Your job contains 1 sequence.
>006843
MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ
NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR
WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTDIYNCDTFNENTPPTNDTNYISSLGAA
VYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWRT
SSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNPV
VYELMSEMAFRNEKVQVLEWLKTYAHRRYGKAVPEVEATWEILYHTVYNCTDGIADHNTD
FIVKFPDWDPSLLSGSAISKRDQMHALHALPGPRRFLSEENSDMPQAHLWYSNQELIKGL
KLFLNAGNALAGCATYRYDLVDITRQALSKLANQVYMDAVIAFQHKDASAFNIHSQKFLQ
LIKDIDELLASNDNFLLGTWLESAKKLATNPSEMIQYEYNARTQVTMWYDTNITTQSKLH
DYANKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQVDRWRQQWVFISISWQSNWKTGT
KNYPIRAKGDSIAIAKVLYDKYFGQQLIK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006843
(629 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173209 - symbol:CYL1 "AT5G13690" species:3702... 2412 1.9e-250 1
RGD|1564228 - symbol:Naglu "N-acetylglucosaminidase, alph... 1010 2.8e-135 2
UNIPROTKB|F1S1D7 - symbol:NAGLU "Uncharacterized protein"... 988 5.2e-134 2
UNIPROTKB|P54802 - symbol:NAGLU "Alpha-N-acetylglucosamin... 996 4.8e-131 2
UNIPROTKB|H9L296 - symbol:H9L296 "Uncharacterized protein... 911 8.5e-119 2
UNIPROTKB|A6QM01 - symbol:NAGLU "NAGLU protein" species:9... 980 1.3e-115 3
DICTYBASE|DDB_G0291998 - symbol:naglu "alpha-N-acetylgluc... 862 5.8e-105 2
FB|FBgn0014417 - symbol:CG13397 species:7227 "Drosophila ... 740 1.2e-100 2
>TAIR|locus:2173209 [details] [associations]
symbol:CYL1 "AT5G13690" species:3702 "Arabidopsis
thaliana" [GO:0004561 "alpha-N-acetylglucosaminidase activity"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0005773
"vacuole" evidence=IDA] Pfam:PF05089 EMBL:CP002688 GO:GO:0005773
EMBL:AB006704 CAZy:GH89 HOGENOM:HOG000214539 KO:K01205 OMA:LFPNSTM
InterPro:IPR007781 InterPro:IPR024732 InterPro:IPR024240
InterPro:IPR024733 PANTHER:PTHR12872 Pfam:PF12972 Pfam:PF12971
UniGene:At.49017 UniGene:At.6477 EMBL:AY080811 EMBL:AY117179
IPI:IPI00516873 RefSeq:NP_196873.1 ProteinModelPortal:Q9FNA3
STRING:Q9FNA3 PRIDE:Q9FNA3 ProMEX:Q9FNA3 EnsemblPlants:AT5G13690.1
GeneID:831214 KEGG:ath:AT5G13690 TAIR:At5g13690 InParanoid:Q9FNA3
PhylomeDB:Q9FNA3 ProtClustDB:CLSN2687036 ArrayExpress:Q9FNA3
Genevestigator:Q9FNA3 Uniprot:Q9FNA3
Length = 806
Score = 2412 (854.1 bits), Expect = 1.9e-250, P = 1.9e-250
Identities = 442/625 (70%), Positives = 525/625 (84%)
Query: 1 MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
MALQGINLPLAF GQEAIWQKVF FN++ EDL+D+F GPAFLAWARMGNLH WGGPL++
Sbjct: 184 MALQGINLPLAFTGQEAIWQKVFKRFNISKEDLDDYFGGPAFLAWARMGNLHAWGGPLSK 243
Query: 61 NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
NWL+ QL+LQK+I+SRML+ GMTPVLPSF+GNVP+AL+KI+P ANITRL +WNTVD + R
Sbjct: 244 NWLDDQLLLQKQILSRMLKFGMTPVLPSFSGNVPSALRKIYPEANITRLDNWNTVDGDSR 303
Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTDIYNCDTFNENTPPTNDTNYISSLGAA 180
WCCTYLL+P+DPLF+EIGEAFIKQQ EYG++T+IYNCDTFNENTPPT++ YISSLGAA
Sbjct: 304 WCCTYLLNPSDPLFIEIGEAFIKQQTEEYGEITNIYNCDTFNENTPPTSEPEYISSLGAA 363
Query: 181 VYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWRT 240
VYKAMS+G+K+AVWLMQGWLF SDS FWKPPQ+KALLHSVP GKMIVLDL+AEVKPIW
Sbjct: 364 VYKAMSKGNKNAVWLMQGWLFSSDSKFWKPPQLKALLHSVPFGKMIVLDLYAEVKPIWNK 423
Query: 241 SSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNPV 300
