Query 006847
Match_columns 629
No_of_seqs 50 out of 52
Neff 2.4
Searched_HMMs 29240
Date Mon Mar 25 10:32:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006847.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006847hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.7E-27 5.9E-32 209.5 11.1 126 324-449 18-159 (169)
2 1awc_B Protein (GA binding pro 99.9 6.6E-26 2.3E-30 188.3 9.9 123 324-446 16-153 (153)
3 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.5E-25 5.3E-30 189.5 11.1 126 323-448 27-168 (169)
4 1ihb_A P18-INK4C(INK6), cyclin 99.9 1E-25 3.4E-30 186.3 9.1 125 324-449 19-160 (162)
5 3v31_A Ankyrin repeat family A 99.9 9.4E-26 3.2E-30 188.6 8.5 129 324-452 17-161 (167)
6 3v30_A DNA-binding protein rfx 99.9 1.3E-25 4.6E-30 188.5 9.4 130 324-453 16-162 (172)
7 2rfm_A Putative ankyrin repeat 99.9 1.5E-25 5E-30 191.9 9.0 125 324-448 49-189 (192)
8 1oy3_D Transcription factor in 99.9 6.8E-25 2.3E-29 193.6 9.8 126 324-449 59-248 (282)
9 1d9s_A Cyclin-dependent kinase 99.9 4.6E-25 1.6E-29 181.2 7.9 111 337-448 12-133 (136)
10 3jxi_A Vanilloid receptor-rela 99.9 2E-25 6.9E-30 198.0 6.1 130 324-453 63-252 (260)
11 3twr_A Tankyrase-2; ankyrin re 99.9 1E-24 3.6E-29 182.0 10.0 125 324-449 22-163 (165)
12 2rfa_A Transient receptor pote 99.9 2.4E-24 8.1E-29 187.6 11.8 127 324-450 17-182 (232)
13 1ikn_D Protein (I-kappa-B-alph 99.9 1.1E-24 3.7E-29 191.4 9.1 129 324-452 59-210 (236)
14 4b93_B Ankyrin repeat domain-c 99.9 1.2E-24 4E-29 202.1 9.0 128 322-449 65-208 (269)
15 1s70_B 130 kDa myosin-binding 99.9 2.1E-24 7.3E-29 193.9 10.3 125 325-449 55-255 (299)
16 2f8y_A Notch homolog 1, transl 99.9 2E-24 6.8E-29 186.4 9.7 126 324-449 39-181 (223)
17 3hra_A Ankyrin repeat family p 99.9 3.1E-24 1.1E-28 182.5 10.5 126 323-448 52-200 (201)
18 2pnn_A Transient receptor pote 99.9 8.2E-25 2.8E-29 196.7 7.1 126 324-449 71-256 (273)
19 3kea_A K1L; tropism, ANK repea 99.9 4.5E-24 1.5E-28 197.0 12.0 155 323-482 13-183 (285)
20 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.6E-24 1.2E-28 176.6 10.1 124 324-449 16-156 (156)
21 2jab_A H10-2-G3; HER2, darpin, 99.9 1.8E-24 6.2E-29 177.6 8.3 112 337-448 14-135 (136)
22 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.4E-24 8.1E-29 169.0 8.6 114 336-449 1-124 (126)
23 1oy3_D Transcription factor in 99.9 2.5E-24 8.6E-29 190.0 9.4 126 324-449 23-215 (282)
24 2rfm_A Putative ankyrin repeat 99.9 3E-24 1E-28 183.7 9.3 131 320-450 18-158 (192)
25 2rfa_A Transient receptor pote 99.9 2.7E-24 9.1E-29 187.3 9.1 129 324-452 51-223 (232)
26 2xai_A ASB-9, ankyrin repeat a 99.9 3.8E-24 1.3E-28 192.9 10.3 127 324-450 17-158 (261)
27 3aji_A 26S proteasome non-ATPa 99.9 5.4E-24 1.8E-28 184.6 10.7 126 324-449 54-195 (231)
28 1yyh_A HN1;, notch 1, ankyrin 99.9 4.1E-24 1.4E-28 191.4 9.6 129 324-452 104-249 (253)
29 3f6q_A Integrin-linked protein 99.9 5.7E-24 1.9E-28 180.8 9.8 127 324-450 19-162 (179)
30 2f8y_A Notch homolog 1, transl 99.9 8.2E-24 2.8E-28 182.6 10.8 126 324-449 72-214 (223)
31 2etb_A Transient receptor pote 99.9 1.2E-24 4E-29 193.4 5.3 130 324-453 60-248 (256)
32 3jxi_A Vanilloid receptor-rela 99.9 1.3E-24 4.4E-29 192.9 5.5 129 321-449 20-208 (260)
33 2etb_A Transient receptor pote 99.9 3.2E-24 1.1E-28 190.5 8.1 129 321-449 17-204 (256)
34 1wdy_A 2-5A-dependent ribonucl 99.9 8.7E-24 3E-28 184.9 10.4 126 324-449 19-171 (285)
35 3kea_A K1L; tropism, ANK repea 99.9 7.1E-24 2.4E-28 195.7 10.4 129 324-452 76-221 (285)
36 1yyh_A HN1;, notch 1, ankyrin 99.9 9.3E-24 3.2E-28 189.1 10.8 126 324-449 71-213 (253)
37 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-24 4.4E-29 194.8 5.1 126 324-449 19-162 (239)
38 1k1a_A B-cell lymphoma 3-encod 99.9 1.3E-23 4.5E-28 182.0 10.7 126 324-449 60-206 (241)
39 1bi7_B P16INK4A, MTS1, multipl 99.9 5.2E-24 1.8E-28 178.6 7.3 115 336-451 11-136 (156)
40 3utm_A Tankyrase-1; tankyrase, 99.9 1.4E-23 4.9E-28 189.4 10.7 126 324-449 72-270 (351)
41 4gpm_A Engineered protein OR26 99.9 6.8E-24 2.3E-28 186.7 7.9 112 339-450 6-127 (169)
42 2vge_A RELA-associated inhibit 99.9 7.1E-24 2.4E-28 192.1 7.9 124 326-449 1-146 (229)
43 3aji_A 26S proteasome non-ATPa 99.9 9E-24 3.1E-28 183.2 8.1 126 324-449 87-228 (231)
44 1n11_A Ankyrin; clathrin, BAND 99.9 9.9E-24 3.4E-28 201.0 9.1 124 325-448 29-168 (437)
45 4b93_B Ankyrin repeat domain-c 99.9 1.2E-23 4.2E-28 195.2 9.4 126 324-449 100-242 (269)
46 2dzn_A Probable 26S proteasome 99.9 1.8E-23 6.3E-28 180.3 9.8 110 337-446 72-194 (228)
47 3d9h_A CDNA FLJ77766, highly s 99.9 2E-23 6.7E-28 192.2 10.5 127 324-450 73-214 (285)
48 3v31_A Ankyrin repeat family A 99.9 1.7E-23 5.9E-28 174.9 9.2 114 337-450 3-126 (167)
49 3b7b_A Euchromatic histone-lys 99.9 2.3E-23 7.8E-28 181.3 10.3 127 324-450 25-168 (237)
50 3c5r_A BARD-1, BRCA1-associate 99.9 7E-24 2.4E-28 173.2 6.7 114 337-450 10-133 (137)
51 2xai_A ASB-9, ankyrin repeat a 99.9 2.3E-23 7.8E-28 187.9 10.4 126 324-449 50-189 (261)
52 3b7b_A Euchromatic histone-lys 99.9 2.8E-23 9.6E-28 180.8 10.5 127 324-450 58-201 (237)
53 2dzn_A Probable 26S proteasome 99.9 2.2E-23 7.4E-28 179.9 9.2 127 324-450 16-164 (228)
54 3ljn_A Hypothetical protein; a 99.9 1.6E-23 5.5E-28 195.6 8.5 126 324-449 67-234 (364)
55 3ljn_A Hypothetical protein; a 99.9 2.4E-23 8.2E-28 194.4 9.5 116 337-452 138-270 (364)
56 2pnn_A Transient receptor pote 99.9 1.1E-23 3.7E-28 189.4 6.6 129 321-449 28-216 (273)
57 1k1a_A B-cell lymphoma 3-encod 99.9 1.1E-22 3.7E-27 176.3 11.3 130 320-449 23-173 (241)
58 3hra_A Ankyrin repeat family p 99.9 7.2E-23 2.5E-27 174.1 10.0 126 325-450 20-169 (201)
59 1awc_B Protein (GA binding pro 99.9 4.4E-23 1.5E-27 171.4 8.3 114 337-450 2-124 (153)
60 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.6E-23 9E-28 171.9 6.5 116 335-451 3-128 (162)
61 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.4E-23 1.8E-27 173.9 8.4 114 337-450 14-137 (169)
62 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.5E-23 1.9E-27 169.6 8.2 111 337-448 2-123 (156)
63 3d9h_A CDNA FLJ77766, highly s 99.9 9.7E-23 3.3E-27 187.6 10.6 126 324-449 106-245 (285)
64 4g8k_A 2-5A-dependent ribonucl 99.9 9.6E-23 3.3E-27 188.5 10.5 113 337-449 168-296 (337)
65 3utm_A Tankyrase-1; tankyrase, 99.9 9.5E-23 3.3E-27 184.0 10.0 156 325-483 40-270 (351)
66 4hbd_A KN motif and ankyrin re 99.9 5.1E-23 1.7E-27 189.7 8.3 126 324-449 125-273 (276)
67 3twr_A Tankyrase-2; ankyrin re 99.9 4.8E-23 1.6E-27 171.9 7.0 115 336-450 7-132 (165)
68 1n11_A Ankyrin; clathrin, BAND 99.9 1.5E-22 5.3E-27 192.8 11.2 126 324-449 226-367 (437)
69 3ehr_A Osteoclast-stimulating 99.9 7E-23 2.4E-27 179.5 7.1 116 335-450 71-197 (222)
70 3aaa_C Myotrophin, protein V-1 99.9 1E-22 3.5E-27 164.2 7.4 106 337-442 7-122 (123)
71 3eu9_A Huntingtin-interacting 99.9 3.2E-22 1.1E-26 171.5 10.8 128 324-451 90-235 (240)
72 1ikn_D Protein (I-kappa-B-alph 99.9 2.9E-23 1E-27 182.3 4.4 113 337-449 45-174 (236)
73 1wdy_A 2-5A-dependent ribonucl 99.9 2.8E-22 9.4E-27 175.4 10.2 127 324-450 119-277 (285)
74 1sw6_A Regulatory protein SWI6 99.9 1.5E-22 5.2E-27 190.7 9.1 131 320-450 107-307 (327)
75 3f6q_A Integrin-linked protein 99.9 1.8E-22 6.3E-27 171.5 8.4 115 335-449 3-128 (179)
76 3deo_A Signal recognition part 99.9 1.4E-22 4.7E-27 174.5 7.2 103 336-438 43-155 (183)
77 3v30_A DNA-binding protein rfx 99.9 2.5E-22 8.6E-27 168.6 8.4 113 337-449 2-125 (172)
78 2aja_A Ankyrin repeat family p 99.9 5E-23 1.7E-27 204.3 4.5 150 324-482 80-247 (376)
79 2fo1_E LIN-12 protein; beta-ba 99.9 2.2E-22 7.5E-27 192.3 8.3 124 325-448 181-335 (373)
80 2fo1_E LIN-12 protein; beta-ba 99.9 4.3E-22 1.5E-26 190.3 8.8 128 324-451 213-371 (373)
81 3eu9_A Huntingtin-interacting 99.9 1.1E-21 3.7E-26 168.1 9.9 126 324-449 56-200 (240)
82 2vge_A RELA-associated inhibit 99.9 4.1E-23 1.4E-27 187.1 0.4 128 324-451 35-214 (229)
83 2aja_A Ankyrin repeat family p 99.9 6.3E-23 2.2E-27 203.5 1.5 123 324-450 106-249 (376)
84 3ui2_A Signal recognition part 99.9 3.4E-22 1.2E-26 181.2 5.9 114 336-449 44-183 (244)
85 4hbd_A KN motif and ankyrin re 99.9 1.1E-21 3.7E-26 180.9 9.2 120 328-447 102-237 (276)
86 1s70_B 130 kDa myosin-binding 99.8 1.7E-21 5.9E-26 175.0 9.6 114 337-450 40-163 (299)
87 3t8k_A Uncharacterized protein 99.8 4.7E-22 1.6E-26 176.9 5.0 126 326-451 22-179 (186)
88 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.4E-21 4.8E-26 151.7 6.8 87 336-422 1-93 (93)
89 1ycs_B 53BP2, P53BP2; ankyrin 99.8 5.1E-22 1.8E-26 178.0 4.3 116 337-452 5-129 (239)
90 4g8k_A 2-5A-dependent ribonucl 99.8 6.1E-21 2.1E-25 176.5 10.4 125 324-448 39-190 (337)
91 1d9s_A Cyclin-dependent kinase 99.8 1.8E-21 6E-26 159.9 6.0 99 323-422 25-136 (136)
92 1bi7_B P16INK4A, MTS1, multipl 99.8 1.2E-21 4.1E-26 164.3 4.1 110 323-433 25-151 (156)
