Query: 497  YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
             + +++ L L  NG+  E                                G K LAQ+ +
Sbjct: 994  NHPSLTNLSLAYNGISTE--------------------------------GGKSLAQALQ 1021

Query: 557  VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
              N +L    L  NE+ D+ A ++A+ LK N+   +  L L  N +T  G + L +
Sbjct: 1022 W-NASLRIFWLTKNELDDEVAESLAEMLKVNQ--TLKHLWLIQNQITAKGIAQLAE 1074


>gi|399498094|emb|CCG20375.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 550

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMYSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399498090|emb|CCG20373.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/295 (20%), Positives = 120/295 (40%), Gaps = 49/295 (16%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYL----QGAKCLAQSFK--------------------------- 556
                 H     + ++YL    +GA  +A + K                           
Sbjct: 352 -----NHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASC 406

Query: 557 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 407 IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|399498038|emb|CCG20347.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G   L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASRIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSSNTLRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G   +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMTGNDITAEAASAIASRIAAKQLLAKL------SLSENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNTLRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGIVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L+ 
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASRIAAKQLLAKLSLSE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNTLRRAGARVL 459



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           +A  +     +  L L+ N     GA  +AK LEG+  L E                   
Sbjct: 403 IASRIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSSNTLRRAGARVLAQT 462

Query: 335 ---------LHLHGNSIGDEGIRAL 350
                    L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399497980|emb|CCG20318.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|75076248|sp|Q4R642.1|TCTE1_MACFA RecName: Full=T-complex-associated testis-expressed protein 1;
           Short=Tcte-1
 gi|67970178|dbj|BAE01433.1| unnamed protein product [Macaca fascicularis]
          Length = 501

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSH 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     L+    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLN--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSHNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL N+S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-NHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L++N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSHNLIGDRGARGAAK-LLNHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+ +N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSHNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLNHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 445

Query: 499 NTISILDLRANGLRDE 514
            T+   DLR + +  E
Sbjct: 446 KTLLEFDLRLSDVAQE 461



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSHNLIGDRGARGAAKLLN-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L  +  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARGAAKLLNHS-RLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|109071337|ref|XP_001099848.1| PREDICTED: t-complex-associated testis-expressed protein 1 [Macaca
           mulatta]
 gi|355748595|gb|EHH53078.1| hypothetical protein EGM_13641 [Macaca fascicularis]
          Length = 501

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSH 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     L+    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLN--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSHNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL N+S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-NHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L++N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSHNLIGDRGARGAAK-LLNHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+ +N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSHNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLNHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 445

Query: 499 NTISILDLRANGLRDE 514
            T+   DLR + +  E
Sbjct: 446 KTLLEFDLRLSDVAQE 461



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSHNLIGDRGARGAAKLLN-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L  +  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARGAAKLLNHS-RLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|399498104|emb|CCG20380.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399498010|emb|CCG20333.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTDLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTD-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|194215961|ref|XP_001494453.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Equus
            caballus]
          Length = 1061

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 144/311 (46%), Gaps = 18/311 (5%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDIL------VDNAGVERLQLSSVDLRDEGAKAIA 267
            L +N  L  L L  N +G  GVK LC  L      + N  ++R QLS     D  A  IA
Sbjct: 709  LSTNPNLIELVLYRNALGSRGVKLLCQGLRHPNCKLQNLRLKRCQLSGPACWDLAAALIA 768

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
                N +++R ++L+ N +   G   L E L      ++ + L      A     +A  L
Sbjct: 769  ----NKNLIR-MDLSGNGLGLPGIRLLCEGLRHPRCRLQMIQLRKCQLEAGACREIASVL 823

Query: 327  EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
              N+ L EL L GN++ D G R L  GLS+   +L +L +    ++A     +A  +   
Sbjct: 824  STNRHLVELDLTGNALEDLGGRLLCEGLSNPVCRLQILWLKICRLTAAACEDLASTLSVN 883

Query: 387  KSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            +SL+ ++L +ND+GD G   + + L+  +  + T+ LG   + S     ++ VL+ N  +
Sbjct: 884  QSLVELDLSLNDLGDAGVLLLCEGLRHPQCKLQTLRLGICQLSSAACEGLSAVLQVNPHL 943

Query: 446  TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADMLRYNNTIS 502
              LDL++N +G  G   L E L+ H      KL W   C + A   E ++  L  N T+ 
Sbjct: 944  RELDLSFNDLGDRGVWLLCEGLR-HPTCRLQKL-WLDSCGLTAKACEALSCSLGVNRTLR 1001

Query: 503  ILDLRANGLRD 513
             L L  N L D
Sbjct: 1002 ELYLTHNALGD 1012



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 14/273 (5%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  N +L EL L+ N++G  G++ L  GL     KL  L +    +S    + 
Sbjct: 702 SEQLASALSTNPNLIELVLYRNALGSRGVKLLCQGLRHPNCKLQNLRLKRCQLSGPACWD 761

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   K+L+ ++L  N +G  G   + + L+  R  +  I L    + +     IA 
Sbjct: 762 LAAALIANKNLIRMDLSGNGLGLPGIRLLCEGLRHPRCRLQMIQLRKCQLEAGACREIAS 821

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADM 494
           VL  N  +  LDL  N +   G + L E L     +  L++ W   C++ A+  E +A  
Sbjct: 822 VLSTNRHLVELDLTGNALEDLGGRLLCEGLS--NPVCRLQILWLKICRLTAAACEDLAST 879

Query: 495 LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
           L  N ++  LDL  N L D  V   C GL      + +L+      L I  L  A C   
Sbjct: 880 LSVNQSLVELDLSLNDLGDAGVLLLCEGLRHPQCKLQTLR------LGICQLSSAACEGL 933

Query: 554 SFKV-VNEALTSIDLAFNEIRDDGAFAIAQALK 585
           S  + VN  L  +DL+FN++ D G + + + L+
Sbjct: 934 SAVLQVNPHLRELDLSFNDLGDRGVWLLCEGLR 966



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 3/206 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
            R    +D++G    D G   L E L       ++ +     +TAA  +     L  N +L
Sbjct: 827  RHLVELDLTGNALEDLGGRLLCEGLSNPVCRLQILWLKICRLTAAACEDLASTLSVNQSL 886

Query: 221  KTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+LS N +GD GV  LC+ L      ++ L+L    L     + ++ +L+ N  LR L
Sbjct: 887  VELDLSLNDLGDAGVLLLCEGLRHPQCKLQTLRLGICQLSSAACEGLSAVLQVNPHLREL 946

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L+ N +   G   L E L   +  ++ L L+     A    AL+  L  N++LREL+L 
Sbjct: 947  DLSFNDLGDRGVWLLCEGLRHPTCRLQKLWLDSCGLTAKACEALSCSLGVNRTLRELYLT 1006

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVL 364
             N++GD G+R L   LS     L VL
Sbjct: 1007 HNALGDTGVRLLCKRLSHAGCPLRVL 1032



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 7/250 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+SG   G  G+  L E L + +   + +      + A   +    VL +N  L  L+L
Sbjct: 775  MDLSGNGLGLPGIRLLCEGLRHPRCRLQMIQLRKCQLEAGACREIASVLSTNRHLVELDL 834

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQ---LSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            +GN + D G + LC+ L +   V RLQ   L    L     + +A  L  N  L  L+L+
Sbjct: 835  TGNALEDLGGRLLCEGLSNP--VCRLQILWLKICRLTAAACEDLASTLSVNQSLVELDLS 892

Query: 283  NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +  +G   L E L      +++L L      +     L+  L+ N  LREL L  N 
Sbjct: 893  LNDLGDAGVLLLCEGLRHPQCKLQTLRLGICQLSSAACEGLSAVLQVNPHLRELDLSFND 952

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            +GD G+  L  GL     +L  L + +  ++AK    ++  +   ++L  + L  N +GD
Sbjct: 953  LGDRGVWLLCEGLRHPTCRLQKLWLDSCGLTAKACEALSCSLGVNRTLRELYLTHNALGD 1012

Query: 402  EGAEKIADAL 411
             G   +   L
Sbjct: 1013 TGVRLLCKRL 1022


>gi|386336010|ref|YP_006032180.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
 gi|334198460|gb|AEG71644.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
          Length = 1053

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 179/430 (41%), Gaps = 111/430 (25%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            LSG TG    E+   L   A+      S+D+SG   GD  +  LA S         ++ +
Sbjct: 654  LSGCTGSAVSEAG--LAVLAR--LPLESLDLSGTRIGDREVQALASSTSLT----SLNLS 705

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N I  AG +A    L  N  L  LN+S NPI D GV+ L D            L+S++L
Sbjct: 706  GNRIGDAGARA----LGRNTVLTALNVSANPIRDTGVQALAD---------SRSLTSLEL 752

Query: 259  RDEG---AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            R  G    +A    L +N++LR L++++N +       LA     N T+ SL  N     
Sbjct: 753  RGIGIGIGEASIAALASNTVLRSLDISSNDLSEQSAAELAR----NQTLASLKAN----- 803

Query: 316  ALG-ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            A G  N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +
Sbjct: 804  ACGLTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQ 858

Query: 375  GAFHV--------------------AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
            G   +                    A  +   + L  + L  N IG  GA+++A     N
Sbjct: 859  GLCPLELSRTLTSLDVSGIGCGDRGALLLSKNRVLTSLKLGFNGIGSAGAQRLA----AN 914

Query: 415  RTITTIDLGGNNIHSKGASAIA-------------------------------------- 436
            RT+ ++DL GN I    A A+A                                      
Sbjct: 915  RTLISLDLRGNTIDVDAAKALANTGRLTSLNVSDCKLDDAAASALAESLTLTSLDVSVNR 974

Query: 437  ------RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                  + L  N+ +TSL++++N IG DGA+AL+E      ++  L      IG +GA  
Sbjct: 975  LSGRAAQALAGNATLTSLNISHNHIGPDGARALAE----SPSLTVLDARANDIGEAGARA 1030

Query: 491  VADMLRYNNT 500
            + +  R   T
Sbjct: 1031 LENNTRMQGT 1040



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 178/391 (45%), Gaps = 74/391 (18%)

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE---- 268
             L S+ +L +LNLSGN IGD G + L      N  +  L +S+  +RD G +A+A+    
Sbjct: 692  ALASSTSLTSLNLSGNRIGDAGARALG----RNTVLTALNVSANPIRDTGVQALADSRSL 747

Query: 269  ------------------LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
                               L +N++LR L++++N +       LA     N T+ SL  N
Sbjct: 748  TSLELRGIGIGIGEASIAALASNTVLRSLDISSNDLSEQSAAELA----RNQTLASLKAN 803

Query: 311  GNYGGALG-ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
                 A G  N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N
Sbjct: 804  -----ACGLTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHN 853

Query: 370  SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
             I+ +G       ++  ++L  +++     GD GA      L +NR +T++ LG N I S
Sbjct: 854  PITLQGLC----PLELSRTLTSLDVSGIGCGDRGAL----LLSKNRVLTSLKLGFNGIGS 905

Query: 430  KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
             GA  +A     N  + SLDL  N I  D AKAL+      G + +L +  C++     +
Sbjct: 906  AGAQRLAA----NRTLISLDLRGNTIDVDAAKALANT----GRLTSLNVSDCKL----DD 953

Query: 490  FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK 549
              A  L  + T++ LD+  N L         G +   S   S  H+           GA+
Sbjct: 954  AAASALAESLTLTSLDVSVNRLSGRAAQALAGNATLTSLNISHNHI--------GPDGAR 1005

Query: 550  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 580
             LA+S      +LT +D   N+I + GA A+
Sbjct: 1006 ALAES-----PSLTVLDARANDIGEAGARAL 1031



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 194/427 (45%), Gaps = 66/427 (15%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            +G T + +      + + + L++L+LSG  IGD  V+ L      +  +  L LS   + 
Sbjct: 655  SGCTGSAVSEAGLAVLARLPLESLDLSGTRIGDREVQALAS----STSLTSLNLSGNRIG 710

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            D GA+A    L  N++L  L ++ N I  +G     +AL ++ ++ SL L G  G  +G 
Sbjct: 711  DAGARA----LGRNTVLTALNVSANPIRDTGV----QALADSRSLTSLELRG-IGIGIGE 761

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             ++A  L  N  LR L +  N + ++    L     +R   LA L      ++      +
Sbjct: 762  ASIA-ALASNTVLRSLDISSNDLSEQSAAEL-----ARNQTLASLKANACGLTNG----M 811

Query: 380  AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            A+ +   +SL  + +  N IGD G   IA    +N ++ T++L  N I  +G       L
Sbjct: 812  AQQLARIRSLRTLEVGSNSIGDTGVLAIA----RNASLRTLNLSHNPITLQGLCP----L 863

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            + +  +TSLD++    G  GA  LS+    +  + +LKLG+  IG++GA+ +A     N 
Sbjct: 864  ELSRTLTSLDVSGIGCGDRGALLLSK----NRVLTSLKLGFNGIGSAGAQRLA----ANR 915

Query: 500  TISILDLRANGLRDEVC--------------SGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            T+  LDLR N +  +                S C       SA+     +    + +N L
Sbjct: 916  TLISLDLRGNTIDVDAAKALANTGRLTSLNVSDCKLDDAAASALAESLTLTSLDVSVNRL 975

Query: 546  QG--AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
             G  A+ LA      N  LTS++++ N I  DGA A+A      E  ++T L+   N + 
Sbjct: 976  SGRAAQALAG-----NATLTSLNISHNHIGPDGARALA------ESPSLTVLDARANDIG 1024

Query: 604  KFGQSAL 610
            + G  AL
Sbjct: 1025 EAGARAL 1031



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 121/236 (51%), Gaps = 39/236 (16%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           + L++LN++G  IGD+G +    +L  N  ++ L  ++  +   GA+A+AE    + +L 
Sbjct: 153 LPLESLNVAGADIGDDGAR----LLAANPSLKTLNAANGGIGAAGARALAE----SPVLT 204

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L+L  N I   G    A AL  + ++ +L +       +GA ALA    GN++L  L L
Sbjct: 205 SLDLTQNGIGDEG----ARALAGSRSLTNLAVLNCLVTDVGAQALA----GNRTLTALDL 256

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            GN I +          +  + + A  D   N I+A+GA+ +A+     +SL  +++  N
Sbjct: 257 -GNLITE----------TDNELEQAGYDRTANEITAQGAWALAQN----RSLTSLSIQGN 301

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             GD G +    AL +NRT+T++++   ++    A+ +AR    N V+TSL + +N
Sbjct: 302 LCGDGGVQ----ALARNRTLTSLNVAYTDMTPASATELAR----NPVLTSLSVRWN 349



 Score = 42.0 bits (97), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 61/292 (20%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G + GD+G   LA     N + + +    N        A    L  +  L +L
Sbjct: 155 LESLNVAGADIGDDGARLLA----ANPSLKTL----NAANGGIGAAGARALAESPVLTSL 206

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IGDEG + L      +  +  L + +  + D GA+A+A     N  L  L+L N
Sbjct: 207 DLTQNGIGDEGARALAG----SRSLTNLAVLNCLVTDVGAQALA----GNRTLTALDLGN 258

Query: 284 ------NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
                 N ++ +G+   A  +                 A GA ALA+    N+SL  L +
Sbjct: 259 LITETDNELEQAGYDRTANEIT----------------AQGAWALAQ----NRSLTSLSI 298

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYM 396
            GN  GD G++AL     +R   L  L++    ++   A  +A   +    S+ W     
Sbjct: 299 QGNLCGDGGVQAL-----ARNRTLTSLNVAYTDMTPASATELARNPVLTSLSVRW----N 349

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA-----RVLKDNS 443
             +GD G  ++A    ++ ++T +D     +  +G  A+A     RV  DN+
Sbjct: 350 YGLGDAGVVELA----KSPSLTLLDARSTGMGERGTLALAANARIRVQHDNA 397



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 50/285 (17%)

Query: 330 KSLRELHLHGN--SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           ++L ELH + N  S+  +G    ++ L +    L  LD+   + SAK +  +A Y+    
Sbjct: 97  RALSELHNYPNLTSLQLKG-NLTLTDLKALPATLRHLDLSACTGSAKSSGAIA-YLAGLP 154

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            L  +N+   DIGD+GA  +A     N ++ T+    N  +    +A AR L ++ V+TS
Sbjct: 155 -LESLNVAGADIGDDGARLLA----ANPSLKTL----NAANGGIGAAGARALAESPVLTS 205

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL  N IG +GA+AL+       N+  L    C +   GA+ +A     N T++ LD  
Sbjct: 206 LDLTQNGIGDEGARALAGSRSLT-NLAVLN---CLVTDVGAQALAG----NRTLTALD-- 255

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSI 565
              L + +    N L               Y    N +  QGA  LAQ     N +LTS+
Sbjct: 256 ---LGNLITETDNEL-----------EQAGYDRTANEITAQGAWALAQ-----NRSLTSL 296

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            +  N   D G  A+A+      +  +TSLN+A   +T    + L
Sbjct: 297 SIQGNLCGDGGVQALAR------NRTLTSLNVAYTDMTPASATEL 335


>gi|432937796|ref|XP_004082474.1| PREDICTED: protein phosphatase 1 regulatory subunit 37-like
           [Oryzias latipes]
          Length = 441

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 2/225 (0%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           RL + +V L D  A+++++ L   S L VL L+N  +  +   +L  AL  N  ++ LHL
Sbjct: 132 RLDVCNVSLVDYPARSLSKALLT-SRLSVLHLHNAQLSGTPLFTLVGALKHNRALQELHL 190

Query: 310 NGNYGGAL-GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             N   +   A  L   L  N ++  L L  N + D G+  L  GLS +   L VL + N
Sbjct: 191 TNNLLNSYQDAMQLGDLLRFNTTIHTLELSNNMVADAGLEELCDGLSRQTEGLKVLKLRN 250

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N+++  G  H+A+ +   K L  ++L  N +G+E  + I + L  N T+  + L   NI 
Sbjct: 251 NNVTKSGMEHLAKALPVLKVLQVLDLGENSLGNEAIQVIREPLIANNTLKQLGLAQTNIT 310

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +GA A+A  + ++  I  LDL+ NP+   G  ALS  L+ + ++
Sbjct: 311 CEGAVALAEFIVESRQIHKLDLSQNPVRLGGLMALSLSLRINRSL 355



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 1/149 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALK 221
              ++++S     D GL  L + L       +V     N +T +G++     L     L+
Sbjct: 213 TIHTLELSNNMVADAGLEELCDGLSRQTEGLKVLKLRNNNVTKSGMEHLAKALPVLKVLQ 272

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  N +G+E ++ + + L+ N  +++L L+  ++  EGA A+AE +  +  +  L+L
Sbjct: 273 VLDLGENSLGNEAIQVIREPLIANNTLKQLGLAQTNITCEGAVALAEFIVESRQIHKLDL 332

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           + N +   G  +L+ +L  N ++  L +N
Sbjct: 333 SQNPVRLGGLMALSLSLRINRSLAFLDVN 361



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 1/165 (0%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           L + L +N T   +  + N +  AG++   DG+ +    LK L L  N +   G++ L  
Sbjct: 204 LGDLLRFNTTIHTLELSNNMVADAGLEELCDGLSRQTEGLKVLKLRNNNVTKSGMEHLAK 263

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L     ++ L L    L +E  + I E L  N+ L+ L L    I   G  +LAE ++E
Sbjct: 264 ALPVLKVLQVLDLGENSLGNEAIQVIREPLIANNTLKQLGLAQTNITCEGAVALAEFIVE 323

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +  I  L L+ N     G  AL+  L  N+SL  L ++  S+ ++
Sbjct: 324 SRQIHKLDLSQNPVRLGGLMALSLSLRINRSLAFLDVNPVSLEEQ 368


>gi|344299115|ref|XP_003421233.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like
            isoform 1 [Loxodonta africana]
          Length = 1038

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 3/258 (1%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            + + +D+S    GD G+  L E+L +     + +     G+T         VL SN  L 
Sbjct: 744  SLTELDLSDNTVGDPGMRVLCETLQHPGCNIQRLWLGRCGLTHDCCLGISSVLCSNQKLV 803

Query: 222  TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             L+LS N +GD GVK LC  L      +++L L S  L  +    +A +L  N  L  L 
Sbjct: 804  ELDLSNNTLGDSGVKHLCVGLRHLFCNLQKLWLVSCCLTSDCCPDLASVLTTNQSLTRLY 863

Query: 281  LNNNMIDYSGFTSLAE-ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            +  N +  +G   L E A      ++ L L  +   +L   AL+  L  N +L  L+L  
Sbjct: 864  MGENALGDAGVGILCEKAKHPQCKLQKLGLVNSGLTSLCCPALSLALSTNPNLTHLYLRD 923

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N++GD+GI+ L  GL +   KL +L++ N S+++   + ++  + + +SL  ++L  ND+
Sbjct: 924  NALGDKGIKILCEGLMNPNCKLQMLELDNCSLTSHCCWDLSTLLTSNQSLQELSLGSNDL 983

Query: 400  GDEGAEKIADALKQNRTI 417
            GD G   + + LKQ   +
Sbjct: 984  GDLGVILLCEVLKQQSCL 1001



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 2/128 (1%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           SL  ++L  N +GD G   + + L+     I  + LG   +       I+ VL  N  + 
Sbjct: 744 SLTELDLSDNTVGDPGMRVLCETLQHPGCNIQRLWLGRCGLTHDCCLGISSVLCSNQKLV 803

Query: 447 SLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            LDL+ N +G  G K L   L+    N+  L L  C + +     +A +L  N +++ L 
Sbjct: 804 ELDLSNNTLGDSGVKHLCVGLRHLFCNLQKLWLVSCCLTSDCCPDLASVLTTNQSLTRLY 863

Query: 506 LRANGLRD 513
           +  N L D
Sbjct: 864 MGENALGD 871


>gi|399497942|emb|CCG20299.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELEDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNLISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNLISEEGVDELKEIFKKSPEML 498



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE+ D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELEDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|399497940|emb|CCG20298.1| Ran GTPase activating protein 2 [Solanum chacoense]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 121/295 (41%), Gaps = 49/295 (16%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYL----QGAKCLAQSFK--------------------------- 556
                KH     + ++YL    +GA  +A + K                           
Sbjct: 352 -----KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASC 406

Query: 557 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 407 IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|300694035|ref|YP_003750008.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299076072|emb|CBJ35382.1| putative leucine-rich-repeat type III effector protein (GALA1-like)
           [Ralstonia solanacearum PSI07]
          Length = 590

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 161/329 (48%), Gaps = 49/329 (14%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           A++L  N T   ++   + +  AG +A    L +   L +LN+S N IG EG K L +  
Sbjct: 280 AQALARNTTLTSLNVRLSRLGDAGARA----LAATTTLTSLNVSLNEIGPEGAKALAN-- 333

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
             N  +  L +    +  +GA+A+A  +     L  L ++ N I+ +G    A+AL  N+
Sbjct: 334 --NTSLTSLDIGGNKVGVDGAQALATSMT----LTSLVIHRNRIEVAG----AQALANNT 383

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            + SL ++ N  G  GA A       N++L  L +  N IGDEG + L     +R   L 
Sbjct: 384 RLTSLDISDNGLGVWGARAFVD----NETLTSLRIATNMIGDEGAKWL-----ARNTTLT 434

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            LDIG N I   GA  +A   K    L  +N+  N IG  G  ++A    +N T+  +++
Sbjct: 435 SLDIGENRIGETGAQALAGNTK----LTSLNISGNAIGMMGVLRLA----RNTTLAALNV 486

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGW 480
             N I   GA  +AR    N+ + SL + YN IG +GA+AL+      GN  + +L +  
Sbjct: 487 SRNQIGVAGAQDLAR----NTTLRSLVVNYNEIGNEGARALA------GNKTLASLSVVD 536

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRAN 509
           C+IG  GA  +A     N T+++LD+  N
Sbjct: 537 CRIGDEGAHALA----ANTTLALLDVSLN 561



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 190/394 (48%), Gaps = 71/394 (18%)

Query: 219 ALKTLNLSG--NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           +LK L+LS     I  EG+  L  +      + RL +S   +  EGA+ +A +      L
Sbjct: 143 SLKALDLSDCRAQITSEGIAHLSKL-----PLVRLNVSHNRIDAEGARLLAAM----PTL 193

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L++++N I   G    A+AL +++T+  L++  N  G  GA ALA     N  L  L+
Sbjct: 194 TELDISHNDIRADG----AQALADSATLTLLNVGNNRIGDRGAQALA----ANTKLTSLN 245

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
              N IG  G++AL +  +     L+   I   S         A+ +    +L  +N+ +
Sbjct: 246 ASANGIGSAGVQALAANATLAALDLSCTSIDEES---------AQALARNTTLTSLNVRL 296

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           + +GD GA     AL    T+T++++  N I  +GA A+A    +N+ +TSLD+  N +G
Sbjct: 297 SRLGDAGAR----ALAATTTLTSLNVSLNEIGPEGAKALA----NNTSLTSLDIGGNKVG 348

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            DGA+AL+  +     + +L +   +I  +GA+ +A+    N  ++ LD+  NGL     
Sbjct: 349 VDGAQALATSM----TLTSLVIHRNRIEVAGAQALAN----NTRLTSLDISDNGL----- 395

Query: 517 SGCNGLSFF--HSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEI 572
            G  G   F  +  + SL+      +  N +  +GAK LA+     N  LTS+D+  N I
Sbjct: 396 -GVWGARAFVDNETLTSLR------IATNMIGDEGAKWLAR-----NTTLTSLDIGENRI 443

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            + GA A+A   K      +TSLN++ N +   G
Sbjct: 444 GETGAQALAGNTK------LTSLNISGNAIGMMG 471



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 214/455 (47%), Gaps = 88/455 (19%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + +SG +  D+ L  L  SL     A ++S     IT+ GI        S + L  
Sbjct: 122 ALEKLTLSG-DVTDDDLKGLPASL----KALDLSDCRAQITSEGIAHL-----SKLPLVR 171

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+S N I  EG + L  +      +  L +S  D+R +GA+A+A+    ++ L +L + 
Sbjct: 172 LNVSHNRIDAEGARLLAAMPT----LTELDISHNDIRADGAQALAD----SATLTLLNVG 223

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL-------------------- 322
           NN I   G    A+AL  N+ + SL+ + N  G+ G  AL                    
Sbjct: 224 NNRIGDRG----AQALAANTKLTSLNASANGIGSAGVQALAANATLAALDLSCTSIDEES 279

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L  N +L  L++  + +GD G RAL +  +     L  L++  N I  +GA    + 
Sbjct: 280 AQALARNTTLTSLNVRLSRLGDAGARALAATTT-----LTSLNVSLNEIGPEGA----KA 330

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           + N  SL  +++  N +G +GA+ +A ++    T+T++ +  N I   GA A+A    +N
Sbjct: 331 LANNTSLTSLDIGGNKVGVDGAQALATSM----TLTSLVIHRNRIEVAGAQALA----NN 382

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLD++ N +G  GA+A  +    +  + +L++    IG  GA+++A     N T++
Sbjct: 383 TRLTSLDISDNGLGVWGARAFVD----NETLTSLRIATNMIGDEGAKWLA----RNTTLT 434

Query: 503 ILDLRANGLRD---EVCSGCNGLSFFHSAIYSLKHMLFYSLCINY-------------LQ 546
            LD+  N + +   +  +G   L+  + +  ++  M    L  N              + 
Sbjct: 435 SLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLRLARNTTLAALNVSRNQIGVA 494

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
           GA+ LA+     N  L S+ + +NEI ++GA A+A
Sbjct: 495 GAQDLAR-----NTTLRSLVVNYNEIGNEGARALA 524



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 80/293 (27%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L    + +S+D+ G   G +G    A++L  + T   +    N I  AG +A   
Sbjct: 326 EGAKALANNTSLTSLDIGGNKVGVDG----AQALATSMTLTSLVIHRNRIEVAGAQA--- 378

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L +N  L +L++S N +G  G +      VDN  +  L++++  + DEGAK +A     
Sbjct: 379 -LANNTRLTSLDISDNGLGVWGARAF----VDNETLTSLRIATNMIGDEGAKWLAR---- 429

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK-------- 324
           N+ L  L++  N I  +G    A+AL  N+ + SL+++GN  G +G   LA+        
Sbjct: 430 NTTLTSLDIGENRIGETG----AQALAGNTKLTSLNISGNAIGMMGVLRLARNTTLAALN 485

Query: 325 ------GLEG------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                 G+ G      N +LR L ++ N IG+EG RAL                GN +++
Sbjct: 486 VSRNQIGVAGAQDLARNTTLRSLVVNYNEIGNEGARALA---------------GNKTLA 530

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +         + +C+           IGDEGA     AL  N T+  +D+  N
Sbjct: 531 SLS-------VVDCR-----------IGDEGAH----ALAANTTLALLDVSLN 561


>gi|399498012|emb|CCG20334.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399498062|emb|CCG20359.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKESGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|399497944|emb|CCG20300.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG  +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELEDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNLISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNLISEEGVDELKEIFKKSPEML 498



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 61/342 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  K  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIKAEEAEELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
               G N   A    +V +E ++ C +L ++NL  N +G++G       L+    +  + 
Sbjct: 190 DFVAGRNEAEALDVMNVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELF 248

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    
Sbjct: 249 LMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSST 308

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSL 540
           ++G+ G   + + L   + +  LDLR N    EV    C  LS         KH     +
Sbjct: 309 RVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEI 359

Query: 541 CINYL----QGAKCLAQSFK----------------------------VVNEALTSIDLA 568
            ++YL    +GA  +A + K                               + L  + L 
Sbjct: 360 YLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLG 419

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            NE+ D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 420 ENELEDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|399497938|emb|CCG20297.1| Ran GTPase activating protein 2 [Solanum chacoense]
 gi|399498100|emb|CCG20378.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 121/295 (41%), Gaps = 49/295 (16%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYL----QGAKCLAQSFK--------------------------- 556
                KH     + ++YL    +GA  +A + K                           
Sbjct: 352 -----KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASC 406

Query: 557 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 407 IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|109128476|ref|XP_001084287.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Macaca mulatta]
          Length = 1044

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 768  VGHLKLTFCSVGPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 824

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 825  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 883

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 884  NNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 943

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G   L+E LK + ++  LKL    I   G
Sbjct: 944  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLG 1003

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1004 AEALLQALERNDTILEVWLRGN 1025



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 118/243 (48%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 779  GPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 834

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 835  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARV 894

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 895  LAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 954

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N L+DE VC    GL        SLK +   + CI YL GA+ L Q
Sbjct: 955  LAKNVMLEELCLEENHLQDEGVCCLAEGL----KRNSSLKILKLSNNCITYL-GAEALLQ 1009

Query: 554  SFK 556
            + +
Sbjct: 1010 ALE 1012



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 8/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G       AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 765  GLNVGHLKLTFCSVGPAECAALAF--VLRHLRQPVALQLDYNSVGDIGVEQLLPCL---- 818

Query: 247  GVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            GV + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       
Sbjct: 819  GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 878

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +L L  N+  A GA  LA+GL GN SL+ L   GN +GDEG +AL   L   +  L  L 
Sbjct: 879  ALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQS-LRWLS 937

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N
Sbjct: 938  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNN 997

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I   GA A+ + L+ N  I  + L  N    + A  L
Sbjct: 998  CITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 85/164 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 867  MAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEA 926

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G   LAE L  N
Sbjct: 927  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRN 986

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E
Sbjct: 987  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLE 1030



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 78/149 (52%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 877  FLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWL 936

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+DEG   +AE LK NS L++L+L+N
Sbjct: 937  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSN 996

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL  N TI  + L GN
Sbjct: 997  NCITYLGAEALLQALERNDTILEVWLRGN 1025



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 830  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 889

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  NA ++ L      + DEGA+A+AE                        
Sbjct: 890  AGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAE------------------------ 925

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                AL ++ ++R L L GN  G++GA ALA  L  N  L EL L  N + DEG+  L  
Sbjct: 926  ----ALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAE 981

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            GL  R   L +L + NN I+  GA  + + ++   ++L + L  N    E A+K+
Sbjct: 982  GL-KRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035


>gi|399498046|emb|CCG20351.1| Ran GTPase activating protein 2 [Solanum tarijense]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      +AVL++  N I+ +
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVLEMAGNDITVE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +I+ AL+++R +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQISKALERHRHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  ++++ +
Sbjct: 383 PSVAVLEMAGNDITVEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQISKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -RHRHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 41/256 (16%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
                KH                         E LT I L++  + D+GA AIA ALK +
Sbjct: 352 -----KH-------------------------ENLTEIYLSYLNLEDEGAIAIANALK-D 380

Query: 588 EDVAVTSLNLANNFLT 603
              +V  L +A N +T
Sbjct: 381 SAPSVAVLEMAGNDIT 396


>gi|300693896|ref|YP_003749869.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299075933|emb|CBJ35242.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
           solanacearum PSI07]
          Length = 1002

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 173/384 (45%), Gaps = 105/384 (27%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAES---LGYNQTAEEVSFA-----------------ANG 201
           R   S+D+S    GD G   LA S      N +  E+S A                  N 
Sbjct: 600 RKLESLDLSDTPIGDRGAQLLASSTSLTSLNLSGNEISDAGAAAFADNTSLTSLNLRGNH 659

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC-----------LCDILVDNAGVER 250
           I+ AG +A    L  N  L +L++S NPIG+ GV+            LC   +++ GVE 
Sbjct: 660 ISDAGAEA----LGRNTVLTSLDVSANPIGNTGVQALASSRSLTSLNLCSTWIEDEGVEA 715

Query: 251 LQ----LSSVDLRDE--GAKAIAELLKNNSI-----------------------LRVLEL 281
           L     L S+D+     GA+  AEL +N ++                       L  LEL
Sbjct: 716 LASNTVLRSLDISHNRFGAQFAAELAQNRTLASLKANHCSLTNNVAQQLASIRSLTALEL 775

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++N+ID +G     +A++ N+++RSL L+ N  G  G +ALA     +++L  L +    
Sbjct: 776 SSNLIDDAGV----QAIVRNASLRSLDLSQNPIGLGGLHALAL----SRTLTSLDVSCIG 827

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            GD G   L     S+   L +L +G+N I+++G     + +   +SL+ ++L  N I  
Sbjct: 828 CGDRGGLVL-----SKSRSLTLLKLGSNGIASEG----VQILAANRSLISLDLSGNTIDV 878

Query: 402 EGAEKIA--------------------DALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
             A  +A                     AL ++R++T++D+  N + S G    AR L  
Sbjct: 879 VAARALAKNPRLASLNASSCGLDDAAVSALAESRSLTSLDVSKNRLFSPG----ARALAG 934

Query: 442 NSVITSLDLAYNPIGADGAKALSE 465
           N V+TSL++++N IG  GA AL+E
Sbjct: 935 NRVLTSLNISHNRIGFHGAAALAE 958



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 189/423 (44%), Gaps = 84/423 (19%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L++L+LS  PIGD G +    +L  +  +  L LS  ++ D GA A A+    N+ L  L
Sbjct: 602 LESLDLSDTPIGDRGAQ----LLASSTSLTSLNLSGNEISDAGAAAFAD----NTSLTSL 653

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I  +G    AEAL  N+ + SL ++ N  G  G  ALA     ++SL  L+L  
Sbjct: 654 NLRGNHISDAG----AEALGRNTVLTSLDVSANPIGNTGVQALAS----SRSLTSLNLCS 705

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
             I DEG+ AL S    R      LDI +N     GA   AE  +N ++L  +      +
Sbjct: 706 TWIEDEGVEALASNTVLRS-----LDISHNRF---GAQFAAELAQN-RTLASLKANHCSL 756

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            +  A+++A      R++T ++L  N I   G  AI R    N+ + SLDL+ NPIG  G
Sbjct: 757 TNNVAQQLASI----RSLTALELSSNLIDDAGVQAIVR----NASLRSLDLSQNPIGLGG 808

Query: 460 AKALS--------------------EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             AL+                     VL    ++  LKLG   I + G + +A     N 
Sbjct: 809 LHALALSRTLTSLDVSCIGCGDRGGLVLSKSRSLTLLKLGSNGIASEGVQILA----ANR 864

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC----LAQSF 555
           ++  LDL  N + D V +                  L  +  +  L  + C     A S 
Sbjct: 865 SLISLDLSGNTI-DVVAA----------------RALAKNPRLASLNASSCGLDDAAVSA 907

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
              + +LTS+D++ N +   GA A+A       +  +TSLN+++N +   G +AL ++  
Sbjct: 908 LAESRSLTSLDVSKNRLFSPGARALAG------NRVLTSLNISHNRIGFHGAAALAESTS 961

Query: 616 LVY 618
           L +
Sbjct: 962 LTF 964



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 160/381 (41%), Gaps = 109/381 (28%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L S+ +L +LNLSGN I D G         DN  +  L L    + D GA+A    L  
Sbjct: 619 LLASSTSLTSLNLSGNEISDAGAAAFA----DNTSLTSLNLRGNHISDAGAEA----LGR 670

Query: 273 NSILRVLELNNNMIDYSGFTSLA--------------------EALLENSTIRSLHLNGN 312
           N++L  L+++ N I  +G  +LA                    EAL  N+ +RSL ++ N
Sbjct: 671 NTVLTSLDVSANPIGNTGVQALASSRSLTSLNLCSTWIEDEGVEALASNTVLRSLDISHN 730

Query: 313 YGGALGA--------------------NALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
             GA  A                    N +A+ L   +SL  L L  N I D G++A++ 
Sbjct: 731 RFGAQFAAELAQNRTLASLKANHCSLTNNVAQQLASIRSLTALELSSNLIDDAGVQAIV- 789

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVA--------------------EYIKNCKSLLWI 392
               R   L  LD+  N I   G   +A                      +   +SL  +
Sbjct: 790 ----RNASLRSLDLSQNPIGLGGLHALALSRTLTSLDVSCIGCGDRGGLVLSKSRSLTLL 845

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR--------------- 437
            L  N I  EG + +A     NR++ ++DL GN I    A A+A+               
Sbjct: 846 KLGSNGIASEGVQILA----ANRSLISLDLSGNTIDVVAARALAKNPRLASLNASSCGLD 901

Query: 438 -----VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEF 490
                 L ++  +TSLD++ N + + GA+AL+      GN  + +L +   +IG  GA  
Sbjct: 902 DAAVSALAESRSLTSLDVSKNRLFSPGARALA------GNRVLTSLNISHNRIGFHGAAA 955

Query: 491 VADMLRYNNTISILDLRANGL 511
           +A+    + +++ LD RANG+
Sbjct: 956 LAE----STSLTFLDARANGI 972



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 44/289 (15%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            S+R L L G +    G     +GL+   G KL  LD+ +  I  +GA    + + +  S
Sbjct: 574 PSVRHLDLSGCT----GTAVSGAGLAYLAGRKLESLDLSDTPIGDRGA----QLLASSTS 625

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  +NL  N+I D GA   AD    N ++T+++L GN+I   GA A+ R    N+V+TSL
Sbjct: 626 LTSLNLSGNEISDAGAAAFAD----NTSLTSLNLRGNHISDAGAEALGR----NTVLTSL 677

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           D++ NPIG  G +AL+       ++ +L L    I   G E +A     N  +  LD+  
Sbjct: 678 DVSANPIGNTGVQALAS----SRSLTSLNLCSTWIEDEGVEALAS----NTVLRSLDISH 729

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLA 568
           N           G  F   A    ++    SL  N+      +AQ    +  +LT+++L+
Sbjct: 730 NRF---------GAQF---AAELAQNRTLASLKANHCSLTNNVAQQLASI-RSLTALELS 776

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
            N I D G  AI +      + ++ SL+L+ N +   G  AL  ++ L 
Sbjct: 777 SNLIDDAGVQAIVR------NASLRSLDLSQNPIGLGGLHALALSRTLT 819



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 154/400 (38%), Gaps = 141/400 (35%)

Query: 133 GAGTNLLSGFTGKLFRESKQTLNEFAKELRA----FSSVDMSGRNFGDEGLFFLAESLGY 188
           GAG   L+G   +    S   + +   +L A     +S+++SG    D G    A+    
Sbjct: 591 GAGLAYLAGRKLESLDLSDTPIGDRGAQLLASSTSLTSLNLSGNEISDAGAAAFAD---- 646

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL---------- 238
           N +   ++   N I+ AG +A    L  N  L +L++S NPIG+ GV+ L          
Sbjct: 647 NTSLTSLNLRGNHISDAGAEA----LGRNTVLTSLDVSANPIGNTGVQALASSRSLTSLN 702

Query: 239 -CDILVDNAGVERLQ----LSSVDLRDE--GAKAIAELLKNNSI---------------- 275
            C   +++ GVE L     L S+D+     GA+  AEL +N ++                
Sbjct: 703 LCSTWIEDEGVEALASNTVLRSLDISHNRFGAQFAAELAQNRTLASLKANHCSLTNNVAQ 762

Query: 276 -------LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN------------------ 310
                  L  LEL++N+ID +G     +A++ N+++RSL L+                  
Sbjct: 763 QLASIRSLTALELSSNLIDDAGV----QAIVRNASLRSLDLSQNPIGLGGLHALALSRTL 818

Query: 311 ----------GNYGG------------ALGANALA----KGLEGNKSLRELHLHGNSIGD 344
                     G+ GG             LG+N +A    + L  N+SL  L L GN+I  
Sbjct: 819 TSLDVSCIGCGDRGGLVLSKSRSLTLLKLGSNGIASEGVQILAANRSLISLDLSGNTIDV 878

Query: 345 EGIRAL--------------------MSGLSSRKGKLAVLDIGNNSISAKGA-------- 376
              RAL                    +S L+  +  L  LD+  N + + GA        
Sbjct: 879 VAARALAKNPRLASLNASSCGLDDAAVSALAESR-SLTSLDVSKNRLFSPGARALAGNRV 937

Query: 377 ------------FHVAEYIKNCKSLLWINLYMNDIGDEGA 404
                       FH A  +    SL +++   N IG+ GA
Sbjct: 938 LTSLNISHNRIGFHGAAALAESTSLTFLDARANGIGEAGA 977



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 112/269 (41%), Gaps = 76/269 (28%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ L++LN+ G  IGD G                                A LL  N  
Sbjct: 151 ASLPLESLNVKGAQIGDHG--------------------------------ARLLAANPS 178

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ L    NM       + A  L E+ T+ SL L  N  G  G  ALA     ++SL  L
Sbjct: 179 LKTL----NMAIGGIGAAGAANLAESRTLMSLDLTQNKIGDKGVQALA----ASRSLTNL 230

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN------------------NSISAKGAF 377
            +    + D G+ AL     +R   L  LD+GN                  N I+ KG  
Sbjct: 231 TVSNCLVTDIGLEAL-----ARSRTLTSLDLGNLVSATYDEAEQADFDRTANDITVKGTR 285

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            + +      SL  +++  N  GD G  ++A    ++RT+T +++   N+    A A+AR
Sbjct: 286 ALVQ----SPSLTSLSVQGNLCGDAGVLELA----KSRTLTHLNVAFTNMGPVSARALAR 337

Query: 438 VLKDNSVITSLDLAYN-PIGADGAKALSE 465
               N V+TSL++ +N  IG +GA  L++
Sbjct: 338 ----NPVLTSLNVRWNYDIGTEGALELTK 362


>gi|399497990|emb|CCG20323.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399497850|emb|CCG20253.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+K L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   E+  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKL--LNVNGNFISEEGVDELKE 489



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKEEFKLLNVNGNFISEEGVDELKEIFKKSPEVL 498



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 139/342 (40%), Gaps = 61/342 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
               G N   A    ++ +E ++  K L ++NL  N +G++G       L+    +  + 
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELF 248

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    
Sbjct: 249 LMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSST 308

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSL 540
           ++G+ G   + + L   + +  LDLR N    EV    C  LS         KH     +
Sbjct: 309 RVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEI 359

Query: 541 CINYL----QGAKCLAQSFK----------------------------VVNEALTSIDLA 568
            ++YL    +GA  +A S K                               + L  + L 
Sbjct: 360 YLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLG 419

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 420 ENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|440902621|gb|ELR53391.1| Protein NLRC5 [Bos grunniens mutus]
          Length = 1868

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 7/333 (2%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
            +GL  L   L +    EE+  + N +   G +   G L+    LKTL+LS  P+G   + 
Sbjct: 1510 KGLALLTSGLSHCHLLEELDLSNNQLGDEGTEVLLGALEGKCRLKTLDLSHLPLGGSTLA 1569

Query: 237  CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
             L   L     ++ L+LS  ++ D G   +++ L+  + L  L L++N I  +G   LA 
Sbjct: 1570 VLTQGLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNTGAQDLAA 1629

Query: 297  ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
             L     +R + L+ N  G  G   LA+ L   + L EL L  N++GD     L  GL  
Sbjct: 1630 VLPGLPELRKIDLSANGIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKGLPQ 1689

Query: 357  RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
                L VL + ++ +S +G   + + +  C  +  I+L  N +   G  +          
Sbjct: 1690 H---LRVLHLPSSHLSPEGVLSLGQALDGCPHVEEISLAENSLAG-GVPRFHQGFP---V 1742

Query: 417  ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
            +  +DL    I ++ A  +A        +  + L++N +G + A  L+ VL   G +  +
Sbjct: 1743 LRKLDLVSCEIDNQTAKPLAASFVLCLALEEIMLSWNLLGDEAAAELARVLPQMGRLKRM 1802

Query: 477  KLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
             L   QI A GA  +A+ L   + I ++ L  N
Sbjct: 1803 DLEKNQITAYGAWLLAEGLAQGSGIQVIRLWNN 1835



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 147/377 (38%), Gaps = 38/377 (10%)

Query: 246  AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            A + +L LS V+L D  +  +  LL + S L+   L ++ +   G   L   L     + 
Sbjct: 1467 ARLRQLSLSQVNLCDASSLLLQSLLLSLSELKNFRLTSSCVSSKGLALLTSGLSHCHLLE 1526

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
             L L+ N  G  G   L   LEG   L+ L L    +G   +  L  GL      L  L 
Sbjct: 1527 ELDLSNNQLGDEGTEVLLGALEGKCRLKTLDLSHLPLGGSTLAVLTQGLG-HMTLLQSLR 1585

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  ++I   G  H+++ ++   SL  ++L  N IG+ GA+ +A  L     +  IDL  N
Sbjct: 1586 LSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNTGAQDLAAVLPGLPELRKIDLSAN 1645

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             I   G + +A  L     +  L L  N +G   A  L++ L  H  +  L L    +  
Sbjct: 1646 GIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKGLPQH--LRVLHLPSSHLSP 1703

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
             G   +   L     +  + L  N L         G+  FH     L+ +   S  I+  
Sbjct: 1704 EGVLSLGQALDGCPHVEEISLAENSL-------AGGVPRFHQGFPVLRKLDLVSCEIDN- 1755

Query: 546  QGAKCLAQSFKVV--------------NEA-------------LTSIDLAFNEIRDDGAF 578
            Q AK LA SF +               +EA             L  +DL  N+I   GA+
Sbjct: 1756 QTAKPLAASFVLCLALEEIMLSWNLLGDEAAAELARVLPQMGRLKRMDLEKNQITAYGAW 1815

Query: 579  AIAQALKANEDVAVTSL 595
             +A+ L     + V  L
Sbjct: 1816 LLAEGLAQGSGIQVIRL 1832



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 136/360 (37%), Gaps = 65/360 (18%)

Query: 183  AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
             E+L      E +SF +     A  +A    L +  +LK L L+G+ I  +G+  L   L
Sbjct: 688  PETLAGCGQVENLSFKSRKCGDAFAEALSRSLPTMGSLKKLGLAGSKITAQGISHLVQAL 747

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
                 +E +      L+D     I E+L     L+ L+L+ N +  S   SL +  +   
Sbjct: 748  PFCPQLEEVSFQDNQLKDREVLNIVEVLSCLPRLQKLDLSRNNVSVSTLLSLTKVAVTCP 807

Query: 303  TIRSLH-------------------------LNGNYG-------------------GALG 318
            TIR L                          L GN                     G   
Sbjct: 808  TIRMLQVRETDLIFLLSPPTETDPELQGDPDLQGNANQRKEAQRRSLALRLQKCQLGVHD 867

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
               L   L     L E+ L GN + D+G + LM+  + +   +  LD+ +N +S  G   
Sbjct: 868  VEVLIAQLREGPQLDEVDLSGNQLKDKGCQ-LMAEAAPQLHIMKKLDLSDNELSVAGVLG 926

Query: 379  VAEYIKNCKSL--LWINLYMNDI---------GDEGAEKIA---DAL------KQNRTIT 418
            V   +  C++L  L I+L    +           EG +K A   D+L      + +    
Sbjct: 927  VLSVVNTCQTLTELHISLLHKTVVFTFAPELEEQEGIQKRATFPDSLMFQMSSEPSLRSP 986

Query: 419  TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             I L    + ++    + + L  +  ++ LDL+ N +G +G   L+ +L   G++ +L L
Sbjct: 987  RIRLTHCALQAQRLELLCKALGGSCRLSHLDLSGNALGDEGVALLARLLPGLGSLQSLNL 1046



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 90/238 (37%), Gaps = 43/238 (18%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
            +E      VD+SG    D+G   +AE+       +++  + N ++ AG+     V+ +  
Sbjct: 876  REGPQLDEVDLSGNQLKDKGCQLMAEAAPQLHIMKKLDLSDNELSVAGVLGVLSVVNTCQ 935

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L  L++S   +    V      L +  G+++                            
Sbjct: 936  TLTELHISL--LHKTVVFTFAPELEEQEGIQK---------------------------- 965

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA---LAKGLEGNKSLREL 335
                    D   F   +E  L +  IR  H       AL A     L K L G+  L  L
Sbjct: 966  ---RATFPDSLMFQMSSEPSLRSPRIRLTHC------ALQAQRLELLCKALGGSCRLSHL 1016

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
             L GN++GDEG+ AL++ L    G L  L++  N +S +G   + +     + LL + 
Sbjct: 1017 DLSGNALGDEGV-ALLARLLPGLGSLQSLNLSENHLSLEGVCSLTQCFSTLRWLLHLE 1073



 Score = 39.7 bits (91), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 71/358 (19%), Positives = 125/358 (34%), Gaps = 43/358 (12%)

Query: 151  KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
            K  +  FA EL     +      F D  +F ++        +  +      + A  ++  
Sbjct: 947  KTVVFTFAPELEEQEGIQKRA-TFPDSLMFQMSSEPSLR--SPRIRLTHCALQAQRLELL 1003

Query: 211  DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
               L  +  L  L+LSGN +GDEGV  L  +L     ++ L LS   L  EG  ++ +  
Sbjct: 1004 CKALGGSCRLSHLDLSGNALGDEGVALLARLLPGLGSLQSLNLSENHLSLEGVCSLTQCF 1063

Query: 271  KNNSILRVLELNN---NMI---DYSGFTSLAEALL------------ENSTIRSLHLNGN 312
                 L  LE ++   ++I   D  G   LA   L            +    RS  L   
Sbjct: 1064 STLRWLLHLEFSSASQHVILRGDKRGRDLLAAGSLPEFRAGTRLGFGQRHVPRSFCLKEC 1123

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM---------------SGLSSR 357
                L  + L K LE      E+ L    + D+ +  L+                     
Sbjct: 1124 QLEPLSLSYLCKSLEKCPGPLEVQLSCEVLSDQSLETLLHHLPQLPQLSLLQLSQMQLPP 1183

Query: 358  KGKLAVLDIGN-----NSISAKGAFHVAEYIKNCKSLLWINLYMNDIG--DEGAEKIADA 410
            +  L + D+ +       +  +   H+  ++++ +       +  D G   E  E +   
Sbjct: 1184 ESPLLLADLFSLCPQVQKVDLRSLRHLTLHLRSSEEQEDRCCWFTDCGLRQEHVEPLCGL 1243

Query: 411  LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            L +   +  +DL  N +   G   +   L    +  SLDL++N +  +    L E L 
Sbjct: 1244 LSKCEDLHQLDLSANLLGDDGLRCLLECLPKVPISGSLDLSHNSMSQESVLCLVEALP 1301


>gi|355561748|gb|EHH18380.1| hypothetical protein EGK_14960 [Macaca mulatta]
          Length = 501

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSH 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     L+    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLN--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSHNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL N+S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-NHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 4/193 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L  S VD  D+ A+ I   L ++ +L  L+L++N+I   G    A+ LL +S +R L+L
Sbjct: 285 KLTRSKVD--DDKARIIIRSLLDHPVLEELDLSHNLIGDRGARGAAK-LLNHSRLRVLNL 341

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N   A GA +LA  L  N +L  L+L  N I DEG +AL   L + K  L  L +G N
Sbjct: 342 ANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKC-LTTLHLGGN 400

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +S   A  +++ +    +L  INL  N IG +G +++ + +  N+T+   DL  +++  
Sbjct: 401 ELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQ 460

Query: 430 KGASAIARVLKDN 442
           +    I + L  N
Sbjct: 461 ESEYLIGQALYAN 473



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+ +N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSHNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLNHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 445

Query: 499 NTISILDLRANGLRDE 514
            T+   DLR + +  E
Sbjct: 446 KTLLEFDLRLSDVAQE 461



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 10/218 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSHNLIGDRGARGAAKLLN-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKCLAQSFKVVNEA 561
            L+LR N + DE      G +  H A+ + K +    L  N L +    L      +N  
Sbjct: 366 SLNLRLNCIEDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT 419

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 420 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L  +  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARGAAKLLNHS-RLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|195621094|gb|ACG32377.1| ran GTPase activating protein [Zea mays]
          Length = 541

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 215/495 (43%), Gaps = 70/495 (14%)

Query: 34  PLSFAL---PFSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIAS 90
           P +F++   P S + R   + R+    +      R+ R + +Q   +NA T   ++++  
Sbjct: 9   PRTFSIKLWPPSESTRIMLVDRMTNNLSTESIFSRKYRLLGKQEAHENAKT---IEELCF 65

Query: 91  FVV-------PAGVFVSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFT 143
            +        P G   SA  +  K   K+++    +  + TAE +   V A T L+S  T
Sbjct: 66  ALADEHFREEPDGDGSSAVQLYAKETSKMMLEVLKKGPRTTAE-LEAPV-ADTPLVSADT 123

Query: 144 ------GKLF----RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFF---LAESLGYNQ 190
                 GK       E+K+ L+   K   ++  +  S R+FG         + ES+    
Sbjct: 124 VLDISGGKRAFIEADEAKELLSPLTKPGNSYKRICFSNRSFGIGAANVAGPILESVKNQL 183

Query: 191 TAEEVS-FAANGITAAGI-------KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           T  ++S F A       +       KA DG +     L+ LN+S N +G++GV+   ++L
Sbjct: 184 TEVDISDFVAGRSEDEALDVMRIFSKALDGSV-----LRYLNISDNALGEKGVRAFSELL 238

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM----------------- 285
                +E L + +  + +E AKA++EL+     L+VL  +NNM                 
Sbjct: 239 KSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSP 298

Query: 286 -----------IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
                      I   G  +L+EAL   + ++ L L  N  G     AL++ L     L E
Sbjct: 299 NVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSETLPKLPDLVE 358

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L   ++ ++G  A+   L     +L VL+I  N I+AK A  +AE +   +SL  + L
Sbjct: 359 LYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPDLAECLAVMQSLKKLTL 418

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N++ D GA  IA +L+   + +  +D+  N +   GA   AR + +      L++  N
Sbjct: 419 AENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGARCFARAVANKPDFVQLNINGN 478

Query: 454 PIGADGAKALSEVLK 468
            I  +G   + E+LK
Sbjct: 479 FISDEGVDEVKEILK 493



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 140/288 (48%), Gaps = 13/288 (4%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K L+G+  LR L++  N++G++G+RA    L S++  L  L + N+ IS + A  ++E
Sbjct: 207 FSKALDGS-VLRYLNISDNALGEKGVRAFSELLKSQES-LEELYVMNDGISEEAAKALSE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I   + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A++  L  
Sbjct: 265 LIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGT 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN-T 500
            + +  LDL  N  G D   ALSE L    ++  L L    +   G   +A  L+ +   
Sbjct: 325 CTRLKKLDLRDNLFGVDAGLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQ 384

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKVV 558
           + +L++  N +          L+   + + SLK +   +L  N L+  GA  +A+S +  
Sbjct: 385 LEVLEIAGNEIN---AKAAPDLAECLAVMQSLKKL---TLAENELKDNGAVIIAKSLEDG 438

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           +  L  +D++ N ++  GA   A+A+    D     LN+  NF++  G
Sbjct: 439 HSDLKELDVSTNMLQRVGARCFARAVANKPD--FVQLNINGNFISDEG 484



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 30/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG  ++AE +  +   E    +A  I + G  A    L +   LK L+L  N  G + 
Sbjct: 283 GDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDA 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L + L     +  L LS ++L ++G  AIA+ LK +++ L VLE+  N I+      
Sbjct: 343 GLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPD 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLREL----------------- 335
           LAE L    +++ L L  N     GA  +AK LE G+  L+EL                 
Sbjct: 403 LAECLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGARCFAR 462

Query: 336 -----------HLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                      +++GN I DEG+  +   L + K  L VL
Sbjct: 463 AVANKPDFVQLNINGNFISDEGVDEVKEILKAGKKSLDVL 502


>gi|330845713|ref|XP_003294718.1| hypothetical protein DICPUDRAFT_159756 [Dictyostelium purpureum]
 gi|325074771|gb|EGC28760.1| hypothetical protein DICPUDRAFT_159756 [Dictyostelium purpureum]
          Length = 920

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 180/398 (45%), Gaps = 36/398 (9%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           SK    EF +  +         +    E    +A  L  N T   +SF  + +  + I++
Sbjct: 465 SKNLFTEFFEASKYMQYFRFYQKWVSPENFNAIANCLRLNNTITHLSFRHSNLEDSSIES 524

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L  N  ++ ++  GN + D     L  +L++N  ++ + L   ++  EG  A+ + 
Sbjct: 525 VISALSDNTTIENIDFRGNKLADASAIKLAQVLLNNKSLKIIDLFYNNIGPEGGAALCKA 584

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGAL---------- 317
           LK N  L  L +  N I  S    L ++L +NS+++ +HL+   +  GA+          
Sbjct: 585 LKTNKTLEKLYIRWNHISGSSAVCLGDSLSKNSSLKCIHLDRIDDQSGAVLFEAIGNSTT 644

Query: 318 ----------------GANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
                            A+AL K L + N +L +L+   N  G+  I ++ S L      
Sbjct: 645 SVLSEINLSDCALKSGTASALGKTLSKKNSTLLDLNFKNNQFGN-CIVSIASALQIN-NT 702

Query: 361 LAVLDIGNNSISAK-GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ---NRT 416
           L  L++ +N IS + G + +AE   +  S+  ++L  N +G+  AE IA AL       +
Sbjct: 703 LTKLNLSDNRISDQFGGWELAEAFSHNSSITSLSLSTNQLGNRFAEGIARALTNGCVKSS 762

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  +D+ GN I  +GA  IA  L+DN  +  L+L  N +       ++E LK +  +  L
Sbjct: 763 LKLLDISGNQIDYEGARYIAEALRDNKTLKLLNLNQNKLSPQFGTLIAESLKSNQTLIHL 822

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISI-LDLRANGLRD 513
           +L +  +G  G+  +A++L+ N T  + L+L  N + D
Sbjct: 823 ELSYTGLGDKGSLPIANLLKNNGTHLVRLNLNENQITD 860



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 192/436 (44%), Gaps = 48/436 (11%)

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
           F    ++     A    L+ N  +  L+   + + D  ++ +   L DN  +E +     
Sbjct: 484 FYQKWVSPENFNAIANCLRLNNTITHLSFRHSNLEDSSIESVISALSDNTTIENIDFRGN 543

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            L D  A  +A++L NN  L++++L  N I   G  +L +AL  N T+  L++  N+   
Sbjct: 544 KLADASAIKLAQVLLNNKSLKIIDLFYNNIGPEGGAALCKALKTNKTLEKLYIRWNHISG 603

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL-SSRKGKLAVLDIGNNSISAKG 375
             A  L   L  N SL+ +HL  + I D+    L   + +S    L+ +++ + ++ +  
Sbjct: 604 SSAVCLGDSLSKNSSLKCIHL--DRIDDQSGAVLFEAIGNSTTSVLSEINLSDCALKSGT 661

Query: 376 AFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK-GAS 433
           A  + + + K   +LL +N   N  G+     IA AL+ N T+T ++L  N I  + G  
Sbjct: 662 ASALGKTLSKKNSTLLDLNFKNNQFGN-CIVSIASALQINNTLTKLNLSDNRISDQFGGW 720

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK---FHGNINTLKLGWCQIGASGAEF 490
            +A     NS ITSL L+ N +G   A+ ++  L       ++  L +   QI   GA +
Sbjct: 721 ELAEAFSHNSSITSLSLSTNQLGNRFAEGIARALTNGCVKSSLKLLDISGNQIDYEGARY 780

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +A+ LR N T+ +L+L  N L                                  Q    
Sbjct: 781 IAEALRDNKTLKLLNLNQNKLSP--------------------------------QFGTL 808

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK-----F 605
           +A+S K  N+ L  ++L++  + D G+  IA  LK N    +  LNL  N +T      F
Sbjct: 809 IAESLK-SNQTLIHLELSYTGLGDKGSLPIANLLK-NNGTHLVRLNLNENQITDPTGHVF 866

Query: 606 GQSALTDAKDLVYEMS 621
            ++ L+++   V ++S
Sbjct: 867 AEALLSNSYIQVLDLS 882



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 35/272 (12%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE-GVKCLCDILVDNAG 247
           N T  +++F  N      I +    LQ N  L  LNLS N I D+ G   L +    N+ 
Sbjct: 673 NSTLLDLNFKNNQF-GNCIVSIASALQINNTLTKLNLSDNRISDQFGGWELAEAFSHNSS 731

Query: 248 VERLQLSSVDLRDEGAKAIAELLKN---NSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           +  L LS+  L +  A+ IA  L N    S L++L+++ N IDY G   +AEAL +N T+
Sbjct: 732 ITSLSLSTNQLGNRFAEGIARALTNGCVKSSLKLLDISGNQIDYEGARYIAEALRDNKTL 791

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           + L+LN N         +A+ L+ N++L  L L    +GD                    
Sbjct: 792 KLLNLNQNKLSPQFGTLIAESLKSNQTLIHLELSYTGLGD-------------------- 831

Query: 365 DIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
                    KG+  +A  +KN  + L+ +NL  N I D      A+AL  N  I  +DL 
Sbjct: 832 ---------KGSLPIANLLKNNGTHLVRLNLNENQITDPTGHVFAEALLSNSYIQVLDLS 882

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N    +   +  R +K N  IT+L  +  P+
Sbjct: 883 FNQFSYRVKESFERSMKSNLSITNLSFSSVPL 914


>gi|399497956|emb|CCG20306.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|399498048|emb|CCG20352.1| Ran GTPase activating protein 2 [Solanum tarijense]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      +AVL++  N I+ +
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVLEMAGNDITVE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +I+ AL+++R +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQISKALERHRHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  ++++ +
Sbjct: 383 PSVAVLEMAGNDITVEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQISKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -RHRHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 119/302 (39%), Gaps = 51/302 (16%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGD----------EGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS             +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKESGNSYSKICFSNRSFSIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH       
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KH------- 353

Query: 542 INYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                             E LT I L++  + D+GA AIA ALK +   +V  L +A N 
Sbjct: 354 ------------------ENLTEIYLSYLNLEDEGAIAIANALK-DSAPSVAVLEMAGND 394

Query: 602 LT 603
           +T
Sbjct: 395 IT 396


>gi|399498064|emb|CCG20360.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +DL  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +DL+ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ L  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEVL 498



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  ++L++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDLSSNALRRAGARVL 459


>gi|344171232|emb|CCA83709.1| leucine-rich-repeat type III effector protein (GALA3) [blood
           disease bacterium R229]
          Length = 454

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 165/348 (47%), Gaps = 46/348 (13%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +S+DM G   GDEG  +LA     N     +    N I  AG+ A    L  N AL +L
Sbjct: 108 LTSLDMHGNRIGDEGAKYLAA----NTRLAVLDVGDNMIGDAGVIA----LARNTALTSL 159

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N  G +G++ L      N  +  L ++   +  EGA+A+A     N+ L  L++  
Sbjct: 160 HLDRNKFGLDGIRALA----ANTKLTTLNVNKNAIGPEGAEALAA----NTTLTTLDIEE 211

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G    A+ L  + T  +L++  N  G  G  ALA     NK+L  L +  N IG
Sbjct: 212 NAIGDRG----AQWLAASKTRIALNVRTNEIGRAGGFALAV----NKTLVSLAVGYNGIG 263

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            E + A+ +       +L  LD+    I    A   A    N  SL+ +N+  N  GDEG
Sbjct: 264 SEAVIAMAA-----NKRLISLDVEYTGIGTAAAEVAAALAANT-SLVCLNVGANGFGDEG 317

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A  +A     ++TITT+++  N I   GA A+A     + +ITSLDLA N IGA G KAL
Sbjct: 318 ARLLA----ASKTITTLNVSYNQIGRDGALALAA----SRMITSLDLAGNIIGAAGIKAL 369

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           ++    +  + TL L   QI   G E +A     N T++ LD+  N L
Sbjct: 370 AD----NRMLATLNLSKSQIAHEGVEALA----TNTTLATLDVSCNHL 409



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 162/339 (47%), Gaps = 62/339 (18%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           LLE   +R L++NG   GA GA  LA     + +L  L +HGN IGDEG + L +     
Sbjct: 79  LLELPLVR-LNINGCRLGAKGAQRLAN----HPTLTSLDMHGNRIGDEGAKYLAA----- 128

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             +LAVLD+G+N I   G   +A       +L  ++L  N  G +G      AL  N  +
Sbjct: 129 NTRLAVLDVGDNMIGDAGVIALARN----TALTSLHLDRNKFGLDGIR----ALAANTKL 180

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL-SEVLKFHGNINTL 476
           TT+++  N I  +GA A+A     N+ +T+LD+  N IG  GA+ L +   +   N+ T 
Sbjct: 181 TTLNVNKNAIGPEGAEALAA----NTTLTTLDIEENAIGDRGAQWLAASKTRIALNVRT- 235

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE--VCSGCN----GLSFFHSAIY 530
                +IG +G   +A     N T+  L +  NG+  E  +    N     L   ++ I 
Sbjct: 236 ----NEIGRAGGFALA----VNKTLVSLAVGYNGIGSEAVIAMAANKRLISLDVEYTGIG 287

Query: 531 SLKHMLFYS-------LCINY------LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
           +    +  +       +C+N        +GA+ LA S     + +T++++++N+I  DGA
Sbjct: 288 TAAAEVAAALAANTSLVCLNVGANGFGDEGARLLAAS-----KTITTLNVSYNQIGRDGA 342

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
            A+A +        +TSL+LA N +   G  AL D + L
Sbjct: 343 LALAASRM------ITSLDLAGNIIGAAGIKALADNRML 375


>gi|356575811|ref|XP_003556030.1| PREDICTED: RAN GTPase-activating protein 2-like [Glycine max]
          Length = 532

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 216 LNLSDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAALAVCELIPFTEKLKVLHFH 275

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  I   G  +L++AL   + ++ L L  N  
Sbjct: 276 NNMTGDEGALAIAEVVKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLRDNML 335

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  +L+K L     LRE++L   ++ D+G  A++  L+     L VL++  N I+A 
Sbjct: 336 GVEGGVSLSKALTKQAELREVYLSYLNLEDDGAIAIVDALTEAAPHLEVLEMSGNDITAD 395

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  +   + L  +NL  N++ DEGA  I  A++ +  +  IDL  N I   GA  
Sbjct: 396 AAPAIAACLAAKQFLTKLNLSENELKDEGANLITKAIEGHVQLKEIDLSANQISRAGAQQ 455

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A  +   +    L++  N I  +G   L ++ K
Sbjct: 456 LAVTVVQKADFKLLNINGNFISDEGIDELKDIFK 489



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 153/334 (45%), Gaps = 22/334 (6%)

Query: 290 GFTSLAEALLEN--STIRSLHLNGNYGGALGANAL------AKGLEGNKSLRELHLHGNS 341
           G   +AE +L +    ++ + L+    G   A AL      +  LEG+  LR L+L  N+
Sbjct: 164 GAAQIAEPILTSIKDQLKEVDLSDFIAGRSEAEALDVMKIFSTALEGS-VLRSLNLSDNA 222

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +G++G+RA  + L S+K  L  L + N+ IS + A  V E I   + L  ++ + N  GD
Sbjct: 223 LGEKGVRAFGALLKSQKC-LEELYLMNDGISKEAALAVCELIPFTEKLKVLHFHNNMTGD 281

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA  IA+ +K++  +         I S+G  A++  L + + +  LDL  N +G +G  
Sbjct: 282 EGALAIAEVVKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLRDNMLGVEGGV 341

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-RYNNTISILDLRANGLRDEVCSGCN 520
           +LS+ L     +  + L +  +   GA  + D L      + +L++  N +  +      
Sbjct: 342 SLSKALTKQAELREVYLSYLNLEDDGAIAIVDALTEAAPHLEVLEMSGNDITADAAPAIA 401

Query: 521 GLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                   +  L      +L  N L  +GA  + ++ +  +  L  IDL+ N+I   GA 
Sbjct: 402 ACLAAKQFLTKL------NLSENELKDEGANLITKAIE-GHVQLKEIDLSANQISRAGAQ 454

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
            +A  +    D  +  LN+  NF++  G   L D
Sbjct: 455 QLAVTVVQKADFKL--LNINGNFISDEGIDELKD 486



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 29/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  I + G  A    L +   LK L+L  N +G EG
Sbjct: 280 GDEGALAIAEVVKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLRDNMLGVEG 339

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L   A +  + LS ++L D+GA AI + L   +  L VLE++ N I      +
Sbjct: 340 GVSLSKALTKQAELREVYLSYLNLEDDGAIAIVDALTEAAPHLEVLEMSGNDITADAAPA 399

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           +A  L     +  L+L+ N     GAN + K +EG+  L+E                   
Sbjct: 400 IAACLAAKQFLTKLNLSENELKDEGANLITKAIEGHVQLKEIDLSANQISRAGAQQLAVT 459

Query: 335 ---------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
                    L+++GN I DEGI  L          L  LD
Sbjct: 460 VVQKADFKLLNINGNFISDEGIDELKDIFKKSPDMLGPLD 499


>gi|355710190|gb|EHH31654.1| hypothetical protein EGK_12770 [Macaca mulatta]
          Length = 1044

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 768  VGHLKLTFCSVGPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 824

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 825  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 883

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 884  NNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 943

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G   L+E LK + ++  LKL    I   G
Sbjct: 944  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLG 1003

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1004 AEALLQALERNDTILEVWLRGN 1025



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 118/243 (48%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 779  GPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 834

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 835  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARV 894

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 895  LAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 954

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N L+DE VC    GL        SLK +   + CI YL GA+ L Q
Sbjct: 955  LAKNVMLEELCLEENHLQDEGVCCLAEGL----KRNSSLKILKLSNNCITYL-GAEALLQ 1009

Query: 554  SFK 556
            + +
Sbjct: 1010 ALE 1012



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 8/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G       AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 765  GLNVGHLKLTFCSVGPAECAALAF--VLRHLRQPVALQLDYNSVGDIGVEQLLPCL---- 818

Query: 247  GVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            GV + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       
Sbjct: 819  GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 878

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +L L  N+  A GA  LA+GL GN SL+ L   GN +GDEG +AL   L   +  L  L 
Sbjct: 879  ALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQS-LRWLS 937

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N
Sbjct: 938  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNN 997

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I   GA A+ + L+ N  I  + L  N    + A  L
Sbjct: 998  CITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 85/164 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 867  MAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEA 926

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G   LAE L  N
Sbjct: 927  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRN 986

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E
Sbjct: 987  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLE 1030



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 78/149 (52%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 877  FLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWL 936

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+DEG   +AE LK NS L++L+L+N
Sbjct: 937  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSN 996

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL  N TI  + L GN
Sbjct: 997  NCITYLGAEALLQALERNDTILEVWLRGN 1025



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 830  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 889

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  NA ++ L      + DEGA+A+AE                        
Sbjct: 890  AGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAE------------------------ 925

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                AL ++ ++R L L GN  G++GA ALA  L  N  L EL L  N + DEG+  L  
Sbjct: 926  ----ALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAE 981

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            GL  R   L +L + NN I+  GA  + + ++   ++L + L  N    E A+K+
Sbjct: 982  GL-KRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035


>gi|399497988|emb|CCG20322.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFAKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNCISEEGVDELKEIFK 492



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFAKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMTGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNCISEEGVDELKE 489



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+   A+ L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFAKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S   + K  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNCISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNCISEEGVDELKEIFKKSPEML 498



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 126/308 (40%), Gaps = 49/308 (15%)

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           S G +  R     L++ K +L  +D+     G N   A    ++        +L ++NL 
Sbjct: 163 SFGIDAARIAGPILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLS 222

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N +G++G    A  L+    +  + L  + I  + A+A++ ++     +  L    N  
Sbjct: 223 DNALGEKGVRAFAKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMT 282

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           G +GA A++E++K    +   +    ++G+ G   + + L   + +  LDLR N    EV
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 516 -CSGCNGLSFFHSAIYSLKHMLFYSLCINYL----QGAKCLAQSFK-------------- 556
               C  LS         KH     + ++YL    +GA  +A + K              
Sbjct: 343 GLVLCKALS---------KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGN 393

Query: 557 --------------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
                            + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L
Sbjct: 394 DITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNAL 451

Query: 603 TKFGQSAL 610
            + G   L
Sbjct: 452 RRAGARVL 459


>gi|156366884|ref|XP_001627151.1| predicted protein [Nematostella vectensis]
 gi|156214052|gb|EDO35051.1| predicted protein [Nematostella vectensis]
          Length = 307

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 131/268 (48%), Gaps = 32/268 (11%)

Query: 142 FTGKLFRESKQTLNEF--AKELRAFSS--VDMSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
           F   +++++ +  N F  +K +R + +  +D+     GD+G   LA  L   + +  +  
Sbjct: 5   FIVAMYKDACKQYNTFPVSKFIRQYPTGVIDLKHYGVGDKGALALATVLKQGEVSS-LCL 63

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
             NGI   G++    +L +N  +K+L+LSGNP+    + CL  +L DN  +  L LS+  
Sbjct: 64  HDNGIGIEGLRCLSTMLTTNACIKSLDLSGNPVNKSSIACLGRMLSDNIFLYDLNLSTCG 123

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT------------------------- 292
           ++ + A A+ E L+ ++ ++ L L+ N +   G T                         
Sbjct: 124 IQGKNAVALLEALRYHTSIKTLNLSYNDLGLEGATLIGLVLRDNKRLHYLDISWNNIRDT 183

Query: 293 -SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +AE L+ N+ +  L L+ N  G  GA  L++ L  N +LREL++ G  IG  G++ L+
Sbjct: 184 DKIAEGLVTNTCLEILDLSRNGFGDRGAENLSQALLQNLTLRELNVSGACIGLAGVK-LI 242

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           +G   R   L VL IGNN +  +GA  +
Sbjct: 243 AGSLKRNKVLEVLKIGNNPMLPEGAHEL 270



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 20/242 (8%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNSILRVLELNNN 284
           +GD+G   L  +L      ++ ++SS+ L D     EG + ++ +L  N+ ++ L+L+ N
Sbjct: 41  VGDKGALALATVL------KQGEVSSLCLHDNGIGIEGLRCLSTMLTTNACIKSLDLSGN 94

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA--KGLEGNKSLRELHLHGNSI 342
            ++ S    L   L +N  +  L+L+    G  G NA+A  + L  + S++ L+L  N +
Sbjct: 95  PVNKSSIACLGRMLSDNIFLYDLNLS--TCGIQGKNAVALLEALRYHTSIKTLNLSYNDL 152

Query: 343 GDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           G EG  A + GL  R  K L  LDI  N+I  +    +AE +     L  ++L  N  GD
Sbjct: 153 GLEG--ATLIGLVLRDNKRLHYLDISWNNI--RDTDKIAEGLVTNTCLEILDLSRNGFGD 208

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GAE ++ AL QN T+  +++ G  I   G   IA  LK N V+  L +  NP+  +GA 
Sbjct: 209 RGAENLSQALLQNLTLRELNVSGACIGLAGVKLIAGSLKRNKVLEVLKIGNNPMLPEGAH 268

Query: 462 AL 463
            L
Sbjct: 269 EL 270



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 1/157 (0%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+    V+D+ +  +  KGA  +A  +K    +  + L+ N IG EG   ++  L  N  
Sbjct: 27  RQYPTGVIDLKHYGVGDKGALALATVLKQ-GEVSSLCLHDNGIGIEGLRCLSTMLTTNAC 85

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I ++DL GN ++    + + R+L DN  +  L+L+   I    A AL E L++H +I TL
Sbjct: 86  IKSLDLSGNPVNKSSIACLGRMLSDNIFLYDLNLSTCGIQGKNAVALLEALRYHTSIKTL 145