S+QFYG PY+WCMLHNFGGNIE+YG LDSI+SGPVDARVS+NSTMVGVGMCMEGIEQNPV
Sbjct: 424 SAQFYGTPYIWCMLHNFGGNIEMYGALDSISSGPVDARVSKNSTMVGVGMCMEGIEQNPV 483
Query: 301 VYELMSEMAFRNEKVQVLEWLKTYAHRRYGKAVPEVEATWEILYHTVYNCTDGIADHNTD 360
VYEL SEMAFR+EKV V +WLK+YA RRY K ++EA WEILYHTVYNCTDGIADHNTD
Sbjct: 484 VYELTSEMAFRDEKVDVQKWLKSYARRRYMKENHQIEAAWEILYHTVYNCTDGIADHNTD 543
Query: 361 FIVKFPDWDPSLLSGSAISKRDQ-MHALHALPGPRRFL-SEENSDMPQAHLWYSNQELIK 418
FIVK PDWDPS + ++D M + RR L ++ +D+P+AHLWYS +E+I+
Sbjct: 544 FIVKLPDWDPSSSVQDDLKQKDSYMISTGPYETKRRVLFQDKTADLPKAHLWYSTKEVIQ 603
Query: 419 GLKLFLNAGNALAGCATYRYDLVDITRQALSKLANQVYMDAVIAFQHKDASAFNIHSQKF 478
LKLFL AG+ L+ TYRYD+VD+TRQ LSKLANQVY +AV AF KD + S+KF
Sbjct: 604 ALKLFLEAGDDLSRSLTYRYDMVDLTRQVLSKLANQVYTEAVTAFVKKDIGSLGQLSEKF 663
Query: 479 LQLIKDIDELLASNDNFLLGTWLESAKKLATNPSEMIQYEYNARTQVTMWYDTNITTQSK 538
L+LIKD+D LLAS+DN LLGTWLESAKKLA N E QYE+NARTQVTMWYD+N QSK
Sbjct: 664 LELIKDMDVLLASDDNCLLGTWLESAKKLAKNGDERKQYEWNARTQVTMWYDSNDVNQSK 723
Query: 539 LHDYANKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQVDRWRQQWVFISISWQSNWKT 598
LHDYANKFWSGLL DYYLPRA YF+ M KSLR+K F+V++WR++W+ +S WQ ++
Sbjct: 724 LHDYANKFWSGLLEDYYLPRARLYFNEMLKSLRDKKIFKVEKWRREWIMMSHKWQ---QS 780
Query: 599 GTKNYPIRAKGDSIAIAKVLYDKYF 623
++ YP++AKGD++AI++ L KYF
Sbjct: 781 SSEVYPVKAKGDALAISRHLLSKYF 805
>RGD|1564228 [details] [associations]
symbol:Naglu "N-acetylglucosaminidase, alpha" species:10116
"Rattus norvegicus" [GO:0007040 "lysosome organization"
evidence=ISO] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=ISO] [GO:0042474 "middle ear morphogenesis"
evidence=ISO] [GO:0045475 "locomotor rhythm" evidence=ISO]
[GO:0046548 "retinal rod cell development" evidence=ISO]
[GO:0060119 "inner ear receptor cell development" evidence=ISO]
REFSEQ:XM_001081442 Ncbi:XP_001081442
Length = 739
Score = 1010 (360.6 bits), Expect = 2.8e-135, Sum P(2) = 2.8e-135
Identities = 184/369 (49%), Positives = 259/369 (70%)
Query: 1 MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
MAL GINL LA+NGQEAIWQ+V++ +T +++++F+GPAFLAW RMGNLH W GPL +
Sbjct: 155 MALNGINLALAWNGQEAIWQRVYLALGLTQSEIDNYFTGPAFLAWGRMGNLHTWDGPLPR 214
Query: 61 NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
+W +QL LQ +I+ RM GMTPVLP+FAG+VP A+ ++FP N+ +LG+W N
Sbjct: 215 SWHLKQLYLQHRILDRMRSFGMTPVLPAFAGHVPKAITRVFPQVNVIQLGNWGHF--NCS 272
Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTD-IYNCDTFNENTPPTNDTNYISSLGA 179
+ C++LL P DPLF IG F+++ E+G TD IY DTFNE PP +D +Y+++ A
Sbjct: 273 YSCSFLLAPGDPLFPLIGTLFLRELTKEFG--TDHIYGADTFNEMQPPFSDPSYLAAATA 330
Query: 180 AVYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWR 239
AVY+AM D DAVWL+QGWLF FW P Q+KA+L +VP G+++VLDLFAE +P++
Sbjct: 331 AVYEAMVTVDPDAVWLLQGWLFQHQPQFWGPSQIKAVLEAVPRGRLLVLDLFAETQPVYS 390
Query: 240 TSSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNP 299
++ F+G P++WCMLHNFGGN ++G L+ + GP AR+ NSTMVG G+ EGI QN
Sbjct: 391 RTASFHGQPFIWCMLHNFGGNHGLFGALEDVNQGPQAARLFPNSTMVGTGIAPEGIGQNE 450
Query: 300 VVYELMSEMAFRNEKV-QVLEWLKTYAHRRYGKAVPEVEATWEILYHTVYNCT-DGIADH 357
VVY LM+E+ +R + V ++ W+ ++A RRYG + P+ A W +L +VYNC+ + + H
Sbjct: 451 VVYALMAELGWRKDPVPDLVAWVSSFASRRYGVSQPDAVAAWRLLLRSVYNCSGEACSGH 510
Query: 358 NTDFIVKFP 366
N +VK P
Sbjct: 511 NRSPLVKRP 519
Score = 336 (123.3 bits), Expect = 2.8e-135, Sum P(2) = 2.8e-135