93 1n0r_A 4ANK, 4 ankyrin repeats 99.8 8.1E-21 2.8E-25 148.9 8.4 99 324-422 16-126 (126)
94 2jab_A H10-2-G3; HER2, darpin, 99.8 1.2E-20 4.3E-25 154.8 8.1 97 324-420 28-136 (136)
95 1sw6_A Regulatory protein SWI6 99.8 6.7E-21 2.3E-25 179.6 7.0 114 324-437 145-327 (327)
96 2b0o_E UPLC1; arfgap, structur 99.8 1.9E-20 6.6E-25 177.7 7.1 113 325-439 166-299 (301)
97 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.2E-19 4E-24 140.8 5.9 82 368-449 1-91 (93)
98 3lvq_E ARF-GAP with SH3 domain 99.8 2.7E-19 9.1E-24 179.4 9.1 113 324-438 146-279 (497)
99 3lvq_E ARF-GAP with SH3 domain 99.8 1.8E-19 6.3E-24 180.5 7.7 116 337-452 132-266 (497)
100 1dcq_A PYK2-associated protein 99.8 3.1E-19 1E-23 167.3 8.0 113 337-449 130-261 (278)
101 2b0o_E UPLC1; arfgap, structur 99.8 3.2E-19 1.1E-23 169.3 7.6 222 208-449 25-282 (301)
102 2l6b_A NR1C; ankyrin, consensu 99.8 1.9E-19 6.4E-24 143.1 5.0 87 336-422 8-100 (115)
103 3jue_A Arfgap with coiled-coil 99.8 3.2E-19 1.1E-23 176.9 7.9 113 337-449 199-324 (368)
104 1dcq_A PYK2-associated protein 99.8 5.1E-19 1.7E-23 165.8 7.5 98 326-423 146-264 (278)
105 3t8k_A Uncharacterized protein 99.7 1.3E-18 4.6E-23 154.7 6.1 110 337-447 6-141 (186)
106 3ehr_A Osteoclast-stimulating 99.7 6.1E-19 2.1E-23 154.6 2.0 100 324-423 87-199 (222)
107 3c5r_A BARD-1, BRCA1-associate 99.7 1E-17 3.6E-22 136.7 6.8 87 364-450 5-100 (137)
108 3aaa_C Myotrophin, protein V-1 99.7 1.2E-17 4.3E-22 134.5 5.5 87 365-451 3-98 (123)
109 2l6b_A NR1C; ankyrin, consensu 99.7 1.2E-17 4.3E-22 132.6 5.3 87 365-451 5-100 (115)
110 3deo_A Signal recognition part 99.7 2.2E-17 7.6E-22 142.1 6.4 112 324-449 58-182 (183)
111 2zgd_A 3 repeat synthetic anky 99.7 2.3E-17 7.9E-22 132.7 6.0 80 337-416 24-109 (110)
112 3ui2_A Signal recognition part 99.7 1.7E-17 6E-22 150.4 5.8 98 324-422 59-185 (244)
113 3jue_A Arfgap with coiled-coil 99.7 3E-17 1E-21 162.9 7.8 115 324-438 214-349 (368)
114 2zgd_A 3 repeat synthetic anky 99.7 2.6E-17 8.8E-22 132.4 5.3 84 363-446 18-110 (110)
115 1xhj_A Nitrogen fixation prote 27.9 8.2 0.00028 32.9 -1.1 33 184-220 39-71 (88)
116 1h0h_B Formate dehydrogenase ( 25.9 31 0.0011 32.1 2.3 31 192-223 151-181 (214)
117 2fgo_A Ferredoxin; allochromat 23.8 14 0.00047 28.5 -0.5 16 191-206 47-62 (82)
118 1veh_A NIFU-like protein hirip 21.4 13 0.00046 31.8 -1.1 34 184-221 46-79 (92)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=1.7e-27 Score=209.52 Aligned_cols=126 Identities=27% Similarity=0.297 Sum_probs=117.8
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
..+++|++.|+|. |+|||++|+.+|+.++|++||+. |+.+.+|.+|.|||++|+.+|+.++|++|++.| |++
T Consensus 18 ~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn 97 (169)
T 4gpm_A 18 DRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN 97 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 4678999999994 99999999999999999999999 668999999999999999999999999999999 655
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.|+||||+|+++|+.++|++|++.|++ +..|.|||+.|+..++.++++||+++.
T Consensus 98 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 98 AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQG 159 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 799999999999999999999999997 678999999999999999999999874
No 2
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=6.6e-26 Score=188.28 Aligned_cols=123 Identities=19% Similarity=0.211 Sum_probs=113.6
Q ss_pred HHHHHHHhcCCCC-----cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-
Q 006847 324 GLLGLLVEGGADN-----VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV- 395 (629)
Q Consensus 324 gLlKsLIEgGaD~-----gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e- 395 (629)
..+++|++.|+|. |+|||++|+.+|++|+|++|++. ++.+..|.+|.|||++|+.+|+.++|++|++.| +++
T Consensus 16 ~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 95 (153)
T 1awc_B 16 DEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNA 95 (153)
T ss_dssp HHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC
T ss_pred HHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCC
Confidence 4678899999884 89999999999999999999998 568889999999999999999999999999999 544
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhh
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLL 446 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLL 446 (629)
.|.||||.|+++|+.++|+||++.|++ +..|.|||+.|+..++.++++||.
T Consensus 96 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 96 KDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 799999999999999999999999996 567999999999999999999983
No 3
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=1.5e-25 Score=189.45 Aligned_cols=126 Identities=24% Similarity=0.249 Sum_probs=116.5
Q ss_pred HHHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 323 QGLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 323 qgLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
..++++|++.|+|. |+|||++|+.+|+.|+|++||+. ++.+..|.+|.|||++|+.+|+.+++++|++.| +.
T Consensus 27 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 106 (169)
T 2y1l_E 27 DDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV 106 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 35688999999984 89999999999999999999998 568889999999999999999999999999999 44
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
+ .|.||||.|+++|+.++|+||++.|++ +..|.|||+.|+..++.+++++|+..
T Consensus 107 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 107 NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 3 799999999999999999999999997 56799999999999999999999874
No 4
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1e-25 Score=186.32 Aligned_cols=125 Identities=21% Similarity=0.140 Sum_probs=114.9
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
..+++|++.|+|. |+|||+.|+. |+.|+|++||+. ++.+..|.+|.|||++|+.+|+.++|++|++.| +++
T Consensus 19 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 97 (162)
T 1ihb_A 19 EQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN 97 (162)
T ss_dssp HHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5678899999984 9999999999 999999999998 568889999999999999999999999999999 544
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc-----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR-----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd-----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.|.||||.|+++|+.++|+||++.|++ +..|.|||+.|+..++.++++||+.+.
T Consensus 98 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 98 IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 799999999999999999999999996 457999999999999999999999764
No 5
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=9.4e-26 Score=188.59 Aligned_cols=129 Identities=18% Similarity=0.129 Sum_probs=118.0
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++|++. ++.+..|.+|.|||++|+.+|+.++|++|++.| +++
T Consensus 17 ~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 96 (167)
T 3v31_A 17 LYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVN 96 (167)
T ss_dssp HHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 4677888988874 89999999999999999999998 568889999999999999999999999999999 444
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCChh
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQH 452 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq~ 452 (629)
.|.||||.|+.+|+.++|+||++.|++ +..|.|||+.|+..++.++++||+++.++.
T Consensus 97 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 97 EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 799999999999999999999999996 567999999999999999999999887653
No 6
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.92 E-value=1.3e-25 Score=188.45 Aligned_cols=130 Identities=22% Similarity=0.181 Sum_probs=117.9
Q ss_pred HHHHHHHhcCCCC-------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN-------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~-------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
..++.|++.|.+. |+|||++|+.+|++|+|++||+. ++.+..|.+|.|||++|+.+|+.++|++|++.| +.
T Consensus 16 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 95 (172)
T 3v30_A 16 DQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDI 95 (172)
T ss_dssp HHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred HHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 4567788877762 89999999999999999999998 568889999999999999999999999999999 54
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCChhh
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQHV 453 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq~v 453 (629)
+ .|.||||.|+++|+.++|++|++.|++ +..|.|||+.|+..++.+++++|+.+.++..