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            L +  +G  GA  +  +LR N  +  LD+  N +RD
Sbjct: 146 NLSYNDLGLEGATLIGLVLRDNKRLHYLDISWNNIRD 182



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           V++L +  +   G  +LA  +L+   + SL L+ N  G  G   L+  L  N  ++ L L
Sbjct: 33  VIDLKHYGVGDKGALALA-TVLKQGEVSSLCLHDNGIGIEGLRCLSTMLTTNACIKSLDL 91

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            GN +    I  L   LS     L  L++    I  K A  + E ++   S+  +NL  N
Sbjct: 92  SGNPVNKSSIACLGRMLSDNI-FLYDLNLSTCGIQGKNAVALLEALRYHTSIKTLNLSYN 150

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           D+G EGA  I   L+ N+ +  +D+  NNI  +    IA  L  N+ +  LDL+ N  G 
Sbjct: 151 DLGLEGATLIGLVLRDNKRLHYLDISWNNI--RDTDKIAEGLVTNTCLEILDLSRNGFGD 208

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            GA+ LS+ L  +  +  L +    IG +G + +A  L+ N  + +L +  N +  E
Sbjct: 209 RGAENLSQALLQNLTLRELNVSGACIGLAGVKLIAGSLKRNKVLEVLKIGNNPMLPE 265



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
              S+D+SG       +  L   L  N    +++ +  GI      A    L+ + ++KT
Sbjct: 85  CIKSLDLSGNPVNKSSIACLGRMLSDNIFLYDLNLSTCGIQGKNAVALLEALRYHTSIKT 144

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNLS N +G EG   +  +L DN  +  L +S  ++RD     IAE L  N+ L +L+L+
Sbjct: 145 LNLSYNDLGLEGATLIGLVLRDNKRLHYLDISWNNIRD--TDKIAEGLVTNTCLEILDLS 202

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N     G  +L++ALL+N T+R L+++G   G  G   +A  L+ NK L  L +  N +
Sbjct: 203 RNGFGDRGAENLSQALLQNLTLRELNVSGACIGLAGVKLIAGSLKRNKVLEVLKIGNNPM 262

Query: 343 GDEGIRALM 351
             EG   L+
Sbjct: 263 LPEGAHELL 271



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 5/248 (2%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D+GA A+A +LK   +   L L++N I   G   L+  L  N+ I+SL L+GN       
Sbjct: 43  DKGALALATVLKQGEV-SSLCLHDNGIGIEGLRCLSTMLTTNACIKSLDLSGNPVNKSSI 101

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L + L  N  L +L+L    I  +   AL+  L      +  L++  N +  +GA  +
Sbjct: 102 ACLGRMLSDNIFLYDLNLSTCGIQGKNAVALLEALRYHT-SIKTLNLSYNDLGLEGATLI 160

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
              +++ K L ++++  N+I D   +KIA+ L  N  +  +DL  N    +GA  +++ L
Sbjct: 161 GLVLRDNKRLHYLDISWNNIRD--TDKIAEGLVTNTCLEILDLSRNGFGDRGAENLSQAL 218

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA-EFVADMLRYN 498
             N  +  L+++   IG  G K ++  LK +  +  LK+G   +   GA E +   +R  
Sbjct: 219 LQNLTLRELNVSGACIGLAGVKLIAGSLKRNKVLEVLKIGNNPMLPEGAHELLRCAMRSP 278

Query: 499 NTISILDL 506
            T++ L L
Sbjct: 279 MTLAELHL 286


>gi|198432566|ref|XP_002119235.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 535

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 5/266 (1%)

Query: 161 LRAFSSVDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR     D+  R+   G  G   +A SL  N    ++  + N + A G  A   +L+ N 
Sbjct: 132 LRHMQDQDLIMRHHGLGPAGAKAIAVSLVSNTRILKLDLSDNWLNAQGGVAIAEMLKENC 191

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +  L LS N +G  G   LC+ L +N  +  + LS  D  D  A  I+E++ +   L  
Sbjct: 192 YISELILSDNHLGFGGAAALCETLQENVTITHVTLSGNDFDDGTAVPISEIIMSTQKLEQ 251

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N+   +G   L  A+ EN++I+ L+L+ N+    GA +LAKG+  N  L+++ L 
Sbjct: 252 LDLSCNLFGEAGGELLGPAISENTSIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLS 311

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G EG  AL   L +    L  LD+ NN IS +GA  +A+ + + ++L  + +  N 
Sbjct: 312 WNGLGLEGASALGDALRN-NNVLEELDVSNNRISTEGAILLAKGLLSNETLRILRIGKNP 370

Query: 399 IGDEGAEKIADALKQN--RTITTIDL 422
           I   G   I  AL+QN    + T+DL
Sbjct: 371 IQSAGGFGILTALRQNGGSVVETLDL 396



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 10/274 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           ++L +  + +G  G +A+   L S   ++  LD+ +N ++A+G   +AE +K    +  +
Sbjct: 138 QDLIMRHHGLGPAGAKAIAVSLVSNT-RILKLDLSDNWLNAQGGVAIAEMLKENCYISEL 196

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N +G  GA  + + L++N TIT + L GN+     A  I+ ++     +  LDL+ 
Sbjct: 197 ILSDNHLGFGGAAALCETLQENVTITHVTLSGNDFDDGTAVPISEIIMSTQKLEQLDLSC 256

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N  G  G + L   +  + +I  L L W     +GA  +A  +  N  +  +DL  NGL 
Sbjct: 257 NLFGEAGGELLGPAISENTSIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLSWNGL- 315

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFN 570
                G  G S    A+ +   +    +  N +  +GA  LA+   + NE L  + +  N
Sbjct: 316 -----GLEGASALGDALRNNNVLEELDVSNNRISTEGAILLAKGL-LSNETLRILRIGKN 369

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
            I+  G F I  AL+ N    V +L+L++  + K
Sbjct: 370 PIQSAGGFGILTALRQNGGSVVETLDLSDVVVNK 403



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 79/159 (49%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  +E    + V +SG +F D     ++E +   Q  E++  + N    AG +     
Sbjct: 211 LCETLQENVTITHVTLSGNDFDDGTAVPISEIIMSTQKLEQLDLSCNLFGEAGGELLGPA 270

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +  N ++K LNLS N     G   L   +  N  ++++ LS   L  EGA A+ + L+NN
Sbjct: 271 ISENTSIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLSWNGLGLEGASALGDALRNN 330

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++L  L+++NN I   G   LA+ LL N T+R L +  N
Sbjct: 331 NVLEELDVSNNRISTEGAILLAKGLLSNETLRILRIGKN 369



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +   +++S  +F   G   LA+ +G N   +++  + NG+   G  A    L++N  L+ 
Sbjct: 276 SIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLSWNGLGLEGASALGDALRNNNVLEE 335

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVLE 280
           L++S N I  EG   L   L+ N  +  L++    ++  G   I   L+ N  S++  L+
Sbjct: 336 LDVSNNRISTEGAILLAKGLLSNETLRILRIGKNPIQSAGGFGILTALRQNGGSVVETLD 395

Query: 281 LNNNMID 287
           L++ +++
Sbjct: 396 LSDVVVN 402


>gi|119603307|gb|EAW82901.1| nucleotide-binding oligomerization domains 27, isoform CRA_d [Homo
            sapiens]
          Length = 1837

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 13/297 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1468 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1527

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1528 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1587

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1588 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1646

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1647 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1702

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE
Sbjct: 1703 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDE 1754



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 140/341 (41%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1480 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1539

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1540 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1599

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL-----LEN---------------------S 302
            +L     LR ++L+ N I  +G   LAE+L     LE                       
Sbjct: 1600 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1659

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 1660 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 1715

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1716 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1774

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1775 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1815



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 154/373 (41%), Gaps = 27/373 (7%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D  +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1434 ARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1493

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L  + + +    AL++   S+   L 
Sbjct: 1494 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDL-SHLLLNSSTLALLTHRLSQMTCLQ 1552

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1553 SLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1612

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GN+I S G   +A  L     +  L L  N +G   A  L++ L  H  +  L L +  
Sbjct: 1613 SGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQH--LRVLHLPFSH 1670

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH---------------- 526
            +G  GA  +A  L  +  +  + L  N L   V   C  L                    
Sbjct: 1671 LGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQIDLVSCKIDNQTAKL 1730

Query: 527  --SAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
              S+  S   +    L  N L  + A  LAQ    +   L  +DL  N+I   GA+ +A+
Sbjct: 1731 LTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGR-LKRVDLEKNQITALGAWLLAE 1789

Query: 583  ALKANEDVAVTSL 595
             L     + V  L
Sbjct: 1790 GLAQGSSIQVIRL 1802



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 161/393 (40%), Gaps = 43/393 (10%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMI--DYSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + L+ L L+  N+   D +    L   LL 
Sbjct: 1404 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 1463

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----- 355
             S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L      
Sbjct: 1464 LSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML 1523

Query: 356  ----------------------SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                                  S+   L  L +  NSI   G  H++E ++   SL  ++
Sbjct: 1524 KRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELD 1583

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N IGD G + +A  L     +  IDL GN+I S G   +A  L     +  L L  N
Sbjct: 1584 LSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCN 1643

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             +G   A  L++ L  H  +  L L +  +G  GA  +A  L  +  +  + L  N L  
Sbjct: 1644 ALGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAG 1701

Query: 514  EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
             V   C  L         L+ +   S  I+  Q AK L  SF     AL  I L++N + 
Sbjct: 1702 GVLRFCMELPL-------LRQIDLVSCKIDN-QTAKLLTSSFTSC-PALEVILLSWNLLG 1752

Query: 574  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            D+ A  +AQ L   +   +  ++L  N +T  G
Sbjct: 1753 DEAAAELAQVLP--QMGRLKRVDLEKNQITALG 1783



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 10/255 (3%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 1472 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 1531

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 1532 LLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 1591

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            +G + +A +L     +  +DL  N +     S   G+    S +   + +    L  N L
Sbjct: 1592 AGVQHLATILPGLPELRKIDLSGNSI-----SSAGGVQLAESLVLC-RRLEELMLGCNAL 1645

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFL 602
                 L  + + + + L  + L F+ +   GA ++AQAL  +   E++++   NLA   L
Sbjct: 1646 GDPTALGLA-QELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVL 1704

Query: 603  TKFGQSALTDAKDLV 617
                +  L    DLV
Sbjct: 1705 RFCMELPLLRQIDLV 1719



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 27/233 (11%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R   ++ ++ G        + L G   +  L       GD    AL   L +  G+L +L
Sbjct: 661 REAPIHLDFDGCPLEPHCPEALVGCGQIENLSFKSRKCGDAFAEALSRSLPT-MGRLQML 719

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  + I+A+G  H+ + +  C  L  ++   N + D+    I + L     +  +DL  
Sbjct: 720 GLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSS 779

Query: 425 NNIHSKGASAIARV-------------------LKDNSVITSLDLAYNP--IGADGAKAL 463
           N+I       +ARV                   L      T+ +L   P    +DG +  
Sbjct: 780 NSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKG 839

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           ++         TL+L  CQ+    AE +  +L+    +  +DL  N L DE C
Sbjct: 840 AQSRSL-----TLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGC 887



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 17/242 (7%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  GD     L+ SL      + +  A + ITA GI      L     LK ++   N + 
Sbjct: 696 RKCGDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLS 755

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE--------LNN 283
           D+ V  + ++L     + +L LSS  +       +A +      +R+L+        L +
Sbjct: 756 DQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLS 815

Query: 284 NMIDYSGFTSLAEALLENSTIR--------SLHLNGNYGGALGANALAKGLEGNKSLREL 335
              + +     A  L E+   R        +L L         A AL   L+    L E+
Sbjct: 816 PPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQEGPHLEEV 875

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN + DEG R LM+  +S+      LD+ +N +S  G   V   +  C +L  +++ 
Sbjct: 876 DLSGNQLEDEGCR-LMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHIS 934

Query: 396 MN 397
           + 
Sbjct: 935 LQ 936



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 15/249 (6%)

Query: 210  FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            F G  Q  I  ++L LS  P+    +  LC  L D  G   LQLS   L D+  + + + 
Sbjct: 1100 FLGFRQRCIP-RSLCLSECPLEPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDC 1158

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG--ANALAKGLE 327
            L     L +L+L+   +       LA  L     ++ + L   +   L   +N   +G+ 
Sbjct: 1159 LPQLPQLSLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVC 1218

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
                     L  N +GD G+R L+  L        +LD+ +NSIS + A ++ E + +C 
Sbjct: 1219 CG-------LSANLLGDSGLRCLLECLPQVPIS-GLLDLSHNSISQESALYLLETLPSCP 1270

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
             +   ++   ++G E + +I  + ++++   T+ L   +   +  S +A  L  +  +T 
Sbjct: 1271 RVREASV---NLGSEQSFRIHFS-REDQAGKTLRLSECSFRPEHVSRLATGLSKSLQLTE 1326

Query: 448  LDLAYNPIG 456
            L L    +G
Sbjct: 1327 LTLTQCCLG 1335


>gi|403292566|ref|XP_003937312.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Saimiri boliviensis boliviensis]
          Length = 1040

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 121/243 (49%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GACKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E+  +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 831  GICKLIEHALHCEPLQKLALFNNKLTDGCAHSMAKLLACKQNFLALRLGNNHITATGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N L+DE VCS   GL        SLK +   + CI YL GA+ L Q
Sbjct: 951  LAKNVMLEELCLEENHLQDEGVCSLAEGL----KRNSSLKILKLSNNCITYL-GAEALLQ 1005

Query: 554  SFK 556
            + +
Sbjct: 1006 ALE 1008



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 4/267 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    V  L+L+   +      A+A +L++      L+L+ N +   G   L   L    
Sbjct: 759  VRGLNVGHLKLTFCSVGPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---G 815

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D G    M+ L + K    
Sbjct: 816  ACKALYLRDNNISDRGICKLIEHALHCEPLQKLALFNNKLTD-GCAHSMAKLLACKQNFL 874

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L
Sbjct: 875  ALRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWLSL 934

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    
Sbjct: 935  VGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSNNC 994

Query: 483  IGASGAEFVADMLRYNNTISILDLRAN 509
            I   GAE +   L  N+TI  + LR N
Sbjct: 995  ITYLGAEALLQALERNDTILEVWLRGN 1021



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 127/278 (45%), Gaps = 6/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G T     AF  VLQ       L L  N +GD GV+ L   L    
Sbjct: 761  GLNVGHLKLTFCSVGPTECAALAF--VLQHLRRPVALQLDYNSVGDIGVEQLLPCL---G 815

Query: 247  GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
              + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       +
Sbjct: 816  ACKALYLRDNNISDRGICKLIEHALHCEPLQKLALFNNKLTDGCAHSMAKLLACKQNFLA 875

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
            L L  N+  A GA  LA+GL GN SL+ L   GN +GDEG +AL   LS  +  L  L +
Sbjct: 876  LRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQS-LRWLSL 934

Query: 367  GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
              N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N 
Sbjct: 935  VGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSNNC 994

Query: 427  IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            I   GA A+ + L+ N  I  + L  N    +    LS
Sbjct: 995  ITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKLS 1032



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 87/169 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITA G +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACKQNFLALRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L  N
Sbjct: 923  LSDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 79/149 (53%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 873  FLALRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWL 932

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+DEG  ++AE LK NS L++L+L+N
Sbjct: 933  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSN 992

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL  N TI  + L GN
Sbjct: 993  NCITYLGAEALLQALERNDTILEVWLRGN 1021



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 92/209 (44%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            L A  ++ +   N  D G+  L E   + +  ++++   N +T     +   +L      
Sbjct: 814  LGACKALYLRDNNISDRGICKLIEHALHCEPLQKLALFNNKLTDGCAHSMAKLLACKQNF 873

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
              L L  N I   G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L 
Sbjct: 874  LALRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWLS 933

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L  N I   G  +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N
Sbjct: 934  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSNN 993

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             I   G  AL+  L      L V   GN 
Sbjct: 994  CITYLGAEALLQALERNDTILEVWLRGNT 1022


>gi|399497896|emb|CCG20276.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 139/341 (40%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDE-------GIRAL-MSG--LSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS G         GI A  ++G  L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKESGNSYGKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|224003663|ref|XP_002291503.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973279|gb|EED91610.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 988

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 29/279 (10%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             +++D  GR+ GD  +  L+E+L  N T + +S     ++  G       L  N  L  
Sbjct: 157 TMTAIDFDGRHIGDREVTKLSEALSTNSTVQILSLRNCKVSDVGCAKLADCLLRNEHLTA 216

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLS-SVDLRDEGAKAIAELLKNNSILRVLE- 280
           L+L GN IG EG   L   L+ N  ++ L LS + ++ D G   +   L++N+ +R LE 
Sbjct: 217 LHLDGNEIGTEGAAALSTALITNETLQVLTLSDNANVGDRGMVYLIGALEHNTTIRTLEV 276

Query: 281 -----------------LNNNMIDYSGFTSLAEALLENS-TIRSLHLNGNYGGALGANAL 322
                            L    ID S F SL E LL++   +  + L+G   G  G   L
Sbjct: 277 ETCGVHDTTRIDQIDELLQERQID-SNFESLLERLLDDDFRVTGIDLSGRQLGDKGVARL 335

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD--IGNNSISAKGAFHVA 380
           A+ L  N  +R+L L G  +G+ G  AL S L   +  ++++D  +GNN I  +G   ++
Sbjct: 336 AEALADNTQVRQLWLRGCKVGNGGALALASCL---EQNMSIVDLFLGNNDIGNEGVNAIS 392

Query: 381 EYIKNCKSLLWINLYMND--IGDEGAEKIADALKQNRTI 417
           + +    S L ++L M+D  +GD G +   +AL++N ++
Sbjct: 393 DALALSNSTL-VSLEMDDNKVGDSGVDSFTNALEKNTSV 430



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 21/287 (7%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           NA +  +      + D     ++E L  NS +++L L N  +   G   LA+ LL N  +
Sbjct: 155 NATMTAIDFDGRHIGDREVTKLSEALSTNSTVQILSLRNCKVSDVGCAKLADCLLRNEHL 214

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS-IGDEGIRALMSGLSSRKGKLAV 363
            +LHL+GN  G  GA AL+  L  N++L+ L L  N+ +GD G+  L+  L      +  
Sbjct: 215 TALHLDGNEIGTEGAAALSTALITNETLQVLTLSDNANVGDRGMVYLIGAL-EHNTTIRT 273

Query: 364 LDIGNNSISAKGAF-HVAEYIK------NCKSLLW-----------INLYMNDIGDEGAE 405
           L++    +        + E ++      N +SLL            I+L    +GD+G  
Sbjct: 274 LEVETCGVHDTTRIDQIDELLQERQIDSNFESLLERLLDDDFRVTGIDLSGRQLGDKGVA 333

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           ++A+AL  N  +  + L G  + + GA A+A  L+ N  I  L L  N IG +G  A+S+
Sbjct: 334 RLAEALADNTQVRQLWLRGCKVGNGGALALASCLEQNMSIVDLFLGNNDIGNEGVNAISD 393

Query: 466 VLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            L   +  + +L++   ++G SG +   + L  N ++ +     N L
Sbjct: 394 ALALSNSTLVSLEMDDNKVGDSGVDSFTNALEKNTSVLVASFENNAL 440



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 136/324 (41%), Gaps = 44/324 (13%)

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ +  ++ +   I     T L+EAL  NST++ L L       +G   LA  L  N+ L
Sbjct: 155 NATMTAIDFDGRHIGDREVTKLSEALSTNSTVQILSLRNCKVSDVGCAKLADCLLRNEHL 214

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS-ISAKGAFHVAEYIKNCKSLLW 391
             LHL GN IG EG  AL + L + +  L VL + +N+ +  +G  ++   +++  ++  
Sbjct: 215 TALHLDGNEIGTEGAAALSTALITNE-TLQVLTLSDNANVGDRGMVYLIGALEHNTTIRT 273

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + +    + D       D L Q R           I S   S + R+L D+  +T +DL+
Sbjct: 274 LEVETCGVHDTTRIDQIDELLQER----------QIDSNFESLLERLLDDDFRVTGIDLS 323

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              +G  G   L+E L  +  +  L L  C++G  GA  +A  L  N +I  L L  N +
Sbjct: 324 GRQLGDKGVARLAEALADNTQVRQLWLRGCKVGNGGALALASCLEQNMSIVDLFLGNNDI 383

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
            +E                                G   ++ +  + N  L S+++  N+
Sbjct: 384 GNE--------------------------------GVNAISDALALSNSTLVSLEMDDNK 411

Query: 572 IRDDGAFAIAQALKANEDVAVTSL 595
           + D G  +   AL+ N  V V S 
Sbjct: 412 VGDSGVDSFTNALEKNTSVLVASF 435



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 1/123 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+SGR  GD+G+  LAE+L  N    ++      +   G  A    L+ N+++  L L 
Sbjct: 320 IDLSGRQLGDKGVARLAEALADNTQVRQLWLRGCKVGNGGALALASCLEQNMSIVDLFLG 379

Query: 227 GNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N IG+EGV  + D L + N+ +  L++    + D G  +    L+ N+ + V    NN 
Sbjct: 380 NNDIGNEGVNAISDALALSNSTLVSLEMDDNKVGDSGVDSFTNALEKNTSVLVASFENNA 439

Query: 286 IDY 288
           +D+
Sbjct: 440 LDH 442



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 37/284 (13%)

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           +S    +  +D     I  +    ++E +    ++  ++L    + D G  K+AD L +N
Sbjct: 152 TSANATMTAIDFDGRHIGDREVTKLSEALSTNSTVQILSLRNCKVSDVGCAKLADCLLRN 211

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP-IGADGAKALSEVLKFHGNI 473
             +T + L GN I ++GA+A++  L  N  +  L L+ N  +G  G   L   L+ +  I
Sbjct: 212 EHLTALHLDGNEIGTEGAAALSTALITNETLQVLTLSDNANVGDRGMVYLIGALEHNTTI 271

Query: 474 NTLKLGWCQIGASGA-----EFVADMLRYNNTISIL------DLRANGLRDEVCSGCNGL 522
            TL++  C +  +       E + +    +N  S+L      D R  G+        +G 
Sbjct: 272 RTLEVETCGVHDTTRIDQIDELLQERQIDSNFESLLERLLDDDFRVTGI------DLSGR 325

Query: 523 SFFHSAIYSLKHMLFYSLCIN--YLQGAK-----------CLAQSFKVVNEALTSIDLAF 569
                 +  L   L  +  +   +L+G K           CL Q+  +V+     + L  
Sbjct: 326 QLGDKGVARLAEALADNTQVRQLWLRGCKVGNGGALALASCLEQNMSIVD-----LFLGN 380

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N+I ++G  AI+ AL A  +  + SL + +N +   G  + T+A
Sbjct: 381 NDIGNEGVNAISDAL-ALSNSTLVSLEMDDNKVGDSGVDSFTNA 423


>gi|28866921|gb|AAO59377.1|AF389420_1 NOD27 [Homo sapiens]
 gi|133872920|gb|ABO40479.1| NOD4 [Homo sapiens]
          Length = 1866

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 13/297 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1676 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE
Sbjct: 1732 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDE 1783



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 140/341 (41%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL-----LEN---------------------S 302
            +L     LR ++L+ N I  +G   LAE+L     LE                       
Sbjct: 1629 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 1744

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L +   +  +DL
Sbjct: 1745 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPKMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1844



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 154/373 (41%), Gaps = 27/373 (7%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D  +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1463 ARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1522

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L  + + +    AL++   S+   L 
Sbjct: 1523 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDL-SHLLLNSSTLALLTHRLSQMTCLQ 1581

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1582 SLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1641

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GN+I S G   +A  L     +  L L  N +G   A  L++ L  H  +  L L +  
Sbjct: 1642 SGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQH--LRVLHLPFSH 1699

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH---------------- 526
            +G  GA  +A  L  +  +  + L  N L   V   C  L                    
Sbjct: 1700 LGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQIDLVSCKIDNQTAKL 1759

Query: 527  --SAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
              S+  S   +    L  N L  + A  LAQ    +   L  +DL  N+I   GA+ +A+
Sbjct: 1760 LTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPKMGR-LKRVDLEKNQITALGAWLLAE 1818

Query: 583  ALKANEDVAVTSL 595
             L     + V  L
Sbjct: 1819 GLAQGSSIQVIRL 1831



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 152/372 (40%), Gaps = 41/372 (11%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMI--DYSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + L+ L L+  N+   D +    L   LL 
Sbjct: 1433 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 1492

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----- 355
             S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L      
Sbjct: 1493 LSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML 1552

Query: 356  ----------------------SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                                  S+   L  L +  NSI   G  H++E ++   SL  ++
Sbjct: 1553 KRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELD 1612

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N IGD G + +A  L     +  IDL GN+I S G   +A  L     +  L L  N
Sbjct: 1613 LSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCN 1672

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             +G   A  L++ L  H  +  L L +  +G  GA  +A  L  +  +  + L  N L  
Sbjct: 1673 ALGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAG 1730

Query: 514  EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
             V   C  L         L+ +   S  I+  Q AK L  SF     AL  I L++N + 
Sbjct: 1731 GVLRFCMELPL-------LRQIDLVSCKIDN-QTAKLLTSSFTSC-PALEVILLSWNLLG 1781

Query: 574  DDGAFAIAQALK 585
            D+ A  +AQ L 
Sbjct: 1782 DEAAAELAQVLP 1793



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 10/255 (3%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 1501 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 1560

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 1561 LLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 1620

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            +G + +A +L     +  +DL  N +     S   G+    S +   + +    L  N L
Sbjct: 1621 AGVQHLATILPGLPELRKIDLSGNSI-----SSAGGVQLAESLVLC-RRLEELMLGCNAL 1674

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFL 602
                 L  + + + + L  + L F+ +   GA ++AQAL  +   E++++   NLA   L
Sbjct: 1675 GDPTALGLA-QELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVL 1733

Query: 603  TKFGQSALTDAKDLV 617
                +  L    DLV
Sbjct: 1734 RFCMELPLLRQIDLV 1748



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 27/233 (11%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R   ++ ++ G        + L G   +  L       GD    AL   L +  G+L +L
Sbjct: 661 REAPIHLDFDGCPLEPHCPEALVGCGQIENLSFKSRKCGDAFAEALSRSLPT-MGRLQML 719

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  + I+A+G  H+ + +  C  L  ++   N + D+    I + L     +  +DL  
Sbjct: 720 GLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSS 779

Query: 425 NNIHSKGASAIARV-----------LKDNSVI--------TSLDLAYNP--IGADGAKAL 463
           N+I       +ARV            ++ ++I        T+ +L   P    +DG +  
Sbjct: 780 NSICVSTLLCLARVAVTCPTVRMLQARERTIIFLLSPPTETTAELQRAPDLQESDGQRKG 839

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           ++         TL+L  CQ+    AE +  +L+    +  +DL  N L DE C
Sbjct: 840 AQSRSL-----TLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGC 887



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 95/242 (39%), Gaps = 17/242 (7%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  GD     L+ SL      + +  A + ITA GI      L     LK ++   N + 
Sbjct: 696 RKCGDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLS 755

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI----- 286
           D+ V  + ++L     + +L LSS  +       +A +      +R+L+     I     
Sbjct: 756 DQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRMLQARERTIIFLLS 815

Query: 287 ---DYSGFTSLAEALLENSTIR--------SLHLNGNYGGALGANALAKGLEGNKSLREL 335
              + +     A  L E+   R        +L L         A AL   L+    L E+
Sbjct: 816 PPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQEGPHLEEV 875

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN + DEG R LM+  +S+      LD+ +N +S  G   V   +  C +L  +++ 
Sbjct: 876 DLSGNQLEDEGCR-LMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHIS 934

Query: 396 MN 397
           + 
Sbjct: 935 LQ 936



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 30/271 (11%)

Query: 210  FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            F G  Q  I  ++L LS  P+    +  LC  L D  G   LQLS   L D+  + + + 
Sbjct: 1100 FLGFRQRCIP-RSLCLSECPLEPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDC 1158

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEAL-----LENSTIRSLH---------------L 309
            L     L +L+L+   +       LA  L     ++   +RSLH                
Sbjct: 1159 LPQLPQLSLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVC 1218

Query: 310  NGNYGGA----LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
             G + G         +L   L   K L ++ L  N +GD G+R L+  L        +LD
Sbjct: 1219 CGRFTGCSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GLLD 1277

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + +NSIS + A ++ E + +C  +   ++   ++G E + +I  + ++++   T+ L   
Sbjct: 1278 LSHNSISQESALYLLETLPSCPRVREASV---NLGSEQSFRIHFS-REDQAGKTLRLSEC 1333

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            +   +  S +A  L  +  +T L L    +G
Sbjct: 1334 SFRPEHVSRLATGLSKSLQLTELTLTQCCLG 1364


>gi|399497992|emb|CCG20324.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399497860|emb|CCG20258.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+K L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   E+  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKL--LNVNGNFISEEGVDELKE 489



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKEEFKLLNVNGNFISEEGVDELKEIFKKSPEVL 498



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 139/342 (40%), Gaps = 61/342 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
               G N   A    ++ +E ++  K L ++NL  N +G++G       L+    +  + 
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELF 248

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    
Sbjct: 249 LMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSST 308

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSL 540
           ++G+ G   + + L   + +  LDLR N    EV    C  LS         KH     +
Sbjct: 309 RVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEI 359

Query: 541 CINYL----QGAKCLAQSFK----------------------------VVNEALTSIDLA 568
            ++YL    +GA  +A S K                               + L  + L 
Sbjct: 360 YLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLG 419

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 420 ENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|410983517|ref|XP_003998085.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 2 [Felis catus]
          Length = 992

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 136/267 (50%), Gaps = 4/267 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V  L+L+   +      A+A +L++      L+L++N +   G   L   L      ++L
Sbjct: 716 VGHLKLTFCGVGPAECAALAFVLRHLRRPVALQLDHNSVGDVGVEQLLPCL---DVCKAL 772

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 773 YLRDNNISDRGICKLVEHALHCEQLQKLALFNNKLTDGCAHSVARLLACRQNFLA-LRLG 831

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 832 NNHITASGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQSLKWLSLVGNNI 891

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            S GA A+A +L+ N  +  L L  N +  +G  +L++ L+ + ++  LKL    I   G
Sbjct: 892 GSVGAQALALMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSNNHITDLG 951

Query: 488 AEFVADMLRYNNTISILDLRANGLRDE 514
           AE +   L  N+TI  + LR N    E
Sbjct: 952 AEVLLQALERNDTILEVWLRGNTFSPE 978



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 104/207 (50%), Gaps = 1/207 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L L  N I D G+  L +  +    +++L L +  L D  A ++A LL        L 
Sbjct: 770 KALYLRDNNISDRGICKLVEHALHCEQLQKLALFNNKLTDGCAHSVARLLACRQNFLALR 829

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN I  SG   LAE L  N++++ L   GN  G  GA ALA+ L  ++SL+ L L GN
Sbjct: 830 LGNNHITASGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQSLKWLSLVGN 889

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +IG  G +AL   L  +   L  L +  N +  +G   +A+ ++   SL  + L  N I 
Sbjct: 890 NIGSVGAQALALML-EKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSNNHIT 948

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNI 427
           D GAE +  AL++N TI  + L GN  
Sbjct: 949 DLGAEVLLQALERNDTILEVWLRGNTF 975



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 120/265 (45%), Gaps = 4/265 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           G+  A   A   VL+       L L  N +GD GV+ L   L      + L L   ++ D
Sbjct: 725 GVGPAECAALAFVLRHLRRPVALQLDHNSVGDVGVEQLLPCL---DVCKALYLRDNNISD 781

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
            G   + E   +   L+ L L NN +      S+A  L       +L L  N+  A GA 
Sbjct: 782 RGICKLVEHALHCEQLQKLALFNNKLTDGCAHSVARLLACRQNFLALRLGNNHITASGAQ 841

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            LA+GL  N SL+ L   GN +GDEG +AL   L   +  L  L +  N+I + GA  +A
Sbjct: 842 VLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQ-SLKWLSLVGNNIGSVGAQALA 900

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             ++   +L  + L  N + DEG   +A  L++N ++  + L  N+I   GA  + + L+
Sbjct: 901 LMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSNNHITDLGAEVLLQALE 960

Query: 441 DNSVITSLDLAYNPIGADGAKALSE 465
            N  I  + L  N    +  + LS+
Sbjct: 961 RNDTILEVWLRGNTFSPEETERLSQ 985



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 87/164 (53%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A  L   Q    +    N ITA+G +     L++N +L+ L   GN +GDEG + L + 
Sbjct: 815 VARLLACRQNFLALRLGNNHITASGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEA 874

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L D+  ++ L L   ++   GA+A+A +L+ N  L  L L  N +   G  SLA+ L  N
Sbjct: 875 LGDHQSLKWLSLVGNNIGSVGAQALALMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRN 934

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           S+++ L L+ N+   LGA  L + LE N ++ E+ L GN+   E
Sbjct: 935 SSLKVLKLSNNHITDLGAEVLLQALERNDTILEVWLRGNTFSPE 978



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 77/149 (51%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +LK L
Sbjct: 825 FLALRLGNNHITASGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQSLKWL 884

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L GN IG  G + L  +L  N  +E L L    LRDEG  ++A+ L+ NS L+VL+L+N
Sbjct: 885 SLVGNNIGSVGAQALALMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSN 944

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           N I   G   L +AL  N TI  + L GN
Sbjct: 945 NHITDLGAEVLLQALERNDTILEVWLRGN 973



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 89/197 (45%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 778 NISDRGICKLVEHALHCEQLQKLALFNNKLTDGCAHSVARLLACRQNFLALRLGNNHITA 837

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L + L  NA ++ L      + DEGA+A+AE L ++  L+ L L  N I   G  
Sbjct: 838 SGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQSLKWLSLVGNNIGSVGAQ 897

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N T+  L L  N+    G  +LAKGL+ N SL+ L L  N I D G   L+ 
Sbjct: 898 ALALMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSNNHITDLGAEVLLQ 957

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GN 
Sbjct: 958 ALERNDTILEVWLRGNT 974



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 141 GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
           GF G K+  E  Q L E   + ++   + + G N G  G   LA  L  N T EE+    
Sbjct: 857 GFWGNKVGDEGAQALAEALGDHQSLKWLSLVGNNIGSVGAQALALMLEKNVTLEELCLEE 916

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           N +   G+ +    LQ N +LK L LS N I D G + L   L  N
Sbjct: 917 NHLRDEGVCSLAKGLQRNSSLKVLKLSNNHITDLGAEVLLQALERN 962


>gi|399498084|emb|CCG20370.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIARALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIARALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +A+ LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIARALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKESGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIARALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|169264970|dbj|BAG12313.1| nucleotide-binding oligomerization domain 1 [Sus scrofa]
          Length = 953

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   + +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARILDECKG-LKCLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN +S+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A+
Sbjct: 803 CLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQ 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQN 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I  + L  N ++ E
Sbjct: 923 NTGIMEICLNGNLIKPE 939



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 97/177 (54%), Gaps = 1/177 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  +  +  L + NN I+  GA +VA  +  CK L  + L
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYE-IVTFLGLYNNQITDVGARYVARILDECKGLKCLKL 791

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +R+I  + + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 792 GKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNG 851

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           I  +G K+L++ L+ + ++    L   ++    AE +A+ML+ N T+  L L  N +
Sbjct: 852 ISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GA+ +A +L     L+ L
Sbjct: 730 LTVIRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARILDECKGLKCL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I                               G   LA+ ++ ++S+ E+ + G
Sbjct: 790 KLGKNKITSE----------------------------GGKCLARAVKNSRSIFEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG +A    L +    L  L +  N IS +G   +A+ ++   SL    L  N++
Sbjct: 822 NQIGDEGAKAFAEALRNHPS-LTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I ++G + +A  L++N+ I  + L  N I  + 
Sbjct: 881 DDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVFED 946



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   + + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + + +  + LG N I S+G   +AR +K++  I  + +  N IG +GAKA +E
Sbjct: 775 YVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DEV          
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITARGTARLADALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 NNTGIMEICLN 932



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 29/218 (13%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K + E L    I+  L L NN I   G   +A  L E   ++ L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARILDECKGLKCLKLG 792

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N   + G   LA+ ++ ++S+ E+ + GN IGDEG +A                     
Sbjct: 793 KNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAF-------------------- 832

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                    AE ++N  SL  ++L  N I  EG + +A AL+QN ++    L  N +  +
Sbjct: 833 ---------AEALRNHPSLTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDE 883

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            A ++A +LK N  +  L L  N I A G   L++ L+
Sbjct: 884 VAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQ 921



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 93/202 (46%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     LK L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARILDECKGLKCLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 KNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA+AL +N+++R   L  N      A +LA+ L+ N++L+ L L  N I   G
Sbjct: 853 STEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
              L   L +  G + +   GN
Sbjct: 913 TARLADALQNNTGIMEICLNGN 934



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 86/170 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 770 DVGARYVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K++A+ L+ N+ LR+  L  N +D     SLA
Sbjct: 830 KAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA  L+ N  + E+ L+GN I  E
Sbjct: 890 EMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPE 939



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 77/153 (50%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +    + +       EG   LA ++  +++  EV    N I   G KAF   L+++ +
Sbjct: 782 ECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L+L+ N I  EG K L   L  NA +    L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITARGTARLADALQNNTGIMEICLNGN 934



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 35/171 (20%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K L E L  +  +  L L   QI   GA +VA +L       
Sbjct: 728 SRLTVIRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARIL------- 780

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
                     DE C G   L    + I S              +G KCLA++ K  + ++
Sbjct: 781 ----------DE-CKGLKCLKLGKNKITS--------------EGGKCLARAVKN-SRSI 814

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             + +  N+I D+GA A A+AL+ +   ++T+L+LA N ++  G  +L  A
Sbjct: 815 FEVGMWGNQIGDEGAKAFAEALRNHP--SLTNLSLAFNGISTEGGKSLAQA 863


>gi|399497958|emb|CCG20307.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L ++  +  + LS ++L DEGA A+A  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498


>gi|219884923|gb|ACL52836.1| unknown [Zea mays]
          Length = 541

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 34/290 (11%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA DG +     L+ LN+S N +G++GV+   ++L     +E L + +  + +E AKA++
Sbjct: 209 KALDGSV-----LRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALS 263

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           EL+     L+VL  +NNM    G   +AE +  +  + S   +    G+ G  AL++ L 
Sbjct: 264 ELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALG 323

Query: 328 GNKSLRELHLHGNSIG----------------------------DEGIRALMSGLSSRKG 359
               L++L L  NS G                            ++G  A+   L     
Sbjct: 324 TCTRLKKLDLRDNSFGVDAGLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSAL 383

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-IT 418
           +L VL+I  N I+AK A  +AE +   +SL  + L  N++ D GA  IA +L+   + + 
Sbjct: 384 QLEVLEIAGNEINAKAAPDLAECLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLK 443

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +D+  N +   GA    R + +      L++  N I  +G   + E+LK
Sbjct: 444 ELDVSTNMLQRVGARCFTRAVANKPDFVQLNINGNFISDEGVDEVKEILK 493



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 37/293 (12%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K L+G+  LR L++  N++G++G+RA    L S++  L  L + N+ IS + A  ++E
Sbjct: 207 FSKALDGS-VLRYLNISDNALGEKGVRAFSELLKSQES-LEELYVMNDGISEEAAKALSE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I   + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A++  L  
Sbjct: 265 LIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGT 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN-T 500
            + +  LDL  N  G D   ALSE L    ++  L L    +   G   +A  L+ +   
Sbjct: 325 CTRLKKLDLRDNSFGVDAGLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQ 384

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           + +L++  N +  +                                 A+CLA     V +
Sbjct: 385 LEVLEIAGNEINAKAAPDL----------------------------AECLA-----VMQ 411

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +L  + LA NE++D+GA  IA++L+      +  L+++ N L + G    T A
Sbjct: 412 SLKKLTLAENELKDNGAVIIAKSLEDGHS-DLKELDVSTNMLQRVGARCFTRA 463



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 29/275 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    G++G+   +E L   ++ EE+    +GI+    KA   ++ +   LK L+  
Sbjct: 219 LNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFH 278

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GDEG   + +++  +  VE  + S+  +  +G  A++E L   + L+ L+L +N  
Sbjct: 279 NNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNSF 338

Query: 287 DYSGFTSLAEAL---------------LENS--------------TIRSLHLNGNYGGAL 317
                 +L+E L               LEN                +  L + GN   A 
Sbjct: 339 GVDAGLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAK 398

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            A  LA+ L   +SL++L L  N + D G   +   L      L  LD+  N +   GA 
Sbjct: 399 AAPDLAECLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGAR 458

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                + N    + +N+  N I DEG +++ + LK
Sbjct: 459 CFTRAVANKPDFVQLNINGNFISDEGVDEVKEILK 493



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 30/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG  ++AE +  +   E    +A  I + G  A    L +   LK L+L  N  G + 
Sbjct: 283 GDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNSFGVDA 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L + L     +  L LS ++L ++G  AIA+ LK +++ L VLE+  N I+      
Sbjct: 343 GLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPD 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLREL----------------- 335
           LAE L    +++ L L  N     GA  +AK LE G+  L+EL                 
Sbjct: 403 LAECLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGARCFTR 462

Query: 336 -----------HLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                      +++GN I DEG+  +   L + K  L VL
Sbjct: 463 AVANKPDFVQLNINGNFISDEGVDEVKEILKAGKKSLDVL 502


>gi|326430053|gb|EGD75623.1| hypothetical protein PTSG_12468 [Salpingoeca sp. ATCC 50818]
          Length = 344

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 101/178 (56%), Gaps = 2/178 (1%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           E   LS  +L + GA+ IAE LK N+ +  L L  N +  +G  ++AEAL  N+T+  L 
Sbjct: 114 EECILSWHNLEEIGARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELS 173

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N+ G  G  A+A  LE N  L  L L+ N+IG +G++A+   L  +   L  L +  
Sbjct: 174 LSDNHLGPDGCAAIATALESNTMLHTLFLYNNNIGTDGVKAIAKSLL-KNTSLTRLSLSR 232

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           N +   GA  +AE +K+  +LL ++L  N+IG+ GA  +A A+   R+I TI  GG+N
Sbjct: 233 NHLGPDGAIAIAEALKSNTTLLNLDLGWNEIGETGAAALARAIDPRRSI-TITYGGDN 289



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 1/158 (0%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G R +   L      L  L++G N++ A G   +AE +K   +L  ++L  N +G +G  
Sbjct: 127 GARVIAEALKKNTNMLK-LNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDNHLGPDGCA 185

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA AL+ N  + T+ L  NNI + G  AIA+ L  N+ +T L L+ N +G DGA A++E
Sbjct: 186 AIATALESNTMLHTLFLYNNNIGTDGVKAIAKSLLKNTSLTRLSLSRNHLGPDGAIAIAE 245

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            LK +  +  L LGW +IG +GA  +A  +    +I+I
Sbjct: 246 ALKSNTTLLNLDLGWNEIGETGAAALARAIDPRRSITI 283



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           EE   + + +   G +     L+ N  +  LNL  N +   G + + + L  N  +  L 
Sbjct: 114 EECILSWHNLEEIGARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELS 173

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LS   L  +G  AIA  L++N++L  L L NN I   G  ++A++LL+N+++  L L+ N
Sbjct: 174 LSDNHLGPDGCAAIATALESNTMLHTLFLYNNNIGTDGVKAIAKSLLKNTSLTRLSLSRN 233

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           + G  GA A+A+ L+ N +L  L L  N IG+ G  AL   +  R+
Sbjct: 234 HLGPDGAIAIAEALKSNTTLLNLDLGWNEIGETGAAALARAIDPRR 279



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 33/200 (16%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  +++ + GA  IA+ALK+N  +  ++LG NN+ + G  AIA  LK N+ +  L L+ N
Sbjct: 118 LSWHNLEEIGARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDN 177

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +G DG  A++  L+ +  ++TL L    IG  G + +A  L  N +++ L L  N L  
Sbjct: 178 HLGPDGCAAIATALESNTMLHTLFLYNNNIGTDGVKAIAKSLLKNTSLTRLSLSRNHLGP 237

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           +                                GA  +A++ K  N  L ++DL +NEI 
Sbjct: 238 D--------------------------------GAIAIAEALK-SNTTLLNLDLGWNEIG 264

Query: 574 DDGAFAIAQALKANEDVAVT 593
           + GA A+A+A+     + +T
Sbjct: 265 ETGAAALARAIDPRRSITIT 284



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 77/132 (58%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   ++L +NL  N++   G   IA+ALK+N T+  + L  N++   G +A
Sbjct: 127 GARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDNHLGPDGCAA 186

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  L+ N+++ +L L  N IG DG KA+++ L  + ++  L L    +G  GA  +A+ 
Sbjct: 187 IATALESNTMLHTLFLYNNNIGTDGVKAIAKSLLKNTSLTRLSLSRNHLGPDGAIAIAEA 246

Query: 495 LRYNNTISILDL 506
           L+ N T+  LDL
Sbjct: 247 LKSNTTLLNLDL 258



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 2/165 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S  N  + G   +AE+L  N    +++   N + AAG +A    L+ N  L  L+LS N
Sbjct: 118 LSWHNLEEIGARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDN 177

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMID 287
            +G +G   +   L  N  +  L L + ++  +G KAIA+ LLKN S+ R L L+ N + 
Sbjct: 178 HLGPDGCAAIATALESNTMLHTLFLYNNNIGTDGVKAIAKSLLKNTSLTR-LSLSRNHLG 236

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
             G  ++AEAL  N+T+ +L L  N  G  GA ALA+ ++  +S+
Sbjct: 237 PDGAIAIAEALKSNTTLLNLDLGWNEIGETGAAALARAIDPRRSI 281



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 24/198 (12%)

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGAD-----------GAKALSEVLKFHGNINTLKLGW 480
           A+AIA  L D +     D+A +  G +           GA+ ++E LK + N+  L LGW
Sbjct: 89  AAAIAAHLDDYTQQRIHDMANSTCGEECILSWHNLEEIGARVIAEALKKNTNMLKLNLGW 148

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYS--LKHMLF- 537
             + A+G   +A+ L+ NNT+  L L  N L      G +G +   +A+ S  + H LF 
Sbjct: 149 NNLRAAGGRAIAEALKRNNTLHELSLSDNHL------GPDGCAAIATALESNTMLHTLFL 202

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           Y+  I    G K +A+S  + N +LT + L+ N +  DGA AIA+ALK+N    + +L+L
Sbjct: 203 YNNNIG-TDGVKAIAKSL-LKNTSLTRLSLSRNHLGPDGAIAIAEALKSN--TTLLNLDL 258

Query: 598 ANNFLTKFGQSALTDAKD 615
             N + + G +AL  A D
Sbjct: 259 GWNEIGETGAAALARAID 276


>gi|402908353|ref|XP_003916914.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Papio anubis]
          Length = 1044

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 768  VGHLKLTFCSVGPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 824

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 825  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 883

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 884  NNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 943

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G   L+E LK + ++  LKL    I   G
Sbjct: 944  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLG 1003

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1004 AEALLQALEKNDTILEVWLRGN 1025



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 118/243 (48%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 779  GPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 834

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 835  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARV 894

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 895  LAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 954

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N L+DE VC    GL        SLK +   + CI YL GA+ L Q
Sbjct: 955  LAKNVMLEELCLEENHLQDEGVCCLAEGL----KRNSSLKILKLSNNCITYL-GAEALLQ 1009

Query: 554  SFK 556
            + +
Sbjct: 1010 ALE 1012



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 8/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G       AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 765  GLNVGHLKLTFCSVGPAECAALAF--VLRHLRQPVALQLDYNSVGDIGVEQLLPCL---- 818

Query: 247  GVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            GV + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       
Sbjct: 819  GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 878

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +L L  N+  A GA  LA+GL GN SL+ L   GN +GDEG +AL   L   +  L  L 
Sbjct: 879  ALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQS-LRWLS 937

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N
Sbjct: 938  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNN 997

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I   GA A+ + L+ N  I  + L  N    + A  L
Sbjct: 998  CITYLGAEALLQALEKNDTILEVWLRGNIFSLEEADKL 1035



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 83/159 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 867  MAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEA 926

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G   LAE L  N
Sbjct: 927  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRN 986

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN
Sbjct: 987  SSLKILKLSNNCITYLGAEALLQALEKNDTILEVWLRGN 1025



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 79/149 (53%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 877  FLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWL 936

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+DEG   +AE LK NS L++L+L+N
Sbjct: 937  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSN 996

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL +N TI  + L GN
Sbjct: 997  NCITYLGAEALLQALEKNDTILEVWLRGN 1025



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 87/196 (44%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 830  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 889

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  NA ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 890  AGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 949

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G   LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 950  ALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLGAEALLQ 1009

Query: 353  GLSSRKGKLAVLDIGN 368
             L      L V   GN
Sbjct: 1010 ALEKNDTILEVWLRGN 1025


>gi|350529351|ref|NP_115582.4| protein NLRC5 [Homo sapiens]
 gi|269849666|sp|Q86WI3.3|NLRC5_HUMAN RecName: Full=Protein NLRC5; AltName: Full=Caterpiller protein 16.1;
            Short=CLR16.1; AltName: Full=Nucleotide-binding
            oligomerization domain protein 27; AltName:
            Full=Nucleotide-binding oligomerization domain protein 4
          Length = 1866

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 13/297 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1676 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE
Sbjct: 1732 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDE 1783



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 140/341 (41%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL-----LEN---------------------S 302
            +L     LR ++L+ N I  +G   LAE+L     LE                       
Sbjct: 1629 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 1744

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1745 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1844



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 154/373 (41%), Gaps = 27/373 (7%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D  +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1463 ARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1522

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L  + + +    AL++   S+   L 
Sbjct: 1523 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDL-SHLLLNSSTLALLTHRLSQMTCLQ 1581

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1582 SLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1641

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GN+I S G   +A  L     +  L L  N +G   A  L++ L  H  +  L L +  
Sbjct: 1642 SGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQH--LRVLHLPFSH 1699

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH---------------- 526
            +G  GA  +A  L  +  +  + L  N L   V   C  L                    
Sbjct: 1700 LGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQIDLVSCKIDNQTAKL 1759

Query: 527  --SAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
              S+  S   +    L  N L  + A  LAQ    +   L  +DL  N+I   GA+ +A+
Sbjct: 1760 LTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGR-LKRVDLEKNQITALGAWLLAE 1818

Query: 583  ALKANEDVAVTSL 595
             L     + V  L
Sbjct: 1819 GLAQGSSIQVIRL 1831



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 161/393 (40%), Gaps = 43/393 (10%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMI--DYSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + L+ L L+  N+   D +    L   LL 
Sbjct: 1433 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 1492

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----- 355
             S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L      
Sbjct: 1493 LSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML 1552

Query: 356  ----------------------SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                                  S+   L  L +  NSI   G  H++E ++   SL  ++
Sbjct: 1553 KRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELD 1612

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N IGD G + +A  L     +  IDL GN+I S G   +A  L     +  L L  N
Sbjct: 1613 LSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCN 1672

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             +G   A  L++ L  H  +  L L +  +G  GA  +A  L  +  +  + L  N L  
Sbjct: 1673 ALGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAG 1730

Query: 514  EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
             V   C  L         L+ +   S  I+  Q AK L  SF     AL  I L++N + 
Sbjct: 1731 GVLRFCMELPL-------LRQIDLVSCKIDN-QTAKLLTSSFTSC-PALEVILLSWNLLG 1781

Query: 574  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            D+ A  +AQ L   +   +  ++L  N +T  G
Sbjct: 1782 DEAAAELAQVLP--QMGRLKRVDLEKNQITALG 1812



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 10/255 (3%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 1501 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 1560

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 1561 LLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 1620

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            +G + +A +L     +  +DL  N +     S   G+    S +   + +    L  N L
Sbjct: 1621 AGVQHLATILPGLPELRKIDLSGNSI-----SSAGGVQLAESLVLC-RRLEELMLGCNAL 1674

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFL 602
                 L  + + + + L  + L F+ +   GA ++AQAL  +   E++++   NLA   L
Sbjct: 1675 GDPTALGLA-QELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVL 1733

Query: 603  TKFGQSALTDAKDLV 617
                +  L    DLV
Sbjct: 1734 RFCMELPLLRQIDLV 1748



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 27/233 (11%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R   ++ ++ G        + L G   +  L       GD    AL   L +  G+L +L
Sbjct: 661 REAPIHLDFDGCPLEPHCPEALVGCGQIENLSFKSRKCGDAFAEALSRSLPT-MGRLQML 719

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  + I+A+G  H+ + +  C  L  ++   N + D+    I + L     +  +DL  
Sbjct: 720 GLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSS 779

Query: 425 NNIHSKGASAIARV-------------------LKDNSVITSLDLAYNP--IGADGAKAL 463
           N+I       +ARV                   L      T+ +L   P    +DG +  
Sbjct: 780 NSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKG 839

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           ++         TL+L  CQ+    AE +  +L+    +  +DL  N L DE C
Sbjct: 840 AQSRSL-----TLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGC 887



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 96/242 (39%), Gaps = 17/242 (7%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  GD     L+ SL      + +  A + ITA GI      L     LK ++   N + 
Sbjct: 696 RKCGDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLS 755

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE--------LNN 283
           D+ V  + ++L     + +L LSS  +       +A +      +R+L+        L +
Sbjct: 756 DQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLS 815

Query: 284 NMIDYSGFTSLAEALLENSTIR--------SLHLNGNYGGALGANALAKGLEGNKSLREL 335
              + +     A  L E+   R        +L L         A AL   L+    L E+
Sbjct: 816 PPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQEGPHLEEV 875

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN + DEG R LM+  +S+      LD+ NN +S  G   V   +  C +L  +++ 
Sbjct: 876 DLSGNQLEDEGCR-LMAEAASQLHIARKLDLSNNGLSVAGVHCVLRAVSACWTLAELHIS 934

Query: 396 MN 397
           + 
Sbjct: 935 LQ 936



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 30/271 (11%)

Query: 210  FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            F G  Q  I  ++L LS  P+    +  LC  L D  G   LQLS   L D+  + + + 
Sbjct: 1100 FLGFRQRCIP-RSLCLSECPLEPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDC 1158

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEAL-----LENSTIRSLH---------------L 309
            L     L +L+L+   +       LA  L     ++   +RSLH                
Sbjct: 1159 LPQLPQLSLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVC 1218

Query: 310  NGNYGGA----LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
             G + G         +L   L   K L ++ L  N +GD G+R L+  L        +LD
Sbjct: 1219 CGRFTGCSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GLLD 1277

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + +NSIS + A ++ E + +C  +   ++   ++G E + +I  + ++++   T+ L   
Sbjct: 1278 LSHNSISQESALYLLETLPSCPRVREASV---NLGSEQSFRIHFS-REDQAGKTLRLSEC 1333

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            +   +  S +A  L  +  +T L L    +G
Sbjct: 1334 SFRPEHVSRLATGLSKSLQLTELTLTQCCLG 1364


>gi|162318134|gb|AAI56513.1| NLR family, CARD domain containing 5 [synthetic construct]
 gi|225000244|gb|AAI72510.1| NLR family, CARD domain containing 5 [synthetic construct]
          Length = 1866

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 13/297 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1676 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE
Sbjct: 1732 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDE 1783



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 140/341 (41%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL-----LEN---------------------S 302
            +L     LR ++L+ N I  +G   LAE+L     LE                       
Sbjct: 1629 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 1744

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1745 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1844



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 154/373 (41%), Gaps = 27/373 (7%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D  +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1463 ARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1522

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L  + + +    AL++   S+   L 
Sbjct: 1523 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDL-SHLLLNSSTLALLTHRLSQMTCLQ 1581

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1582 SLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1641

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GN+I S G   +A  L     +  L L  N +G   A  L++ L  H  +  L L +  
Sbjct: 1642 SGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQH--LRVLHLPFSH 1699

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH---------------- 526
            +G  GA  +A  L  +  +  + L  N L   V   C  L                    
Sbjct: 1700 LGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQIDLVSCKIDNQTAKL 1759

Query: 527  --SAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
              S+  S   +    L  N L  + A  LAQ    +   L  +DL  N+I   GA+ +A+
Sbjct: 1760 LTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGR-LKRVDLEKNQITALGAWLLAE 1818

Query: 583  ALKANEDVAVTSL 595
             L     + V  L
Sbjct: 1819 GLAQGSSIQVIRL 1831



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 161/393 (40%), Gaps = 43/393 (10%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMI--DYSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + L+ L L+  N+   D +    L   LL 
Sbjct: 1433 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 1492

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----- 355
             S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L      
Sbjct: 1493 LSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML 1552

Query: 356  ----------------------SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                                  S+   L  L +  NSI   G  H++E ++   SL  ++
Sbjct: 1553 KRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELD 1612

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N IGD G + +A  L     +  IDL GN+I S G   +A  L     +  L L  N
Sbjct: 1613 LSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCN 1672

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             +G   A  L++ L  H  +  L L +  +G  GA  +A  L  +  +  + L  N L  
Sbjct: 1673 ALGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAG 1730

Query: 514  EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
             V   C  L         L+ +   S  I+  Q AK L  SF     AL  I L++N + 
Sbjct: 1731 GVLRFCMELPL-------LRQIDLVSCKIDN-QTAKLLTSSFTSC-PALEVILLSWNLLG 1781

Query: 574  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            D+ A  +AQ L   +   +  ++L  N +T  G
Sbjct: 1782 DEAAAELAQVLP--QMGRLKRVDLEKNQITALG 1812



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 10/255 (3%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 1501 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 1560

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 1561 LLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 1620

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            +G + +A +L     +  +DL  N +     S   G+    S +   + +    L  N L
Sbjct: 1621 AGVQHLATILPGLPELRKIDLSGNSI-----SSAGGVQLAESLVLC-RRLEELMLGCNAL 1674

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFL 602
                 L  + + + + L  + L F+ +   GA ++AQAL  +   E++++   NLA   L
Sbjct: 1675 GDPTALGLA-QELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVL 1733

Query: 603  TKFGQSALTDAKDLV 617
                +  L    DLV
Sbjct: 1734 RFCMELPLLRQIDLV 1748



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 27/233 (11%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R   ++ ++ G        + L G   +  L       GD    AL   L +  G+L +L
Sbjct: 661 REAPIHLDFDGCPLEPHCPEALVGCGQIENLSFKSRKCGDAFAEALSRSLPT-MGRLQML 719

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  + I+A+G  H+ + +  C  L  ++   N + D+    I + L     +  +DL  
Sbjct: 720 GLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSS 779

Query: 425 NNIHSKGASAIARV-------------------LKDNSVITSLDLAYNP--IGADGAKAL 463
           N+I       +ARV                   L      T+ +L   P    +DG +  
Sbjct: 780 NSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKG 839

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           ++         TL+L  CQ+    AE +  +L+    +  +DL  N L DE C
Sbjct: 840 AQSRSL-----TLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGC 887



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 17/242 (7%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  GD     L+ SL      + +  A + ITA GI      L     LK ++   N + 
Sbjct: 696 RKCGDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLS 755

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE--------LNN 283
           D+ V  + ++L     + +L LSS  +       +A +      +R+L+        L +
Sbjct: 756 DQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLS 815

Query: 284 NMIDYSGFTSLAEALLENSTIR--------SLHLNGNYGGALGANALAKGLEGNKSLREL 335
              + +     A  L E+   R        +L L         A AL   L+    L E+
Sbjct: 816 PPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQEGPHLEEV 875

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN + DEG R LM+  +S+      LD+ +N +S  G   V   +  C +L  +++ 
Sbjct: 876 DLSGNQLEDEGCR-LMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHIS 934

Query: 396 MN 397
           + 
Sbjct: 935 LQ 936



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 30/271 (11%)

Query: 210  FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            F G  Q  I  ++L LS  P+    +  LC  L D  G   LQLS   L D+  + + + 
Sbjct: 1100 FLGFRQRCIP-RSLCLSECPLEPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDC 1158

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEAL-----LENSTIRSLH---------------L 309
            L     L +L+L+   +       LA  L     ++   +RSLH                
Sbjct: 1159 LPQLPQLSLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVC 1218

Query: 310  NGNYGGA----LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
             G + G         +L   L   K L ++ L  N +GD G+R L+  L        +LD
Sbjct: 1219 CGRFTGCSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GLLD 1277

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + +NSIS + A ++ E + +C  +   ++   ++G E + +I  + ++++   T+ L   
Sbjct: 1278 LSHNSISQESALYLLETLPSCPRVREASV---NLGSEQSFRIHFS-REDQAGKTLRLSEC 1333

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            +   +  S +A  L  +  +T L L    +G
Sbjct: 1334 SFRPEHVSRLATGLSKSLQLTELTLTQCCLG 1364


>gi|399497932|emb|CCG20294.1| Ran GTPase activating protein 2 [Solanum stenophyllidium]
          Length = 553

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFRKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A 
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAD 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 143/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           +  ++ LEG  +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 HVFSEALEGC-NLKFLNLSDNALGEKGVRAFRKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  +  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITADAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL--LNVNGNLISEEGVDELKE 489



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITADAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNLISEEGVDELKEIFKKSPEML 498


>gi|344169683|emb|CCA82044.1| putative leucine-rich-repeat type III effector protein (GALA1-like)
           [blood disease bacterium R229]
          Length = 590

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 49/329 (14%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           A++L  N T   ++   + +  AG +A    L +   L +LN+S N IG EG K L +  
Sbjct: 280 AQALARNTTLTSLNVRLSRLGDAGARA----LAATTTLTSLNVSLNEIGPEGAKALAN-- 333

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
             N  +  L +    +  +GA+A+A  +     L  L ++ N I+ +G    A+AL  N+
Sbjct: 334 --NTSLTSLDIGGNKVGVDGAQALATSMT----LTSLVIHRNRIEVAG----AQALANNT 383

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            + SL ++ N  G  GA A       N++L  L +  N IGDEG + L     +R   L 
Sbjct: 384 RLTSLDISDNGLGVWGARAFVD----NETLTSLRIATNMIGDEGAKWL-----ARNTTLT 434

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            LDIG N I   GA  +A   K    L  +N+  N IG  G  ++A    +N T+  +++
Sbjct: 435 SLDIGENRIGETGAQALAGNTK----LTSLNISGNAIGMMGVLRLA----RNTTLAALNV 486

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW-- 480
             N I   GA  +AR    N+ + SL + YN IG +GA+AL+      GN   + L    
Sbjct: 487 SRNQIGVAGAQDLAR----NTTLRSLVVNYNEIGNEGARALA------GNKTLVSLSVVD 536

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRAN 509
           C+IG  GA  +A     N T+++LD+  N
Sbjct: 537 CRIGDEGAHALA----ANTTLALLDVSLN 561



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 190/394 (48%), Gaps = 71/394 (18%)

Query: 219 ALKTLNLSG--NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           +LK L+LS     I  EG+  L  +      + RL +S   +  EGA+ +A +      L
Sbjct: 143 SLKALDLSDCRAQITSEGIAHLSKL-----PLVRLNVSHNRIDAEGARLLAAM----PTL 193

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L++++N I   G    A+AL +++T+  L++  N  G  GA ALA     N  L  L+
Sbjct: 194 TELDISHNDIRADG----AQALADSATLTLLNVGNNRIGDRGAQALA----ANTKLTSLN 245

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
              N IG  G++AL +  +     L+   I   S         A+ +    +L  +N+ +
Sbjct: 246 ASANGIGSAGVQALAANATLAALDLSCTPIDEES---------AQALARNTTLTSLNVRL 296

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           + +GD GA     AL    T+T++++  N I  +GA A+A    +N+ +TSLD+  N +G
Sbjct: 297 SRLGDAGAR----ALAATTTLTSLNVSLNEIGPEGAKALA----NNTSLTSLDIGGNKVG 348

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            DGA+AL+  +     + +L +   +I  +GA+ +A+    N  ++ LD+  NGL     
Sbjct: 349 VDGAQALATSM----TLTSLVIHRNRIEVAGAQALAN----NTRLTSLDISDNGL----- 395

Query: 517 SGCNGLSFF--HSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEI 572
            G  G   F  +  + SL+      +  N +  +GAK LA+     N  LTS+D+  N I
Sbjct: 396 -GVWGARAFVDNETLTSLR------IATNMIGDEGAKWLAR-----NTTLTSLDIGENRI 443

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            + GA A+A   K      +TSLN++ N +   G
Sbjct: 444 GETGAQALAGNTK------LTSLNISGNAIGMMG 471



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 214/455 (47%), Gaps = 88/455 (19%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + +SG +  D+ L  L  SL     A ++S     IT+ GI        S + L  
Sbjct: 122 ALEKLTLSG-DVTDDDLKGLPASL----KALDLSDCRAQITSEGIAHL-----SKLPLVR 171

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+S N I  EG + L  +      +  L +S  D+R +GA+A+A+    ++ L +L + 
Sbjct: 172 LNVSHNRIDAEGARLLAAMPT----LTELDISHNDIRADGAQALAD----SATLTLLNVG 223

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL-------------------- 322
           NN I   G    A+AL  N+ + SL+ + N  G+ G  AL                    
Sbjct: 224 NNRIGDRG----AQALAANTKLTSLNASANGIGSAGVQALAANATLAALDLSCTPIDEES 279

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L  N +L  L++  + +GD G RAL +  +     L  L++  N I  +GA    + 
Sbjct: 280 AQALARNTTLTSLNVRLSRLGDAGARALAATTT-----LTSLNVSLNEIGPEGA----KA 330

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           + N  SL  +++  N +G +GA+ +A ++    T+T++ +  N I   GA A+A    +N
Sbjct: 331 LANNTSLTSLDIGGNKVGVDGAQALATSM----TLTSLVIHRNRIEVAGAQALA----NN 382

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLD++ N +G  GA+A  +    +  + +L++    IG  GA+++A     N T++
Sbjct: 383 TRLTSLDISDNGLGVWGARAFVD----NETLTSLRIATNMIGDEGAKWLA----RNTTLT 434

Query: 503 ILDLRANGLRD---EVCSGCNGLSFFHSAIYSLKHMLFYSLCINY-------------LQ 546
            LD+  N + +   +  +G   L+  + +  ++  M    L  N              + 
Sbjct: 435 SLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLRLARNTTLAALNVSRNQIGVA 494

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
           GA+ LA+     N  L S+ + +NEI ++GA A+A
Sbjct: 495 GAQDLAR-----NTTLRSLVVNYNEIGNEGARALA 524


>gi|118366745|ref|XP_001016588.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89298355|gb|EAR96343.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 897

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 169/377 (44%), Gaps = 49/377 (12%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           ++E  KE   F  + +     G++G +FL+E                            +
Sbjct: 302 ISEILKESDHFCRLYLDKNQVGNQGAYFLSE----------------------------M 333

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD------LRDEGAKAIA 267
           LQ N +L  L++SGN IG EG + L   L+ N  +  L ++S D      +   GA  + 
Sbjct: 334 LQVNSSLIHLDVSGNNIGPEGFEVLFRSLIYNCTLISLDVASKDGLNRNRIGQIGADQLE 393

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           +LL+ NS ++ L L    I+      + + L +  ++  + ++ N   +  A  +   ++
Sbjct: 394 KLLRFNSSIQFLNLCGTSINNDQLKLIMKGLNDGKSLTMIDISQNDLDSNAAEIIVSNIQ 453

Query: 328 GNKSLRELHLHGNSIGDEGIRALMS-GLSSRKGKLAVLDIGNNSISAKGA---FHVAEYI 383
            N ++ EL++  N IGD G+      GL S+   L  LD+  N I+ +G    F      
Sbjct: 454 -NSNITELYMSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNKITTRGLAGFFQSMHKN 512

Query: 384 KNCKSLLWINLYMNDIGDEGAE--KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +N   L+     +ND   +G +  KIA+ L +N  I  +      I  +G S+IA  L+ 
Sbjct: 513 QNLHKLI-----LNDNNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSIAYGLEK 567

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  +T L+L  N +   GAK+L+E L    ++  L L  C+I   G   +A  L  ++  
Sbjct: 568 NKNLTYLNLKENKVRNQGAKSLAEALSHKSHLQVLDLSLCKIEDEGGMALAAALTKSSLY 627

Query: 502 SILDLRANGLRDEVCSG 518
           S L+LR N L D  C G
Sbjct: 628 S-LNLRENSLHD--CVG 641



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 37/339 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKAFDGVLQSNIAL 220
           +D+SG N G EG   L  SL YN T   +  A+      N I   G    + +L+ N ++
Sbjct: 343 LDVSGNNIGPEGFEVLFRSLIYNCTLISLDVASKDGLNRNRIGQIGADQLEKLLRFNSSI 402

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI----- 275
           + LNL G  I ++ +K +   L D   +  + +S  DL    A+ I   ++N++I     
Sbjct: 403 QFLNLCGTSINNDQLKLIMKGLNDGKSLTMIDISQNDLDSNAAEIIVSNIQNSNITELYM 462

Query: 276 ------------------------LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
                                   L  L+L+ N I   G     +++ +N  +  L LN 
Sbjct: 463 SSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNKITTRGLAGFFQSMHKNQNLHKLILND 522

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N    +  N +A+ L  N  ++ L      I  EG+ ++  GL   K  L  L++  N +
Sbjct: 523 NNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSIAYGLEKNKN-LTYLNLKENKV 581

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
             +GA  +AE + +   L  ++L +  I DEG   +A AL ++ ++ +++L  N++H   
Sbjct: 582 RNQGAKSLAEALSHKSHLQVLDLSLCKIEDEGGMALAAALTKS-SLYSLNLRENSLHDCV 640

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
            + I   L+ N+ I  +++  NPI     + + + L+++
Sbjct: 641 GALICSSLEKNTYIRKINVERNPINYSYQEKIKKSLQYN 679



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 44/333 (13%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           + L L    +G +    + +IL ++    RL L    + ++GA  ++E+L+ NS L  L+
Sbjct: 285 RQLKLQDLSLGSKSAYLISEILKESDHFCRLYLDKNQVGNQGAYFLSEMLQVNSSLIHLD 344

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLH------LNGNYGGALGANALAKGLEGNKSLRE 334
           ++ N I   GF  L  +L+ N T+ SL       LN N  G +GA+ L K L  N S++ 
Sbjct: 345 VSGNNIGPEGFEVLFRSLIYNCTLISLDVASKDGLNRNRIGQIGADQLEKLLRFNSSIQF 404

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L G SI ++ ++ +M GL+  K  L ++DI  N + +  A  +   I+N        L
Sbjct: 405 LNLCGTSINNDQLKLIMKGLNDGKS-LTMIDISQNDLDSNAAEIIVSNIQNSN---ITEL 460

Query: 395 YM--NDIGDEGAEKIADA-------------LKQNRTITTIDLGG--------------- 424
           YM  N IGD G     D              L QN+ ITT  L G               
Sbjct: 461 YMSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNK-ITTRGLAGFFQSMHKNQNLHKLI 519

Query: 425 ---NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
              NN      + IA  L +N+ I  L      I  +G  +++  L+ + N+  L L   
Sbjct: 520 LNDNNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSIAYGLEKNKNLTYLNLKEN 579

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           ++   GA+ +A+ L + + + +LDL    + DE
Sbjct: 580 KVRNQGAKSLAEALSHKSHLQVLDLSLCKIEDE 612



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 23/316 (7%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           ++E L E+     L+L+ N  G  GA  L++ L+ N SL  L + GN+IG EG   L   
Sbjct: 302 ISEILKESDHFCRLYLDKNQVGNQGAYFLSEMLQVNSSLIHLDVSGNNIGPEGFEVLFRS 361

Query: 354 LSSRKGKLAVLDIGN------NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           L      L  LD+ +      N I   GA  + + ++   S+ ++NL    I ++  + I
Sbjct: 362 LIYN-CTLISLDVASKDGLNRNRIGQIGADQLEKLLRFNSSIQFLNLCGTSINNDQLKLI 420

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
              L   +++T ID+  N++ S  A  I   ++ NS IT L ++ N IG  G     +V 
Sbjct: 421 MKGLNDGKSLTMIDISQNDLDSNAAEIIVSNIQ-NSNITELYMSSNQIGDVGLSYFQDV- 478

Query: 468 KFHGN---INTLKLGWCQIGASG-AEFVADMLRYNNTISILDLRANGLRDEVCSGC--NG 521
             H     + TL L   +I   G A F   M +  N   ++      L D    G   N 
Sbjct: 479 GLHSKLYPLETLDLSQNKITTRGLAGFFQSMHKNQNLHKLI------LNDNNFQGIQMNK 532

Query: 522 LSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
           ++ F      ++H+ F   C    +G   +A   +  N+ LT ++L  N++R+ GA ++A
Sbjct: 533 IAEFLHENTGIQHLSF-ERCEIQPEGVSSIAYGLE-KNKNLTYLNLKENKVRNQGAKSLA 590

Query: 582 QALKANEDVAVTSLNL 597
           +AL     + V  L+L
Sbjct: 591 EALSHKSHLQVLDLSL 606



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 137/318 (43%), Gaps = 65/318 (20%)

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           +S+K +L + D+   S+ +K A+ ++E +K       + L  N +G++GA  +++ L+ N
Sbjct: 281 TSKKRQLKLQDL---SLGSKSAYLISEILKESDHFCRLYLDKNQVGNQGAYFLSEMLQVN 337

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA------YNPIGADGAKALSEVLK 468
            ++  +D+ GNNI  +G   + R L  N  + SLD+A       N IG  GA  L ++L+
Sbjct: 338 SSLIHLDVSGNNIGPEGFEVLFRSLIYNCTLISLDVASKDGLNRNRIGQIGADQLEKLLR 397

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS----------- 517
           F+ +I  L L    I     + +   L    +++++D+  N L                 
Sbjct: 398 FNSSIQFLNLCGTSINNDQLKLIMKGLNDGKSLTMIDISQNDLDSNAAEIIVSNIQNSNI 457

Query: 518 ----------GCNGLSFF-----HSAIYSLKHM--------------LFYSLCINY---- 544
                     G  GLS+F     HS +Y L+ +               F S+  N     
Sbjct: 458 TELYMSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNKITTRGLAGFFQSMHKNQNLHK 517

Query: 545 -------LQGAKC--LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
                   QG +   +A+ F   N  +  +     EI+ +G  +IA  L+ N++  +T L
Sbjct: 518 LILNDNNFQGIQMNKIAE-FLHENTGIQHLSFERCEIQPEGVSSIAYGLEKNKN--LTYL 574

Query: 596 NLANNFLTKFGQSALTDA 613
           NL  N +   G  +L +A
Sbjct: 575 NLKENKVRNQGAKSLAEA 592



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           +L    ++D+S       GL    +S+  NQ   ++    N      +      L  N  
Sbjct: 483 KLYPLETLDLSQNKITTRGLAGFFQSMHKNQNLHKLILNDNNFQGIQMNKIAEFLHENTG 542

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           ++ L+     I  EGV  +   L  N  +  L L    +R++GAK++AE L + S L+VL
Sbjct: 543 IQHLSFERCEIQPEGVSSIAYGLEKNKNLTYLNLKENKVRNQGAKSLAEALSHKSHLQVL 602

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGANALAKGLEGNKSLRELHLH 338
           +L+   I+  G  +LA AL + S++ SL+L  N     +GA  +   LE N  +R++++ 
Sbjct: 603 DLSLCKIEDEGGMALAAALTK-SSLYSLNLRENSLHDCVGA-LICSSLEKNTYIRKINVE 660

Query: 339 GNSIG 343
            N I 
Sbjct: 661 RNPIN 665


>gi|399497996|emb|CCG20326.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   GI+AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++GIRA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGIRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAMANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRHEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGIRAFGKFLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL+++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAMANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492


>gi|407402853|gb|EKF29300.1| hypothetical protein MOQ_006924, partial [Trypanosoma cruzi
           marinkellei]
          Length = 486

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 156/302 (51%), Gaps = 4/302 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   ++  EG  A+A ++  ++ 
Sbjct: 97  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNEIGKEGCDALANVVNVSTK 155

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 156 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNAYLKSL 215

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A  +K  K L  + L 
Sbjct: 216 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNKCLTDLTLG 275

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +A+ LK+N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 276 NNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANP 335

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 336 IGSVGADEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 395

Query: 513 DE 514
           +E
Sbjct: 396 NE 397



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 3/308 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG E
Sbjct: 138 IGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHE 197

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGFT 292
           G   L   L  NA ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G  
Sbjct: 198 GAALLFRALEKNAYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQ 257

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +A A+  N  +  L L  N      A ALA+ L+ N +L  L L  N++   G+R L  
Sbjct: 258 LIANAVKGNKCLTDLTLGNNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILAR 317

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA  
Sbjct: 318 DGLANNMFLVSLSLSANPIGSVGADEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASL 377

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           +    T+  ++L GN + ++ A  ++R + ++  I+ +DL+ N IG  GA  L +  + +
Sbjct: 378 IAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQLN 437

Query: 471 GNINTLKL 478
             I++L L
Sbjct: 438 ARISSLLL 445



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 104 VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNEIGKEGCDALANVVNVSTKLQLLDIR 162

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N+ L+ L+L+ N I
Sbjct: 163 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNAYLKSLDLSLNEI 222

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GNK L +L L GN+   +
Sbjct: 223 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNKCLTDLTL-GNNNATD 281