Identities = 75/219 (34%), Positives = 125/219 (57%)
Query: 409 LWYSNQELIKGLKLFLNAGNALAGCATYRYDLVDITRQALSKLANQVYMDAVIAFQHKDA 468
+WY+ ++ + +L L A L +RYDL+D+TRQA+ +L + Y +A AF ++D
Sbjct: 527 VWYNRSDVFEAWRLLLRAAPNLTASPAFRYDLLDVTRQAVQELVSSCYEEARTAFLNQDL 586
Query: 469 SAFNIHSQKFL--QLIKDIDELLASNDNFLLGTWLESAKKLATNPSEMIQYEYNARTQVT 526
+ + L +L+ +DELLASN +FLLGTWL+ A+++A + SE YE N+R Q+T
Sbjct: 587 DLL-LRAGGLLTYKLLPSLDELLASNSHFLLGTWLDQAREVAVSESEAQFYEQNSRYQIT 645
Query: 527 MWYDTNITTQSKLHDYANKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQVDRWRQQWV 586
+W + + DYANK +GL+ DYY PR + ++ SL FQ ++ + V
Sbjct: 646 LW-----GPEGNILDYANKQLAGLVADYYQPRWCLFLGTLAHSLARGIPFQQHQFEKS-V 699
Query: 587 FISISWQSNWKTGTKNYPIRAKGDSIAIAKVLYDKYFGQ 625
F + + K YPI+ +GD++ ++K ++ K+ Q
Sbjct: 700 F---PLEQAFINNKKRYPIQPQGDTVDLSKKIFLKFHPQ 735
>UNIPROTKB|F1S1D7 [details] [associations]
symbol:NAGLU "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0046548 "retinal rod cell development"
evidence=IEA] [GO:0045475 "locomotor rhythm" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0021680
"cerebellar Purkinje cell layer development" evidence=IEA]
[GO:0007040 "lysosome organization" evidence=IEA] Pfam:PF05089
CTD:4669 KO:K01205 OMA:LFPNSTM InterPro:IPR007781
InterPro:IPR024732 InterPro:IPR024240 InterPro:IPR024733
PANTHER:PTHR12872 Pfam:PF12972 Pfam:PF12971
GeneTree:ENSGT00390000005900 EMBL:FP016109 RefSeq:XP_003131436.1
UniGene:Ssc.44812 Ensembl:ENSSSCT00000018940 GeneID:100519685
KEGG:ssc:100519685 Uniprot:F1S1D7
Length = 744
Score = 988 (352.9 bits), Expect = 5.2e-134, Sum P(2) = 5.2e-134
Identities = 182/369 (49%), Positives = 256/369 (69%)
Query: 1 MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
MAL GINL LA++GQEAIWQ+V++ +T ++++FF+GPAFLAW RMGNLH W GPL +
Sbjct: 158 MALNGINLALAWSGQEAIWQRVYLALGLTQTEIDEFFTGPAFLAWGRMGNLHTWSGPLPR 217
Query: 61 NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
+W +QL LQ +I+ RM GM PVLP+FAG+VP AL ++FP ++T++G W N
Sbjct: 218 SWHLKQLYLQHRILDRMRSFGMIPVLPAFAGHVPKALTRVFPQISVTQMGSWGHF--NCS 275
Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTD-IYNCDTFNENTPPTNDTNYISSLGA 179
+ C++LL P DPLF +G F+++ E+G TD IY DTFNE PP+++ +Y+++ A
Sbjct: 276 YSCSFLLAPEDPLFPIVGSLFLRELTKEFG--TDHIYGADTFNEMQPPSSEPSYLAAATA 333
Query: 180 AVYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWR 239
AVY+AM D DAVWL+QGWLF FW P Q+ A+L +VP G+++VLDLFAE +P++
Sbjct: 334 AVYQAMITVDPDAVWLLQGWLFQHQPQFWGPAQVGAVLGAVPRGRLLVLDLFAESQPVYV 393
Query: 240 TSSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNP 299
++ F G P++WCMLHNFGGN ++G L+S+ GP AR+ NSTM G GM EGI QN
Sbjct: 394 RTASFLGQPFIWCMLHNFGGNHGLFGALESVNQGPAAARLFPNSTMAGTGMAPEGIGQNE 453
Query: 300 VVYELMSEMAFRNEKVQVL-EWLKTYAHRRYGKAVPEVEATWEILYHTVYNCT-DGIADH 357
VVY LM+E+ +R + V L W+ ++A RRYG + + EA W +L +VYNC+ +G H
Sbjct: 454 VVYALMAELGWRKDPVADLGTWVTSFAARRYGVSQGDAEAAWRLLLRSVYNCSGEGCTGH 513
Query: 358 NTDFIVKFP 366
N +V+ P
Sbjct: 514 NRSPLVRRP 522
Score = 346 (126.9 bits), Expect = 5.2e-134, Sum P(2) = 5.2e-134
Identities = 76/216 (35%), Positives = 127/216 (58%)
Query: 409 LWYSNQELIKGLKLFLNAGNALAGCATYRYDLVDITRQALSKLANQVYMDAVIAFQHKD- 467
+WY+ ++ + +L L A LA +RYDLVDITRQA+ +L + Y +A A+ +K+
Sbjct: 530 VWYNQSDVFEAWRLLLKATPTLASSPAFRYDLVDITRQAVQELVSLYYEEARTAYLNKEL 589