T Consensus 96 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 96 NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 4 799999999999999999999999997 5679999999999999999999999876543
No 7
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=1.5e-25 Score=191.87 Aligned_cols=125 Identities=19% Similarity=0.143 Sum_probs=108.6
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++|++. ++.+..|.+|.|||++|+.+|+.++|++|++.| +++
T Consensus 49 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 128 (192)
T 2rfm_A 49 NAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN 128 (192)
T ss_dssp GGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 3567888888873 88999999999999999999988 557888899999999999999999999999999 443
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
.|.||||.|+++|+.++|++|++.|++ +..|.|||+.|+..++.++++||+.+
T Consensus 129 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 129 DRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 789999999999999999999999996 56788999999999999999999864
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.91 E-value=6.8e-25 Score=193.60 Aligned_cols=126 Identities=21% Similarity=0.124 Sum_probs=103.1
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH--------------------------------------
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-------------------------------------- 359 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-------------------------------------- 359 (629)
.++++|++.|+|. |.|||++|+++|+.|+|++|++.
T Consensus 59 ~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (282)
T 1oy3_D 59 STVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPEN 138 (282)
T ss_dssp HHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------------------
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccch
Confidence 4677888888884 88888888888888888888873
Q ss_pred ----------hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-----ccchHHHHHHHhCCchHHHHHHHhCcc-
Q 006847 360 ----------AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV-----AFLGPLMRAAERGCMQVVQWFVKRGCR- 422 (629)
Q Consensus 360 ----------A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e-----~G~TPLI~ASenGhLEVVKYLIS~GAd- 422 (629)
+..+..+.+|.|||++|+++|+.++|++|++.| +++ .|.||||+|+++|+.++|++|++.|++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 218 (282)
T 1oy3_D 139 EEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218 (282)
T ss_dssp -----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred hhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 124567778888888888888888888888888 433 388888888888888888888888886
Q ss_pred ---ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 423 ---DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 423 ---d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+..|.|||+.|+..++.+++++|+.+.
T Consensus 219 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 248 (282)
T 1oy3_D 219 TARMYGGRTPLGSALLRPNPILARLLRAHG 248 (282)
T ss_dssp TCCCTTSCCHHHHHHTSSCHHHHHHHHHTT
T ss_pred cccccCCCCHHHHHHHcCCcHHHHHHHHcC
Confidence 556888888888888888888888775
No 9
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=4.6e-25 Score=181.19 Aligned_cols=111 Identities=23% Similarity=0.252 Sum_probs=104.4
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----c-cchHHHHHHHhCC
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----A-FLGPLMRAAERGC 409 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~-G~TPLI~ASenGh 409 (629)
|.|||++|+++|++|+|++||+. ++.+.+|.+|.|||++|+. |+.++|++|++.| +++ . |.||||+|+.+|+
T Consensus 12 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 90 (136)
T 1d9s_A 12 SDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGF 90 (136)
T ss_dssp CSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTC
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCC
Confidence 89999999999999999999998 5688899999999999999 9999999999999 544 5 8999999999999
Q ss_pred chHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 410 MQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 410 LEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
.++|++|++.|++ +..|.|||+.|+..++.++++||+.+
T Consensus 91 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 91 LDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp HHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999997 56799999999999999999999875
No 10
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=2e-25 Score=198.05 Aligned_cols=130 Identities=11% Similarity=0.059 Sum_probs=115.0
Q ss_pred HHHHHHHhcCCC-----------------CcchhHHHHhhcCCHHHHHHHHHH-hhhhccc--------------CCcch
Q 006847 324 GLLGLLVEGGAD-----------------NVNQCFLEASRFGSTELVRILLQI-AQRNSLD--------------VDVDL 371 (629)
Q Consensus 324 gLlKsLIEgGaD-----------------~gnTPLL~AS~~GhLEVVKyLISI-A~knak~--------------~DgdT 371 (629)
.++++|++.|+| .|.|||++|+.+|++|+|++||+. |+.+..+ .+|.|
T Consensus 63 ~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~t 142 (260)
T 3jxi_A 63 DTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGEL 142 (260)
T ss_dssp THHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSS
T ss_pred HHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCC
Confidence 356777777764 599999999999999999999998 5678777 68999
Q ss_pred hhHHhhhcCccceehhhhc---cC-Ccc----ccchHHHHHHHhCC---------chHHHHHHHhCcc-----------c
Q 006847 372 ALGFASHYCKIGTMECLVE---EG-NAV----AFLGPLMRAAERGC---------MQVVQWFVKRGCR-----------D 423 (629)
Q Consensus 372 pLi~AS~nGhLEVVKYLIS---~G-d~e----~G~TPLI~ASenGh---------LEVVKYLIS~GAd-----------d 423 (629)
|||+|+.+|+.++|++|++ .| +++ .|+||||+|++.|+ .++|++|++.|++ +
T Consensus 143 pL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d 222 (260)
T 3jxi_A 143 PLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLN 222 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhccc
Confidence 9999999999999999999 78 554 79999999999887 7999999999985 3
Q ss_pred cccCchhhHhhhcChHHHHHhhhcCCChhh
Q 006847 424 MDLCLALTAATSSSQVEVAAYLLPHVPQHV 453 (629)
Q Consensus 424 ~~g~taL~tA~s~gq~eVVkYLLS~vPq~v 453 (629)
..|.|||+.|+..|+.+++++|+.+.+.+.
T Consensus 223 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 223 NDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 579999999999999999999999886543
No 11
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=1e-24 Score=181.95 Aligned_cols=125 Identities=19% Similarity=0.204 Sum_probs=110.1
Q ss_pred HHHHHHHh-cCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVE-GGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIE-gGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
..++.|++ ++.+. |+|||++|+.+|++|+|++|++. ++.+..|.+|.|||++|+.+|+.++|++|++.| ++
T Consensus 22 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 101 (165)
T 3twr_A 22 ETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV 101 (165)
T ss_dssp HHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Confidence 35677887 44332 78999999999999999999998 568889999999999999999999999999999 54
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ .|.|||++|+++|+.++|++|++.|++ +..|.|||+.|.. ++.++++||+...
T Consensus 102 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 102 NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 4 799999999999999999999999996 6689999999888 8899999998763
No 12
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.91 E-value=2.4e-24 Score=187.58 Aligned_cols=127 Identities=20% Similarity=0.146 Sum_probs=113.0
Q ss_pred HHHHHHHhc-CCCC------cchhHHHHhhcCCHHHHHHHHHHh-hh-----hcccCCcchhhHHhhhcCccceehhhhc
Q 006847 324 GLLGLLVEG-GADN------VNQCFLEASRFGSTELVRILLQIA-QR-----NSLDVDVDLALGFASHYCKIGTMECLVE 390 (629)
Q Consensus 324 gLlKsLIEg-GaD~------gnTPLL~AS~~GhLEVVKyLISIA-~k-----nak~~DgdTpLi~AS~nGhLEVVKYLIS 390 (629)
.++++|++. |+|. |+|||++|+.+|+.|+|++||+.. +. +..|.+|.|||++|+.+|+.++|++|++
T Consensus 17 ~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 96 (232)
T 2rfa_A 17 QALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLA 96 (232)
T ss_dssp HHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHh
Confidence 467888886 8884 999999999999999999999983 33 5678899999999999999999999999
Q ss_pred cC-Ccc-----------------ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHH----Hh
Q 006847 391 EG-NAV-----------------AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVA----AY 444 (629)
Q Consensus 391 ~G-d~e-----------------~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVV----kY 444 (629)
.| +++ .|.||||.|+++|+.++|++|++.|++ +..|.||||.|+..++.+++ ++
T Consensus 97 ~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~ 176 (232)
T 2rfa_A 97 RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNL 176 (232)
T ss_dssp TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHH
T ss_pred CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHH
Confidence 99 443 399999999999999999999999997 67899999999999999998 88
Q ss_pred hhcCCC
Q 006847 445 LLPHVP 450 (629)
Q Consensus 445 LLS~vP 450 (629)
|+++..
T Consensus 177 Ll~~g~ 182 (232)
T 2rfa_A 177 LLSYDG 182 (232)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 877654
No 13
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.91 E-value=1.1e-24 Score=191.38 Aligned_cols=129 Identities=18% Similarity=0.113 Sum_probs=117.7
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHHhh-------hhcccCCcchhhHHhhhcCccceehhhhc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQIAQ-------RNSLDVDVDLALGFASHYCKIGTMECLVE 390 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISIA~-------knak~~DgdTpLi~AS~nGhLEVVKYLIS 390 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++|++... .+..+.+|.|||++|+.+|+.++|++|++
T Consensus 59 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 138 (236)
T 1ikn_D 59 EIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS 138 (236)
T ss_dssp HHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5788999999984 8999999999999999999999843 46788899999999999999999999999
Q ss_pred cC-Ccc-----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCChh
Q 006847 391 EG-NAV-----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQH 452 (629)
Q Consensus 391 ~G-d~e-----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq~ 452 (629)
.| +++ .|.||||+|+++|+.++|+||++.|++ +..|.|||+.|+..++.++++||+.+...+
T Consensus 139 ~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 139 LGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 99 433 799999999999999999999999997 567999999999999999999999987654
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.91 E-value=1.2e-24 Score=202.07 Aligned_cols=128 Identities=22% Similarity=0.270 Sum_probs=110.6
Q ss_pred HHHHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-C
Q 006847 322 IQGLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-N 393 (629)
Q Consensus 322 iqgLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d 393 (629)
.+.++++|++.|+|. |+|||++|+++|+.|+|++||+. |+.+..+.+|.|||++|+.+++.+++++|++.| +
T Consensus 65 ~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 144 (269)
T 4b93_B 65 AQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK 144 (269)
T ss_dssp ----------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCC
Confidence 345788999999984 99999999999999999999998 668889999999999999999999999999999 5
Q ss_pred cc----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 394 AV----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 394 ~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
++ .|.||||+|+++|+.++|++|++.|++ +..|.||||.|+..|+.++|++|+.+.