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 282 AAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGA 341

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +  +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 342 DEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 401

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS  +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 402 LSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNSI 450



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSV---ITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I++    I  +    I R + D      +  +DL  N +G +  + ++ +L+    +  +
Sbjct: 73  IEMAWTRITPELCEGICRTIVDRDADVPVRVVDLIDNQLGPEQTQKIASMLE-SSTVRDV 131

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L + +IG  G + +A+++  +  + +LD+R NGL     + C  +     +I     + 
Sbjct: 132 LLRYNEIGKEGCDALANVVNVSTKLQLLDIRGNGL----TAAC--VRKLLKSISMSTALT 185

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
              L  N +  +GA  L ++ +  N  L S+DL+ NEI   GA +IA  L
Sbjct: 186 RLGLSANKIGHEGAALLFRALEK-NAYLKSLDLSLNEIGPSGAESIAHLL 234



 Score = 40.0 bits (92), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 11/186 (5%)

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  +DL  N +  +    IA +L+ ++V   L L YN IG +G  AL+ V+     +  L
Sbjct: 101 VRVVDLIDNQLGPEQTQKIASMLESSTVRDVL-LRYNEIGKEGCDALANVVNVSTKLQLL 159

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            +    + A+    +   +  +  ++ L L AN +      G  G +    A+    ++ 
Sbjct: 160 DIRGNGLTAACVRKLLKSISMSTALTRLGLSANKI------GHEGAALLFRALEKNAYLK 213

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
              L +N +   GA+ +A    +    L ++ L  N +   G   IA A+K N+   +T 
Sbjct: 214 SLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNK--CLTD 271

Query: 595 LNLANN 600
           L L NN
Sbjct: 272 LTLGNN 277


>gi|157427717|ref|NP_001098765.1| nucleotide-binding oligomerization domain-containing protein 2 [Sus
           scrofa]
 gi|156623044|dbj|BAF76325.1| nucleotide-binding oligomerization domain 2 [Sus scrofa]
          Length = 1013

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 137/272 (50%), Gaps = 4/272 (1%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V    V  L+L+   +      A+A +L++      L+L++N +   G   L   L   +
Sbjct: 732 VRRLNVGHLKLTFCSVGPAECAALAFVLRHLQWPVALQLDHNSVGDIGVEQLLPCL---N 788

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 789 VCKALYLRDNNISDRGFCKLVEHALCCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLA 848

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +GNN  +A GA  +A+ ++    L ++  + N +GD+GA+ +A+AL+ N+++  + L
Sbjct: 849 -LRLGNNHFTAVGAQVLAQGLRANTPLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSL 907

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GNNI S GA A+A +L+ N  +  L L  N +  +G  +L+  L+ + ++  LKL    
Sbjct: 908 VGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNH 967

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           + + GAE +   L  N+TI  + LR N    E
Sbjct: 968 VTSRGAEALLQALEQNDTILEVWLRGNNFSPE 999



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 6/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +++F + G       AF  VL+       L L  N +GD GV+ L   L  N   + L L
Sbjct: 741  KLTFCSVGPAECAALAF--VLRHLQWPVALQLDHNSVGDIGVEQLLPCL--NV-CKALYL 795

Query: 254  SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               ++ D G   + E       L+ L L NN +      S+A  L       +L L  N+
Sbjct: 796  RDNNISDRGFCKLVEHALCCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLALRLGNNH 855

Query: 314  GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              A+GA  LA+GL  N  L+ L   GN +GD+G +AL   L   +  L  L +  N+I +
Sbjct: 856  FTAVGAQVLAQGLRANTPLQFLGFWGNQVGDKGAQALAEALRDNQS-LKWLSLVGNNIGS 914

Query: 374  KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             GA  +A  ++   +L  + L  N + DEG   +A  L++N ++  + L  N++ S+GA 
Sbjct: 915  VGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAE 974

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            A+ + L+ N  I  + L  N    +  + LS+
Sbjct: 975  ALLQALEQNDTILEVWLRGNNFSPEETEQLSQ 1006



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R F ++ +   +F   G   LA+ L  N   + + F  N +   G +A    L+ N +LK
Sbjct: 844 RNFLALRLGNNHFTAVGAQVLAQGLRANTPLQFLGFWGNQVGDKGAQALAEALRDNQSLK 903

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L GN IG  G + L  +L  N  +E L L    ++DEG  ++A  L+ NS L+VL+L
Sbjct: 904 WLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKL 963

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +NN +   G  +L +AL +N TI  + L GN
Sbjct: 964 SNNHVTSRGAEALLQALEQNDTILEVWLRGN 994



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G   L E     +  ++++   N +T     +   +L        L L  N    
Sbjct: 799 NISDRGFCKLVEHALCCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLALRLGNNHFTA 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L   L  N  ++ L      + D+GA+A+AE L++N  L+ L L  N I   G  
Sbjct: 859 VGAQVLAQGLRANTPLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQ 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GLE N SL+ L L  N +   G  AL+ 
Sbjct: 919 ALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQ 978

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GNN
Sbjct: 979 ALEQNDTILEVWLRGNN 995



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G ++  +  Q L E  ++ ++   + + G N G  G   LA  L  N   EE+    
Sbjct: 878  GFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEE 937

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N +   G+ +    L+ N +LK L LS N +   G + L   L  N  +  + L   +  
Sbjct: 938  NHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQALEQNDTILEVWLRGNNFS 997

Query: 260  DEGAKAIAE 268
             E  + +++
Sbjct: 998  PEETEQLSQ 1006


>gi|149706081|ref|XP_001499616.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Equus caballus]
          Length = 953

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K +  L L+ N I D G R + S L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLHEELTKYKIVTFLGLYKNQITDVGARYIASILDECKG-LMYLKLGENKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A 
Sbjct: 803 CLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAW 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   + D L+ 
Sbjct: 863 ALQQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGVAQLVDALQK 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I  + L  N ++ E
Sbjct: 923 NTGIMEICLNGNLIKPE 939



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 1/177 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  +  L +  N I+  GA ++A  +  CK L+++ L
Sbjct: 733 IRLSVNQITDSGVKVLHEELTKYK-IVTFLGLYKNQITDVGARYIASILDECKGLMYLKL 791

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +++I  + + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 792 GENKITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNG 851

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           I  +G K+L+  L+ + ++    L   ++    AE +A+ML+ N T+  L L  N +
Sbjct: 852 ISTEGGKSLAWALQQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 39/273 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S     L ++ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----HLTIIRLSVNQITDSGVKVLHEELTKYKIVTFLGLYKNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +  + LG N I S+G   +A  +K++  I  + +  N IG +GAKA +E
Sbjct: 775 YIASILDECKGLMYLKLGENKITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DEV          
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNTSLRIFWLTKNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +  AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGVAQLVDALQ 921

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 618
            N  +    LN   N +         D K +V+
Sbjct: 922 KNTGIMEICLN--GNLIKPEEAKVFEDEKRIVF 952



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L    + D GA+ IA +L     L  L
Sbjct: 730 LTIIRLSVNQITDSGVKVLHEELTKYKIVTFLGLYKNQITDVGARYIASILDECKGLMYL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I                               G   LA  ++ +KS+ E+ + G
Sbjct: 790 KLGENKITSE----------------------------GGKCLALAVKNSKSIFEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG +A    L +    L  L +  N IS +G   +A  ++   SL    L  N++
Sbjct: 822 NRIGDEGAKAFAEALRNHPS-LTNLSLAFNGISTEGGKSLAWALQQNTSLRIFWLTKNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +   L+ N+ I  + L  N I  + 
Sbjct: 881 DDEVAESLAEMLKVNQTLKHLWLIQNQITAKGVAQLVDALQKNTGIMEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVFED 946



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 93/202 (46%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     L  L L 
Sbjct: 733 IRLSVNQITDSGVKVLHEELTKYKIVTFLGLYKNQITDVGARYIASILDECKGLMYLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 ENKITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+++R   L  N      A +LA+ L+ N++L+ L L  N I  +G
Sbjct: 853 STEGGKSLAWALQQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           +  L+  L    G + +   GN
Sbjct: 913 VAQLVDALQKNTGIMEICLNGN 934



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 5/205 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L ++ L+ N I  SG   L E L +   +  L L  N    +GA  +A  
Sbjct: 720 VRELQPCFSHLTIIRLSVNQITDSGVKVLHEELTKYKIVTFLGLYKNQITDVGARYIASI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   + + K   ++ ++G   N I  +GA   AE +
Sbjct: 780 LDECKGLMYLKLGENKITSEGGKCLALAVKNSK---SIFEVGMWGNRIGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N I  EG + +A AL+QN ++    L  N +  + A ++A +LK N 
Sbjct: 837 RNHPSLTNLSLAFNGISTEGGKSLAWALQQNTSLRIFWLTKNELDDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLK 468
            +  L L  N I A G   L + L+
Sbjct: 897 TLKHLWLIQNQITAKGVAQLVDALQ 921



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 92/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++A  L   +    +    N IT+ G K   
Sbjct: 746 KVLHEELTKYKIVTFLGLYKNQITDVGARYIASILDECKGLMYLKLGENKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A  L+
Sbjct: 806 LAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR+  L  N +D     SLAE L  N T++ L L  N   A G   L   L+ N  
Sbjct: 866 QNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGVAQLVDALQKNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 IMEICLNGNLIKPE 939



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++   V M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 795 KITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGIST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+   L+ N                            +L DE A+
Sbjct: 855 EGGKSLAWALQQNTSLRIFWLTKN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   L +AL +N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGVAQLVDALQKNTGIMEICLNGN 934


>gi|326922059|ref|XP_003207269.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Meleagris gallopavo]
          Length = 951

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 37/262 (14%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+I D G++ L+   S    KLAV+ +  N I+  GA  + E +   + + ++ L
Sbjct: 706 LDLDNNNINDYGVKQLLPCFS----KLAVIRLSVNQITDHGARILYEELSKYQIVSYLGL 761

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ +A  +++  ++  + +G N I S+G   +A+ ++ ++ +  + +  N 
Sbjct: 762 YNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQ 821

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G +GAKA +E L+ H  +  + L +  I   G + +A+ L++NN++ I  L  N L DE
Sbjct: 822 VGDEGAKAFAEALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNNSVKIFWLTKNELDDE 881

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                                            A   A+  K +N+ L  + L  N+I  
Sbjct: 882 --------------------------------AAMSFAEMLK-INKKLVHLWLIQNQITA 908

Query: 575 DGAFAIAQALKANEDVAVTSLN 596
            G   +++ALK N  +    LN
Sbjct: 909 KGVKYLSEALKENTAIKEVCLN 930



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 32/264 (12%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L + ++ D G K   +LL   S L V+ L+ N I   G   L E L +   +  L L 
Sbjct: 706 LDLDNNNINDYGVK---QLLPCFSKLAVIRLSVNQITDHGARILYEELSKYQIVSYLGLY 762

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N    +GA  +AK +E   SL                               + IG N 
Sbjct: 763 NNQITDIGAKYVAKLIEECSSLE-----------------------------YVKIGANK 793

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+++G   +A+ I+   ++  I ++ N +GDEGA+  A+AL+ +  +T + L  N I ++
Sbjct: 794 ITSEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGAKAFAEALRNHPRLTNVSLAFNGITTE 853

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G  +IA  L+ N+ +    L  N +  + A + +E+LK +  +  L L   QI A G ++
Sbjct: 854 GGKSIAEALQHNNSVKIFWLTKNELDDEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKY 913

Query: 491 VADMLRYNNTISILDLRANGLRDE 514
           +++ L+ N  I  + L  N +  E
Sbjct: 914 LSEALKENTAIKEVCLNGNLISQE 937



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 98/201 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  S + +      D G  ++A+ +    + E V   AN IT+ G K   
Sbjct: 744 RILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLA 803

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             +Q +  +  + + GN +GDEG K   + L ++  +  + L+   +  EG K+IAE L+
Sbjct: 804 QAIQKSTTMFEIGMWGNQVGDEGAKAFAEALRNHPRLTNVSLAFNGITTEGGKSIAEALQ 863

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N+ +++  L  N +D     S AE L  N  +  L L  N   A G   L++ L+ N +
Sbjct: 864 HNNSVKIFWLTKNELDDEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTA 923

Query: 332 LRELHLHGNSIGDEGIRALMS 352
           ++E+ L+GN I  E  +A  S
Sbjct: 924 IKEVCLNGNLISQEEAKAFES 944



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 4/204 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           KQ L  F+K     + + +S     D G   L E L   Q    +    N IT  G K  
Sbjct: 719 KQLLPCFSK----LAVIRLSVNQITDHGARILYEELSKYQIVSYLGLYNNQITDIGAKYV 774

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++   +L+ + +  N I  EG KCL   +  +  +  + +    + DEGAKA AE L
Sbjct: 775 AKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGAKAFAEAL 834

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +N+  L  + L  N I   G  S+AEAL  N++++   L  N      A + A+ L+ NK
Sbjct: 835 RNHPRLTNVSLAFNGITTEGGKSIAEALQHNNSVKIFWLTKNELDDEAAMSFAEMLKINK 894

Query: 331 SLRELHLHGNSIGDEGIRALMSGL 354
            L  L L  N I  +G++ L   L
Sbjct: 895 KLVHLWLIQNQITAKGVKYLSEAL 918



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 32/166 (19%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + M G   GDEG    AE+L  +     VS A NGIT  G K+    LQ N ++K   L+
Sbjct: 815 IGMWGNQVGDEGAKAFAEALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNNSVKIFWLT 874

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N                            +L DE A + AE+LK N  L  L L  N I
Sbjct: 875 KN----------------------------ELDDEAAMSFAEMLKINKKLVHLWLIQNQI 906

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
              G   L+EAL EN+ I+ + LNGN    L +   AK  E  + +
Sbjct: 907 TAKGVKYLSEALKENTAIKEVCLNGN----LISQEEAKAFESEERI 948



 Score = 45.8 bits (107), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 17/228 (7%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           + +W+   +  I +   EK+     +      I L   N +S   SAI+ V+       +
Sbjct: 649 NFVWM---LRCIYETQNEKVGKLAAKRMHANYIKLTYCNAYSADCSAISFVMHHFQKRLA 705

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL  N I   G K L   L     +  ++L   QI   GA  + + L     +S L L 
Sbjct: 706 LDLDNNNINDYGVKQL---LPCFSKLAVIRLSVNQITDHGARILYEELSKYQIVSYLGLY 762

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSI 565
            N + D       G  +    I     + +  +  N +  +G KCLAQ+ +  +  +  I
Sbjct: 763 NNQITD------IGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQ-KSTTMFEI 815

Query: 566 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            +  N++ D+GA A A+AL+ +    +T+++LA N +T  G  ++ +A
Sbjct: 816 GMWGNQVGDEGAKAFAEALRNHP--RLTNVSLAFNGITTEGGKSIAEA 861


>gi|399497948|emb|CCG20302.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A 
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAD 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG  +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  +  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITADAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL--LNVNGNLISEEGVDELKE 489



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITADAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNLISEEGVDELKEIFKKSPEML 498



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 61/342 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  K  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIKAEEAEELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
               G N   A    +V +E ++ C +L ++NL  N +G++G       L+    +  + 
Sbjct: 190 DFVAGRNEAEALDVMNVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELF 248

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    
Sbjct: 249 LMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSST 308

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSL 540
           ++G+ G   + + L   + +  LDLR N    EV    C  LS         KH     +
Sbjct: 309 RVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEI 359

Query: 541 CINYL----QGAKCLAQSFK----------------------------VVNEALTSIDLA 568
            ++YL    +GA  +A + K                               + L  + L 
Sbjct: 360 YLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITADAASAIASCIAAKQLLAKLSLG 419

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            NE++D+GA  IA+AL+ +  +    +N  +N L + G   L
Sbjct: 420 ENELKDEGAIQIAKALEGHSHLIEVDMN--SNALRRAGARVL 459


>gi|147882995|gb|ABQ51814.1| RAN GTPase-activating protein 1 [Nicotiana benthamiana]
          Length = 534

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 3/283 (1%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     +  L   
Sbjct: 214 LNLSNNALGEKGVRAFGALLKSQQNLEELYLMNDGISEEAAQAVCELIPSTDKLRILHFH 273

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AI+EL+K++  L     ++  +   G  +L++AL E   ++ L L  N  
Sbjct: 274 NNMTGDEGALAISELVKHSPALEDFRCSSTRVGSEGGVALSQALGECRNLKKLDLRDNMF 333

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L E++L   ++ DEG  AL + L      L VL++  N I+ K
Sbjct: 334 GVEAGIALSKVLSIFSDLTEIYLSYLNLEDEGSIALANALKGSAPSLEVLEMDGNDITVK 393

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGAS 433
            A  +A  I   + L  + L  N++ DEGA  IA AL+     +T +D+  N I   GA 
Sbjct: 394 AAPVLAACIAAKQFLTKLRLAENELKDEGAILIAKALEDGHGQLTELDMSTNAIRRAGAR 453

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
            +A+ +        L +  N I  +G   + ++  F  +IN L
Sbjct: 454 CLAQAVVSKLGFKVLSINGNFISDEGIDEVKDI--FKNSINVL 494



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 5/287 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+ LNLS N +G++GV+    +L     +E L L +  + +E A+A+ EL+ +   LR+L
Sbjct: 211 LRYLNLSNNALGEKGVRAFGALLKSQQNLEELYLMNDGISEEAAQAVCELIPSTDKLRIL 270

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  +++E +  +  +     +    G+ G  AL++ L   ++L++L L  
Sbjct: 271 HFHNNMTGDEGALAISELVKHSPALEDFRCSSTRVGSEGGVALSQALGECRNLKKLDLRD 330

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMND 398
           N  G E   AL S + S    L  + +   ++  +G+  +A  +K +  SL  + +  ND
Sbjct: 331 NMFGVEAGIAL-SKVLSIFSDLTEIYLSYLNLEDEGSIALANALKGSAPSLEVLEMDGND 389

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDLAYNPIGA 457
           I  + A  +A  +   + +T + L  N +  +GA  IA+ L+D +  +T LD++ N I  
Sbjct: 390 ITVKAAPVLAACIAAKQFLTKLRLAENELKDEGAILIAKALEDGHGQLTELDMSTNAIRR 449

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            GA+ L++ +        L +    I   G + V D+  + N+I++L
Sbjct: 450 AGARCLAQAVVSKLGFKVLSINGNFISDEGIDEVKDI--FKNSINVL 494



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 12/288 (4%)

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           G   LR L+L  N++G++G+RA  + L S++  L  L + N+ IS + A  V E I +  
Sbjct: 207 GACDLRYLNLSNNALGEKGVRAFGALLKSQQN-LEELYLMNDGISEEAAQAVCELIPSTD 265

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            L  ++ + N  GDEGA  I++ +K +  +         + S+G  A+++ L +   +  
Sbjct: 266 KLRILHFHNNMTGDEGALAISELVKHSPALEDFRCSSTRVGSEGGVALSQALGECRNLKK 325

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTISILDL 506
           LDL  N  G +   ALS+VL    ++  + L +  +   G+  +A+ L+ +  ++ +L++
Sbjct: 326 LDLRDNMFGVEAGIALSKVLSIFSDLTEIYLSYLNLEDEGSIALANALKGSAPSLEVLEM 385

Query: 507 RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTS 564
             N +               + I + + +    L  N L  +GA  +A++ +  +  LT 
Sbjct: 386 DGNDIT------VKAAPVLAACIAAKQFLTKLRLAENELKDEGAILIAKALEDGHGQLTE 439

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           +D++ N IR  GA  +AQA+ +     V S+N   NF++  G   + D
Sbjct: 440 LDMSTNAIRRAGARCLAQAVVSKLGFKVLSIN--GNFISDEGIDEVKD 485



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 33/253 (13%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L ++NL  N +G++G       LK  + +  + L  + I  + A A+  ++     +  L
Sbjct: 211 LRYLNLSNNALGEKGVRAFGALLKSQQNLEELYLMNDGISEEAAQAVCELIPSTDKLRIL 270

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
               N  G +GA A+SE++K    +   +    ++G+ G   ++  L     +  LDLR 
Sbjct: 271 HFHNNMTGDEGALAISELVKHSPALEDFRCSSTRVGSEGGVALSQALGECRNLKKLDLRD 330

Query: 509 NGLRDE-------VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVN-- 559
           N    E       V S  + L+  + +  +L+     +L  N L+G+   A S +V+   
Sbjct: 331 NMFGVEAGIALSKVLSIFSDLTEIYLSYLNLEDEGSIALA-NALKGS---APSLEVLEMD 386

Query: 560 -------------------EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
                              + LT + LA NE++D+GA  IA+AL+      +T L+++ N
Sbjct: 387 GNDITVKAAPVLAACIAAKQFLTKLRLAENELKDEGAILIAKALEDGHG-QLTELDMSTN 445

Query: 601 FLTKFGQSALTDA 613
            + + G   L  A
Sbjct: 446 AIRRAGARCLAQA 458


>gi|348587430|ref|XP_003479471.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like
           [Cavia porcellus]
          Length = 1022

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 3/258 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +D+S    GD GL  L E+L       + +     G++         VL     L 
Sbjct: 728 ALTELDLSDNILGDLGLGALCETLQSPGCGIQRLWLGRCGLSHQCCSDLSSVLSCGRKLA 787

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G   LC  L      + +L L S  L     + +A +L  +  L  L 
Sbjct: 788 ELDLSDNPLGDFGASLLCQGLAHPCCTLNKLWLVSCGLTSACCEDLASVLSTSCSLTRLY 847

Query: 281 LNNNMIDYSGFTSLA-EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +  N +  +G ++L  +A  + S ++ L L  +    +G +ALA  L   +SL  L+L G
Sbjct: 848 IGENALGDTGVSTLCGKAQWQESHLQKLGLVNSGLTFMGCSALASVLRTTRSLTHLYLRG 907

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N++GD G++ L  GL     +L +L++ N S+++   + ++  + + +SL  ++L  ND+
Sbjct: 908 NALGDAGLKLLCEGLLHPGCELRMLELDNCSLTSHSCWDLSTVLTSSRSLRKLSLSNNDL 967

Query: 400 GDEGAEKIADALKQNRTI 417
           GD G   + + L+Q   +
Sbjct: 968 GDLGVTMLCEVLRQGACV 985



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRD 260
           +T +  +     L +  AL  L+LS N +GD G+  LC+ L     G++RL L    L  
Sbjct: 711 LTPSFCQGLFSALSTTWALTELDLSDNILGDLGLGALCETLQSPGCGIQRLWLGRCGLSH 770

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGA 319
           +    ++ +L     L  L+L++N +   G + L + L     T+  L L      +   
Sbjct: 771 QCCSDLSSVLSCGRKLAELDLSDNPLGDFGASLLCQGLAHPCCTLNKLWLVSCGLTSACC 830

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             LA  L  + SL  L++  N++GD G+  L      ++  L  L + N+ ++  G   +
Sbjct: 831 EDLASVLSTSCSLTRLYIGENALGDTGVSTLCGKAQWQESHLQKLGLVNSGLTFMGCSAL 890

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARV 438
           A  ++  +SL  + L  N +GD G + + +  L     +  ++L   ++ S     ++ V
Sbjct: 891 ASVLRTTRSLTHLYLRGNALGDAGLKLLCEGLLHPGCELRMLELDNCSLTSHSCWDLSTV 950

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           L  +  +  L L+ N +G  G   L EVL+
Sbjct: 951 LTSSRSLRKLSLSNNDLGDLGVTMLCEVLR 980


>gi|449664430|ref|XP_002170530.2| PREDICTED: uncharacterized protein C14orf166B homolog [Hydra
           magnipapillata]
          Length = 383

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 124/273 (45%), Gaps = 29/273 (10%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
           T EE++    G  A G KA    L SN     LNL  N IG EG K +  +L +N  +  
Sbjct: 39  TEEEMNLQYYGAGAKGAKAISAALLSNTVTLELNLKENHIGLEGSKSISAMLKENCYILD 98

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           + LS+  +  EG + ++E+L  N  L+ L ++ N    S    L +A   N  +  L L+
Sbjct: 99  INLSANFMGPEGCRYVSEMLHQNISLKRLNISKNNFGDSVGQYLCDAFKNNFKLTWLDLS 158

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N      A A++ G++GN +L  L+L  N    + ++ +  GL +    L VLDI    
Sbjct: 159 SNGLSDKVAAAISPGIDGNDALEYLNLSWNQFRGKAMQNIAMGLRANCA-LKVLDIS--- 214

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                               W     N   +EGA  +A+ALK N T+  +D+  N I   
Sbjct: 215 --------------------W-----NGFSNEGAIGLAEALKVNNTLIELDISNNRISMN 249

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           G  AIA+ L  N+ +  L + +NPI  +GA  L
Sbjct: 250 GCIAIAKSLDLNNTLEVLKMNFNPITPNGANTL 282



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 127/251 (50%), Gaps = 1/251 (0%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           +GAKAI+  L +N++   L L  N I   G  S++  L EN  I  ++L+ N+ G  G  
Sbjct: 53  KGAKAISAALLSNTVTLELNLKENHIGLEGSKSISAMLKENCYILDINLSANFMGPEGCR 112

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            +++ L  N SL+ L++  N+ GD   + L     +   KL  LD+ +N +S K A  ++
Sbjct: 113 YVSEMLHQNISLKRLNISKNNFGDSVGQYLCDAFKNN-FKLTWLDLSSNGLSDKVAAAIS 171

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             I    +L ++NL  N    +  + IA  L+ N  +  +D+  N   ++GA  +A  LK
Sbjct: 172 PGIDGNDALEYLNLSWNQFRGKAMQNIAMGLRANCALKVLDISWNGFSNEGAIGLAEALK 231

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +  LD++ N I  +G  A+++ L  +  +  LK+ +  I  +GA  + + +   + 
Sbjct: 232 VNNTLIELDISNNRISMNGCIAIAKSLDLNNTLEVLKMNFNPITPNGANTLLNSISNKSD 291

Query: 501 ISILDLRANGL 511
            +I +L   G+
Sbjct: 292 SAIKELHLKGV 302



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 39/288 (13%)

Query: 313 YG-GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI--GNN 369
           YG GA GA A++  L  N    EL+L  N IG EG +++ + L   K    +LDI    N
Sbjct: 48  YGAGAKGAKAISAALLSNTVTLELNLKENHIGLEGSKSISAML---KENCYILDINLSAN 104

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +  +G  +V+E +    SL  +N+  N+ GD   + + DA K N  +T +DL  N +  
Sbjct: 105 FMGPEGCRYVSEMLHQNISLKRLNISKNNFGDSVGQYLCDAFKNNFKLTWLDLSSNGLSD 164

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           K A+AI+  +  N  +  L+L++N       + ++  L+ +  +  L + W      GA 
Sbjct: 165 KVAAAISPGIDGNDALEYLNLSWNQFRGKAMQNIAMGLRANCALKVLDISWNGFSNEGAI 224

Query: 490 FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK 549
            +A+ L+ NNT+  LD+  N +                                 + G  
Sbjct: 225 GLAEALKVNNTLIELDISNNRIS--------------------------------MNGCI 252

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
            +A+S   +N  L  + + FN I  +GA  +  ++    D A+  L+L
Sbjct: 253 AIAKSLD-LNNTLEVLKMNFNPITPNGANTLLNSISNKSDSAIKELHL 299



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 119/227 (52%), Gaps = 11/227 (4%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL     G +GA+ I+ AL  N     ++L  N+I  +G+ +I+ +LK+N  I  ++L+
Sbjct: 43  MNLQYYGAGAKGAKAISAALLSNTVTLELNLKENHIGLEGSKSISAMLKENCYILDINLS 102

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +G +G + +SE+L  + ++  L +     G S  +++ D  + N  ++ LDL +NGL
Sbjct: 103 ANFMGPEGCRYVSEMLHQNISLKRLNISKNNFGDSVGQYLCDAFKNNFKLTWLDLSSNGL 162

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG--AKCLAQSFKVVNEALTSIDLAF 569
            D+V +           I     + + +L  N  +G   + +A   +  N AL  +D+++
Sbjct: 163 SDKVAAA------ISPGIDGNDALEYLNLSWNQFRGKAMQNIAMGLR-ANCALKVLDISW 215

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           N   ++GA  +A+ALK N    +  L+++NN ++  G  A+  + DL
Sbjct: 216 NGFSNEGAIGLAEALKVNN--TLIELDISNNRISMNGCIAIAKSLDL 260



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 36/281 (12%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            E++L     G +G +A+ + L S    L  L++  N I  +G+  ++  +K    +L I
Sbjct: 41  EEMNLQYYGAGAKGAKAISAALLSNTVTLE-LNLKENHIGLEGSKSISAMLKENCYILDI 99

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           NL  N +G EG   +++ L QN ++  +++  NN        +    K+N  +T LDL+ 
Sbjct: 100 NLSANFMGPEGCRYVSEMLHQNISLKRLNISKNNFGDSVGQYLCDAFKNNFKLTWLDLSS 159

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N +    A A+S  +  +  +  L L W Q      + +A  LR N  + +LD+  NG  
Sbjct: 160 NGLSDKVAAAISPGIDGNDALEYLNLSWNQFRGKAMQNIAMGLRANCALKVLDISWNGFS 219

Query: 513 DEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEI 572
           +E                                GA  LA++ K VN  L  +D++ N I
Sbjct: 220 NE--------------------------------GAIGLAEALK-VNNTLIELDISNNRI 246

Query: 573 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             +G  AIA++L  N  + V  +N   N +T  G + L ++
Sbjct: 247 SMNGCIAIAKSLDLNNTLEVLKMNF--NPITPNGANTLLNS 285



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 1/219 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++   + G EG   ++  L  N    +++ +AN +   G +    +L  NI+LK LN+S
Sbjct: 71  LNLKENHIGLEGSKSISAMLKENCYILDINLSANFMGPEGCRYVSEMLHQNISLKRLNIS 130

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GD   + LCD   +N  +  L LSS  L D+ A AI+  +  N  L  L L+ N  
Sbjct: 131 KNNFGDSVGQYLCDAFKNNFKLTWLDLSSNGLSDKVAAAISPGIDGNDALEYLNLSWNQF 190

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                 ++A  L  N  ++ L ++ N     GA  LA+ L+ N +L EL +  N I   G
Sbjct: 191 RGKAMQNIAMGLRANCALKVLDISWNGFSNEGAIGLAEALKVNNTLIELDISNNRISMNG 250

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
             A+   L      L VL +  N I+  GA  +   I N
Sbjct: 251 CIAIAKSL-DLNNTLEVLKMNFNPITPNGANTLLNSISN 288


>gi|399497936|emb|CCG20296.1| Ran GTPase activating protein 2 [Solanum stenophyllidium]
          Length = 553

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A 
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAD 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG  +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  +  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITADAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL--LNVNGNLISEEGVDELKE 489



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITADAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNLISEEGVDELKEIFKKSPEML 498



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 128/309 (41%), Gaps = 51/309 (16%)

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDI-----GNNSISAKGAFHV-AEYIKNCKSLLWINL 394
           S G +  R     L++ K +L  +D+     G N   A    +V +E ++ C +L ++NL
Sbjct: 163 SFGIDAARIAGPILAALKDQLKEVDLSDFVAGRNEAEALDVMNVFSEALEGC-NLKFLNL 221

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N +G++G       L+    +  + L  + I  + A+A++ ++     +  L    N 
Sbjct: 222 SDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNM 281

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            G +GA A++E++K    +   +    ++G+ G   + + L   + +  LDLR N    E
Sbjct: 282 TGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPE 341

Query: 515 V-CSGCNGLSFFHSAIYSLKHMLFYSLCINYL----QGAKCLAQSFK------------- 556
           V    C  LS         KH     + ++YL    +GA  +A + K             
Sbjct: 342 VGLVLCKALS---------KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAG 392

Query: 557 ---------------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 601
                             + L  + L  NE++D+GA  IA+AL+ +  +    +N  +N 
Sbjct: 393 NDITADAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMN--SNA 450

Query: 602 LTKFGQSAL 610
           L + G   L
Sbjct: 451 LRRAGARVL 459


>gi|156392777|ref|XP_001636224.1| predicted protein [Nematostella vectensis]
 gi|156223325|gb|EDO44161.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 8/244 (3%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L T+++S N + D     L ++LVDN  +  + +S   L D G  +IA+ L  N
Sbjct: 9   LKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMVN 68

Query: 274 SILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSLHL-NGNYGGALGANALAKGLEGNKS 331
           + +R LE+   NM   +G  +L E L  N+TI  L L +GN G + GA  +A GL  N +
Sbjct: 69  TTVRTLEIIGRNMTAEAG-RALGEMLRHNTTITCLSLCDGNIGDS-GAQGIASGLSQNTT 126

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L ++ +  + IG  G+ AL   + +       LD+  N I  KGA  +A+ IKN   L +
Sbjct: 127 LEKIQIEYSCIGATGVSALAKVIQNATH----LDLSRNIIGTKGAKAIAKVIKNSCKLKY 182

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + +   +I   G   +A AL +N+ +  + +    I  +G   +AR +  N  +  L + 
Sbjct: 183 LRIDCCNIDVLGVRDLAKALSKNKNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTIT 242

Query: 452 YNPI 455
           YN I
Sbjct: 243 YNNI 246



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 123/244 (50%), Gaps = 4/244 (1%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LKNNS L  ++++ N +  +  + LAE L++N+++  ++++G Y G  G  ++AK L  N
Sbjct: 9   LKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMVN 68

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            ++R L + G ++  E  RAL   L      +  L + + +I   GA  +A  +    +L
Sbjct: 69  TTVRTLEIIGRNMTAEAGRALGEMLR-HNTTITCLSLCDGNIGDSGAQGIASGLSQNTTL 127

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             I +  + IG  G   +A  + QN T   +DL  N I +KGA AIA+V+K++  +  L 
Sbjct: 128 EKIQIEYSCIGATGVSALAKVI-QNAT--HLDLSRNIIGTKGAKAIAKVIKNSCKLKYLR 184

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           +    I   G + L++ L  + N+  L +    I   G   +A  +  N ++ +L +  N
Sbjct: 185 IDCCNIDVLGVRDLAKALSKNKNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYN 244

Query: 510 GLRD 513
            + +
Sbjct: 245 NISE 248



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 4/210 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + V +SG   GD G+  +A++L  N T   +      +TA   +A   +L+ N  +  
Sbjct: 42  SLNDVYISGEYLGDAGVASIAKALMVNTTVRTLEIIGRNMTAEAGRALGEMLRHNTTITC 101

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    IGD G + +   L  N  +E++Q+    +   G  A+A++++N +    L+L+
Sbjct: 102 LSLCDGNIGDSGAQGIASGLSQNTTLEKIQIEYSCIGATGVSALAKVIQNAT---HLDLS 158

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N+I   G  ++A+ +  +  ++ L ++      LG   LAK L  NK+L EL +    I
Sbjct: 159 RNIIGTKGAKAIAKVIKNSCKLKYLRIDCCNIDVLGVRDLAKALSKNKNLEELSVACAGI 218

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            DEG+  L   ++  K  L VL I  N+IS
Sbjct: 219 DDEGMCELARSVAKNK-SLQVLTITYNNIS 247



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 4/238 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++D+S  +  D     LAE L  N +  +V  +   +  AG+ +    L  N  ++TL
Sbjct: 15  LSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMVNTTVRTL 74

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            + G  +  E  + L ++L  N  +  L L   ++ D GA+ IA  L  N+ L  +++  
Sbjct: 75  EIIGRNMTAEAGRALGEMLRHNTTITCLSLCDGNIGDSGAQGIASGLSQNTTLEKIQIEY 134

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           + I  +G ++LA+ +++N+T   L L+ N  G  GA A+AK ++ +  L+ L +   +I 
Sbjct: 135 SCIGATGVSALAK-VIQNAT--HLDLSRNIIGTKGAKAIAKVIKNSCKLKYLRIDCCNID 191

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
             G+R L   LS  K  L  L +    I  +G   +A  +   KSL  + +  N+I +
Sbjct: 192 VLGVRDLAKALSKNK-NLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNNISE 248



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 119/239 (49%), Gaps = 8/239 (3%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L+ +DI  NS++   A  +AE + +  SL  + +    +GD G   IA AL  N T+ T+
Sbjct: 15  LSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMVNTTVRTL 74

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           ++ G N+ ++   A+  +L+ N+ IT L L    IG  GA+ ++  L  +  +  +++ +
Sbjct: 75  EIIGRNMTAEAGRALGEMLRHNTTITCLSLCDGNIGDSGAQGIASGLSQNTTLEKIQIEY 134

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
             IGA+G   +A +++     + LDL  N +  +   G   ++        LK++     
Sbjct: 135 SCIGATGVSALAKVIQ---NATHLDLSRNIIGTK---GAKAIAKVIKNSCKLKYLRIDCC 188

Query: 541 CINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
            I+ L G + LA++    N+ L  + +A   I D+G   +A+++  N+ + V ++   N
Sbjct: 189 NIDVL-GVRDLAKALS-KNKNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNN 245



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           +LK N T++TID+  N++    AS +A VL DN+ +  + ++   +G  G  ++++ L  
Sbjct: 8   SLKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMV 67

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAI 529
           +  + TL++    + A     + +MLR+N TI+ L L    + D   SG  G++   S  
Sbjct: 68  NTTVRTLEIIGRNMTAEAGRALGEMLRHNTTITCLSLCDGNIGD---SGAQGIASGLSQN 124

Query: 530 YSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
            +L+ +     CI    GA  ++   KV+  A T +DL+ N I   GA AIA+ +K
Sbjct: 125 TTLEKIQIEYSCI----GATGVSALAKVIQNA-THLDLSRNIIGTKGAKAIAKVIK 175



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 7/174 (4%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN  +L  I++ +N + D  A ++A+ L  N ++  + + G  +   G ++IA+ L  N
Sbjct: 9   LKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMVN 68

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + + +L++    + A+  +AL E+L+ +  I  L L    IG SGA+ +A  L  N T+ 
Sbjct: 69  TTVRTLEIIGRNMTAEAGRALGEMLRHNTTITCLSLCDGNIGDSGAQGIASGLSQNTTLE 128

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
            + +  +      C G  G+S     I +  H L  S  I   +GAK +A+  K
Sbjct: 129 KIQIEYS------CIGATGVSALAKVIQNATH-LDLSRNIIGTKGAKAIAKVIK 175



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 31/196 (15%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + L E  +     + + +   N GD G   +A  L  N T E++    + I A G+ 
Sbjct: 84  EAGRALGEMLRHNTTITCLSLCDGNIGDSGAQGIASGLSQNTTLEKIQIEYSCIGATGVS 143

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   V+Q+      L+LS N IG                             +GAKAIA+
Sbjct: 144 ALAKVIQN---ATHLDLSRNIIG----------------------------TKGAKAIAK 172

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           ++KN+  L+ L ++   ID  G   LA+AL +N  +  L +        G   LA+ +  
Sbjct: 173 VIKNSCKLKYLRIDCCNIDVLGVRDLAKALSKNKNLEELSVACAGIDDEGMCELARSVAK 232

Query: 329 NKSLRELHLHGNSIGD 344
           NKSL+ L +  N+I +
Sbjct: 233 NKSLQVLTITYNNISE 248


>gi|399497960|emb|CCG20308.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 205/491 (41%), Gaps = 66/491 (13%)

Query: 34  PLSFAL-PFSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFV 92
           P S  L P S   R   ++R+    ++     R+ R + ++  + NA     V    +F 
Sbjct: 12  PFSIKLWPPSENTRKMLVERMTNNLSSPTIFTRKYRSLSKEEAAKNAEEIEDV----AFT 67

Query: 93  V--------PAGVFVSATFVLWKLVEKLL------MPKPSRPS------KPTAEGMNWSV 132
           +        P G   SA  +  +   KL+      MPKP           PT +   + +
Sbjct: 68  IANQHYEKEPDGDGSSAVQLYARECSKLILEILKKMPKPEDKEISISEVVPTVQETFFDI 127

Query: 133 GAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQT 191
             G      F G    E+++ L    +   ++S +  S R+FG +        L      
Sbjct: 128 SKGKR---AFIGA--EEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQ 182

Query: 192 AEEVS---FAANGITAAGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
            +EV    F A    A  +     F   L+ +  LK LNLS N +G++GV+     L   
Sbjct: 183 LKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQ 241

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE-----ALLE 300
             +E L L +  +  E A A++EL+ +   L+VL  +NNM    G  ++AE      LLE
Sbjct: 242 TNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLE 301

Query: 301 N-----------------------STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +                       S ++ L L  N  G      L K L  +++L E++L
Sbjct: 302 DFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYL 361

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              ++ DEG  A+ + L      LAVL++  N I+A+ A  +A  I   + L  ++L  N
Sbjct: 362 SYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGEN 421

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           ++ DEGA +IA AL+ +  +  +D+  N +   GA  +A+ +        L++  N I  
Sbjct: 422 ELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISE 481

Query: 458 DGAKALSEVLK 468
           +G   L E+ K
Sbjct: 482 EGVDELKEIFK 492



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489


>gi|172046186|sp|Q6ZQY2.2|YV012_HUMAN RecName: Full=Leucine-rich repeat-containing protein LOC400891
          Length = 391

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 30/270 (11%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + L L    L  +GA+A+A  L +N  ++ L+L +N +  +G  +LA AL ++S+I  + 
Sbjct: 82  QELNLRHRGLGPQGARALASSLSSNPYVKRLDLRDNGLCGAGAEALAGALSKSSSIHDVD 141

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G  GA AL   L  N+++R++ L GN + ++                       
Sbjct: 142 LSENQLGVAGAQALCAALTVNQAMRKMQLSGNGLEEQA---------------------- 179

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
                  A H+AE +     L  ++L  N + D+  E +  AL +N  +T +++  N++ 
Sbjct: 180 -------AQHLAELLLAHTDLKSLDLSYNQLNDQAGETLGPALAENTGLTELNVSWNHLR 232

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA A AR L+ N  +  LD++YN  G  GA A+ E LK +  +  L +   +I A GA
Sbjct: 233 GPGAVAFARGLEANIFLKVLDISYNGFGDPGASAVGEALKANNVLEELNMSNNRISAMGA 292

Query: 489 EFVADMLRYNNTISILDLRANGLRDEVCSG 518
             +   LR N T+ IL  R N +R E C G
Sbjct: 293 LSLGLGLRVNQTLRILVSR-NPMRSEGCFG 321



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 21/274 (7%)

Query: 120 PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS--------- 170
           P        NW     T    G  G+L R++      + +  RA S V +S         
Sbjct: 29  PEAEQGPEANWDSDLETEGTDGL-GELVRDTL-----YLRSCRAHSVVPISCFLRQGSAQ 82

Query: 171 -----GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
                 R  G +G   LA SL  N   + +    NG+  AG +A  G L  + ++  ++L
Sbjct: 83  ELNLRHRGLGPQGARALASSLSSNPYVKRLDLRDNGLCGAGAEALAGALSKSSSIHDVDL 142

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N +G  G + LC  L  N  + ++QLS   L ++ A+ +AELL  ++ L+ L+L+ N 
Sbjct: 143 SENQLGVAGAQALCAALTVNQAMRKMQLSGNGLEEQAAQHLAELLLAHTDLKSLDLSYNQ 202

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           ++     +L  AL EN+ +  L+++ N+    GA A A+GLE N  L+ L +  N  GD 
Sbjct: 203 LNDQAGETLGPALAENTGLTELNVSWNHLRGPGAVAFARGLEANIFLKVLDISYNGFGDP 262

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           G  A+   L +    L  L++ NN ISA GA  +
Sbjct: 263 GASAVGEALKANN-VLEELNMSNNRISAMGALSL 295



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 9/216 (4%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL    +G +GA  +A +L  N  +  +DL  N +   GA A+A  L  +S I  +DL+
Sbjct: 84  LNLRHRGLGPQGARALASSLSSNPYVKRLDLRDNGLCGAGAEALAGALSKSSSIHDVDLS 143

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +G  GA+AL   L  +  +  ++L    +    A+ +A++L  +  +  LDL  N L
Sbjct: 144 ENQLGVAGAQALCAALTVNQAMRKMQLSGNGLEEQAAQHLAELLLAHTDLKSLDLSYNQL 203

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAFN 570
            D+             A+     +   ++  N+L+G   +A +  +  N  L  +D+++N
Sbjct: 204 NDQAGE------TLGPALAENTGLTELNVSWNHLRGPGAVAFARGLEANIFLKVLDISYN 257

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
              D GA A+ +ALKAN    +  LN++NN ++  G
Sbjct: 258 GFGDPGASAVGEALKANN--VLEELNMSNNRISAMG 291



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 28/173 (16%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +   VD+S    G  G   L  +L  NQ   ++  + NG+     +    +L ++  LK+
Sbjct: 136 SIHDVDLSENQLGVAGAQALCAALTVNQAMRKMQLSGNGLEEQAAQHLAELLLAHTDLKS 195

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR----------------------- 259
           L+LS N + D+  + L   L +N G+  L +S   LR                       
Sbjct: 196 LDLSYNQLNDQAGETLGPALAENTGLTELNVSWNHLRGPGAVAFARGLEANIFLKVLDIS 255

Query: 260 -----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
                D GA A+ E LK N++L  L ++NN I   G  SL   L  N T+R L
Sbjct: 256 YNGFGDPGASAVGEALKANNVLEELNMSNNRISAMGALSLGLGLRVNQTLRIL 308



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 12/227 (5%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L+   LY+          I+  L+Q  +   ++L    +  +GA A+A  L  N  +  L
Sbjct: 54  LVRDTLYLRSCRAHSVVPISCFLRQG-SAQELNLRHRGLGPQGARALASSLSSNPYVKRL 112

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL  N +   GA+AL+  L    +I+ + L   Q+G +GA+ +   L  N  +  + L  
Sbjct: 113 DLRDNGLCGAGAEALAGALSKSSSIHDVDLSENQLGVAGAQALCAALTVNQAMRKMQLSG 172

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSID 566
           NGL ++       L   H+ + SL       L  N L  Q  + L  +    N  LT ++
Sbjct: 173 NGLEEQAAQHLAELLLAHTDLKSL------DLSYNQLNDQAGETLGPAL-AENTGLTELN 225

Query: 567 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +++N +R  GA A A+ L+AN  + +  L+++ N     G SA+ +A
Sbjct: 226 VSWNHLRGPGAVAFARGLEAN--IFLKVLDISYNGFGDPGASAVGEA 270


>gi|299116824|emb|CBN74936.1| Hypothetical leucine rich repeat calcium binding protein
           [Ectocarpus siliculosus]
          Length = 2023

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 9/203 (4%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA +LA  L  N  + EL L  N I   GI AL + L   + +L+ L +  N I  +G  
Sbjct: 688 GAVSLALALRQNVRVEELDLSFNRISGAGIAALAASLGDPRCRLSWLSLSQNGIGRRGGE 747

Query: 378 HVAEYI----KNCKSLLWIN-LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           H+ + +    ++     W   L  NDIG +G + + +AL QN +I  + L  N + +  A
Sbjct: 748 HLGKMLAGGSEDDGGAQWGQILDGNDIGHDGTQGLCEALLQNHSILKLSLRRNLLLADSA 807

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE--- 489
             +A++L  N  I +LDLAYNPIG +G + LS  L  + ++ TL L  C++  +G +   
Sbjct: 808 ERLAQLLLRNGAIETLDLAYNPIGPEGLRRLSGFLWKNTSLETLGLRGCEVEPTGVKSGI 867

Query: 490 -FVADMLRYNNTISILDLRANGL 511
             +A  L  N  ++ LDL AN L
Sbjct: 868 YTLAQGLCTNRALTSLDLAANEL 890



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 33/292 (11%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           TG    ESK    + A +      +++S +   D+G   LA +L  N   EE+  + N I
Sbjct: 653 TGVPLTESKIESADEADQQAPLKRINLSRQQICDDGAVSLALALRQNVRVEELDLSFNRI 712

Query: 203 TAAGIKAFDGVL-QSNIALKTLNLSGNPIGDEGVKCLCDILV----DNAGVERLQ-LSSV 256
           + AGI A    L      L  L+LS N IG  G + L  +L     D+ G +  Q L   
Sbjct: 713 SGAGIAALAASLGDPRCRLSWLSLSQNGIGRRGGEHLGKMLAGGSEDDGGAQWGQILDGN 772

Query: 257 DLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
           D+  +G + + E LL+N+SIL+ L L  N++       LA+ LL N  I +L L  N  G
Sbjct: 773 DIGHDGTQGLCEALLQNHSILK-LSLRRNLLLADSAERLAQLLLRNGAIETLDLAYNPIG 831

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G   L+  L  N SL  L L G  +   G+++                         G
Sbjct: 832 PEGLRRLSGFLWKNTSLETLGLRGCEVEPTGVKS-------------------------G 866

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            + +A+ +   ++L  ++L  N++ +   +++A +L +N+T+T IDL GNN+
Sbjct: 867 IYTLAQGLCTNRALTSLDLAANELDEYAGQELAHSLVKNKTLTDIDLTGNNV 918



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 24/180 (13%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G + G +G   L E+L  N +  ++S   N + A   +    +L  N A++TL+L+ N
Sbjct: 769 LDGNDIGHDGTQGLCEALLQNHSILKLSLRRNLLLADSAERLAQLLLRNGAIETLDLAYN 828

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           PIG EG++ L   L  N  +E L L   ++   G K                        
Sbjct: 829 PIGPEGLRRLSGFLWKNTSLETLGLRGCEVEPTGVK------------------------ 864

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG  +LA+ L  N  + SL L  N         LA  L  NK+L ++ L GN++ DE +R
Sbjct: 865 SGIYTLAQGLCTNRALTSLDLAANELDEYAGQELAHSLVKNKTLTDIDLTGNNVPDEWLR 924



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 104/248 (41%), Gaps = 38/248 (15%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDL 450
           INL    I D+GA  +A AL+QN  +  +DL  N I   G +A+A  L D    ++ L L
Sbjct: 677 INLSRQQICDDGAVSLALALRQNVRVEELDLSFNRISGAGIAALAASLGDPRCRLSWLSL 736

Query: 451 AY---------------------------------NPIGADGAKALSEVLKFHGNINTLK 477
           +                                  N IG DG + L E L  + +I  L 
Sbjct: 737 SQNGIGRRGGEHLGKMLAGGSEDDGGAQWGQILDGNDIGHDGTQGLCEALLQNHSILKLS 796

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
           L    + A  AE +A +L  N  I  LDL  N +  E     +G  + ++++ +L     
Sbjct: 797 LRRNLLLADSAERLAQLLLRNGAIETLDLAYNPIGPEGLRRLSGFLWKNTSLETLGLRGC 856

Query: 538 YSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE---DVAVTS 594
                    G   LAQ     N ALTS+DLA NE+ +     +A +L  N+   D+ +T 
Sbjct: 857 EVEPTGVKSGIYTLAQGL-CTNRALTSLDLAANELDEYAGQELAHSLVKNKTLTDIDLTG 915

Query: 595 LNLANNFL 602
            N+ + +L
Sbjct: 916 NNVPDEWL 923


>gi|392341187|ref|XP_003754274.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C14orf166B
           homolog [Rattus norvegicus]
          Length = 479

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G+K +   LV    V +L+L    +++EG  ++ E+L  N  L
Sbjct: 89  NMEESCMNLNHHGLGPMGIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENYYL 148

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N +   G   +++ L EN S++  L L+GN      A  L + L  N  +R L
Sbjct: 149 QELNVSDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSL 208

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N   D     L   L+   G L  L++  N  + +GA  +   ++   +L  +++ 
Sbjct: 209 NLSHNEFSDTAGEYLGQMLALNVG-LQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVS 267

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G++GA  + D LK N  +  +D+  N I ++GAS I++ L++N  +  L L  NP+
Sbjct: 268 MNGFGNDGALALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPV 327

Query: 456 GADGAKAL 463
             +GA +L
Sbjct: 328 SLEGAYSL 335



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 2/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G+  +A +L    T  ++    N I   GI +   +L  N  L+ LN
Sbjct: 93  SCMNLNHHGLGPMGIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELN 152

Query: 225 LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D L + N+ + +L+LS    ++E A  + + L +N  +R L L++
Sbjct: 153 VSDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSH 212

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N    +    L + L  N  ++SL+L+ N+    GA AL  GL  N +L++L +  N  G
Sbjct: 213 NEFSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFG 272

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           ++G  AL   L      L  +D+  N I+ +GA  +++ ++N + L  + L++N +  EG
Sbjct: 273 NDGALALGDTLKLNSC-LVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEG 331

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  +  A+K+N      DL  +N+
Sbjct: 332 AYSLILAIKRNPKSRMEDLDISNV 355



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 4/283 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+   GIKA    L S   +  L L  N I +EG+  L ++L +N  ++ L +S  +L 
Sbjct: 100 HGLGPMGIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLG 159

Query: 260 DEGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            EGA+ I++ L+ NNS L  L+L+ N         L +AL  N  IRSL+L+ N      
Sbjct: 160 LEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDTA 219

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              L + L  N  L+ L+L  N     G  AL +GL +    L  LD+  N     GA  
Sbjct: 220 GEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNV-TLKKLDVSMNGFGNDGALA 278

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           + + +K    L+++++  N I +EGA +I+  L+ N  +  + L  N +  +GA ++   
Sbjct: 279 LGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGAYSLILA 338

Query: 439 LKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +K N  S +  LD++   +     K L  V   H  ++ +  G
Sbjct: 339 IKRNPKSRMEDLDISNVLVSEQFVKVLDGVCAIHPQLDVVYKG 381



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 144/301 (47%), Gaps = 31/301 (10%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  GI+A+   L S+   L  L++ +NSI  +G   + E +     L  +N+
Sbjct: 95  MNLNHHGLGPMGIKAIAITLVSKTTVLK-LELEDNSIQEEGILSLMEMLHENYYLQELNV 153

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N++G EGA  I+D L++N + +  + L GN    + A  + + L  N  I SL+L++N
Sbjct: 154 SDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHN 213

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                  + L ++L  +  + +L L W      GA  + + LR N T+  LD+  NG   
Sbjct: 214 EFSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNG--- 270

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL---------QGAKCLAQSFKVVNEALTS 564
                     F +    +L   L  + C+ Y+         +GA  +++  +  NE L  
Sbjct: 271 ----------FGNDGALALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLE-NNECLQV 319

Query: 565 IDLAFNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVY 618
           + L  N +  +GA+++  A+K N     ED+ ++++ ++  F+    G  A+    D+VY
Sbjct: 320 LKLFLNPVSLEGAYSLILAIKRNPKSRMEDLDISNVLVSEQFVKVLDGVCAIHPQLDVVY 379

Query: 619 E 619
           +
Sbjct: 380 K 380



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L + + +  LEL +N I   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 106 GIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLGLEGARI 165

Query: 322 LAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  L E N SL +L L GN   +E    L   LSS   ++  L++ +N  S     ++ 
Sbjct: 166 ISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNY-RIRSLNLSHNEFSDTAGEYLG 224

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  +NL  N     GA  + + L+ N T+  +D+  N   + GA A+   LK
Sbjct: 225 QMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGALALGDTLK 284

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  +D++ N I  +GA  +S+ L+ +  +  LKL    +   GA
Sbjct: 285 LNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGA 332



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 29/207 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +SG  F +E    L ++L  N     ++ + N  +    +    +L  N+ L++LNLS N
Sbjct: 182 LSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDTAGEYLGQMLALNVGLQSLNLSWN 241

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
                G   LC+ L  N  +++L +S     ++GA A+ + LK NS L  ++++ N    
Sbjct: 242 HFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGALALGDTLKLNSCLVYVDVSRN---- 297

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G T+                        GA+ ++KGLE N+ L+ L L  N +  EG  
Sbjct: 298 -GITN-----------------------EGASRISKGLENNECLQVLKLFLNPVSLEGAY 333

Query: 349 ALMSGLS-SRKGKLAVLDIGNNSISAK 374
           +L+  +  + K ++  LDI N  +S +
Sbjct: 334 SLILAIKRNPKSRMEDLDISNVLVSEQ 360


>gi|399497994|emb|CCG20325.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++ G+ + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399497904|emb|CCG20280.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSENALGEKGVRAFGKLLQSQNNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +DL  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSENALGEKGVRAFGKLLQSQNN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +DL+ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ L  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEVL 498



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 49/295 (16%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSENALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQNNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYL----QGAKCLAQSFK--------------------------- 556
                KH     + ++YL    +GA  +A + K                           
Sbjct: 352 -----KHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASAIASC 406

Query: 557 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               + L  + L  NE++D+GA  IA+AL+ +    +  ++L++N L + G   L
Sbjct: 407 IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDLSSNALRRAGARVL 459


>gi|399498002|emb|CCG20329.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 VASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  EV S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEVASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEVASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399497972|emb|CCG20314.1| Ran GTPase activating protein 2 [Solanum kurtzianum]
          Length = 553

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+++ L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLESQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  + + L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AI   LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLESQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +  + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIVNALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|395528206|ref|XP_003766222.1| PREDICTED: leucine-rich repeat-containing protein 34 [Sarcophilus
           harrisii]
          Length = 700

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 5/311 (1%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           AG N L     +L  +  + L    K     + +D+      D G   + + L   Q   
Sbjct: 255 AGNNHLITPVQRLTDKDFEVLIYSIKPYTNITGLDVRYNLITDYGAHHVVKLLEDIQNIT 314

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            ++   N I   G +     L  N  LK L ++GN IG++G      +L  N+ +E+L L
Sbjct: 315 YLNLMFNDIETEGGEMIAKALHRNTTLKYLRMTGNKIGNKGGMFFATMLQINSSLEKLDL 374

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLAEALLENSTIRSLHLN 310
              DL  +   A+A +L  N+ ++ + LN  ++   +      +   L  NS+I  +HL 
Sbjct: 375 GDCDLEMQSLIALATVLTKNTSIKGINLNRPLLKSEEEESTVHIGNMLQINSSIIEIHLC 434

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            +     G   L KGL  N SLR L +  N I  + ++ L   L  R   L V+D+ +N 
Sbjct: 435 KHDMKNFGMEQLCKGLLLNTSLRYLDVSCNRITRDAMKYL-GELLKRNNVLEVIDLSSNR 493

Query: 371 ISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           I  +G+ ++AE +     SL  +++  N+I  EG +  +DALK N T++   + GN   S
Sbjct: 494 IEDEGSLYLAEALAFYNTSLKALSVVSNNISGEGLKAFSDALKTNTTLSNFYIWGNKFDS 553

Query: 430 KGASAIARVLK 440
           +   A + ++K
Sbjct: 554 ETCVAFSHLIK 564



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 35/266 (13%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N I+  GA HV + +++ +++ ++NL  NDI  EG E IA AL +N T+  + + 
Sbjct: 288 LDVRYNLITDYGAHHVVKLLEDIQNITYLNLMFNDIETEGGEMIAKALHRNTTLKYLRMT 347

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ NS +  LDL    +      AL+ VL  + +I  + L    +
Sbjct: 348 GNKIGNKGGMFFATMLQINSSLEKLDLGDCDLEMQSLIALATVLTKNTSIKGINLNRPLL 407

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLR----DEVCSGCNGLSFFHSAIYSLKHML 536
            +   E    + +ML+ N++I  + L  + ++    +++C G                 L
Sbjct: 408 KSEEEESTVHIGNMLQINSSIIEIHLCKHDMKNFGMEQLCKG-----------------L 450

Query: 537 FYSLCINYL---------QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
             +  + YL            K L +  K  N  L  IDL+ N I D+G+  +A+AL A 
Sbjct: 451 LLNTSLRYLDVSCNRITRDAMKYLGELLK-RNNVLEVIDLSSNRIEDEGSLYLAEAL-AF 508

Query: 588 EDVAVTSLNLANNFLTKFGQSALTDA 613
            + ++ +L++ +N ++  G  A +DA
Sbjct: 509 YNTSLKALSVVSNNISGEGLKAFSDA 534



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 132/308 (42%), Gaps = 31/308 (10%)

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           +I +  AG   L      L D+  + +   +K  + +  L++  N+I   G   + + L 
Sbjct: 249 EITIKVAGNNHLITPVQRLTDKDFEVLIYSIKPYTNITGLDVRYNLITDYGAHHVVKLLE 308

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG--IRALMSGLSSR 357
           +   I  L+L  N     G   +AK L  N +L+ L + GN IG++G    A M  ++S 
Sbjct: 309 DIQNITYLNLMFNDIETEGGEMIAKALHRNTTLKYLRMTGNKIGNKGGMFFATMLQINSS 368

Query: 358 KGKL-------------AVLDIGNNSISAKG---------------AFHVAEYIKNCKSL 389
             KL             A+  +   + S KG                 H+   ++   S+
Sbjct: 369 LEKLDLGDCDLEMQSLIALATVLTKNTSIKGINLNRPLLKSEEEESTVHIGNMLQINSSI 428

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + I+L  +D+ + G E++   L  N ++  +D+  N I       +  +LK N+V+  +D
Sbjct: 429 IEIHLCKHDMKNFGMEQLCKGLLLNTSLRYLDVSCNRITRDAMKYLGELLKRNNVLEVID 488

Query: 450 LAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           L+ N I  +G+  L+E L F+  ++  L +    I   G +  +D L+ N T+S   +  
Sbjct: 489 LSSNRIEDEGSLYLAEALAFYNTSLKALSVVSNNISGEGLKAFSDALKTNTTLSNFYIWG 548

Query: 509 NGLRDEVC 516
           N    E C
Sbjct: 549 NKFDSETC 556


>gi|354491394|ref|XP_003507840.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Cricetulus griseus]
 gi|344253089|gb|EGW09193.1| Nucleotide-binding oligomerization domain-containing protein 1
           [Cricetulus griseus]
          Length = 953

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA+
Sbjct: 719 GVQELQPCFS----RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAK 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +T + LG N I  +G   +A  +K+++ I  + +  N IG +GAKA +E
Sbjct: 775 YVAQILDECRGLTHLKLGKNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H +++ L L +  I   G + +A  L+ N T++I  L  N L DE           
Sbjct: 835 ALRDHPSLSNLSLAFNGISPEGGKSLAQALKQNTTLTIFWLTKNELNDE----------- 883

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+C A+  K VN+ L  + L  N I   G   +A+AL+
Sbjct: 884 ---------------------AAECFAEMLK-VNQTLRHLWLIQNHITVKGTAQLAEALQ 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 KNSTITEICLN 932



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 1/213 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++LS   + D G K + E L    I+  L L NN I   G   +A+ L E   +  L L 
Sbjct: 733 IRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAKYVAQILDECRGLTHLKLG 792

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N     G   +A  ++ + S+ ++ + GN IGDEG +A    L      L+ L +  N 
Sbjct: 793 KNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPS-LSNLSLAFNG 851

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS +G   +A+ +K   +L    L  N++ DE AE  A+ LK N+T+  + L  N+I  K
Sbjct: 852 ISPEGGKSLAQALKQNTTLTIFWLTKNELNDEAAECFAEMLKVNQTLRHLWLIQNHITVK 911

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           G + +A  L+ NS IT + L  N I  + AK  
Sbjct: 912 GTAQLAEALQKNSTITEICLNGNLINQEEAKVF 944



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 1/216 (0%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK LC+ L     V  L L +  + D GAK +A++L     L  L
Sbjct: 730 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAKYVAQILDECRGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   +A A+  +++I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGKNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPSLSNLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L  +   L +  +  N ++ + A   AE +K  ++L  + L  N I
Sbjct: 850 NGISPEGGKSLAQAL-KQNTTLTIFWLTKNELNDEAAECFAEMLKVNQTLRHLWLIQNHI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
             +G  ++A+AL++N TIT I L GN I+ + A   
Sbjct: 909 TVKGTAQLAEALQKNSTITEICLNGNLINQEEAKVF 944



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 84/170 (49%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A+ L   +    +    N IT  G K     ++++ ++  + + GN IGDEG 
Sbjct: 770 DIGAKYVAQILDECRGLTHLKLGKNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L D+  +  L L+   +  EG K++A+ LK N+ L +  L  N ++       A
Sbjct: 830 KAFAEALRDHPSLSNLSLAFNGISPEGGKSLAQALKQNTTLTIFWLTKNELNDEAAECFA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T+R L L  N+    G   LA+ L+ N ++ E+ L+GN I  E
Sbjct: 890 EMLKVNQTLRHLWLIQNHITVKGTAQLAEALQKNSTITEICLNGNLINQE 939



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E R  + + +       EG   +A ++  + +  +V    N I   G KAF   L+ + +
Sbjct: 782 ECRGLTHLKLGKNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L+L+ N I  EG K L   L  N  +    L+  +L DE A+  AE+LK N  LR L
Sbjct: 842 LSNLSLAFNGISPEGGKSLAQALKQNTTLTIFWLTKNELNDEAAECFAEMLKVNQTLRHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LAEAL +NSTI  + LNGN
Sbjct: 902 WLIQNHITVKGTAQLAEALQKNSTITEICLNGN 934



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 35/222 (15%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I L +N I D G + + + L + + +T + L  N I   GA  +A++L +   +T L L 
Sbjct: 733 IRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAKYVAQILDECRGLTHLKLG 792

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I  +G K ++  +K   +I  + +   QIG  GA+  A+ LR + ++S L L  NG+
Sbjct: 793 KNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPSLSNLSLAFNGI 852

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
             E                                G K LAQ+ K  N  LT   L  NE
Sbjct: 853 SPE--------------------------------GGKSLAQALKQ-NTTLTIFWLTKNE 879

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           + D+ A   A+ LK N+   +  L L  N +T  G + L +A
Sbjct: 880 LNDEAAECFAEMLKVNQ--TLRHLWLIQNHITVKGTAQLAEA 919



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 84/189 (44%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G K    +L     L  L L 
Sbjct: 733 IRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAKYVAQILDECRGLTHLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KC+   + ++  +  + +    + DEGAKA AE L+++  L  L L  N I
Sbjct: 793 KNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPSLSNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA+AL +N+T+    L  N      A   A+ L+ N++LR L L  N I  +G
Sbjct: 853 SPEGGKSLAQALKQNTTLTIFWLTKNELNDEAAECFAEMLKVNQTLRHLWLIQNHITVKG 912

Query: 347 IRALMSGLS 355
              L   L 
Sbjct: 913 TAQLAEALQ 921


>gi|426382153|ref|XP_004057684.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Gorilla gorilla gorilla]
          Length = 1040

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPAECAALAFVLQHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1000 AEALLQALERNDTILEVWLRGN 1021



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPAECAALAFVLQHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 831  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N L+DE VCS   GL        SLK +   + CI YL GA+ L Q
Sbjct: 951  LAKNVMLEELCLEENHLQDEGVCSLAEGL----KKNSSLKILKLSNNCITYL-GAEALLQ 1005

Query: 554  SFK 556
            + +
Sbjct: 1006 ALE 1008



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 997  YLGAEALLQALERNDTILEVWLRGNTF 1023



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 79/149 (53%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 873  FLALRLGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWL 932

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+DEG  ++AE LK NS L++L+L+N
Sbjct: 933  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSN 992

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL  N TI  + L GN
Sbjct: 993  NCITYLGAEALLQALERNDTILEVWLRGN 1021



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 1005

Query: 353  GLSSRKGKLAVLDIGNN 369
             L      L V   GN 
Sbjct: 1006 ALERNDTILEVWLRGNT 1022


>gi|444725628|gb|ELW66189.1| Protein NLRC5 [Tupaia chinensis]
          Length = 2655

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 137/304 (45%), Gaps = 8/304 (2%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
            EGL  LA  LG+    EE+  + N     G +A  G L     LKTL+LS  P+G+  + 
Sbjct: 1499 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTRALMGALTGKYRLKTLDLSHLPLGESTLA 1558

Query: 237  CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
             L D L     ++RL+LS   + D     ++E L+  + L  L L++N I  +G   LA 
Sbjct: 1559 TLTDELSHMTLLQRLRLSESRIDDVSCCHLSEALRAATSLEELSLSHNQIGDAGAQHLAA 1618

Query: 297  ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
             L     +R L L+ N     G   LA+ L   + L EL L  N++GD     L  GL  
Sbjct: 1619 ILPGLPELRKLDLSANGISPAGGVLLAESLTLCRHLEELILACNALGDPTALGLARGLPQ 1678

Query: 357  RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
                L VL + ++ +  +GA  + + +  C  +  I+L  N +   G  +    L   R 
Sbjct: 1679 H---LRVLHLQSSRLGPEGAQSLGQALDGCPCVEEISLAANSLAG-GVPQFCKGLPLLR- 1733

Query: 417  ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
               IDL    I ++ A  +A  L     +  + L++N +G + A  L++VL     +  L
Sbjct: 1734 --QIDLASCEIDNQTAKLLAASLALCPALEEILLSWNLLGDEAAAELAQVLPRMHQLKRL 1791

Query: 477  KLGW 480
             L W
Sbjct: 1792 DL-W 1794



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 13/266 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG +A+   L     L+ L+
Sbjct: 1487 KTFRLTSSCMSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTRALMGALTGKYRLKTLD 1546

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++  +  S   +L + L   + ++ L L+ +    +    L++ L    SL EL L  N
Sbjct: 1547 LSHLPLGESTLATLTDELSHMTLLQRLRLSESRIDDVSCCHLSEALRAATSLEELSLSHN 1606

Query: 341  SIGDEG---IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             IGD G   + A++ GL     +L  LD+  N IS  G   +AE +  C+ L  + L  N
Sbjct: 1607 QIGDAGAQHLAAILPGLP----ELRKLDLSANGISPAGGVLLAESLTLCRHLEELILACN 1662

Query: 398  DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
             +GD  A  +A  L Q+  +  + L  + +  +GA ++ + L     +  + LA N + A
Sbjct: 1663 ALGDPTALGLARGLPQH--LRVLHLQSSRLGPEGAQSLGQALDGCPCVEEISLAANSL-A 1719

Query: 458  DGAKALSEVLKFHGNINTLKLGWCQI 483
             G     + L     +  + L  C+I
Sbjct: 1720 GGVPQFCKGLPL---LRQIDLASCEI 1742



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 9/275 (3%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              ++D+S    G+  L  L + L +    + +  + + I           L++  +L+ L
Sbjct: 1542 LKTLDLSHLPLGESTLATLTDELSHMTLLQRLRLSESRIDDVSCCHLSEALRAATSLEEL 1601

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +LS N IGD G + L  IL     + +L LS+  +   G   +AE L     L  L L  
Sbjct: 1602 SLSHNQIGDAGAQHLAAILPGLPELRKLDLSANGISPAGGVLLAESLTLCRHLEELILAC 1661

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N +       LA  L ++  +R LHL  +  G  GA +L + L+G   + E+ L  NS+ 
Sbjct: 1662 NALGDPTALGLARGLPQH--LRVLHLQSSRLGPEGAQSLGQALDGCPCVEEISLAANSLA 1719

Query: 344  DEGIRALMSGLS-SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
              G+     GL   R+  LA  +I N +     A            L W     N +GDE
Sbjct: 1720 G-GVPQFCKGLPLLRQIDLASCEIDNQTAKLLAASLALCPALEEILLSW-----NLLGDE 1773

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
             A ++A  L +   +  +DL  N+I S  A  + R
Sbjct: 1774 AAAELAQVLPRMHQLKRLDLWNNSIPSDMAQCLQR 1808



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 125/313 (39%), Gaps = 34/313 (10%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMID--YSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + LR L L+  N+ D   +    L   LL 
Sbjct: 1423 ENPEAVALRLAHCDLGTHHSLLVRQLMQTCARLRRLSLSQVNLCDDDSASSLLLRSLLLS 1482

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             S +++  L  +     G   LA GL     L EL L  N   +EG RALM  L+  K +
Sbjct: 1483 LSELKTFRLTSSCMSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTRALMGALTG-KYR 1541

Query: 361  LAVLDIGN----------------------------NSISAKGAFHVAEYIKNCKSLLWI 392
            L  LD+ +                            + I      H++E ++   SL  +
Sbjct: 1542 LKTLDLSHLPLGESTLATLTDELSHMTLLQRLRLSESRIDDVSCCHLSEALRAATSLEEL 1601

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            +L  N IGD GA+ +A  L     +  +DL  N I   G   +A  L     +  L LA 
Sbjct: 1602 SLSHNQIGDAGAQHLAAILPGLPELRKLDLSANGISPAGGVLLAESLTLCRHLEELILAC 1661

Query: 453  NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            N +G   A  L+  L  H  +  L L   ++G  GA+ +   L     +  + L AN L 
Sbjct: 1662 NALGDPTALGLARGLPQH--LRVLHLQSSRLGPEGAQSLGQALDGCPCVEEISLAANSLA 1719

Query: 513  DEVCSGCNGLSFF 525
              V   C GL   
Sbjct: 1720 GGVPQFCKGLPLL 1732



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 133/339 (39%), Gaps = 44/339 (12%)

Query: 183  AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
             E+L   +  + +SF +     A  +A    L +  +L+ L LSG+ I   G+  L   L
Sbjct: 722  PEALIGCEQIDHLSFKSRKYGDAFAEALSRSLPTMGSLQKLGLSGSKITARGISHLVQAL 781

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
                 +E +      L+D+   +I E+L     LR L+L+ N I  S    LAE  ++  
Sbjct: 782  PLCPQLEEVSFQDNQLKDQEVLSIMEVLPLLPQLRKLDLSRNNISVSTLLYLAEVAVKYP 841

Query: 303  TIRSLH----------------------LNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            T+R L                       L         A+AL   L  +  L E+   GN
Sbjct: 842  TVRMLQARESDLIFLLSPPTETAEEPQRLRKCELRVHHADALTVLLHKSPHLEEVDFSGN 901

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMND 398
             + DEG R L   + SR      LD+ +N +S  G   V   +  C +L  L I+L    
Sbjct: 902  QLEDEGCRVLAEAM-SRLHIARKLDLSDNGLSTSGVHCVLSAVSACPALSELHISLMHKT 960

Query: 399  I---------GDEGAEKIADALKQNRTITT----------IDLGGNNIHSKGASAIARVL 439
            +           EG  K   A   N T             I L    + +K    +++ L
Sbjct: 961  VIFCFAQEPEEQEGTRKRLAAFLDNLTPQVPSDLPLSSRRIRLAHCGLQAKHLERLSKAL 1020

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
              +  +  LDL+ N +G +G   L+++L   G++ +L L
Sbjct: 1021 GRSCHLGHLDLSGNALGDEGVALLTQLLPELGHLQSLTL 1059



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 92/445 (20%), Positives = 163/445 (36%), Gaps = 73/445 (16%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
               VD SG    DEG   LAE++     A ++  + NG++ +G+      + +  AL  L
Sbjct: 893  LEEVDFSGNQLEDEGCRVLAEAMSRLHIARKLDLSDNGLSTSGVHCVLSAVSACPALSEL 952

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN--NSILRVLEL 281
            ++S   +    + C      +  G                K +A  L N    +   L L
Sbjct: 953  HISL--MHKTVIFCFAQEPEEQEGTR--------------KRLAAFLDNLTPQVPSDLPL 996

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            ++  I            L +  +++ HL            L+K L  +  L  L L GN+
Sbjct: 997  SSRRIR-----------LAHCGLQAKHLE----------RLSKALGRSCHLGHLDLSGNA 1035

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            +GDEG+ AL++ L    G L  L +  N++S    F +A   K   +L W+  +  DI  
Sbjct: 1036 LGDEGV-ALLTQLLPELGHLQSLTLSENAVSLDAVFSLA---KCFSTLRWV--FQLDISL 1089

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            E    +    K++       LG   +     + +   L+D      + L+   +     +
Sbjct: 1090 ESQHILLSGDKRS------SLGECQLEPPSLTHLCATLEDCPGPLEVQLSCEVLSDQSLE 1143

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNG 521
             L   L     ++ L+L    +       +AD       +  +DLR              
Sbjct: 1144 TLLHHLHRFPQLSLLQLSQTGLSRRSPFLLADTFGLCPRVRKVDLR-------------- 1189

Query: 522  LSFFHSAIYSLKHMLFYSLCINYL------QGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
             S  H+ ++   H    S+C  +       +  K L QS     + L  +DL+ N    +
Sbjct: 1190 -SLQHATLHFSSHEEQDSVCCGFTSCDLGREHVKTLCQSLSTCKD-LKQLDLSDNGFSQE 1247

Query: 576  GAFAIAQALKANEDVAVTSLNLANN 600
             A  + + L  +  V   S+NL + 
Sbjct: 1248 SALDLVETLPCHPRVREASVNLGSK 1272



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 127/336 (37%), Gaps = 52/336 (15%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            +   + +SG      G+  L ++L      EEVSF  N +    + +   VL     L+ 
Sbjct: 758  SLQKLGLSGSKITARGISHLVQALPLCPQLEEVSFQDNQLKDQEVLSIMEVLPLLPQLRK 817

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQ----------------------LSSVDLRD 260
            L+LS N I    +  L ++ V    V  LQ                      L   +LR 
Sbjct: 818  LDLSRNNISVSTLLYLAEVAVKYPTVRMLQARESDLIFLLSPPTETAEEPQRLRKCELRV 877

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
              A A+  LL  +  L  ++ + N ++  G   LAEA+      R L L+ N     G +
Sbjct: 878  HHADALTVLLHKSPHLEEVDFSGNQLEDEGCRVLAEAMSRLHIARKLDLSDNGLSTSGVH 937