Query: 468 ASAFNIHSQKFLQLIKDIDELLASNDNFLLGTWLESAKKLATNPSEMIQYEYNARTQVTM 527
S +L+ +D++LAS+ +FLLG+WLE A+ +A + +E + YE N+R Q+T+
Sbjct: 590 VSLMRAGGILAYELLPALDKVLASDSHFLLGSWLEQARGVAVSEAEALFYEQNSRYQLTL 649
Query: 528 WYDTNITTQSKLHDYANKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQVDRWRQQWVF 587
W + + DYANK +GL+ DYY PR + + + +SL + FQ ++ Q VF
Sbjct: 650 W-----GPEGNILDYANKQLAGLVADYYTPRWRLFMEMLVESLVQGIPFQQHQFDQN-VF 703
Query: 588 ISISWQSNWKTGTKNYPIRAKGDSIAIAKVLYDKYF 623
+ + GT+ YP + +GD++ +AK L+ KY+
Sbjct: 704 ---QLEQTFVLGTRRYPSQPQGDTVDLAKKLFLKYY 736
>UNIPROTKB|P54802 [details] [associations]
symbol:NAGLU "Alpha-N-acetylglucosaminidase" species:9606
"Homo sapiens" [GO:0004561 "alpha-N-acetylglucosaminidase activity"
evidence=IEA] [GO:0007040 "lysosome organization" evidence=IEA]
[GO:0021680 "cerebellar Purkinje cell layer development"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045475 "locomotor rhythm" evidence=IEA] [GO:0046548 "retinal
rod cell development" evidence=IEA] [GO:0060119 "inner ear receptor
cell development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0005764 "lysosome" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
Pfam:PF05089 Reactome:REACT_116125 GO:GO:0007399 GO:GO:0044281
GO:GO:0005975 GO:GO:0043202 GO:GO:0006027 EMBL:U43572 EMBL:U43573
EMBL:U40846 EMBL:L78464 EMBL:AC067852 EMBL:BC053991 IPI:IPI00008787
PIR:G02270 RefSeq:NP_000254.2 UniGene:Hs.50727
ProteinModelPortal:P54802 SMR:P54802 STRING:P54802 CAZy:GH89
PhosphoSite:P54802 DMDM:1703303 PaxDb:P54802 PRIDE:P54802
Ensembl:ENST00000225927 GeneID:4669 KEGG:hsa:4669 UCSC:uc002hzv.3
CTD:4669 GeneCards:GC17P040687 H-InvDB:HIX0202517 HGNC:HGNC:7632
HPA:HPA038815 MIM:252920 MIM:609701 neXtProt:NX_P54802
Orphanet:79270 PharmGKB:PA31437 eggNOG:NOG86381
HOGENOM:HOG000214539 HOVERGEN:HBG004225 InParanoid:P54802 KO:K01205
OMA:LFPNSTM OrthoDB:EOG4Q84X0 PhylomeDB:P54802 ChiTaRS:NAGLU
DrugBank:DB00141 GenomeRNAi:4669 NextBio:17990 Bgee:P54802
CleanEx:HS_NAGLU Genevestigator:P54802 GermOnline:ENSG00000108784
GO:GO:0004561 InterPro:IPR007781 InterPro:IPR024732
InterPro:IPR024240 InterPro:IPR024733 PANTHER:PTHR12872
Pfam:PF12972 Pfam:PF12971 Uniprot:P54802
Length = 743
Score = 996 (355.7 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 180/369 (48%), Positives = 258/369 (69%)
Query: 1 MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
MAL GINL LA++GQEAIWQ+V++ +T ++N+FF+GPAFLAW RMGNLH W GPL
Sbjct: 157 MALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGRMGNLHTWDGPLPP 216
Query: 61 NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
+W +QL LQ +++ +M GMTPVLP+FAG+VP A+ ++FP N+T++G W N
Sbjct: 217 SWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVTKMGSWGHF--NCS 274
Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTD-IYNCDTFNENTPPTNDTNYISSLGA 179
+ C++LL P DP+F IG F+++ I E+G TD IY DTFNE PP+++ +Y+++
Sbjct: 275 YSCSFLLAPEDPIFPIIGSLFLRELIKEFG--TDHIYGADTFNEMQPPSSEPSYLAAATT 332
Query: 180 AVYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWR 239
AVY+AM+ D +AVWL+QGWLF FW P Q++A+L +VP G+++VLDLFAE +P++
Sbjct: 333 AVYEAMTAVDTEAVWLLQGWLFQHQPQFWGPAQIRAVLGAVPRGRLLVLDLFAESQPVYT 392
Query: 240 TSSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNP 299
++ F G P++WCMLHNFGGN ++G L+++ GP AR+ NSTMVG GM EGI QN