T Consensus 145 ~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G 208 (269)
T 4b93_B 145 PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHG 208 (269)
T ss_dssp SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 54 799999999999999999999999997 567999999999999999999999875
No 15
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.91 E-value=2.1e-24 Score=193.88 Aligned_cols=125 Identities=22% Similarity=0.207 Sum_probs=84.6
Q ss_pred HHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-
Q 006847 325 LLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV- 395 (629)
Q Consensus 325 LlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e- 395 (629)
++++|++.|+|. |.|||++|+.+|+.|+|++||+. |+.+..|.+|.|||++|+.+|+.++|++|++.| +++
T Consensus 55 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 134 (299)
T 1s70_B 55 EVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA 134 (299)
T ss_dssp HHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 556666767663 66777777777777777777776 446666777777777777777777777777766 322
Q ss_pred ---------------------------------------------------------------ccchHHHHHHHhCCchH
Q 006847 396 ---------------------------------------------------------------AFLGPLMRAAERGCMQV 412 (629)
Q Consensus 396 ---------------------------------------------------------------~G~TPLI~ASenGhLEV 412 (629)
.|.||||.|+++|+.++
T Consensus 135 ~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 214 (299)
T 1s70_B 135 VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEV 214 (299)
T ss_dssp CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHH
T ss_pred cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHH
Confidence 35667777777777777
Q ss_pred HHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 413 VQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 413 VKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
|++|++.|++ +..|.||||.|+..++.+++++|+.+.
T Consensus 215 v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 255 (299)
T 1s70_B 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255 (299)
T ss_dssp HHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC
Confidence 7777777764 445667777777777777777776553
No 16
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=2e-24 Score=186.39 Aligned_cols=126 Identities=20% Similarity=0.140 Sum_probs=98.1
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHHh--hhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQIA--QRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISIA--~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++|++.. ..+..+.+|.|||++|+.+|+.++|++|++.| ++
T Consensus 39 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 118 (223)
T 2f8y_A 39 DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV 118 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC
Confidence 4677788888773 778888888888888888888763 46667777888888888888888888888887 43
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ .|.||||.|+.+|+.++|+||++.|++ +..|.|||+.|+..++.+++++|+.+.
T Consensus 119 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 181 (223)
T 2f8y_A 119 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181 (223)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 3 578888888888888888888888875 456788888888888888888888775
No 17
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.91 E-value=3.1e-24 Score=182.46 Aligned_cols=126 Identities=21% Similarity=0.204 Sum_probs=110.4
Q ss_pred HHHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH--hhhhcccCCcchhhHHhhhcCccceehhhhccC--
Q 006847 323 QGLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI--AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-- 392 (629)
Q Consensus 323 qgLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI--A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-- 392 (629)
..++++|++.|+|. |+|||++|+.+|+.|+|++|++. +..+..|.+|.|||++|+++|+.++|++|++.|
T Consensus 52 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 131 (201)
T 3hra_A 52 IEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRE 131 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 35788999999984 88999999999999999999965 457788899999999999999999999999998
Q ss_pred Ccc----ccchHHHHHHHhCC-----chHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 393 NAV----AFLGPLMRAAERGC-----MQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 393 d~e----~G~TPLI~ASenGh-----LEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
+++ .|.||||.|+..|. .++|++|++.|++ +..|.|||+.|+..++.+++++|+.+
T Consensus 132 ~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 132 DIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred CcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 332 78999999998886 9999999999996 56789999999999999999999875
No 18
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.90 E-value=8.2e-25 Score=196.67 Aligned_cols=126 Identities=17% Similarity=0.155 Sum_probs=112.4
Q ss_pred HHHHHHHhcCCC-----------------CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccC--------------Ccch
Q 006847 324 GLLGLLVEGGAD-----------------NVNQCFLEASRFGSTELVRILLQI-AQRNSLDV--------------DVDL 371 (629)
Q Consensus 324 gLlKsLIEgGaD-----------------~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~--------------DgdT 371 (629)
.++++|++.|+| .|+|||++|+++|+.|+|++||+. |+.+..+. +|.|
T Consensus 71 ~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~t 150 (273)
T 2pnn_A 71 DTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGEL 150 (273)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBS
T ss_pred HHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCC
Confidence 456777777653 499999999999999999999999 56777776 7999
Q ss_pred hhHHhhhcCccceehhhhc---cC-Ccc----ccchHHHHHHHhCC---------chHHHHHHHhCcc-----------c
Q 006847 372 ALGFASHYCKIGTMECLVE---EG-NAV----AFLGPLMRAAERGC---------MQVVQWFVKRGCR-----------D 423 (629)
Q Consensus 372 pLi~AS~nGhLEVVKYLIS---~G-d~e----~G~TPLI~ASenGh---------LEVVKYLIS~GAd-----------d 423 (629)
||++|+.+|+.++|++|++ .| +++ .|.||||+|++.|+ .++|++|++.|++ +
T Consensus 151 pL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d 230 (273)
T 2pnn_A 151 PLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITN 230 (273)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccC
Confidence 9999999999999999999 78 544 89999999999998 8999999999985 4
Q ss_pred cccCchhhHhhhcChHHHHHhhhcCC
Q 006847 424 MDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 424 ~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
..|.|||+.|+..++.+++++|+.+-
T Consensus 231 ~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 231 RKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 57999999999999999999999865
No 19
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.90 E-value=4.5e-24 Score=197.01 Aligned_cols=155 Identities=23% Similarity=0.214 Sum_probs=124.7
Q ss_pred HHHHHHHHhcCCCC----cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-
Q 006847 323 QGLLGLLVEGGADN----VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV- 395 (629)
Q Consensus 323 qgLlKsLIEgGaD~----gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e- 395 (629)
..+.++|++++.+. |+|||++|+++|+.|+|++||+. ++.+.. ||.|||++|+.+|+.++|++|++.| +++
T Consensus 13 ~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 90 (285)
T 3kea_A 13 KQLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQ 90 (285)
T ss_dssp HHHHHHHHSTTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHhCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 45566777777764 89999999999999999999998 455555 5899999999999999999999999 544
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCcc----cccc-CchhhHhhhcChHHHHHhhhcCCChhhhh-HhHHHHHHHhc
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDL-CLALTAATSSSQVEVAAYLLPHVPQHVLA-ALSIEILKAAG 466 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g-~taL~tA~s~gq~eVVkYLLS~vPq~vl~-alsieilkAA~ 466 (629)
.|.||||+|+++|++++|+||++.|++ +..| .|||+.|+..++.++++||+.+.|..... ...+-+-.|+.
T Consensus 91 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~ 170 (285)
T 3kea_A 91 FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIK 170 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHH
Confidence 689999999999999999999999996 4456 79999999999999999999998766543 33333334554
Q ss_pred ccCCCCccceeehhhc
Q 006847 467 ERSGGSLDGVAFLLHS 482 (629)
Q Consensus 467 ~rs~gs~~GV~flL~S 482 (629)
.|.++-|.+||..
T Consensus 171 ---~g~~~~v~~Ll~~ 183 (285)
T 3kea_A 171 ---NGHVDMMILLLDY 183 (285)
T ss_dssp ---TTCHHHHHHHHHH
T ss_pred ---cChHHHHHHHHHc
Confidence 5677777777754
No 20
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=3.6e-24 Score=176.62 Aligned_cols=124 Identities=21% Similarity=0.172 Sum_probs=107.4
Q ss_pred HHHHHHHhc-CCC------CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEG-GAD------NVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEg-GaD------~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
..+++|++. +.| .|+|||++ +.+|+.|+|++|++. ++.+.+|.+|.|||++|+.+|+.++|++|++.| ++
T Consensus 16 ~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 94 (156)
T 1bd8_A 16 QEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV 94 (156)
T ss_dssp HHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 355667765 224 28999999 999999999999998 568889999999999999999999999999999 44
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ .|.||||.|+++|+.++|+||++. ++ +..|.|||+.|+..++.+++++|++++
T Consensus 95 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 156 (156)
T 1bd8_A 95 NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156 (156)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTTC
T ss_pred CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhhC
Confidence 4 799999999999999999999998 75 567999999999999999999999864
No 21
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.8e-24 Score=177.64 Aligned_cols=112 Identities=25% Similarity=0.259 Sum_probs=105.3
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCc
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCM 410 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhL 410 (629)
+.|||++|+.+|++|+|++||+. ++.+..|.+|.|||++|+.+|+.++|++|++.| +++ .|.||||.|+++|+.
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 93 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHL 93 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 78999999999999999999998 568889999999999999999999999999999 544 799999999999999
Q ss_pred hHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 411 QVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 411 EVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
++|++|++.|++ +..|.|||+.|+..++.+++++|+..
T Consensus 94 ~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 94 EIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 999999999996 56799999999999999999999874
No 22
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.4e-24 Score=169.02 Aligned_cols=114 Identities=27% Similarity=0.321 Sum_probs=105.8
Q ss_pred CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCC
Q 006847 336 NVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGC 409 (629)
Q Consensus 336 ~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGh 409 (629)
+|.|||+.|+++|+.|+|++|++. ++.+..+.+|.|||++|+.+|+.+++++|++.| +++ .|.||||.|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 388999999999999999999998 557889999999999999999999999999999 443 79999999999999
Q ss_pred chHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 410 MQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 410 LEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.++|+||++.|++ +..|.|||+.|+..++.++++||+++.
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 9999999999997 567999999999999999999998753
No 23
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.90 E-value=2.5e-24 Score=189.98 Aligned_cols=126 Identities=17% Similarity=0.062 Sum_probs=110.9
Q ss_pred HHHHHHHhcCCC---C------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-
Q 006847 324 GLLGLLVEGGAD---N------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG- 392 (629)
Q Consensus 324 gLlKsLIEgGaD---~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G- 392 (629)
.++++|++.|++ . |.|||++|+.+|+.|+|++||+. |+.+..|.+|.|||++|+.+|+.++|++|++.|
T Consensus 23 ~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 102 (282)
T 1oy3_D 23 PFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP 102 (282)
T ss_dssp HHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCC
T ss_pred HHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCC
Confidence 467888888876 1 88999999999999999999998 568889999999999999999999999999977
Q ss_pred C-----------------------------------------------c----cccchHHHHHHHhCCchHHHHHHHhCc
Q 006847 393 N-----------------------------------------------A----VAFLGPLMRAAERGCMQVVQWFVKRGC 421 (629)
Q Consensus 393 d-----------------------------------------------~----e~G~TPLI~ASenGhLEVVKYLIS~GA 421 (629)
+ . ..|.||||+|+.+|+.++|++|++.|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 182 (282)
T 1oy3_D 103 SHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182 (282)
T ss_dssp SSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 2 1 168999999999999999999999999
Q ss_pred c----c-cccCchhhHhhhcChHHHHHhhhcCC
Q 006847 422 R----D-MDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 422 d----d-~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ + ..|.||||.|+..++.+++++|+.+.