Query: 321  ALAKGLEGNKSLRELH---LHGNSI--------GDEGIRALMSG--------------LS 355
             +   +    +L ELH   +H   I          EG R  ++               LS
Sbjct: 938  CVLSAVSACPALSELHISLMHKTVIFCFAQEPEEQEGTRKRLAAFLDNLTPQVPSDLPLS 997

Query: 356  SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            SR+ +LA     +  + AK    +++ +     L  ++L  N +GDEG   +   L +  
Sbjct: 998  SRRIRLA-----HCGLQAKHLERLSKALGRSCHLGHLDLSGNALGDEGVALLTQLLPELG 1052

Query: 416  TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
             + ++ L  N +      ++A+       +  LD++
Sbjct: 1053 HLQSLTLSENAVSLDAVFSLAKCFSTLRWVFQLDIS 1088



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 9/237 (3%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG   +  AL     + T+DL   
Sbjct: 1491 LTSSCMSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTRALMGALTGKYRLKTLDLSHL 1550

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             +     + +   L   +++  L L+ + I       LSE L+   ++  L L   QIG 
Sbjct: 1551 PLGESTLATLTDELSHMTLLQRLRLSESRIDDVSCCHLSEALRAATSLEELSLSHNQIGD 1610

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            +GA+ +A +L     +  LDL ANG+     S   G+     ++   +H+    L  N L
Sbjct: 1611 AGAQHLAAILPGLPELRKLDLSANGI-----SPAGGV-LLAESLTLCRHLEELILACNAL 1664

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
                 L  + + + + L  + L  + +  +GA ++ QAL       V  ++LA N L
Sbjct: 1665 GDPTALGLA-RGLPQHLRVLHLQSSRLGPEGAQSLGQALDGCP--CVEEISLAANSL 1718



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 92/247 (37%), Gaps = 11/247 (4%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L   S+   L  +N  + Y+   +L   L        +HL+  + G L      + L G 
Sbjct: 673 LAAQSLRYHLPFHNFPLTYTDLAALTNILKHREA--PIHLD--FEGCLLEPHCPEALIGC 728

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           + +  L       GD    AL   L +  G L  L +  + I+A+G  H+ + +  C  L
Sbjct: 729 EQIDHLSFKSRKYGDAFAEALSRSLPT-MGSLQKLGLSGSKITARGISHLVQALPLCPQL 787

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++   N + D+    I + L     +  +DL  NNI       +A V      +  L 
Sbjct: 788 EEVSFQDNQLKDQEVLSIMEVLPLLPQLRKLDLSRNNISVSTLLYLAEVAVKYPTVRMLQ 847

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
                  +D    LS   +       L+   C++    A+ +  +L  +  +  +D   N
Sbjct: 848 ARE----SDLIFLLSPPTETAEEPQRLRK--CELRVHHADALTVLLHKSPHLEEVDFSGN 901

Query: 510 GLRDEVC 516
            L DE C
Sbjct: 902 QLEDEGC 908


>gi|332234143|ref|XP_003266270.1| PREDICTED: LOW QUALITY PROTEIN: T-complex-associated
           testis-expressed protein 1 [Nomascus leucogenys]
          Length = 503

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 2/147 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A  + + L  +  L EL L  N IGD G R     LS    +L VL++ NN + A GA  
Sbjct: 298 ARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQS 355

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  + +  +L+ +NL +N I DEG + +A AL+ N+ +TT+ LGGN +    A+ +++V
Sbjct: 356 LAHTLAHNANLISLNLRLNCIKDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQV 415

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSE 465
           L  N+ +TS++L+ N IG DG K L E
Sbjct: 416 LAINTTLTSINLSCNHIGLDGGKQLLE 442



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 2/195 (1%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           +   L+ + + D+  + +   L+D+  +E L LS   + D GA+  A+LL ++S LRVL 
Sbjct: 284 QIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLN 342

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN +   G  SLA  L  N+ + SL+L  N     G  ALA  L+ NK L  LHL GN
Sbjct: 343 LANNQVRAPGAQSLAHTLAHNANLISLNLRLNCIKDEGGQALAHALQTNKCLTTLHLGGN 402

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +  E    L+S + +    L  +++  N I   G   + E + + K+LL  +L ++D+ 
Sbjct: 403 ELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVA 461

Query: 401 DEGAEKIADALKQNR 415
            E    I  AL  NR
Sbjct: 462 QESEYLIGQALHANR 476



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 295 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 353

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  NA +  L L    ++DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 354 QSLAHTLAHNANLISLNLRLNCIKDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 413

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 414 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 463



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 2/173 (1%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D+  R ++  L      L  LD+  N I  +GA   A+ + + + L  +NL  N +  
Sbjct: 293 VDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAAKLLSHSR-LRVLNLANNQVRA 350

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ +A  L  N  + +++L  N I  +G  A+A  L+ N  +T+L L  N +    A 
Sbjct: 351 PGAQSLAHTLAHNANLISLNLRLNCIKDEGGQALAHALQTNKCLTTLHLGGNELSEPTAT 410

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            LS+VL  +  + ++ L    IG  G + + + +  N T+   DLR + +  E
Sbjct: 411 LLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 463



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 8/169 (4%)

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A  I R L D+ V+  LDL+ N IG  GA+  +++L  H  +  L L   Q+ A GA+ +
Sbjct: 298 ARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSL 356

Query: 492 ADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL-QGAKC 550
           A  L +N  +  L+LR N ++DE      G +  H A+ + K +    L  N L +    
Sbjct: 357 AHTLAHNANLISLNLRLNCIKDE-----GGQALAH-ALQTNKCLTTLHLGGNELSEPTAT 410

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           L      +N  LTSI+L+ N I  DG   + + +  N+ +    L L++
Sbjct: 411 LLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 459


>gi|399497934|emb|CCG20295.1| Ran GTPase activating protein 2 [Solanum stenophyllidium]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A 
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAD 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG  +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  +  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITADAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  N +++ G   L +
Sbjct: 437 -GHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL--LNVNGNLISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITADAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNLISEEGVDELKEIFKKSPEML 498



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 138/342 (40%), Gaps = 61/342 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAKELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
               G N   A    +V +E ++ C +L ++NL  N +G++G       L+    +  + 
Sbjct: 190 DFVAGRNEAEALDVMNVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELF 248

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    
Sbjct: 249 LMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSST 308

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSL 540
           ++G+ G   + + L   + +  LDLR N    EV    C  LS         KH     +
Sbjct: 309 RVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEI 359

Query: 541 CINYL----QGAKCLAQSFK----------------------------VVNEALTSIDLA 568
            ++YL    +GA  +A + K                               + L  + L 
Sbjct: 360 YLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITADAASAIASCIAAKQLLAKLSLG 419

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
            NE++D+GA  IA+AL+ +  +    +N  +N L + G   L
Sbjct: 420 ENELKDEGAIQIAKALEGHSHLIEVDMN--SNALRRAGARVL 459


>gi|355566745|gb|EHH23124.1| Nucleotide-binding oligomerization domain protein 5 [Macaca
           mulatta]
          Length = 1092

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 18/328 (5%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L + L   N  ++ L L        G   ++ 
Sbjct: 664 LCSVLHTNEHLRELDLCHSNLDKSAMNILHQELRHPNCKLQKLLLKC-ITFPDGCQDIST 722

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N++L  L L G+ IGD G+++L   L   + KL  L + + +++      +   + 
Sbjct: 723 SLIHNQNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSIFNVLI 782

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +       ++  L  N 
Sbjct: 783 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAACEDLSLALISNK 842

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 843 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLT 902

Query: 503 ILDLRANGLRDEVCSGCNGLSF----FHSAIYSLKHMLFYSLCINYLQGAKCL-AQSFKV 557
            LDL +N L+D      NG+      F     +L+ +     C+  L  A CL   S  V
Sbjct: 903 HLDLGSNWLQD------NGMKLLCDVFRHPSCNLQDLELMG-CV--LTNACCLDLASVIV 953

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALK 585
            N  L S+DL  N ++DDG   +  AL+
Sbjct: 954 YNPNLRSLDLGNNNLQDDGVKILCDALR 981



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T     +   VL  + +L  LNL
Sbjct: 733  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSIFNVLIRSQSLIFLNL 792

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L +   + ++  L +N  L  L L +N
Sbjct: 793  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAACEDLSLALISNKRLTHLCLADN 852

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 853  VLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 912

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I    +L  ++L  N++ D+G
Sbjct: 913  DNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLRSLDLGNNNLQDDG 972

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 973  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNQRLIKMNLTQNTLGYEGIMK 1032

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1033 LYKVLK 1038



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 155/362 (42%), Gaps = 12/362 (3%)

Query: 155  NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
            NE  +EL      D+   N     +  L + L +     +           G +     L
Sbjct: 671  NEHLREL------DLCHSNLDKSAMNILHQELRHPNCKLQKLLLKCITFPDGCQDISTSL 724

Query: 215  QSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN 273
              N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      +I  +L  +
Sbjct: 725  IHNQNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSIFNVLIRS 784

Query: 274  SILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
              L  L L+ NN++D  G   L EAL      +  L L            L+  L  NK 
Sbjct: 785  QSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAACEDLSLALISNKR 843

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  N +GD G++ +   L   +  L  L + +   ++  + +++  + + KSL  
Sbjct: 844  LTHLCLADNVLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLTH 903

Query: 392  INLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N + D G + + D  +     +  ++L G  + +     +A V+  N  + SLDL
Sbjct: 904  LDLGSNWLQDNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLRSLDL 963

Query: 451  AYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  +  ++L  N
Sbjct: 964  GNNNLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNQRLIKMNLTQN 1023

Query: 510  GL 511
             L
Sbjct: 1024 TL 1025


>gi|332251501|ref|XP_003274884.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 45 [Nomascus leucogenys]
          Length = 671

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           RL L++  L  E  KA+ +LL   ++   L L++ M+   G T L   L  N+ +R L L
Sbjct: 34  RLDLATQSLTVETCKALGKLLPRETLCTELVLSDCMLSEEGATLLLRGLCANTVLRFLDL 93

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIG--DEGIRALMSGLSSRKGKLAVLDIG 367
            GN   A GA AL K L+ NKS++ L L  NS+G  D+       GL++  G L  LD+ 
Sbjct: 94  KGNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLGTWDDAFATFCGGLAA-NGALQQLDLR 152

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           NN IS KGA  +A  +K   +L  ++L  N++G  G   + + L  NRT+  +DL GNNI
Sbjct: 153 NNQISHKGAEELALALKGNTTLQQLDLRWNNVGLLGGRALMNCLPSNRTLWRLDLAGNNI 212



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 32/212 (15%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG-- 231
             +EG   L   L  N     +    N + AAG +A   +LQ N ++++L L  N +G  
Sbjct: 70  LSEEGATLLLRGLCANTVLRFLDLKGNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLGTW 129

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           D+     C  L  N  +++L     DLR                       NN I + G 
Sbjct: 130 DDAFATFCGGLAANGALQQL-----DLR-----------------------NNQISHKGA 161

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             LA AL  N+T++ L L  N  G LG  AL   L  N++L  L L GN+I  + +RA+ 
Sbjct: 162 EELALALKGNTTLQQLDLRWNNVGLLGGRALMNCLPSNRTLWRLDLAGNNIPGDVLRAVE 221

Query: 352 SGLSSRKGKLAVL--DIGNNSISAKGAFHVAE 381
             +   + +L     +     + +K   H+ E
Sbjct: 222 QAMGHSQDRLTTFQENQARTHVLSKEVQHLRE 253



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 3/179 (1%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +  A   +T    KA   +L        L LS   + +EG   L   L  N  +  L L 
Sbjct: 35  LDLATQSLTVETCKALGKLLPRETLCTELVLSDCMLSEEGATLLLRGLCANTVLRFLDLK 94

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY--SGFTSLAEALLENSTIRSLHLNGN 312
             +LR  GA+A+ +LL+ N  ++ L L  N +      F +    L  N  ++ L L  N
Sbjct: 95  GNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLGTWDDAFATFCGGLAANGALQQLDLRNN 154

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                GA  LA  L+GN +L++L L  N++G  G RALM+ L S +  L  LD+  N+I
Sbjct: 155 QISHKGAEELALALKGNTTLQQLDLRWNNVGLLGGRALMNCLPSNRT-LWRLDLAGNNI 212



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 55/242 (22%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSL--------LWINLYMND--IGDEGAEKIADALKQ 413
           LD+   S++          ++ CK+L        L   L ++D  + +EGA  +   L  
Sbjct: 35  LDLATQSLT----------VETCKALGKLLPRETLCTELVLSDCMLSEEGATLLLRGLCA 84

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA--DGAKALSEVLKFHG 471
           N  +  +DL GNN+ + GA A+ ++L+ N  I SL L +N +G   D        L  +G
Sbjct: 85  NTVLRFLDLKGNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLGTWDDAFATFCGGLAANG 144

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYS 531
            +  L L   QI   GAE +A  L+ N T+  LDLR N +      G  G     + + S
Sbjct: 145 ALQQLDLRNNQISHKGAEELALALKGNTTLQQLDLRWNNV------GLLGGRALMNCLPS 198

Query: 532 LKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 591
                                      N  L  +DLA N I  D   A+ QA+  ++D  
Sbjct: 199 ---------------------------NRTLWRLDLAGNNIPGDVLRAVEQAMGHSQDRL 231

Query: 592 VT 593
            T
Sbjct: 232 TT 233


>gi|410971091|ref|XP_003992007.1| PREDICTED: leucine-rich repeat-containing protein 34 [Felis catus]
          Length = 589

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 13/255 (5%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +S  GA++ A  ++    L+++NL  NDIG EG E IA AL +N T+  + + 
Sbjct: 253 LDVRYNLMSDVGAYYAARLLQKQHKLIYLNLMFNDIGPEGGELIAKALHKNTTLKYLRMT 312

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  + L    +
Sbjct: 313 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGINLNRPIL 372

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSL 540
                E    +  ML+ N+ +  L +  + +++  C    G+     A+Y  + + +  +
Sbjct: 373 YGEQEESTVHLGHMLKENHCLVALHVCKHNMKN--C----GIKQLCDALYLNRSLRYLDV 426

Query: 541 CINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
             N +   G  CLA   K  N  L  IDL+FN I D GA  +++ L A+ + ++ +L++ 
Sbjct: 427 SCNKITRDGMVCLADVLK-SNTTLEVIDLSFNRIEDVGAKYLSETL-ASHNRSLKALSVV 484

Query: 599 NNFLTKFGQSALTDA 613
           NN +   G  AL+ +
Sbjct: 485 NNNIKGEGLVALSQS 499



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 5/296 (1%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           E  + L+  L  N     +    N ++  G      +LQ    L  LNL  N IG EG +
Sbjct: 235 EDFWILSRILKKNPYINGLDVRYNLMSDVGAYYAARLLQKQHKLIYLNLMFNDIGPEGGE 294

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            +   L  N  ++ L+++   + ++G    A +L+ NS L  L+L +  +      + A 
Sbjct: 295 LIAKALHKNTTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFAT 354

Query: 297 ALLENSTIRSLHLNGN--YGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
            L +N TI+ ++LN    YG    +   L   L+ N  L  LH+  +++ + GI+ L   
Sbjct: 355 VLTQNQTIKGINLNRPILYGEQEESTVHLGHMLKENHCLVALHVCKHNMKNCGIKQLCDA 414

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-K 412
           L   +  L  LD+  N I+  G   +A+ +K+  +L  I+L  N I D GA+ +++ L  
Sbjct: 415 LYLNR-SLRYLDVSCNKITRDGMVCLADVLKSNTTLEVIDLSFNRIEDVGAKYLSETLAS 473

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            NR++  + +  NNI  +G  A+++ +K N +++++ +  N        A S++++
Sbjct: 474 HNRSLKALSVVNNNIKGEGLVALSQSMKTNPILSNVYIWGNKFDEATCVAYSDLIQ 529



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 151/352 (42%), Gaps = 11/352 (3%)

Query: 126 EGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAES 185
           EG+  ++   + L+     ++  E    L+   K+    + +D+      D G ++ A  
Sbjct: 214 EGITLNIPGNSRLMP--VERITGEDFWILSRILKKNPYINGLDVRYNLMSDVGAYYAARL 271

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L        ++   N I   G +     L  N  LK L ++GN I ++G      +L  N
Sbjct: 272 LQKQHKLIYLNLMFNDIGPEGGELIAKALHKNTTLKYLRMTGNKIENKGGMFFAAMLQIN 331

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLAEALLENS 302
           + +E+L L   DL  +   A A +L  N  ++ + LN  ++          L   L EN 
Sbjct: 332 SSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGINLNRPILYGEQEESTVHLGHMLKENH 391

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            + +LH+  +     G   L   L  N+SLR L +  N I  +G+  L   L S    L 
Sbjct: 392 CLVALHVCKHNMKNCGIKQLCDALYLNRSLRYLDVSCNKITRDGMVCLADVLKSNT-TLE 450

Query: 363 VLDIGNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           V+D+  N I   GA +++E +  + +SL  +++  N+I  EG   ++ ++K N  ++ + 
Sbjct: 451 VIDLSFNRIEDVGAKYLSETLASHNRSLKALSVVNNNIKGEGLVALSQSMKTNPILSNVY 510

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV---LKFH 470
           + GN        A + +++   +    +    P   DG   L+EV   LK H
Sbjct: 511 IWGNKFDEATCVAYSDLIQTGRLKPD-NTDVEPFVVDGHVYLAEVSNGLKKH 561


>gi|399498026|emb|CCG20341.1| Ran GTPase activating protein 2 [Solanum stenotomum]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEVAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEVAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEVAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/346 (20%), Positives = 134/346 (38%), Gaps = 59/346 (17%)

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLA 362
           +  + G  A  +  E  + L+ L   GNS           G +  R     L++ K +L 
Sbjct: 125 FDTSKGKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLK 184

Query: 363 VLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
            +D+     G N   A    ++        +L ++NL  N +G++G        +    +
Sbjct: 185 EVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNL 244

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +
Sbjct: 245 EELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFR 304

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHML 536
               ++G+ G   + + L   + +  LDLR N    EV    C  LS         KH  
Sbjct: 305 CSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHEN 355

Query: 537 FYSLCINYL----QGAKCLAQSFK----------------------------VVNEALTS 564
              + ++YL    +GA  +A + K                               + L  
Sbjct: 356 LTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEVAGNDITAEAASAIASCIAAKQLLAK 415

Query: 565 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           + L  NE++D+GA  IA+AL+ +  +    +N  +N L + G   L
Sbjct: 416 LSLGENELKDEGAIQIAKALEGHSHLIEVDMN--SNALRRAGARVL 459


>gi|224060897|ref|XP_002194083.1| PREDICTED: leucine-rich repeat-containing protein 34 [Taeniopygia
           guttata]
          Length = 385

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 117/226 (51%), Gaps = 9/226 (3%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N ++  GA  +A +++   +L ++NL  NDIG  GAE IA AL  N+++  + + 
Sbjct: 81  LDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGAELIAGALHSNQSLVHLRMT 140

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I ++G    A +LK+NS +  LDL    +  +    ++ +L+ + ++  L LG  ++
Sbjct: 141 GNKIGNQGGMFFASMLKNNSALEKLDLGDCDV-EETTVHMARMLRSNSSLVELHLGKHEM 199

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
              G E + + L  N+++  LDL  N +       C+G+ F    +   + +    L  N
Sbjct: 200 KNFGVERLCEALYENSSLRYLDLSCNNII------CDGVEFLGELLRRNRSLEILDLGAN 253

Query: 544 YLQ--GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            ++  GA CL+Q+    N  L ++ +  N I   G  A+AQA+ +N
Sbjct: 254 RIEDVGAICLSQALATRNRTLQALSVVSNNITGQGLVALAQAMHSN 299



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 1/235 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +D++     D G   +A  L  N T + ++   N I  +G +   G L SN +L  L 
Sbjct: 79  TGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGAELIAGALHSNQSLVHLR 138

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           ++GN IG++G      +L +N+ +E+L L   D+ +E    +A +L++NS L  L L  +
Sbjct: 139 MTGNKIGNQGGMFFASMLKNNSALEKLDLGDCDV-EETTVHMARMLRSNSSLVELHLGKH 197

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G   L EAL ENS++R L L+ N     G   L + L  N+SL  L L  N I D
Sbjct: 198 EMKNFGVERLCEALYENSSLRYLDLSCNNIICDGVEFLGELLRRNRSLEILDLGANRIED 257

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            G   L   L++R   L  L + +N+I+ +G   +A+ + +  +L  I ++ N I
Sbjct: 258 VGAICLSQALATRNRTLQALSVVSNNITGQGLVALAQAMHSNMALSHIYIWGNKI 312



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 8/298 (2%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+ L  LA  LG       +  A N +T AG K     LQ N  L+ LNL  N IG  G 
Sbjct: 62  DDDLGVLASVLGQAAFVTGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGA 121

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + +   L  N  +  L+++   + ++G    A +LKNNS L  L+L +  ++ +    +A
Sbjct: 122 ELIAGALHSNQSLVHLRMTGNKIGNQGGMFFASMLKNNSALEKLDLGDCDVEETT-VHMA 180

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             L  NS++  LHL  +     G   L + L  N SLR L L  N+I  +G+   +  L 
Sbjct: 181 RMLRSNSSLVELHLGKHEMKNFGVERLCEALYENSSLRYLDLSCNNIICDGVE-FLGELL 239

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQN 414
            R   L +LD+G N I   GA  +++ +    ++L  +++  N+I  +G   +A A+  N
Sbjct: 240 RRNRSLEILDLGANRIEDVGAICLSQALATRNRTLQALSVVSNNITGQGLVALAQAMHSN 299

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHG 471
             ++ I + GN I      A + ++    + +   D+A  P   DG   L+E  + HG
Sbjct: 300 MALSHIYIWGNKIDRSTCVAFSELMAVGRLELGCTDVA--PYEVDGEVLLAE--QSHG 353



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 25/238 (10%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+    +A  L Q   +T +DL  N +   GA  +A  L++NS +  L+L +N IG  
Sbjct: 60  VTDDDLGVLASVLGQAAFVTGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTS 119

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD------------- 505
           GA+ ++  L  + ++  L++   +IG  G  F A ML+ N+ +  LD             
Sbjct: 120 GAELIAGALHSNQSLVHLRMTGNKIGNQGGMFFASMLKNNSALEKLDLGDCDVEETTVHM 179

Query: 506 ---LRANGLRDEVCSGCN-----GLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSF 555
              LR+N    E+  G +     G+     A+Y    + +  L  N +   G + L +  
Sbjct: 180 ARMLRSNSSLVELHLGKHEMKNFGVERLCEALYENSSLRYLDLSCNNIICDGVEFLGELL 239

Query: 556 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +  N +L  +DL  N I D GA  ++QAL A  +  + +L++ +N +T  G  AL  A
Sbjct: 240 R-RNRSLEILDLGANRIEDVGAICLSQAL-ATRNRTLQALSVVSNNITGQGLVALAQA 295


>gi|46370420|gb|AAS89989.1| caspase activation and recruitment domain protein family member 15
            [Saguinus oedipus]
          Length = 1013

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 131/280 (46%), Gaps = 10/280 (3%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G T     AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 734  GLNVGHLKLTFCSMGPTECAALAF--VLRHLRRPVALQLDYNSVGDIGVEQLLPCL---- 787

Query: 247  GVER-LQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
            GV + L L + ++ D G  K I   L    + +++  NN + D     S+A+ L      
Sbjct: 788  GVCKALYLRNSNILDRGICKLIEHALHCEPLWKLVLFNNKLTDGCAH-SMAKLLACKQNF 846

Query: 305  RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             +L L  NY  A GA  LA+GL GN SL+ L   GN +GDEG +AL   LS  +  L  L
Sbjct: 847  LALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRMGDEGAQALAEALSDHQS-LRWL 905

Query: 365  DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
             +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  
Sbjct: 906  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSN 965

Query: 425  NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            N I   GA A+ + L+ N  I  + L  N    +    LS
Sbjct: 966  NCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKLS 1005



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 4/267 (1%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V    V  L+L+   +      A+A +L++      L+L+ N +   G   L   L    
Sbjct: 732 VRGLNVGHLKLTFCSMGPTECAALAFVLRHLRRPVALQLDYNSVGDIGVEQLLPCL---G 788

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++L+L  +     G   L +     + L +L L  N + D G    M+ L + K    
Sbjct: 789 VCKALYLRNSNILDRGICKLIEHALHCEPLWKLVLFNNKLTD-GCAHSMAKLLACKQNFL 847

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +GNN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L
Sbjct: 848 ALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRMGDEGAQALAEALSDHQSLRWLSL 907

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GNNI S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    
Sbjct: 908 VGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNC 967

Query: 483 IGASGAEFVADMLRYNNTISILDLRAN 509
           I   GAE +   L  N+TI  + LR N
Sbjct: 968 ITYLGAEALLQALERNDTILEVWLRGN 994



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 118/243 (48%), Gaps = 10/243 (4%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + N++I  +
Sbjct: 748 GPTECAALAFVLRHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRNSNILDR 803

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   + E+  +C+ L  + L+ N + D  A  +A  L   +    + LG N I + GA  
Sbjct: 804 GICKLIEHALHCEPLWKLVLFNNKLTDGCAHSMAKLLACKQNFLALRLGNNYITAAGAQV 863

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 864 LAEGLRGNTSLQFLGFWGNRMGDEGAQALAEALSDHQSLRWLSLVGNNIGSVGAQALALM 923

Query: 495 LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
           L  N  +  L L  N L+DE VCS   GL        SLK +   + CI YL GA+ L Q
Sbjct: 924 LAKNVMLEELCLEENHLQDEGVCSLAEGL----KKNSSLKILKLSNNCITYL-GAEALLQ 978

Query: 554 SFK 556
           + +
Sbjct: 979 ALE 981



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 4/180 (2%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 836  MAKLLACKQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRMGDEGAQALAEA 895

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 896  LSDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 955

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +      LS R  +L
Sbjct: 956  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEV----DKLSCRDTRL 1011



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 6/251 (2%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI-KAFDGVLQSN 217
            + LR   ++ +   + GD G+  L   LG     + +    + I   GI K  +  L   
Sbjct: 760  RHLRRPVALQLDYNSVGDIGVEQLLPCLG---VCKALYLRNSNILDRGICKLIEHALHCE 816

Query: 218  IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L  L L  N + D     +  +L        L+L +  +   GA+ +AE L+ N+ L+
Sbjct: 817  -PLWKLVLFNNKLTDGCAHSMAKLLACKQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQ 875

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L    N +   G  +LAEAL ++ ++R L L GN  G++GA ALA  L  N  L EL L
Sbjct: 876  FLGFWGNRMGDEGAQALAEALSDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCL 935

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              N + DEG+ +L  GL  +   L +L + NN I+  GA  + + ++   ++L + L  N
Sbjct: 936  EENHLQDEGVCSLAEGL-KKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 994

Query: 398  DIGDEGAEKIA 408
                E  +K++
Sbjct: 995  TFSLEEVDKLS 1005


>gi|296478341|tpg|DAA20456.1| TPA: ribonuclease inhibitor-like [Bos taurus]
          Length = 385

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 134/256 (52%), Gaps = 4/256 (1%)

Query: 161 LRAFSSVDMS--GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR  S+ ++S   R  G +G   LA +L  N   + +    NG+  AG +A  G L  + 
Sbjct: 76  LRQGSAPELSLRHRGLGPQGARALAHALNSNPCIKRLDLRDNGLCGAGAEALAGALSRSC 135

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           ++  ++LS N +G EG + +C  L  +  V+RLQL+   L ++ A+ +AELL  ++ L+ 
Sbjct: 136 SICDVDLSENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAELLLAHTGLKS 195

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N ++     +L  AL EN+ +  L+++ N+   LGA A+A+GLE N  LR L + 
Sbjct: 196 LDLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGLGAIAIARGLEANIFLRVLDIS 255

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N  GD G  A+   L +    L  L + NN ISA GA  +   ++     L I +  N 
Sbjct: 256 YNGCGDSGASAVGEALKTNN-VLEELYMSNNRISAAGALSLGLGLR-VNQTLRILVSRNP 313

Query: 399 IGDEGAEKIADALKQN 414
           +  EG   +  +++ N
Sbjct: 314 MRSEGCSGVLKSVQAN 329



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           S  EL L    +G +G RAL   L+S    +  LD+ +N +   GA  +A  +    S+ 
Sbjct: 80  SAPELSLRHRGLGPQGARALAHALNSNPC-IKRLDLRDNGLCGAGAEALAGALSRSCSIC 138

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N +G EGA+ I  AL  +  +  + L GN +  + A  +A +L  ++ + SLDL
Sbjct: 139 DVDLSENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAELLLAHTGLKSLDL 198

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           +YN +     + L   L  +  +  L + W  +   GA  +A  L  N  + +LD+  NG
Sbjct: 199 SYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGLGAIAIARGLEANIFLRVLDISYNG 258

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKV-VNEALTSIDLAF 569
             D      +G S    A+ +   +    +  N +  A  L+    + VN+ L  I ++ 
Sbjct: 259 CGD------SGASAVGEALKTNNVLEELYMSNNRISAAGALSLGLGLRVNQTLR-ILVSR 311

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
           N +R +G   + ++++AN    +  L+ ++
Sbjct: 312 NPMRSEGCSGVLKSVQANPQSVLELLDFSD 341



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 35/250 (14%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+G    L + +  +  +GA  +A  + +   +  ++L  N +   GAE +A AL ++ +
Sbjct: 77  RQGSAPELSLRHRGLGPQGARALAHALNSNPCIKRLDLRDNGLCGAGAEALAGALSRSCS 136

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I  +DL  N + ++GA AI   L  +  +  L LA N +    A+ L+E+L  H  + +L
Sbjct: 137 ICDVDLSENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAELLLAHTGLKSL 196

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L + Q+     E +   L  N  +  L++  N LR        GL              
Sbjct: 197 DLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLR--------GL-------------- 234

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                     GA  +A+  +  N  L  +D+++N   D GA A+ +ALK N    +  L 
Sbjct: 235 ----------GAIAIARGLE-ANIFLRVLDISYNGCGDSGASAVGEALKTNN--VLEELY 281

Query: 597 LANNFLTKFG 606
           ++NN ++  G
Sbjct: 282 MSNNRISAAG 291



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  ++ Q L E         S+D+S     D+    L  +L  N    E++ + N +   
Sbjct: 175 LEEQAAQCLAELLLAHTGLKSLDLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGL 234

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G  A    L++NI L+ L++S N  G                            D GA A
Sbjct: 235 GAIAIARGLEANIFLRVLDISYNGCG----------------------------DSGASA 266

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + E LK N++L  L ++NN I  +G  SL   L  N T+R L
Sbjct: 267 VGEALKTNNVLEELYMSNNRISAAGALSLGLGLRVNQTLRIL 308


>gi|308805753|ref|XP_003080188.1| unnamed protein product [Ostreococcus tauri]
 gi|116058648|emb|CAL54355.1| unnamed protein product [Ostreococcus tauri]
          Length = 533

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 142/287 (49%), Gaps = 14/287 (4%)

Query: 194 EVSFAANGITAAGIKAFDGVL-QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E+   AN + A G  A    L +   +LK LN++ N IG EGV+ L   +   + +  L 
Sbjct: 217 EIRSQANSLGADGALALSCALSREKSSLKALNVAQNLIGAEGVRALVAAIAGASNLRDLD 276

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L      D GA A A+       L  L L  N I   G  ++AEAL +        ++ +
Sbjct: 277 LQHNGCGDHGAHAFAQ--HGLGSLENLSLGFNGIGADGARAIAEALRKRHRSDDDDMDVH 334

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            GG   A   A     +K L+ L L  N++G +G  AL   L+     +  LD+ NNS+ 
Sbjct: 335 GGGDDDAVGRA-----SKMLKRLDLKCNTVGSDGAHALAESLND----VEDLDLSNNSLR 385

Query: 373 AKGAFHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
             G   +A+ +K+  S L  ++L  N++ D+ A  IADAL +N ++ T++LG N +   G
Sbjct: 386 -DGTKWIAKSLKSKASNLKQLSLQANEMTDDDAWWIADALGENNSLKTLNLGSNALGDSG 444

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           AS +A  L++N+ + +LDL  N IG DGA  L + +  +  +  L +
Sbjct: 445 ASDLASDLRENTSLETLDLTRNTIGKDGANELMDAMDENKTLTRLAI 491



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 141/342 (41%), Gaps = 56/342 (16%)

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +   GFT+L  AL      RSL         L  ++   G++  K+L E+    NS+G +
Sbjct: 178 LSVDGFTTLIGAL--KGDARSLR-------NLDVSSCGLGVDAAKALVEIRSQANSLGAD 228

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   LS  K  L  L++  N I A+G   +   I    +L  ++L  N  GD GA 
Sbjct: 229 GALALSCALSREKSSLKALNVAQNLIGAEGVRALVAAIAGASNLRDLDLQHNGCGDHGAH 288

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             A       ++  + LG N I + GA AIA  L+        D+  +  G D A     
Sbjct: 289 AFAQ--HGLGSLENLSLGFNGIGADGARAIAEALRKRHRSDDDDMDVHGGGDDDA----- 341

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
           V +    +  L L    +G+ GA  +A+ L   N +  LDL  N LRD            
Sbjct: 342 VGRASKMLKRLDLKCNTVGSDGAHALAESL---NDVEDLDLSNNSLRD------------ 386

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                G K +A+S K     L  + L  NE+ DD A+ IA AL 
Sbjct: 387 ---------------------GTKWIAKSLKSKASNLKQLSLQANEMTDDDAWWIADALG 425

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 627
            N   ++ +LNL +N L   G S L  A DL    S + +++
Sbjct: 426 ENN--SLKTLNLGSNALGDSGASDL--ASDLRENTSLETLDL 463



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 2/131 (1%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQ 215
            A+ L     +D+S  +  D G  ++A+SL    +  +++S  AN +T          L 
Sbjct: 367 LAESLNDVEDLDLSNNSLRD-GTKWIAKSLKSKASNLKQLSLQANEMTDDDAWWIADALG 425

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N +LKTLNL  N +GD G   L   L +N  +E L L+   +  +GA  + + +  N  
Sbjct: 426 ENNSLKTLNLGSNALGDSGASDLASDLRENTSLETLDLTRNTIGKDGANELMDAMDENKT 485

Query: 276 LRVLELNNNMI 286
           L  L + +N+I
Sbjct: 486 LTRLAIESNLI 496


>gi|224001524|ref|XP_002290434.1| hypothetical protein THAPSDRAFT_262646 [Thalassiosira pseudonana
           CCMP1335]
 gi|220973856|gb|EED92186.1| hypothetical protein THAPSDRAFT_262646 [Thalassiosira pseudonana
           CCMP1335]
          Length = 969

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 180/396 (45%), Gaps = 38/396 (9%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + +   N  D  L  L+ +L  N     +    N IT+ G +   G L+SN  +  
Sbjct: 538 AVERLSLRNSNVDDTELSSLSLALVDNTAVTHLWLGDNNITSEGAEYLIGTLESNNTIVY 597

Query: 223 LNLSGNP-IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVL 279
           + L GN  I D+ V  +   LVDN  +  L L++  +  +GA++  + L+ N  S++ ++
Sbjct: 598 VELEGNRGIDDDIVSSISLALVDNKSITHLNLANNAITTDGAESTLQSLEANDPSLVDLM 657

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGANALAKGLEGNKSLRELHLH 338
             + +++       + +AL  N  + SL LN   +  +L A  L+  L  N+S+  + L 
Sbjct: 658 LDDVDLVQSPEAEPILDALAANKHVTSLSLNNTCFDDSLIA-TLSLALVDNRSITHISLR 716

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDI-GN-------------------NSISAKGAFH 378
            N I  EG   LM  L S   K+  LD+ GN                   NS+    +F+
Sbjct: 717 DNKITSEGCEYLMGTLDSNT-KIIHLDLTGNPTDLAQSPDAEPLVDALAGNSVVTSLSFN 775

Query: 379 VAEY-----------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
              +           + + +S+  I+L  N+I  EG E +   L  N T+T ++L G  +
Sbjct: 776 NTGFDDSLIAALSLALVDNESITHISLKGNNITSEGCEYLMGTLDSNTTLTKVELDGKGL 835

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             +  SA+   L +N  +TSL L  N I  +GA  L E L+ + ++  + L    I ++ 
Sbjct: 836 SREDESALFEALANNKYVTSLSLRKNKIDNEGAGELCEALRRNSSLTHINLEENLITSNA 895

Query: 488 A-EFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           A +F+  +  +N+T+  L+L  N +R  + S  N +
Sbjct: 896 ALDFITCLKEHNDTVQYLELADNRVRSGLFSQMNKI 931



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 180/401 (44%), Gaps = 46/401 (11%)

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
           D   Q+  A++ L+L  + + D  +  L   LVDN  V  L L   ++  EGA+ +   L
Sbjct: 530 DDDWQAQAAVERLSLRNSNVDDTELSSLSLALVDNTAVTHLWLGDNNITSEGAEYLIGTL 589

Query: 271 KNNSILRVLELNNNM-IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           ++N+ +  +EL  N  ID    +S++ AL++N +I  L+L  N     GA +  + LE N
Sbjct: 590 ESNNTIVYVELEGNRGIDDDIVSSISLALVDNKSITHLNLANNAITTDGAESTLQSLEAN 649

Query: 330 -KSLRELHLHG-NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             SL +L L   + +       ++  L++ K  +  L + N          ++  + + +
Sbjct: 650 DPSLVDLMLDDVDLVQSPEAEPILDALAANK-HVTSLSLNNTCFDDSLIATLSLALVDNR 708

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI---HSKGASAIARVLKDNSV 444
           S+  I+L  N I  EG E +   L  N  I  +DL GN      S  A  +   L  NSV
Sbjct: 709 SITHISLRDNKITSEGCEYLMGTLDSNTKIIHLDLTGNPTDLAQSPDAEPLVDALAGNSV 768

Query: 445 ITSLDLAYNPIGADGA--KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           +TSL  ++N  G D +   ALS  L  + +I  + L    I + G E++   L  N T++
Sbjct: 769 VTSL--SFNNTGFDDSLIAALSLALVDNESITHISLKGNNITSEGCEYLMGTLDSNTTLT 826

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEAL 562
            ++L   GL  E  S                  LF +L                  N+ +
Sbjct: 827 KVELDGKGLSREDESA-----------------LFEAL----------------ANNKYV 853

Query: 563 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 603
           TS+ L  N+I ++GA  + +AL+ N   ++T +NL  N +T
Sbjct: 854 TSLSLRKNKIDNEGAGELCEALRRNS--SLTHINLEENLIT 892



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 31/241 (12%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+ ++   F D  +  L+ +L  N++   +S   N IT+ G +   G L SN  + 
Sbjct: 680 KHVTSLSLNNTCFDDSLIATLSLALVDNRSITHISLRDNKITSEGCEYLMGTLDSNTKII 739

Query: 222 TLNLSGNP-------------------------------IGDEGVKCLCDILVDNAGVER 250
            L+L+GNP                                 D  +  L   LVDN  +  
Sbjct: 740 HLDLTGNPTDLAQSPDAEPLVDALAGNSVVTSLSFNNTGFDDSLIAALSLALVDNESITH 799

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           + L   ++  EG + +   L +N+ L  +EL+   +     ++L EAL  N  + SL L 
Sbjct: 800 ISLKGNNITSEGCEYLMGTLDSNTTLTKVELDGKGLSREDESALFEALANNKYVTSLSLR 859

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N     GA  L + L  N SL  ++L  N I        ++ L      +  L++ +N 
Sbjct: 860 KNKIDNEGAGELCEALRRNSSLTHINLEENLITSNAALDFITCLKEHNDTVQYLELADNR 919

Query: 371 I 371
           +
Sbjct: 920 V 920


>gi|320165883|gb|EFW42782.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 642

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 115/245 (46%), Gaps = 31/245 (12%)

Query: 285 MIDYSGFTSLAEALLENSTIRS--LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           M+ Y   T     L +     S  L L  +  G+  A A+A+ L+ N +L +LHL  N I
Sbjct: 1   MLSYQDMTESERELYDKVKNASGELTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQI 60

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A+   L             N  ++     H    +         +L  N IG  
Sbjct: 61  GDIGAQAMAEALKV-----------NTKVTQLYRGHAERSLNEGTD----SLGTNQIGHG 105

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N T+  +DLG N I   GA A+A  LK N+ +  LDL+ N IG  GA A
Sbjct: 106 GAQAIAEALKVNTTLNDLDLGENMIGDIGAQAMAEALKVNTTLDYLDLSVNQIGDTGATA 165

Query: 463 LSEVLKFHGNINTLKLGW--C------------QIGASGAEFVADMLRYNNTISILDLRA 508
           + E LK +  +  +  G   C            QIG +GA+ +A+ ++ NNT+++L +  
Sbjct: 166 IVEALKANTTVTLIDKGHYECSLMEEMDSLHENQIGDAGAQAIAEAVKVNNTLTMLYMDQ 225

Query: 509 NGLRD 513
           N L +
Sbjct: 226 NFLTE 230



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 111/246 (45%), Gaps = 63/246 (25%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT--------------TIDLGG 424
           +AE +K   +L  ++L  N IGD GA+ +A+ALK N  +T              T  LG 
Sbjct: 40  IAEALKVNTTLTQLHLMDNQIGDIGAQAMAEALKVNTKVTQLYRGHAERSLNEGTDSLGT 99

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N I   GA AIA  LK N+ +  LDL  N IG  GA+A++E LK +  ++ L L   QIG
Sbjct: 100 NQIGHGGAQAIAEALKVNTTLNDLDLGENMIGDIGAQAMAEALKVNTTLDYLDLSVNQIG 159

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINY 544
            +GA  + + L+ N T++++D    G  +  CS    +   H                  
Sbjct: 160 DTGATAIVEALKANTTVTLID---KGHYE--CSLMEEMDSLHE----------------- 197

Query: 545 LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 604
                                    N+I D GA AIA+A+K N    +T L +  NFLT+
Sbjct: 198 -------------------------NQIGDAGAQAIAEAVKVNN--TLTMLYMDQNFLTE 230

Query: 605 FGQSAL 610
            G ++L
Sbjct: 231 AGITSL 236



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 29/242 (11%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E++  A+ + +A  +A    L+ N  L  L+L  N IGD G + + + L  N  V +L  
Sbjct: 24  ELTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQIGDIGAQAMAEALKVNTKVTQL-- 81

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
                R    +++ E   +        L  N I + G  ++AEAL  N+T+  L L  N 
Sbjct: 82  ----YRGHAERSLNEGTDS--------LGTNQIGHGGAQAIAEALKVNTTLNDLDLGENM 129

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G +GA A+A+ L+ N +L  L L  N IGD G  A++  L +    + ++D G+   S 
Sbjct: 130 IGDIGAQAMAEALKVNTTLDYLDLSVNQIGDTGATAIVEALKANT-TVTLIDKGHYECS- 187

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
                    ++   S     L+ N IGD GA+ IA+A+K N T+T + +  N +   G +
Sbjct: 188 --------LMEEMDS-----LHENQIGDAGAQAIAEAVKVNNTLTMLYMDQNFLTEAGIT 234

Query: 434 AI 435
           ++
Sbjct: 235 SL 236



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 47/187 (25%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL--- 476
           + L  + + S  A AIA  LK N+ +T L L  N IG  GA+A++E LK +  +  L   
Sbjct: 25  LTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQIGDIGAQAMAEALKVNTKVTQLYRG 84

Query: 477 -----------KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
                       LG  QIG  GA+ +A+ L+ N T++ LDL  N + D            
Sbjct: 85  HAERSLNEGTDSLGTNQIGHGGAQAIAEALKVNTTLNDLDLGENMIGD------------ 132

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                GA+ +A++ KV N  L  +DL+ N+I D GA AI +ALK
Sbjct: 133 --------------------IGAQAMAEALKV-NTTLDYLDLSVNQIGDTGATAIVEALK 171

Query: 586 ANEDVAV 592
           AN  V +
Sbjct: 172 ANTTVTL 178



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 33/234 (14%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S Q + E  +EL      A   + +     G      +AE+L  N T  ++    N I  
Sbjct: 3   SYQDMTESERELYDKVKNASGELTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQIGD 62

Query: 205 AGIKAFDGVLQSNI---------ALKTLN-----LSGNPIGDEGVKCLCDILVDNAGVER 250
            G +A    L+ N          A ++LN     L  N IG  G + + + L  N  +  
Sbjct: 63  IGAQAMAEALKVNTKVTQLYRGHAERSLNEGTDSLGTNQIGHGGAQAIAEALKVNTTLND 122

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH-- 308
           L L    + D GA+A+AE LK N+ L  L+L+ N I  +G T++ EAL  N+T+  +   
Sbjct: 123 LDLGENMIGDIGAQAMAEALKVNTTLDYLDLSVNQIGDTGATAIVEALKANTTVTLIDKG 182

Query: 309 ------------LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
                       L+ N  G  GA A+A+ ++ N +L  L++  N + + GI +L
Sbjct: 183 HYECSLMEEMDSLHENQIGDAGAQAIAEAVKVNNTLTMLYMDQNFLTEAGITSL 236



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 25/166 (15%)

Query: 145 KLFR-ESKQTLNEFAKELRAFSSVDMSGRN-FGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           +L+R  ++++LNE           D  G N  G  G   +AE+L  N T  ++    N I
Sbjct: 80  QLYRGHAERSLNE---------GTDSLGTNQIGHGGAQAIAEALKVNTTLNDLDLGENMI 130

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-------------- 248
              G +A    L+ N  L  L+LS N IGD G   + + L  N  V              
Sbjct: 131 GDIGAQAMAEALKVNTTLDYLDLSVNQIGDTGATAIVEALKANTTVTLIDKGHYECSLME 190

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           E   L    + D GA+AIAE +K N+ L +L ++ N +  +G TSL
Sbjct: 191 EMDSLHENQIGDAGAQAIAEAVKVNNTLTMLYMDQNFLTEAGITSL 236



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 21/166 (12%)

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L  + +G+  A+A++E LK +  +  L L   QIG  GA+ +A+ L+ N  ++ L  R
Sbjct: 25  LTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQIGDIGAQAMAEALKVNTKVTQL-YR 83

Query: 508 ANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
            +  R  +  G + L         + H            GA+ +A++ KV N  L  +DL
Sbjct: 84  GHAER-SLNEGTDSL-----GTNQIGH-----------GGAQAIAEALKV-NTTLNDLDL 125

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
             N I D GA A+A+ALK N    +  L+L+ N +   G +A+ +A
Sbjct: 126 GENMIGDIGAQAMAEALKVN--TTLDYLDLSVNQIGDTGATAIVEA 169


>gi|156370327|ref|XP_001628422.1| predicted protein [Nematostella vectensis]
 gi|156215398|gb|EDO36359.1| predicted protein [Nematostella vectensis]
          Length = 496

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 13/274 (4%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G +AI+  L  N+ + VL + +N I   G   +A+ L EN  I  L ++ N  GA G   
Sbjct: 114 GVQAISLALLYNTTITVLNIRDNGIGEEGGEIIAKLLRENYYITELDISENQVGARGTLE 173

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+ L+ N +L +L + GN + D+    L S L      +  +D+  N  S K   ++  
Sbjct: 174 IAETLKMNNTLTKLGMAGNDLSDKEAALLCSALLV-NSTVTRIDLSGNKFSNKACEYIGA 232

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +    SL +++L  N I  +GA++IA  L+ N  + T+ L  N + + GA A+A+ L+ 
Sbjct: 233 LLDESYSLEYLDLSWNHIQVKGAQRIAKGLEGNMKLKTLKLAWNGVATDGAIALAKSLEG 292

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV--ADMLRYNN 499
           N+ +  LDL+ N +G +GA A +  LK + ++ +L      I  +GA  +  A M    +
Sbjct: 293 NTTLVELDLSSNRVGDEGAIAFARTLKNNSSLESLYAAKNNITENGACSLLNAVMQSSGS 352

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK 533
           T+  +DL    L+D+          FHS +  LK
Sbjct: 353 TMIKIDLTGAILKDD----------FHSLVEELK 376



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 92/194 (47%), Gaps = 1/194 (0%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           A+ L  N    E+  + N + A G       L+ N  L  L ++GN + D+    LC  L
Sbjct: 147 AKLLRENYYITELDISENQVGARGTLEIAETLKMNNTLTKLGMAGNDLSDKEAALLCSAL 206

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           + N+ V R+ LS     ++  + I  LL  +  L  L+L+ N I   G   +A+ L  N 
Sbjct: 207 LVNSTVTRIDLSGNKFSNKACEYIGALLDESYSLEYLDLSWNHIQVKGAQRIAKGLEGNM 266

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            +++L L  N     GA ALAK LEGN +L EL L  N +GDEG  A    L +    L 
Sbjct: 267 KLKTLKLAWNGVATDGAIALAKSLEGNTTLVELDLSSNRVGDEGAIAFARTLKN-NSSLE 325

Query: 363 VLDIGNNSISAKGA 376
            L    N+I+  GA
Sbjct: 326 SLYAAKNNITENGA 339



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 41/314 (13%)

Query: 301 NSTIRSLHLNG-NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           + T R+L+L   N  G + A+   + +  N  +  +H HG  +G  G++A+   L     
Sbjct: 72  DPTGRTLYLRACNKLGIVPASYFVRHMT-NPEMTMMH-HG--LGPVGVQAISLALLYNT- 126

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            + VL+I +N I  +G   +A+ ++    +  +++  N +G  G  +IA+ LK N T+T 
Sbjct: 127 TITVLNIRDNGIGEEGGEIIAKLLRENYYITELDISENQVGARGTLEIAETLKMNNTLTK 186

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + + GN++  K A+ +   L  NS +T +DL+ N       + +  +L    ++  L L 
Sbjct: 187 LGMAGNDLSDKEAALLCSALLVNSTVTRIDLSGNKFSNKACEYIGALLDESYSLEYLDLS 246

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
           W  I   GA+ +A  L  N  +  L L  NG+  +                         
Sbjct: 247 WNHIQVKGAQRIAKGLEGNMKLKTLKLAWNGVATD------------------------- 281

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                  GA  LA+S +  N  L  +DL+ N + D+GA A A+ LK N   ++ SL  A 
Sbjct: 282 -------GAIALAKSLEG-NTTLVELDLSSNRVGDEGAIAFARTLKNNS--SLESLYAAK 331

Query: 600 NFLTKFGQSALTDA 613
           N +T+ G  +L +A
Sbjct: 332 NNITENGACSLLNA 345



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 7/267 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     G  G+  ++ +L YN T   ++   NGI   G +    +L+ N  +  L++S N
Sbjct: 105 MMHHGLGPVGVQAISLALLYNTTITVLNIRDNGIGEEGGEIIAKLLRENYYITELDISEN 164

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            +G  G   + + L  N  + +L ++  DL D+ A  +   L  NS +  ++L+ N    
Sbjct: 165 QVGARGTLEIAETLKMNNTLTKLGMAGNDLSDKEAALLCSALLVNSTVTRIDLSGNKFSN 224

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
                +   L E+ ++  L L+ N+    GA  +AKGLEGN  L+ L L  N +  +G  
Sbjct: 225 KACEYIGALLDESYSLEYLDLSWNHIQVKGAQRIAKGLEGNMKLKTLKLAWNGVATDGAI 284

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L      L  LD+ +N +  +GA   A  +KN  SL  +    N+I + GA  + 
Sbjct: 285 ALAKSLEGNT-TLVELDLSSNRVGDEGAIAFARTLKNNSSLESLYAAKNNITENGACSLL 343

Query: 409 DALKQN--RTITTIDLGG----NNIHS 429
           +A+ Q+   T+  IDL G    ++ HS
Sbjct: 344 NAVMQSSGSTMIKIDLTGAILKDDFHS 370



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 158 AKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           AK LR     + +D+S    G  G   +AE+L  N T  ++  A N ++          L
Sbjct: 147 AKLLRENYYITELDISENQVGARGTLEIAETLKMNNTLTKLGMAGNDLSDKEAALLCSAL 206

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
             N  +  ++LSGN   ++  + +  +L ++  +E L LS   ++ +GA+ IA+ L+ N 
Sbjct: 207 LVNSTVTRIDLSGNKFSNKACEYIGALLDESYSLEYLDLSWNHIQVKGAQRIAKGLEGNM 266

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+ L+L  N +   G  +LA++L  N+T+  L L+ N  G  GA A A+ L+ N SL  
Sbjct: 267 KLKTLKLAWNGVATDGAIALAKSLEGNTTLVELDLSSNRVGDEGAIAFARTLKNNSSLES 326

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           L+   N+I + G  +L++ +    G   +
Sbjct: 327 LYAAKNNITENGACSLLNAVMQSSGSTMI 355


>gi|399497928|emb|CCG20292.1| Ran GTPase activating protein 2 [Solanum bulbocastanum]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTDLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+ +
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N++   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNSLRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTD-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITVEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMNSNSLRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 132/341 (38%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L + K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILVALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTDLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +  +    +N  +N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSHLIEVDMN--SNSLRRAGARVL 459



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 29/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + +N N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNSLRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           +      + L+++GN I +EG+  L          LA L+
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEMLASLE 502


>gi|399497846|emb|CCG20251.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399498072|emb|CCG20364.1| Ran GTPase activating protein 2 [Solanum tuberosum]
 gi|399498074|emb|CCG20365.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +  ++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           ++ + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   E+  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKL--LNVNGNFISEEGVDELKE 489



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+++++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A S K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +   +  + L+++GN I +EG+  L
Sbjct: 463 VLHKEEFKLLNVNGNFISEEGVDEL 487


>gi|399498070|emb|CCG20363.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +  ++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +DL  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           ++ + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +DL+ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+++++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  ++L++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDLSSNALRRAGARVL 459



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L  +  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + L+ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|320170332|gb|EFW47231.1| hypothetical protein CAOG_05175 [Capsaspora owczarzaki ATCC 30864]
          Length = 1083

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 84/140 (60%)

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S  GA  +AE +K   +L  ++L  N IGD GA  IA ALK N T+T + L  N I   G
Sbjct: 13  SDAGAQAIAEALKVNTTLTQLDLPYNQIGDVGAHAIAQALKVNTTVTKLYLLRNQIGDVG 72

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A AIA  LK N+ +T ++L +N IG  GA+A++E LK +  +  L LGW ++G +GA  +
Sbjct: 73  AQAIAEALKGNTTLTHVNLFHNHIGDAGAQAIAEALKGNTKLTKLYLGWNRVGDAGALSI 132

Query: 492 ADMLRYNNTISILDLRANGL 511
           ++ L+ N T+  L+L  N +
Sbjct: 133 SEALQKNTTLRNLNLAENRI 152



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 29/193 (15%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA A+A+ L+ N +L +L L  N IGD G  A                            
Sbjct: 16  GAQAIAEALKVNTTLTQLDLPYNQIGDVGAHA---------------------------- 47

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A+ +K   ++  + L  N IGD GA+ IA+ALK N T+T ++L  N+I   GA AIA 
Sbjct: 48  -IAQALKVNTTVTKLYLLRNQIGDVGAQAIAEALKGNTTLTHVNLFHNHIGDAGAQAIAE 106

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            LK N+ +T L L +N +G  GA ++SE L+ +  +  L L   +IG      +   +  
Sbjct: 107 ALKGNTKLTKLYLGWNRVGDAGALSISEALQKNTTLRNLNLAENRIGYVEETVLRHSIHP 166

Query: 498 NNTISILDLRANG 510
              + I++ R +G
Sbjct: 167 TFQLHIVNQRRSG 179



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 76/139 (54%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L+ N  L  L+L  N IGD G   +   L  N  V +L L    + D GA+
Sbjct: 15  AGAQAIAEALKVNTTLTQLDLPYNQIGDVGAHAIAQALKVNTTVTKLYLLRNQIGDVGAQ 74

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N+ L  + L +N I  +G  ++AEAL  N+ +  L+L  N  G  GA ++++
Sbjct: 75  AIAEALKGNTTLTHVNLFHNHIGDAGAQAIAEALKGNTKLTKLYLGWNRVGDAGALSISE 134

Query: 325 GLEGNKSLRELHLHGNSIG 343
            L+ N +LR L+L  N IG
Sbjct: 135 ALQKNTTLRNLNLAENRIG 153



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 68/114 (59%)

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA+ IA+ALK N T+T +DL  N I   GA AIA+ LK N+ +T L L  N IG  G
Sbjct: 13  SDAGAQAIAEALKVNTTLTQLDLPYNQIGDVGAHAIAQALKVNTTVTKLYLLRNQIGDVG 72

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           A+A++E LK +  +  + L    IG +GA+ +A+ L+ N  ++ L L  N + D
Sbjct: 73  AQAIAEALKGNTTLTHVNLFHNHIGDAGAQAIAEALKGNTKLTKLYLGWNRVGD 126



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 77/159 (48%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           + D G   +AE+L  N T  ++    N I   G  A    L+ N  +  L L  N IGD 
Sbjct: 12  YSDAGAQAIAEALKVNTTLTQLDLPYNQIGDVGAHAIAQALKVNTTVTKLYLLRNQIGDV 71

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  + L    + D GA+AIAE LK N+ L  L L  N +  +G  S
Sbjct: 72  GAQAIAEALKGNTTLTHVNLFHNHIGDAGAQAIAEALKGNTKLTKLYLGWNRVGDAGALS 131

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           ++EAL +N+T+R+L+L  N  G +    L   +     L
Sbjct: 132 ISEALQKNTTLRNLNLAENRIGYVEETVLRHSIHPTFQL 170



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
            D G + + + L  N  + +L L    + D GA AIA+ LK N+ +  L L  N I   G
Sbjct: 13  SDAGAQAIAEALKVNTTLTQLDLPYNQIGDVGAHAIAQALKVNTTVTKLYLLRNQIGDVG 72

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             ++AEAL  N+T+  ++L  N+ G  GA A+A+ L+GN  L +L+L  N +GD G  ++
Sbjct: 73  AQAIAEALKGNTTLTHVNLFHNHIGDAGAQAIAEALKGNTKLTKLYLGWNRVGDAGALSI 132

Query: 351 MSGLSSRKGKLAVLDIGNNSI 371
              L  +   L  L++  N I
Sbjct: 133 SEAL-QKNTTLRNLNLAENRI 152



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 3/205 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +D+     GD G   +A++L  N T  ++    N I   G +A  
Sbjct: 18  QAIAEALKVNTTLTQLDLPYNQIGDVGAHAIAQALKVNTTVTKLYLLRNQIGDVGAQAIA 77

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  +NL  N IGD G + + + L  N  + +L L    + D GA +I+E L+
Sbjct: 78  EALKGNTTLTHVNLFHNHIGDAGAQAIAEALKGNTKLTKLYLGWNRVGDAGALSISEALQ 137

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR L L  N I Y   T L  ++  + T +   +N    G++    +   + G+ S
Sbjct: 138 KNTTLRNLNLAENRIGYVEETVLRHSI--HPTFQLHIVNQRRSGSVRCQEVRVVVLGDPS 195

Query: 332 LRELHLHGNSIGDEGIRALMSGLSS 356
           + +  L    I D  +R   S + S
Sbjct: 196 VGKTSL-VRGIADGYVRQAFSNMFS 219



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 35/155 (22%)

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA+A++E LK +  +  L L + QIG  GA  +A  L+ N T++ L L  N + D     
Sbjct: 16  GAQAIAEALKVNTTLTQLDLPYNQIGDVGAHAIAQALKVNTTVTKLYLLRNQIGD----- 70

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
                                       GA+ +A++ K  N  LT ++L  N I D GA 
Sbjct: 71  ---------------------------VGAQAIAEALKG-NTTLTHVNLFHNHIGDAGAQ 102

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           AIA+ALK N    +T L L  N +   G  ++++A
Sbjct: 103 AIAEALKGN--TKLTKLYLGWNRVGDAGALSISEA 135


>gi|340507176|gb|EGR33186.1| hypothetical protein IMG5_060000 [Ichthyophthirius multifiliis]
          Length = 404

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 162/321 (50%), Gaps = 9/321 (2%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
           E+ + +  +     +  D V + N     LN +   + D+ +  L ++L  +A +   + 
Sbjct: 32  ELEYPSRTLQQDSEETLDIVFRGN---DKLNFTSR-LKDKDIIILSEVLKKHASIIHHID 87

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LS   + D GA+A++ LL   + +  L L  N I+ +G   LA+ L EN +++ L+L+ N
Sbjct: 88  LSFNLITDIGAEALSSLLALCNNIESLNLQGNNIENTGGLHLADKLKENFSLKYLNLDSN 147

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN---N 369
                G+  + + L  NK+L EL+L  N I  +G+  + S L+ +   LAVL++      
Sbjct: 148 KIKTNGSMNIIEILFNNKNLIELNLADNDITHDGMIGITSVLNFQNNTLAVLNVDKPTYT 207

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           SI  + A H A+ +++ +SL  ++L  ++   E    + + L +N  +  +DL  N I  
Sbjct: 208 SIGQETAIHFAKMLQSNRSLEKLSLQKHNFTCEAIYIMTEHLLENNKLRVLDLTANKISF 267

Query: 430 KGASAIAR-VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
           KG  AIA+ +L +  V+ SL L  N  G  GAKA+++ L    ++  L + +  I  +G 
Sbjct: 268 KGCEAIAKYLLSEYCVLESLILKSNRTGHYGAKAIAQALSKTKSLVHLDMTYNDIDDNGL 327

Query: 489 EFVADMLRYNNTISILDLRAN 509
           + +A+ L  N ++  L L  N
Sbjct: 328 KMIAEALESNKSLVSLKLYFN 348



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 41/307 (13%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D+ I  L   L      +  +D+  N I+  GA  ++  +  C ++  +NL  N+I +
Sbjct: 64  LKDKDIIILSEVLKKHASIIHHIDLSFNLITDIGAEALSSLLALCNNIESLNLQGNNIEN 123

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G   +AD LK+N ++  ++L  N I + G+  I  +L +N  +  L+LA N I  DG  
Sbjct: 124 TGGLHLADKLKENFSLKYLNLDSNKIKTNGSMNIIEILFNNKNLIELNLADNDITHDGMI 183

Query: 462 ALSEVLKFHGN----INTLKLGWCQIGASGAEFVADMLR--------------------- 496
            ++ VL F  N    +N  K  +  IG   A   A ML+                     
Sbjct: 184 GITSVLNFQNNTLAVLNVDKPTYTSIGQETAIHFAKMLQSNRSLEKLSLQKHNFTCEAIY 243

Query: 497 -------YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK 549
                   NN + +LDL AN +      GC  ++ +  + Y +   L          GAK
Sbjct: 244 IMTEHLLENNKLRVLDLTANKIS---FKGCEAIAKYLLSEYCVLESLILKSNRTGHYGAK 300

Query: 550 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
            +AQ+     ++L  +D+ +N+I D+G   IA+AL++N+  ++ SL L   +   FGQ A
Sbjct: 301 AIAQALSKT-KSLVHLDMTYNDIDDNGLKMIAEALESNK--SLVSLKL---YFNHFGQMA 354

Query: 610 LTDAKDL 616
           L +   L
Sbjct: 355 LQEFHKL 361



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 147/315 (46%), Gaps = 39/315 (12%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGITA 204
           L ++S++TL+      R    ++ + R   D+ +  L+E L  +      +  + N IT 
Sbjct: 40  LQQDSEETLDIV---FRGNDKLNFTSR-LKDKDIIILSEVLKKHASIIHHIDLSFNLITD 95

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +A   +L     +++LNL GN I + G   L D L +N  ++ L L S  ++  G+ 
Sbjct: 96  IGAEALSSLLALCNNIESLNLQGNNIENTGGLHLADKLKENFSLKYLNLDSNKIKTNGSM 155

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALG---AN 320
            I E+L NN  L  L L +N I + G   +   L  +N+T+  L+++     ++G   A 
Sbjct: 156 NIIEILFNNKNLIELNLADNDITHDGMIGITSVLNFQNNTLAVLNVDKPTYTSIGQETAI 215

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
             AK L+ N+SL +L L  ++   E I  +   L     KL VLD+  N IS KG   +A
Sbjct: 216 HFAKMLQSNRSLEKLSLQKHNFTCEAIYIMTEHLL-ENNKLRVLDLTANKISFKGCEAIA 274

Query: 381 EYI-----------------------------KNCKSLLWINLYMNDIGDEGAEKIADAL 411
           +Y+                                KSL+ +++  NDI D G + IA+AL
Sbjct: 275 KYLLSEYCVLESLILKSNRTGHYGAKAIAQALSKTKSLVHLDMTYNDIDDNGLKMIAEAL 334

Query: 412 KQNRTITTIDLGGNN 426
           + N+++ ++ L  N+
Sbjct: 335 ESNKSLVSLKLYFNH 349



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 1/152 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G E     A+ L  N++ E++S   +  T   I      L  N  L+ L+L+ N I  +
Sbjct: 209 IGQETAIHFAKMLQSNRSLEKLSLQKHNFTCEAIYIMTEHLLENNKLRVLDLTANKISFK 268

Query: 234 GVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           G + +   L+    V E L L S      GAKAIA+ L     L  L++  N ID +G  
Sbjct: 269 GCEAIAKYLLSEYCVLESLILKSNRTGHYGAKAIAQALSKTKSLVHLDMTYNDIDDNGLK 328

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +AEAL  N ++ SL L  N+ G +      K
Sbjct: 329 MIAEALESNKSLVSLKLYFNHFGQMALQEFHK 360



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 89/223 (39%), Gaps = 33/223 (14%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SN 217
           KE  +   +++        G   + E L  N+   E++ A N IT  G+     VL   N
Sbjct: 134 KENFSLKYLNLDSNKIKTNGSMNIIEILFNNKNLIELNLADNDITHDGMIGITSVLNFQN 193

Query: 218 IALKTLNL---SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
             L  LN+   +   IG E       +L  N  +E+L L   +   E    + E L  N+
Sbjct: 194 NTLAVLNVDKPTYTSIGQETAIHFAKMLQSNRSLEKLSLQKHNFTCEAIYIMTEHLLENN 253

Query: 275 ILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGL------- 326
            LRVL+L  N I + G  ++A+ LL E   + SL L  N  G  GA A+A+ L       
Sbjct: 254 KLRVLDLTANKISFKGCEAIAKYLLSEYCVLESLILKSNRTGHYGAKAIAQALSKTKSLV 313

Query: 327 ---------------------EGNKSLRELHLHGNSIGDEGIR 348
                                E NKSL  L L+ N  G   ++
Sbjct: 314 HLDMTYNDIDDNGLKMIAEALESNKSLVSLKLYFNHFGQMALQ 356


>gi|290985427|ref|XP_002675427.1| predicted protein [Naegleria gruberi]
 gi|284089023|gb|EFC42683.1| predicted protein [Naegleria gruberi]
          Length = 324

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 173/364 (47%), Gaps = 82/364 (22%)

Query: 161 LRAFSSVDMSGRNFGDEGLF------FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           ++  +S+D+SG   GDE          ++ ++G N+  +E +           K    + 
Sbjct: 1   MKQLTSLDISGNGIGDEAKLISEMKQLISLNIGKNEIGDEEA-----------KLISEMK 49

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCD--------ILVDNAGVE------------RLQLS 254
           Q    L +LN+S N IGDEG K + +        I  +  GVE             L + 
Sbjct: 50  Q----LTSLNISDNLIGDEGAKLISEMKQLTSLNICCNRIGVEGAKYLSEMKQLISLNIC 105

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL----AEALLENSTIRSLHLN 310
             ++ DEGAK I+E  +  S+        N+    GFT +    A+ + E   + SL ++
Sbjct: 106 ENEIGDEGAKLISETRQLTSL--------NI----GFTQIGGEGAKFISEMKQLTSLDIS 153

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  GA  +++     K L  L++  N IGDEG +     L S   +L  L+I NN 
Sbjct: 154 DNLIGVEGAKFISE----MKQLTSLNISDNLIGDEGAK-----LISEMKQLTSLNISNNQ 204

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I  +G   ++E     K L  +++  N IGDEGA+ I++     + +T++++ GN I  +
Sbjct: 205 IGGEGVKLISEM----KQLTSLDISNNQIGDEGAKLISEM----KQLTSLNISGNRIGDE 256

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA +++ + +    + SLD++YN IG +G K +SE+ +      +L +   +IG  G ++
Sbjct: 257 GAKSMSEMKQ----LKSLDISYNQIGDEGTKLISEMKQLI----SLNIRANRIGDEGVKY 308

Query: 491 VADM 494
           + +M
Sbjct: 309 IREM 312



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 151/290 (52%), Gaps = 48/290 (16%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L  L++  N IGDEG +     L S   +L  L+I  N I  +GA +++E     K L
Sbjct: 49  KQLTSLNISDNLIGDEGAK-----LISEMKQLTSLNICCNRIGVEGAKYLSEM----KQL 99

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + +N+  N+IGDEGA+ I++     R +T++++G   I  +GA  I+ + +    +TSLD
Sbjct: 100 ISLNICENEIGDEGAKLISET----RQLTSLNIGFTQIGGEGAKFISEMKQ----LTSLD 151

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++ N IG +GAK +SE+ +      +L +    IG  GA+ +++M      ++ L++  N
Sbjct: 152 ISDNLIGVEGAKFISEMKQL----TSLNISDNLIGDEGAKLISEM----KQLTSLNISNN 203

Query: 510 GLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDL 567
            +      G  G+      I  +K +    +  N +  +GAK +++      + LTS+++
Sbjct: 204 QI------GGEGVKL----ISEMKQLTSLDISNNQIGDEGAKLISEM-----KQLTSLNI 248

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
           + N I D+GA ++++  +      + SL+++ N +   G   +++ K L+
Sbjct: 249 SGNRIGDEGAKSMSEMKQ------LKSLDISYNQIGDEGTKLISEMKQLI 292



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 12/110 (10%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E++  +S+++S    G EG+  ++E     +    +  + N I   G K    + Q    
Sbjct: 191 EMKQLTSLNISNNQIGGEGVKLISEM----KQLTSLDISNNQIGDEGAKLISEMKQ---- 242

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           L +LN+SGN IGDEG K + ++      ++ L +S   + DEG K I+E+
Sbjct: 243 LTSLNISGNRIGDEGAKSMSEM----KQLKSLDISYNQIGDEGTKLISEM 288


>gi|399498008|emb|CCG20332.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 134/274 (48%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   GI+AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L E L   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCETLGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++GIRA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGIRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCETL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCETLGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|332020154|gb|EGI60598.1| Leucine-rich repeat-containing protein [Acromyrmex echinatior]
          Length = 446

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 2/252 (0%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
            ++++ +  G  +  +KA    L  NI ++ L+L    +     + L D+L+ N  +  L
Sbjct: 98  TDQLNLSYTGFKSPIMKAICEALTDNIFVRKLDLKDTKLSANACRYLNDLLLKNNSIIDL 157

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            LS   +   GAK +   +  N+ L+VL+L+   I   GF  +A AL  N  + SL L+ 
Sbjct: 158 SLSGCRIGTNGAKKLYHAISENTALKVLDLSRCNIGNEGFEYIASALSNNQDLESLDLSD 217

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI-RALMSGLSSRKGKLAVLDIGNNS 370
           N+   + + +L   L  +KSL  L+L  NS+ D  + + L++GL   +  L  L++  N+
Sbjct: 218 NHLDEMCSKSLY-NLLSSKSLTHLNLSWNSLYDAKVWKVLVNGLKKNRESLRSLNLSWNA 276

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I  +   H+   +   +++  +NL  N    + AE IA+ + +N T+  + LG N + ++
Sbjct: 277 IGEECVHHLYNLLSRSRNIEELNLSWNRFNGKDAEIIAEGISKNNTLQELQLGNNPLEAQ 336

Query: 431 GASAIARVLKDN 442
           G SA+   +  N
Sbjct: 337 GVSALIHAITPN 348



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 127/265 (47%), Gaps = 7/265 (2%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +  AG+++  G L+  +    LNLS        +K +C+ L DN  V +L L    L   
Sbjct: 81  VKRAGLRSI-GSLKDMLLTDQLNLSYTGFKSPIMKAICEALTDNIFVRKLDLKDTKLSAN 139

Query: 262 GAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
             + + + LLKNNSI+  L L+   I  +G   L  A+ EN+ ++ L L+    G  G  
Sbjct: 140 ACRYLNDLLLKNNSIID-LSLSGCRIGTNGAKKLYHAISENTALKVLDLSRCNIGNEGFE 198

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            +A  L  N+ L  L L  N + +   ++L + LSS+   L  L++  NS+     + V 
Sbjct: 199 YIASALSNNQDLESLDLSDNHLDEMCSKSLYNLLSSK--SLTHLNLSWNSLYDAKVWKVL 256

Query: 381 E--YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
                KN +SL  +NL  N IG+E    + + L ++R I  ++L  N  + K A  IA  
Sbjct: 257 VNGLKKNRESLRSLNLSWNAIGEECVHHLYNLLSRSRNIEELNLSWNRFNGKDAEIIAEG 316

Query: 439 LKDNSVITSLDLAYNPIGADGAKAL 463
           +  N+ +  L L  NP+ A G  AL
Sbjct: 317 ISKNNTLQELQLGNNPLEAQGVSAL 341



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 12/197 (6%)

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           I +AL  N  +  +DL    + +     +  +L  N+ I  L L+   IG +GAK L   
Sbjct: 116 ICEALTDNIFVRKLDLKDTKLSANACRYLNDLLLKNNSIIDLSLSGCRIGTNGAKKLYHA 175

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           +  +  +  L L  C IG  G E++A  L  N  +  LDL  N L DE+CS     S ++
Sbjct: 176 ISENTALKVLDLSRCNIGNEGFEYIASALSNNQDLESLDLSDNHL-DEMCSK----SLYN 230

Query: 527 SAIYSLKHMLFYSLCINYLQGA---KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 583
             + S K +   +L  N L  A   K L    K   E+L S++L++N I ++    +   
Sbjct: 231 --LLSSKSLTHLNLSWNSLYDAKVWKVLVNGLKKNRESLRSLNLSWNAIGEECVHHLYNL 288

Query: 584 LKANEDVAVTSLNLANN 600
           L  + ++    LNL+ N
Sbjct: 289 LSRSRNIE--ELNLSWN 303



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 7/255 (2%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL   + + LN+   +  +   + +SG   G  G   L  ++  N   + +  +   I  
Sbjct: 135 KLSANACRYLNDLLLKNNSIIDLSLSGCRIGTNGAKKLYHAISENTALKVLDLSRCNIGN 194

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +     L +N  L++L+LS N + +   K L ++L  +  +  L LS   L D    
Sbjct: 195 EGFEYIASALSNNQDLESLDLSDNHLDEMCSKSLYNLL-SSKSLTHLNLSWNSLYDAKVW 253

Query: 265 AIAE--LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            +    L KN   LR L L+ N I       L   L  +  I  L+L+ N      A  +
Sbjct: 254 KVLVNGLKKNRESLRSLNLSWNAIGEECVHHLYNLLSRSRNIEELNLSWNRFNGKDAEII 313

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS---SRKGKLAVLDIGNNSISAKGAFHV 379
           A+G+  N +L+EL L  N +  +G+ AL+  ++   S    L +LD+  N  + K     
Sbjct: 314 AEGISKNNTLQELQLGNNPLEAQGVSALIHAITPNISPDSALRLLDL-ENIWANKNILED 372

Query: 380 AEYIKNCKSLLWINL 394
            E IKN +  + I L
Sbjct: 373 LETIKNVRPWVTIKL 387



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 18/197 (9%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           +LK       ++L      S    AI   L DN  +  LDL    + A+  + L+++L  
Sbjct: 91  SLKDMLLTDQLNLSYTGFKSPIMKAICEALTDNIFVRKLDLKDTKLSANACRYLNDLLLK 150

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCN----GLSFF 525
           + +I  L L  C+IG +GA+ +   +  N  + +LDL          S CN    G  + 
Sbjct: 151 NNSIIDLSLSGCRIGTNGAKKLYHAISENTALKVLDL----------SRCNIGNEGFEYI 200

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVV-NEALTSIDLAFNEIRDDGAFAI-AQA 583
            SA+ + + +    L  N+L    C    + ++ +++LT ++L++N + D   + +    
Sbjct: 201 ASALSNNQDLESLDLSDNHLDEM-CSKSLYNLLSSKSLTHLNLSWNSLYDAKVWKVLVNG 259

Query: 584 LKANEDVAVTSLNLANN 600
           LK N + ++ SLNL+ N
Sbjct: 260 LKKNRE-SLRSLNLSWN 275



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 14/247 (5%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+ +  +SA    ++ + +    S++ ++L    IG  GA+K+  A+ +N  +  +DL 
Sbjct: 129 LDLKDTKLSANACRYLNDLLLKNNSIIDLSLSGCRIGTNGAKKLYHAISENTALKVLDLS 188

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
             NI ++G   IA  L +N  + SLDL+ N +    +K+L  +L    ++  L L W  +
Sbjct: 189 RCNIGNEGFEYIASALSNNQDLESLDLSDNHLDEMCSKSLYNLLS-SKSLTHLNLSWNSL 247