Sbjct: 393 RTASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGMAPEGISQNE 452
Query: 300 VVYELMSEMAFRNEKVQVLE-WLKTYAHRRYGKAVPEVEATWEILYHTVYNCT-DGIADH 357
VVY LM+E+ +R + V L W+ ++A RRYG + P+ A W +L +VYNC+ + H
Sbjct: 453 VVYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYNCSGEACRGH 512
Query: 358 NTDFIVKFP 366
N +V+ P
Sbjct: 513 NRSPLVRRP 521
Score = 310 (114.2 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 69/216 (31%), Positives = 122/216 (56%)
Query: 409 LWYSNQELIKGLKLFLNAGNALAGCATYRYDLVDITRQALSKLANQVYMDAVIAFQHKD- 467
+WY+ ++ + +L L + +LA +RYDL+D+TRQA+ +L + Y +A A+ K+
Sbjct: 529 IWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDLTRQAVQELVSLYYEEARSAYLSKEL 588
Query: 468 ASAFNIHSQKFLQLIKDIDELLASNDNFLLGTWLESAKKLATNPSEMIQYEYNARTQVTM 527
AS +L+ +DE+LAS+ FLLG+WLE A+ A + +E YE N+R Q+T+
Sbjct: 589 ASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTL 648
Query: 528 WYDTNITTQSKLHDYANKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQVDRWRQQWVF 587
W + + DYANK +GL+ +YY PR + + + S+ + FQ ++ + VF
Sbjct: 649 W-----GPEGNILDYANKQLAGLVANYYTPRWRLFLEALVDSVAQGIPFQQHQFDKN-VF 702
Query: 588 ISISWQSNWKTGTKNYPIRAKGDSIAIAKVLYDKYF 623
+ + + YP + +GD++ +AK ++ KY+
Sbjct: 703 ---QLEQAFVLSKQRYPSQPRGDTVDLAKKIFLKYY 735
>UNIPROTKB|H9L296 [details] [associations]
symbol:H9L296 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007040 "lysosome organization" evidence=IEA]
[GO:0021680 "cerebellar Purkinje cell layer development"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045475 "locomotor rhythm" evidence=IEA] [GO:0046548 "retinal
rod cell development" evidence=IEA] [GO:0060119 "inner ear receptor
cell development" evidence=IEA] Pfam:PF05089 OMA:LFPNSTM
InterPro:IPR007781 InterPro:IPR024732 InterPro:IPR024733
PANTHER:PTHR12872 Pfam:PF12972 GeneTree:ENSGT00390000005900
EMBL:AADN02054251 EMBL:AADN02054252 Ensembl:ENSGALT00000035813
Uniprot:H9L296
Length = 601
Score = 911 (325.7 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 177/367 (48%), Positives = 236/367 (64%)
Query: 1 MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
MAL GIN AF GQEA+WQ+V+ + +++ F+GPAFLAW RMGNLH W GPL +
Sbjct: 40 MALSGINAAPAFAGQEALWQRVYRALGLNQTEIDAHFTGPAFLAWNRMGNLHSWAGPLPR 99
Query: 61 NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
W QQL LQ +IV RM LGM VLP+FAG+VP + ++FP N TRLG+W+ D
Sbjct: 100 AWHLQQLYLQYRIVERMRSLGMITVLPAFAGHVPPGVLRVFPRINATRLGNWSHFDCT-- 157
Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTD-IYNCDTFNENTPPTNDTNYISSLGA 179
C YLL P +P+F IG F+K+ I E+G TD IY+ DT P + SL +
Sbjct: 158 LSCAYLLSPEEPMFQVIGTLFLKELIKEFG--TDRIYSADTHPHPRPAVGPW-LLCSLCS 214
Query: 180 AVYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWR 239
+ D +A WLMQGWLF FW+PPQ++A+L +VPLG+MIVLDLFAE KP++
Sbjct: 215 -----LPAADPEAQWLMQGWLFQHQPDFWQPPQVQAVLRAVPLGRMIVLDLFAESKPVYE 269
Query: 240 TSSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNP 299
+ FYG P++WCMLHNFGGN ++G +++I GP AR NSTMVG G+ EGIEQN
Sbjct: 270 WTESFYGQPFIWCMLHNFGGNHGLFGAVEAINRGPFVARRFPNSTMVGTGLVPEGIEQND 329
Query: 300 VVYELMSEMAFRNEKVQVLEWLKTYAHRRYGKAVPEVEATWEILYHTVYNCTDGIADHNT 359
+VYELM+E+ +R+E + + W+ YA RRYG A W++L +VYNC+ +HN
Sbjct: 330 MVYELMNELGWRHEPLDLPVWVSRYAQRRYGAPDAAAGAAWQLLLRSVYNCSGACVNHNR 389
Query: 360 DFIVKFP 366
+V+ P
Sbjct: 390 SPLVRRP 396