T Consensus 183 ~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 215 (282)
T 1oy3_D 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG 215 (282)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 6 2 24999999999999999999999875
No 24
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=3e-24 Score=183.74 Aligned_cols=131 Identities=19% Similarity=0.220 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHhcCCCCcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc--
Q 006847 320 TVIQGLLGLLVEGGADNVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV-- 395 (629)
Q Consensus 320 ~~iqgLlKsLIEgGaD~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e-- 395 (629)
..|+..+..+++.--+.|+|||++|+.+|+.|+|++|++. ++.+..|.+|.|||++|+.+|+.++|++|++.| +++
T Consensus 18 ~~i~~~~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 97 (192)
T 2rfm_A 18 KSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTK 97 (192)
T ss_dssp HHHHHTHHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC
T ss_pred hhhhhhhHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 4467777888887777799999999999999999999998 558889999999999999999999999999999 544
Q ss_pred --ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 396 --AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 396 --~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
.|.||||.|+.+|+.++|+||++.|++ +..|.||||.|+..++.++++||+.+-.
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 158 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGA 158 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 799999999999999999999999996 5679999999999999999999998753
No 25
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.90 E-value=2.7e-24 Score=187.26 Aligned_cols=129 Identities=14% Similarity=0.040 Sum_probs=114.9
Q ss_pred HHHHHHHhcCCC-----------CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccC-------------CcchhhHHhhh
Q 006847 324 GLLGLLVEGGAD-----------NVNQCFLEASRFGSTELVRILLQI-AQRNSLDV-------------DVDLALGFASH 378 (629)
Q Consensus 324 gLlKsLIEgGaD-----------~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~-------------DgdTpLi~AS~ 378 (629)
.++++|++.|+| .|+|||++|+.+|+.|+|++||+. ++.+..+. +|.|||++|+.
T Consensus 51 ~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 130 (232)
T 2rfa_A 51 EAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAAC 130 (232)
T ss_dssp HHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHH
T ss_pred HHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHH
Confidence 577889999987 389999999999999999999998 44555544 79999999999
Q ss_pred cCccceehhhhccC-Ccc----ccchHHHHHHHhCCchHH----HHHHHhCcc----------ccccCchhhHhhhcChH
Q 006847 379 YCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVV----QWFVKRGCR----------DMDLCLALTAATSSSQV 439 (629)
Q Consensus 379 nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVV----KYLIS~GAd----------d~~g~taL~tA~s~gq~ 439 (629)
+|+.++|++|++.| |++ .|.||||+|+.+|+.++| ++|++.|++ +..|.|||+.|+..|+.
T Consensus 131 ~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 131 VGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCH
Confidence 99999999999999 554 799999999999999998 999999985 45799999999999999
Q ss_pred HHHHhhhcCCChh
Q 006847 440 EVAAYLLPHVPQH 452 (629)
Q Consensus 440 eVVkYLLS~vPq~ 452 (629)
++++||+++.+..
T Consensus 211 ~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 211 VMFQHLMQKRKHI 223 (232)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHhcCccc
Confidence 9999999886443
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.90 E-value=3.8e-24 Score=192.93 Aligned_cols=127 Identities=24% Similarity=0.184 Sum_probs=114.9
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
..+++|++.|+|. |+|||++|+.+|+.|+|++||+. ++.+..|.+|.|||++|+.+|+.++|++|++.| +.+
T Consensus 17 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 96 (261)
T 2xai_A 17 LSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ 96 (261)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 5678899999984 89999999999999999999998 568889999999999999999999999999999 433
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
.|.||||.|+++|+.++|++|++.|++ +..|.|||+.|+..++.+++++|+.+.+
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 158 (261)
T 2xai_A 97 PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA 158 (261)
T ss_dssp CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 799999999999999999999999996 5678899999999999999999998753
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.90 E-value=5.4e-24 Score=184.60 Aligned_cols=126 Identities=22% Similarity=0.228 Sum_probs=92.0
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++|++. ++.+..|.+|.|||++|+.+|+.+++++|++.| +++
T Consensus 54 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 133 (231)
T 3aji_A 54 EIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD 133 (231)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4566777777763 67777777777777777777776 446667777777777777777777777777777 333
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.|.|||+.|+++|++++|++|++.|++ +..|.|||+.|+..++.++++||+.+.
T Consensus 134 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 195 (231)
T 3aji_A 134 AKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQG 195 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCC
Confidence 577777777777777777777777775 456777777777777777777777654
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.90 E-value=4.1e-24 Score=191.36 Aligned_cols=129 Identities=20% Similarity=0.223 Sum_probs=111.7
Q ss_pred HHHHHHHhcCC-C------CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGA-D------NVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGa-D------~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|+ | .|.|||++|+++|+.|+|++||+. ++.+..|.+|+|||++|+.+|+.++|++|++.| ++
T Consensus 104 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 183 (253)
T 1yyh_A 104 GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK 183 (253)
T ss_dssp HHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 57788999887 3 289999999999999999999998 568889999999999999999999999999999 54
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCChh
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQH 452 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq~ 452 (629)
+ .|.|||+.|+++|+.++|++|++.|++ +..|.|||+.|...|+.||++||...-|.+
T Consensus 184 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~ 249 (253)
T 1yyh_A 184 DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249 (253)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-----
T ss_pred CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Confidence 4 799999999999999999999999996 567999999999999999999999887554
No 29
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=5.7e-24 Score=180.80 Aligned_cols=127 Identities=17% Similarity=0.052 Sum_probs=114.5
Q ss_pred HHHHHHHhc-CCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEG-GADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEg-GaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++. +.|. |+|||++|+.+|+.|+|++||+. ++.+..|.+|.|||++|+.+|+.++|++|++.| ++
T Consensus 19 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 98 (179)
T 3f6q_A 19 VAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI 98 (179)
T ss_dssp HHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456777775 5542 89999999999999999999999 568889999999999999999999999999999 54
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
+ .|.||||.|+.+|+.++|++|++.|++ +..|.|||+.|...++.+++++|+.+..
T Consensus 99 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 99 NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 4 799999999999999999999999997 5679999999999999999999998763
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.90 E-value=8.2e-24 Score=182.55 Aligned_cols=126 Identities=20% Similarity=0.209 Sum_probs=115.9
Q ss_pred HHHHHHHhcCC-C------CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGA-D------NVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGa-D------~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|+ + .|.|||++|+.+|+.|+|++|++. ++.+..|.+|+|||++|+.+|+.++|++|++.| ++
T Consensus 72 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 151 (223)
T 2f8y_A 72 GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK 151 (223)
T ss_dssp HHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 57889999887 3 289999999999999999999998 568889999999999999999999999999999 54
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ .|.|||+.|+++|+.++|++|++.|++ +..|.|||+.|+..++.++++||+.+-
T Consensus 152 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 152 DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 4 799999999999999999999999997 567999999999999999999999864
No 31
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.90 E-value=1.2e-24 Score=193.35 Aligned_cols=130 Identities=15% Similarity=0.069 Sum_probs=115.2
Q ss_pred HHHHHHHhcCCC-----------------CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCC-------------cchh
Q 006847 324 GLLGLLVEGGAD-----------------NVNQCFLEASRFGSTELVRILLQI-AQRNSLDVD-------------VDLA 372 (629)
Q Consensus 324 gLlKsLIEgGaD-----------------~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~D-------------gdTp 372 (629)
.++++|++.|+| .|+|||++|+.+|+.|+|++||+. |+.+..+.+ |.||
T Consensus 60 ~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tp 139 (256)
T 2etb_A 60 ACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELP 139 (256)
T ss_dssp TTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSH
T ss_pred HHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCH
Confidence 457788887764 289999999999999999999999 567888776 9999
Q ss_pred hHHhhhcCccceehhhhc---cC-Ccc----ccchHHHHHHH--hCCch-------HHHHHHHhCccc-----------c
Q 006847 373 LGFASHYCKIGTMECLVE---EG-NAV----AFLGPLMRAAE--RGCMQ-------VVQWFVKRGCRD-----------M 424 (629)
Q Consensus 373 Li~AS~nGhLEVVKYLIS---~G-d~e----~G~TPLI~ASe--nGhLE-------VVKYLIS~GAdd-----------~ 424 (629)
||+|+.+|+.++|++|++ .| |++ .|+||||+|+. +|+.+ +|++|++.|++- .
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~ 219 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNH 219 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCC
Confidence 999999999999999999 88 544 89999999999 78898 999999999864 4
Q ss_pred ccCchhhHhhhcChHHHHHhhhcCCChhh
Q 006847 425 DLCLALTAATSSSQVEVAAYLLPHVPQHV 453 (629)
Q Consensus 425 ~g~taL~tA~s~gq~eVVkYLLS~vPq~v 453 (629)
.|.|||+.|+..|+.+++++|+++.+.+.
T Consensus 220 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 220 QGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 69999999999999999999999876554
No 32
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.90 E-value=1.3e-24 Score=192.91 Aligned_cols=129 Identities=23% Similarity=0.231 Sum_probs=113.1
Q ss_pred HHHHHHHHHHhcCCCC----------cchhHHHHh---hcCCHHHHHHHHHHhhh------------hcccCCcchhhHH
Q 006847 321 VIQGLLGLLVEGGADN----------VNQCFLEAS---RFGSTELVRILLQIAQR------------NSLDVDVDLALGF 375 (629)
Q Consensus 321 ~iqgLlKsLIEgGaD~----------gnTPLL~AS---~~GhLEVVKyLISIA~k------------nak~~DgdTpLi~ 375 (629)
.++.|+++|++.|++. |.||||+|+ ++|+.|+|++||+.+.. +..|.+|.||||+
T Consensus 20 ~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~ 99 (260)
T 3jxi_A 20 GLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHI 99 (260)
T ss_dssp GGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHH
T ss_pred HHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHH
Confidence 4677999999999873 889999999 88999999999998432 2345589999999
Q ss_pred hhhcCccceehhhhccC-Ccc------------------ccchHHHHHHHhCCchHHHHHHH---hCcc----ccccCch
Q 006847 376 ASHYCKIGTMECLVEEG-NAV------------------AFLGPLMRAAERGCMQVVQWFVK---RGCR----DMDLCLA 429 (629)
Q Consensus 376 AS~nGhLEVVKYLIS~G-d~e------------------~G~TPLI~ASenGhLEVVKYLIS---~GAd----d~~g~ta 429 (629)
|+.+|++++|++|++.| +++ .|.||||+|+.+|+.++|++|++ .|++ +..|.||
T Consensus 100 A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~Tp 179 (260)
T 3jxi_A 100 AIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTV 179 (260)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCH
T ss_pred HHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcH
Confidence 99999999999999999 433 39999999999999999999999 8886 6689999
Q ss_pred hhHhhhcCh---------HHHHHhhhcCC
Q 006847 430 LTAATSSSQ---------VEVAAYLLPHV 449 (629)
Q Consensus 430 L~tA~s~gq---------~eVVkYLLS~v 449 (629)
||.|+..++ .+++++|+.+.