Query: 484 -GASGAEFVADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLC 541
             A   + + + L+ N  ++  L+L  N + +E       +   ++ +   +++   +L 
Sbjct: 248 YDAKVWKVLVNGLKKNRESLRSLNLSWNAIGEEC------VHHLYNLLSRSRNIEELNLS 301

Query: 542 INYLQG--AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN--EDVAVTSLNL 597
            N   G  A+ +A+     N  L  + L  N +   G  A+  A+  N   D A+  L+L
Sbjct: 302 WNRFNGKDAEIIAEGIS-KNNTLQELQLGNNPLEAQGVSALIHAITPNISPDSALRLLDL 360

Query: 598 ANNFLTK 604
            N +  K
Sbjct: 361 ENIWANK 367


>gi|426243225|ref|XP_004015460.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Ovis
            aries]
          Length = 1054

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 15/307 (4%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDIL------VDNAGVERLQLSSVDLRDEGAKAIA 267
            L +N +L  L L  N +G +GVK LC  L      + N  ++R Q+SS   +D     IA
Sbjct: 703  LSTNPSLVELALHSNALGSQGVKLLCQGLRHPNCRLQNLRLKRCQVSSSVCQDLTTALIA 762

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
                NN +LR ++L+ N +   G   L + L      ++ + L      A     LA  L
Sbjct: 763  ----NNHLLR-MDLSGNALGLLGVQLLCQGLRHPKCRLQVVQLRKCQLEAEACQELASVL 817

Query: 327  EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
              +  L EL L GN++ D G+R L  GL     +L +L +    ++      +A  ++  
Sbjct: 818  SASCHLLELDLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICLLTGAACEDLASTLRVN 877

Query: 387  KSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            +SL+ ++L +ND+GD G   + + L+  +  + T+ LG   + S     ++ VL  +S +
Sbjct: 878  QSLVELDLSLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLGVSSHL 937

Query: 446  TSLDLAYNPIGADGAKALSEVLKFHGNINTLK-LGWCQIGASGAEFVADMLRYNNTISIL 504
              LDL++N +G  G   L E L+ H      K L  C +     E ++  L  N T++ L
Sbjct: 938  WELDLSFNDLGDRGMSLLCEGLR-HPTCRLRKLLDSCSLTGKACEDISSALGVNQTLTDL 996

Query: 505  DLRANGL 511
             L  N L
Sbjct: 997  YLTNNAL 1003



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 3/301 (0%)

Query: 174  FGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G +G+  L + L + N   + +      ++++  +     L +N  L  ++LSGN +G 
Sbjct: 719  LGSQGVKLLCQGLRHPNCRLQNLRLKRCQVSSSVCQDLTTALIANNHLLRMDLSGNALGL 778

Query: 233  EGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             GV+ LC  L      ++ +QL    L  E  + +A +L  +  L  L+L  N ++ SG 
Sbjct: 779  LGVQLLCQGLRHPKCRLQVVQLRKCQLEAEACQELASVLSASCHLLELDLTGNALEDSGL 838

Query: 292  TSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +R L L            LA  L  N+SL EL L  N +GD G+  L
Sbjct: 839  RLLCQGLRHPVCRLRILWLKICLLTGAACEDLASTLRVNQSLVELDLSLNDLGDPGVLLL 898

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GL   + KL  L +G   +S+     ++  +     L  ++L  ND+GD G   + + 
Sbjct: 899  CEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLGVSSHLWELDLSFNDLGDRGMSLLCEG 958

Query: 411  LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
            L+         L   ++  K    I+  L  N  +T L L  N +G  G + L E L   
Sbjct: 959  LRHPTCRLRKLLDSCSLTGKACEDISSALGVNQTLTDLYLTNNALGNTGVRLLCERLSHP 1018

Query: 471  G 471
            G
Sbjct: 1019 G 1019



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 14/273 (5%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  N SL EL LH N++G +G++ L  GL     +L  L +    +S+     
Sbjct: 696 SEQLAAALSTNPSLVELALHSNALGSQGVKLLCQGLRHPNCRLQNLRLKRCQVSSSVCQD 755

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +   +     LL ++L  N +G  G + +   L+  +  +  + L    + ++    +A 
Sbjct: 756 LTTALIANNHLLRMDLSGNALGLLGVQLLCQGLRHPKCRLQVVQLRKCQLEAEACQELAS 815

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADM 494
           VL  +  +  LDL  N +   G + L + L+    +  L++ W   C +  +  E +A  
Sbjct: 816 VLSASCHLLELDLTGNALEDSGLRLLCQGLRH--PVCRLRILWLKICLLTGAACEDLAST 873

Query: 495 LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
           LR N ++  LDL  N L D  V   C GL      + +L+      L I  L  A C   
Sbjct: 874 LRVNQSLVELDLSLNDLGDPGVLLLCEGLRHPQCKLQTLR------LGICRLSSAACEGL 927

Query: 554 SFKV-VNEALTSIDLAFNEIRDDGAFAIAQALK 585
           S  + V+  L  +DL+FN++ D G   + + L+
Sbjct: 928 SAVLGVSSHLWELDLSFNDLGDRGMSLLCEGLR 960



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 1/138 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            ++   +D+S  + GD G+  L E L + Q   + +      +++A  +    VL  +  L
Sbjct: 878  QSLVELDLSLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLGVSSHL 937

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
              L+LS N +GD G+  LC+ L       R  L S  L  +  + I+  L  N  L  L 
Sbjct: 938  WELDLSFNDLGDRGMSLLCEGLRHPTCRLRKLLDSCSLTGKACEDISSALGVNQTLTDLY 997

Query: 281  LNNNMIDYSGFTSLAEAL 298
            L NN +  +G   L E L
Sbjct: 998  LTNNALGNTGVRLLCERL 1015


>gi|189501941|ref|YP_001957658.1| hypothetical protein Aasi_0526 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497382|gb|ACE05929.1| hypothetical protein Aasi_0526 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 372

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 126/234 (53%), Gaps = 9/234 (3%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +  + L +N I   G    A AL + + + +++L  N  GA GA A AK L+G   +  +
Sbjct: 100 VHTINLRDNQIGAHGAVEFAHAL-QGTHVHTVNLGINEIGARGAIAFAKHLQGT-CVHTV 157

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           HL  N IGD+G+      L      +  + +G N I A+G     ++++  + +  ++L 
Sbjct: 158 HLIYNQIGDQGVEGFAKHLQGTC--VHTVYLGENEIGAQGIEAFTKHLQGTQ-VHTVDLD 214

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N+IG +GAE  A  L Q   +  I+L GN I ++GA A+A+ L+   V T +DL++N I
Sbjct: 215 TNEIGIQGAEGFARLL-QGTNVQKINLSGNQIGAQGAEALAKQLQGTRVHT-VDLSWNRI 272

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           G  GA+AL++ L+    ++T+ L W QIG  GA   A  L+     ++ +LR+N
Sbjct: 273 GDQGAEALAKHLQG-TRVHTVNLSWNQIGGQGAIEFAKHLQGAQAHTV-NLRSN 324



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 15/273 (5%)

Query: 248 VERLQLSSVDLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           +++  + +++LRD      GA   A  L+   +   + L  N I   G  + A+ L + +
Sbjct: 95  LQKASVHTINLRDNQIGAHGAVEFAHALQGTHV-HTVNLGINEIGARGAIAFAKHL-QGT 152

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            + ++HL  N  G  G    AK L+G   +  ++L  N IG +GI A    L   +  + 
Sbjct: 153 CVHTVHLIYNQIGDQGVEGFAKHLQGT-CVHTVYLGENEIGAQGIEAFTKHLQGTQ--VH 209

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            +D+  N I  +GA   A  ++   ++  INL  N IG +GAE +A  L+  R + T+DL
Sbjct: 210 TVDLDTNEIGIQGAEGFARLLQGT-NVQKINLSGNQIGAQGAEALAKQLQGTR-VHTVDL 267

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I  +GA A+A+ L+   V T ++L++N IG  GA   ++ L+     +T+ L   Q
Sbjct: 268 SWNRIGDQGAEALAKHLQGTRVHT-VNLSWNQIGGQGAIEFAKHLQG-AQAHTVNLRSNQ 325

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
           IGA GAE  A +L+  N +  ++L  N +  +V
Sbjct: 326 IGAQGAEGFARLLQGTN-VHTVELSENQIGPDV 357



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 10/265 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  ++++     G  G    A +L        V+   N I A G  AF   LQ    + T
Sbjct: 99  SVHTINLRDNQIGAHGAVEFAHAL-QGTHVHTVNLGINEIGARGAIAFAKHLQGT-CVHT 156

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           ++L  N IGD+GV+     L     V  + L   ++  +G +A  + L+   +   ++L+
Sbjct: 157 VHLIYNQIGDQGVEGFAKHL-QGTCVHTVYLGENEIGAQGIEAFTKHLQGTQV-HTVDLD 214

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G    A  LL+ + ++ ++L+GN  GA GA ALAK L+G + +  + L  N I
Sbjct: 215 TNEIGIQGAEGFAR-LLQGTNVQKINLSGNQIGAQGAEALAKQLQGTR-VHTVDLSWNRI 272

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD+G  AL   L     ++  +++  N I  +GA   A++++  ++   +NL  N IG +
Sbjct: 273 GDQGAEALAKHLQGT--RVHTVNLSWNQIGGQGAIEFAKHLQGAQAHT-VNLRSNQIGAQ 329

Query: 403 GAEKIADALKQNRTITTIDLGGNNI 427
           GAE  A  L Q   + T++L  N I
Sbjct: 330 GAEGFARLL-QGTNVHTVELSENQI 353



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 22/228 (9%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           INL  N IG  GA + A AL Q   + T++LG N I ++GA A A+ L+   V T + L 
Sbjct: 103 INLRDNQIGAHGAVEFAHAL-QGTHVHTVNLGINEIGARGAIAFAKHLQGTCVHT-VHLI 160

Query: 452 YNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           YN IG  G +  ++ L+  G  ++T+ LG  +IGA G E     L+    +  +DL  N 
Sbjct: 161 YNQIGDQGVEGFAKHLQ--GTCVHTVYLGENEIGAQGIEAFTKHLQ-GTQVHTVDLDTNE 217

Query: 511 LRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLA 568
           +      G  G   F + +    ++   +L  N +  QGA+ LA+  +     + ++DL+
Sbjct: 218 I------GIQGAEGF-ARLLQGTNVQKINLSGNQIGAQGAEALAKQLQ--GTRVHTVDLS 268

Query: 569 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
           +N I D GA A+A+ L+      V ++NL+ N +   GQ A+  AK L
Sbjct: 269 WNRIGDQGAEALAKHLQGTR---VHTVNLSWNQIG--GQGAIEFAKHL 311


>gi|71423289|ref|XP_812408.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70877185|gb|EAN90557.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 449

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 157/302 (51%), Gaps = 4/302 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   D+  EG  A+A ++  ++ 
Sbjct: 60  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNDIGKEGCDALANVVNVSTK 118

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 119 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSL 178

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A+ +K  + L  + L 
Sbjct: 179 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVGLIADAVKGNRCLKDLTLG 238

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +A+ L++N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 239 NNNATDAAAEALAEMLRENSTLETLDLRSNTLTATGVRILARDGLANNVFLVSLSLSANP 298

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 299 IGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 358

Query: 513 DE 514
           +E
Sbjct: 359 NE 360



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 150/309 (48%), Gaps = 3/309 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG 
Sbjct: 100 DIGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGH 159

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGF 291
           EG   L   L  N  ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G 
Sbjct: 160 EGAALLFRALEKNVYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGV 219

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +A+A+  N  ++ L L  N      A ALA+ L  N +L  L L  N++   G+R L 
Sbjct: 220 GLIADAVKGNRCLKDLTLGNNNATDAAAEALAEMLRENSTLETLDLRSNTLTATGVRILA 279

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIAD 409
               +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA 
Sbjct: 280 RDGLANNVFLVSLSLSANPIGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIAS 339

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            +    T+  ++L GN + ++ A  ++R + ++  I+ +DL+ N IG  GA  L +  + 
Sbjct: 340 LIAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQL 399

Query: 470 HGNINTLKL 478
           +  I++L L
Sbjct: 400 NARISSLLL 408



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 167/349 (47%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 67  VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNDIGKEGCDALANVVNVSTKLQLLDIR 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N  L+ L+L+ N I
Sbjct: 126 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSLDLSLNEI 185

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GN+ L++L L GN+   +
Sbjct: 186 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVGLIADAVKGNRCLKDLTL-GNNNATD 244

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 245 AAAEALAEMLRENSTLETLDLRSNTLTATGVRILARDGLANNVFLVSLSLSANPIGSVGA 304

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +T +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 305 DEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 364

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS  +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 365 LSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNNI 413



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 14/199 (7%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSV---ITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I++    I  +    I R + D      +  +DL  N +G +  + ++ +L+    +  +
Sbjct: 36  IEMAWTRITPELCEGICRTIVDRDADVPVRVVDLIDNQLGPEQTQKIASMLE-SSTVRDV 94

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L +  IG  G + +A+++  +  + +LD+R NGL     + C  +     +I     + 
Sbjct: 95  LLRYNDIGKEGCDALANVVNVSTKLQLLDIRGNGL----TAAC--VRKLLKSISMSTALT 148

Query: 537 FYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 594
              L  N +  +GA  L ++ +  N  L S+DL+ NEI   GA +IA  L A     + +
Sbjct: 149 RLGLSANKIGHEGAALLFRALEK-NVYLKSLDLSLNEIGPSGAESIAHLL-ALPASPLKT 206

Query: 595 LNLANNFLTKFGQSALTDA 613
           L L  N L   G   + DA
Sbjct: 207 LQLYGNHLGVAGVGLIADA 225


>gi|410928299|ref|XP_003977538.1| PREDICTED: ribonuclease inhibitor-like [Takifugu rubripes]
          Length = 444

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 162/339 (47%), Gaps = 30/339 (8%)

Query: 202 ITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLR 259
           ++     +    L+SN + L+ L+LS N + D  V  LCD L++    +E L+L+   L 
Sbjct: 43  LSEVSCDSLASALRSNPSNLRVLDLSENELQDSAVTLLCDFLLNPLCKLETLRLNGCWLS 102

Query: 260 DEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGAL 317
           +    ++A  L++N   LR L+L++N +  S  T L+  LL +   + +L L G +   +
Sbjct: 103 EISCDSLASALRSNPAHLRELDLSDNKLQDSAVTLLSNYLLNHLCELETLRLKGCWLSEI 162

Query: 318 GANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL--------DIGN 368
               LA  L  N S LREL L  NS+ D G++ L SGL S   +L  L        +I  
Sbjct: 163 SCEDLASALRSNPSHLRELDLSYNSLPDSGVKVLCSGLESPNCELETLRLRFCRLSEINC 222

Query: 369 NS-ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNN 426
            S +SA G+ H   +++       ++L  N + D G   +   LK Q   + T+ L G  
Sbjct: 223 ESLVSALGSNH--SHLRE------LDLSQNHLLDSGVMLLCFGLKTQTYKLETLRLNGCR 274

Query: 427 IHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIG 484
           +      ++A  L+ D S +  LDL+ N +   G   +   L+  +  + TL+L  C + 
Sbjct: 275 VSQISCGSLASALRSDPSPLRELDLSENELQDSGVMLICSGLESPNCELETLRLNGCWLS 334

Query: 485 ASGAEFVADMLRYN-NTISILDLRANGLRDE----VCSG 518
               +++A  LR + + +  LDL  N L+D     +CSG
Sbjct: 335 HISCKYLASALRSDPSPLRELDLSQNELQDSGVKVLCSG 373



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 173/397 (43%), Gaps = 30/397 (7%)

Query: 239 CDILVDNAG-VERLQLSSVDLRDE---------GAKAIAELLKNN-SILRVLELNNNMID 287
           CD L  N   V  L LS  +L+D             ++A  L++N S LRVL+L+ N + 
Sbjct: 14  CDSLRSNPSRVRVLDLSHSELQDSVHVCWLSEVSCDSLASALRSNPSNLRVLDLSENELQ 73

Query: 288 YSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDE 345
            S  T L + LL     + +L LNG +   +  ++LA  L  N + LREL L  N + D 
Sbjct: 74  DSAVTLLCDFLLNPLCKLETLRLNGCWLSEISCDSLASALRSNPAHLRELDLSDNKLQDS 133

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGA 404
            +  L + L +   +L  L +    +S      +A  ++ N   L  ++L  N + D G 
Sbjct: 134 AVTLLSNYLLNHLCELETLRLKGCWLSEISCEDLASALRSNPSHLRELDLSYNSLPDSGV 193

Query: 405 EKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKA 462
           + +   L+  N  + T+ L    +      ++   L  N S +  LDL+ N +   G   
Sbjct: 194 KVLCSGLESPNCELETLRLRFCRLSEINCESLVSALGSNHSHLRELDLSQNHLLDSGVML 253

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYN-NTISILDLRANGLRDE----VC 516
           L   LK     + TL+L  C++       +A  LR + + +  LDL  N L+D     +C
Sbjct: 254 LCFGLKTQTYKLETLRLNGCRVSQISCGSLASALRSDPSPLRELDLSENELQDSGVMLIC 313

Query: 517 SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 576
           SG        S    L+ +      ++++   K LA + +     L  +DL+ NE++D G
Sbjct: 314 SG------LESPNCELETLRLNGCWLSHI-SCKYLASALRSDPSPLRELDLSQNELQDSG 366

Query: 577 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              +   L++     + +L L   +L++    +L  A
Sbjct: 367 VKVLCSGLES-PSCDLETLRLRCCWLSEISCDSLASA 402



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK--AFDGVLQSNIA-LKTL 223
           +D+S  +  D G+  L   L   QT +  +   NG   + I   +    L+S+ + L+ L
Sbjct: 239 LDLSQNHLLDSGVMLLCFGLK-TQTYKLETLRLNGCRVSQISCGSLASALRSDPSPLREL 297

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLEL 281
           +LS N + D GV  +C  L   N  +E L+L+   L     K +A  L+++ S LR L+L
Sbjct: 298 DLSENELQDSGVMLICSGLESPNCELETLRLNGCWLSHISCKYLASALRSDPSPLRELDL 357

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHG 339
           + N +  SG   L   L   S  + +L L   +   +  ++LA  L  N S LREL L+ 
Sbjct: 358 SQNELQDSGVKVLCSGLESPSCDLETLRLRCCWLSEISCDSLASALRSNPSHLRELDLNE 417

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDI 366
           NS+GD G + L   + S   +L +L +
Sbjct: 418 NSLGDSGEKRLFDLVESPNFELEILKL 444



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 39/275 (14%)

Query: 150 SKQTLNEFAKELRAFSS----VDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITA 204
           S+ +  + A  LR+  S    +D+S  +  D G+  L   L   N   E +      ++ 
Sbjct: 160 SEISCEDLASALRSNPSHLRELDLSYNSLPDSGVKVLCSGLESPNCELETLRLRFCRLSE 219

Query: 205 AGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEG 262
              ++    L SN + L+ L+LS N + D GV  LC  +      +E L+L+   +    
Sbjct: 220 INCESLVSALGSNHSHLRELDLSQNHLLDSGVMLLCFGLKTQTYKLETLRLNGCRVSQIS 279

Query: 263 AKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGAN 320
             ++A  L+++ S LR L+L+ N +  SG   +   L   N  + +L LNG +   +   
Sbjct: 280 CGSLASALRSDPSPLRELDLSENELQDSGVMLICSGLESPNCELETLRLNGCWLSHISCK 339

Query: 321 ALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL--------------- 364
            LA  L  + S LREL L  N + D G++ L SGL S    L  L               
Sbjct: 340 YLASALRSDPSPLRELDLSQNELQDSGVKVLCSGLESPSCDLETLRLRCCWLSEISCDSL 399

Query: 365 --------------DIGNNSISAKGAFHVAEYIKN 385
                         D+  NS+   G   + + +++
Sbjct: 400 ASALRSNPSHLRELDLNENSLGDSGEKRLFDLVES 434


>gi|300693080|ref|YP_003749053.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299075117|emb|CBJ34399.1| leucine-rich-repeat type III effector protein (GALA3) [Ralstonia
           solanacearum PSI07]
          Length = 492

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 166/348 (47%), Gaps = 46/348 (13%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +S+DM G   GDEG  +LA     N     +    N I  AG+ A    L  N  L +L
Sbjct: 146 LTSLDMHGNRIGDEGAKYLAA----NTRLTVLDVGDNMIGDAGVIA----LARNTTLTSL 197

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N  G +G++ L     DN  +  L ++   +R EG    AE+L  N+ L  L++  
Sbjct: 198 HLDRNKFGLDGIRALA----DNTTLTTLNVNKNSIRPEG----AEVLATNTTLTTLDIEG 249

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G    A+ L  + T+ +L++  N  G  G  ALA     NK+L  L +  N IG
Sbjct: 250 NAIGDQG----AQRLAASKTLTALNVRENEIGRAGGFALAV----NKTLVSLAVGYNGIG 301

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            E + A+ +       +L  LD+    IS   A   A    +  SL+ +N+  N  GDEG
Sbjct: 302 SEAVIAMAA-----NKRLISLDVEYTGISTAVAEVAAALAAST-SLVCLNVGANGFGDEG 355

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A ++A     ++TITT+++  N I   GA A+A     + +ITSLDLA N IG  G KAL
Sbjct: 356 ARRLA----ASKTITTLNVSYNRIGRDGALALAA----SKMITSLDLAGNIIGTAGIKAL 407

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +    +  + TL L   QI   G E +A     N T++ LD+  N L
Sbjct: 408 VD----NTTLATLNLSKSQIAHEGVEALA----TNTTLASLDVSCNNL 447



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 156/334 (46%), Gaps = 60/334 (17%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           LLE   +R L++NG   GA GA  LA     + +L  L +HGN IGDEG + L +     
Sbjct: 117 LLELPLVR-LNINGCRLGAKGAQRLAN----HPTLTSLDMHGNRIGDEGAKYLAA----- 166

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             +L VLD+G+N I   G   +A       +L  ++L  N  G +G   +AD    N T+
Sbjct: 167 NTRLTVLDVGDNMIGDAGVIALARN----TTLTSLHLDRNKFGLDGIRALAD----NTTL 218

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           TT+++  N+I  +G    A VL  N+ +T+LD+  N IG  GA+ L+        +  L 
Sbjct: 219 TTLNVNKNSIRPEG----AEVLATNTTLTTLDIEGNAIGDQGAQRLAA----SKTLTALN 270

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGC-------------NGLSF 524
           +   +IG +G   +A     N T+  L +  NG+  E                   G+S 
Sbjct: 271 VRENEIGRAGGFALA----VNKTLVSLAVGYNGIGSEAVIAMAANKRLISLDVEYTGIST 326

Query: 525 FHSAIYSLKHMLFYSLCINY------LQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
             + + +        +C+N        +GA+ LA S     + +T++++++N I  DGA 
Sbjct: 327 AVAEVAAALAASTSLVCLNVGANGFGDEGARRLAAS-----KTITTLNVSYNRIGRDGAL 381

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
           A+A +        +TSL+LA N +   G  AL D
Sbjct: 382 ALAAS------KMITSLDLAGNIIGTAGIKALVD 409


>gi|156369685|ref|XP_001628105.1| predicted protein [Nematostella vectensis]
 gi|156215073|gb|EDO36042.1| predicted protein [Nematostella vectensis]
          Length = 681

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 29/279 (10%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+ A G  A    L  N   + L+L+ N IG  G   L ++L DN  +  + LS   +R
Sbjct: 278 HGLGAEGTLAIAKSLMKNTYTENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLSMNFIR 337

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            EG  A A++L  N  LR L L +N +      + AEAL EN T+  L L+ N  G +G 
Sbjct: 338 SEGGLAFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEIGEMGG 397

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L  G+  N  L+                              LD+  N I  KGA  +
Sbjct: 398 IFLGAGVASNYGLKH-----------------------------LDLSWNCIRFKGAVGM 428

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+ +K    L   N+  N +   G   +   LK+N  +  +D+  N I       +A+ +
Sbjct: 429 AQALKTNDCLTHFNMSWNGLSLLGCVALGRFLKRNEALKELDISNNRIGLLATQKLAQGI 488

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             +  +T+L +  NPIG  G + L  V+K H  +  L L
Sbjct: 489 AAHPNLTALKVGKNPIGDGGVECLLNVIKAHDKLKYLSL 527



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 126/300 (42%), Gaps = 1/300 (0%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL +E       F  E      + M     G EG   +A+SL  N   E +    N I  
Sbjct: 251 KLCKEKDLVPVTFLTERLKEPGIVMRHHGLGAEGTLAIAKSLMKNTYTENLDLTDNYIGG 310

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G  A   +L  N  +  ++LS N I  EG      +L  N  + +L L S  L D+ AK
Sbjct: 311 PGGMALAEMLYDNCFITEIDLSMNFIRSEGGLAFAKMLHKNQSLRKLVLRSNHLTDKDAK 370

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A AE LK N  L  L+L++N I   G   L   +  N  ++ L L+ N     GA  +A+
Sbjct: 371 AFAEALKENRTLLHLDLSHNEIGEMGGIFLGAGVASNYGLKHLDLSWNCIRFKGAVGMAQ 430

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ N  L   ++  N +   G  AL   L  R   L  LDI NN I       +A+ I 
Sbjct: 431 ALKTNDCLTHFNMSWNGLSLLGCVALGRFL-KRNEALKELDISNNRIGLLATQKLAQGIA 489

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
              +L  + +  N IGD G E + + +K +  +  + L    +  K    I  + K+  V
Sbjct: 490 AHPNLTALKVGKNPIGDGGVECLLNVIKAHDKLKYLSLEDITVSPKVFDEIKELEKERGV 549



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 147/322 (45%), Gaps = 23/322 (7%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+S      EG    A+ L  NQ+  ++   +N +T    KAF   L+ N  L  L
Sbjct: 326 ITEIDLSMNFIRSEGGLAFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHL 385

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IG+ G   L   +  N G++ L LS   +R +GA  +A+ LK N  L    ++ 
Sbjct: 386 DLSHNEIGEMGGIFLGAGVASNYGLKHLDLSWNCIRFKGAVGMAQALKTNDCLTHFNMSW 445

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +   G  +L   L  N  ++ L ++ N  G L    LA+G+  + +L  L +  N IG
Sbjct: 446 NGLSLLGCVALGRFLKRNEALKELDISNNRIGLLATQKLAQGIAAHPNLTALKVGKNPIG 505

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG--- 400
           D G+  L++ + +   KL  L + + ++S K    V + IK  +    + +    IG   
Sbjct: 506 DGGVECLLNVIKAHD-KLKYLSLEDITVSPK----VFDEIKELEKERGVTIITGGIGGYK 560

Query: 401 -----DEGAEKIADALKQNRTITTIDLGG--NNIHSKGAS--AIARVLKDNSVITS---L 448
                  G   + + + +NR +  ID     +  HS G S    ++ LK+  ++ +   L
Sbjct: 561 RPKEMPPGMRILLNFISENR-LRLIDWFNQFDKDHSGGISREEFSKGLKETGLVMTKRQL 619

Query: 449 D--LAYNPIGADGAKALSEVLK 468
           D  + Y  I  DG    SE+L+
Sbjct: 620 DRLMEYIDINNDGEIEYSELLR 641



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 118/258 (45%), Gaps = 8/258 (3%)

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           HG  +G EG  A+   L  +      LD+ +N I   G   +AE + +   +  I+L MN
Sbjct: 278 HG--LGAEGTLAIAKSLM-KNTYTENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLSMN 334

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            I  EG    A  L +N+++  + L  N++  K A A A  LK+N  +  LDL++N IG 
Sbjct: 335 FIRSEGGLAFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEIGE 394

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCS 517
            G   L   +  +  +  L L W  I   GA  +A  L+ N+ ++  ++  NGL      
Sbjct: 395 MGGIFLGAGVASNYGLKHLDLSWNCIRFKGAVGMAQALKTNDCLTHFNMSWNGL---SLL 451

Query: 518 GCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
           GC  L  F     +LK +   +  I  L   K LAQ     +  LT++ +  N I D G 
Sbjct: 452 GCVALGRFLKRNEALKELDISNNRIGLLATQK-LAQGI-AAHPNLTALKVGKNPIGDGGV 509

Query: 578 FAIAQALKANEDVAVTSL 595
             +   +KA++ +   SL
Sbjct: 510 ECLLNVIKAHDKLKYLSL 527



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           ++ + A+G   +A+ +        ++L  N IG  G   +A+ L  N  IT IDL  N I
Sbjct: 277 HHGLGAEGTLAIAKSLMKNTYTENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLSMNFI 336

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            S+G  A A++L  N  +  L L  N +    AKA +E LK +  +  L L   +IG  G
Sbjct: 337 RSEGGLAFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEIGEMG 396

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG 547
             F+   +  N                               Y LKH+     CI + +G
Sbjct: 397 GIFLGAGVASN-------------------------------YGLKHLDLSWNCIRF-KG 424

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
           A  +AQ+ K  N+ LT  ++++N +   G  A+ + LK NE  A+  L+++NN
Sbjct: 425 AVGMAQALK-TNDCLTHFNMSWNGLSLLGCVALGRFLKRNE--ALKELDISNN 474



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 43/193 (22%)

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           + ++ +GA+G  A+++ L  +     L L    IG  G   +A+ML  N  I+ +DL  N
Sbjct: 275 MRHHGLGAEGTLAIAKSLMKNTYTENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLSMN 334

Query: 510 GLRDEVCSGCNGLSF---FHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK-------- 556
            +R E      GL+F    H    SL+ ++  S   N+L  + AK  A++ K        
Sbjct: 335 FIRSE-----GGLAFAKMLHKN-QSLRKLVLRS---NHLTDKDAKAFAEALKENRTLLHL 385

Query: 557 -------------------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
                                N  L  +DL++N IR  GA  +AQALK N+   +T  N+
Sbjct: 386 DLSHNEIGEMGGIFLGAGVASNYGLKHLDLSWNCIRFKGAVGMAQALKTND--CLTHFNM 443

Query: 598 ANNFLTKFGQSAL 610
           + N L+  G  AL
Sbjct: 444 SWNGLSLLGCVAL 456


>gi|11545912|ref|NP_071445.1| nucleotide-binding oligomerization domain-containing protein 2 [Homo
            sapiens]
 gi|20137973|sp|Q9HC29.1|NOD2_HUMAN RecName: Full=Nucleotide-binding oligomerization domain-containing
            protein 2; AltName: Full=Caspase recruitment
            domain-containing protein 15; AltName: Full=Inflammatory
            bowel disease protein 1
 gi|11275614|gb|AAG33677.1|AF178930_1 NOD2 protein [Homo sapiens]
 gi|119603173|gb|EAW82767.1| caspase recruitment domain family, member 15 [Homo sapiens]
 gi|157170222|gb|AAI52738.1| Nucleotide-binding oligomerization domain containing 2 [synthetic
            construct]
 gi|162317702|gb|AAI56572.1| Nucleotide-binding oligomerization domain containing 2 [synthetic
            construct]
 gi|261858064|dbj|BAI45554.1| nucleotide-binding oligomerization domain containing 2 [synthetic
            construct]
          Length = 1040

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1000 AEALLQALERNDTILEVWLRGN 1021



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N I + GA  
Sbjct: 831  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N L+DE VCS   GL        SLK +   + CI YL GA+ L Q
Sbjct: 951  LAKNVMLEELCLEENHLQDEGVCSLAEGL----KKNSSLKILKLSNNCITYL-GAEALLQ 1005

Query: 554  SFK 556
            + +
Sbjct: 1006 ALE 1008



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 997  YLGAEALLQALERNDTILEVWLRGNTF 1023



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 1005

Query: 353  GLSSRKGKLAVLDIGNN 369
             L      L V   GN 
Sbjct: 1006 ALERNDTILEVWLRGNT 1022


>gi|410226008|gb|JAA10223.1| NLR family, CARD domain containing 5 [Pan troglodytes]
 gi|410304708|gb|JAA30954.1| NLR family, CARD domain containing 5 [Pan troglodytes]
 gi|410349473|gb|JAA41340.1| NLR family, CARD domain containing 5 [Pan troglodytes]
          Length = 1866

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 137/315 (43%), Gaps = 31/315 (9%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DE--------------------------GAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            D                           GA  +A AL  +  +  I L  NN+    A  
Sbjct: 1676 DPTALGLAQELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNL----AGG 1731

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            + R  K+  ++  +DL    I    AK L+        +  + L W  +G   A  +A +
Sbjct: 1732 VLRFCKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQV 1791

Query: 495  LRYNNTISILDLRAN 509
            L     +  +DL  N
Sbjct: 1792 LPQMGRLKRVDLEKN 1806



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 137/341 (40%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL-----LEN---------------------S 302
            +L     LR ++L+ N I  +G   LAE+L     LE                       
Sbjct: 1629 ILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R            L 
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLR-----FCKELPLLR 1743

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1744 QIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D  + L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMVQHL 1844



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 159/393 (40%), Gaps = 43/393 (10%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMI--DYSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + L+ L L+  N+   D +    L   LL 
Sbjct: 1433 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 1492

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----- 355
             S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L      
Sbjct: 1493 LSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML 1552

Query: 356  ----------------------SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                                  S    L  L +  NSI   G  H++E ++   SL  ++
Sbjct: 1553 KRLDLSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELD 1612

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N IGD G + +A  L     +  IDL  N+I S G   +A  L     +  L L  N
Sbjct: 1613 LSHNQIGDAGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCN 1672

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             +G   A  L++ L  H  +  L L +  +G  GA  +A  L  +  +  + L  N L  
Sbjct: 1673 ALGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAG 1730

Query: 514  EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
             V   C  L         L+ +   S  I+  Q AK L  SF     AL  I L++N + 
Sbjct: 1731 GVLRFCKELPL-------LRQIDLVSCKIDN-QTAKLLTSSFTSC-PALEVILLSWNLLG 1781

Query: 574  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            D+ A  +AQ L   +   +  ++L  N +T  G
Sbjct: 1782 DEAAAELAQVLP--QMGRLKRVDLEKNQITALG 1812



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 10/255 (3%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 1501 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 1560

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 1561 LLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 1620

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            +G + +A +L     +  +DL  N +     S   G+    S +   + +    L  N L
Sbjct: 1621 AGVQHLATILPGLPELRKIDLSVNSI-----SSAGGVQLAESLVLC-RRLEELMLGCNAL 1674

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFL 602
                 L  + + + + L  + L F+ +   GA ++AQAL  +   E++++   NLA   L
Sbjct: 1675 GDPTALGLA-QELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVL 1733

Query: 603  TKFGQSALTDAKDLV 617
                +  L    DLV
Sbjct: 1734 RFCKELPLLRQIDLV 1748



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 27/233 (11%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R   ++ ++ G        + L G   +  L       GD    AL   L +  G+L +L
Sbjct: 661 REAPIHLDFDGCPLEPHCPEALVGCGQIENLSFRSRKCGDTFAEALSRSLPT-MGRLQML 719

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  + I+A+G  H+ + +  C  L  ++   N + D+    I + L     +  +DL  
Sbjct: 720 GLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSS 779

Query: 425 NNIHSKGASAIARV-------------------LKDNSVITSLDLAYNP--IGADGAKAL 463
           N+I       +ARV                   L      T+ +L   P    +DG +  
Sbjct: 780 NSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKG 839

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           ++         TL+L  CQ+    AE +  +L+    +  +DL  N L DE C
Sbjct: 840 AQSRSL-----TLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGC 887



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 170/450 (37%), Gaps = 75/450 (16%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            F    ++   +++F  +L     L  ++LS N +GD G++CL + L        L LS  
Sbjct: 1222 FTGCSLSQEHVESFCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGLLDLSHN 1281

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             +  E A  + E L   S  RV E + N+     F        E+   ++L L+      
Sbjct: 1282 SVSQESALYLVETLP--SCPRVREASVNLGSEQSFR--IHFSREDQAGKTLRLSECSFRP 1337

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS------GLSS---------RKGKL 361
               + LA GL  +  L EL L    +G + +  L+S      GL S         R G L
Sbjct: 1338 EHVSRLATGLSQSLQLTELTLTQCCLGQKQLAILLSLVGRPAGLFSLRVQEPWADRAGVL 1397

Query: 362  AVLDIGNN--------SISAK-----------------------------GAFH---VAE 381
            ++L++           SIS                               GA H   V +
Sbjct: 1398 SLLEVCAQASGSVTEISISETQQQLCVQLEFPRQEENPEAVALRLAHCDLGAHHSLLVGQ 1457

Query: 382  YIKNCK-----SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             ++ C      SL  +NL  +D  D  +  +   L     + T  L  + + ++G + +A
Sbjct: 1458 LMETCARLQQLSLSQVNLCEDD--DASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLA 1515

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
              L     +  LDL+ N    +G KAL   L+    +  L L    + +S    +   L 
Sbjct: 1516 SGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLS 1575

Query: 497  YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQS 554
            +   +  L L  N + D    GC  LS    A  SL+ +    L  N +   G + LA  
Sbjct: 1576 HMTCLQSLRLNRNSIGD---VGCCHLSEALRAATSLEEL---DLSHNQIGDAGVQHLATI 1629

Query: 555  FKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
               + E L  IDL+ N I   G   +A++L
Sbjct: 1630 LPGLPE-LRKIDLSVNSISSAGGVQLAESL 1658



 Score = 42.0 bits (97), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 17/242 (7%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  GD     L+ SL      + +  A + ITA GI      L     LK ++   N + 
Sbjct: 696 RKCGDTFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLS 755

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE--------LNN 283
           D+ V  + ++L     + +L LSS  +       +A +      +R+L+        L +
Sbjct: 756 DQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLS 815

Query: 284 NMIDYSGFTSLAEALLENSTIR--------SLHLNGNYGGALGANALAKGLEGNKSLREL 335
              + +     A  L E+   R        +L L         A AL   L+    L E+
Sbjct: 816 PPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQEGPHLEEV 875

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN + DEG R LM+  +S+      LD+ +N +S  G   V   +  C +L  +++ 
Sbjct: 876 DLSGNQLEDEGCR-LMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHIS 934

Query: 396 MN 397
           + 
Sbjct: 935 LQ 936


>gi|399497964|emb|CCG20310.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKCSHLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKILNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K +  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKCSHLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   E+  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKCSHLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKEEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKILNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKCSHLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A S K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|443710450|gb|ELU04703.1| hypothetical protein CAPTEDRAFT_222965 [Capitella teleta]
          Length = 516

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 2/248 (0%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F ++L   SSVD+   N G +G   L+  L  N     ++   N +   G+     ++  
Sbjct: 118 FHRKLAEDSSVDLKHYNLGSKGAMALSIPLVINTRISSLNLKDNNLNEEGVVWIGRMMAE 177

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  +  LNLS N IG  G   + ++L  N  ++ L +S  +  D  AK + + ++ +  L
Sbjct: 178 NTTVTELNLSHNNIGSHGALVMAEVLRQNIRLKSLDISGNNFTDGDAKVLTKPIEEHPNL 237

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           R L L +N           + + EN+T++ L L  N     GA  LA+G++ N SL+ LH
Sbjct: 238 RYLNLGSNCFGSEAGVLFKDLIAENATLQELDLRWNQIRMKGAQELARGMKENVSLKSLH 297

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N   D+G +AL   L  +   L+ LDI  N I ++G   + + +   + L  + +  
Sbjct: 298 LGWNGFSDDGAKALAEAL--KTCPLSYLDISANRIGSEGFLAMIKILGQNEDLKELKISG 355

Query: 397 NDIGDEGA 404
           N +G+  A
Sbjct: 356 NPVGEAAA 363



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 16/278 (5%)

Query: 348 RALMSGLSSRK-GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           +AL+S    RK  + + +D+ + ++ +KGA  ++  +     +  +NL  N++ +EG   
Sbjct: 111 KALLSSRFHRKLAEDSSVDLKHYNLGSKGAMALSIPLVINTRISSLNLKDNNLNEEGVVW 170

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           I   + +N T+T ++L  NNI S GA  +A VL+ N  + SLD++ N      AK L++ 
Sbjct: 171 IGRMMAENTTVTELNLSHNNIGSHGALVMAEVLRQNIRLKSLDISGNNFTDGDAKVLTKP 230

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           ++ H N+  L LG    G+       D++  N T+  LDLR N +R     G   L+   
Sbjct: 231 IEEHPNLRYLNLGSNCFGSEAGVLFKDLIAENATLQELDLRWNQIR---MKGAQELARGM 287

Query: 527 SAIYSLK--HMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
               SLK  H+ +     +   GAK LA++ K     L+ +D++ N I  +G  A+ + L
Sbjct: 288 KENVSLKSLHLGWNGFSDD---GAKALAEALKTC--PLSYLDISANRIGSEGFLAMIKIL 342

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 622
             NED  +  L ++ N     G++A     DL+  M E
Sbjct: 343 GQNED--LKELKISGN---PVGEAAALAGMDLLLAMPE 375



 Score = 39.3 bits (90), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L    KE  +  S+ +    F D+G   LAE+L     +  +  +AN I + G  A  
Sbjct: 281 QELARGMKENVSLKSLHLGWNGFSDDGAKALAEALKTCPLSY-LDISANRIGSEGFLAMI 339

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            +L  N  LK L +SGNP+G+       D+L+    +   +L  VD+
Sbjct: 340 KILGQNEDLKELKISGNPVGEAAALAGMDLLLAMPELHLDELEMVDI 386


>gi|399497922|emb|CCG20289.1| Ran GTPase activating protein 2 [Solanum berthaultii]
 gi|399497926|emb|CCG20291.1| Ran GTPase activating protein 2 [Solanum berthaultii]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 149/305 (48%), Gaps = 15/305 (4%)

Query: 312 NYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N   AL   N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ 
Sbjct: 196 NEAAALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDG 253

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS + A  V+E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+
Sbjct: 254 ISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSE 313

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G S +   L   S +  LDL  N  G +    L + L  H N+  + L +  +   GA  
Sbjct: 314 GGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIA 373

Query: 491 VADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QG 547
           +A+ L+ +  ++++L++  N +  E  S           +  L      SL  N L  +G
Sbjct: 374 IANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEG 427

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           A  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G 
Sbjct: 428 AIQIAKALE-GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGV 484

Query: 608 SALTD 612
             L +
Sbjct: 485 DELKE 489



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 2/275 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    G++G+    + L      EE+    +GI+     A   ++ S   LK L+  
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GDEG   + +I+  +  +E  + SS  +  EG   + E L   S L+ L+L +NM 
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHLHGNSIGDE 345
                  L +AL+++  +  ++L+       GA A+A  L+ +  SL  L + GN I  E
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              A+ S   + K  LA L +G N +  +GA  +A+ ++    L+ +++  N +   GA 
Sbjct: 399 AASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGAR 457

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +A  +        +++ GN I  +G   +  + K
Sbjct: 458 VLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L+ +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 47/294 (15%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N  +A    ++        +L ++NL  N +G++G     
Sbjct: 176 LATLKDQLKEVDLSDFVAGRNEAAALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
               +   +    ++G+ G   + + L   + +  LDLR N    EV     GL    + 
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV-----GLVLCKAL 350

Query: 529 IYSLKHMLFYSLCINYL----QGAKCLAQSFK---------------------------- 556
           I   KH     + ++YL    +GA  +A + K                            
Sbjct: 351 I---KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCI 407

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
              + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 408 AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|348583944|ref|XP_003477732.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2-like [Cavia porcellus]
          Length = 1059

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 29/259 (11%)

Query: 256  VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            +D    G   + +LL    I + L L +N I   G   L E  L    ++ L L  N   
Sbjct: 816  LDHNSVGDIGVEQLLPCIGICKALYLRDNNISDRGICKLIEHALHYGQLQKLALFNNKLT 875

Query: 316  ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
               A+A+AK LE N++   L L                             GNN I+A G
Sbjct: 876  DGCAHAMAKLLECNQNFLALRL-----------------------------GNNHITAAG 906

Query: 376  AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            A  +A+ ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GN+I S GA A+
Sbjct: 907  AQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAEALGDHQSLKWLSLVGNSIGSMGAQAL 966

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
            A++L+ N  +  L L  N +  +G  +L+E LK + ++  LKL    + + G E +   L
Sbjct: 967  AQMLEKNVALEELCLEENHLCDEGVCSLAEGLKRNSSLKVLKLSNNSVTSRGVEALLQAL 1026

Query: 496  RYNNTISILDLRANGLRDE 514
              NNTI  + LR N    E
Sbjct: 1027 ESNNTILEVWLRGNTFSSE 1045



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 9/251 (3%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKN 272
            LQ  +AL+   L  N +GD GV    + L+   G+ + L L   ++ D G   + E   +
Sbjct: 808  LQQPVALQ---LDHNSVGDIGV----EQLLPCIGICKALYLRDNNISDRGICKLIEHALH 860

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
               L+ L L NN +      ++A+ L  N    +L L  N+  A GA  LA+GL  N SL
Sbjct: 861  YGQLQKLALFNNKLTDGCAHAMAKLLECNQNFLALRLGNNHITAAGAQVLAQGLRRNASL 920

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            + L   GN++GDEG +AL   L   +  L  L +  NSI + GA  +A+ ++   +L  +
Sbjct: 921  QFLGFWGNTVGDEGAQALAEALGDHQS-LKWLSLVGNSIGSMGAQALAQMLEKNVALEEL 979

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
             L  N + DEG   +A+ LK+N ++  + L  N++ S+G  A+ + L+ N+ I  + L  
Sbjct: 980  CLEENHLCDEGVCSLAEGLKRNSSLKVLKLSNNSVTSRGVEALLQALESNNTILEVWLRG 1039

Query: 453  NPIGADGAKAL 463
            N   ++  + L
Sbjct: 1040 NTFSSEEIEKL 1050



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L  NQ    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 882  MAKLLECNQNFLALRLGNNHITAAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAEA 941

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  ++ L L    +   GA+A+A++L+ N  L  L L  N +   G  SLAE L  N
Sbjct: 942  LGDHQSLKWLSLVGNSIGSMGAQALAQMLEKNVALEELCLEENHLCDEGVCSLAEGLKRN 1001

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N   + G  AL + LE N ++ E+ L GN+   E I  L
Sbjct: 1002 SSLKVLKLSNNSVTSRGVEALLQALESNNTILEVWLRGNTFSSEEIEKL 1050



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 31/236 (13%)

Query: 173  NFGDEGLFFLAE-SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
            N  D G+  L E +L Y Q  ++++   N +T     A   +L+ N     L L  N I 
Sbjct: 845  NISDRGICKLIEHALHYGQL-QKLALFNNKLTDGCAHAMAKLLECNQNFLALRLGNNHIT 903

Query: 232  DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
              G + L   L  NA ++ L      + DEGA+A+A                        
Sbjct: 904  AAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALA------------------------ 939

Query: 292  TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
                EAL ++ +++ L L GN  G++GA ALA+ LE N +L EL L  N + DEG+ +L 
Sbjct: 940  ----EALGDHQSLKWLSLVGNSIGSMGAQALAQMLEKNVALEELCLEENHLCDEGVCSLA 995

Query: 352  SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
             GL  R   L VL + NNS++++G   + + +++  ++L + L  N    E  EK+
Sbjct: 996  EGL-KRNSSLKVLKLSNNSVTSRGVEALLQALESNNTILEVWLRGNTFSSEEIEKL 1050



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 78/149 (52%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LA+ L  N + + + F  N +   G +A    L  + +LK L
Sbjct: 892  FLALRLGNNHITAAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAEALGDHQSLKWL 951

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L DEG  ++AE LK NS L+VL+L+N
Sbjct: 952  SLVGNSIGSMGAQALAQMLEKNVALEELCLEENHLCDEGVCSLAEGLKRNSSLKVLKLSN 1011

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N +   G  +L +AL  N+TI  + L GN
Sbjct: 1012 NSVTSRGVEALLQALESNNTILEVWLRGN 1040


>gi|14488149|emb|CAC42117.1| LRR-containing protein [Homo sapiens]
          Length = 1013

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 737 VGHLKLTFCSVGPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 793

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 794 YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 852

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 853 NNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 912

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 913 GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 972

Query: 488 AEFVADMLRYNNTISILDLRAN 509
           AE +   L  N+TI  + LR N
Sbjct: 973 AEALLQALERNDTILEVWLRGN 994



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 10/243 (4%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 748 GPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 803

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N I + GA  
Sbjct: 804 GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQV 863

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 864 LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 923

Query: 495 LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
           L  N  +  L L  N L+DE VCS   GL        SLK +   + CI YL GA+ L Q
Sbjct: 924 LAKNVMLEELCLEENHLQDEGVCSLAEGL----KKNSSLKILKLSNNCITYL-GAEALLQ 978

Query: 554 SFK 556
           + +
Sbjct: 979 ALE 981



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 791 KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 850

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN I  +G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 851 LGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 910

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 911 NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 969

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNI 427
             GAE +  AL++N TI  + L GN  
Sbjct: 970 YLGAEALLQALERNDTILEVWLRGNTF 996



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 836  MAKLLACRQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 895

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 896  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 955

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 956  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1004



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 799 NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITA 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 859 AGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 919 ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 978

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GN 
Sbjct: 979 ALERNDTILEVWLRGNT 995


>gi|399497924|emb|CCG20290.1| Ran GTPase activating protein 2 [Solanum berthaultii]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 149/305 (48%), Gaps = 15/305 (4%)

Query: 312 NYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N   AL   N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ 
Sbjct: 196 NEAAALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDG 253

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS + A  V+E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+
Sbjct: 254 ISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSE 313

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G S +   L   S +  LDL  N  G +    L + L  H N+  + L +  +   GA  
Sbjct: 314 GGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIA 373

Query: 491 VADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QG 547
           +A+ L+ +  ++++L++  N +  E  S           +  L      SL  N L  +G
Sbjct: 374 IANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEG 427

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           A  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G 
Sbjct: 428 AIQIAKALE-GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGV 484

Query: 608 SALTD 612
             L +
Sbjct: 485 DELKE 489



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 2/275 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    G++G+    + L      EE+    +GI+     A   ++ S   LK L+  
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GDEG   + +I+  +  +E  + SS  +  EG   + E L   S L+ L+L +NM 
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHLHGNSIGDE 345
                  L +AL+++  +  ++L+       GA A+A  L+ +  SL  L + GN I  E
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              A+ S +++++  LA L +G N +  +GA  +A+ ++    L+ +++  N +   GA 
Sbjct: 399 AASAIASCIAAKQ-LLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGAR 457

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +A  +        +++ GN I  +G   +  + K
Sbjct: 458 VLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L+ +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 47/294 (15%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N  +A    ++        +L ++NL  N +G++G     
Sbjct: 176 LATLKDQLKEVDLSDFVAGRNEAAALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
               +   +    ++G+ G   + + L   + +  LDLR N    EV     GL    + 
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV-----GLVLCKAL 350

Query: 529 IYSLKHMLFYSLCINYL----QGAKCLAQSFK---------------------------- 556
           I   KH     + ++YL    +GA  +A + K                            
Sbjct: 351 I---KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCI 407

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
              + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 408 AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|401414813|ref|XP_003871903.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488124|emb|CBZ23370.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 442

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 27/324 (8%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K +  VLQ       ++L+G  +G  G   +   L  N  V  L LS  +L D GA AIA
Sbjct: 29  KKWKSVLQET----RVDLAGRALGPRGALIVGAALSKNTYVTSLDLSQNELGDGGAIAIA 84

Query: 268 ELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLEN-----------STIRSLHLNGNYGG 315
            +L+ N+ L+ L L +N+M D  G  +LA A + N            T+ SL L GN  G
Sbjct: 85  SMLRVNTQLQHLNLSHNDMTDIGGI-ALASAFIPNVSPSGQPGQWNRTLFSLVLMGNKFG 143

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
                A++     ++ L  + L  N++G  G + LM   + ++  L V  +  N++  +G
Sbjct: 144 DDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMR--AYQRNPLCVYQLAANALGDEG 201

Query: 376 AFHVAEYIKNC--KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             ++ E ++    KS   +NLY N I   G E +   L  +  +  + L GN I  KG  
Sbjct: 202 TVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSSIVQDVSLAGNTIGFKGVQ 261

Query: 434 AIARVLKDNSVITS-----LDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASG 487
           A+ R L D +VI S     L+L+ N IG +GA +++ ++K +  ++  L +   +I   G
Sbjct: 262 ALQRQLTDAAVIASCTLRILNLSNNWIGDEGAASVAAIIKANIPSLERLDVSENKITDVG 321

Query: 488 AEFVADMLRYNNTISILDLRANGL 511
           A  +      N  + +L+  AN L
Sbjct: 322 ATAIVTAALQNTHLLLLNCEANRL 345



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 19/319 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA---- 219
            +S+D+S    GD G   +A  L  N   + ++ + N +T  G  A       N++    
Sbjct: 65  VTSLDLSQNELGDGGAIAIASMLRVNTQLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQ 124

Query: 220 -------LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
                  L +L L GN  GD+ +  + +    +  + R+ LS  ++   G K +    + 
Sbjct: 125 PGQWNRTLFSLVLMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQR 184

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           N +  V +L  N +   G   L EAL      +  +L+L  N     G  A+ + L  + 
Sbjct: 185 NPLC-VYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSS 243

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSS----RKGKLAVLDIGNNSISAKGAFHVAEYIK-N 385
            ++++ L GN+IG +G++AL   L+         L +L++ NN I  +GA  VA  IK N
Sbjct: 244 IVQDVSLAGNTIGFKGVQALQRQLTDAAVIASCTLRILNLSNNWIGDEGAASVAAIIKAN 303

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  +++  N I D GA  I  A  QN  +  ++   N + +K   A+ R++++   +
Sbjct: 304 IPSLERLDVSENKITDVGATAIVTAALQNTHLLLLNCEANRLEAKAVDAVVRLIRETRTL 363

Query: 446 TSLDLAYNPIGADGAKALS 464
           TSL++A     AD  + L+
Sbjct: 364 TSLNVAGCVNSADHRRTLT 382



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T +DL G  +  +GA  +   L  N+ +TSLDL+ N +G  GA A++ +L+ +  +  L 
Sbjct: 38  TRVDLAGRALGPRGALIVGAALSKNTYVTSLDLSQNELGDGGAIAIASMLRVNTQLQHLN 97

Query: 478 LG---WCQIG--ASGAEFVADML------RYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           L       IG  A  + F+ ++       ++N T+  L L  N   D+     +  +  H
Sbjct: 98  LSHNDMTDIGGIALASAFIPNVSPSGQPGQWNRTLFSLVLMGNKFGDDTLLAMSNAAACH 157

Query: 527 SAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                 + +    L  N +   G KCL ++++     L    LA N + D+G   + +AL
Sbjct: 158 ------RDLTRVDLSWNNVGQNGTKCLMRAYQ--RNPLCVYQLAANALGDEGTVYLCEAL 209

Query: 585 KANEDVAVTSLNLANNFLTKFGQSAL 610
           +     + T+LNL  N ++  G  A+
Sbjct: 210 QRYGGKSQTTLNLYRNSISCPGTEAV 235



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 559 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           N  +TS+DL+ NE+ D GA AIA  L+ N    +  LNL++N +T  G  AL  A
Sbjct: 62  NTYVTSLDLSQNELGDGGAIAIASMLRVN--TQLQHLNLSHNDMTDIGGIALASA 114


>gi|449273366|gb|EMC82861.1| Nucleotide-binding oligomerization domain-containing protein 1
           [Columba livia]
          Length = 951

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 39/283 (13%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+I D G++ L+   S    KLAV+ +  N ++  G   + E +   +++ ++ L
Sbjct: 706 LDLDNNNINDYGVKELLPCFS----KLAVIRLSVNQVTDHGVRILYEELSKYQTVTYLGL 761

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ +A  +++  ++  + +G N I S+G   +A+ ++ +  +  + +  N 
Sbjct: 762 YNNQITDVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNH 821

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G +GAKA ++ L+ H  +  + L +  I   G + +A+ +++NN++ I  L  N L DE
Sbjct: 822 VGDEGAKAFAQALRNHPTLTNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDE 881

Query: 515 VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRD 574
                        A  S   ML                     VN+ L  + L  N I  
Sbjct: 882 -------------AAMSFAEML--------------------KVNKKLVHLWLIQNRITA 908

Query: 575 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
           +G   +++ALK  E+ A+  + L  N +++    A  + K +V
Sbjct: 909 EGVKYLSEALK--ENTAIKEVCLNGNLISQEEAKAFENDKRIV 949



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 4/236 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   G+K    +L     L  + LS N + D GV+ L + L     V  L L +  + 
Sbjct: 711 NNINDYGVKE---LLPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQTVTYLGLYNNQIT 767

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GAK +A+L++  S L  +++  N I   G   LA+A+ ++ T+  + + GN+ G  GA
Sbjct: 768 DVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNHVGDEGA 827

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A A+ L  + +L  + L  N I  EG +++   +      + +  +  N +  + A   
Sbjct: 828 KAFAQALRNHPTLTNVSLAFNGITTEGGKSIAEAM-QHNNSVRIFWLTKNELDDEAAMSF 886

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           AE +K  K L+ + L  N I  EG + +++ALK+N  I  + L GN I  + A A 
Sbjct: 887 AEMLKVNKKLVHLWLIQNRITAEGVKYLSEALKENTAIKEVCLNGNLISQEEAKAF 942



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 3/195 (1%)

Query: 159 KELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +EL  + +V   G       D G  ++A+ +    + E V   AN IT+ G K     +Q
Sbjct: 748 EELSKYQTVTYLGLYNNQITDVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQ 807

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            +  +  + + GN +GDEG K     L ++  +  + L+   +  EG K+IAE +++N+ 
Sbjct: 808 KSKTMFEIGMWGNHVGDEGAKAFAQALRNHPTLTNVSLAFNGITTEGGKSIAEAMQHNNS 867

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +R+  L  N +D     S AE L  N  +  L L  N   A G   L++ L+ N +++E+
Sbjct: 868 VRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLWLIQNRITAEGVKYLSEALKENTAIKEV 927

Query: 336 HLHGNSIGDEGIRAL 350
            L+GN I  E  +A 
Sbjct: 928 CLNGNLISQEEAKAF 942



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 4/204 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           K+ L  F+K     + + +S     D G+  L E L   QT   +    N IT  G K  
Sbjct: 719 KELLPCFSK----LAVIRLSVNQVTDHGVRILYEELSKYQTVTYLGLYNNQITDVGAKYV 774

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++   +L+ + +  N I  EG KCL   +  +  +  + +    + DEGAKA A+ L
Sbjct: 775 AKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNHVGDEGAKAFAQAL 834

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +N+  L  + L  N I   G  S+AEA+  N+++R   L  N      A + A+ L+ NK
Sbjct: 835 RNHPTLTNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNK 894

Query: 331 SLRELHLHGNSIGDEGIRALMSGL 354
            L  L L  N I  EG++ L   L
Sbjct: 895 KLVHLWLIQNRITAEGVKYLSEAL 918



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 32/188 (17%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L +  ++ +    + M G + GDEG    A++L  + T   VS A NGIT 
Sbjct: 793 KITSEGGKCLAQAIQKSKTMFEIGMWGNHVGDEGAKAFAQALRNHPTLTNVSLAFNGITT 852

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    +Q N +++   L+ N                            +L DE A 
Sbjct: 853 EGGKSIAEAMQHNNSVRIFWLTKN----------------------------ELDDEAAM 884

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           + AE+LK N  L  L L  N I   G   L+EAL EN+ I+ + LNGN    L +   AK
Sbjct: 885 SFAEMLKVNKKLVHLWLIQNRITAEGVKYLSEALKENTAIKEVCLNGN----LISQEEAK 940

Query: 325 GLEGNKSL 332
             E +K +
Sbjct: 941 AFENDKRI 948



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 14/211 (6%)

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           EK+     +      + L   N  S   SAI+ V+       +LDL  N I   G K   
Sbjct: 663 EKVGKLAAKRMHANYVKLTYCNASSADCSAISFVMHHFQKRLALDLDNNNINDYGVK--- 719

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           E+L     +  ++L   Q+   G   + + L    T++ L L  N + D       G  +
Sbjct: 720 ELLPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQTVTYLGLYNNQITDV------GAKY 773

Query: 525 FHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
               I     + +  +  N +  +G KCLAQ+ +  ++ +  I +  N + D+GA A AQ
Sbjct: 774 VAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQ-KSKTMFEIGMWGNHVGDEGAKAFAQ 832

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           AL+ +    +T+++LA N +T  G  ++ +A
Sbjct: 833 ALRNHP--TLTNVSLAFNGITTEGGKSIAEA 861


>gi|410952572|ref|XP_003982953.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Felis catus]
          Length = 953

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 99/177 (55%), Gaps = 1/177 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  L  L + NN I+  GA ++A  +  CK L  + L
Sbjct: 733 IRLSVNQITDSGVKVLCEELTKYK-ILTFLGLYNNQITDVGARYIARILDECKGLTHLKL 791

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K++++I  + + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 792 GENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNG 851

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           I  +G K+L++ L+++ ++    L   ++    AE +A+ML+ N T+  L L  N +
Sbjct: 852 ISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 1/197 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLCEELTKYKILTFLGLYNNQITDVGARYIARILDECKG-LTHLKLGENKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +K  KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A+
Sbjct: 803 CLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQ 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQWNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQR 922

Query: 498 NNTISILDLRANGLRDE 514
           N  I  + L  N ++ E
Sbjct: 923 NTGIMEICLNGNLIKPE 939



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 118/272 (43%), Gaps = 39/272 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G   +A  +K +  I  + +  N IG +GAKA +E
Sbjct: 775 YIARILDECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++  L L +  I   G + +A  L++N ++ I  L  N L DEV          
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ LA+  K VN+ L  + L  N+I   G   +A AL+
Sbjct: 885 ----------------------AESLAEMLK-VNQTLKHLWLIQNQITAKGIAQLADALQ 921

Query: 586 ANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 617
            N  +    LN   N +         D K +V
Sbjct: 922 RNTGIMEICLN--GNLIKPEEAKVFQDEKRIV 951



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 109/229 (47%), Gaps = 5/229 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK LC+ L     +  L L +  + D GA+ IA +L     L  L
Sbjct: 730 LTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   LA A+ ++ +I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L      L +  +  N +  + A  +AE +K  ++L  + L  N I
Sbjct: 850 NGISTEGGKSLAQALQWNTS-LRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             +G  ++ADAL++N  I  I L GN I  +     A+V +D   I   
Sbjct: 909 TAKGIAQLADALQRNTGIMEICLNGNLIKPEE----AKVFQDEKRIVCF 953



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 5/205 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I  SG   L E L +   +  L L  N    +GA  +A+ 
Sbjct: 720 VRELQPCFSRLTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGARYIARI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  K L  L L  N I  EG + L   L+ +K K ++ ++G   N I  +GA   AE +
Sbjct: 780 LDECKGLTHLKLGENKITSEGGKCL--ALAVKKSK-SIFEVGMWGNRIGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N I  EG + +A AL+ N ++    L  N +  + A ++A +LK N 
Sbjct: 837 RNHPSLTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLK 468
            +  L L  N I A G   L++ L+
Sbjct: 897 TLKHLWLIQNQITAKGIAQLADALQ 921



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 92/205 (44%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L E L   +    +    N IT  G +    +L     L  L
Sbjct: 730 LTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHL 789

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KCL   +  +  +  + +    + DEGAKA AE L+N+  L  L L  
Sbjct: 790 KLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAF 849

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  SLA+AL  N+++R   L  N      A +LA+ L+ N++L+ L L  N I 
Sbjct: 850 NGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQIT 909

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGN 368
            +GI  L   L    G + +   GN
Sbjct: 910 AKGIAQLADALQRNTGIMEICLNGN 934



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +    +    N IT+ G K     ++ + ++  + + GN IGDEG 
Sbjct: 770 DVGARYIARILDECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K++A+ L+ N+ LR+  L  N +D     SLA
Sbjct: 830 KAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA  L+ N  + E+ L+GN I  E
Sbjct: 890 EMLKVNQTLKHLWLIQNQITAKGIAQLADALQRNTGIMEICLNGNLIKPE 939



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 77/153 (50%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG   LA ++  +++  EV    N I   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L+L+ N I  EG K L   L  N  +    L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITAKGIAQLADALQRNTGIMEICLNGN 934


>gi|410904911|ref|XP_003965935.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Takifugu rubripes]
          Length = 929

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 136/264 (51%), Gaps = 4/264 (1%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L+L+ +++      A++ +L++   L  L+++NN I   G   L   +    TI  L +N
Sbjct: 656 LKLAYLNMFSSDCTAVSFVLQHQPKLYGLDMDNNNIGDYGVKQL-RPMFSKLTILRLSVN 714

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
             Y G++    LA+ +   K ++ L L+ N + D G   L++ +     KL V+ IG N+
Sbjct: 715 NLYDGSV--EVLAEEICKYKIIQTLGLYSNHLTDVGAE-LVARVIEECPKLQVVKIGKNN 771

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+  G   +A  I+   S+  + ++ N IGDEGAE  ++ALK + ++T + L  N I S+
Sbjct: 772 ITHVGGRRLAAAIQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSLTNLSLSVNGITSR 831

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G   +A  L+ NSV+    L  N    + A  L+E+++ +  ++ L L   ++   G   
Sbjct: 832 GGRCLAEALQHNSVLRIFWLVQNEFTDEVAPHLAELIRANTGLSHLWLISNRLTVEGIGQ 891

Query: 491 VADMLRYNNTISILDLRANGLRDE 514
           +A+ L +N T+  + ++ N +  E
Sbjct: 892 LAEALGHNTTLKEICVKGNQVSGE 915



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 4/197 (2%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             A++  L+    L  L +  N+IGD G++ L    S    KL +L +  N++       
Sbjct: 668 CTAVSFVLQHQPKLYGLDMDNNNIGDYGVKQLRPMFS----KLTILRLSVNNLYDGSVEV 723

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE I   K +  + LY N + D GAE +A  +++   +  + +G NNI   G   +A  
Sbjct: 724 LAEEICKYKIIQTLGLYSNHLTDVGAELVARVIEECPKLQVVKIGKNNITHVGGRRLAAA 783

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           ++ ++ I  + +  N IG +GA+A SE LK H ++  L L    I + G   +A+ L++N
Sbjct: 784 IQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSLTNLSLSVNGITSRGGRCLAEALQHN 843

Query: 499 NTISILDLRANGLRDEV 515
           + + I  L  N   DEV
Sbjct: 844 SVLRIFWLVQNEFTDEV 860



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 6/260 (2%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           VLQ    L  L++  N IGD GVK L  +    + +  L+LS  +L D   + +AE +  
Sbjct: 674 VLQHQPKLYGLDMDNNNIGDYGVKQLRPMF---SKLTILRLSVNNLYDGSVEVLAEEICK 730

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
             I++ L L +N +   G   +A  + E   ++ + +  N    +G   LA  ++ + S+
Sbjct: 731 YKIIQTLGLYSNHLTDVGAELVARVIEECPKLQVVKIGKNNITHVGGRRLAAAIQKSTSI 790

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            ++ + GN IGDEG  A    L +    L  L +  N I+++G   +AE +++   L   
Sbjct: 791 FDVGMWGNCIGDEGAEAFSEALKNHPS-LTNLSLSVNGITSRGGRCLAEALQHNSVLRIF 849

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N+  DE A  +A+ ++ N  ++ + L  N +  +G   +A  L  N+ +  + +  
Sbjct: 850 WLVQNEFTDEVAPHLAELIRANTGLSHLWLISNRLTVEGIGQLAEALGHNTTLKEICVKG 909

Query: 453 NPIGADGAK--ALSEVLKFH 470
           N +  +  K  A  + L FH
Sbjct: 910 NQVSGEEEKLFATEKRLFFH 929



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 90/200 (45%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L+  S + L E   + +   ++ +   +  D G   +A  +      + V    N IT  
Sbjct: 716 LYDGSVEVLAEEICKYKIIQTLGLYSNHLTDVGAELVARVIEECPKLQVVKIGKNNITHV 775

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G +     +Q + ++  + + GN IGDEG +   + L ++  +  L LS   +   G + 
Sbjct: 776 GGRRLAAAIQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSLTNLSLSVNGITSRGGRC 835

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE L++NS+LR+  L  N         LAE +  N+ +  L L  N     G   LA+ 
Sbjct: 836 LAEALQHNSVLRIFWLVQNEFTDEVAPHLAELIRANTGLSHLWLISNRLTVEGIGQLAEA 895

Query: 326 LEGNKSLRELHLHGNSIGDE 345
           L  N +L+E+ + GN +  E
Sbjct: 896 LGHNTTLKEICVKGNQVSGE 915



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 4/201 (1%)

Query: 158 AKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            K+LR   S    + +S  N  D  +  LAE +   +  + +   +N +T  G +    V
Sbjct: 696 VKQLRPMFSKLTILRLSVNNLYDGSVEVLAEEICKYKIIQTLGLYSNHLTDVGAELVARV 755

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++    L+ + +  N I   G + L   +  +  +  + +    + DEGA+A +E LKN+
Sbjct: 756 IEECPKLQVVKIGKNNITHVGGRRLAAAIQKSTSIFDVGMWGNCIGDEGAEAFSEALKNH 815

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L+ N I   G   LAEAL  NS +R   L  N      A  LA+ +  N  L 
Sbjct: 816 PSLTNLSLSVNGITSRGGRCLAEALQHNSVLRIFWLVQNEFTDEVAPHLAELIRANTGLS 875

Query: 334 ELHLHGNSIGDEGIRALMSGL 354
            L L  N +  EGI  L   L
Sbjct: 876 HLWLISNRLTVEGIGQLAEAL 896



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 27/232 (11%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           LLW+   +  I + G+++IA    +      + L   N+ S   +A++ VL+    +  L
Sbjct: 628 LLWL---LRCIFETGSKEIAQRTARGIPAGLLKLAYLNMFSSDCTAVSFVLQHQPKLYGL 684

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           D+  N IG  G K L  +      +  L+L    +     E +A+ +     I  L L +
Sbjct: 685 DMDNNNIGDYGVKQLRPMF---SKLTILRLSVNNLYDGSVEVLAEEICKYKIIQTLGLYS 741

Query: 509 NGLRD-------EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
           N L D        V   C  L        ++ H+           G + LA + +  + +
Sbjct: 742 NHLTDVGAELVARVIEECPKLQVVKIGKNNITHV-----------GGRRLAAAIQ-KSTS 789

Query: 562 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +  + +  N I D+GA A ++ALK +   ++T+L+L+ N +T  G   L +A
Sbjct: 790 IFDVGMWGNCIGDEGAEAFSEALKNHP--SLTNLSLSVNGITSRGGRCLAEA 839


>gi|399498018|emb|CCG20337.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQ    L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQPQTNLEELFLMNDGISQEAANAVSELVPSTKKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLLQPQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + K L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQPQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|399497920|emb|CCG20288.1| Ran GTPase activating protein 2 [Solanum berthaultii]
          Length = 553

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 148/305 (48%), Gaps = 15/305 (4%)

Query: 312 NYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N   AL   N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ 
Sbjct: 196 NEAAALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDG 253

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS + A  V+E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+
Sbjct: 254 ISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSE 313

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G S +   L   S +  LDL  N  G +    L + L  H N+  + L +  +   GA  
Sbjct: 314 GGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIA 373

Query: 491 VADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QG 547
           +A+ L+ +  ++++L++  N +  E  S           +  L      SL  N L  +G
Sbjct: 374 IANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEG 427

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           A  +A++ +  +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  NF+++ G 
Sbjct: 428 AIQIAKALE-GHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGV 484

Query: 608 SALTD 612
             L +
Sbjct: 485 DELKE 489



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 2/275 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    G++G+    + L      EE+    +GI+     A   ++ S   LK L+  
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GDEG   + +I+  +  +E  + SS  +  EG   + E L   S L+ L+L +NM 
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHLHGNSIGDE 345
                  L +AL+++  +  ++L+       GA A+A  L+ +  SL  L + GN I  E
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              A+ S   + K  LA L +G N +  +GA  +A+ ++    L+ +++  N +   GA 
Sbjct: 399 AASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGAR 457

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +A  +        +++ GN I  +G   +  + K
Sbjct: 458 VLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L+ +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 121/294 (41%), Gaps = 47/294 (15%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N  +A    ++        +L ++NL  N +G++G     
Sbjct: 176 LATLKDQLKEVDLSDFVAGRNEAAALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSA 528
               +   +    ++G+ G   + + L   + +  LDLR N    EV     GL    + 
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV-----GLVLCKAL 350

Query: 529 IYSLKHMLFYSLCINYL----QGAKCLAQSFK---------------------------- 556
           I   KH     + ++YL    +GA  +A + K                            
Sbjct: 351 I---KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCI 407

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
              + L  + L  NE++D+GA  IA+AL+ +  +    +N  +N L + G   L
Sbjct: 408 AAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMN--SNALRRAGARVL 459


>gi|344253491|gb|EGW09595.1| Leucine-rich repeat-containing protein LOC400891-like [Cricetulus
           griseus]
          Length = 419

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 35/296 (11%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S +++  R  G +G   LA  L  N   + +    NG+  AG +A   VL  N  +  ++
Sbjct: 27  SELNLRHRGLGPQGARALASMLTSNVYIKRLDLRDNGLCGAGAEALADVLCKNNIISDVD 86

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N IG  G++ +C  L  N  V+++QL    L ++ A+ +A LL  ++ L+ L+L+ N
Sbjct: 87  LSDNQIGAAGLQAICAALALNPAVQKMQLGGNRLEEKAAQHLAALLLRHTSLKSLDLSYN 146

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            ++     +L  AL EN+ +  L+L+ N+    GA ALAKGLE N  L+           
Sbjct: 147 QLNDLAGETLGPALAENTGLTELNLSWNHLRGPGAIALAKGLEANIFLK----------- 195

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
                             VLDI +N     GA  V E +K    L  +N+  N I   GA
Sbjct: 196 ------------------VLDISHNGFGDSGAASVGEALKANNVLEELNMRNNRISMTGA 237

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLA----YNP 454
            K+   L+ N+T+  + +  N I S+G  ++ + +++N  S +  LDL+    Y P
Sbjct: 238 LKLGLGLQVNQTLRILIISKNPIRSEGYVSLLKSVRNNRSSALELLDLSAGINYQP 293



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 29/273 (10%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+       L L    L  +GA+A+A +L +N  ++ L+L +N +  +G  +LA+ L +N
Sbjct: 20  LLRQGSASELNLRHRGLGPQGARALASMLTSNVYIKRLDLRDNGLCGAGAEALADVLCKN 79

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           + I  + L+ N  GA G  A+   L  N +++++ L GN + +E     ++ L  R   L
Sbjct: 80  NIISDVDLSDNQIGAAGLQAICAALALNPAVQKMQLGGNRL-EEKAAQHLAALLLRHTSL 138

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             LD                            L  N + D   E +  AL +N  +T ++
Sbjct: 139 KSLD----------------------------LSYNQLNDLAGETLGPALAENTGLTELN 170

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N++   GA A+A+ L+ N  +  LD+++N  G  GA ++ E LK +  +  L +   
Sbjct: 171 LSWNHLRGPGAIALAKGLEANIFLKVLDISHNGFGDSGAASVGEALKANNVLEELNMRNN 230

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +I  +GA  +   L+ N T+ IL +  N +R E
Sbjct: 231 RISMTGALKLGLGLQVNQTLRILIISKNPIRSE 263



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 13/209 (6%)

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           A  L +  + + ++L    +  +GA A+A +L  N  I  LDL  N +   GA+AL++VL
Sbjct: 17  ASCLLRQGSASELNLRHRGLGPQGARALASMLTSNVYIKRLDLRDNGLCGAGAEALADVL 76

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHS 527
             +  I+ + L   QIGA+G + +   L  N  +  + L  N L ++       L   H+
Sbjct: 77  CKNNIISDVDLSDNQIGAAGLQAICAALALNPAVQKMQLGGNRLEEKAAQHLAALLLRHT 136

Query: 528 AIYSLKHMLFYSLCINYLQG---AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
           ++ SL   L Y+  +N L G      LA+     N  LT ++L++N +R  GA A+A+ L
Sbjct: 137 SLKSLD--LSYNQ-LNDLAGETLGPALAE-----NTGLTELNLSWNHLRGPGAIALAKGL 188

Query: 585 KANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +AN  + +  L++++N     G +++ +A
Sbjct: 189 EAN--IFLKVLDISHNGFGDSGAASVGEA 215



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 35/250 (14%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+G  + L++ +  +  +GA  +A  + +   +  ++L  N +   GAE +AD L +N  
Sbjct: 22  RQGSASELNLRHRGLGPQGARALASMLTSNVYIKRLDLRDNGLCGAGAEALADVLCKNNI 81

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I+ +DL  N I + G  AI   L  N  +  + L  N +    A+ L+ +L  H ++ +L
Sbjct: 82  ISDVDLSDNQIGAAGLQAICAALALNPAVQKMQLGGNRLEEKAAQHLAALLLRHTSLKSL 141

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML 536
            L + Q+     E +   L  N  ++ L+L  N LR                        
Sbjct: 142 DLSYNQLNDLAGETLGPALAENTGLTELNLSWNHLRGP---------------------- 179