Score = 279 (103.3 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 73/207 (35%), Positives = 106/207 (51%)
Query: 409 LWYSNQELIKGLKLFLNAGNALAGCATYRYDLVDITRQALSKLANQVYMDAVIAFQHKDA 468
LWY+ ++ + +L L+AG AL +RYDL D+TRQA+ +L Y +FQ +
Sbjct: 404 LWYNASDVYEAWRLLLSAGAALGSSPAFRYDLADVTRQAVQQLVADYYQRIRDSFQRRAL 463
Query: 469 SAFNIHSQKFL-QLIKDIDELLASNDNFLLGTWLESAKKLATNPSEMIQYEYNARTQVTM 527
L L+ ++D LL S FLLG L+SA AT+ E QYE NAR QVT+
Sbjct: 464 PELLAAGGVLLYDLLPELDALLGSQRLFLLGRLLQSAHAAATSEREAEQYERNARNQVTL 523
Query: 528 WYDTNITTQSKLHDYANKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQVDRWRQQWVF 587
W + + DYANK +GL++DYY R S + + +SL S F +++ Q VF
Sbjct: 524 WGPSG-----NILDYANKQLAGLVLDYYGVRWSLFVSLLVESLNTGSPFPQEQFNQA-VF 577
Query: 588 ISISWQSNWKTGTKNYPIRAKGDSIAI 614
+ + K YP GD++ I
Sbjct: 578 ---QVERGFVYNEKRYPATPVGDTLEI 601
>UNIPROTKB|A6QM01 [details] [associations]
symbol:NAGLU "NAGLU protein" species:9913 "Bos taurus"
[GO:0060119 "inner ear receptor cell development" evidence=IEA]
[GO:0046548 "retinal rod cell development" evidence=IEA]
[GO:0045475 "locomotor rhythm" evidence=IEA] [GO:0042474 "middle
ear morphogenesis" evidence=IEA] [GO:0021680 "cerebellar Purkinje
cell layer development" evidence=IEA] [GO:0007040 "lysosome
organization" evidence=IEA] Pfam:PF05089 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH89 CTD:4669 eggNOG:NOG86381
HOGENOM:HOG000214539 HOVERGEN:HBG004225 KO:K01205 OMA:LFPNSTM
OrthoDB:EOG4Q84X0 InterPro:IPR007781 InterPro:IPR024732
InterPro:IPR024240 InterPro:IPR024733 PANTHER:PTHR12872
Pfam:PF12972 Pfam:PF12971 GeneTree:ENSGT00390000005900
EMBL:DAAA02049190 EMBL:BC148147 IPI:IPI00717554
RefSeq:NP_001095696.1 UniGene:Bt.4204 Ensembl:ENSBTAT00000063695
GeneID:789125 KEGG:bta:789125 InParanoid:A6QM01 NextBio:20929511
Uniprot:A6QM01
Length = 667
Score = 980 (350.0 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 181/369 (49%), Positives = 256/369 (69%)
Query: 1 MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
MAL GINL LA++GQEAIWQ+V++ +T +++++F+GPAFLAW RMGNLH W GPL
Sbjct: 157 MALNGINLALAWSGQEAIWQRVYLALGLTQAEIDEYFTGPAFLAWGRMGNLHTWSGPLPP 216
Query: 61 NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
+W +QL LQ +I+ RM GM PVLP+FAG+VP AL ++FP N+T++G+W N
Sbjct: 217 SWHLKQLYLQHRILDRMRSFGMIPVLPAFAGHVPKALTRVFPQVNVTQMGNWGHF--NCS 274
Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTD-IYNCDTFNENTPPTNDTNYISSLGA 179
+ C++LL P DPLF +G F+++ E+G TD IY DTFNE PP+++ +Y+++ A
Sbjct: 275 YSCSFLLAPEDPLFPLVGSLFLRELTKEFG--TDHIYGADTFNEMQPPSSEPSYLAAATA 332
Query: 180 AVYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWR 239
AVY+AM+ D DAVWL+QGWLF FW P Q+ A+L +VP G+++VLDLFAE +P++
Sbjct: 333 AVYQAMTAVDPDAVWLLQGWLFQHQPEFWGPAQVAAVLGAVPRGRLLVLDLFAESQPVYV 392
Query: 240 TSSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNP 299
++ F G P++WCMLHNFGGN ++G L+S+ GP AR NSTMVG GM EGI QN
Sbjct: 393 RTASFQGQPFIWCMLHNFGGNHGLFGALESVNQGPTTARHFPNSTMVGTGMAPEGIGQNE 452
Query: 300 VVYELMSEMAFRNEKVQVL-EWLKTYAHRRYGKAVPEVEATWEILYHTVYNCT-DGIADH 357
VVY LM+E+ ++ + V L W+ ++A RRYG + + EA W +L +VYNC+ + H
Sbjct: 453 VVYALMAELGWQKDPVADLGAWVTSFAARRYGVSHGDAEAAWRLLLRSVYNCSGEECRGH 512
Query: 358 NTDFIVKFP 366
N +V+ P
Sbjct: 513 NHSPLVRRP 521
Score = 151 (58.2 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 504 AKKLATNPSEMIQYEYNARTQVTMWYDTNITTQSKLHDYANKFWSGLLVDYYLPRASTYF 563