T Consensus 180 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~g 208 (260)
T 3jxi_A 180 LHALVAIADNTRENTKFVTKMYDLLLIKC 208 (260)
T ss_dssp HHHHHHHCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCchhHHHHHHHHHHHHHHhC
Confidence 999998887 69999998874
No 33
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.90 E-value=3.2e-24 Score=190.52 Aligned_cols=129 Identities=23% Similarity=0.160 Sum_probs=113.4
Q ss_pred HHHHHHHHHHhcCCC----------CcchhHHHHhhc---CCHHHHHHHHHHhh-hhc-----------ccCCcchhhHH
Q 006847 321 VIQGLLGLLVEGGAD----------NVNQCFLEASRF---GSTELVRILLQIAQ-RNS-----------LDVDVDLALGF 375 (629)
Q Consensus 321 ~iqgLlKsLIEgGaD----------~gnTPLL~AS~~---GhLEVVKyLISIA~-kna-----------k~~DgdTpLi~ 375 (629)
.++.|+++|++.|+| .|+|||++|+.+ |+.|+|++||+... .+. .|.+|.||||+
T Consensus 17 ~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~ 96 (256)
T 2etb_A 17 ELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHI 96 (256)
T ss_dssp GGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHH
T ss_pred HHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHH
Confidence 356789999999986 288999999999 99999999999843 442 33679999999
Q ss_pred hhhcCccceehhhhccC-Ccc----c-------------cchHHHHHHHhCCchHHHHHHH---hCcc----ccccCchh
Q 006847 376 ASHYCKIGTMECLVEEG-NAV----A-------------FLGPLMRAAERGCMQVVQWFVK---RGCR----DMDLCLAL 430 (629)
Q Consensus 376 AS~nGhLEVVKYLIS~G-d~e----~-------------G~TPLI~ASenGhLEVVKYLIS---~GAd----d~~g~taL 430 (629)
|+.+|++++|++|++.| +++ . |.||||+|+++|+.++|++|++ .|++ +..|.|||
T Consensus 97 A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpL 176 (256)
T 2etb_A 97 AIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVL 176 (256)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHH
Confidence 99999999999999999 544 2 9999999999999999999999 8996 66899999
Q ss_pred hHhhh--cChHH-------HHHhhhcCC
Q 006847 431 TAATS--SSQVE-------VAAYLLPHV 449 (629)
Q Consensus 431 ~tA~s--~gq~e-------VVkYLLS~v 449 (629)
|.|+. .++.+ ++++|+.+.
T Consensus 177 h~A~~~~~~~~~~~~~~~~iv~~Ll~~g 204 (256)
T 2etb_A 177 HALVMIADNSPENSALVIHMYDGLLQMG 204 (256)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcccCCchhhHHHHHHHHHHHHcC
Confidence 99999 88888 999998764
No 34
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=8.7e-24 Score=184.86 Aligned_cols=126 Identities=22% Similarity=0.267 Sum_probs=113.9
Q ss_pred HHHHHHHhcCCCC-------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN-------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~-------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|+|. |.|||++|+++|+.|+|++||+. ++.+..|.+|.|||++|+.+|+.++|++|++.| ++
T Consensus 19 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 98 (285)
T 1wdy_A 19 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5788999999873 78999999999999999999998 557889999999999999999999999999999 44
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc--------------ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR--------------DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd--------------d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ .|.|||+.|+.+|+.++|+||++.|++ +..|.|||+.|+..++.++++||+...
T Consensus 99 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 171 (285)
T 1wdy_A 99 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM 171 (285)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS
T ss_pred CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc
Confidence 4 799999999999999999999999996 445889999999999999999999763
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.90 E-value=7.1e-24 Score=195.67 Aligned_cols=129 Identities=12% Similarity=0.129 Sum_probs=109.9
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCc-chhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDV-DLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~Dg-dTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++||+. ++.+..+.+| .|||++|+.+|+.++|++|++.| +.
T Consensus 76 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 76 KIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 4678888889884 88999999999999999999998 6688888888 79999999999999999999999 22
Q ss_pred ---cccchHHHHHHHhCCchHHHHHHHhCcc----ccccCch-hhHhhhcChHHHHHhhhcCCChh
Q 006847 395 ---VAFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLA-LTAATSSSQVEVAAYLLPHVPQH 452 (629)
Q Consensus 395 ---e~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~ta-L~tA~s~gq~eVVkYLLS~vPq~ 452 (629)
..|.||||.|+++|+.++|+||++.|++ +..|.|| |+.|+..++.+++++|+.+...+
T Consensus 156 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~ 221 (285)
T 3kea_A 156 FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINI 221 (285)
T ss_dssp CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCS
T ss_pred ccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 2788999999999999999999999986 4568887 99999999999999999887443
No 36
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.90 E-value=9.3e-24 Score=189.06 Aligned_cols=126 Identities=20% Similarity=0.140 Sum_probs=106.3
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHHh--hhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQIA--QRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISIA--~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++|++.. ..+..+.+|.|||++|+.+|+.++|++|++.| ++
T Consensus 71 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (253)
T 1yyh_A 71 DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV 150 (253)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence 4677888888884 788999999999999999998873 46778888889999999999999999999888 44
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ .|.||||+|+++|+.++|++|++.|++ +..|.|||+.|+..++.+++++|+.+.
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 213 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 3 688999999999999999999999886 556889999999999999999988875
No 37
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=1.3e-24 Score=194.80 Aligned_cols=126 Identities=18% Similarity=0.103 Sum_probs=103.6
Q ss_pred HHHHHHHhcCCCC-----cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-
Q 006847 324 GLLGLLVEGGADN-----VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV- 395 (629)
Q Consensus 324 gLlKsLIEgGaD~-----gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e- 395 (629)
..++.||+.|+|. +.|||+.|+.+|++|+|++||+. ++.+..|.+|.||||+|+.+||.++|++|++.| |++
T Consensus 19 ~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 98 (239)
T 1ycs_B 19 KTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 98 (239)
T ss_dssp ------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 4567999999995 78999999999999999999988 568889999999999999999999999999999 554
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCcc----ccccC-chhhHh--hhcChHHHHHhhhcCC
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLC-LALTAA--TSSSQVEVAAYLLPHV 449 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~-taL~tA--~s~gq~eVVkYLLS~v 449 (629)
.|+||||.|+.+|+.++|++|++.|++ +..+. |||+.| +..|+.++++||+.+.
T Consensus 99 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~ 162 (239)
T 1ycs_B 99 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ 162 (239)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhh
Confidence 799999999999999999999999997 33444 999999 8889999999999864
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.90 E-value=1.3e-23 Score=182.02 Aligned_cols=126 Identities=24% Similarity=0.230 Sum_probs=109.1
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHHh-----hhhcccCCcchhhHHhhhcCccceehhhhccC
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQIA-----QRNSLDVDVDLALGFASHYCKIGTMECLVEEG 392 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISIA-----~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G 392 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++|++.. ..+..|.+|.|||++|+.+|+.+++++|++.|
T Consensus 60 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 139 (241)
T 1k1a_A 60 SVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG 139 (241)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 4678888989883 889999999999999999999884 56778888999999999999999999999998
Q ss_pred -Ccc-----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 393 -NAV-----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 393 -d~e-----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+.+ .|.||||.|+++|+.++|++|++.|++ +..|.||||.|+..++.+++++|+.+.
T Consensus 140 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 206 (241)
T 1k1a_A 140 ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG 206 (241)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 332 589999999999999999999999996 557899999999999999999998864
No 39
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=5.2e-24 Score=178.55 Aligned_cols=115 Identities=23% Similarity=0.218 Sum_probs=105.4
Q ss_pred CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccch-HHHHHHHhC
Q 006847 336 NVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLG-PLMRAAERG 408 (629)
Q Consensus 336 ~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~T-PLI~ASenG 408 (629)
.|.|||++|+++|++|+|++||+. ++.+..|.+|.|||++|. +|++++|++|++.| +++ .|.| |||+|+++|
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCC
Confidence 489999999999999999999998 568889999999999996 99999999999999 544 6888 999999999
Q ss_pred CchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCCh
Q 006847 409 CMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQ 451 (629)
Q Consensus 409 hLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq 451 (629)
+.++|++|++.|++ +..|.|||+.|+..++.++++||+.+...
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~ 136 (156)
T 1bi7_B 90 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG 136 (156)
T ss_dssp CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC
Confidence 99999999999997 56799999999999999999999998643
No 40
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.89 E-value=1.4e-23 Score=189.38 Aligned_cols=126 Identities=22% Similarity=0.250 Sum_probs=94.0
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc-
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA- 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~- 394 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++||+. ++.+..|.+|.|||++|+.+|+.++|++|++.| ++
T Consensus 72 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (351)
T 3utm_A 72 RIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT 151 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 4667777777773 77888888888888888888877 457777777888888888888888888888777 32
Q ss_pred ---------------------------------------------------------cccchHHHHHHHhC---CchHHH
Q 006847 395 ---------------------------------------------------------VAFLGPLMRAAERG---CMQVVQ 414 (629)
Q Consensus 395 ---------------------------------------------------------e~G~TPLI~ASenG---hLEVVK 414 (629)
..|.|||+.|+..+ ..++|+
T Consensus 152 ~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~ 231 (351)
T 3utm_A 152 LVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAE 231 (351)
T ss_dssp CCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHH
T ss_pred cccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHH
Confidence 13567777777773 467788
Q ss_pred HHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 415 WFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 415 YLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+|++.|++ +..|.||||.|+..++.+++++|+.+.
T Consensus 232 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 270 (351)
T 3utm_A 232 LLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG 270 (351)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 88887775 456777888888888888888877764
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=6.8e-24 Score=186.69 Aligned_cols=112 Identities=26% Similarity=0.321 Sum_probs=105.6
Q ss_pred hhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCchH
Q 006847 339 QCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQV 412 (629)
Q Consensus 339 TPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEV 412 (629)
++|+.|+++|++|+||+||+. |+.|.+|.+|+|||++|+.+|+.+++++|++.| |++ .|+||||+|+++|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 589999999999999999999 679999999999999999999999999999999 554 79999999999999999
Q ss_pred HHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 413 VQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 413 VKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
|++|++.|++ +..|.|||+.|+..|+.++|++|+.+-.