Query: 537 FYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
                     GA  LA+  +  N  L  +D++ N   D GA ++ +ALKAN    +  LN
Sbjct: 180 ----------GAIALAKGLE-ANIFLKVLDISHNGFGDSGAASVGEALKANN--VLEELN 226

Query: 597 LANNFLTKFG 606
           + NN ++  G
Sbjct: 227 MRNNRISMTG 236



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 28/196 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S VD+S    G  GL  +  +L  N   +++    N +     +    +L  + +LK+L
Sbjct: 82  ISDVDLSDNQIGAAGLQAICAALALNPAVQKMQLGGNRLEEKAAQHLAALLLRHTSLKSL 141

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR------------------------ 259
           +LS N + D   + L   L +N G+  L LS   LR                        
Sbjct: 142 DLSYNQLNDLAGETLGPALAENTGLTELNLSWNHLRGPGAIALAKGLEANIFLKVLDISH 201

Query: 260 ----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
               D GA ++ E LK N++L  L + NN I  +G   L   L  N T+R L ++ N   
Sbjct: 202 NGFGDSGAASVGEALKANNVLEELNMRNNRISMTGALKLGLGLQVNQTLRILIISKNPIR 261

Query: 316 ALGANALAKGLEGNKS 331
           + G  +L K +  N+S
Sbjct: 262 SEGYVSLLKSVRNNRS 277



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  S+D+S     D     L  +L  N    E++ + N +   G  A    L++NI LK 
Sbjct: 137 SLKSLDLSYNQLNDLAGETLGPALAENTGLTELNLSWNHLRGPGAIALAKGLEANIFLKV 196

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L++S N  GD G   + + L  N  +E L + +  +   GA  +   L+ N  LR+L ++
Sbjct: 197 LDISHNGFGDSGAASVGEALKANNVLEELNMRNNRISMTGALKLGLGLQVNQTLRILIIS 256

Query: 283 NNMIDYSGFTSLAEALLENST 303
            N I   G+ SL +++  N +
Sbjct: 257 KNPIRSEGYVSLLKSVRNNRS 277


>gi|71422634|ref|XP_812195.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70876948|gb|EAN90344.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1079

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 178/401 (44%), Gaps = 75/401 (18%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           FGD+G+  LAE+L  N T   ++F  N IT+ G K     +  +++L+ +NL+GN I DE
Sbjct: 339 FGDKGVELLAEALRLNNTIRVIAFPNNNITSRGAKKLFQCIIQHVSLEEINLAGNRINDE 398

Query: 234 GVKCLCDILVDNAGVERLQLSS----VDLRDEGAKAIAELLKNNSILR--VLELNNN--- 284
               L + +  N  ++ + +++    +D  +E  + +  + ++  ++R  V+E+  N   
Sbjct: 399 AALSLLNTIRLNGNLKNINITNNFIGIDYINE-VEGLLLINQSPKMIRRLVVEIEANEPN 457

Query: 285 --MIDYSGFTS-----------LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
              +  SG T            L +ALL N+T+ SL L+ N  G +G  ++A+ L  N  
Sbjct: 458 LASLSLSGGTGEEYYNDASVRLLCQALLLNATVTSLDLSKNIVGDIGVASIAEMLMTNNV 517

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +  L+L  NSI + G + L   L +    L  LD+ NN+I  +G     E +K    L+ 
Sbjct: 518 ITHLNLSDNSISNRGPQRLCVALRTNTS-LQELDLSNNAIYDEGVEDFPEMLKYNDRLIR 576

Query: 392 INLYMNDIGDEGAEKIADALKQNR-----------------TITTID------------- 421
           I L    +  E   KI  A   N+                 T+  +D             
Sbjct: 577 IVLDKTGVSKEMYSKIIKAADLNKEPKNIKDLVYRLQSGDDTLRKVDLRRENCSRPLDDE 636

Query: 422 -------------------LGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAK 461
                              L GN I +KG  A+  +L +    I SL+L+ NP+  +G +
Sbjct: 637 SIGTLCVHLKGKSFVEGLLLQGNMIGTKGCQALGELLAEEGCGILSLNLSSNPVDDEGLQ 696

Query: 462 ALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
            LS+  L  H  + TL L   ++ ++G   + ++L+ N ++
Sbjct: 697 ELSKSFLSPHIKLETLVLSETEVTSAGINSLIELLKINTSL 737



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 211/512 (41%), Gaps = 91/512 (17%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S      +G   LA  L    T EEV    N I  AG +AF  +       K  ++ 
Sbjct: 48  IDLSRNEITSKGAMLLARFLRITPTVEEVEIRENNIDNAGAEAFIQLYFDVRYPKLFDMD 107

Query: 227 GNPI-----------------------------GDE----GVKC------LCDILVDNAG 247
           GNP                               DE    G+        L    V N G
Sbjct: 108 GNPCSKAYVHNLSLLAQGSSYSNEVRRGLLTREADELNVSGIDYNKLDPRLVTFYVQNVG 167

Query: 248 -VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA--LLENSTI 304
            +ERL LS   L D GA  I  L+ + S L  L+L+NN I   G +   E   L  + TI
Sbjct: 168 GLERLILSGCSLGDAGAGVIGALI-SQSTLTHLDLSNNGISDVGLSQFVEYSNLQNHPTI 226

Query: 305 RSLHLNGNYG-GALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSG---LSSRKG 359
            SL    N   G   A  L K L E N  +    L   S+    +R++++    L+ +  
Sbjct: 227 SSLSFAQNIRIGNFSAQNLTKTLFEKNGKITFFDLSETSVTSR-VRSIINHECELNKQPH 285

Query: 360 KL--AVLDIGNNSISA------------KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            L  AV+ I  N  S             K AF ++  +++  +LL +NL     GD+G E
Sbjct: 286 SLKEAVIGIRTNDPSCTSVNLQWEDDMEKAAFFISPILRDNTNLLELNLGNCGFGDKGVE 345

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A+AL+ N TI  I    NNI S+GA  + + +  +  +  ++LA N I  + A +L  
Sbjct: 346 LLAEALRLNNTIRVIAFPNNNITSRGAKKLFQCIIQHVSLEEINLAGNRINDEAALSLLN 405

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS-----ILDLRAN--GLRDEVCSG 518
            ++ +GN+  + +    IG      V  +L  N +       ++++ AN   L     SG
Sbjct: 406 TIRLNGNLKNINITNNFIGIDYINEVEGLLLINQSPKMIRRLVVEIEANEPNLASLSLSG 465

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
             G  +++ A                    + L Q+  ++N  +TS+DL+ N + D G  
Sbjct: 466 GTGEEYYNDA------------------SVRLLCQAL-LLNATVTSLDLSKNIVGDIGVA 506

Query: 579 AIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           +IA+ L  N    +T LNL++N ++  G   L
Sbjct: 507 SIAEMLMTNN--VITHLNLSDNSISNRGPQRL 536



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 159/397 (40%), Gaps = 69/397 (17%)

Query: 172  RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL-QSNIALKTLNLSGNPI 230
            R   DE +  L   L      E +    N I   G +A   +L +    + +LNLS NP+
Sbjct: 631  RPLDDESIGTLCVHLKGKSFVEGLLLQGNMIGTKGCQALGELLAEEGCGILSLNLSSNPV 690

Query: 231  GDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS--------------- 274
             DEG++ L    L  +  +E L LS  ++   G  ++ ELLK N+               
Sbjct: 691  DDEGLQELSKSFLSPHIKLETLVLSETEVTSAGINSLIELLKINTSLQQVFPPERVSADV 750

Query: 275  -------------------ILRVLELNNNMIDY-----------SGFTSLAEALLENSTI 304
                               +L  ++ N N+ +            S    L  +L++N+ I
Sbjct: 751  FCAMNYELMVNAQPKLLKPLLARIDANENIPEVVLKDSQVPFTDSACQLLCASLVKNTHI 810

Query: 305  RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             SL L+ N         L + L  + ++R + L  N IG +G   LM  L      L+ L
Sbjct: 811  VSLDLSHNRLTCECVPFLVEALSRSPAIRNVDLSYNHIGVKGGMDLMLFLQENDHVLS-L 869

Query: 365  DIGNNSISAKGAFHVAEY-------IKNCKSLL----------WINLYMND----IGDEG 403
            D+  N IS   A  + E        IK  + LL           INL   D    + D  
Sbjct: 870  DLKGNEISFATANAITELLSLNAGSIKLKRILLRHRSGNFYDEMINLNGQDETYKLNDND 929

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
               + D + ++ T+  +DLG N+I   G   IA VL+ N  I +L L YNPIG  G +AL
Sbjct: 930  IRLLCDVMTESSTLRAVDLGLNSITDLGCEMIADVLRQNQKIEALYLDYNPIGEAGGEAL 989

Query: 464  SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
               LK +  ++TL L    +     E +  +L  N T
Sbjct: 990  YNALKVNHQLHTLFLEGSNVPEEIWEEILGLLHVNET 1026



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 26/319 (8%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +A  G+  ++ +  ++NL      ++    +  IL DN  +  L L +    D+G + +A
Sbjct: 289 EAVIGIRTNDPSCTSVNLQWEDDMEKAAFFISPILRDNTNLLELNLGNCGFGDKGVELLA 348

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E L+ N+ +RV+   NN I   G   L + ++++ ++  ++L GN      A +L   + 
Sbjct: 349 EALRLNNTIRVIAFPNNNITSRGAKKLFQCIIQHVSLEEINLAGNRINDEAALSLLNTIR 408

Query: 328 GNKSLRELHLHGNSIGDEGIRA----LMSGLSSRKGKLAVLDIGNN-----SISAKGAFH 378
            N +L+ +++  N IG + I      L+   S +  +  V++I  N     S+S  G   
Sbjct: 409 LNGNLKNINITNNFIGIDYINEVEGLLLINQSPKMIRRLVVEIEANEPNLASLSLSGGTG 468

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
              Y                  D     +  AL  N T+T++DL  N +   G ++IA +
Sbjct: 469 EEYY-----------------NDASVRLLCQALLLNATVTSLDLSKNIVGDIGVASIAEM 511

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N+VIT L+L+ N I   G + L   L+ + ++  L L    I   G E   +ML+YN
Sbjct: 512 LMTNNVITHLNLSDNSISNRGPQRLCVALRTNTSLQELDLSNNAIYDEGVEDFPEMLKYN 571

Query: 499 NTISILDLRANGLRDEVCS 517
           + +  + L   G+  E+ S
Sbjct: 572 DRLIRIVLDKTGVSKEMYS 590



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 130/563 (23%), Positives = 221/563 (39%), Gaps = 101/563 (17%)

Query: 146 LFRESKQTLNEFAKELRA----FSSVDMSG----RNFGDEGLFFLAESLGYNQTAEEVSF 197
           L  +S + +     E+ A     +S+ +SG      + D  +  L ++L  N T   +  
Sbjct: 436 LINQSPKMIRRLVVEIEANEPNLASLSLSGGTGEEYYNDASVRLLCQALLLNATVTSLDL 495

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
           + N +   G+ +   +L +N  +  LNLS N I + G + LC  L  N  ++ L LS+  
Sbjct: 496 SKNIVGDIGVASIAEMLMTNNVITHLNLSDNSISNRGPQRLCVALRTNTSLQELDLSNNA 555

Query: 258 LRDEGAKAIAELLK-NNSILRVL--------ELNNNMI---------------------- 286
           + DEG +   E+LK N+ ++R++        E+ + +I                      
Sbjct: 556 IYDEGVEDFPEMLKYNDRLIRIVLDKTGVSKEMYSKIIKAADLNKEPKNIKDLVYRLQSG 615

Query: 287 ------------------DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-E 327
                             D     +L   L   S +  L L GN  G  G  AL + L E
Sbjct: 616 DDTLRKVDLRRENCSRPLDDESIGTLCVHLKGKSFVEGLLLQGNMIGTKGCQALGELLAE 675

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
               +  L+L  N + DEG++ L     S   KL  L +    +++ G   + E +K   
Sbjct: 676 EGCGILSLNLSSNPVDDEGLQELSKSFLSPHIKLETLVLSETEVTSAGINSLIELLKINT 735

Query: 388 SLLWI--------NLY--MN-DIGDEGAEKIADAL----KQNRTITTIDLGGNNIH--SK 430
           SL  +        +++  MN ++      K+   L      N  I  + L  + +     
Sbjct: 736 SLQQVFPPERVSADVFCAMNYELMVNAQPKLLKPLLARIDANENIPEVVLKDSQVPFTDS 795

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
               +   L  N+ I SLDL++N +  +    L E L     I  + L +  IG  G   
Sbjct: 796 ACQLLCASLVKNTHIVSLDLSHNRLTCECVPFLVEALSRSPAIRNVDLSYNHIGVKGGMD 855

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHML-------FYSLCIN 543
           +   L+ N+ +  LDL+ N +     +    L   ++    LK +L       FY   IN
Sbjct: 856 LMLFLQENDHVLSLDLKGNEISFATANAITELLSLNAGSIKLKRILLRHRSGNFYDEMIN 915

Query: 544 YLQGAKCLAQSFK-----------VVNEA--LTSIDLAFNEIRDDGAFAIAQALKANEDV 590
            L G     +++K           V+ E+  L ++DL  N I D G   IA  L+ N+  
Sbjct: 916 -LNGQD---ETYKLNDNDIRLLCDVMTESSTLRAVDLGLNSITDLGCEMIADVLRQNQ-- 969

Query: 591 AVTSLNLANNFLTKFGQSALTDA 613
            + +L L  N + + G  AL +A
Sbjct: 970 KIEALYLDYNPIGEAGGEALYNA 992



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 21/201 (10%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            S+D+S      E + FL E+L  +     V  + N I   G       LQ N  + +L+L
Sbjct: 812  SLDLSHNRLTCECVPFLVEALSRSPAIRNVDLSYNHIGVKGGMDLMLFLQENDHVLSLDL 871

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERL---------------------QLSSVDLRDEGAK 264
             GN I       + ++L  NAG  +L                     Q  +  L D   +
Sbjct: 872  KGNEISFATANAITELLSLNAGSIKLKRILLRHRSGNFYDEMINLNGQDETYKLNDNDIR 931

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
             + +++  +S LR ++L  N I   G   +A+ L +N  I +L+L+ N  G  G  AL  
Sbjct: 932  LLCDVMTESSTLRAVDLGLNSITDLGCEMIADVLRQNQKIEALYLDYNPIGEAGGEALYN 991

Query: 325  GLEGNKSLRELHLHGNSIGDE 345
             L+ N  L  L L G+++ +E
Sbjct: 992  ALKVNHQLHTLFLEGSNVPEE 1012



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 21/170 (12%)

Query: 163  AFSSVDMSGRNFGDEG----LFFLAES---LGYNQTAEEVSFA-ANGIT------AAGIK 208
            A  +VD+S  + G +G    + FL E+   L  +    E+SFA AN IT      A  IK
Sbjct: 837  AIRNVDLSYNHIGVKGGMDLMLFLQENDHVLSLDLKGNEISFATANAITELLSLNAGSIK 896

Query: 209  AFDGVLQS---NIALKTLNLSGN----PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
                +L+    N   + +NL+G      + D  ++ LCD++ +++ +  + L    + D 
Sbjct: 897  LKRILLRHRSGNFYDEMINLNGQDETYKLNDNDIRLLCDVMTESSTLRAVDLGLNSITDL 956

Query: 262  GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            G + IA++L+ N  +  L L+ N I  +G  +L  AL  N  + +L L G
Sbjct: 957  GCEMIADVLRQNQKIEALYLDYNPIGEAGGEALYNALKVNHQLHTLFLEG 1006



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 17/198 (8%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K  + +   G  +GD  +  L++ +      +  +D+  N I++KGA  +A +++   ++
Sbjct: 14  KGTKSVQWCGEKMGDAQLETLIAAMEISPIPIQHIDLSRNEITSKGAMLLARFLRITPTV 73

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN-----IH-----SKGASAIARVL 439
             + +  N+I + GAE         R     D+ GN      +H     ++G+S    V 
Sbjct: 74  EEVEIRENNIDNAGAEAFIQLYFDVRYPKLFDMDGNPCSKAYVHNLSLLAQGSSYSNEVR 133

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFH----GNINTLKLGWCQIGASGAEFVADML 495
           +   ++T      N  G D  K    ++ F+    G +  L L  C +G +GA  +  ++
Sbjct: 134 R--GLLTREADELNVSGIDYNKLDPRLVTFYVQNVGGLERLILSGCSLGDAGAGVIGALI 191

Query: 496 RYNNTISILDLRANGLRD 513
              +T++ LDL  NG+ D
Sbjct: 192 S-QSTLTHLDLSNNGISD 208


>gi|399498066|emb|CCG20361.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSENALGEKGVRAFGKLLQSQNNLEELFLMNDGISQEAANAVSELVPPTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSENALGEKGVRAFGKLLQSQNN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E +   + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPPTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 121/295 (41%), Gaps = 49/295 (16%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSENALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQNNLEELFLMNDGISQEAANAVSELVPPTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYL----QGAKCLAQSFK--------------------------- 556
                KH     + ++YL    +GA  +A + K                           
Sbjct: 352 -----KHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASAIASC 406

Query: 557 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 407 IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|147790061|emb|CAN75983.1| hypothetical protein VITISV_012187 [Vitis vinifera]
          Length = 539

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 138/280 (49%), Gaps = 1/280 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +  + N +   G++AF  +L+S  +L+ L L  + I +E  + +C+++     +  LQ  
Sbjct: 220 LDLSNNALGEKGVRAFGALLKSQSSLEELYLMNDGISEEAARAVCELIPSTEKLRVLQFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AI+E++K + +L     ++  I   G  +L+EAL   + ++ L L  N  
Sbjct: 280 NNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLRDNMF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L  +  L E +L   ++ DEG  A+ + L      L VL++  N I+A+
Sbjct: 340 GVEAGVALSKALAKHADLTEAYLSYLNLEDEGAVAIANVLKESASALEVLEMAGNDITAE 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            A  +A  I   + +  +NL  N++ DEGA +I+ AL+     +  +DL  N +   GA 
Sbjct: 400 AAPALAACIAAKQLITKLNLAENELRDEGAIQISKALEDGHAQLKEVDLSSNFMRRAGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            +AR +     +  L++  N I  +G   +  +     N+
Sbjct: 460 CLARAVVHKPGLKLLNINGNFISDEGIDEVKSIFNEFPNV 499



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 185/401 (46%), Gaps = 59/401 (14%)

Query: 143 TGKLFRESKQTLNEFAKELRAF--------------------SSVDMSGRNFG------- 175
           T K F E+ +T+ + +K  RAF                    + +  S R+FG       
Sbjct: 114 TSKTFNEACETVFDISKGQRAFVEAEEAEELLRPLKEPGNSYTKICFSNRSFGLGAARVA 173

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           +  L  L + L     ++ ++  + G     +  F   L+  + LK+L+LS N +G++GV
Sbjct: 174 EPILASLKDQLKEVDLSDFIAGRSEGEALEVMAIFSEALEGCV-LKSLDLSNNALGEKGV 232

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           +    +L   + +E L L +  + +E A+A+ EL+ +   LRVL+ +NNM    G  +++
Sbjct: 233 RAFGALLKSQSSLEELYLMNDGISEEAARAVCELIPSTEKLRVLQFHNNMTGDEGALAIS 292

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           E + ++  +     +    G+ G  AL++ L+   +L++L L  N  G E   AL   L 
Sbjct: 293 EVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLRDNMFGVEAGVALSKAL- 351

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                            AK A     Y+           Y+N + DEGA  IA+ LK++ 
Sbjct: 352 -----------------AKHADLTEAYLS----------YLN-LEDEGAVAIANVLKESA 383

Query: 416 T-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNI 473
           + +  +++ GN+I ++ A A+A  +    +IT L+LA N +  +GA  +S+ L+  H  +
Sbjct: 384 SALEVLEMAGNDITAEAAPALAACIAAKQLITKLNLAENELRDEGAIQISKALEDGHAQL 443

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             + L    +  +GA  +A  + +   + +L++  N + DE
Sbjct: 444 KEVDLSSNFMRRAGARCLARAVVHKPGLKLLNINGNFISDE 484



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 40/316 (12%)

Query: 314 GGALGANAL-AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           G AL   A+ ++ LEG   L+ L L  N++G++G+RA  + L S +  L  L + N+ IS
Sbjct: 199 GEALEVMAIFSEALEGC-VLKSLDLSNNALGEKGVRAFGALLKS-QSSLEELYLMNDGIS 256

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + A  V E I + + L  +  + N  GDEGA  I++ +KQ+  +         I S G 
Sbjct: 257 EEAARAVCELIPSTEKLRVLQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGG 316

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            A++  L+  + +  LDL  N  G +   ALS+ L  H ++    L +  +   GA  +A
Sbjct: 317 VALSEALQTFTNLKKLDLRDNMFGVEAGVALSKALAKHADLTEAYLSYLNLEDEGAVAIA 376

Query: 493 DMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
           ++L+ + + + +L++  N                                 +    A   
Sbjct: 377 NVLKESASALEVLEMAGN---------------------------------DITAEAAPA 403

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
             +     + +T ++LA NE+RD+GA  I++AL+ +    +  ++L++NF+ + G   L 
Sbjct: 404 LAACIAAKQLITKLNLAENELRDEGAIQISKALE-DGHAQLKEVDLSSNFMRRAGARCL- 461

Query: 612 DAKDLVYEMSEKEVNI 627
            A+ +V++   K +NI
Sbjct: 462 -ARAVVHKPGLKLLNI 476


>gi|399497966|emb|CCG20311.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKCSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKILNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K +  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKCSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKCSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 134/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKILNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKCSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A S K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|148702847|gb|EDL34794.1| leucine rich repeat containing 45, isoform CRA_b [Mus musculus]
          Length = 260

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 3/179 (1%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L++  L  E  +A+ +LL   ++L+ L L++ M+   G T L + L  N++++ L L 
Sbjct: 35  LDLTTQSLTVETCRALGKLLHKETLLKELVLSDCMLSEEGSTLLFQGLCANTSVQHLDLK 94

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIG--DEGIRALMSGLSSRKGKLAVLDIGN 368
           GN   A GA AL K L  NKS++ L L  N++G  ++       GL++    L  LD+ N
Sbjct: 95  GNNLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEDAFATFCGGLAANSA-LRQLDLRN 153

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           N IS KGA  +A  +K   +L  ++L  N+IG  G   + + L  NRT+  +DL GNNI
Sbjct: 154 NQISHKGAEELALALKGNTTLQQLDLRWNNIGLLGGRALVNCLPSNRTLWKLDLAGNNI 212



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 3/179 (1%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +      +T    +A   +L     LK L LS   + +EG   L   L  N  V+ L L 
Sbjct: 35  LDLTTQSLTVETCRALGKLLHKETLLKELVLSDCMLSEEGSTLLFQGLCANTSVQHLDLK 94

Query: 255 SVDLRDEGAKAIAELLKNNSILR--VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             +LR  GA+A+ +LL+ N  ++   LE NN       F +    L  NS +R L L  N
Sbjct: 95  GNNLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEDAFATFCGGLAANSALRQLDLRNN 154

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                GA  LA  L+GN +L++L L  N+IG  G RAL++ L S +  L  LD+  N+I
Sbjct: 155 QISHKGAEELALALKGNTTLQQLDLRWNNIGLLGGRALVNCLPSNR-TLWKLDLAGNNI 212



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 3/183 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L   S+  E  RAL   L  ++  L  L + +  +S +G+  + + +    S+  ++L
Sbjct: 35  LDLTTQSLTVETCRAL-GKLLHKETLLKELVLSDCMLSEEGSTLLFQGLCANTSVQHLDL 93

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS--KGASAIARVLKDNSVITSLDLAY 452
             N++   GAE +   L+QN++I ++ L  NN+ +     +     L  NS +  LDL  
Sbjct: 94  KGNNLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEDAFATFCGGLAANSALRQLDLRN 153

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   GA+ L+  LK +  +  L L W  IG  G   + + L  N T+  LDL  N + 
Sbjct: 154 NQISHKGAEELALALKGNTTLQQLDLRWNNIGLLGGRALVNCLPSNRTLWKLDLAGNNIP 213

Query: 513 DEV 515
            ++
Sbjct: 214 GDI 216



 Score = 42.4 bits (98), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 41/218 (18%)

Query: 401 DEGAEKIADALKQNRTITT--IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + GAE     L+Q   +    +DL   ++  +   A+ ++L   +++  L L+   +  +
Sbjct: 14  ESGAEPQEAVLQQLHQLPKGGLDLTTQSLTVETCRALGKLLHKETLLKELVLSDCMLSEE 73

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL---RDEV 515
           G+  L + L  + ++  L L    + A+GAE +  +LR N +I  L L  N L    D  
Sbjct: 74  GSTLLFQGLCANTSVQHLDLKGNNLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEDAF 133

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDD 575
            + C GL+                                   N AL  +DL  N+I   
Sbjct: 134 ATFCGGLA----------------------------------ANSALRQLDLRNNQISHK 159

Query: 576 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           GA  +A ALK N    +  L+L  N +   G  AL + 
Sbjct: 160 GAEELALALKGN--TTLQQLDLRWNNIGLLGGRALVNC 195


>gi|345793929|ref|XP_544412.3| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Canis lupus familiaris]
          Length = 1092

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 114/223 (51%), Gaps = 10/223 (4%)

Query: 335  LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
            L L  NS+GD G+  L+  LS  K     L + +N+IS +G   + E+  +C+ L  + L
Sbjct: 847  LQLDHNSVGDIGVEQLLPCLSVCKA----LYLRDNNISDRGICKLIEHALHCEQLQKLAL 902

Query: 395  YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            + N + D  A  +A  L   +    + LG N I + GA A+A  L+ N+ +  L    N 
Sbjct: 903  FNNKLTDGCAHSMARLLACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQFLGFWGNK 962

Query: 455  IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +G +GA+AL+E L  H ++  L L    IG+ GA  +A ML  N  +  L L  N L+DE
Sbjct: 963  VGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCLEENHLQDE 1022

Query: 515  -VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
             VCS   GL        SLK +   + CI YL GA+ L Q+ +
Sbjct: 1023 GVCSLAKGL----ERNSSLKVLKLSNNCITYL-GAEGLLQALE 1060



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L++N +   G   L   L   S  ++L
Sbjct: 816  VGHLKLTFCGVGPPECAALAFVLRHLRRPVALQLDHNSVGDIGVEQLLPCL---SVCKAL 872

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D G    M+ L + K     L +G
Sbjct: 873  YLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTD-GCAHSMARLLACKQNFLALRLG 931

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GN+I
Sbjct: 932  NNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDI 991

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L+ N  +  L L  N +  +G  +L++ L+ + ++  LKL    I   G
Sbjct: 992  GSVGARALALMLEKNVALEELCLEENHLQDEGVCSLAKGLERNSSLKVLKLSNNCITYLG 1051

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1052 AEGLLQALEKNDTILEVWLRGN 1073



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 88/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A  L   Q    +    N ITAAG +A    L++N +L+ L   GN +GDEG + L + 
Sbjct: 915  MARLLACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEA 974

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   D+   GA+A+A +L+ N  L  L L  N +   G  SLA+ L  N
Sbjct: 975  LGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCLEENHLQDEGVCSLAKGLERN 1034

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA  L + LE N ++ E+ L GN+   E +  L
Sbjct: 1035 SSLKVLKLSNNCITYLGAEGLLQALEKNDTILEVWLRGNTFSLEEMERL 1083



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 103/207 (49%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A LL        L 
Sbjct: 870  KALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSMARLLACKQNFLALR 929

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G  +LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 930  LGNNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLSLVGN 989

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IG  G RAL   L  +   L  L +  N +  +G   +A+ ++   SL  + L  N I 
Sbjct: 990  DIGSVGARALALML-EKNVALEELCLEENHLQDEGVCSLAKGLERNSSLKVLKLSNNCIT 1048

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 1049 YLGAEGLLQALEKNDTILEVWLRGNTF 1075



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 6/252 (2%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI-KAFDGVLQSN 217
            + LR   ++ +   + GD G+  L   L      + +    N I+  GI K  +  L   
Sbjct: 839  RHLRRPVALQLDHNSVGDIGVEQLLPCLS---VCKALYLRDNNISDRGICKLIEHALHCE 895

Query: 218  IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L+ L L  N + D     +  +L        L+L +  +   GA+A+AE L+ N+ L+
Sbjct: 896  -QLQKLALFNNKLTDGCAHSMARLLACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQ 954

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L    N +   G  +LAEAL ++ ++R L L GN  G++GA ALA  LE N +L EL L
Sbjct: 955  FLGFWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCL 1014

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              N + DEG+ +L  GL  R   L VL + NN I+  GA  + + ++   ++L + L  N
Sbjct: 1015 EENHLQDEGVCSLAKGL-ERNSSLKVLKLSNNCITYLGAEGLLQALEKNDTILEVWLRGN 1073

Query: 398  DIGDEGAEKIAD 409
                E  E+++ 
Sbjct: 1074 TFSLEEMERLSQ 1085


>gi|431909151|gb|ELK12741.1| Leucine-rich repeat-containing protein 68 [Pteropus alecto]
          Length = 630

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 29/335 (8%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL   + + L E  K L+ F  VD+   N  ++G   L + + Y ++A  ++ ++N    
Sbjct: 63  KLDYRACEALEEVFKRLQ-FKVVDLEQTNLDEDGASALFDMIEYYESATHLNISSN---- 117

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                                    IG  G +    ++   + ++ L   S  L D  A 
Sbjct: 118 -----------------------KHIGTRGWQAAAHMMRKTSCLQYLDARSTPLLDHSAP 154

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA-LA 323
            +A  L+  S L VL L N  +       LA AL  N  +R L+L  N    L  +A L 
Sbjct: 155 FVARALRIRSSLTVLHLENASLSGRPLMLLATALKMNMNLRELYLADNKLNGLQDSAQLG 214

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ N SL+ L L  N + D G+  +  GL  ++  LA L + NN ++  G   +   +
Sbjct: 215 NLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQRKGLATLVLWNNQLTHTGMAFLGMTL 274

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            + +SL  +NL  N +G+EG   + + L  NR++  + L    +  +GA A+A  + ++ 
Sbjct: 275 PHTQSLETLNLGHNPVGNEGVRNLKNGLIGNRSVLRLGLASTKLTCEGAVAVAEFIAESP 334

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  LDL  N I   G  ALS  LK + ++  L L
Sbjct: 335 RLLRLDLRENEIKTGGLMALSLALKVNHSLLRLDL 369



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 4/292 (1%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS-VDLRDEGAKAIAELLKNNSIL 276
           +  K ++L    + ++G   L D++        L +SS   +   G +A A +++  S L
Sbjct: 79  LQFKVVDLEQTNLDEDGASALFDMIEYYESATHLNISSNKHIGTRGWQAAAHMMRKTSCL 138

Query: 277 RVLELNNN-MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+  +  ++D+S    +A AL   S++  LHL            LA  L+ N +LREL
Sbjct: 139 QYLDARSTPLLDHSA-PFVARALRIRSSLTVLHLENASLSGRPLMLLATALKMNMNLREL 197

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC-KSLLWINL 394
           +L  N +      A +  L      L +LD+ NN +   G  ++ E +K   K L  + L
Sbjct: 198 YLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQRKGLATLVL 257

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N +   G   +   L   +++ T++LG N + ++G   +   L  N  +  L LA   
Sbjct: 258 WNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPVGNEGVRNLKNGLIGNRSVLRLGLASTK 317

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +  +GA A++E +     +  L L   +I   G   ++  L+ N+++  LDL
Sbjct: 318 LTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALKVNHSLLRLDL 369



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 1/145 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D+   +  D GL ++ E L   +     +    N +T  G+      L    +L+TLNL
Sbjct: 226 LDLRNNHVLDSGLAYICEGLKEQRKGLATLVLWNNQLTHTGMAFLGMTLPHTQSLETLNL 285

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             NP+G+EGV+ L + L+ N  V RL L+S  L  EGA A+AE +  +  L  L+L  N 
Sbjct: 286 GHNPVGNEGVRNLKNGLIGNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENE 345

Query: 286 IDYSGFTSLAEALLENSTIRSLHLN 310
           I   G  +L+ AL  N ++  L L+
Sbjct: 346 IKTGGLMALSLALKVNHSLLRLDLD 370



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 14/317 (4%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L    +DY    +L E + +    + + L        GA+AL   +E  +S   L++ 
Sbjct: 57  LDLKGEKLDYRACEALEE-VFKRLQFKVVDLEQTNLDEDGASALFDMIEYYESATHLNIS 115

Query: 339 GNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            N  IG  G +A  + +  +   L  LD  +  +    A  VA  ++   SL  ++L   
Sbjct: 116 SNKHIGTRGWQA-AAHMMRKTSCLQYLDARSTPLLDHSAPFVARALRIRSSLTVLHLENA 174

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-IARVLKDNSVITSLDLAYNPIG 456
            +       +A ALK N  +  + L  N ++    SA +  +LK N  +  LDL  N + 
Sbjct: 175 SLSGRPLMLLATALKMNMNLRELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVL 234

Query: 457 ADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
             G   + E LK     + TL L   Q+  +G  F+   L +  ++  L+L  N + +E 
Sbjct: 235 DSGLAYICEGLKEQRKGLATLVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPVGNE- 293

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                G+    + +   + +L   L    L  +GA  +A+ F   +  L  +DL  NEI+
Sbjct: 294 -----GVRNLKNGLIGNRSVLRLGLASTKLTCEGAVAVAE-FIAESPRLLRLDLRENEIK 347

Query: 574 DDGAFAIAQALKANEDV 590
             G  A++ ALK N  +
Sbjct: 348 TGGLMALSLALKVNHSL 364


>gi|212274827|ref|NP_001130411.1| uncharacterized protein LOC100191507 [Zea mays]
 gi|194689052|gb|ACF78610.1| unknown [Zea mays]
 gi|194702204|gb|ACF85186.1| unknown [Zea mays]
 gi|413923081|gb|AFW63013.1| putative RAN GTPase activating family protein [Zea mays]
          Length = 541

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 214/495 (43%), Gaps = 70/495 (14%)

Query: 34  PLSFAL---PFSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIAS 90
           P +F++   P S + R   + R+    +      R+ R + +Q   +NA T   ++++  
Sbjct: 9   PRTFSIKLWPPSESTRIMLVDRMTNNLSTESIFSRKYRLLGKQEAHENAKT---IEELCF 65

Query: 91  FVV-------PAGVFVSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFT 143
            +        P G   SA  +  K   K+++    +  + TAE +   V A T L+S  T
Sbjct: 66  ALADEHFREEPDGDGSSAVQLYAKETSKMMLEVLKKGPRTTAE-LEAPV-ADTPLVSADT 123

Query: 144 ------GKLF----RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFF---LAESLGYNQ 190
                 GK       E+K+ L+   K   ++  +  S R+FG         + ES+    
Sbjct: 124 VLDISGGKRAFIEADEAKELLSPLTKPGNSYKRICFSNRSFGIGAANVAGPILESVKNQL 183

Query: 191 TAEEVS-FAANGITAAGI-------KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           T  ++S F A       +       KA DG +     L+ LN+S N +G++GV+   ++L
Sbjct: 184 TEVDISDFVAGRSEDEALDVMRIFSKALDGSV-----LRYLNISDNALGEKGVRAFSELL 238

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM----------------- 285
                +E L + +  + +E AKA++EL+     L+VL  +NNM                 
Sbjct: 239 KSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSP 298

Query: 286 -----------IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
                      I   G  +L+EAL   + ++ L L  N  G     AL++ L     L E
Sbjct: 299 NVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSETLPKLPDLVE 358

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L   ++ ++G  A+   L     +L VL+I  N I+AK A  +AE +   +SL  + L
Sbjct: 359 LYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPDLAECLAVMQSLKKLTL 418

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N++ D GA  IA +L+   + +  +D+  N +   GA    R + +      L++  N
Sbjct: 419 AENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGARCFTRAVANKPDFVQLNINGN 478

Query: 454 PIGADGAKALSEVLK 468
            I  +G   + E+LK
Sbjct: 479 FISDEGVDEVKEILK 493



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 37/293 (12%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K L+G+  LR L++  N++G++G+RA    L S++  L  L + N+ IS + A  ++E
Sbjct: 207 FSKALDGS-VLRYLNISDNALGEKGVRAFSELLKSQES-LEELYVMNDGISEEAAKALSE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I   + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A++  L  
Sbjct: 265 LIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGT 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN-T 500
            + +  LDL  N  G D   ALSE L    ++  L L    +   G   +A  L+ +   
Sbjct: 325 CTRLKKLDLRDNLFGVDAGLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQ 384

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           + +L++  N +  +                                 A+CLA     V +
Sbjct: 385 LEVLEIAGNEINAKAAPDL----------------------------AECLA-----VMQ 411

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +L  + LA NE++D+GA  IA++L+      +  L+++ N L + G    T A
Sbjct: 412 SLKKLTLAENELKDNGAVIIAKSLEDGHS-DLKELDVSTNMLQRVGARCFTRA 463



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 30/220 (13%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG  ++AE +  +   E    +A  I + G  A    L +   LK L+L  N  G + 
Sbjct: 283 GDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDA 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L + L     +  L LS ++L ++G  AIA+ LK +++ L VLE+  N I+      
Sbjct: 343 GLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPD 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLREL----------------- 335
           LAE L    +++ L L  N     GA  +AK LE G+  L+EL                 
Sbjct: 403 LAECLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGARCFTR 462

Query: 336 -----------HLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                      +++GN I DEG+  +   L + K  L VL
Sbjct: 463 AVANKPDFVQLNINGNFISDEGVDEVKEILKAGKKSLDVL 502


>gi|410982796|ref|XP_003997734.1| PREDICTED: protein phosphatase 1 regulatory subunit 37 [Felis
           catus]
          Length = 440

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 146/335 (43%), Gaps = 29/335 (8%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  ++ + L E  K L+ F  VD+   N  ++G   L + + Y ++A  ++ + N    
Sbjct: 98  KLDYKTCEALEEVFKRLQ-FKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFN---- 152

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                                    IG  G +    ++   + ++ L   +  L D  A 
Sbjct: 153 -----------------------KHIGTRGWQAAAHMMRKTSCLQYLDARNTPLLDHSAP 189

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA-LA 323
            +A  L+  S L VL L N  +       LA AL  N  +R L+L  N    L  +A L 
Sbjct: 190 FVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNVNLRELYLADNKLNGLQDSAQLG 249

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ N SL+ L L  N + D G+  +  GL  +K  L  L + NN ++  G   +   +
Sbjct: 250 NLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQKKGLETLVLWNNQLTHTGMAFLGMTL 309

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            + +SL  +NL  N IG+EG   + + L  NR++  + L    +  +GA A+A  + ++ 
Sbjct: 310 PHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLTATKLTCEGAVAVAEFIAESP 369

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  LDL  N I   G  ALS  LK + ++  L L
Sbjct: 370 RLLRLDLRENEIKTGGLMALSLALKVNRSLLRLDL 404



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 1/145 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D+   +  D GL ++ E L   +   E +    N +T  G+      L    +L+TLNL
Sbjct: 261 LDLRNNHVLDSGLAYICEGLKEQKKGLETLVLWNNQLTHTGMAFLGMTLPHTQSLETLNL 320

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             NPIG+EGV+ L + L+ N  V RL L++  L  EGA A+AE +  +  L  L+L  N 
Sbjct: 321 GHNPIGNEGVRNLKNGLISNRSVLRLGLTATKLTCEGAVAVAEFIAESPRLLRLDLRENE 380

Query: 286 IDYSGFTSLAEALLENSTIRSLHLN 310
           I   G  +L+ AL  N ++  L L+
Sbjct: 381 IKTGGLMALSLALKVNRSLLRLDLD 405



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 4/292 (1%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS-SVDLRDEGAKAIAELLKNNSIL 276
           +  K ++L    + ++G   L D++        L +S +  +   G +A A +++  S L
Sbjct: 114 LQFKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAHMMRKTSCL 173

Query: 277 RVLELNNN-MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+  N  ++D+S    +A AL   S++  LHL            LA  L+ N +LREL
Sbjct: 174 QYLDARNTPLLDHSA-PFVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNVNLREL 232

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINL 394
           +L  N +      A +  L      L +LD+ NN +   G  ++ E +K  K  L  + L
Sbjct: 233 YLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQKKGLETLVL 292

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N +   G   +   L   +++ T++LG N I ++G   +   L  N  +  L L    
Sbjct: 293 WNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLTATK 352

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +  +GA A++E +     +  L L   +I   G   ++  L+ N ++  LDL
Sbjct: 353 LTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALKVNRSLLRLDL 404



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 14/317 (4%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L    +DY    +L E + +    + + L        GA+AL   +E  +S   L++ 
Sbjct: 92  LDLKGEKLDYKTCEALEE-VFKRLQFKVVDLEQTNLDEDGASALFDMIEYYESATHLNIS 150

Query: 339 GNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            N  IG  G +A  + +  +   L  LD  N  +    A  VA  ++   SL  ++L   
Sbjct: 151 FNKHIGTRGWQA-AAHMMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLENA 209

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-IARVLKDNSVITSLDLAYNPIG 456
            +       +A ALK N  +  + L  N ++    SA +  +LK N  +  LDL  N + 
Sbjct: 210 SLSGRPLMLLATALKMNVNLRELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVL 269

Query: 457 ADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
             G   + E LK     + TL L   Q+  +G  F+   L +  ++  L+L  N + +E 
Sbjct: 270 DSGLAYICEGLKEQKKGLETLVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNE- 328

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                G+    + + S + +L   L    L  +GA  +A+ F   +  L  +DL  NEI+
Sbjct: 329 -----GVRNLKNGLISNRSVLRLGLTATKLTCEGAVAVAE-FIAESPRLLRLDLRENEIK 382

Query: 574 DDGAFAIAQALKANEDV 590
             G  A++ ALK N  +
Sbjct: 383 TGGLMALSLALKVNRSL 399


>gi|426382277|ref|XP_004057734.1| PREDICTED: protein NLRC5 [Gorilla gorilla gorilla]
          Length = 1866

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 137/315 (43%), Gaps = 31/315 (9%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLARLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DE--------------------------GAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            D                           GA  +A AL  +  +  I L  NN+    A  
Sbjct: 1676 DPTALGLAQELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNL----AGG 1731

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            + R  K+  ++  +DL    I    AK L+        +  + L W  +G   A  +A +
Sbjct: 1732 VLRFCKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQV 1791

Query: 495  LRYNNTISILDLRAN 509
            L     +  +DL  N
Sbjct: 1792 LPQMGRLKRVDLEKN 1806



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 131/297 (44%), Gaps = 7/297 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+S        L  L   L +    + +    N I   G       L++  +L+ L+LS
Sbjct: 1555 LDLSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLS 1614

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD GV+ L  IL     + ++ LS   +   G   +AE L     L  L L  N +
Sbjct: 1615 HNQIGDAGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNAL 1674

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                   LA+ L ++  +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    
Sbjct: 1675 GDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGV 1732

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +R            L  +D+ +  I  + A  +     +C +L  I L  N +GDE A +
Sbjct: 1733 LR-----FCKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAE 1787

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            +A  L Q   +  +DL  N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1788 LAQVLPQMGRLKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1844



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 159/393 (40%), Gaps = 43/393 (10%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMI--DYSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + L+ L L+  N+   D +    L   LL 
Sbjct: 1433 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 1492

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----- 355
             S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L      
Sbjct: 1493 LSELKTFRLTSSCVSTEGLARLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML 1552

Query: 356  ----------------------SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                                  S    L  L +  NSI   G  H++E ++   SL  ++
Sbjct: 1553 KRLDLSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELD 1612

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N IGD G + +A  L     +  IDL  N+I S G   +A  L     +  L L  N
Sbjct: 1613 LSHNQIGDAGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCN 1672

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             +G   A  L++ L  H  +  L L +  +G  GA  +A  L  +  +  + L  N L  
Sbjct: 1673 ALGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAG 1730

Query: 514  EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
             V   C  L         L+ +   S  I+  Q AK L  SF     AL  I L++N + 
Sbjct: 1731 GVLRFCKELPL-------LRQIDLVSCKIDN-QTAKLLTSSFTSC-PALEVILLSWNLLG 1781

Query: 574  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
            D+ A  +AQ L   +   +  ++L  N +T  G
Sbjct: 1782 DEAAAELAQVLP--QMGRLKRVDLEKNQITALG 1812



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 10/255 (3%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G   +A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 1501 LTSSCVSTEGLARLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 1560

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 1561 LLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 1620

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
            +G + +A +L     +  +DL  N +     S   G+    S +   + +    L  N L
Sbjct: 1621 AGVQHLATILPGLPELRKIDLSVNSI-----SSAGGVQLAESLVLC-RRLEELMLGCNAL 1674

Query: 546  QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFL 602
                 L  + + + + L  + L F+ +   GA ++AQAL  +   E++++   NLA   L
Sbjct: 1675 GDPTALGLA-QELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVL 1733

Query: 603  TKFGQSALTDAKDLV 617
                +  L    DLV
Sbjct: 1734 RFCKELPLLRQIDLV 1748



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 27/233 (11%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R   ++ ++ G        + L G   +  L       GD    AL   L +  G+L +L
Sbjct: 661 REAPIHLDFDGCPLEPHCPEALVGCGQIENLSFKSRKCGDAFAEALSRSLPT-MGRLQML 719

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  + I+A+G  H+ + +  C  L  ++   N + D+    I + L     +  +DL  
Sbjct: 720 GLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSS 779

Query: 425 NNIHSKGASAIARV-------------------LKDNSVITSLDLAYNP--IGADGAKAL 463
           N+I       +ARV                   L      T+ +L   P    +DG +  
Sbjct: 780 NSICVSTLLCLARVAVTCPTVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKG 839

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
           ++         TL+L  CQ+    AE +  +L+    +  +DL  N L DE C
Sbjct: 840 AQSRSL-----TLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGC 887



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 91/232 (39%), Gaps = 19/232 (8%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      +EVSF  N ++   +     VL     L+ L+LS N
Sbjct: 721 LAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSN 780

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNM 285
            I    + CL  + V    V  LQ    DL        +  AEL       R  +L  + 
Sbjct: 781 SICVSTLLCLARVAVTCPTVRMLQAREADLIFLLSPPTETTAELQ------RAPDLQESD 834

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  S +  L        +H          A AL   L+    L E+ L GN + DE
Sbjct: 835 GQRKGAQSRSLTLRLQKCQLQVH---------DAEALIALLQEGPHLEEVDLSGNQLEDE 885

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           G R LM+  +S+      LD+ +N +S  G   V   +  C +L  +++ + 
Sbjct: 886 GCR-LMAEAASQLHITRKLDLSDNGLSVAGVHCVLRAMSACWTLAELHISLQ 936



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 33/286 (11%)

Query: 210  FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            F G  Q  I  ++L LS  P+    +  LC  L D  G   LQLS   L D+  + + + 
Sbjct: 1100 FLGFRQRCIP-RSLCLSECPLEPPSLTRLCATLKDCPGPLELQLSCKFLSDQSLETLLDC 1158

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEAL-----LENSTIRS-----LHLNGN------Y 313
            L     L +L+L+   +       LA  L     ++   +RS     LH   N       
Sbjct: 1159 LPQLPQLSLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLNHATLHFRSNEEEEGVC 1218

Query: 314  GGALGANALAKG--------LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
             G     +L++         L   K L ++ L  N +GD G+R L+  L        +LD
Sbjct: 1219 CGRFTGCSLSQEHVESFCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GLLD 1277

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + +NS+S + A ++ E + +C  +   ++   ++G E + +I  + ++++   T+ L   
Sbjct: 1278 LSHNSVSQESALYLVETLPSCPRVREASV---NLGSEQSFRIHFS-REDQAGKTLRLSEC 1333

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
            +   +  S +A  L  +  +T L L    +   G K L+ +L+  G
Sbjct: 1334 SFQPEHVSRLATGLSQSLQLTELTLTQCCL---GQKQLAILLRLVG 1376


>gi|399498050|emb|CCG20353.1| Ran GTPase activating protein 2 [Solanum tarijense]
          Length = 553

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      +AVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 149/305 (48%), Gaps = 15/305 (4%)

Query: 312 NYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N   AL   N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ 
Sbjct: 196 NEAAALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDG 253

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS + A  V+E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+
Sbjct: 254 ISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSE 313

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G S +   L   S +  LDL  N  G +    L + L  H N+  + L +  +   GA  
Sbjct: 314 GGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIA 373

Query: 491 VADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QG 547
           +A+ L+ +  ++++L++  N +  E  S           +  L      SL  N L  +G
Sbjct: 374 IANALKDSAPSVAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEG 427

Query: 548 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 607
           A  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G 
Sbjct: 428 AIQIAKALE-GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGV 484

Query: 608 SALTD 612
             L +
Sbjct: 485 DELKE 489



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG F +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  + VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 122/295 (41%), Gaps = 49/295 (16%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N  +A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAAALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYL----QGAKCLAQSFK--------------------------- 556
                KH     + ++YL    +GA  +A + K                           
Sbjct: 352 -----KHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVLEMAGNDITAEAASAIASC 406

Query: 557 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               + L  + L  NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 407 IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|300798702|ref|NP_001178571.1| NACHT, LRR and PYD domains-containing protein 3 [Rattus norvegicus]
          Length = 1035

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 127/256 (49%), Gaps = 3/256 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           ++ + +D+S    GD G+  L E+L +     + +     G+T         VL S+  L
Sbjct: 740 QSLTELDLSDNTLGDPGMRVLCEALQHPGCNIQRLWLGRCGLTHQCCFNISSVLSSSQKL 799

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+LS N +GD GV+ LC  L      +++L L S  L     + +A +L +N  L  L
Sbjct: 800 VELDLSDNALGDFGVRLLCVGLKHLLCNLQKLWLVSCCLTSACCQDLALVLSSNHSLTRL 859

Query: 280 ELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +  N +  SG   L E + +    ++ L L  +   +L  +AL   L+ N++L  L+L 
Sbjct: 860 YIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSLCCSALTSVLKTNQNLTHLYLR 919

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N++GD G++ L  GL     KL +L++ N S+++   + ++  + + +SL  +NL  ND
Sbjct: 920 SNALGDMGLKLLCEGLLHPDCKLQMLELDNCSLTSHSCWDLSTILTHNQSLRKLNLSNND 979

Query: 399 IGDEGAEKIADALKQN 414
           +GD     + + LKQ 
Sbjct: 980 LGDLCVVTLCEVLKQQ 995



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 8/284 (2%)

Query: 202  ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRD 260
            +T++  +     L +N +L  L+LS N +GD G++ LC+ L      ++RL L    L  
Sbjct: 724  LTSSFCRGLFSSLSTNQSLTELDLSDNTLGDPGMRVLCEALQHPGCNIQRLWLGRCGLTH 783

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA---EALLENSTIRSLHLNGNYGGAL 317
            +    I+ +L ++  L  L+L++N +   G   L    + LL N  ++ L L      + 
Sbjct: 784  QCCFNISSVLSSSQKLVELDLSDNALGDFGVRLLCVGLKHLLCN--LQKLWLVSCCLTSA 841

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
                LA  L  N SL  L++  N++GD G++ L   +   +  L  L + N+ +++    
Sbjct: 842  CCQDLALVLSSNHSLTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSLCCS 901

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIA 436
             +   +K  ++L  + L  N +GD G + + +  L  +  +  ++L   ++ S     ++
Sbjct: 902  ALTSVLKTNQNLTHLYLRSNALGDMGLKLLCEGLLHPDCKLQMLELDNCSLTSHSCWDLS 961

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLG 479
             +L  N  +  L+L+ N +G      L EVLK  G  + +L+LG
Sbjct: 962  TILTHNQSLRKLNLSNNDLGDLCVVTLCEVLKQQGCLLQSLQLG 1005



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 25/317 (7%)

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
               L   L  N+SL EL L  N++GD G+R L   L      +  L +G   ++ +  F+
Sbjct: 729  CRGLFSSLSTNQSLTELDLSDNTLGDPGMRVLCEALQHPGCNIQRLWLGRCGLTHQCCFN 788

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
            ++  + + + L+ ++L  N +GD G   +   LK     +  + L    + S     +A 
Sbjct: 789  ISSVLSSSQKLVELDLSDNALGDFGVRLLCVGLKHLLCNLQKLWLVSCCLTSACCQDLAL 848

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG--AEFVADML 495
            VL  N  +T L +  N +G  G + L E +K     N  KLG    G +      +  +L
Sbjct: 849  VLSSNHSLTRLYIGENALGDSGVQVLCEKMK-DPQCNLQKLGLVNSGLTSLCCSALTSVL 907

Query: 496  RYNNTISILDLRANGLRDEVCSG----CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
            + N  ++ L LR+N L D    G    C GL      +     ML    C   L    C 
Sbjct: 908  KTNQNLTHLYLRSNALGD---MGLKLLCEGLLHPDCKL----QMLELDNC--SLTSHSCW 958

Query: 552  AQSFKVV-NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL---TKFGQ 607
              S  +  N++L  ++L+ N++ D     + + LK  +   + SL L   +L   TK   
Sbjct: 959  DLSTILTHNQSLRKLNLSNNDLGDLCVVTLCEVLK-QQGCLLQSLQLGEMYLNCETKRTL 1017

Query: 608  SALTDAKD---LVYEMS 621
             AL + K    +V+E+S
Sbjct: 1018 EALQEEKPELTVVFEIS 1034


>gi|399497900|emb|CCG20278.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|431902962|gb|ELK09144.1| NACHT, LRR and PYD domains-containing protein 5 [Pteropus alecto]
          Length = 1204

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 4/302 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            + + G +  DE +    E+L + +   + +     G+T     A   +L ++  LK+L+L
Sbjct: 846  LSLEGTHLKDEDIGIAYEALRHPRCLLQSLRLDHCGLTHTCCLAISKILVTSTCLKSLSL 905

Query: 226  SGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             GN + ++G+  LCD L V    +++L L + DL     + +A  L  N  L  L L+ N
Sbjct: 906  VGNKVTNQGITLLCDALKVSQCTLKKLILGNCDLSAASCQDLAMALIGNQSLTHLYLSTN 965

Query: 285  MIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +   G   L  AL L +  ++ L LN       G   LA  L GN+ L  L L  N +G
Sbjct: 966  SLGSEGVNLLCRALKLFSCALQRLILNECNVDVAGCGFLALALTGNQHLTHLSLSMNPLG 1025

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G+  L   ++     L  L++    ++A    +V+  I   K L  ++L  N +GD G
Sbjct: 1026 DNGMNLLCEVMAEPSCHLQDLELVQCHLTAACCKNVSYMITRSKHLRSLDLAANALGDSG 1085

Query: 404  AEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              ++ + LKQ + ++  + L   ++ S     ++  L  N  + SL+L  N    +G   
Sbjct: 1086 MAELCEGLKQRKSSLRRLGLEACDLTSDCCEGLSLALSCNQCLISLNLMRNNFSPEGMMK 1145

Query: 463  LS 464
            L 
Sbjct: 1146 LC 1147



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 19/319 (5%)

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDIL------VDNAGVERLQLSSVDLRDEGAKAI 266
            +L ++ +L+ L+LSG+ + +  +K LC  L      + N   +R+Q++       G   +
Sbjct: 780  MLGTHPSLQELDLSGSILNEWAMKTLCIKLRQPTCKIQNLIFKRVQITF------GLHYL 833

Query: 267  AELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKG 325
               +  N  ++ L L    +         EAL      ++SL L+          A++K 
Sbjct: 834  WNTIVTNCNVKYLSLEGTHLKDEDIGIAYEALRHPRCLLQSLRLDHCGLTHTCCLAISKI 893

Query: 326  LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            L  +  L+ L L GN + ++GI  L   L   +  L  L +GN  +SA     +A  +  
Sbjct: 894  LVTSTCLKSLSLVGNKVTNQGITLLCDALKVSQCTLKKLILGNCDLSAASCQDLAMALIG 953

Query: 386  CKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             +SL  + L  N +G EG   +  ALK  +  +  + L   N+   G   +A  L  N  
Sbjct: 954  NQSLTHLYLSTNSLGSEGVNLLCRALKLFSCALQRLILNECNVDVAGCGFLALALTGNQH 1013

Query: 445  ITSLDLAYNPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +T L L+ NP+G +G   L EV+ +   ++  L+L  C + A+  + V+ M+  +  +  
Sbjct: 1014 LTHLSLSMNPLGDNGMNLLCEVMAEPSCHLQDLELVQCHLTAACCKNVSYMITRSKHLRS 1073

Query: 504  LDLRANGLRD----EVCSG 518
            LDL AN L D    E+C G
Sbjct: 1074 LDLAANALGDSGMAELCEG 1092



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 12/333 (3%)

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGA 316
            L D   + +  +L  +  L+ L+L+ ++++     +L   L + +  I++L +       
Sbjct: 769  LVDNWWENLCFMLGTHPSLQELDLSGSILNEWAMKTLCIKLRQPTCKIQNL-IFKRVQIT 827

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             G + L   +  N +++ L L G  + DE I      L   +  L  L + +  ++    
Sbjct: 828  FGLHYLWNTIVTNCNVKYLSLEGTHLKDEDIGIAYEALRHPRCLLQSLRLDHCGLTHTCC 887

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAI 435
              +++ +     L  ++L  N + ++G   + DALK ++ T+  + LG  ++ +     +
Sbjct: 888  LAISKILVTSTCLKSLSLVGNKVTNQGITLLCDALKVSQCTLKKLILGNCDLSAASCQDL 947

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADM 494
            A  L  N  +T L L+ N +G++G   L   LK F   +  L L  C +  +G  F+A  
Sbjct: 948  AMALIGNQSLTHLYLSTNSLGSEGVNLLCRALKLFSCALQRLILNECNVDVAGCGFLALA 1007

Query: 495  LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLK-HMLFYSLCINYLQGAKCLAQ 553
            L  N  ++ L L  N L D      NG++     +     H+    L   +L  A C   
Sbjct: 1008 LTGNQHLTHLSLSMNPLGD------NGMNLLCEVMAEPSCHLQDLELVQCHLTAACCKNV 1061

Query: 554  SFKVV-NEALTSIDLAFNEIRDDGAFAIAQALK 585
            S+ +  ++ L S+DLA N + D G   + + LK
Sbjct: 1062 SYMITRSKHLRSLDLAANALGDSGMAELCEGLK 1094


>gi|399498036|emb|CCG20346.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 28/277 (10%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAE-----ALLEN-----------------------STIRSLHLNG 311
             +NNM    G  ++AE      LLE+                       S ++ L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRD 335

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I
Sbjct: 336 NMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDI 395

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           +A+ A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   G
Sbjct: 396 TAEAASAIASCIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSSNTLRRAG 455

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           A  +A+ +        L++  N I  +G   L E+ K
Sbjct: 456 ARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 149/306 (48%), Gaps = 15/306 (4%)

Query: 311 GNYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           GN   AL   N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+
Sbjct: 195 GNEAEALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMND 252

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            IS + A  V+E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S
Sbjct: 253 GISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGS 312

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           +G   +   L   S +  LDL  N  G +    L + L  H N+  + L +  +   GA 
Sbjct: 313 EGGIVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAI 372

Query: 490 FVADMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--Q 546
            +A+ L+ +  ++++L++  N +  E  S           +  L      SL  N L  +
Sbjct: 373 AIANALKDSAPSLAVLEMTGNDITAEAASAIASCIAAKQLLAKL------SLSENELKDE 426

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           GA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G
Sbjct: 427 GAIQIAKALE-GHSHLIEVDMSSNTLRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEG 483

Query: 607 QSALTD 612
              L +
Sbjct: 484 VDELKE 489



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 28/274 (10%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G   L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG----------- 423
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+            
Sbjct: 399 AASAIASCIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSSNTLRRAGARV 458

Query: 424 -----------------GNNIHSKGASAIARVLK 440
                            GN I  +G   +  + K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGGNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGIVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L+ 
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASCIAAKQLLAKLSLSE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNTLRRAGARVL 459



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------------------- 334
           +A  +     +  L L+ N     GA  +AK LEG+  L E                   
Sbjct: 403 IASCIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSSNTLRRAGARVLAQT 462

Query: 335 ---------LHLHGNSIGDEGIRAL 350
                    L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|399498004|emb|CCG20330.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D+  N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL+++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L+ +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/340 (21%), Positives = 133/340 (39%), Gaps = 57/340 (16%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           +G+ G   + + L   + +  LDLR N    EV     GL    + I   KH     + +
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV-----GLVLCKALI---KHENLTEIYL 361

Query: 543 NYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAFN 570
           +YL    +GA  +A + K                               + L  + L  N
Sbjct: 362 SYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGEN 421

Query: 571 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           E++D+GA  IA+AL+ +  +    +N  +N L + G   L
Sbjct: 422 ELKDEGAIQIAKALEGHSHLIEVDMN--SNALRRAGARVL 459


>gi|399497962|emb|CCG20309.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+ +
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITVEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|326435604|gb|EGD81174.1| hypothetical protein PTSG_13152 [Salpingoeca sp. ATCC 50818]
          Length = 1473

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 1/148 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G  G + + + L DN  ++RL L +  + DEGA A+AE+LK+N+ L+ L L NN I   
Sbjct: 50  LGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFLYNNSIGDE 109

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  +LAE L  N+T++ L L+GN  G  GA ALA+ L+ N +L++LHL  NSI   G  A
Sbjct: 110 GAVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKNSITPVGGAA 169

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           L + L   +  L+ L+I  NS +   AF
Sbjct: 170 LGAALDQNR-TLSRLEINKNSTATARAF 196



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 80/143 (55%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           G+   G +A    L+ N  LK L L  N IGDEG   L ++L  N  ++ L L +  + D
Sbjct: 49  GLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFLYNNSIGD 108

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           EGA A+AE+LK+N+ L+ L+L+ N I   G  +LAE L  N+ ++ LHL  N    +G  
Sbjct: 109 EGAVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKNSITPVGGA 168

Query: 321 ALAKGLEGNKSLRELHLHGNSIG 343
           AL   L+ N++L  L ++ NS  
Sbjct: 169 ALGAALDQNRTLSRLEINKNSTA 191



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 1/157 (0%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           + NN+   + +L +  +   G  ++AEAL +N+ ++ L+L+ N  G  GA ALA+ L+ N
Sbjct: 34  IANNTCGEIADLYDAGLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHN 93

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +L+EL L+ NSIGDEG  AL   L      L  LD+  NSI  +GA  +AE +K+  +L
Sbjct: 94  TTLKELFLYNNSIGDEGAVALAEML-KHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTAL 152

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
             ++L  N I   G   +  AL QNRT++ +++  N+
Sbjct: 153 KQLHLTKNSITPVGGAALGAALDQNRTLSRLEINKNS 189



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 1/139 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +GA A+A+ L+ N  L+ L+L  NSIGDEG  AL   L      L  L + NNSI  +
Sbjct: 51  GVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLK-HNTTLKELFLYNNSIGDE 109

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K+  +L  ++L  N IG EGA  +A+ LK N  +  + L  N+I   G +A
Sbjct: 110 GAVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKNSITPVGGAA 169

Query: 435 IARVLKDNSVITSLDLAYN 453
           +   L  N  ++ L++  N
Sbjct: 170 LGAALDQNRTLSRLEINKN 188



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 80/147 (54%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           + D+ +  +   GA  VAE +K+   L  + L  N IGDEGA  +A+ LK N T+  + L
Sbjct: 42  IADLYDAGLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFL 101

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N+I  +GA A+A +LK N+ +  LDL  N IG +GA AL+E+LK +  +  L L    
Sbjct: 102 YNNSIGDEGAVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKNS 161

Query: 483 IGASGAEFVADMLRYNNTISILDLRAN 509
           I   G   +   L  N T+S L++  N
Sbjct: 162 ITPVGGAALGAALDQNRTLSRLEINKN 188



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 7/160 (4%)

Query: 168 DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           D+     G  G   +AE+L  N   + +    N I   G  A   +L+ N  LK L L  
Sbjct: 44  DLYDAGLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFLYN 103

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N IGDEG   L ++L  N  ++RL L    +  EGA A+AE+LK+N+ L+ L L  N I 
Sbjct: 104 NSIGDEGAVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKNSIT 163

Query: 288 YSGFTSLAEALLENSTIRSLHLNGN-------YGGALGAN 320
             G  +L  AL +N T+  L +N N       +G AL  +
Sbjct: 164 PVGGAALGAALDQNRTLSRLEINKNSTATARAFGAALPVD 203



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 68/119 (57%)

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +LY   +G  GA  +A+ALK N  +  + L  N+I  +GA A+A +LK N+ +  L L  
Sbjct: 44  DLYDAGLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFLYN 103

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N IG +GA AL+E+LK +  +  L L    IG  GA  +A+ML++N  +  L L  N +
Sbjct: 104 NSIGDEGAVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKNSI 162



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 33/166 (19%)

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A+A  LKDN+ +  L L  N IG +GA AL+E+LK +  +  L L    IG  GA  
Sbjct: 54  GARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFLYNNSIGDEGAVA 113

Query: 491 VADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKC 550
           +A+ML++N T+  LDL  N +  E                                GA  
Sbjct: 114 LAEMLKHNTTLKRLDLDGNSIGPE--------------------------------GAVA 141

Query: 551 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 596
           LA+  K  N AL  + L  N I   G  A+  AL  N  ++   +N
Sbjct: 142 LAEMLK-HNTALKQLHLTKNSITPVGGAALGAALDQNRTLSRLEIN 186



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 35/190 (18%)

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           R + +N+     DL    +G  GA+A++E LK +  +  L L    IG  GA  +A+ML+
Sbjct: 32  RAIANNTCGEIADLYDAGLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLK 91

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
           +N T+  L L  N + DE                                GA  LA+  K
Sbjct: 92  HNTTLKELFLYNNSIGDE--------------------------------GAVALAEMLK 119

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 616
             N  L  +DL  N I  +GA A+A+ LK N   A+  L+L  N +T  G +AL  A D 
Sbjct: 120 -HNTTLKRLDLDGNSIGPEGAVALAEMLKHN--TALKQLHLTKNSITPVGGAALGAALDQ 176

Query: 617 VYEMSEKEVN 626
              +S  E+N
Sbjct: 177 NRTLSRLEIN 186


>gi|320164864|gb|EFW41763.1| hypothetical protein CAOG_06895 [Capsaspora owczarzaki ATCC 30864]
          Length = 270

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 3/160 (1%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +LD+ +  I   GA  +AE ++   +L  I L  N IGD GA+ IA+ALK N T+TT+ L
Sbjct: 24  LLDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNSTLTTLYL 83

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GN I   GA  IA  LK N+ +    L  N IG  GA+ ++  L+ +  I +L L   Q
Sbjct: 84  SGNQIGDAGAQDIAEALKVNTTLAVFFLRLNQIGDAGAQDIAAALEVNNGIKSLNLQENQ 143

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           I   GA  +A+ L+ N T++ LDL  N L +   +G N L
Sbjct: 144 IADVGANAIAEALKVNKTLTWLDLSQNFLTN---TGINAL 180



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 29/189 (15%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +L+LN+  I  +G  ++AEAL  N+T+  + L  N+ G +GA A+A+ L+ N +L  L+L
Sbjct: 24  LLDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNSTLTTLYL 83

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            GN IGD                              GA  +AE +K   +L    L +N
Sbjct: 84  SGNQIGD-----------------------------AGAQDIAEALKVNTTLAVFFLRLN 114

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IGD GA+ IA AL+ N  I +++L  N I   GA+AIA  LK N  +T LDL+ N +  
Sbjct: 115 QIGDAGAQDIAAALEVNNGIKSLNLQENQIADVGANAIAEALKVNKTLTWLDLSQNFLTN 174

Query: 458 DGAKALSEV 466
            G  AL + 
Sbjct: 175 TGINALRQT 183



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 99/191 (51%), Gaps = 35/191 (18%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL    I   GA AIA  L+ N+ +T + L  N IG  GA+A++E LK +  + TL L 
Sbjct: 25  LDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNSTLTTLYLS 84

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYS 539
             QIG +GA+ +A+ L+ N T+++  LR N + D                          
Sbjct: 85  GNQIGDAGAQDIAEALKVNTTLAVFFLRLNQIGDA------------------------- 119

Query: 540 LCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                  GA+ +A + +V N  + S++L  N+I D GA AIA+ALK N+   +T L+L+ 
Sbjct: 120 -------GAQDIAAALEV-NNGIKSLNLQENQIADVGANAIAEALKVNK--TLTWLDLSQ 169

Query: 600 NFLTKFGQSAL 610
           NFLT  G +AL
Sbjct: 170 NFLTNTGINAL 180



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 96/206 (46%), Gaps = 33/206 (16%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S Q +N+  ++L      A   +D++    GD G   +AE+L  N T  E+    N I  
Sbjct: 3   SYQNMNQRQRQLYDKAKNASELLDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGD 62

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +A    L+ N  L TL LSGN IGD G                            A+
Sbjct: 63  VGAQAIAEALKVNSTLTTLYLSGNQIGDAG----------------------------AQ 94

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            IAE LK N+ L V  L  N I  +G   +A AL  N+ I+SL+L  N    +GANA+A+
Sbjct: 95  DIAEALKVNTTLAVFFLRLNQIGDAGAQDIAAALEVNNGIKSLNLQENQIADVGANAIAE 154

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRAL 350
            L+ NK+L  L L  N + + GI AL
Sbjct: 155 ALKVNKTLTWLDLSQNFLTNTGINAL 180



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 78/153 (50%), Gaps = 1/153 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L+   IGD G + + + L  N  +  ++L    + D GA+AIAE LK NS L  L L+
Sbjct: 25  LDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNSTLTTLYLS 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G   +AEAL  N+T+    L  N  G  GA  +A  LE N  ++ L+L  N I
Sbjct: 85  GNQIGDAGAQDIAEALKVNTTLAVFFLRLNQIGDAGAQDIAAALEVNNGIKSLNLQENQI 144

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            D G  A+   L   K  L  LD+  N ++  G
Sbjct: 145 ADVGANAIAEALKVNK-TLTWLDLSQNFLTNTG 176


>gi|399497882|emb|CCG20269.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKVLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKVLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|39793913|gb|AAH63566.1| NLRC5 protein [Homo sapiens]
          Length = 837

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 13/297 (4%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 468 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 527

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 528 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 587

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 588 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 646

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 647 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 702

Query: 461 KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE
Sbjct: 703 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDE 754



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 140/341 (41%), Gaps = 59/341 (17%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
           EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 480 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 539

Query: 228 -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                              N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 540 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 599

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEAL-----LEN---------------------S 302
           +L     LR ++L+ N I  +G   LAE+L     LE                       
Sbjct: 600 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 659

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 660 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 715

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L +   +  +DL
Sbjct: 716 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPKMGRLKRVDL 774

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 775 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 815



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 136/339 (40%), Gaps = 24/339 (7%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           +   L ++ +   G   LA  L     +  L L+ N     G  AL + LEG   L+ L 
Sbjct: 468 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 527

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  + + +    AL++   S+   L  L +  NSI   G  H++E ++   SL  ++L  
Sbjct: 528 L-SHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSH 586

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGD G + +A  L     +  IDL GN+I S G   +A  L     +  L L  N +G
Sbjct: 587 NQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 646

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
              A  L++ L  H  +  L L +  +G  GA  +A  L  +  +  + L  N L   V 
Sbjct: 647 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVL 704

Query: 517 SGCNGLSFFH------------------SAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
             C  L                      S+  S   +    L  N L  + A  LAQ   
Sbjct: 705 RFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLP 764

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 595
            +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 765 KMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 802



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 10/255 (3%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 472 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 531

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 532 LLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 591

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL 545
           +G + +A +L     +  +DL  N +     S   G+    S +   + +    L  N L
Sbjct: 592 AGVQHLATILPGLPELRKIDLSGNSI-----SSAGGVQLAESLVLC-RRLEELMLGCNAL 645

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFL 602
                L  + + + + L  + L F+ +   GA ++AQAL  +   E++++   NLA   L
Sbjct: 646 GDPTALGLA-QELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVL 704

Query: 603 TKFGQSALTDAKDLV 617
               +  L    DLV
Sbjct: 705 RFCMELPLLRQIDLV 719



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 39/265 (14%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           ++L LS  P+    +  LC  L D  G   LQLS   L D+  + + + L     L    
Sbjct: 81  RSLCLSECPLEPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDCLPQLPQL---- 136

Query: 281 LNNNMIDYSGFTSLAEALLENST----------IRSLH---------------LNGNYGG 315
            +   +  +G +  +  LL N+           +RSLH                 G + G
Sbjct: 137 -SLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVCCGRFTG 195

Query: 316 AL----GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                    +L   L   K L ++ L  N +GD G+R L+  L        +LD+ +NSI
Sbjct: 196 CSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GLLDLSHNSI 254

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S + A ++ E + +C     +     ++G E + +I  + ++++   T+ L   +   + 
Sbjct: 255 SQESALYLLETLPSCPR---VREASVNLGSEQSFRIHFS-REDQAGKTLRLSECSFRPEH 310

Query: 432 ASAIARVLKDNSVITSLDLAYNPIG 456
            S +A  L  +  +T L L    +G
Sbjct: 311 VSRLATGLSKSLQLTELTLTQCCLG 335


>gi|118385104|ref|XP_001025690.1| Patatin-like phospholipase family protein [Tetrahymena thermophila]
 gi|89307457|gb|EAS05445.1| Patatin-like phospholipase family protein [Tetrahymena thermophila
            SB210]
          Length = 2832

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 177/374 (47%), Gaps = 47/374 (12%)

Query: 147  FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA-----ANG 201
            F+ES Q+ N+  + +    ++D+S     ++ +  L E +   +T      +     +  
Sbjct: 2071 FQESAQSTNK-NELVTDIDTIDLSDIKLSEKNMKHLGEIISLIKTTSSQGLSIFIQNSQE 2129

Query: 202  ITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ---LSSVD 257
              + G+K F  G L++ I    L++S N  G E ++ +C ++   +  ++L    L +  
Sbjct: 2130 TQSKGMKYFCQGALKNEI--NKLDMSKNRFGAEQMEEICLMIEGVSSGQKLNQLFLKNCR 2187

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
            + ++    ++  +K N  LR+L+L++N+ D+ GF    ++L +N+ + SL L+GN     
Sbjct: 2188 INNDLLARLSLAIKKNETLRLLDLSDNLFDHEGFKIFMQSLYDNTNLTSLVLDGNSLSGQ 2247

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G + + KG    + L++LHL    + +  I+ +   L  ++ +L  +D+  N  + K   
Sbjct: 2248 GFSYIKKG----RFLKKLHLEQCWLEEYEIQQICELLKEQQ-QLNYIDLSFNKFNIKSTQ 2302

Query: 378  HVAEYIK--NC-KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            H+   IK  NC K L+   ++  +   + A  I++ L  N ++ T+D+ GN+I + G   
Sbjct: 2303 HLVSSIKKSNCLKELVIKKIFDEEESIQNASHISEILVNNTSLQTLDISGNSIGNDGLIQ 2362

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
              + L+ NSV+  L +  +                           C  G  G   +A++
Sbjct: 2363 FGKALQQNSVLRVLLINDD---------------------------CNFGLRGIANLAEL 2395

Query: 495  LRYNNTISILDLRA 508
            ++YNNT+ +L+++ 
Sbjct: 2396 IQYNNTLQVLEIQG 2409


>gi|354474680|ref|XP_003499558.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 2 [Cricetulus griseus]
          Length = 1012

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 9/241 (3%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKN 272
           LQ  +AL+   L  N +GD GV+ L   L    GV   L L   ++ D G   + E   +
Sbjct: 761 LQRPVALQ---LDHNSVGDVGVEQLLPCL----GVCTALYLRDNNISDRGVCTLIEYALH 813

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
              L+ L L NN +      S+A+ L       SL +  N+  A GA  LA+GL+ N SL
Sbjct: 814 CEQLQKLALFNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLKSNTSL 873

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L   GNS+GD+G +AL   L+  +    +  +GNN I ++GA  +A  ++  KSL  +
Sbjct: 874 QFLGFWGNSVGDKGTQALAEALAGHQSIKWLSLVGNN-IGSEGAQALAMMLEKNKSLEEL 932

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N + DEG   + + LK+N ++  + L  N I   GA A+ + L  NS I  + L  
Sbjct: 933 CLEENHVCDEGVYFLTEGLKRNSSLKILKLSNNGITYGGAEALLQALDRNSTILEVWLRG 992

Query: 453 N 453
           N
Sbjct: 993 N 993



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L++N +   G   L   L       +L+L  N     G   L +
Sbjct: 753 ALAFVLRHLQRPVALQLDHNSVGDVGVEQLLPCL---GVCTALYLRDNNISDRGVCTLIE 809

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D G    M+ L + +     L +GNN I+A GA  +A+ +K
Sbjct: 810 YALHCEQLQKLALFNNKLTD-GCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLK 868

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+AL  +++I  + L GNNI S+GA A+A +L+ N  
Sbjct: 869 SNTSLQFLGFWGNSVGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEKNKS 928