A A + +E YE N+R Q+T+W + + DYANK +GL+ DYY PR +
Sbjct: 551 ASSPAVSETEAHFYEQNSRYQLTLW-----GPEGNILDYANKQLAGLVADYYAPRWRLFT 605
Query: 564 DYMSKSLREKSEFQVDRWRQQWVFISISWQSNWKTGTKNYPIRAKGDSIAIAKVLYDKYF 623
+ + +SL + FQ ++ + + + + GT+ YP + +GD++ + K L+ KY+
Sbjct: 606 ETLVESLVQGVPFQQHQFDRN----AFQLEQTFVLGTRRYPSQPEGDTVDLVKKLFLKYY 661
Score = 43 (20.2 bits), Expect = 1.3e-115, Sum P(3) = 1.3e-115
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 409 LWYSNQELIKGLKLFLNAGNALA 431
+WY+ ++ + +L L A + LA
Sbjct: 529 VWYNRSDVFEAWRLLLTATSTLA 551
>DICTYBASE|DDB_G0291998 [details] [associations]
symbol:naglu "alpha-N-acetylglucosaminidase"
species:44689 "Dictyostelium discoideum" [GO:0006027
"glycosaminoglycan catabolic process" evidence=IC] [GO:0004561
"alpha-N-acetylglucosaminidase activity" evidence=ISS]
dictyBase:DDB_G0291998 Pfam:PF05089 GenomeReviews:CM000155_GR
EMBL:AAFI02000187 GO:GO:0006027 eggNOG:NOG86381 KO:K01205
OMA:LFPNSTM GO:GO:0004561 InterPro:IPR007781 InterPro:IPR024732
InterPro:IPR024240 InterPro:IPR024733 PANTHER:PTHR12872
Pfam:PF12972 Pfam:PF12971 RefSeq:XP_629757.1
ProteinModelPortal:Q54DW5 STRING:Q54DW5 EnsemblProtists:DDB0238329
GeneID:8628432 KEGG:ddi:DDB_G0291998 ProtClustDB:CLSZ2497091
Uniprot:Q54DW5
Length = 798
Score = 862 (308.5 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 171/378 (45%), Positives = 238/378 (62%)
Query: 1 MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
MAL G NLPLAF GQE IW +VF ++ + ++ + +GPAFL W RMGN++GWGGP+
Sbjct: 208 MALNGYNLPLAFVGQEYIWYRVFSELGLSFDQISTWLTGPAFLPWNRMGNVNGWGGPITL 267
Query: 61 NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
+WL +Q LQ KI+ RM + GM PVLP FAG++P A++++FP ANI+ L W +
Sbjct: 268 DWLEKQRDLQIKILERMRQYGMKPVLPGFAGHIPGAIQQLFPQANISVLSTWCNFNG--- 324
Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTD-IYNCDTFNENTPPTNDTNYISSLGA 179
T+ L+ TDPLF +I FI + I +G TD YN D FNE PP+NDT+Y+
Sbjct: 325 ---TFYLESTDPLFAKITTMFIGELIDVFG--TDHFYNFDPFNELEPPSNDTDYLRQTSQ 379
Query: 180 AVYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWR 239
++Y+ + D AVW++QGW FW+ Q +A VP+G ++VLDL+++V P W
Sbjct: 380 SMYENVLLADPKAVWVLQGWFIVDAPEFWQAKQTEAWFSGVPIGGVLVLDLWSDVIPGWT 439
Query: 240 TSSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDAR-VSENSTMVGVGMCMEGIEQN 298
T++ +YG +VWCMLHNFGG +YG L I+S P+ AR +S N MVG+G+ E IEQN
Sbjct: 440 TTNYYYGHYWVWCMLHNFGGRSGMYGRLPWISSNPITARGLSPN--MVGIGLTPEAIEQN 497
Query: 299 PVVYELMSEMAFRNEKVQVLEWLKTYAHRRYGKAVPEVEATWEILYHTVYNCTDGIADHN 358
VVY++MSEM++R+ + + EW+ Y HRRYGK VPE+ W L +TV+N T A N
Sbjct: 498 VVVYDMMSEMSWRSVQPNLTEWVTQYTHRRYGKLVPEIVDVWISLVNTVFNATAATARAN 557
Query: 359 TDFIVKFPDWDPSLLSGS 376
F P L G+
Sbjct: 558 MGAPESFIALRPQLTFGN 575
Score = 197 (74.4 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 52/170 (30%), Positives = 81/170 (47%)
Query: 435 TYRYDLVDITRQALSKLANQVYMDAVIAFQHKDASAFNIHSQKFLQLIKDIDELLASNDN 494
T+ +D+ + T Q+LS Y + AF D + S + L +I +DE+ ++ +
Sbjct: 604 TFEFDISEFTMQSLSNYFMDQYFLLIEAFNASDVQTLSTISIELLDIINYMDEIASTQSS 663
Query: 495 FLLGTWLESAKKLA--TNPSEMIQ---------YEYNARTQVTMWYDTNITTQSKLHDYA 543
LG W A+ A TN +Q YE+NAR +T+W +N S LHDYA
Sbjct: 664 LQLGLWTYRARLWAYPTNDIPTLQNSSNSNTAPYEFNARNVLTLWGPSN----SVLHDYA 719
Query: 544 NKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQ-------VDRWRQQWV 586