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999996 6689999999999999999999998753
No 42
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=7.1e-24 Score=192.10 Aligned_cols=124 Identities=18% Similarity=0.131 Sum_probs=107.0
Q ss_pred HHHHHhcCCCC---------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 326 LGLLVEGGADN---------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 326 lKsLIEgGaD~---------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
++.|++.|+|. +.|||++|+.+|++|+|++||+. ++.+..|.+|.|||++|+.+|++++|++|++.| |+
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 46788888883 77999999999999999999998 568899999999999999999999999999999 55
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----c-cccCchhhHh--hhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----D-MDLCLALTAA--TSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d-~~g~taL~tA--~s~gq~eVVkYLLS~v 449 (629)
+ .|+||||+|+.+|+.++|++|++.|++ + ..|.|||+.| +..++.++++||+.+.
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g 146 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE 146 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC
Confidence 4 799999999999999999999999997 3 4799999999 9999999999999864
No 43
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.89 E-value=9e-24 Score=183.21 Aligned_cols=126 Identities=15% Similarity=0.074 Sum_probs=116.7
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++|++. ++.+..+.+|.|||++|+.+|++++|++|++.| +++
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 166 (231)
T 3aji_A 87 EIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Confidence 5788999999984 89999999999999999999998 558889999999999999999999999999999 544
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.|.|||+.|+++|++++|+||++.|++ +..|.|||+.|...++.++++||+.+-
T Consensus 167 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 167 IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 799999999999999999999999997 567999999999999999999998653
No 44
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=9.9e-24 Score=201.00 Aligned_cols=124 Identities=27% Similarity=0.285 Sum_probs=64.5
Q ss_pred HHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-
Q 006847 325 LLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV- 395 (629)
Q Consensus 325 LlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e- 395 (629)
++++|++.|+|. |.|||++|+++|++|+|++|++. ++.+.++.+|.|||++|+.+||.++|++|++.| +++
T Consensus 29 ~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 108 (437)
T 1n11_A 29 IVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL 108 (437)
T ss_dssp HHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCC
Confidence 444555555542 44555555555555555555554 334445555555555555555555555555555 222
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
.|.||||.|+++|++++|++|++.|++ +..|.|||+.|+..|+.++++||+.+
T Consensus 109 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 168 (437)
T 1n11_A 109 ATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 168 (437)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 455555555555555555555555553 23455555555555555555555544
No 45
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=195.25 Aligned_cols=126 Identities=21% Similarity=0.210 Sum_probs=109.9
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |.|||+.|+..|+.|++++||+. ++.+.+|.+|.|||++|+++|+.++|++|++.| |++
T Consensus 100 ~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn 179 (269)
T 4b93_B 100 DLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASIN 179 (269)
T ss_dssp THHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT
T ss_pred HHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 3678999999984 99999999999999999999998 668999999999999999999999999999999 655
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcCh-HHHHHhhhcCC
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQ-VEVAAYLLPHV 449 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq-~eVVkYLLS~v 449 (629)
.|.||||+|+++|++++|++|++.||+ +..|.|||++|..+++ .++.++|.+.+
T Consensus 180 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~ 242 (269)
T 4b93_B 180 ASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCV 242 (269)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC-----
T ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhc
Confidence 799999999999999999999999997 6789999999998886 34444444433
No 46
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.89 E-value=1.8e-23 Score=180.33 Aligned_cols=110 Identities=22% Similarity=0.191 Sum_probs=58.2
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH---hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhC
Q 006847 337 VNQCFLEASRFGSTELVRILLQI---AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERG 408 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI---A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenG 408 (629)
|+|||++|+.+|+.|+|++|++. ++.+..+.+|.|||++|+.+|+.+++++|++.| +++ .|.||||.|+++|
T Consensus 72 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 151 (228)
T 2dzn_A 72 GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG 151 (228)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 44555555555555555555554 334445555555555555555555555555555 222 4555555555555
Q ss_pred CchHHHHHHHhC-cc----ccccCchhhHhhhcChHHHHHhhh
Q 006847 409 CMQVVQWFVKRG-CR----DMDLCLALTAATSSSQVEVAAYLL 446 (629)
Q Consensus 409 hLEVVKYLIS~G-Ad----d~~g~taL~tA~s~gq~eVVkYLL 446 (629)
+.++|++|++.| ++ +..|.|||+.|+..++.++++||+
T Consensus 152 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 152 SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp CHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 555555555555 32 334555555555555555555555
No 47
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.89 E-value=2e-23 Score=192.20 Aligned_cols=127 Identities=24% Similarity=0.184 Sum_probs=114.8
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++|++. ++.+..|.+|.|||++|+.+|+.++|++|++.| +.+
T Consensus 73 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 152 (285)
T 3d9h_A 73 LSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ 152 (285)
T ss_dssp HHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC
Confidence 5788999999984 89999999999999999999998 568889999999999999999999999999999 433
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
.|.|||+.|+++|+.++|++|++.|++ +..|.|||+.|+..++.+++++|+....
T Consensus 153 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 214 (285)
T 3d9h_A 153 PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA 214 (285)
T ss_dssp CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCC
Confidence 799999999999999999999999996 5678999999999999999999998753
No 48
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=1.7e-23 Score=174.90 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=106.0
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCc
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCM 410 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhL 410 (629)
|+|||+.|+++|++|+|++|++. +..+..|.+|+|||++|+.+|++++|++|++.| +++ .|.||||.|+.+|+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 78999999999999999999998 558889999999999999999999999999999 544 789999999999999
Q ss_pred hHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 411 QVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 411 EVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
++|+||++.|++ +..|.|||+.|+..++.++++||+.+..
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 126 (167)
T 3v31_A 83 DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 126 (167)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999996 5679999999999999999999997653
No 49
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.89 E-value=2.3e-23 Score=181.34 Aligned_cols=127 Identities=22% Similarity=0.290 Sum_probs=107.2
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC--Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG--NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G--d~ 394 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++|++. +..+..+.+|.|||++|+.+|+.+++++|++.| +.
T Consensus 25 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 104 (237)
T 3b7b_A 25 DICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDV 104 (237)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCT
T ss_pred HHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc
Confidence 4678888888874 78899999999999999999987 447778888899999999999999999999888 22
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
+ .|.|||+.|+++|+.++|+||++.|++ +..|.|||+.|+..++.++++||+.+.+
T Consensus 105 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 168 (237)
T 3b7b_A 105 NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKC 168 (237)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 2 688999999999999999999999886 5578899999999999999999987643
No 50
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=7e-24 Score=173.22 Aligned_cols=114 Identities=18% Similarity=0.084 Sum_probs=103.0
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCc
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCM 410 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhL 410 (629)
|+|||++|+.+|++|+|++||+. ++.+.+|.+|.||||+|+.+|+.++|++|++.| +.+ .|.||||+|+++|+.
T Consensus 10 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 89 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHV 89 (137)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCH
Confidence 99999999999999999999998 568889999999999999999999999999999 444 799999999999999
Q ss_pred hHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 411 QVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 411 EVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
++|++|++.|++ +..|.|||+.|...+..+++++|...-+
T Consensus 90 ~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 90 DIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999997 6689999999999999999999876543
No 51
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.89 E-value=2.3e-23 Score=187.88 Aligned_cols=126 Identities=21% Similarity=0.217 Sum_probs=106.9
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHHhhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV- 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISIA~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e- 395 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++|++....-..+.+|.|||++|+.+|+.++|++|++.| +++
T Consensus 50 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 129 (261)
T 2xai_A 50 SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDH 129 (261)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 4678888889884 88999999999999999999988543335667889999999999999999999998 444
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCcc---ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCR---DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAd---d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.|.||||.|+++|+.++|++|++.|++ +..|.||||.|+..++.+++++|+.+.
T Consensus 130 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g 189 (261)
T 2xai_A 130 KISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFG 189 (261)
T ss_dssp CBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcC
Confidence 788999999999999999999999986 557889999999999999999998764
No 52
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.89 E-value=2.8e-23 Score=180.77 Aligned_cols=127 Identities=20% Similarity=0.249 Sum_probs=113.1
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH--hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI--AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI--A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++|++. +..+..+.+|.|||++|+.+|+.+++++|++.| ++
T Consensus 58 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 137 (237)
T 3b7b_A 58 EAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI 137 (237)
T ss_dssp HHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 5778999999884 88999999999999999999998 457778889999999999999999999999999 44
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
+ .|.|||+.|+++|+.++|+||++.|++ +..|.|||+.|+..++.++++||+.+..
T Consensus 138 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 201 (237)
T 3b7b_A 138 NIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDS 201 (237)
T ss_dssp TCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred CccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCC
Confidence 3 799999999999999999999999996 4568999999999999999999998764
No 53
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.89 E-value=2.2e-23 Score=179.86 Aligned_cols=127 Identities=14% Similarity=0.072 Sum_probs=113.1
Q ss_pred HHHHHHHhcCCCC-------cchhHHHHhhcCCHHHHHHHHHHh---hhhc-ccCCcchhhHHhhhcCccceehhhhccC
Q 006847 324 GLLGLLVEGGADN-------VNQCFLEASRFGSTELVRILLQIA---QRNS-LDVDVDLALGFASHYCKIGTMECLVEEG 392 (629)
Q Consensus 324 gLlKsLIEgGaD~-------gnTPLL~AS~~GhLEVVKyLISIA---~kna-k~~DgdTpLi~AS~nGhLEVVKYLIS~G 392 (629)
..+++|++.|++. |.|||++|+.+|+.|+|++|++.. +.+. .+.+|.|||++|+.+|+.+++++|++.|
T Consensus 16 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 95 (228)
T 2dzn_A 16 FKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRP 95 (228)
T ss_dssp HHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSS
T ss_pred HHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 4677888878763 899999999999999999999983 3455 7889999999999999999999999998
Q ss_pred ---Ccc----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 393 ---NAV----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 393 ---d~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
+.+ .|.|||+.|+++|+.++|+||++.|++ +..|.||||.|+..++.+++++|+.+.+
T Consensus 96 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 164 (228)
T 2dzn_A 96 LKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGK 164 (228)
T ss_dssp SCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred CCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 222 699999999999999999999999997 5679999999999999999999998873
No 54
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.89 E-value=1.6e-23 Score=195.59 Aligned_cols=126 Identities=19% Similarity=0.072 Sum_probs=72.0
Q ss_pred HHHHHHHhcCCCC----cchhHHHHhhcCCHHHHHHHHHH-----hhhhc-----------------ccCCcchhhHHhh
Q 006847 324 GLLGLLVEGGADN----VNQCFLEASRFGSTELVRILLQI-----AQRNS-----------------LDVDVDLALGFAS 377 (629)
Q Consensus 324 gLlKsLIEgGaD~----gnTPLL~AS~~GhLEVVKyLISI-----A~kna-----------------k~~DgdTpLi~AS 377 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++||+. +..+. .|.+|.|||++|+
T Consensus 67 ~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 146 (364)
T 3ljn_A 67 DTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCV 146 (364)
T ss_dssp HHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHH
T ss_pred HHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHH
Confidence 3455566656553 55666666666666666666654 11222 4455566666666
Q ss_pred hcC--ccceehhhhccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCcc---------ccccCchhhHhhhcChHHH
Q 006847 378 HYC--KIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCR---------DMDLCLALTAATSSSQVEV 441 (629)
Q Consensus 378 ~nG--hLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAd---------d~~g~taL~tA~s~gq~eV 441 (629)
.+| ++++|++|++.| +++ .|.||||+|+++|+.++|++|++.|++ +..|.||||.|+..++.++
T Consensus 147 ~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 226 (364)
T 3ljn_A 147 GLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDV 226 (364)
T ss_dssp HSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHH
T ss_pred HcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHH
Confidence 666 666666666666 332 456666666666666666666665554 2345666666666666666
Q ss_pred HHhhhcCC
Q 006847 442 AAYLLPHV 449 (629)
Q Consensus 442 VkYLLS~v 449 (629)
|++|+.+.