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N +  +G   L+E LK + ++  LKL    I   GAE +   L  N+TI  +
Sbjct: 929 LEELCLEENHVCDEGVYFLTEGLKRNSSLKILKLSNNGITYGGAEALLQALDRNSTILEV 988

Query: 505 DLRAN 509
            LR N
Sbjct: 989 WLRGN 993



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 4/180 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  NS+GD G+  L+  L    G    L + +N+IS +G   + EY  +C+ L  + L
Sbjct: 767 LQLDHNSVGDVGVEQLLPCL----GVCTALYLRDNNISDRGVCTLIEYALHCEQLQKLAL 822

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N 
Sbjct: 823 FNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLKSNTSLQFLGFWGNS 882

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G  G +AL+E L  H +I  L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 883 VGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEKNKSLEELCLEENHVCDE 942



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 6/198 (3%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
            TL E+A        + +      D   + +A+ L + Q    +    N ITAAG +    
Sbjct: 806  TLIEYALHCEQLQKLALFNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQ 865

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
             L+SN +L+ L   GN +GD+G + L + L  +  ++ L L   ++  EGA+A+A +L+ 
Sbjct: 866  GLKSNTSLQFLGFWGNSVGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEK 925

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALGANALAKGLEGN 329
            N  L  L L  N +   G   L E L  NS+++ L L+ N   YG   GA AL + L+ N
Sbjct: 926  NKSLEELCLEENHVCDEGVYFLTEGLKRNSSLKILKLSNNGITYG---GAEALLQALDRN 982

Query: 330  KSLRELHLHGNSIGDEGI 347
             ++ E+ L GN+   E I
Sbjct: 983  STILEVWLRGNTFSLEEI 1000



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 820 LALFNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLKSNTSLQFLGFW 879

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A    L  + ++K L+L GN IG EG + L  +L  N  +E L L    +
Sbjct: 880 GNSVGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEKNKSLEELCLEENHV 939

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG   + E LK NS L++L+L+NN I Y G  +L +AL  NSTI  + L GN
Sbjct: 940 CDEGVYFLTEGLKRNSSLKILKLSNNGITYGGAEALLQALDRNSTILEVWLRGN 993



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 4/247 (1%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
            + L+   ++ +   + GD G+  L   LG       +    N I+  G+           
Sbjct: 759  RHLQRPVALQLDHNSVGDVGVEQLLPCLG---VCTALYLRDNNISDRGVCTLIEYALHCE 815

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L+ L L  N + D     +  +L        L++ +  +   GA+ +A+ LK+N+ L+ 
Sbjct: 816  QLQKLALFNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLKSNTSLQF 875

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L    N +   G  +LAEAL  + +I+ L L GN  G+ GA ALA  LE NKSL EL L 
Sbjct: 876  LGFWGNSVGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEKNKSLEELCLE 935

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + DEG+  L  GL  R   L +L + NN I+  GA  + + +    ++L + L  N 
Sbjct: 936  ENHVCDEGVYFLTEGL-KRNSSLKILKLSNNGITYGGAEALLQALDRNSTILEVWLRGNT 994

Query: 399  IGDEGAE 405
               E  E
Sbjct: 995  FSLEEIE 1001


>gi|154332027|ref|XP_001561830.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059151|emb|CAM36849.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 442

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 154/323 (47%), Gaps = 25/323 (7%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K +  VLQ       ++L+G  +G  G   +   L  N  V  L LS  +L D+GA +IA
Sbjct: 29  KRWRSVLQET----RVDLAGRALGPRGALIVGTALFRNTYVTFLDLSHNELGDDGAISIA 84

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-----------NSTIRSLHLNGNYGGA 316
            +L+ N+ ++ L L++N +  +G  +LA A +            N T+ +L L GN  G 
Sbjct: 85  SMLRGNTHVQYLNLSHNNMTDAGGIALASAFIPNVSPSGQPGQWNRTLFTLVLMGNRLGD 144

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
               A+      ++ L  + L  N++G+ G + LM   +  +  L V ++  N+I  +GA
Sbjct: 145 DTLLAMGNAAACHRDLTRVDLSWNTVGENGTKCLMR--AYERNPLCVYELAANAIGDEGA 202

Query: 377 FHVAEYIKNC--KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            ++ E ++    K+   +NLY N I   GAE +   +  +  +  + L  N I  KG  A
Sbjct: 203 VYLCEALQRHGGKTQTTLNLYRNSISCPGAEAVGRLVASSSIVQDVSLACNTIGFKGVQA 262

Query: 435 IARVLKDNSVIT-----SLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGA 488
           + R L D +VI      SL+L+ N IG +GA +++ ++K    ++  L +   +I   GA
Sbjct: 263 LQRQLTDAAVIASCTLRSLNLSDNWIGDEGAASVAAIIKADLPSLERLDVSENKITDVGA 322

Query: 489 EFVADMLRYNNTISILDLRANGL 511
             +      N  + +L+  AN L
Sbjct: 323 TAIITAALQNTHLLLLNCEANRL 345



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 26/265 (9%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R   ++ + G   GD+ L  +  +   ++    V  + N +   G K      + N  L 
Sbjct: 130 RTLFTLVLMGNRLGDDTLLAMGNAAACHRDLTRVDLSWNTVGENGTKCLMRAYERN-PLC 188

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+ N IGDEG   LC+ L  + G  +  L L    +   GA+A+  L+ ++SI++ +
Sbjct: 189 VYELAANAIGDEGAVYLCEALQRHGGKTQTTLNLYRNSISCPGAEAVGRLVASSSIVQDV 248

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I + G  +L   L + + I S                        +LR L+L  
Sbjct: 249 SLACNTIGFKGVQALQRQLTDAAVIASC-----------------------TLRSLNLSD 285

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG  ++ + + +    L  LD+  N I+  GA  +         LL +N   N +
Sbjct: 286 NWIGDEGAASVAAIIKADLPSLERLDVSENKITDVGATAIITAALQNTHLLLLNCEANRL 345

Query: 400 GDEGAEKIADALKQNRTITTIDLGG 424
           G +  + +   + + RT+ ++++ G
Sbjct: 346 GPKAVDAVVRLIHETRTLKSLNVAG 370



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 146/333 (43%), Gaps = 41/333 (12%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           AL  N+ +  L L+ N  G  GA ++A  L GN  ++ L+L  N++ D G  AL S    
Sbjct: 58  ALFRNTYVTFLDLSHNELGDDGAISIASMLRGNTHVQYLNLSHNNMTDAGGIALASAF-- 115

Query: 357 RKGKLAVLDIGNNSISAK-GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                    I N S S + G ++        ++L  + L  N +GD+    + +A   +R
Sbjct: 116 ---------IPNVSPSGQPGQWN--------RTLFTLVLMGNRLGDDTLLAMGNAAACHR 158

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG--NI 473
            +T +DL  N +   G   + R  + N +    +LA N IG +GA  L E L+ HG    
Sbjct: 159 DLTRVDLSWNTVGENGTKCLMRAYERNPLCV-YELAANAIGDEGAVYLCEALQRHGGKTQ 217

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFH-----SA 528
            TL L    I   GAE V  ++  ++ +  + L  N +      G  G+         +A
Sbjct: 218 TTLNLYRNSISCPGAEAVGRLVASSSIVQDVSLACNTI------GFKGVQALQRQLTDAA 271

Query: 529 IYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 586
           + +   +   +L  N++  +GA  +A   K    +L  +D++ N+I D GA AI  A   
Sbjct: 272 VIASCTLRSLNLSDNWIGDEGAASVAAIIKADLPSLERLDVSENKITDVGATAIITAALQ 331

Query: 587 NEDVAVTSLNLANNFLTKFGQSALTDAKDLVYE 619
           N     T L L N    + G  A+     L++E
Sbjct: 332 N-----THLLLLNCEANRLGPKAVDAVVRLIHE 359



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 21/206 (10%)

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T +DL G  +  +GA  +   L  N+ +T LDL++N +G DGA +++ +L+ + ++  L 
Sbjct: 38  TRVDLAGRALGPRGALIVGTALFRNTYVTFLDLSHNELGDDGAISIASMLRGNTHVQYLN 97

Query: 478 LGWCQIGASGAEFVADML-----------RYNNTISILDLRANGLRDEVCSGCNGLSFFH 526
           L    +  +G   +A              ++N T+  L L  N L D+        +  H
Sbjct: 98  LSHNNMTDAGGIALASAFIPNVSPSGQPGQWNRTLFTLVLMGNRLGDDTLLAMGNAAACH 157

Query: 527 SAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                 + +    L  N +   G KCL ++++     L   +LA N I D+GA  + +AL
Sbjct: 158 ------RDLTRVDLSWNTVGENGTKCLMRAYE--RNPLCVYELAANAIGDEGAVYLCEAL 209

Query: 585 KANEDVAVTSLNLANNFLTKFGQSAL 610
           + +     T+LNL  N ++  G  A+
Sbjct: 210 QRHGGKTQTTLNLYRNSISCPGAEAV 235


>gi|290989301|ref|XP_002677276.1| predicted protein [Naegleria gruberi]
 gi|284090883|gb|EFC44532.1| predicted protein [Naegleria gruberi]
          Length = 881

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 175/395 (44%), Gaps = 50/395 (12%)

Query: 157 FAKELRAFSSVDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           FA   +   S  +S R     D+ +  +A +L  N+   E+  + N +T         +L
Sbjct: 75  FALNDKNIKSCILSNRKKMLTDKDVICIATALTTNKHILELDLSDNNLTEEISSYLGDML 134

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR----DEGAKAIAELL 270
           + N  L+      N +GD+G+  +   +  N       ++ +DLR       A  ++ + 
Sbjct: 135 KRNTVLQKFTCGNNKLGDQGISYIYQCIGSNPFS---LVNYIDLRGNRISSAAAYLSSVF 191

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            +N I ++L L NN+ID  G   +A  L+ N++++ L+L  N  G  GA+ +AK L  N 
Sbjct: 192 ASNRI-QILNLQNNLIDEEGAKVIAFELMNNTSLKVLNLQHNKIGDKGASHIAKMLASNI 250

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +L+EL L  N I  EG  +L++GL S                              KSLL
Sbjct: 251 TLQELDLGSNRISVEGASSLVTGLKSN-----------------------------KSLL 281

Query: 391 WINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITS-- 447
            +NL  N +GD GA   +  L QN   +  + LG N     GA A++ +LK N+ +    
Sbjct: 282 KLNLRSNIMGDPGAYMFSKCLTQNSNFLEELYLGFNGFTIDGAVALSNMLKTNNRLKKFD 341

Query: 448 -----LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
                LDL    I +D  K    +LK + +I++      ++    A+ +++ L+ NNT+ 
Sbjct: 342 IQGIMLDLTSMKIISDSLKENHSLLKLYLDIDS---DSTKLAPQVAKTISEALQSNNTLQ 398

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLF 537
            L +  +   +E  +  N +S   S++ S     F
Sbjct: 399 DLIIGGDMDFEESINPRNSMSSMPSSVQSTPRQHF 433



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 45/290 (15%)

Query: 333 RELHL-HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           RE+++ H + IG +     +  L+ +  K  +L      ++ K    +A  +   K +L 
Sbjct: 55  REIYMNHCSKIGIDPTFEFIFALNDKNIKSCILSNRKKMLTDKDVICIATALTTNKHILE 114

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLD 449
           ++L  N++ +E +  + D LK+N  +     G N +  +G S I + +  N  S++  +D
Sbjct: 115 LDLSDNNLTEEISSYLGDMLKRNTVLQKFTCGNNKLGDQGISYIYQCIGSNPFSLVNYID 174

Query: 450 L---------AY-----------------NPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           L         AY                 N I  +GAK ++  L  + ++  L L   +I
Sbjct: 175 LRGNRISSAAAYLSSVFASNRIQILNLQNNLIDEEGAKVIAFELMNNTSLKVLNLQHNKI 234

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCIN 543
           G  GA  +A ML  N T+  LDL +N +  E      G S   + + S K +L  +L  N
Sbjct: 235 GDKGASHIAKMLASNITLQELDLGSNRISVE------GASSLVTGLKSNKSLLKLNLRSN 288

Query: 544 YL--QGA----KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
            +   GA    KCL Q+   + E    + L FN    DGA A++  LK N
Sbjct: 289 IMGDPGAYMFSKCLTQNSNFLEE----LYLGFNGFTIDGAVALSNMLKTN 334


>gi|344280952|ref|XP_003412245.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14
            [Loxodonta africana]
          Length = 1196

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 181/407 (44%), Gaps = 41/407 (10%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  N + +  +K LC ++   N  +++L L  V   D G K I  +L
Sbjct: 665  SVLHTNEDLRELDLFHNHLDELVIKILCQELRHPNCKLQKLLLRFVSFPD-GCKDIFSVL 723

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGN 329
              N  L  L+L  + +  +G  SL EAL   +  +++L L       +    ++  L  N
Sbjct: 724  TQNQNLIHLDLKGSDVGDNGVKSLCEALKCPDCKLQNLRLESCNLSTVCCLNISNALIRN 783

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G+  L   L      L  L I    ++  G   ++  + + K L
Sbjct: 784  QSLIFLNLSTNNLLDDGVELLCEALRHPMCYLQRLSIERCGLTVAGCEDLSSSLISSKRL 843

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              ++L  N +GD+G + I+DALK  R T+ ++ L   N  S     ++  L  N  +T L
Sbjct: 844  THLSLADNFLGDDGVKLISDALKHPRCTLRSLVLRRCNFTSLSTEYLSASLLLNKSLTHL 903

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLRYNNTISILDL 506
            DL  N +  DG K L + ++ H + N   LG   C + ++    +A  +  N  + ILDL
Sbjct: 904  DLGSNCLKDDGVKLLCDAVR-HPSCNLQDLGLMGCALTSACCLDLASAILNNPNLRILDL 962

Query: 507  RANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSID 566
              N L+D+                                GAK L ++ +  +  +  ++
Sbjct: 963  GNNNLQDD--------------------------------GAKILCEALRHPSCNIERLE 990

Query: 567  LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            L +  +       ++  L++N+   +T +NL  N L + G   L DA
Sbjct: 991  LEYCGLTALCCQELSATLRSNQ--RLTKINLTRNILGREGIKTLCDA 1035



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 153/323 (47%), Gaps = 7/323 (2%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAK 264
            G K    VL  N  L  L+L G+ +GD GVK LC+ L   +  ++ L+L S +L      
Sbjct: 715  GCKDIFSVLTQNQNLIHLDLKGSDVGDNGVKSLCEALKCPDCKLQNLRLESCNLSTVCCL 774

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANAL 322
             I+  L  N  L  L L+ NN++D  G   L EAL      ++ L +        G   L
Sbjct: 775  NISNALIRNQSLIFLNLSTNNLLD-DGVELLCEALRHPMCYLQRLSIERCGLTVAGCEDL 833

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  +K L  L L  N +GD+G++ +   L   +  L  L +   + ++    +++  
Sbjct: 834  SSSLISSKRLTHLSLADNFLGDDGVKLISDALKHPRCTLRSLVLRRCNFTSLSTEYLSAS 893

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            +   KSL  ++L  N + D+G + + DA++     +  + L G  + S     +A  + +
Sbjct: 894  LLLNKSLTHLDLGSNCLKDDGVKLLCDAVRHPSCNLQDLGLMGCALTSACCLDLASAILN 953

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +  LDL  N +  DGAK L E L+    NI  L+L +C + A   + ++  LR N  
Sbjct: 954  NPNLRILDLGNNNLQDDGAKILCEALRHPSCNIERLELEYCGLTALCCQELSATLRSNQR 1013

Query: 501  ISILDLRANGL-RDEVCSGCNGL 522
            ++ ++L  N L R+ + + C+ L
Sbjct: 1014 LTKINLTRNILGREGIKTLCDAL 1036



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 154/325 (47%), Gaps = 12/325 (3%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L +N +D      L + L   N  ++ L L        G   +  
Sbjct: 663 LCSVLHTNEDLRELDLFHNHLDELVIKILCQELRHPNCKLQKLLLRF-VSFPDGCKDIFS 721

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N++L  L L G+ +GD G+++L   L     KL  L + + ++S     +++  + 
Sbjct: 722 VLTQNQNLIHLDLKGSDVGDNGVKSLCEALKCPDCKLQNLRLESCNLSTVCCLNISNALI 781

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G E + +AL+     +  + +    +   G   ++  L  + 
Sbjct: 782 RNQSLIFLNLSTNNLLDDGVELLCEALRHPMCYLQRLSIERCGLTVAGCEDLSSSLISSK 841

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G DG K +S+ LK     + +L L  C   +   E+++  L  N +++
Sbjct: 842 RLTHLSLADNFLGDDGVKLISDALKHPRCTLRSLVLRRCNFTSLSTEYLSASLLLNKSLT 901

Query: 503 ILDLRANGLRDEVCSGCNGLSFFHSAI-YSLKHMLFYSLCINYLQGAKCLAQSFKVVNEA 561
            LDL +N L+D      +G+     A+ +   ++    L    L  A CL  +  ++N  
Sbjct: 902 HLDLGSNCLKD------DGVKLLCDAVRHPSCNLQDLGLMGCALTSACCLDLASAILNNP 955

Query: 562 -LTSIDLAFNEIRDDGAFAIAQALK 585
            L  +DL  N ++DDGA  + +AL+
Sbjct: 956 NLRILDLGNNNLQDDGAKILCEALR 980



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 13/262 (4%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L +     + +S    G+T AG +     L S+  L  L+L
Sbjct: 789  LNLSTNNLLDDGVELLCEALRHPMCYLQRLSIERCGLTVAGCEDLSSSLISSKRLTHLSL 848

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI------AELLKNNSILRVL 279
            + N +GD+GVK    ++ D     R  L S+ LR     ++      A LL N S+   L
Sbjct: 849  ADNFLGDDGVK----LISDALKHPRCTLRSLVLRRCNFTSLSTEYLSASLLLNKSLTH-L 903

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L +N +   G   L +A+   S  ++ L L G    +     LA  +  N +LR L L 
Sbjct: 904  DLGSNCLKDDGVKLLCDAVRHPSCNLQDLGLMGCALTSACCLDLASAILNNPNLRILDLG 963

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N++ D+G + L   L      +  L++    ++A     ++  +++ + L  INL  N 
Sbjct: 964  NNNLQDDGAKILCEALRHPSCNIERLELEYCGLTALCCQELSATLRSNQRLTKINLTRNI 1023

Query: 399  IGDEGAEKIADALKQNRTITTI 420
            +G EG + + DAL+  R    I
Sbjct: 1024 LGREGIKTLCDALQSPRCKLQI 1045


>gi|125553178|gb|EAY98887.1| hypothetical protein OsI_20842 [Oryza sativa Indica Group]
          Length = 544

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 139/275 (50%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF+ +L+S   L+ L +  + I +E  + L +++     ++ L   
Sbjct: 220 LNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKILHFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA  IAE++K +  L     +   I   G  +LAEAL   + ++ L L  N  
Sbjct: 280 NNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L EL+L   ++ ++G  A+++ L     +L VL++  N I+AK
Sbjct: 340 GVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAK 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGAS 433
            +  +AE +   +SL  + L  N++ D+GA  IA +L+  ++ +  +D+  N +   GA 
Sbjct: 400 ASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQDLKELDVSTNMLQRVGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             A+ + +      L++  N I  +G   + ++LK
Sbjct: 460 CFAQAIANKPGFVQLNINGNFISDEGIDEVKDILK 494



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 39/287 (13%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K LEG+  LR L++  N++G++G+RA    L S+   L  L + N+ IS + A  ++E
Sbjct: 208 FSKALEGS-VLRYLNISDNALGEKGVRAFEELLKSQDN-LEELYVMNDGISEEAAQALSE 265

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I + + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A+A  L  
Sbjct: 266 LIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGT 325

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
            + +  LDL  N  G +   ALS+ L    ++  L L    +   G   + + L+ +   
Sbjct: 326 CTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQ 385

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           + +L++  N +  +                                 A+CL        +
Sbjct: 386 LEVLEMAGNEINAKASQAL----------------------------AECL-----TAMQ 412

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALK-ANEDVAVTSLNLANNFLTKFG 606
           +L  + LA NE++DDGA  IA++L+  ++D  +  L+++ N L + G
Sbjct: 413 SLKKLTLAENELKDDGAVVIAKSLEDGHQD--LKELDVSTNMLQRVG 457



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 102/247 (41%), Gaps = 30/247 (12%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
            E+ Q L+E          +       GDEG  F+AE +  +   E    +A  I + G 
Sbjct: 257 EEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGG 316

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L +   LK L+L  N  G E    L   L     +  L LS ++L ++G  AI 
Sbjct: 317 VALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAII 376

Query: 268 ELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK ++  L VLE+  N I+     +LAE L    +++ L L  N     GA  +AK L
Sbjct: 377 NTLKQSAPQLEVLEMAGNEINAKASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSL 436

Query: 327 E-GNKSLREL----------------------------HLHGNSIGDEGIRALMSGLSSR 357
           E G++ L+EL                            +++GN I DEGI  +   L S 
Sbjct: 437 EDGHQDLKELDVSTNMLQRVGARCFAQAIANKPGFVQLNINGNFISDEGIDEVKDILKSG 496

Query: 358 KGKLAVL 364
           +  + VL
Sbjct: 497 ENSVEVL 503


>gi|431914118|gb|ELK15377.1| Nucleotide-binding oligomerization domain-containing protein 2
           [Pteropus alecto]
          Length = 1017

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 4/196 (2%)

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           +L L+ N  G +G   L   L   K+L   +L  N+I D GI  L+   +    KL  L 
Sbjct: 767 ALQLDHNSVGDVGVEQLLPCLGVCKAL---YLRDNNISDRGICKLIEH-ALHCEKLQKLA 822

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +GNN I+A GA  +A+ ++   SL ++  + N +GDEGA+ +A+A+  ++++  + L GN
Sbjct: 823 LGNNHITAAGAQVLAQGLRANASLQFLGFWGNKVGDEGAQALAEAVGDHQSLKWLSLVGN 882

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           +I S GA A+A +L+ N  +  L L  N +  +G  +L+E LK + ++  LKL   +I  
Sbjct: 883 DIGSTGARALASMLEKNVALEELCLEENHLQDEGVCSLAEGLKRNSSLKVLKLSNNRITC 942

Query: 486 SGAEFVADMLRYNNTI 501
            GAE +   L  N+TI
Sbjct: 943 RGAEALLKALERNDTI 958



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 29/212 (13%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G   + +LL    + + L L +N I   G   L E  L    ++ L L  N+  A GA  
Sbjct: 776 GDVGVEQLLPCLGVCKALYLRDNNISDRGICKLIEHALHCEKLQKLALGNNHITAAGAQV 835

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+GL  N SL+ L   GN +GDEG +AL                             AE
Sbjct: 836 LAQGLRANASLQFLGFWGNKVGDEGAQAL-----------------------------AE 866

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + + +SL W++L  NDIG  GA  +A  L++N  +  + L  N++  +G  ++A  LK 
Sbjct: 867 AVGDHQSLKWLSLVGNDIGSTGARALASMLEKNVALEELCLEENHLQDEGVCSLAEGLKR 926

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NS +  L L+ N I   GA+AL + L+ +  I
Sbjct: 927 NSSLKVLKLSNNRITCRGAEALLKALERNDTI 958



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 89/165 (53%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G+  L E   + +  ++++   N ITAAG +     L++N +L+ L   GN +GD
Sbjct: 799 NISDRGICKLIEHALHCEKLQKLALGNNHITAAGAQVLAQGLRANASLQFLGFWGNKVGD 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EG + L + + D+  ++ L L   D+   GA+A+A +L+ N  L  L L  N +   G  
Sbjct: 859 EGAQALAEAVGDHQSLKWLSLVGNDIGSTGARALASMLEKNVALEELCLEENHLQDEGVC 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           SLAE L  NS+++ L L+ N     GA AL K LE N ++ E+ L
Sbjct: 919 SLAEGLKRNSSLKVLKLSNNRITCRGAEALLKALERNDTILEVWL 963



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 1/156 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L L  N I D G+  L +  +    +++L L +  +   GA+ +A+ L+ N+ L+ L 
Sbjct: 791 KALYLRDNNISDRGICKLIEHALHCEKLQKLALGNNHITAAGAQVLAQGLRANASLQFLG 850

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
              N +   G  +LAEA+ ++ +++ L L GN  G+ GA ALA  LE N +L EL L  N
Sbjct: 851 FWGNKVGDEGAQALAEAVGDHQSLKWLSLVGNDIGSTGARALASMLEKNVALEELCLEEN 910

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            + DEG+ +L  GL  R   L VL + NN I+ +GA
Sbjct: 911 HLQDEGVCSLAEGL-KRNSSLKVLKLSNNRITCRGA 945



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 283 NNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYGGALGAN--ALAKGLEGNK 330
            +M    GF  L  +L E          +R L   HL   + G   A   ALA  L   +
Sbjct: 704 KSMHAMPGFVWLIRSLYEMREERLAREAVRGLNVGHLKLTFCGVGPAECAALAFVLRHLR 763

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
               L L  NS+GD G+  L+  L    G    L + +N+IS +G   + E+  +C+ L 
Sbjct: 764 QPVALQLDHNSVGDVGVEQLLPCL----GVCKALYLRDNNISDRGICKLIEHALHCEKLQ 819

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L  N I   GA+ +A  L+ N ++  +   GN +  +GA A+A  + D+  +  L L
Sbjct: 820 KLALGNNHITAAGAQVLAQGLRANASLQFLGFWGNKVGDEGAQALAEAVGDHQSLKWLSL 879

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             N IG+ GA+AL+ +L+ +  +  L L    +   G   +A+ L+ N+++ +L L  N 
Sbjct: 880 VGNDIGSTGARALASMLEKNVALEELCLEENHLQDEGVCSLAEGLKRNSSLKVLKLSNNR 939

Query: 511 LRDEVCSGCNGL 522
           +    C G   L
Sbjct: 940 I---TCRGAEAL 948


>gi|403369389|gb|EJY84539.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 825

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 160/339 (47%), Gaps = 10/339 (2%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L++ +  NQ    +    N +   G+K     +  +  +  L+LS N I  +G K +   
Sbjct: 240 LSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHKGAKKIFTS 299

Query: 242 LVDNAGVERLQLSSVD------LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           L+ N  +  L+L S+D      +  +G + +  LL+++  L+ L+L +N++  +G  +L 
Sbjct: 300 LLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILSDNGIVTLC 359

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           +AL +N T+ SL+L  N   + G   L   L     L EL L GN +G++GI  L   +S
Sbjct: 360 DALFQNKTLVSLNLGSNEITSYGMERLKDALLTT-VLNELDLTGNPLGNQGIDYLGQYMS 418

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                L  L+I      + G+  + + ++ C SL  + L  ND+    +  +   +    
Sbjct: 419 HADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLKSRNSSYLTTGIYHG- 477

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNIN 474
            +T + +   N+      ++A  L  +  + +L L YN +  + AK L+E L K   NI 
Sbjct: 478 -LTYLSMIRCNLGDDEGISVAEGLSRSRQLKALILQYNSLSDEAAKTLAEALAKPTVNIE 536

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            L L   +I  +G + +   L  N+ +S L+L++  L++
Sbjct: 537 HLDLSHNKINDAGGQLIGISLGQNSLLSKLNLKSINLKE 575



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 31/329 (9%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           T L++ +  N  I  + L  N  G  G   L K +  +K++  L L  N I  +G + + 
Sbjct: 238 TELSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHKGAKKIF 297

Query: 352 SGL----SSRKGKLAVLD-IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           + L    S    KL  +D +  N +  KG  H+   +++ K L +++L  N + D G   
Sbjct: 298 TSLLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILSDNGIVT 357

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + DAL QN+T+ +++LG N I S G   +   L   +V+  LDL  NP+G  G   L + 
Sbjct: 358 LCDALFQNKTLVSLNLGSNEITSYGMERLKDALL-TTVLNELDLTGNPLGNQGIDYLGQY 416

Query: 467 LKFHGNINTLKL--GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSF 524
           +  H + N ++L    C+  + G+  +   +R  +++  L L  N L+          S+
Sbjct: 417 MS-HADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLK------SRNSSY 469

Query: 525 FHSAIYSLKHMLFYSLCINYLQG-------AKCLAQSFKVVNEALTSIDLAFNEIRDDGA 577
             + IY   H L Y   I    G       A+ L++S       L ++ L +N + D+ A
Sbjct: 470 LTTGIY---HGLTYLSMIRCNLGDDEGISVAEGLSRS-----RQLKALILQYNSLSDEAA 521

Query: 578 FAIAQALKANEDVAVTSLNLANNFLTKFG 606
             +A+AL A   V +  L+L++N +   G
Sbjct: 522 KTLAEAL-AKPTVNIEHLDLSHNKINDAG 549



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 36/334 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+      D G+  L ++L  N+T   ++  +N IT+ G++     L + + L  L+L+
Sbjct: 343 LDLRSNILSDNGIVTLCDALFQNKTLVSLNLGSNEITSYGMERLKDALLTTV-LNELDLT 401

Query: 227 GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           GNP+G++G+  L   +   +  + RL +S    +  G+  + + ++  S L+ L L+ N 
Sbjct: 402 GNPLGNQGIDYLGQYMSHADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKND 461

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +     + L   +    T  S+ +  N G   G  ++A+GL  ++ L+ L L  NS+ DE
Sbjct: 462 LKSRNSSYLTTGIYHGLTYLSM-IRCNLGDDEGI-SVAEGLSRSRQLKALILQYNSLSDE 519

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
             + L   L+     +  LD+ +N I+                            D G +
Sbjct: 520 AAKTLAEALAKPTVNIEHLDLSHNKIN----------------------------DAGGQ 551

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            I  +L QN  ++ ++L   N+     S  A+ +K NS I  LDL+ N +  +  + + +
Sbjct: 552 LIGISLGQNSLLSKLNLKSINLKETTGSLFAKSVKQNSQIQFLDLSKNSVPVNFIEDIEQ 611

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            L+    +N ++    +I     E V   L   N
Sbjct: 612 QLQ----VNLIRAAKNKIPQYKTEVVQLKLEQEN 641


>gi|332256537|ref|XP_003277375.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 5 [Nomascus
            leucogenys]
          Length = 1191

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 17/286 (5%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  S+ ++G    D+G+  L+++L  +Q A +++     GITA G ++    L SN +L 
Sbjct: 844  SLKSLSLAGNKVTDQGVTALSDALKVSQCALQKLILEDCGITATGCQSLASALVSNRSLT 903

Query: 222  TLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             L LS N +G+EGV  LC  + + +  ++RL L+   L   G   +A  L  NS L  L 
Sbjct: 904  HLCLSNNGLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALVANSWLTHLS 963

Query: 281  LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ N ++ +G   L E + E S  ++ L L   +  A    +L+  +  N+ L+ L L  
Sbjct: 964  LSMNPVEDNGVKLLCEIMREPSCHLQDLELVKCHLTAACCESLSCVVSRNRHLKSLDLTD 1023

Query: 340  NSIGDEGIRALM--SGLSSRKGK-----------LAVLDIGNNSISAKGAFHVAE-YIKN 385
            N++GD G+ AL+   GL+S   +           L  L++  N+ S KG   +   +   
Sbjct: 1024 NALGDGGVTALLKACGLTSDCCEALSSALSCNRHLTSLNLVQNNFSPKGMMKLCSAFACP 1083

Query: 386  CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              +L  I L    +  +  E ++ AL  NR +T+++L  NN   KG
Sbjct: 1084 TSNLQIIGLKACGLTSDCCEALSSALSCNRHLTSLNLVQNNFSPKG 1129



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 194/461 (42%), Gaps = 49/461 (10%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSG 227
            M G+   +E        LG +    ++   ++ +T   +K     L+ +   ++TL    
Sbjct: 709  MWGKTLIEEQWEDFCSVLGTHPHLRQLDLGSSILTERAMKTLCAKLRHHTCKIQTLMFRN 768

Query: 228  NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
              I   G++ L   L+ N  +  L L    L++E  +   E LK+   L    L +  +D
Sbjct: 769  AQITP-GLQHLWRTLIANRNLRFLNLGGTHLKEEDVRMACEALKHPKCL----LESLRLD 823

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
              G T             + +L            +++ L  + SL+ L L GN + D+G+
Sbjct: 824  RCGLT------------HACYLK-----------ISQILTTSPSLKSLSLAGNKVTDQGV 860

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
             AL   L   +  L  L + +  I+A G   +A  + + +SL  + L  N +G+EG   +
Sbjct: 861  TALSDALKVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNGLGNEGVNLL 920

Query: 408  ADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
              +++  + ++  + L   ++ + G   +A  L  NS +T L L+ NP+  +G K L E+
Sbjct: 921  CRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALVANSWLTHLSLSMNPVEDNGVKLLCEI 980

Query: 467  LKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD-------EVC-- 516
            ++    ++  L+L  C + A+  E ++ ++  N  +  LDL  N L D       + C  
Sbjct: 981  MREPSCHLQDLELVKCHLTAACCESLSCVVSRNRHLKSLDLTDNALGDGGVTALLKACGL 1040

Query: 517  --SGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEI 572
                C  LS   SA+   +H+   +L  N    +G   L  +F      L  I L    +
Sbjct: 1041 TSDCCEALS---SALSCNRHLTSLNLVQNNFSPKGMMKLCSAFACPTSNLQIIGLKACGL 1097

Query: 573  RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
              D   A++ AL  N    +TSLNL  N  +  G   L  A
Sbjct: 1098 TSDCCEALSSALSCNRH--LTSLNLVQNNFSPKGMMKLCSA 1136



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 18/335 (5%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R    +++ G +  +E +    E+L + +   E +     G+T A       +L ++ +L
Sbjct: 786  RNLRFLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDRCGLTHACYLKISQILTTSPSL 845

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GV  L D L V    +++L L    +   G +++A  L +N  L  L
Sbjct: 846  KSLSLAGNKVTDQGVTALSDALKVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHL 905

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+NN +   G   L  ++ L + +++ L LN  +    G   LA  L  N  L  L L 
Sbjct: 906  CLSNNGLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALVANSWLTHLSLS 965

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G++ L   +      L  L++    ++A     ++  +   + L  ++L  N 
Sbjct: 966  MNPVEDNGVKLLCEIMREPSCHLQDLELVKCHLTAACCESLSCVVSRNRHLKSLDLTDNA 1025

Query: 399  IGDEG--------------AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNS 443
            +GD G               E ++ AL  NR +T+++L  NN   KG   +        S
Sbjct: 1026 LGDGGVTALLKACGLTSDCCEALSSALSCNRHLTSLNLVQNNFSPKGMMKLCSAFACPTS 1085

Query: 444  VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
             +  + L    + +D  +ALS  L  + ++ +L L
Sbjct: 1086 NLQIIGLKACGLTSDCCEALSSALSCNRHLTSLNL 1120


>gi|399497876|emb|CCG20266.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 133/274 (48%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S +  L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLEKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +     +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHPIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMYSHLEKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  +  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 GHSHPI-EVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 45.8 bits (107), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     L+ L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLEKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S    + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHPIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|115465205|ref|NP_001056202.1| Os05g0543200 [Oryza sativa Japonica Group]
 gi|52353428|gb|AAU43996.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113579753|dbj|BAF18116.1| Os05g0543200 [Oryza sativa Japonica Group]
 gi|215769086|dbj|BAH01315.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632425|gb|EEE64557.1| hypothetical protein OsJ_19409 [Oryza sativa Japonica Group]
          Length = 544

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 139/275 (50%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF+ +L+S   L+ L +  + I +E  + L +++     ++ L   
Sbjct: 220 LNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKILHFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA  IAE++K +  L     +   I   G  +LAEAL   + ++ L L  N  
Sbjct: 280 NNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L EL+L   ++ ++G  A+++ L     +L VL++  N I+AK
Sbjct: 340 GVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAK 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGAS 433
            +  +AE +   +SL  + L  N++ D+GA  IA +L+  ++ +  +D+  N +   GA 
Sbjct: 400 ASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQDLKELDVSTNMLQRVGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             A+ + +      L++  N I  +G   + ++LK
Sbjct: 460 CFAQAIANKPGFVQLNINGNFISDEGIDEVKDILK 494



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 39/287 (13%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K LEG   LR L++  N++G++G+RA    L S+   L  L + N+ IS + A  ++E
Sbjct: 208 FSKALEG-AVLRYLNISDNALGEKGVRAFEELLKSQDN-LEELYVMNDGISEEAAQALSE 265

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I + + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A+A  L  
Sbjct: 266 LIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGT 325

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
            + +  LDL  N  G +   ALS+ L    ++  L L    +   G   + + L+ +   
Sbjct: 326 CTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQ 385

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           + +L++  N +  +                                 A+CL        +
Sbjct: 386 LEVLEMAGNEINAKASQAL----------------------------AECL-----TAMQ 412

Query: 561 ALTSIDLAFNEIRDDGAFAIAQALK-ANEDVAVTSLNLANNFLTKFG 606
           +L  + LA NE++DDGA  IA++L+  ++D  +  L+++ N L + G
Sbjct: 413 SLKKLTLAENELKDDGAVVIAKSLEDGHQD--LKELDVSTNMLQRVG 457



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 102/247 (41%), Gaps = 30/247 (12%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
            E+ Q L+E          +       GDEG  F+AE +  +   E    +A  I + G 
Sbjct: 257 EEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGG 316

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L +   LK L+L  N  G E    L   L     +  L LS ++L ++G  AI 
Sbjct: 317 VALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAII 376

Query: 268 ELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK ++  L VLE+  N I+     +LAE L    +++ L L  N     GA  +AK L
Sbjct: 377 NTLKQSAPQLEVLEMAGNEINAKASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSL 436

Query: 327 E-GNKSLREL----------------------------HLHGNSIGDEGIRALMSGLSSR 357
           E G++ L+EL                            +++GN I DEGI  +   L S 
Sbjct: 437 EDGHQDLKELDVSTNMLQRVGARCFAQAIANKPGFVQLNINGNFISDEGIDEVKDILKSG 496

Query: 358 KGKLAVL 364
           +  + VL
Sbjct: 497 ENSVEVL 503


>gi|399498000|emb|CCG20328.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 134/274 (48%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N + DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENGLKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENGLKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L ++  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENGLKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 49/301 (16%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           +G+ G   + + L   + +  LDLR N    EV     GL                 LC 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV-----GL----------------VLC- 347

Query: 543 NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 602
                 K L+      +E LT I L++  + D+GA AIA ALK +   ++  L +A N +
Sbjct: 348 ------KALSN-----HENLTEIYLSYLNLEDEGAIAIANALK-DSAPSLAVLEMAGNDI 395

Query: 603 T 603
           T
Sbjct: 396 T 396


>gi|225432584|ref|XP_002281311.1| PREDICTED: RAN GTPase-activating protein 2 [Vitis vinifera]
          Length = 539

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 136/275 (49%), Gaps = 1/275 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S  +L+ L L  + I +E  + +C+++     +  LQ  +    
Sbjct: 225 NALGEKGVRAFGALLKSQSSLEELYLMNDGISEEAARAVCELIPSTEKLRVLQFHNNMTG 284

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AI+E++K + +L     ++  I   G  +L+EAL   + ++ L L  N  G    
Sbjct: 285 DEGALAISEVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLRDNMFGVEAG 344

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L  +  L E +L   ++ DEG  A+ + L      L V+++  N I+A+ A  +
Sbjct: 345 VALSKALAKHADLTEAYLSYLNLEDEGAVAIANVLKESASALEVMEMAGNDITAEAAPAL 404

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
           A  I   + +  +NL  N++ DEGA +I+ AL+     +  +DL  N +   GA  +AR 
Sbjct: 405 AACIAAKQLITKLNLAENELRDEGAIQISKALEDGHAQLKEVDLSSNFMRRAGARCLARA 464

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           +     +  L++  N I  +G   +  +     N+
Sbjct: 465 VVHKPGLKLLNINGNFISDEGIDEVKSIFNEFPNV 499



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 185/401 (46%), Gaps = 59/401 (14%)

Query: 143 TGKLFRESKQTLNEFAKELRAF--------------------SSVDMSGRNFG------- 175
           T K F E+ +T+ + +K  RAF                    + +  S R+FG       
Sbjct: 114 TSKTFNEACETVFDISKGQRAFVEAEEAEELLRPLKEPGNSYTKICFSNRSFGLGAARVA 173

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           +  L  L + L     ++ ++  + G     +  F   L+  + LK+L+LS N +G++GV
Sbjct: 174 EPILASLKDQLKEVDLSDFIAGRSEGEALEVMAIFSEALEGCV-LKSLDLSNNALGEKGV 232

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           +    +L   + +E L L +  + +E A+A+ EL+ +   LRVL+ +NNM    G  +++
Sbjct: 233 RAFGALLKSQSSLEELYLMNDGISEEAARAVCELIPSTEKLRVLQFHNNMTGDEGALAIS 292

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           E + ++  +     +    G+ G  AL++ L+   +L++L L  N  G E   AL   L 
Sbjct: 293 EVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLRDNMFGVEAGVALSKAL- 351

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                            AK A     Y+           Y+N + DEGA  IA+ LK++ 
Sbjct: 352 -----------------AKHADLTEAYLS----------YLN-LEDEGAVAIANVLKESA 383

Query: 416 T-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNI 473
           + +  +++ GN+I ++ A A+A  +    +IT L+LA N +  +GA  +S+ L+  H  +
Sbjct: 384 SALEVMEMAGNDITAEAAPALAACIAAKQLITKLNLAENELRDEGAIQISKALEDGHAQL 443

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             + L    +  +GA  +A  + +   + +L++  N + DE
Sbjct: 444 KEVDLSSNFMRRAGARCLARAVVHKPGLKLLNINGNFISDE 484



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 40/316 (12%)

Query: 314 GGALGANAL-AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           G AL   A+ ++ LEG   L+ L L  N++G++G+RA  + L S +  L  L + N+ IS
Sbjct: 199 GEALEVMAIFSEALEGC-VLKSLDLSNNALGEKGVRAFGALLKS-QSSLEELYLMNDGIS 256

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + A  V E I + + L  +  + N  GDEGA  I++ +KQ+  +         I S G 
Sbjct: 257 EEAARAVCELIPSTEKLRVLQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGG 316

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            A++  L+  + +  LDL  N  G +   ALS+ L  H ++    L +  +   GA  +A
Sbjct: 317 VALSEALQTFTNLKKLDLRDNMFGVEAGVALSKALAKHADLTEAYLSYLNLEDEGAVAIA 376

Query: 493 DMLRYN-NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
           ++L+ + + + ++++  N                                 +    A   
Sbjct: 377 NVLKESASALEVMEMAGN---------------------------------DITAEAAPA 403

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 611
             +     + +T ++LA NE+RD+GA  I++AL+ +    +  ++L++NF+ + G   L 
Sbjct: 404 LAACIAAKQLITKLNLAENELRDEGAIQISKALE-DGHAQLKEVDLSSNFMRRAGARCL- 461

Query: 612 DAKDLVYEMSEKEVNI 627
            A+ +V++   K +NI
Sbjct: 462 -ARAVVHKPGLKLLNI 476


>gi|399497970|emb|CCG20313.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPPTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+ +
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E +   + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPPTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITVEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPPTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A + K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITVEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|403350347|gb|EJY74632.1| hypothetical protein OXYTRI_04110 [Oxytricha trifallax]
          Length = 630

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 164/349 (46%), Gaps = 36/349 (10%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
            KLF+E     +   + ++  +++++     G   +  L+ +L  N+  E+++ A N I+
Sbjct: 79  AKLFKE-----DLLRRNVKNSNALNLQSLRLGINSIIALSNAL-QNRKYEKLNLADNAIS 132

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
             G+ A   ++ +N  +K+LNL+ N I  EG++   D L+ N  ++ L +  V    EG+
Sbjct: 133 DYGMHAIKNII-NNSGVKSLNLASNMISGEGLELFLDDLIANTNLKHLDIGVV----EGS 187

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
                            +  N +   G   ++  L+ N  I SL +N N  G  G   + 
Sbjct: 188 -----------------MRKNSLGIQGAVCISAMLIRNKVIESLSINDNDLGPDGGECIG 230

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  N++L+ L +  N +  EG   ++   ++    L  L +  N + +     +A+ +
Sbjct: 231 IALSQNETLKVLKVSENDLKSEGAIPIIKSATN----LEHLSLAKNFMKSDVGKPLAKLL 286

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K  K L  + L  N++  +GA+ IA  + QN+T+  ++L GN +   G   I++ L+D  
Sbjct: 287 KASKHLKKLYLEFNELMVQGAKWIAKGISQNKTLEILNLKGNIVGDDGLILISQSLRDAV 346

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            +  LD++ N IG  G ++L +VL +  NI TL    C     G E +A
Sbjct: 347 NLKELDISLNEIGPTGFQSLCDVLPY-SNIQTL---TCNKNFLGDEVLA 391



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 155/317 (48%), Gaps = 26/317 (8%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL    +G   +  L + L  N   E+L L+   + D G  AI  ++ NNS ++ L L 
Sbjct: 97  LNLQSLRLGINSIIALSNAL-QNRKYEKLNLADNAISDYGMHAIKNII-NNSGVKSLNLA 154

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG----------NKSL 332
           +NMI   G     + L+ N+ ++ L + G   G++  N+L  G++G          NK +
Sbjct: 155 SNMISGEGLELFLDDLIANTNLKHLDI-GVVEGSMRKNSL--GIQGAVCISAMLIRNKVI 211

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L ++ N +G +G   +   LS  +  L VL +  N + ++GA  +   IK+  +L  +
Sbjct: 212 ESLSINDNDLGPDGGECIGIALSQNET-LKVLKVSENDLKSEGAIPI---IKSATNLEHL 267

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N +  +  + +A  LK ++ +  + L  N +  +GA  IA+ +  N  +  L+L  
Sbjct: 268 SLAKNFMKSDVGKPLAKLLKASKHLKKLYLEFNELMVQGAKWIAKGISQNKTLEILNLKG 327

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N +G DG   +S+ L+   N+  L +   +IG +G + + D+L Y+N I  L    N L 
Sbjct: 328 NIVGDDGLILISQSLRDAVNLKELDISLNEIGPTGFQSLCDVLPYSN-IQTLTCNKNFLG 386

Query: 513 DEVCSGCNGLSFFHSAI 529
           DEV      L++F + I
Sbjct: 387 DEV------LAYFANII 397



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 34/273 (12%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E S   N +   G      +L  N  +++L+++ N +G +G +C+   L  N  ++ L++
Sbjct: 185 EGSMRKNSLGIQGAVCISAMLIRNKVIESLSINDNDLGPDGGECIGIALSQNETLKVLKV 244

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S  DL+ EGA  I   +K+ + L  L L  N +       LA+ L  +  ++ L+L  N 
Sbjct: 245 SENDLKSEGAIPI---IKSATNLEHLSLAKNFMKSDVGKPLAKLLKASKHLKKLYLEFNE 301

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
               GA  +AKG+  NK+L  L+L GN +GD+G+  +   L      L  LDI  N I  
Sbjct: 302 LMVQGAKWIAKGISQNKTLEILNLKGNIVGDDGLILISQSLRDAVN-LKELDISLNEIGP 360

Query: 374 KGAFHVAEYIKNCKSLLWINLYM-----NDIGDE-------------GAEKI------AD 409
            G   +      C  L + N+       N +GDE              A K+      + 
Sbjct: 361 TGFQSL------CDVLPYSNIQTLTCNKNFLGDEVLAYFANIISDPQNASKLKKFDFSSQ 414

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            L +N ++  I+L GN       + I ++ + N
Sbjct: 415 TLNKNTSLIDIELKGNRFSHSCLTKIKKITQRN 447


>gi|344923498|ref|ZP_08776959.1| hypothetical protein COdytL_02475 [Candidatus Odyssella
           thessalonicensis L13]
          Length = 576

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 4/241 (1%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           + L  L L  N +GD G+ A+   L++    L  L + +N IS +G   +   +   K L
Sbjct: 288 QKLTSLTLKTNKLGDSGVMAIAEMLTTNHS-LVSLTLEHNEISPQGVEALVTALVTNKHL 346

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L  N I ++GAE +A  ++ N TI  ++LG   +  +G  +I+  L+ NS +T L+
Sbjct: 347 TLLDLSRNKINNQGAEALAMLIQNNATIKALELGRCGLTGEGIMSISASLRSNSSLTKLN 406

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L +N IG  GA  L++ ++    +  LKL + +IG  G + +A  +  N+ ++ LDL  N
Sbjct: 407 LNHNSIGYKGASGLAQAIQLSPPLQELKLMFTEIGEDGLQEIAAAVAINSKLTSLDLAFN 466

Query: 510 GLRDE-VCSGCNGLSFFHSAIY-SLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDL 567
              D  + +  N +S   +  + +L+ +  +S    YL+  K LA + K VN +L S+ +
Sbjct: 467 NSEDRSITAFTNTISTNKTLTHLNLRSLNRFSDAKVYLEAIKVLANAIK-VNTSLLSLGI 525

Query: 568 A 568
           +
Sbjct: 526 S 526



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 7/237 (2%)

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
           Q    ++   N +  +G+ A   +L +N +L +L L  N I  +GV+ L   LV N  + 
Sbjct: 288 QKLTSLTLKTNKLGDSGVMAIAEMLTTNHSLVSLTLEHNEISPQGVEALVTALVTNKHLT 347

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L LS   + ++GA+A+A L++NN+ ++ LEL    +   G  S++ +L  NS++  L+L
Sbjct: 348 LLDLSRNKINNQGAEALAMLIQNNATIKALELGRCGLTGEGIMSISASLRSNSSLTKLNL 407

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           N N  G  GA+ LA+ ++ +  L+EL L    IG++G++ + + ++    KL  LD+  N
Sbjct: 408 NHNSIGYKGASGLAQAIQLSPPLQELKLMFTEIGEDGLQEIAAAVAI-NSKLTSLDLAFN 466

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLY-MNDIGD-----EGAEKIADALKQNRTITTI 420
           +   +        I   K+L  +NL  +N   D     E  + +A+A+K N ++ ++
Sbjct: 467 NSEDRSITAFTNTISTNKTLTHLNLRSLNRFSDAKVYLEAIKVLANAIKVNTSLLSL 523



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 99/197 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+ +     GD G+  +AE L  N +   ++   N I+  G++A    L +N  L 
Sbjct: 288 QKLTSLTLKTNKLGDSGVMAIAEMLTTNHSLVSLTLEHNEISPQGVEALVTALVTNKHLT 347

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+LS N I ++G + L  ++ +NA ++ L+L    L  EG  +I+  L++NS L  L L
Sbjct: 348 LLDLSRNKINNQGAEALAMLIQNNATIKALELGRCGLTGEGIMSISASLRSNSSLTKLNL 407

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           N+N I Y G + LA+A+  +  ++ L L     G  G   +A  +  N  L  L L  N+
Sbjct: 408 NHNSIGYKGASGLAQAIQLSPPLQELKLMFTEIGEDGLQEIAAAVAINSKLTSLDLAFNN 467

Query: 342 IGDEGIRALMSGLSSRK 358
             D  I A  + +S+ K
Sbjct: 468 SEDRSITAFTNTISTNK 484



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 127/270 (47%), Gaps = 20/270 (7%)

Query: 336 HLHGNSIGDEGIRA-----LMSGLSSRKGKLAVLDIGNNSIS--AKGAFHVAEYIKNCKS 388
           HL   +I D  + A     ++SG  S   KL  L I    I+  A    +VA + K    
Sbjct: 234 HLISLTIEDVCMDAAEALCVLSGKISTHEKLRSLRIFRTPINFNAPNNINVAAFQK---- 289

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  + L  N +GD G   IA+ L  N ++ ++ L  N I  +G  A+   L  N  +T L
Sbjct: 290 LTSLTLKTNKLGDSGVMAIAEMLTTNHSLVSLTLEHNEISPQGVEALVTALVTNKHLTLL 349

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL+ N I   GA+AL+ +++ +  I  L+LG C +   G   ++  LR N++++ L+L  
Sbjct: 350 DLSRNKINNQGAEALAMLIQNNATIKALELGRCGLTGEGIMSISASLRSNSSLTKLNLNH 409

Query: 509 NGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQG-AKCLAQSFKVVNEALTSIDL 567
           N +  +  SG          +  LK ++F  +  + LQ  A  +A     +N  LTS+DL
Sbjct: 410 NSIGYKGASGLAQAIQLSPPLQELK-LMFTEIGEDGLQEIAAAVA-----INSKLTSLDL 463

Query: 568 AFNEIRDDGAFAIAQALKANEDVAVTSLNL 597
           AFN   D    A    +  N+   +T LNL
Sbjct: 464 AFNNSEDRSITAFTNTISTNK--TLTHLNL 491



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 71/148 (47%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+S     ++G   LA  +  N T + +     G+T  GI +    L+SN +L 
Sbjct: 344 KHLTLLDLSRNKINNQGAEALAMLIQNNATIKALELGRCGLTGEGIMSISASLRSNSSLT 403

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL+ N IG +G   L   +  +  ++ L+L   ++ ++G + IA  +  NS L  L+L
Sbjct: 404 KLNLNHNSIGYKGASGLAQAIQLSPPLQELKLMFTEIGEDGLQEIAAAVAINSKLTSLDL 463

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHL 309
             N  +    T+    +  N T+  L+L
Sbjct: 464 AFNNSEDRSITAFTNTISTNKTLTHLNL 491



 Score = 45.4 bits (106), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 6/199 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  S+ +       +G+  L  +L  N+    +  + N I   G +A   ++Q+N  +K
Sbjct: 316 HSLVSLTLEHNEISPQGVEALVTALVTNKHLTLLDLSRNKINNQGAEALAMLIQNNATIK 375

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L    +  EG+  +   L  N+ + +L L+   +  +GA  +A+ ++ +  L+ L+L
Sbjct: 376 ALELGRCGLTGEGIMSISASLRSNSSLTKLNLNHNSIGYKGASGLAQAIQLSPPLQELKL 435

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG-N 340
               I   G   +A A+  NS + SL L  N        A    +  NK+L  L+L   N
Sbjct: 436 MFTEIGEDGLQEIAAAVAINSKLTSLDLAFNNSEDRSITAFTNTISTNKTLTHLNLRSLN 495

Query: 341 SIGD-----EGIRALMSGL 354
              D     E I+ L + +
Sbjct: 496 RFSDAKVYLEAIKVLANAI 514


>gi|403349489|gb|EJY74184.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 1258

 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 18/342 (5%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKAFDGVLQSNIAL 220
           +D S  +  +EG  +L +SL +NQ+  ++  ++      N I A G++    VL  N  L
Sbjct: 453 LDFSTNDMTNEGSDYLFKSLLHNQSLIDLDISSREGRFRNRIQAKGVEMLRQVLIHNPFL 512

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD--NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           + LNL+GN I +EGVK LC  ++   +  +  L ++  ++      ++ +LL  +++LR+
Sbjct: 513 QILNLAGNAIKNEGVKVLCQAILQSTHKSLISLDIAENEITHTACDSLHKLLLESNLLRI 572

Query: 279 LELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L  N +   G   ++ AL    S +  L+L       LG   +   ++ N  L+ L L
Sbjct: 573 -NLKGNNLGNPGAEKISHALYFSRSKLTYLNLASCQLLYLGIIKVLDAVKHNYQLQTLIL 631

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N  G      LMS L S+   L  L + N SI    A  + + + N   L  +NL  N
Sbjct: 632 DDNKAGKGQSFQLMSSLMSQNRSLVHLSLQNLSIDDSLAIPLGDGLHNNTRLKSLNLSFN 691

Query: 398 DIGDEGAEKIADALK-----QNRT---ITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
            IG+EGA  IA+AL       N+T   +  ++L  N+I   G   I ++++ N  +  L 
Sbjct: 692 SIGNEGAASIANALSYKGNTSNQTYNGLRELNLSHNDIGEDGGLQICKMIQSNKALLKLQ 751

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           L+YN IG    + L + +  +  +  + L   Q+     EFV
Sbjct: 752 LSYNNIGDLSGQELIKSINDNDKVEMIDLQNNQMNLRYVEFV 793



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 164/358 (45%), Gaps = 18/358 (5%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N G +    LA+ +  N    +   + N +   GIK     L     +  L+ S N + +
Sbjct: 403 NLGPKSAKILADLIIRNAQFSQFILSDNFMGNEGIKHLSDALTRQNHIIRLDFSTNDMTN 462

Query: 233 EGVKCLCDILVDNAGVERLQLSSVD------LRDEGAKAIAELLKNNSILRVLELNNNMI 286
           EG   L   L+ N  +  L +SS +      ++ +G + + ++L +N  L++L L  N I
Sbjct: 463 EGSDYLFKSLLHNQSLIDLDISSREGRFRNRIQAKGVEMLRQVLIHNPFLQILNLAGNAI 522

Query: 287 DYSGFTSLAEALLENS--TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
              G   L +A+L+++  ++ SL +  N       ++L K L  +  LR ++L GN++G+
Sbjct: 523 KNEGVKVLCQAILQSTHKSLISLDIAENEITHTACDSLHKLLLESNLLR-INLKGNNLGN 581

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD-EG 403
            G   +   L   + KL  L++ +  +   G   V + +K+   L  + L  N  G  + 
Sbjct: 582 PGAEKISHALYFSRSKLTYLNLASCQLLYLGIIKVLDAVKHNYQLQTLILDDNKAGKGQS 641

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            + ++  + QNR++  + L   +I    A  +   L +N+ + SL+L++N IG +GA ++
Sbjct: 642 FQLMSSLMSQNRSLVHLSLQNLSIDDSLAIPLGDGLHNNTRLKSLNLSFNSIGNEGAASI 701

Query: 464 SEVLKFHGN--------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           +  L + GN        +  L L    IG  G   +  M++ N  +  L L  N + D
Sbjct: 702 ANALSYKGNTSNQTYNGLRELNLSHNDIGEDGGLQICKMIQSNKALLKLQLSYNNIGD 759



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 179/389 (46%), Gaps = 41/389 (10%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLEL 281
           L L+   +G +  K L D+++ NA   +  LS   + +EG K +++ L + N I+R L+ 
Sbjct: 397 LKLNNFNLGPKSAKILADLIIRNAQFSQFILSDNFMGNEGIKHLSDALTRQNHIIR-LDF 455

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG------GALGANALAKGLEGNKSLREL 335
           + N +   G   L ++LL N ++  L ++   G       A G   L + L  N  L+ L
Sbjct: 456 STNDMTNEGSDYLFKSLLHNQSLIDLDISSREGRFRNRIQAKGVEMLRQVLIHNPFLQIL 515

Query: 336 HLHGNSIGDEGIRALMSG-LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           +L GN+I +EG++ L    L S    L  LDI  N I+      + + +    +LL INL
Sbjct: 516 NLAGNAIKNEGVKVLCQAILQSTHKSLISLDIAENEITHTACDSLHKLLLES-NLLRINL 574

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N++G+ GAEKI+ AL  +R+ +T ++L    +   G   +   +K N  + +L L  N
Sbjct: 575 KGNNLGNPGAEKISHALYFSRSKLTYLNLASCQLLYLGIIKVLDAVKHNYQLQTLILDDN 634

Query: 454 PIGADGA-KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
             G   + + +S ++  + ++  L L    I  S A  + D L  N  +  L+L  N + 
Sbjct: 635 KAGKGQSFQLMSSLMSQNRSLVHLSLQNLSIDDSLAIPLGDGLHNNTRLKSLNLSFNSIG 694

Query: 513 DE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
           +E   S  N LS+                            Q++      L  ++L+ N+
Sbjct: 695 NEGAASIANALSY----------------------KGNTSNQTY----NGLRELNLSHND 728

Query: 572 IRDDGAFAIAQALKANEDVAVTSLNLANN 600
           I +DG   I + +++N+  A+  L L+ N
Sbjct: 729 IGEDGGLQICKMIQSNK--ALLKLQLSYN 755



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 146/331 (44%), Gaps = 35/331 (10%)

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS+   L+LNN  +       LA+ ++ N+      L+ N+ G  G   L+  L     +
Sbjct: 391 NSMNGKLKLNNFNLGPKSAKILADLIIRNAQFSQFILSDNFMGNEGIKHLSDALTRQNHI 450

Query: 333 RELHLHGNSIGDEGIRALMSGL-----------SSRKGKLAVLDIGNNSISAKGAFHVAE 381
             L    N + +EG   L   L           SSR+G+        N I AKG   + +
Sbjct: 451 IRLDFSTNDMTNEGSDYLFKSLLHNQSLIDLDISSREGRFR------NRIQAKGVEMLRQ 504

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVL 439
            + +   L  +NL  N I +EG + +  A+ Q  ++++ ++D+  N I      ++ ++L
Sbjct: 505 VLIHNPFLQILNLAGNAIKNEGVKVLCQAILQSTHKSLISLDIAENEITHTACDSLHKLL 564

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYN 498
            +++++  ++L  N +G  GA+ +S  L F    +  L L  CQ+   G   V D +++N
Sbjct: 565 LESNLLR-INLKGNNLGNPGAEKISHALYFSRSKLTYLNLASCQLLYLGIIKVLDAVKHN 623

Query: 499 NTISILDLRANGLRDEVCSGCNGLSF-----FHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
             +  L L  N           G SF       S   SL H+   +L I+    A  L  
Sbjct: 624 YQLQTLILDDN-------KAGKGQSFQLMSSLMSQNRSLVHLSLQNLSIDD-SLAIPLGD 675

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                N  L S++L+FN I ++GA +IA AL
Sbjct: 676 GLH-NNTRLKSLNLSFNSIGNEGAASIANAL 705



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 33/260 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           L + N ++  K A  +A+ I +N +   +I L  N +G+EG + ++DAL +   I  +D 
Sbjct: 397 LKLNNFNLGPKSAKILADLIIRNAQFSQFI-LSDNFMGNEGIKHLSDALTRQNHIIRLDF 455

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N++ ++G+  + + L  N  +  LD++            S   +F            +
Sbjct: 456 STNDMTNEGSDYLFKSLLHNQSLIDLDIS------------SREGRFRN----------R 493

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           I A G E +  +L +N  + IL+L  N +++E      G+     AI    H    SL I
Sbjct: 494 IQAKGVEMLRQVLIHNPFLQILNLAGNAIKNE------GVKVLCQAILQSTHKSLISLDI 547

Query: 543 --NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
             N +    C +    ++   L  I+L  N + + GA  I+ AL  +    +T LNLA+ 
Sbjct: 548 AENEITHTACDSLHKLLLESNLLRINLKGNNLGNPGAEKISHALYFSRS-KLTYLNLASC 606

Query: 601 FLTKFGQSALTDAKDLVYEM 620
            L   G   + DA    Y++
Sbjct: 607 QLLYLGIIKVLDAVKHNYQL 626



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 20/124 (16%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+++S  + G+EG   +A +L Y            G T+   + ++G       L+ L
Sbjct: 683 LKSLNLSFNSIGNEGAASIANALSY-----------KGNTSN--QTYNG-------LREL 722

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N IG++G   +C ++  N  + +LQLS  ++ D   + + + + +N  + +++L N
Sbjct: 723 NLSHNDIGEDGGLQICKMIQSNKALLKLQLSYNNIGDLSGQELIKSINDNDKVEMIDLQN 782

Query: 284 NMID 287
           N ++
Sbjct: 783 NQMN 786


>gi|291394610|ref|XP_002713781.1| PREDICTED: nucleotide-binding oligomerization domain containing 1
           [Oryctolagus cuniculus]
          Length = 953

 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 37/251 (14%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S     L V+ +  N I+  G   + E +   K L ++ LY N I D GA+
Sbjct: 719 GVRELQPCFSC----LTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAK 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R++T I LG N I S+G   +A  +K +S I  + +  N IG +GAKA +E
Sbjct: 775 YVAKILDECRSLTHIKLGKNKITSEGGKCLALAVKHSSSIVDIGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFF 525
            L+ H ++  L L +  I + G   +A  L  N ++ I  L  N L D+V          
Sbjct: 835 ALRNHTSLRNLSLAFNGITSEGGRSLAQALHCNTSLQIFWLTKNELNDDV---------- 884

Query: 526 HSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 585
                                 A+ +A   K VN+ L  + L  N+I   G   +A+AL+
Sbjct: 885 ----------------------AESMADMLK-VNQTLKHLWLIQNQITARGTAQLAEALR 921

Query: 586 ANEDVAVTSLN 596
            N  +    LN
Sbjct: 922 QNTGILEICLN 932



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 1/207 (0%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L  + LS N I D GVK LC+ L     +  L L +  + D GAK +A++L     L  
Sbjct: 729 CLTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAKYVAKILDECRSLTH 788

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++L  N I   G   LA A+  +S+I  + + GN  G  GA A A+ L  + SLR L L 
Sbjct: 789 IKLGKNKITSEGGKCLALAVKHSSSIVDIGMWGNQIGDEGAKAFAEALRNHTSLRNLSLA 848

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I  EG R+L   L      L +  +  N ++   A  +A+ +K  ++L  + L  N 
Sbjct: 849 FNGITSEGGRSLAQALHCNTS-LQIFWLTKNELNDDVAESMADMLKVNQTLKHLWLIQNQ 907

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGN 425
           I   G  ++A+AL+QN  I  I L GN
Sbjct: 908 ITARGTAQLAEALRQNTGILEICLNGN 934



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 5/205 (2%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I  SG   L E L +   +  L L  N    +GA  +AK 
Sbjct: 720 VRELQPCFSCLTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAKYVAKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG--NNSISAKGAFHVAEYI 383
           L+  +SL  + L  N I  EG + L   +   K   +++DIG   N I  +GA   AE +
Sbjct: 780 LDECRSLTHIKLGKNKITSEGGKCLALAV---KHSSSIVDIGMWGNQIGDEGAKAFAEAL 836

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +N  SL  ++L  N I  EG   +A AL  N ++    L  N ++   A ++A +LK N 
Sbjct: 837 RNHTSLRNLSLAFNGITSEGGRSLAQALHCNTSLQIFWLTKNELNDDVAESMADMLKVNQ 896

Query: 444 VITSLDLAYNPIGADGAKALSEVLK 468
            +  L L  N I A G   L+E L+
Sbjct: 897 TLKHLWLIQNQITARGTAQLAEALR 921



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 95/215 (44%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           + E        + V +S     D G+  L E L   +    +    N IT  G K    +
Sbjct: 720 VRELQPCFSCLTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAKYVAKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L    +L  + L  N I  EG KCL   +  ++ +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECRSLTHIKLGKNKITSEGGKCLALAVKHSSSIVDIGMWGNQIGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + LR L L  N I   G  SLA+AL  N++++   L  N      A ++A  L+ N++L+
Sbjct: 840 TSLRNLSLAFNGITSEGGRSLAQALHCNTSLQIFWLTKNELNDDVAESMADMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I   G   L   L    G L +   GN
Sbjct: 900 HLWLIQNQITARGTAQLAEALRQNTGILEICLNGN 934



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 91/189 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  + + +      D G  ++A+ L   ++   +    N IT+ G K   
Sbjct: 746 KVLCEELTKYKILTYLGLYNNQITDVGAKYVAKILDECRSLTHIKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++ + ++  + + GN IGDEG K   + L ++  +  L L+   +  EG +++A+ L 
Sbjct: 806 LAVKHSSSIVDIGMWGNQIGDEGAKAFAEALRNHTSLRNLSLAFNGITSEGGRSLAQALH 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L++  L  N ++     S+A+ L  N T++ L L  N   A G   LA+ L  N  
Sbjct: 866 CNTSLQIFWLTKNELNDDVAESMADMLKVNQTLKHLWLIQNQITARGTAQLAEALRQNTG 925

Query: 332 LRELHLHGN 340
           + E+ L+GN
Sbjct: 926 ILEICLNGN 934


>gi|403334585|gb|EJY66456.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 1300

 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 18/342 (5%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKAFDGVLQSNIAL 220
           +D S  +  +EG  +L +SL +NQ+  ++  ++      N I A G++    VL  N  L
Sbjct: 495 LDFSTNDMTNEGSDYLFKSLLHNQSLIDLDISSREGRFRNRIQAKGVEMLRQVLIHNPFL 554

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD--NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           + LNL+GN I +EGVK LC  ++   +  +  L ++  ++      ++ +LL  +++LR+
Sbjct: 555 QILNLAGNAIKNEGVKVLCQAILQSTHKSLISLDIAENEITHTACDSLHKLLLESNLLRI 614

Query: 279 LELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L  N +   G   ++ AL    S +  L+L       LG   +   ++ N  L+ L L
Sbjct: 615 -NLKGNNLGNPGAEKISHALYFSRSKLTYLNLASCQLLYLGIIKVLDAVKHNYQLQTLIL 673

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N  G      LMS L S+   L  L + N SI    A  + + + N   L  +NL  N
Sbjct: 674 DDNKAGKGQSFQLMSSLMSQNRSLVHLSLQNLSIDDSLAIPLGDGLHNNTRLKSLNLSFN 733

Query: 398 DIGDEGAEKIADALK-----QNRT---ITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
            IG+EGA  IA+AL       N+T   +  ++L  N+I   G   I ++++ N  +  L 
Sbjct: 734 SIGNEGAASIANALSYKGNTSNQTYNGLRELNLSHNDIGEDGGLQICKMIQSNKALLKLQ 793

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           L+YN IG    + L + +  +  +  + L   Q+     EFV
Sbjct: 794 LSYNNIGDLSGQELIKSINDNDKVEMIDLQNNQMNLRYVEFV 835



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 164/358 (45%), Gaps = 18/358 (5%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N G +    LA+ +  N    +   + N +   GIK     L     +  L+ S N + +
Sbjct: 445 NLGPKSAKILADLIIRNAQFSQFILSDNFMGNEGIKHLSDALTRQNHIIRLDFSTNDMTN 504

Query: 233 EGVKCLCDILVDNAGVERLQLSSVD------LRDEGAKAIAELLKNNSILRVLELNNNMI 286
           EG   L   L+ N  +  L +SS +      ++ +G + + ++L +N  L++L L  N I
Sbjct: 505 EGSDYLFKSLLHNQSLIDLDISSREGRFRNRIQAKGVEMLRQVLIHNPFLQILNLAGNAI 564

Query: 287 DYSGFTSLAEALLENS--TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
              G   L +A+L+++  ++ SL +  N       ++L K L  +  LR ++L GN++G+
Sbjct: 565 KNEGVKVLCQAILQSTHKSLISLDIAENEITHTACDSLHKLLLESNLLR-INLKGNNLGN 623

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD-EG 403
            G   +   L   + KL  L++ +  +   G   V + +K+   L  + L  N  G  + 
Sbjct: 624 PGAEKISHALYFSRSKLTYLNLASCQLLYLGIIKVLDAVKHNYQLQTLILDDNKAGKGQS 683

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            + ++  + QNR++  + L   +I    A  +   L +N+ + SL+L++N IG +GA ++
Sbjct: 684 FQLMSSLMSQNRSLVHLSLQNLSIDDSLAIPLGDGLHNNTRLKSLNLSFNSIGNEGAASI 743

Query: 464 SEVLKFHGN--------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           +  L + GN        +  L L    IG  G   +  M++ N  +  L L  N + D
Sbjct: 744 ANALSYKGNTSNQTYNGLRELNLSHNDIGEDGGLQICKMIQSNKALLKLQLSYNNIGD 801



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 176/382 (46%), Gaps = 41/382 (10%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDY 288
           +G +  K L D+++ NA   +  LS   + +EG K +++ L + N I+R L+ + N +  
Sbjct: 446 LGPKSAKILADLIIRNAQFSQFILSDNFMGNEGIKHLSDALTRQNHIIR-LDFSTNDMTN 504

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYG------GALGANALAKGLEGNKSLRELHLHGNSI 342
            G   L ++LL N ++  L ++   G       A G   L + L  N  L+ L+L GN+I
Sbjct: 505 EGSDYLFKSLLHNQSLIDLDISSREGRFRNRIQAKGVEMLRQVLIHNPFLQILNLAGNAI 564

Query: 343 GDEGIRALMSG-LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            +EG++ L    L S    L  LDI  N I+      + + +    +LL INL  N++G+
Sbjct: 565 KNEGVKVLCQAILQSTHKSLISLDIAENEITHTACDSLHKLLLES-NLLRINLKGNNLGN 623

Query: 402 EGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            GAEKI+ AL  +R+ +T ++L    +   G   +   +K N  + +L L  N  G   +
Sbjct: 624 PGAEKISHALYFSRSKLTYLNLASCQLLYLGIIKVLDAVKHNYQLQTLILDDNKAGKGQS 683

Query: 461 -KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE-VCSG 518
            + +S ++  + ++  L L    I  S A  + D L  N  +  L+L  N + +E   S 
Sbjct: 684 FQLMSSLMSQNRSLVHLSLQNLSIDDSLAIPLGDGLHNNTRLKSLNLSFNSIGNEGAASI 743

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 578
            N LS+                            Q++      L  ++L+ N+I +DG  
Sbjct: 744 ANALSY----------------------KGNTSNQTY----NGLRELNLSHNDIGEDGGL 777

Query: 579 AIAQALKANEDVAVTSLNLANN 600
            I + +++N+  A+  L L+ N
Sbjct: 778 QICKMIQSNK--ALLKLQLSYN 797



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 146/331 (44%), Gaps = 35/331 (10%)

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS+   L+LNN  +       LA+ ++ N+      L+ N+ G  G   L+  L     +
Sbjct: 433 NSMNGKLKLNNFNLGPKSAKILADLIIRNAQFSQFILSDNFMGNEGIKHLSDALTRQNHI 492

Query: 333 RELHLHGNSIGDEGIRALMSGL-----------SSRKGKLAVLDIGNNSISAKGAFHVAE 381
             L    N + +EG   L   L           SSR+G+        N I AKG   + +
Sbjct: 493 IRLDFSTNDMTNEGSDYLFKSLLHNQSLIDLDISSREGRFR------NRIQAKGVEMLRQ 546

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVL 439
            + +   L  +NL  N I +EG + +  A+ Q  ++++ ++D+  N I      ++ ++L
Sbjct: 547 VLIHNPFLQILNLAGNAIKNEGVKVLCQAILQSTHKSLISLDIAENEITHTACDSLHKLL 606

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYN 498
            +++++  ++L  N +G  GA+ +S  L F    +  L L  CQ+   G   V D +++N
Sbjct: 607 LESNLLR-INLKGNNLGNPGAEKISHALYFSRSKLTYLNLASCQLLYLGIIKVLDAVKHN 665

Query: 499 NTISILDLRANGLRDEVCSGCNGLSF-----FHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
             +  L L  N           G SF       S   SL H+   +L I+    A  L  
Sbjct: 666 YQLQTLILDDN-------KAGKGQSFQLMSSLMSQNRSLVHLSLQNLSIDD-SLAIPLGD 717

Query: 554 SFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 584
                N  L S++L+FN I ++GA +IA AL
Sbjct: 718 GLH-NNTRLKSLNLSFNSIGNEGAASIANAL 747



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 33/260 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           L + N ++  K A  +A+ I +N +   +I L  N +G+EG + ++DAL +   I  +D 
Sbjct: 439 LKLNNFNLGPKSAKILADLIIRNAQFSQFI-LSDNFMGNEGIKHLSDALTRQNHIIRLDF 497

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N++ ++G+  + + L  N  +  LD++            S   +F            +
Sbjct: 498 STNDMTNEGSDYLFKSLLHNQSLIDLDIS------------SREGRFRN----------R 535

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCI 542
           I A G E +  +L +N  + IL+L  N +++E      G+     AI    H    SL I
Sbjct: 536 IQAKGVEMLRQVLIHNPFLQILNLAGNAIKNE------GVKVLCQAILQSTHKSLISLDI 589

Query: 543 --NYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 600
             N +    C +    ++   L  I+L  N + + GA  I+ AL  +    +T LNLA+ 
Sbjct: 590 AENEITHTACDSLHKLLLESNLLRINLKGNNLGNPGAEKISHALYFSRS-KLTYLNLASC 648

Query: 601 FLTKFGQSALTDAKDLVYEM 620
            L   G   + DA    Y++
Sbjct: 649 QLLYLGIIKVLDAVKHNYQL 668



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 20/124 (16%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+++S  + G+EG   +A +L Y            G T+   + ++G       L+ L
Sbjct: 725 LKSLNLSFNSIGNEGAASIANALSY-----------KGNTSN--QTYNG-------LREL 764

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N IG++G   +C ++  N  + +LQLS  ++ D   + + + + +N  + +++L N
Sbjct: 765 NLSHNDIGEDGGLQICKMIQSNKALLKLQLSYNNIGDLSGQELIKSINDNDKVEMIDLQN 824

Query: 284 NMID 287
           N ++
Sbjct: 825 NQMN 828


>gi|399497854|emb|CCG20255.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497862|emb|CCG20259.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 28/277 (10%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAE-----ALLEN-----------------------STIRSLHLNG 311
             +NNM    G  ++AE      LLE+                       S ++ L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRD 335

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I
Sbjct: 336 NMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDI 395

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           +A+ A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   G
Sbjct: 396 TAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAG 455