K WSGL+ D+Y PR + + +S+ + F V+ +QWV
Sbjct: 720 FKLWSGLVSDFYSPRWQLFLKSLVQSVENRKPFNKESFNRMVENLEEQWV 769
>FB|FBgn0014417 [details] [associations]
symbol:CG13397 species:7227 "Drosophila melanogaster"
[GO:0004561 "alpha-N-acetylglucosaminidase activity" evidence=ISS]
Pfam:PF05089 EMBL:AE014134 CAZy:GH89 eggNOG:NOG86381 KO:K01205
OMA:LFPNSTM GO:GO:0004561 InterPro:IPR007781 InterPro:IPR024732
InterPro:IPR024240 InterPro:IPR024733 PANTHER:PTHR12872
Pfam:PF12972 Pfam:PF12971 EMBL:AY058738 RefSeq:NP_652045.1
UniGene:Dm.4228 SMR:Q9VLL5 MINT:MINT-996629 STRING:Q9VLL5
EnsemblMetazoa:FBtr0079711 EnsemblMetazoa:FBtr0331991 GeneID:46386
KEGG:dme:Dmel_CG13397 UCSC:CG13397-RA FlyBase:FBgn0014417
GeneTree:ENSGT00390000005900 InParanoid:Q9VLL5 OrthoDB:EOG422810
ChiTaRS:CG13397 GenomeRNAi:46386 NextBio:838826 Uniprot:Q9VLL5
Length = 778
Score = 740 (265.6 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 141/349 (40%), Positives = 209/349 (59%)
Query: 1 MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
MAL GI+L +A QEAIW KV+ + + ME++++ +GPAF AW RMGN+ GW GPL
Sbjct: 177 MALMGISLTIA-PVQEAIWVKVYTDMGLRMEEIDEHLAGPAFQAWQRMGNIRGWAGPLTP 235
Query: 61 NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
W QL+LQ++I++ LGM+ LP+FAG+VP ALK++ P + + WN R
Sbjct: 236 AWRRYQLLLQQEIITAQRNLGMSVALPAFAGHVPRALKRLNPESTFMEVQRWNQFP--DR 293
Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTDIYNCDTFNENTPPTNDTNYISSLGAA 180
+CC ++PT+ LF EI F+ I +YG I+ CD FNE PP Y+ S AA
Sbjct: 294 YCCGLFVEPTENLFKEIASRFLHNIITKYGS-NHIFFCDPFNELEPPVAKPEYMRSTAAA 352
Query: 181 VYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWRT 240
+Y++M D A+WL+QGW+F + FW +A L + P G+++VLDL +E P +
Sbjct: 353 IYESMRGIDPQAIWLLQGWMFVKNP-FWTTDMAEAFLTAAPRGRILVLDLQSEQFPQYEL 411
Query: 241 SSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNPV 300
+ ++G P++WCMLHNFGG + ++G I SG +AR NS++VG G+ EGI QN V
Sbjct: 412 TRSYFGQPFIWCMLHNFGGTLGMFGSAKLINSGIEEARRLPNSSLVGTGITPEGIGQNYV 471
Query: 301 VYELMSEMAFRNEKVQVLEWLKTYAHRRYGKAVPEVEATWEILYHTVYN 349
+Y E + N + + W ++H RYG +E W +L ++VY+
Sbjct: 472 MYSFTLERGWSNTSLDLDSWFTNFSHSRYGVKDERLEQAWLLLKNSVYS 520
Score = 278 (102.9 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 64/191 (33%), Positives = 106/191 (55%)
Query: 436 YRYDLVDITRQALSKLANQVYMDAVIAFQHKDASAFNIHSQKFLQLIKDIDELLASNDNF 495
Y +DLVDITRQ L A+Q+Y++ A++ + S F S K L+L D++ +LAS+ NF
Sbjct: 576 YEHDLVDITRQFLQISADQLYINLRSAYRKRQVSRFEFLSVKLLKLFDDMELILASSRNF 635
Query: 496 LLGTWLESAKKLATNPSEMIQYEYNARTQVTMWYDTNITTQSKLHDYANKFWSGLLVDYY 555
LLG WL+ AK+ A N + +E+NAR Q+T W ++ DYA K WSGL+ DYY
Sbjct: 636 LLGNWLQQAKQAAPNTGQQRNFEFNARNQITAW-----GPDGQILDYACKQWSGLVSDYY 690
Query: 556 LPRASTYFDYMSKSLREKSEFQVDRWRQQWVFISISWQSNWKTGTKN--YPIRAKGDSIA 613
PR + + ++ +L F ++ + +S + K+ YP+ G++
Sbjct: 691 RPRWRLFLEDVTVALHAGRPFNGTAFK-----LKVSHEIELPFSNKDDVYPVTPVGNTWL 745
Query: 614 IAKVLYDKYFG 624
I++ +++ + G
Sbjct: 746 ISQDIFETWKG 756
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 629 629 0.00091 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 636 (68 KB)
Total size of DFA: 406 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.62u 0.10s 49.72t Elapsed: 00:00:02
Total cpu time: 49.62u 0.10s 49.72t Elapsed: 00:00:02
Start: Mon May 20 18:00:14 2013 End: Mon May 20 18:00:16 2013