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           A  +A+ +        L++  N I  +G   L E+ K
Sbjct: 456 ARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +    
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAP 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 28/274 (10%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EA    S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD--------- 365
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL+         
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 366 -------------------IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
                              +G N +  +GA  +A+ ++    L+ +++  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           +A  +        +++ GN I  +G   +  + K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 29/205 (14%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G             LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-------------------- 274
              LC  L ++  +  + LS ++L DEGA AIA  LK+++                    
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 275 ---------ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
                    +L  L L  N +   G   +A+AL  +S +  + ++ N     GA  LA+ 
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 326 LEGNKSLRELHLHGNSIGDEGIRAL 350
           +      + L+++GN I +EG+  L
Sbjct: 463 VLHKDEFKLLNVNGNFISEEGVDEL 487


>gi|340376949|ref|XP_003386993.1| PREDICTED: hypothetical protein LOC100641680 [Amphimedon
           queenslandica]
          Length = 856

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 6/278 (2%)

Query: 197 FAANGITAAGIKAFDGVLQS-NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
            + N IT  G++     ++     L+ L+LS N I  +G+  + D L  N  ++ + L  
Sbjct: 549 LSYNRITDKGVEHIAQYIKEVKCPLQHLDLSYNDISVDGIALIADALQFNTSLQHVSLDG 608

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             L  +G   +A +L+ N+ L  L L+N  +      ++A  L  N TI+ L L+     
Sbjct: 609 NLLEKKGGLDLAAMLQVNTTLTHLTLSNTHLHTDCIIAMATVLHGNQTIQCLDLSRPLVH 668

Query: 316 ALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL-SSRKGKLAVLDIGNNSI 371
           +    +   ++K L+ + +L+E+HL  + + D G++ + + L  +    L  LD+  N +
Sbjct: 669 SCLEESTIHISKMLKISCTLKEIHLSKHDMTDTGVKWMATCLMENPNSSLTHLDLSCNKL 728

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSK 430
           S  GA H+AE++     L  +NL  N I  EG   +++AL+  N  + ++ +  N+IH  
Sbjct: 729 SRDGASHIAEFLLTNPPLEVLNLSCNRIESEGLISLSNALQSGNNRLKSLLVISNDIHDA 788

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           G  A+A +++ NSV++ L +  N        A  E+LK
Sbjct: 789 GLLAVANLMQVNSVLSQLHIWGNKWTTPTCDAFRELLK 826



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 144/331 (43%), Gaps = 58/331 (17%)

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
           +Y    S+     ++    SLHLNGN                  SLRE       + D+ 
Sbjct: 491 NYEAIRSIVATENQSEANSSLHLNGNQA----------------SLRE-----KRLNDQD 529

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK-SLLWINLYMNDIGDEGAE 405
           +  L   L      L  L +  N I+ KG  H+A+YIK  K  L  ++L  NDI  +G  
Sbjct: 530 VEVLSHCLIDGSVILLSLVLSYNRITDKGVEHIAQYIKEVKCPLQHLDLSYNDISVDGIA 589

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IADAL+ N ++  + L GN +  KG   +A +L+ N+ +T L L+   +  D   A++ 
Sbjct: 590 LIADALQFNTSLQHVSLDGNLLEKKGGLDLAAMLQVNTTLTHLTLSNTHLHTDCIIAMAT 649

Query: 466 VLKFHGNINTLKLGWCQIGASGAE---FVADMLRYNNTISILDLRANGLRDEVCSGCNGL 522
           VL  +  I  L L    + +   E    ++ ML+ + T+  + L  + + D       G+
Sbjct: 650 VLHGNQTIQCLDLSRPLVHSCLEESTIHISKMLKISCTLKEIHLSKHDMTD------TGV 703

Query: 523 SFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 582
            +                       A CL ++    N +LT +DL+ N++  DGA  IA+
Sbjct: 704 KWM----------------------ATCLMEN---PNSSLTHLDLSCNKLSRDGASHIAE 738

Query: 583 ALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
            L  N  + V  LNL+ N +   G  +L++A
Sbjct: 739 FLLTNPPLEV--LNLSCNRIESEGLISLSNA 767



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 144/319 (45%), Gaps = 35/319 (10%)

Query: 156 EFAKELRA-FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           ++ KE++     +D+S  +   +G+  +A++L +N + + VS   N +   G      +L
Sbjct: 564 QYIKEVKCPLQHLDLSYNDISVDGIALIADALQFNTSLQHVSLDGNLLEKKGGLDLAAML 623

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR---DEGAKAIAELLK 271
           Q N  L  L LS   +  + +  +  +L  N  ++ L LS   +    +E    I+++LK
Sbjct: 624 QVNTTLTHLTLSNTHLHTDCIIAMATVLHGNQTIQCLDLSRPLVHSCLEESTIHISKMLK 683

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLEN--STIRSLHLNGNYGGALGANALAKGLEGN 329
            +  L+ + L+ + +  +G   +A  L+EN  S++  L L+ N     GA+ +A+ L  N
Sbjct: 684 ISCTLKEIHLSKHDMTDTGVKWMATCLMENPNSSLTHLDLSCNKLSRDGASHIAEFLLTN 743

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             L  L+L  N I  EG+ +L + L S          GNN +               KSL
Sbjct: 744 PPLEVLNLSCNRIESEGLISLSNALQS----------GNNRL---------------KSL 778

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           L I+   NDI D G   +A+ ++ N  ++ + + GN   +    A   +LK   +    D
Sbjct: 779 LVIS---NDIHDAGLLAVANLMQVNSVLSQLHIWGNKWTTPTCDAFRELLKTGRLQPG-D 834

Query: 450 LAYNPIGADGAKALSEVLK 468
           +  N    DG   L+  L+
Sbjct: 835 IDVNFYEVDGVTLLARTLQ 853


>gi|326674350|ref|XP_693750.5| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like
           [Danio rerio]
          Length = 951

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 145/276 (52%), Gaps = 10/276 (3%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDY 288
           + DE ++ L  +L   A     +L    + D+G   +A  L++N S L+ L+L+ N +++
Sbjct: 608 LPDESLQRLQPVL---AASRTAKLEFCGVSDKGCDFLASALRSNPSHLKALDLSGNTLNF 664

Query: 289 SGFTSL-AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEG 346
           +G  +L AE    +  ++ L L       +G +ALA  L  + S L EL+L GN +GD G
Sbjct: 665 TGLKNLLAEFQKPHCKLQRLCLRLCGLTDVGCDALASVLRSDPSHLTELNLSGNKLGDLG 724

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAE 405
           ++ L  GL +   KL +L +G+ SI+ +G   +A  ++ N   L  ++L  N + + G +
Sbjct: 725 MKLLAGGLQNPHCKLQILRLGDCSITHEGCAALASALRSNPSHLRELDLSGNKLNNAGVQ 784

Query: 406 KIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKAL 463
            ++  L+  +  +  + L G NI   G +A+A VL+ N S +  LDL++N + + G + L
Sbjct: 785 ILSGELENPDCNLEILRLTGCNISENGCAALASVLRSNPSYLRDLDLSHNDLRSSGVRLL 844

Query: 464 SEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           S  L K    +  L+L +C+I   G   +A  L+ N
Sbjct: 845 SSALEKPDCKLEILRLEYCKITDDGCAVLASALKSN 880



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 8/234 (3%)

Query: 164 FSSVDMSGRNFGDEGLF-FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LK 221
             ++D+SG      GL   LAE    +   + +     G+T  G  A   VL+S+ + L 
Sbjct: 652 LKALDLSGNTLNFTGLKNLLAEFQKPHCKLQRLCLRLCGLTDVGCDALASVLRSDPSHLT 711

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVL 279
            LNLSGN +GD G+K L   L + +  ++ L+L    +  EG  A+A  L++N S LR L
Sbjct: 712 ELNLSGNKLGDLGMKLLAGGLQNPHCKLQILRLGDCSITHEGCAALASALRSNPSHLREL 771

Query: 280 ELNNNMIDYSGFTSLAEALLENS--TIRSLHLNGNYGGALGANALAKGLEGNKS-LRELH 336
           +L+ N ++ +G   L+   LEN    +  L L G      G  ALA  L  N S LR+L 
Sbjct: 772 DLSGNKLNNAGVQILS-GELENPDCNLEILRLTGCNISENGCAALASVLRSNPSYLRDLD 830

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           L  N +   G+R L S L     KL +L +    I+  G   +A  +K+  S L
Sbjct: 831 LSHNDLRSSGVRLLSSALEKPDCKLEILRLEYCKITDDGCAVLASALKSNPSHL 884



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 36/299 (12%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEG 234
           DE L  L   L  ++TA+ + F   G++  G       L+SN + LK L+LSGN +   G
Sbjct: 610 DESLQRLQPVLAASRTAK-LEFC--GVSDKGCDFLASALRSNPSHLKALDLSGNTLNFTG 666

Query: 235 VK-CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           +K  L +    +  ++RL L    L D G  A+A +L+++                    
Sbjct: 667 LKNLLAEFQKPHCKLQRLCLRLCGLTDVGCDALASVLRSDP------------------- 707

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMS 352
                   S +  L+L+GN  G LG   LA GL+  +  L+ L L   SI  EG  AL S
Sbjct: 708 --------SHLTELNLSGNKLGDLGMKLLAGGLQNPHCKLQILRLGDCSITHEGCAALAS 759

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI-NLYMNDIGDEGAEKIADAL 411
            L S    L  LD+  N ++  G   ++  ++N    L I  L   +I + G   +A  L
Sbjct: 760 ALRSNPSHLRELDLSGNKLNNAGVQILSGELENPDCNLEILRLTGCNISENGCAALASVL 819

Query: 412 KQNRT-ITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEVLK 468
           + N + +  +DL  N++ S G   ++  L K +  +  L L Y  I  DG   L+  LK
Sbjct: 820 RSNPSYLRDLDLSHNDLRSSGVRLLSSALEKPDCKLEILRLEYCKITDDGCAVLASALK 878



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 38/276 (13%)

Query: 318 GANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           G + LA  L  N S L+ L L GN++   G++ L++       KL  L +    ++  G 
Sbjct: 637 GCDFLASALRSNPSHLKALDLSGNTLNFTGLKNLLAEFQKPHCKLQRLCLRLCGLTDVGC 696

Query: 377 FHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASA 434
             +A  +++  S L  +NL  N +GD G + +A  L+     +  + LG  +I  +G +A
Sbjct: 697 DALASVLRSDPSHLTELNLSGNKLGDLGMKLLAGGLQNPHCKLQILRLGDCSITHEGCAA 756

Query: 435 IARVLKDN-SVITSLDLAYNPIGADGAKALS-EVLKFHGNINTLKLGWCQIGASGAEFVA 492
           +A  L+ N S +  LDL+ N +   G + LS E+     N+  L+L  C I  +G   +A
Sbjct: 757 LASALRSNPSHLRELDLSGNKLNNAGVQILSGELENPDCNLEILRLTGCNISENGCAALA 816

Query: 493 DMLRYNNT-ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL 551
            +LR N + +  LDL  N LR                                  G + L
Sbjct: 817 SVLRSNPSYLRDLDLSHNDLRS--------------------------------SGVRLL 844

Query: 552 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 587
           + + +  +  L  + L + +I DDG   +A ALK+N
Sbjct: 845 SSALEKPDCKLEILRLEYCKITDDGCAVLASALKSN 880


>gi|449432716|ref|XP_004134145.1| PREDICTED: RAN GTPase-activating protein 2-like [Cucumis sativus]
 gi|449530527|ref|XP_004172246.1| PREDICTED: RAN GTPase-activating protein 2-like [Cucumis sativus]
          Length = 540

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 134/274 (48%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I  E  + + +++     +  L   
Sbjct: 219 LNLSNNALGEKGVRAFGSLLKSQSCLEELYLMNDGISKEAAQAVSELIPSTDKLRILHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  ID  G  +L+ AL     ++ L L  N  
Sbjct: 279 NNMTGDEGAFAIAEVVKRSLLLEDFRCSSTRIDSEGGVALSLALGTCPRLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  AL+K L  +  L+EL+L   ++ DEG  A+ + L      L VL+I  N I+A+
Sbjct: 339 GVEGGVALSKALSHHADLKELYLSYQNLEDEGAIAIANILKDTAPTLEVLEIAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I     L+ +NL  N++ DEG  +I+ A++    +  +D+  N I   G   
Sbjct: 399 AASALAACITQKAHLISLNLGENELKDEGTIQISKAIEGLIKLKKVDMNTNLIRRAGTRV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L ++ K
Sbjct: 459 LAQTVVQKPDFQLLNINGNFISDEGIDELKDIFK 492



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 14/294 (4%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +  LEG+  LR L+L  N++G++G+RA  S L S+   L  L + N+ IS + A  V+E
Sbjct: 207 FSDALEGS-ILRSLNLSNNALGEKGVRAFGSLLKSQSC-LEELYLMNDGISKEAAQAVSE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I +   L  ++ + N  GDEGA  IA+ +K++  +         I S+G  A++  L  
Sbjct: 265 LIPSTDKLRILHFHNNMTGDEGAFAIAEVVKRSLLLEDFRCSSTRIDSEGGVALSLALGT 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
              +  LDL  N  G +G  ALS+ L  H ++  L L +  +   GA  +A++L+    T
Sbjct: 325 CPRLKKLDLRDNMFGVEGGVALSKALSHHADLKELYLSYQNLEDEGAIAIANILKDTAPT 384

Query: 501 ISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNE 560
           + +L++  N +  E        S   + I    H++  +L  N L+    + Q  K +  
Sbjct: 385 LEVLEIAGNDITAEA------ASALAACITQKAHLISLNLGENELKDEGTI-QISKAIEG 437

Query: 561 --ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
              L  +D+  N IR  G   +AQ +    D  +  LN+  NF++  G   L D
Sbjct: 438 LIKLKKVDMNTNLIRRAGTRVLAQTVVQKPDFQL--LNINGNFISDEGIDELKD 489



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 6/266 (2%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ Q ++E          +       GDEG F +AE +  +   E+   ++  I + G 
Sbjct: 256 KEAAQAVSELIPSTDKLRILHFHNNMTGDEGAFAIAEVVKRSLLLEDFRCSSTRIDSEGG 315

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L +   LK L+L  N  G EG   L   L  +A ++ L LS  +L DEGA AIA
Sbjct: 316 VALSLALGTCPRLKKLDLRDNMFGVEGGVALSKALSHHADLKELYLSYQNLEDEGAIAIA 375

Query: 268 ELLKNNS-ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            +LK+ +  L VLE+  N I     ++LA  + + + + SL+L  N     G   ++K +
Sbjct: 376 NILKDTAPTLEVLEIAGNDITAEAASALAACITQKAHLISLNLGENELKDEGTIQISKAI 435

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           EG   L+++ ++ N I   G R L   +  +K    +L+I  N IS +G   + +  K  
Sbjct: 436 EGLIKLKKVDMNTNLIRRAGTRVLAQTV-VQKPDFQLLNINGNFISDEGIDELKDIFKKF 494

Query: 387 KSLLWINLYMNDI-GDEG--AEKIAD 409
             +L   L  ND  G++G   E +AD
Sbjct: 495 PDMLG-PLDENDPEGEDGDDEESVAD 519


>gi|444730726|gb|ELW71100.1| Leucine-rich repeat-containing protein 68 [Tupaia chinensis]
          Length = 646

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 29/335 (8%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  ++ + L E  K L+ F  VD+   N  ++G   L + + Y ++A  ++ + N    
Sbjct: 83  KLDYKTCEALEEVFKRLQ-FKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFN---- 137

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                                    IG  G +    ++   + ++ L   S  L D  A 
Sbjct: 138 -----------------------KHIGTRGWQAAAHMMRKTSCLQYLDARSTPLLDHSAP 174

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA-LA 323
            +A  L+  S L VL L N  +       LA AL  N  +R L+L  N    L  +A L 
Sbjct: 175 FVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMNLRELYLADNKLNGLQDSAQLG 234

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ N SL+ L L  N + D G+  +  GL  ++  LA L + NN ++  G   +   +
Sbjct: 235 NLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQRKGLATLVLWNNQLTHTGMAFLGMTL 294

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            + ++L  +NL  N IG+EG   + + L  NR++  + L    +  +GA A+A  + ++ 
Sbjct: 295 PHTQTLETLNLGHNPIGNEGVRNLKNGLIGNRSVLRLGLASTKLTCEGAVAVAEFIAESP 354

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +  LDL  N I   G  ALS  LK + ++  L L
Sbjct: 355 RLLRLDLRENEIKTGGLMALSLALKVNHSLLRLDL 389



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 4/292 (1%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS-SVDLRDEGAKAIAELLKNNSIL 276
           +  K ++L    + ++G   L D++        L +S +  +   G +A A +++  S L
Sbjct: 99  LQFKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAHMMRKTSCL 158

Query: 277 RVLELNNN-MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+  +  ++D+S    +A AL   S++  LHL            LA  L+ N +LREL
Sbjct: 159 QYLDARSTPLLDHSA-PFVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMNLREL 217

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC-KSLLWINL 394
           +L  N +      A +  L      L +LD+ NN +   G  ++ E +K   K L  + L
Sbjct: 218 YLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQRKGLATLVL 277

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N +   G   +   L   +T+ T++LG N I ++G   +   L  N  +  L LA   
Sbjct: 278 WNNQLTHTGMAFLGMTLPHTQTLETLNLGHNPIGNEGVRNLKNGLIGNRSVLRLGLASTK 337

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +  +GA A++E +     +  L L   +I   G   ++  L+ N+++  LDL
Sbjct: 338 LTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALKVNHSLLRLDL 389



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 1/145 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D+   +  D GL ++ E L   +     +    N +T  G+      L     L+TLNL
Sbjct: 246 LDLRNNHVLDSGLAYICEGLKEQRKGLATLVLWNNQLTHTGMAFLGMTLPHTQTLETLNL 305

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             NPIG+EGV+ L + L+ N  V RL L+S  L  EGA A+AE +  +  L  L+L  N 
Sbjct: 306 GHNPIGNEGVRNLKNGLIGNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENE 365

Query: 286 IDYSGFTSLAEALLENSTIRSLHLN 310
           I   G  +L+ AL  N ++  L L+
Sbjct: 366 IKTGGLMALSLALKVNHSLLRLDLD 390



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 14/317 (4%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L    +DY    +L E + +    + + L        GA+AL   +E  +S   L++ 
Sbjct: 77  LDLKGEKLDYKTCEALEE-VFKRLQFKVVDLEQTNLDEDGASALFDMIEYYESATHLNIS 135

Query: 339 GNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            N  IG  G +A  + +  +   L  LD  +  +    A  VA  ++   SL  ++L   
Sbjct: 136 FNKHIGTRGWQA-AAHMMRKTSCLQYLDARSTPLLDHSAPFVARALRIRSSLAVLHLENA 194

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-IARVLKDNSVITSLDLAYNPIG 456
            +       +A ALK N  +  + L  N ++    SA +  +LK N  +  LDL  N + 
Sbjct: 195 SLSGRPLMLLATALKMNMNLRELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVL 254

Query: 457 ADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
             G   + E LK     + TL L   Q+  +G  F+   L +  T+  L+L  N + +E 
Sbjct: 255 DSGLAYICEGLKEQRKGLATLVLWNNQLTHTGMAFLGMTLPHTQTLETLNLGHNPIGNE- 313

Query: 516 CSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIR 573
                G+    + +   + +L   L    L  +GA  +A+ F   +  L  +DL  NEI+
Sbjct: 314 -----GVRNLKNGLIGNRSVLRLGLASTKLTCEGAVAVAE-FIAESPRLLRLDLRENEIK 367

Query: 574 DDGAFAIAQALKANEDV 590
             G  A++ ALK N  +
Sbjct: 368 TGGLMALSLALKVNHSL 384


>gi|332236198|ref|XP_003267290.1| PREDICTED: LOW QUALITY PROTEIN: NACHT, LRR and PYD
           domains-containing protein 3 [Nomascus leucogenys]
          Length = 1016

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 3/259 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           ++ + +D+S  + GD G+  L E+L +     + +     G++         VL SN  L
Sbjct: 721 QSLTELDLSDNSLGDPGMTVLCETLQHPGCNIQRLWLGRCGLSHECCFDISLVLSSNQKL 780

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+LS N +GD G++ LC  L      +++L L S  L     + + + L  N  L  L
Sbjct: 781 VELDLSDNALGDFGIRLLCVGLKHLFCNLKKLWLVSCCLTSACVRILHQXLSTNHSLTRL 840

Query: 280 ELNNNMIDYSGFTSLAE-ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +  N +  SG   L E A      ++ L L  +   ++  +AL+  L  N++L  L+L 
Sbjct: 841 YMGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLR 900

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN++GD+GI+ L  GL     KL VL++ N ++++   + ++  + + +SL  ++L  ND
Sbjct: 901 GNTLGDKGIKLLCEGLLHPDCKLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNND 960

Query: 399 IGDEGAEKIADALKQNRTI 417
           +GD G     + LKQ   +
Sbjct: 961 LGDLGVMMFCEVLKQQSCL 979



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 8/200 (4%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  ++SL EL L  NS+GD G+  L   L      +  L +G   +S +  F ++  + +
Sbjct: 717 LSTSQSLTELDLSDNSLGDPGMTVLCETLQHPGCNIQRLWLGRCGLSHECCFDISLVLSS 776

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSV 444
            + L+ ++L  N +GD G   +   LK     +  + L    + S     + + L  N  
Sbjct: 777 NQKLVELDLSDNALGDFGIRLLCVGLKHLFCNLKKLWLVSCCLTSACVRILHQXLSTNHS 836

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG--AEFVADMLRYNNTIS 502
           +T L +  N +G  G   L E  K +   N  KLG    G +      ++ +L  N  ++
Sbjct: 837 LTRLYMGENALGDSGVAILCEKAK-NPQCNLQKLGLVNSGLTSVCCSALSSVLSTNQNLT 895

Query: 503 ILDLRANGLRDE----VCSG 518
            L LR N L D+    +C G
Sbjct: 896 HLYLRGNTLGDKGIKLLCEG 915


>gi|399498022|emb|CCG20339.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTKKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I   G   L E+ K
Sbjct: 459 LAQTVLHKEEFKLLNVNGNFISEVGVDELKEIFK 492



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + K L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   E+  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKL--LNVNGNFISEVGVDELKE 489



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS  G   + E  K    +L
Sbjct: 463 V-LHKEEFKLLNVNGNFISEVGVDELKEIFKKSPEML 498



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
           ++YL    +GA  +A S K                               + L  + L  
Sbjct: 361 LSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  +++++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDMSSNALRRAGARVL 459


>gi|397498167|ref|XP_003819863.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Pan paniscus]
          Length = 1040

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +A+ ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNHITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1000 AEALLQALERNDTILEVWLRGN 1021



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 121/243 (49%), Gaps = 10/243 (4%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 831  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A+ L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDE-VCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQ 553
            L  N  +  L L  N L+DE VCS   GL        SLK +   + CI YL GA+ L Q
Sbjct: 951  LAKNVMLEELCLEENHLQDEGVCSLAEGL----KKNSSLKILKLSNNCITYL-GAEALLQ 1005

Query: 554  SFK 556
            + +
Sbjct: 1006 ALE 1008



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNHITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LA+ L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNHITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 997  YLGAEALLQALERNDTILEVWLRGNTF 1023



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LA+ L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 873  FLALRLGNNHITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWL 932

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+DEG  ++AE LK NS L++L+L+N
Sbjct: 933  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSN 992

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL  N TI  + L GN
Sbjct: 993  NCITYLGAEALLQALERNDTILEVWLRGN 1021



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 86/197 (43%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L   L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 1005

Query: 353  GLSSRKGKLAVLDIGNN 369
             L      L V   GN 
Sbjct: 1006 ALERNDTILEVWLRGNT 1022


>gi|119614350|gb|EAW93944.1| caspase recruitment domain family, member 4, isoform CRA_a [Homo
           sapiens]
          Length = 925

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 1/180 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N I D G++ L   L+  K  +  L + NN I+  GA +V + +  CK L  + L
Sbjct: 733 LRLSVNQITDGGVKVLSEELTKYK-IVTYLGLYNNQITDVGARYVTKILDECKGLTHLKL 791

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +++I+ + + GN +  +GA A A  L+++  +T+L LA N 
Sbjct: 792 GKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNG 851

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G K+L+  L+ + ++  L L   ++    AE +A+ML+ N T+  L L  N ++ E
Sbjct: 852 ISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLCLNGNLIKPE 911



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 98/179 (54%), Gaps = 1/179 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N I ++G  ++AR
Sbjct: 803 YLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L    I    A+   D  R
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLCLNGNLIKPEEAKVYEDEKR 921



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV 515
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DEV
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEV 884



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 33/226 (14%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            DE AE +A+ LK N+T+  + L GN I  +     A+V +D   I
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLCLNGNLIKPEE----AKVYEDEKRI 922



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 85/177 (48%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L+GN I  E
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLCLNGNLIKPE 911



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 33/205 (16%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L +N I D G + +++ L + + +T + L  N I   GA  + ++L +   +T L L 
Sbjct: 733 LRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLG 792

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I ++G K L+  +K   +I+ + +   Q+G  GA+  A+ LR + +++ L L +NG+
Sbjct: 793 KNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGI 852

Query: 512 RDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNE 571
             E                                G K LA++ +  N +L  + L  NE
Sbjct: 853 STE--------------------------------GGKSLARALQQ-NTSLEILWLTQNE 879

Query: 572 IRDDGAFAIAQALKANEDVAVTSLN 596
           + D+ A ++A+ LK N+ +    LN
Sbjct: 880 LNDEVAESLAEMLKVNQTLKHLCLN 904



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 69/127 (54%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMI 286
            LN N+I
Sbjct: 902 CLNGNLI 908



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 80/161 (49%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N+ L +L L  N ++     SLAE L  N T++ L LNGN
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLCLNGN 906



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +  + N IT  G+K     L     +  L L  N I D G + +  IL +  G+  L+L 
Sbjct: 733 LRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLG 792

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +  EG K +A  +KN+  +  + +  N +   G  + AEAL  + ++ +L L  N  
Sbjct: 793 KNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGI 852

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
              G  +LA+ L+ N SL  L L  N + DE   +L   L
Sbjct: 853 STEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEML 892


>gi|399497906|emb|CCG20281.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++    ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYPSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +DL  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 138/296 (46%), Gaps = 30/296 (10%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                   ++ E   +         Y+N +
Sbjct: 336 NMFGPEVGLVLCKALSKHE-------------------NLTEIYPS---------YLN-L 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           GA  +++ L+ H ++  + L    +  +GA  +A  + + +   +L++  N + +E
Sbjct: 427 GAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEE 482



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  +   +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYPSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +DL+ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 G-HSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  +  S ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYPSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ L  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEVL 498



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 133/341 (39%), Gaps = 59/341 (17%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHSAIYSLKHMLFYSLC 541
           +G+ G   + + L   + +  LDLR N    EV    C  LS         KH     + 
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------KHENLTEIY 360

Query: 542 INYL----QGAKCLAQSFK----------------------------VVNEALTSIDLAF 569
            +YL    +GA  +A + K                               + L  + L  
Sbjct: 361 PSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE 420

Query: 570 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
           NE++D+GA  IA+AL+ +    +  ++L++N L + G   L
Sbjct: 421 NELKDEGAIQIAKALEGHSH--LIEVDLSSNALRRAGARVL 459


>gi|146105280|ref|XP_001470019.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|134074389|emb|CAM73141.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 1123

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 111/522 (21%), Positives = 197/522 (37%), Gaps = 145/522 (27%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            L ++  + R    +++     G+ G   L ++L  NQ  + +  + N + A  + A   V
Sbjct: 553  LADYLADNRTMLELNLFSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLV 612

Query: 214  LQSNIALKTLNLSGNPIGDE---GVKCLCDILVDNAGVERL--------------QLSSV 256
            L+ N AL+   L    +  E    VK  C +  + A V+R+              +LSS 
Sbjct: 613  LRENTALREFKLERTRVASEFVEQVKMACSLNRECAAVKRIYYRLHDGDASLTKIELSSP 672

Query: 257  D----LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS---------- 302
            D    + D+    I  +L+NN+ + V++L+ N+I  +G ++LA  L E +          
Sbjct: 673  DEERVIDDQTVSTICTVLRNNTSVEVIDLSGNVIGKNGCSALAATLSECTSKVRKIILSK 732

Query: 303  -------------------TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
                               T+R + L       +G  ALAKGLE N S+  + +  +   
Sbjct: 733  NPIDDDAAAELAACFPKIKTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTA 792

Query: 344  DEGIRALMSGLSSRKGKLAV---------------------------------------- 363
            DE +  LM  L+   G  A+                                        
Sbjct: 793  DENVSLLMRNLALNNGPAALKRITLSIDAGVIVDDVDLSRPVDCSMDDSLCKFLCASLVR 852

Query: 364  ------LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
                  L++ +N IS+    ++ E ++ C SL  ++L  N I + GA++I   L++   +
Sbjct: 853  CPTLRSLNLAHNEISSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSNL 912

Query: 418  TTIDLGGN--------------------------------------NIHSKGAS------ 433
             +++  GN                                      +I   G +      
Sbjct: 913  RSVNFAGNLFSAESLERVSQLVALNMGSEVLKKLYLTTTRGDQLPNDIDLNGTTNSYRLT 972

Query: 434  -----AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
                  +A +L+++S + SLDL  N  G +G  A++EVL+F+  I  L L    IG+ G 
Sbjct: 973  DEEVVVLAGLLQNSSTVKSLDLGSNSFGDEGCIAIAEVLRFNHTIEALNLAGNAIGSKGG 1032

Query: 489  EFVADMLRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIY 530
            E +   L+ N  +  LDL    +  +V    + L   +   Y
Sbjct: 1033 EALYFALKINPQLQHLDLEKTAIPRDVLESISSLLHVNQTPY 1074



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 43/343 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL-KTLNL 225
           +++S     D GL  LAE+L  N + + +  A   ITA GI+    VLQ  I L + +N+
Sbjct: 377 LNISNSLIDDAGLELLAEALQKNTSLKVIELANCRITATGIQKLFAVLQKGICLVQEVNI 436

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQ-----------------LSSVDLRDEGAKAIAE 268
           + N + +  V+ +   L  N  ++ L                  L+ V+      +++  
Sbjct: 437 ANNNLDEGSVQYITAALRANPRLKTLNINVNPAISPASMQEIAGLTMVNRAPPQIRSVLP 496

Query: 269 LLKNNSI-LRVLELNNN--MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           L++NNS  + VL+ +     +D      LA+AL  NST+R L+L+ N  G  GA+ LA  
Sbjct: 497 LIENNSKDVVVLDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADY 556

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  N+++ EL+L   +IG+ G + L   L++ +  L  LD+ NN + A     +   ++ 
Sbjct: 557 LADNRTMLELNLFSCTIGNRGAQNLCKALATNQA-LQSLDLSNNMMDADSLSALPLVLRE 615

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNR-----------------TITTIDLGGNN-- 426
             +L    L    +  E  E++  A   NR                 ++T I+L   +  
Sbjct: 616 NTALREFKLERTRVASEFVEQVKMACSLNRECAAVKRIYYRLHDGDASLTKIELSSPDEE 675

Query: 427 --IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             I  +  S I  VL++N+ +  +DL+ N IG +G  AL+  L
Sbjct: 676 RVIDDQTVSTICTVLRNNTSVEVIDLSGNVIGKNGCSALAATL 718



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 155/341 (45%), Gaps = 33/341 (9%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
            +T  EV      IT  G++A    L+ N ++  + ++ +   DE V  L   L  N G  
Sbjct: 751  KTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALNNGPA 810

Query: 250  RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
             L+  ++ + D G      ++ +  + R ++ +   +D S    L  +L+   T+RSL+L
Sbjct: 811  ALKRITLSI-DAGV-----IVDDVDLSRPVDCS---MDDSLCKFLCASLVRCPTLRSLNL 861

Query: 310  NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
              N   +     + + +E   SL  L L GN I + G + +++ L  R   L  ++   N
Sbjct: 862  AHNEISSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLE-RVSNLRSVNFAGN 920

Query: 370  SISAKGAFHVAEYIK-NCKSLLWINLYM---------NDIG-----------DEGAEKIA 408
              SA+    V++ +  N  S +   LY+         NDI            DE    +A
Sbjct: 921  LFSAESLERVSQLVALNMGSEVLKKLYLTTTRGDQLPNDIDLNGTTNSYRLTDEEVVVLA 980

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
              L+ + T+ ++DLG N+   +G  AIA VL+ N  I +L+LA N IG+ G +AL   LK
Sbjct: 981  GLLQNSSTVKSLDLGSNSFGDEGCIAIAEVLRFNHTIEALNLAGNAIGSKGGEALYFALK 1040

Query: 469  FHGNINTLKLGWCQIGASGAEFVADMLRYNNTI--SILDLR 507
             +  +  L L    I     E ++ +L  N T   +++D+R
Sbjct: 1041 INPQLQHLDLEKTAIPRDVLESISSLLHVNQTPYRAVIDMR 1081



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 118/530 (22%), Positives = 209/530 (39%), Gaps = 88/530 (16%)

Query: 167  VDMSGR--NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
            +D SG+     D+ ++ LA++L  N T  +++ + N     G       L  N  +  LN
Sbjct: 508  LDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELN 567

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            L    IG+ G + LC  L  N  ++ L LS+  +  +   A+  +L+ N+ LR  +L   
Sbjct: 568  LFSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKLERT 627

Query: 285  MI--DYSGFTSLAEAL-LENSTIRSLHLNGNYGGA------------------LGANALA 323
             +  ++     +A +L  E + ++ ++   + G A                     + + 
Sbjct: 628  RVASEFVEQVKMACSLNRECAAVKRIYYRLHDGDASLTKIELSSPDEERVIDDQTVSTIC 687

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
              L  N S+  + L GN IG  G  AL + LS    K+  + +  N I    A  +A   
Sbjct: 688  TVLRNNTSVEVIDLSGNVIGKNGCSALAATLSECTSKVRKIILSKNPIDDDAAAELAACF 747

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI-----DLGGNNIH--------SK 430
               K+L  + LY  +I   G E +A  L++N +I  I     D    N+         + 
Sbjct: 748  PKIKTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALNN 807

Query: 431  GASAIARVL---------------------KDNSV-------------ITSLDLAYNPIG 456
            G +A+ R+                       D+S+             + SL+LA+N I 
Sbjct: 808  GPAALKRITLSIDAGVIVDDVDLSRPVDCSMDDSLCKFLCASLVRCPTLRSLNLAHNEIS 867

Query: 457  ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVC 516
            +     + EV++   ++ +L L   QI  SGA+ +   L   + +  ++   N    E  
Sbjct: 868  SAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSNLRSVNFAGNLFSAESL 927

Query: 517  SGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCL---AQSFKVVNEALT---------- 563
               + L   +     LK +   +   + L     L     S+++ +E +           
Sbjct: 928  ERVSQLVALNMGSEVLKKLYLTTTRGDQLPNDIDLNGTTNSYRLTDEEVVVLAGLLQNSS 987

Query: 564  ---SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               S+DL  N   D+G  AIA+ L+ N    + +LNLA N +   G  AL
Sbjct: 988  TVKSLDLGSNSFGDEGCIAIAEVLRFNH--TIEALNLAGNAIGSKGGEAL 1035



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 20/274 (7%)

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L D +  ++ ++ L +S+  + D G + +AE L+ N+ L+V+EL N  I  +G   L   
Sbjct: 364 LVDYIAASSVIQHLNISNSLIDDAGLELLAEALQKNTSLKVIELANCRITATGIQKLFAV 423

Query: 298 LLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI-------------- 342
           L +    ++ +++  N         +   L  N  L+ L+++ N                
Sbjct: 424 LQKGICLVQEVNIANNNLDEGSVQYITAALRANPRLKTLNINVNPAISPASMQEIAGLTM 483

Query: 343 ---GDEGIRALMSGLSSRKGKLAVLDIGNNSISAK--GAFHVAEYIKNCKSLLWINLYMN 397
                  IR+++  + +    + VLD     ++      + +A+ ++   ++  +NL  N
Sbjct: 484 VNRAPPQIRSVLPLIENNSKDVVVLDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHN 543

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
             GD GA  +AD L  NRT+  ++L    I ++GA  + + L  N  + SLDL+ N + A
Sbjct: 544 SFGDTGASYLADYLADNRTMLELNLFSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDA 603

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           D   AL  VL+ +  +   KL   ++ +   E V
Sbjct: 604 DSLSALPLVLRENTALREFKLERTRVASEFVEQV 637



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 92/435 (21%), Positives = 177/435 (40%), Gaps = 80/435 (18%)

Query: 141 GFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGL--------------------- 179
            F G  + E ++ L  F   +    SVD SG + G  G+                     
Sbjct: 191 SFAGMTYGELEKELLRFLLHMEGLQSVDFSGMDLGTAGMITVGTFVRDTQVSALSFCKCS 250

Query: 180 --------FFLAESLGYNQTAEEVSFAAN-GITAAGIK-----AFD-GVLQSNIALKTLN 224
                   FF A  L   +      F++N G++   ++      FD     +N AL   +
Sbjct: 251 LTNDAVLNFFQAADLANQRYPNSFDFSSNIGLSNDLVRKLISTTFDQSHCITNFALTKTS 310

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA-----------------IA 267
           ++  P     V+  C++  +N  ++R   + V LR+  + A                 + 
Sbjct: 311 VT--PTYVRLVQKECELNQENPAIKR---AVVALRNNSSDAQEVNLQWDAPLPMCMNYLV 365

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           + +  +S+++ L ++N++ID +G   LAEAL +N++++ + L      A G   L   L+
Sbjct: 366 DYIAASSVIQHLNISNSLIDDAGLELLAEALQKNTSLKVIELANCRITATGIQKLFAVLQ 425

Query: 328 GNKSL-RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNSISAKGAFHVAEYI-- 383
               L +E+++  N++ +  ++ + + L +   +L  L+I  N +IS      +A     
Sbjct: 426 KGICLVQEVNIANNNLDEGSVQYITAALRANP-RLKTLNINVNPAISPASMQEIAGLTMV 484

Query: 384 ---------------KNCKSLLWINLYMNDI--GDEGAEKIADALKQNRTITTIDLGGNN 426
                           N K ++ ++     +   D+    +A AL+ N T+  ++L  N+
Sbjct: 485 NRAPPQIRSVLPLIENNSKDVVVLDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHNS 544

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
               GAS +A  L DN  +  L+L    IG  GA+ L + L  +  + +L L    + A 
Sbjct: 545 FGDTGASYLADYLADNRTMLELNLFSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDAD 604

Query: 487 GAEFVADMLRYNNTI 501
               +  +LR N  +
Sbjct: 605 SLSALPLVLRENTAL 619



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 22/251 (8%)

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++ +YI     +  +N+  + I D G E +A+AL++N ++  I+L    I + G   +  
Sbjct: 363 YLVDYIAASSVIQHLNISNSLIDDAGLELLAEALQKNTSLKVIELANCRITATGIQKLFA 422

Query: 438 VLKDN-SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADML 495
           VL+    ++  +++A N +     + ++  L+ +  + TL +     I  +  + +A + 
Sbjct: 423 VLQKGICLVQEVNIANNNLDEGSVQYITAALRANPRLKTLNINVNPAISPASMQEIAGLT 482

Query: 496 RYNNTI----SILDLRANGLRDEVC---SGCNGLSFFHSAIYSLKHMLFYSLCINYLQ-- 546
             N       S+L L  N  +D V    SG  G++    +++ L   L  +  +  L   
Sbjct: 483 MVNRAPPQIRSVLPLIENNSKDVVVLDFSG-KGVTLDDDSVWLLAQALRLNSTVRQLNLS 541

Query: 547 -------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 599
                  GA  LA  +   N  +  ++L    I + GA  + +AL  N+  A+ SL+L+N
Sbjct: 542 HNSFGDTGASYLAD-YLADNRTMLELNLFSCTIGNRGAQNLCKALATNQ--ALQSLDLSN 598

Query: 600 NFLTKFGQSAL 610
           N +     SAL
Sbjct: 599 NMMDADSLSAL 609



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K +  +   G  + D  ++ L++ + +      ++D+ NNSI++ G  ++  Y+    S+
Sbjct: 61  KGVAHIKCAGLGLNDHQLQLLITAIENSPSHPEIIDVSNNSITSAGVVYLIRYLTT-ASV 119

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             ++L  N I + GA       ++  ++  +D+ GN   +  AS
Sbjct: 120 EAVDLRNNQIDEHGALTFFPLFEKKTSVKLLDVQGNPCSAATAS 163


>gi|399498080|emb|CCG20368.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSENALGEKGVRAFGKLLQSQNNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +DL  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ +
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFE 492



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSENALGEKGVRAFGKLLQSQNN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +DL+ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ L  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  +    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFEKSPEVL 498



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 49/295 (16%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSENALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQNNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEV-CSGCNGLSFFHS 527
               +   +    ++G+ G   + + L   + +  LDLR N    EV    C  LS    
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---- 351

Query: 528 AIYSLKHMLFYSLCINYL----QGAKCLAQSFK--------------------------- 556
                KH     + ++YL    +GA  +A + K                           
Sbjct: 352 -----KHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASAIASC 406

Query: 557 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 610
               + L  + L  NE++D+GA  IA+AL+ +    +  ++L++N L + G   L
Sbjct: 407 IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH--LIEVDLSSNALRRAGARVL 459


>gi|326434568|gb|EGD80138.1| hypothetical protein PTSG_13103 [Salpingoeca sp. ATCC 50818]
          Length = 1445

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 3/167 (1%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           LN +  G +GA A+AK L+ N  L+ L L  NSIGDEG   L   L      L  L +  
Sbjct: 43  LNNDGLGVIGARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTA-LEQLFLSE 101

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           NSI  +GA  + E +K+  +L W+ L  N +GDEGA  +A  LK N T+  + L  N+I 
Sbjct: 102 NSIGPEGAVALVEMLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEILILDNNSIT 161

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
             G +A+   L +N  ++ LD+  N      A+A    L     +NT
Sbjct: 162 PVGGAALGAALDENRTLSRLDIEENSTAT--ARAFGAALPVDRELNT 206



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 82/157 (52%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           ++  N   + V    +G+   G +A    L+ N  LKTL L  N IGDEG   L ++L  
Sbjct: 31  AIANNTCGDNVGLNNDGLGVIGARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKH 90

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  +E+L LS   +  EGA A+ E+LK+N+ L  L L  N +   G  +LA+ L  N+T+
Sbjct: 91  NTALEQLFLSENSIGPEGAVALVEMLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTL 150

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             L L+ N    +G  AL   L+ N++L  L +  NS
Sbjct: 151 EILILDNNSITPVGGAALGAALDENRTLSRLDIEENS 187



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 77/144 (53%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + N+ +   GA  VA+ +K+   L  + L  N IGDEGA  +A+ LK N  +  + L  N
Sbjct: 43  LNNDGLGVIGARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTALEQLFLSEN 102

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           +I  +GA A+  +LK N+ +T L L  N +G +GA AL++VLK +  +  L L    I  
Sbjct: 103 SIGPEGAVALVEMLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEILILDNNSITP 162

Query: 486 SGAEFVADMLRYNNTISILDLRAN 509
            G   +   L  N T+S LD+  N
Sbjct: 163 VGGAALGAALDENRTLSRLDIEEN 186



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 82/155 (52%), Gaps = 1/155 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           + L+ + +G  G + +   L DN  ++ L L S  + DEGA  +AE+LK+N+ L  L L+
Sbjct: 41  VGLNNDGLGVIGARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTALEQLFLS 100

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G  +L E L  N+T+  L L  N  G  GA ALAK L+ N +L  L L  NSI
Sbjct: 101 ENSIGPEGAVALVEMLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEILILDNNSI 160

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
              G  AL + L   +  L+ LDI  NS +   AF
Sbjct: 161 TPVGGAALGAALDENR-TLSRLDIEENSTATARAF 194



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 1/116 (0%)

Query: 397 ND-IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           ND +G  GA  +A ALK N  + T+ L  N+I  +GA  +A +LK N+ +  L L+ N I
Sbjct: 45  NDGLGVIGARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTALEQLFLSENSI 104

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           G +GA AL E+LK +  +  L L   ++G  GA  +A +L++N T+ IL L  N +
Sbjct: 105 GPEGAVALVEMLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEILILDNNSI 160



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 7/146 (4%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A++L  N   + +   +N I   G      +L+ N AL+ L LS N IG EG   L ++
Sbjct: 56  VAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTALEQLFLSENSIGPEGAVALVEM 115

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  L L    + DEGA A+A++LK+N+ L +L L+NN I   G  +L  AL EN
Sbjct: 116 LKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEILILDNNSITPVGGAALGAALDEN 175

Query: 302 STIRSLHLNGN-------YGGALGAN 320
            T+  L +  N       +G AL  +
Sbjct: 176 RTLSRLDIEENSTATARAFGAALPVD 201



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 51/84 (60%)

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A+A+ LKDN+ + +L L  N IG +GA  L+E+LK +  +  L L    IG  GA  
Sbjct: 52  GARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTALEQLFLSENSIGPEGAVA 111

Query: 491 VADMLRYNNTISILDLRANGLRDE 514
           + +ML++N T++ L L  N + DE
Sbjct: 112 LVEMLKHNTTLTWLGLERNRVGDE 135



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 35/179 (19%)

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           R + +N+   ++ L  + +G  GA+A+++ LK +  + TL L    IG  GA  +A+ML+
Sbjct: 30  RAIANNTCGDNVGLNNDGLGVIGARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLK 89

Query: 497 YNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFK 556
           +N  +  L L  N +  E                                GA  L +  K
Sbjct: 90  HNTALEQLFLSENSIGPE--------------------------------GAVALVEMLK 117

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 615
             N  LT + L  N + D+GA A+A+ LK N  + +  L L NN +T  G +AL  A D
Sbjct: 118 -HNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEI--LILDNNSITPVGGAALGAALD 173


>gi|66821673|ref|XP_644281.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|60472031|gb|EAL69984.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 880

 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 163/375 (43%), Gaps = 33/375 (8%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNI 218
           E     S+D  G   G+     LA+ +  N+T+ + + F  N I   G  A    +++N 
Sbjct: 492 ENTTIESIDFRGNKLGNATAIKLAQLMSTNKTSLKTIDFFYNHIAPEGGIALARAMKTNN 551

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD--------------------- 257
            L+ L L  N I  +    L + L  N+ ++ + L  +D                     
Sbjct: 552 KLERLYLRLNYINGQTAIMLGNSLAHNSTLKSVHLDHIDDQSGAVFFESLGKSTTTVLNE 611

Query: 258 -------LRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
                  L    A  I++ L K  S L  +   +N +  S   S+A AL  NSTI  L+L
Sbjct: 612 LNLSNCQLESASASEISKTLSKKTSTLVDINFKSNKLGVS-LISIARALEVNSTITRLNL 670

Query: 310 NGN-YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           + N      G   LA  L  NK++  L L  NS+G+     +   L+S    L  LDI  
Sbjct: 671 SDNRIFDTSGGWELADALSNNKTITALSLSTNSLGNGFAEGIARALNSSTCSLKSLDISG 730

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA ++AE + N K+L  +N+  N +  +  + IAD+LK NR++  ++L   ++ 
Sbjct: 731 NQIDYAGAKYIAEALSNNKTLKLLNMSQNKLSPQFGQLIADSLKVNRSLIHLELSYTSLG 790

Query: 429 SKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            KG+  IA +L  D + +  L++  N I        +E L  + +I  L L + ++    
Sbjct: 791 DKGSLPIASLLANDGTHLIRLNMNENEINDKVGIIFAESLATNTHIQVLDLSFNKLTYRS 850

Query: 488 AEFVADMLRYNNTIS 502
            E     L+ N +I+
Sbjct: 851 KEVFERSLKTNLSIT 865



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 123/526 (23%), Positives = 220/526 (41%), Gaps = 42/526 (7%)

Query: 86  KQIASFVVPAGVFVSATFVLWKLVEKLLMPK--PSRPSKPTAEGMNWSVGAGTNLLSGFT 143
           K+   + V   +  S+TF  +  V K  MP   P +  K T + +         L + F+
Sbjct: 376 KKFKFYYVAMHIDKSSTFQKFMNVVKHTMPDRVPEKFMKATTKPI---------LSNSFS 426

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
             LF +      E A  +  F       +    E    +  +L  N +   +SF    + 
Sbjct: 427 KNLFTQ----FFEVANSMTYFR---FYQKWISPENFMAIGNALRINTSITHLSFRHGNLD 479

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD-----L 258
              I A    L  N  +++++  GN +G+     L  ++  N    +  L ++D     +
Sbjct: 480 DDSIDAVINALSENTTIESIDFRGNKLGNATAIKLAQLMSTN----KTSLKTIDFFYNHI 535

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGA 316
             EG  A+A  +K N+ L  L L  N I+      L  +L  NST++S+HL+   +  GA
Sbjct: 536 APEGGIALARAMKTNNKLERLYLRLNYINGQTAIMLGNSLAHNSTLKSVHLDHIDDQSGA 595

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           +   +L K       L EL+L    +       +   LS +   L  ++  +N +     
Sbjct: 596 VFFESLGKS--TTTVLNELNLSNCQLESASASEISKTLSKKTSTLVDINFKSNKLGV-SL 652

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGD-EGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
             +A  ++   ++  +NL  N I D  G  ++ADAL  N+TIT + L  N++ +  A  I
Sbjct: 653 ISIARALEVNSTITRLNLSDNRIFDTSGGWELADALSNNKTITALSLSTNSLGNGFAEGI 712

Query: 436 ARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           AR L  ++  + SLD++ N I   GAK ++E L  +  +  L +   ++     + +AD 
Sbjct: 713 ARALNSSTCSLKSLDISGNQIDYAGAKYIAEALSNNKTLKLLNMSQNKLSPQFGQLIADS 772

Query: 495 LRYNNTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAK--CLA 552
           L+ N ++  L+L    L D+       L           H++  ++  N +        A
Sbjct: 773 LKVNRSLIHLELSYTSLGDK-----GSLPIASLLANDGTHLIRLNMNENEINDKVGIIFA 827

Query: 553 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 598
           +S    N  +  +DL+FN++         ++LK N  +   S NL 
Sbjct: 828 ESL-ATNTHIQVLDLSFNKLTYRSKEVFERSLKTNLSITNISFNLV 872



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 33/268 (12%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD-EGVKCLCDILVDNAGVE 249
           T  +++F +N +  + I +    L+ N  +  LNLS N I D  G   L D L +N  + 
Sbjct: 637 TLVDINFKSNKLGVSLI-SIARALEVNSTITRLNLSDNRIFDTSGGWELADALSNNKTIT 695

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            L LS+  L +  A+ IA  L +++  L+ L+++ N IDY+G   +AEAL  N T++ L+
Sbjct: 696 ALSLSTNSLGNGFAEGIARALNSSTCSLKSLDISGNQIDYAGAKYIAEALSNNKTLKLLN 755

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           ++ N         +A  L+ N+SL  L L   S+GD                        
Sbjct: 756 MSQNKLSPQFGQLIADSLKVNRSLIHLELSYTSLGD------------------------ 791

Query: 369 NSISAKGAFHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
                KG+  +A  + N  + L+ +N+  N+I D+     A++L  N  I  +DL  N +
Sbjct: 792 -----KGSLPIASLLANDGTHLIRLNMNENEINDKVGIIFAESLATNTHIQVLDLSFNKL 846

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPI 455
             +      R LK N  IT++     P+
Sbjct: 847 TYRSKEVFERSLKTNLSITNISFNLVPL 874


>gi|168015760|ref|XP_001760418.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688432|gb|EDQ74809.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 550

 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 30/278 (10%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK+LNLS N +G++GV+    +L     +E L   +  +  + A+AI E+L ++  LR L
Sbjct: 224 LKSLNLSDNALGEKGVRAFSALLSSQRSLEALYFMNNGISADAARAIREILPSSKELRTL 283

Query: 280 ELNNNMIDYSGFTSLA-----------------------------EALLENSTIRSLHLN 310
             +NNM    G   LA                             EAL    ++RS+ + 
Sbjct: 284 RFHNNMTGDEGAVELAAGVVGEAPLLEHFQFSSSRVGSEGGIALMEALQGGKSLRSIDIR 343

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  G   LA  L  +  L+E++L    + DEG  A++  L+    ++ +L++G N 
Sbjct: 344 DNMYGPEGGAGLALALRSHTMLKEVYLSDLGLEDEGALAVVKALTEASSQVVILELGGNE 403

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHS 429
           I+ K A  +A  I + + L  +NL  N++ D GA  ++ A+K     +  +DL  N +  
Sbjct: 404 ITEKVAPALATCIVSMRHLTRLNLMENELKDRGAIIVSKAIKGRLDNLRELDLSVNELSR 463

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            GA A A  + +      L+L  N I   G +A+ EVL
Sbjct: 464 TGAVAAAEAIANKKDFKCLNLNGNQISEQGIEAVQEVL 501



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 146/295 (49%), Gaps = 14/295 (4%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  LEG+ +L+ L+L  N++G++G+RA  + LSS++  L  L   NN ISA  A  + E
Sbjct: 215 ISTALEGS-TLKSLNLSDNALGEKGVRAFSALLSSQR-SLEALYFMNNGISADAARAIRE 272

Query: 382 YIKNCKSLLWINLYMNDIGDEGA-EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            + + K L  +  + N  GDEGA E  A  + +   +       + + S+G  A+   L+
Sbjct: 273 ILPSSKELRTLRFHNNMTGDEGAVELAAGVVGEAPLLEHFQFSSSRVGSEGGIALMEALQ 332

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-RYNN 499
               + S+D+  N  G +G   L+  L+ H  +  + L    +   GA  V   L   ++
Sbjct: 333 GGKSLRSIDIRDNMYGPEGGAGLALALRSHTMLKEVYLSDLGLEDEGALAVVKALTEASS 392

Query: 500 TISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQ--GAKCLAQSFKV 557
            + IL+L  N + ++V           + I S++H+   +L  N L+  GA  ++++ K 
Sbjct: 393 QVVILELGGNEITEKVAPA------LATCIVSMRHLTRLNLMENELKDRGAIIVSKAIKG 446

Query: 558 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             + L  +DL+ NE+   GA A A+A+   +D     LNL  N +++ G  A+ +
Sbjct: 447 RLDNLRELDLSVNELSRTGAVAAAEAIANKKDFKC--LNLNGNQISEQGIEAVQE 499



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 2/240 (0%)

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S L+ L L++N +   G  + +  L    ++ +L+   N   A  A A+ + L  +K LR
Sbjct: 222 STLKSLNLSDNALGEKGVRAFSALLSSQRSLEALYFMNNGISADAARAIREILPSSKELR 281

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L  H N  GDEG   L +G+      L      ++ + ++G   + E ++  KSL  I+
Sbjct: 282 TLRFHNNMTGDEGAVELAAGVVGEAPLLEHFQFSSSRVGSEGGIALMEALQGGKSLRSID 341

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDLAY 452
           +  N  G EG   +A AL+ +  +  + L    +  +GA A+ + L + +S +  L+L  
Sbjct: 342 IRDNMYGPEGGAGLALALRSHTMLKEVYLSDLGLEDEGALAVVKALTEASSQVVILELGG 401

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTISILDLRANGL 511
           N I    A AL+  +    ++  L L   ++   GA  V+  ++   + +  LDL  N L
Sbjct: 402 NEITEKVAPALATCIVSMRHLTRLNLMENELKDRGAIIVSKAIKGRLDNLRELDLSVNEL 461



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 31/221 (14%)

Query: 175 GDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           GDEG   LA  + G     E   F+++ + + G  A    LQ   +L+++++  N  G E
Sbjct: 291 GDEGAVELAAGVVGEAPLLEHFQFSSSRVGSEGGIALMEALQGGKSLRSIDIRDNMYGPE 350

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFT 292
           G   L   L  +  ++ + LS + L DEGA A+ + L + +S + +LEL  N I      
Sbjct: 351 GGAGLALALRSHTMLKEVYLSDLGLEDEGALAVVKALTEASSQVVILELGGNEITEKVAP 410

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN-KSLREL---------------- 335
           +LA  ++    +  L+L  N     GA  ++K ++G   +LREL                
Sbjct: 411 ALATCIVSMRHLTRLNLMENELKDRGAIIVSKAIKGRLDNLRELDLSVNELSRTGAVAAA 470

Query: 336 ------------HLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                       +L+GN I ++GI A+   L+     + VL
Sbjct: 471 EAIANKKDFKCLNLNGNQISEQGIEAVQEVLAKGAAGVHVL 511


>gi|405958461|gb|EKC24588.1| hypothetical protein CGI_10024376 [Crassostrea gigas]
          Length = 582

 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 1/238 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G    + +  +L D   +E+L L    +  EG +A+A +L+ N  +  + L +N +   
Sbjct: 182 LGPSAARAIALVLKDTITLEKLDLRGNWIEGEGGEAVARMLEENDYVTDVCLADNRLGLM 241

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  SL   L  N+ +R L ++ N  G + A  +A+ LE NK L+ L+L  N   ++    
Sbjct: 242 GAQSLCRMLNTNAGLRRLDISDNGFGTVEAAVIAQALETNKYLKVLNLSHNRFDEQAGEI 301

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L   + +    L VLD+  N +  KGA  VA+ IK    L   +L  N  G EG   IAD
Sbjct: 302 LGPAIGA-NDILDVLDLSWNCLRQKGAISVAKGIKENVRLKKCSLAWNGFGPEGGAAIAD 360

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           AL  N ++  ID+ GN + +  A  +A+ +  N  I  L +  N +   GA AL++ +
Sbjct: 361 ALMTNNSLQEIDISGNRLSADVAIKVAKAIMSNDNIRILKMGNNLLTTAGAIALAKAI 418



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 1/223 (0%)

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           S   ++A  L +  T+  L L GN+    G  A+A+ LE N  + ++ L  N +G  G +
Sbjct: 185 SAARAIALVLKDTITLEKLDLRGNWIEGEGGEAVARMLEENDYVTDVCLADNRLGLMGAQ 244

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           +L   L++  G L  LDI +N      A  +A+ ++  K L  +NL  N   ++  E + 
Sbjct: 245 SLCRMLNTNAG-LRRLDISDNGFGTVEAAVIAQALETNKYLKVLNLSHNRFDEQAGEILG 303

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            A+  N  +  +DL  N +  KGA ++A+ +K+N  +    LA+N  G +G  A+++ L 
Sbjct: 304 PAIGANDILDVLDLSWNCLRQKGAISVAKGIKENVRLKKCSLAWNGFGPEGGAAIADALM 363

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            + ++  + +   ++ A  A  VA  +  N+ I IL +  N L
Sbjct: 364 TNNSLQEIDISGNRLSADVAIKVAKAIMSNDNIRILKMGNNLL 406



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 1/227 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A+AIA +LK+   L  L+L  N I+  G  ++A  L EN  +  + L  N  G +GA +
Sbjct: 186 AARAIALVLKDTITLEKLDLRGNWIEGEGGEAVARMLEENDYVTDVCLADNRLGLMGAQS 245

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L + L  N  LR L +  N  G      +   L + K  L VL++ +N    +    +  
Sbjct: 246 LCRMLNTNAGLRRLDISDNGFGTVEAAVIAQALETNK-YLKVLNLSHNRFDEQAGEILGP 304

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I     L  ++L  N +  +GA  +A  +K+N  +    L  N    +G +AIA  L  
Sbjct: 305 AIGANDILDVLDLSWNCLRQKGAISVAKGIKENVRLKKCSLAWNGFGPEGGAAIADALMT 364

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
           N+ +  +D++ N + AD A  +++ +  + NI  LK+G   +  +GA
Sbjct: 365 NNSLQEIDISGNRLSADVAIKVAKAIMSNDNIRILKMGNNLLTTAGA 411



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 1/221 (0%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
           T E++    N I   G +A   +L+ N  +  + L+ N +G  G + LC +L  NAG+ R
Sbjct: 199 TLEKLDLRGNWIEGEGGEAVARMLEENDYVTDVCLADNRLGLMGAQSLCRMLNTNAGLRR 258

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L +S        A  IA+ L+ N  L+VL L++N  D      L  A+  N  +  L L+
Sbjct: 259 LDISDNGFGTVEAAVIAQALETNKYLKVLNLSHNRFDEQAGEILGPAIGANDILDVLDLS 318

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N     GA ++AKG++ N  L++  L  N  G EG  A+   L +    L  +DI  N 
Sbjct: 319 WNCLRQKGAISVAKGIKENVRLKKCSLAWNGFGPEGGAAIADALMT-NNSLQEIDISGNR 377

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
           +SA  A  VA+ I +  ++  + +  N +   GA  +A A+
Sbjct: 378 LSADVAIKVAKAIMSNDNIRILKMGNNLLTTAGAIALAKAI 418



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 41/272 (15%)

Query: 380 AEYIKNCKSL--LWINLYMNDIGD------------EGAEKIADALKQNRTITTIDLGGN 425
           + Y K C  L  + IN +M  I D              A  IA  LK   T+  +DL GN
Sbjct: 149 SHYTKICNQLGLVPINYFMRHIQDTELAMRYHGLGPSAARAIALVLKDTITLEKLDLRGN 208

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I  +G  A+AR+L++N  +T + LA N +G  GA++L  +L  +  +  L +     G 
Sbjct: 209 WIEGEGGEAVARMLEENDYVTDVCLADNRLGLMGAQSLCRMLNTNAGLRRLDISDNGFGT 268

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEV----------------------CSGCNGLS 523
             A  +A  L  N  + +L+L  N   ++                       C    G  
Sbjct: 269 VEAAVIAQALETNKYLKVLNLSHNRFDEQAGEILGPAIGANDILDVLDLSWNCLRQKGAI 328

Query: 524 FFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 581
                I     +   SL  N    +G   +A +  + N +L  ID++ N +  D A  +A
Sbjct: 329 SVAKGIKENVRLKKCSLAWNGFGPEGGAAIADAL-MTNNSLQEIDISGNRLSADVAIKVA 387

Query: 582 QALKANEDVAVTSLNLANNFLTKFGQSALTDA 613
           +A+ +N+++ +  L + NN LT  G  AL  A
Sbjct: 388 KAIMSNDNIRI--LKMGNNLLTTAGAIALAKA 417



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 88/191 (46%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + V ++    G  G   L   L  N     +  + NG            L++N  LK LN
Sbjct: 229 TDVCLADNRLGLMGAQSLCRMLNTNAGLRRLDISDNGFGTVEAAVIAQALETNKYLKVLN 288

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N   ++  + L   +  N  ++ L LS   LR +GA ++A+ +K N  L+   L  N
Sbjct: 289 LSHNRFDEQAGEILGPAIGANDILDVLDLSWNCLRQKGAISVAKGIKENVRLKKCSLAWN 348

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
                G  ++A+AL+ N++++ + ++GN   A  A  +AK +  N ++R L +  N +  
Sbjct: 349 GFGPEGGAAIADALMTNNSLQEIDISGNRLSADVAIKVAKAIMSNDNIRILKMGNNLLTT 408

Query: 345 EGIRALMSGLS 355
            G  AL   ++
Sbjct: 409 AGAIALAKAIN 419


>gi|399498092|emb|CCG20374.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 28/277 (10%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+     L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAE-----ALLEN-----------------------STIRSLHLNG 311
             +NNM    G  ++AE      LLE+                       S ++ L L  
Sbjct: 276 HFHNNMTGAEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRD 335

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I
Sbjct: 336 NMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDI 395

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           +A+ A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   G
Sbjct: 396 TAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAG 455

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           A  +A+ +        L++  N I  +G   L E+ K
Sbjct: 456 ARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  G EGA  IA+ +K++  +         + S+G S +    
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGAEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAP 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEVCSGCNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK 556
            ++++L++  N +  E  S           +  L      SL  N L  +GA  +A++ +
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASCIAAKQLLAKL------SLGENELKDEGAIQIAKALE 436

Query: 557 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 612
             +  L  +D++ N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 437 -GHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 30/223 (13%)

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------- 240
           F  N   A G  A   +++ +  L+    S   +G EG   LC+                
Sbjct: 277 FHNNMTGAEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRDN 336

Query: 241 ------------ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMID 287
                        L ++  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I 
Sbjct: 337 MFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDIT 396

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
               +++A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G 
Sbjct: 397 AEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGA 456

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           R L   +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 457 RVLAQTV-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498


>gi|294718615|gb|ADF32020.1| leucine rich repeat containing protein 1 [Azumapecten farreri]
          Length = 588

 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 1/212 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++A  L +N T+  L+LNGN+    G  A+A+ LE N  + E+ L  N +G  G ++L  
Sbjct: 203 AMALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVCLSDNRLGTTGAKSLCR 262

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L    G L  +D+ +N+          E + N K L  +NL  N  G++  E +  A+ 
Sbjct: 263 MLGVNTG-LRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRNRFGEQAGELLGPAIA 321

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N  + ++DL  N++  KGA ++AR LK+N  + +  LA+N  G +G  A+++ L  + +
Sbjct: 322 SNDILDSLDLSWNHLRQKGAVSVARGLKENVRLKNCSLAWNGFGPEGGAAIADALVTNNS 381

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  + +   ++ A  A  +A  +  N+ I +L
Sbjct: 382 LQEIDISGNRLNADVAVKIAKAIAVNDNIRVL 413



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 29/275 (10%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +E+    +G+     KA   VL+ N+ L+ LNL+GN I   G + +  +L +N  +  + 
Sbjct: 187 QELVMRYHGLGPVAAKAMALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVC 246

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LS   L   GAK++  +L  N+ LR ++L++N  +        E L  N  ++SL+L+ N
Sbjct: 247 LSDNRLGTTGAKSLCRMLGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRN 306

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G      L   +  N  L  L L  N +  +G  ++  GL                  
Sbjct: 307 RFGEQAGELLGPAIASNDILDSLDLSWNHLRQKGAVSVARGLKENV-------------- 352

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
                     +KNC SL W     N  G EG   IADAL  N ++  ID+ GN +++  A
Sbjct: 353 ---------RLKNC-SLAW-----NGFGPEGGAAIADALVTNNSLQEIDISGNRLNADVA 397

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             IA+ +  N  I  L +  N +   GA AL+  +
Sbjct: 398 VKIAKAIAVNDNIRVLRMGNNLLTTIGAIALARAI 432



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 31/276 (11%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A  L  N T E+++   N I   G +A   +L+ N  +  + LS N +G  G K LC +
Sbjct: 204 MALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVCLSDNRLGTTGAKSLCRM 263

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N G+ ++ LS     D   +   E+L NN  L+ L L+ N         L  A+  N
Sbjct: 264 LGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRNRFGEQAGELLGPAIASN 323

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             + SL L+ N+    GA ++A+GL+ N  L+   L  N  G EG  A+   L +    L
Sbjct: 324 DILDSLDLSWNHLRQKGAVSVARGLKENVRLKNCSLAWNGFGPEGGAAIADALVT-NNSL 382

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             +DI  N ++A  A                             KIA A+  N  I  + 
Sbjct: 383 QEIDISGNRLNADVAV----------------------------KIAKAIAVNDNIRVLR 414

Query: 422 LGGNNIHSKGASAIARVLK--DNSVITSLDLAYNPI 455
           +G N + + GA A+AR +   ++S +  LDL   P+
Sbjct: 415 MGNNLLTTIGAIALARAINETESSEMEELDLTDVPV 450



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 37/244 (15%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G   A+ +A  LK N T+  ++L GN I   G  A+AR+L++N  I+ + L+ N +G  
Sbjct: 196 LGPVAAKAMALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVCLSDNRLGTT 255

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GAK+L  +L  +  +  + L          EF  +ML  N  +  L+L  N        G
Sbjct: 256 GAKSLCRMLGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRNRF------G 309

Query: 519 CNGLSFFHSAIYSLKHMLFYSLCINYL--QGAKCLAQSFK-------------------- 556
                    AI S   +    L  N+L  +GA  +A+  K                    
Sbjct: 310 EQAGELLGPAIASNDILDSLDLSWNHLRQKGAVSVARGLKENVRLKNCSLAWNGFGPEGG 369

Query: 557 -------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 609
                  V N +L  ID++ N +  D A  IA+A+  N+++ V  L + NN LT  G  A
Sbjct: 370 AAIADALVTNNSLQEIDISGNRLNADVAVKIAKAIAVNDNIRV--LRMGNNLLTTIGAIA 427

Query: 610 LTDA 613
           L  A
Sbjct: 428 LARA 431



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 42/334 (12%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S V +S    G  G   L   LG N    ++  + N      ++ F  +L +N  LK+L
Sbjct: 242 ISEVCLSDNRLGTTGAKSLCRMLGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSL 301

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N  G++  + L   +  N  ++ L LS   LR +GA ++A  LK N  L+   L  
Sbjct: 302 NLSRNRFGEQAGELLGPAIASNDILDSLDLSWNHLRQKGAVSVARGLKENVRLKNCSLAW 361

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  ++A+AL+ N++++ + ++GN   A  A  +AK +  N ++R          
Sbjct: 362 NGFGPEGGAAIADALVTNNSLQEIDISGNRLNADVAVKIAKAIAVNDNIR---------- 411

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
                              VL +GNN ++  GA  +A  I   +S     L + D+  E 
Sbjct: 412 -------------------VLRMGNNLLTTIGAIALARAINETESSEMEELDLTDVPVEF 452

Query: 404 A-EKIADALKQNRTITTIDLG-----GNNIHSKGASAIARVLKDNSVITSLD-LAYNPIG 456
              +I + +K  RT   +  G     GN +   G  AI    + + V+   D +  N + 
Sbjct: 453 EFLRICEDIKMKRTNFKVTHGPILRSGNTMEDLGKPAIDPFKRKDPVMVLQDHIVVNDM- 511

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                 L ++LK H    TL++   Q  A+  E 
Sbjct: 512 -----RLLDILKRHDPDETLQVTPEQFMAALDEL 540



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 29/202 (14%)

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           + Y+ +G   AKA++ VLK +  +  L L    I   G E +A ML  N+ IS + L  N
Sbjct: 191 MRYHGLGPVAAKAMALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVCLSDN 250

Query: 510 GL----RDEVCS--GCN----------------GLSFFHSAIYSLKHMLFYSLCINYL-- 545
            L       +C   G N                 + FF   + + K++   +L  N    
Sbjct: 251 RLGTTGAKSLCRMLGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRNRFGE 310

Query: 546 QGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 605
           Q  + L  +    N+ L S+DL++N +R  GA ++A+ LK N  V + + +LA N     
Sbjct: 311 QAGELLGPAI-ASNDILDSLDLSWNHLRQKGAVSVARGLKEN--VRLKNCSLAWNGFGPE 367

Query: 606 GQSALTDAKDLVYEMSEKEVNI 627
           G +A+ DA  LV   S +E++I
Sbjct: 368 GGAAIADA--LVTNNSLQEIDI 387


>gi|326435524|gb|EGD81094.1| hypothetical protein PTSG_13136 [Salpingoeca sp. ATCC 50818]
          Length = 1190

 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N    + IRA+ +     K       +G++ ++A     +AE +K+   L  ++L+ N I
Sbjct: 28  NDEAKDKIRAIANNTCGDKVSFVRAGLGDSGVTA-----LAEALKDNTCLKELDLWYNRI 82

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEGA  +A+ LK N T+T + L  NNI  +GA A+A  LK N+ +T+L L  N IG +G
Sbjct: 83  SDEGALALAEVLKHNTTMTKLFLEHNNIGPEGAVALADALKHNTTLTALMLRGNRIGPEG 142

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           A AL+E+LK +  + TL L    I   G   + +ML+YN TI  LD
Sbjct: 143 AVALAEMLKHNTTLTTLDLARNSIEDKGILALGEMLKYNTTIEGLD 188



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 5/170 (2%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD G   +A+ALK N  +  +DL  N I  +GA A+A VLK N+ +T L L +N IG +
Sbjct: 54  LGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTMTKLFLEHNNIGPE 113

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEVCSG 518
           GA AL++ LK +  +  L L   +IG  GA  +A+ML++N T++ LDL  N + D+    
Sbjct: 114 GAVALADALKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLDLARNSIEDKGILA 173

Query: 519 CNGLSFFHSAIYSLKHMLFY-----SLCINYLQGAKCLAQSFKVVNEALT 563
              +  +++ I  L + + +     S C+ +    + L  S  + N   T
Sbjct: 174 LGEMLKYNTTIEGLDNQVTFLPANASRCVRFCPLTEILISSNSMHNNGTT 223



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 74/121 (61%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +GD GV  L + L DN  ++ L L    + DEGA A+AE+LK+N+ +  L L +N I   
Sbjct: 54  LGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTMTKLFLEHNNIGPE 113

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  +LA+AL  N+T+ +L L GN  G  GA ALA+ L+ N +L  L L  NSI D+GI A
Sbjct: 114 GAVALADALKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLDLARNSIEDKGILA 173

Query: 350 L 350
           L
Sbjct: 174 L 174



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 12/210 (5%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           + +N   +++      L D G  A+AE LK+N+ L+ L+L  N I   G  +LAE L  N
Sbjct: 38  IANNTCGDKVSFVRAGLGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHN 97

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L L  N  G  GA ALA  L+ N +L  L L GN IG EG  AL   L      L
Sbjct: 98  TTMTKLFLEHNNIGPEGAVALADALKHNTTLTALMLRGNRIGPEGAVALAEML-KHNTTL 156

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR--TITT 419
             LD+  NSI  KG   + E +K        N  +  + ++     A+A +  R   +T 
Sbjct: 157 TTLDLARNSIEDKGILALGEMLK-------YNTTIEGLDNQVTFLPANASRCVRFCPLTE 209

Query: 420 IDLGGNNIHSKGAS--AIARVLKDNSVITS 447
           I +  N++H+ G +  A+  VLK   V+ +
Sbjct: 210 ILISSNSMHNNGTTERAMVNVLKQLQVMDT 239



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 88/197 (44%), Gaps = 34/197 (17%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L    + DE  +KI  A+  N     +      +   G +A+A  LKDN+ +  LDL YN
Sbjct: 22  LAQTKLNDEAKDKIR-AIANNTCGDKVSFVRAGLGDSGVTALAEALKDNTCLKELDLWYN 80

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            I  +GA AL+EVLK +  +  L L    IG  GA  +AD L++N T++ L LR N +  
Sbjct: 81  RISDEGALALAEVLKHNTTMTKLFLEHNNIGPEGAVALADALKHNTTLTALMLRGNRIGP 140

Query: 514 EVCSGCNGLSFFHSAIYSLKHMLFYSLCINYLQGAKCLAQSFKVVNEALTSIDLAFNEIR 573
           E                                GA  LA+  K  N  LT++DLA N I 
Sbjct: 141 E--------------------------------GAVALAEMLKH-NTTLTTLDLARNSIE 167

Query: 574 DDGAFAIAQALKANEDV 590
           D G  A+ + LK N  +
Sbjct: 168 DKGILALGEMLKYNTTI 184



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 68/134 (50%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G+  LAE+L  N   +E+    N I+  G  A   VL+ N  +  L L  N IG E
Sbjct: 54  LGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTMTKLFLEHNNIGPE 113

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   L D L  N  +  L L    +  EGA A+AE+LK+N+ L  L+L  N I+  G  +
Sbjct: 114 GAVALADALKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLDLARNSIEDKGILA 173

Query: 294 LAEALLENSTIRSL 307
           L E L  N+TI  L
Sbjct: 174 LGEMLKYNTTIEGL 187



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 77/147 (52%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N   ++VSF   G+  +G+ A    L+ N  LK L+L  N I DEG   L ++L  N  +
Sbjct: 41  NTCGDKVSFVRAGLGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTM 100

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            +L L   ++  EGA A+A+ LK+N+ L  L L  N I   G  +LAE L  N+T+ +L 
Sbjct: 101 TKLFLEHNNIGPEGAVALADALKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLD 160

Query: 309 LNGNYGGALGANALAKGLEGNKSLREL 335
           L  N     G  AL + L+ N ++  L
Sbjct: 161 LARNSIEDKGILALGEMLKYNTTIEGL 187



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K+      +D+      DEG   LAE L +N T  ++    N I   G  A    
Sbjct: 62  LAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTMTKLFLEHNNIGPEGAVALADA 121

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L  L L GN IG EG   L ++L  N  +  L L+   + D+G  A+ E+LK N
Sbjct: 122 LKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLDLARNSIEDKGILALGEMLKYN 181

Query: 274 SILRVLE-----LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + +  L+     L  N      F  L E L+ ++   S+H NG    A+
Sbjct: 182 TTIEGLDNQVTFLPANASRCVRFCPLTEILISSN---SMHNNGTTERAM 227



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 547 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 606
           G   LA++ K  N  L  +DL +N I D+GA A+A+ LK N    +T L L +N +   G
Sbjct: 58  GVTALAEALKD-NTCLKELDLWYNRISDEGALALAEVLKHN--TTMTKLFLEHNNIGPEG 114

Query: 607 QSALTDA 613
             AL DA
Sbjct: 115 AVALADA 121


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.133    0.379 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,195,038,884
Number of Sequences: 23463169
Number of extensions: 380642277
Number of successful extensions: 1154749
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4396
Number of HSP's successfully gapped in prelim test: 4094
Number of HSP's that attempted gapping in prelim test: 1047407
Number of HSP's gapped (non-prelim): 47090
length of query: 629
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 480
effective length of database: 8,863,183,186
effective search space: 4254327929280
effective search space used: 4254327929280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)