T Consensus 227 v~~Ll~~g 234 (364)
T 3ljn_A 227 AMRFVEMG 234 (364)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHcC
Confidence 66666543
No 55
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.89 E-value=2.4e-23 Score=194.41 Aligned_cols=116 Identities=17% Similarity=0.142 Sum_probs=108.7
Q ss_pred cchhHHHHhhcC--CHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-C-----cc----ccchHHHH
Q 006847 337 VNQCFLEASRFG--STELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-N-----AV----AFLGPLMR 403 (629)
Q Consensus 337 gnTPLL~AS~~G--hLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d-----~e----~G~TPLI~ 403 (629)
|.|||++|+.+| ++|+|++||+. |+.+..|.+|.|||++|+.+|+.++|++|++.| + .+ .|.||||+
T Consensus 138 g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~ 217 (364)
T 3ljn_A 138 GQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217 (364)
T ss_dssp CCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHH
T ss_pred CCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHH
Confidence 789999999999 99999999999 668999999999999999999999999999988 5 43 79999999
Q ss_pred HHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCChh
Q 006847 404 AAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQH 452 (629)
Q Consensus 404 ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq~ 452 (629)
|+++|++++|++|++.|++ +..|.|||+.|+..++.+++++|+.+.+..
T Consensus 218 A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 218 AILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 9999999999999999997 668999999999999999999999987654
No 56
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.88 E-value=1.1e-23 Score=189.42 Aligned_cols=129 Identities=21% Similarity=0.207 Sum_probs=112.6
Q ss_pred HHHHHHHHHHhcCCC----------CcchhHHHHhhc---CCHHHHHHHHHHhh--------hhc----ccCCcchhhHH
Q 006847 321 VIQGLLGLLVEGGAD----------NVNQCFLEASRF---GSTELVRILLQIAQ--------RNS----LDVDVDLALGF 375 (629)
Q Consensus 321 ~iqgLlKsLIEgGaD----------~gnTPLL~AS~~---GhLEVVKyLISIA~--------kna----k~~DgdTpLi~ 375 (629)
+++.|++++++.|++ .|+||||+|+.+ |+.|+|++||+... .+. .|.+|.|||++
T Consensus 28 ~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~ 107 (273)
T 2pnn_A 28 ELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHI 107 (273)
T ss_dssp TTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHH
T ss_pred HHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHH
Confidence 367788888888754 389999999987 99999999999843 233 56689999999
Q ss_pred hhhcCccceehhhhccC-Ccc------------------ccchHHHHHHHhCCchHHHHHHH---hCcc----ccccCch
Q 006847 376 ASHYCKIGTMECLVEEG-NAV------------------AFLGPLMRAAERGCMQVVQWFVK---RGCR----DMDLCLA 429 (629)
Q Consensus 376 AS~nGhLEVVKYLIS~G-d~e------------------~G~TPLI~ASenGhLEVVKYLIS---~GAd----d~~g~ta 429 (629)
|+.+|++++|++|++.| +++ .|.||||+|+.+|++++|+||++ .|++ +..|.||
T Consensus 108 A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tp 187 (273)
T 2pnn_A 108 AIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTV 187 (273)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCH
T ss_pred HHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcH
Confidence 99999999999999999 443 39999999999999999999999 8996 6689999
Q ss_pred hhHhhhcCh---------HHHHHhhhcCC
Q 006847 430 LTAATSSSQ---------VEVAAYLLPHV 449 (629)
Q Consensus 430 L~tA~s~gq---------~eVVkYLLS~v 449 (629)
||.|+..++ .+++++|+.+.
T Consensus 188 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~g 216 (273)
T 2pnn_A 188 LHALVEVADNTVDNTKFVTSMYNEILILG 216 (273)
T ss_dssp HHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCcchhHHHHHHHHHHHHHHhh
Confidence 999999998 79999999864
No 57
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.88 E-value=1.1e-22 Score=176.32 Aligned_cols=130 Identities=22% Similarity=0.242 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC
Q 006847 320 TVIQGLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG 392 (629)
Q Consensus 320 ~~iqgLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G 392 (629)
.+++-|++.+.+.|+|. |.|||++|+.+|+.|+|++|++. ++.+..+.+|.|||++|+.+|+.+++++|++.|
T Consensus 23 ~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~ 102 (241)
T 1k1a_A 23 PAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSA 102 (241)
T ss_dssp HHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 34556666666677663 77777777777777777777777 446667777777777777777777777777776
Q ss_pred C-----cc----ccchHHHHHHHhCCchHHHHHHHhCcc----c-cccCchhhHhhhcChHHHHHhhhcCC
Q 006847 393 N-----AV----AFLGPLMRAAERGCMQVVQWFVKRGCR----D-MDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 393 d-----~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d-~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
. .+ .|.|||+.|+.+|+.++|++|++.|++ + ..|.|||+.|+..++.+++++|+.+.
T Consensus 103 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 173 (241)
T 1k1a_A 103 APGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG 173 (241)
T ss_dssp CTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 2 11 577777777777777777777777775 2 45777777777777777777777653
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.88 E-value=7.2e-23 Score=174.07 Aligned_cols=126 Identities=15% Similarity=0.108 Sum_probs=108.3
Q ss_pred HHHHHHh-cCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC--Cc
Q 006847 325 LLGLLVE-GGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG--NA 394 (629)
Q Consensus 325 LlKsLIE-gGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G--d~ 394 (629)
.++.|++ +++|. |+|||++|+++|+.|+|++||+. ++.+..|.+|+|||++|+.+|+.+++++|++.+ +.
T Consensus 20 ~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 99 (201)
T 3hra_A 20 KVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDL 99 (201)
T ss_dssp HHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT
T ss_pred HHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCccc
Confidence 3445555 44352 89999999999999999999998 568889999999999999999999999999655 33
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhC-cc----ccccCchhhHhhhcCh-----HHHHHhhhcCCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRG-CR----DMDLCLALTAATSSSQ-----VEVAAYLLPHVP 450 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~G-Ad----d~~g~taL~tA~s~gq-----~eVVkYLLS~vP 450 (629)
+ .|.||||.|+++|+.++|++|++.| ++ +..|.||||.|+..+. .+++++|+.+..
T Consensus 100 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga 169 (201)
T 3hra_A 100 NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA 169 (201)
T ss_dssp TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTC
T ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCC
Confidence 3 6999999999999999999999999 54 5679999999999887 999999998753
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.88 E-value=4.4e-23 Score=171.36 Aligned_cols=114 Identities=30% Similarity=0.322 Sum_probs=104.3
Q ss_pred cchhHHHHhhcCCHHHHHHHHHHhhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCch
Q 006847 337 VNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQ 411 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISIA~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLE 411 (629)
..|||+.|+++|++|+|++|++.......+.+|.|||++|+.+|+++++++|++.| +++ .|.||||.|+.+|+.+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 46899999999999999999998654457888999999999999999999999999 544 7999999999999999
Q ss_pred HHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 412 VVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 412 VVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
+|+||++.|++ +..|.|||+.|+..++.++++||+.+-.
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 124 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA 124 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999996 5679999999999999999999998753
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=2.6e-23 Score=171.86 Aligned_cols=116 Identities=20% Similarity=0.169 Sum_probs=106.0
Q ss_pred CCcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhC
Q 006847 335 DNVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERG 408 (629)
Q Consensus 335 D~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenG 408 (629)
+...|||+.|+++|+.|+|++||+. ++.+..|.+|+|||++|+. |+.++|++|++.| +++ .|+||||.|+++|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4567999999999999999999987 5578899999999999999 9999999999999 544 7999999999999
Q ss_pred CchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCCh
Q 006847 409 CMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQ 451 (629)
Q Consensus 409 hLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq 451 (629)
+.++|++|++.|++ +..|.||||.|+..++.++++||+.+.+.
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 99999999999996 66899999999999999999999987654
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=5.4e-23 Score=173.90 Aligned_cols=114 Identities=29% Similarity=0.353 Sum_probs=106.1
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCc
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCM 410 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhL 410 (629)
+.|||++|+++|+.|+|++||+. ++.+..|.+|.|||++|+.+|++++|++|++.| +.+ .|.||||.|+.+|+.
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 67899999999999999999999 568889999999999999999999999999999 544 799999999999999
Q ss_pred hHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 411 QVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 411 EVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
++|+||++.|++ +..|.|||+.|+..++.++++||+.+-.
T Consensus 94 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 137 (169)
T 2y1l_E 94 EIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999996 5679999999999999999999998753
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=5.5e-23 Score=169.56 Aligned_cols=111 Identities=20% Similarity=0.246 Sum_probs=104.6
Q ss_pred cchhHHHHhhcCCHHHHHHHHHHh--hhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCC
Q 006847 337 VNQCFLEASRFGSTELVRILLQIA--QRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGC 409 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISIA--~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGh 409 (629)
+.|||+.|+++|+.|+|++||+.+ +.+..|.+|+|||++ +.+|+.++|++|++.| +++ .|.||||.|+++|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 579999999999999999999996 688899999999999 9999999999999999 544 79999999999999
Q ss_pred chHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 410 MQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 410 LEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
.++|++|++.|++ +..|.||||.|+..++.++++||+.+
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 9999999999996 56899999999999999999999987
No 63
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.88 E-value=9.7e-23 Score=187.62 Aligned_cols=126 Identities=21% Similarity=0.215 Sum_probs=107.6
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHHhhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV- 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISIA~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e- 395 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++|++....-..+.+|.|||++|+.+|+.++|++|++.| +++
T Consensus 106 ~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 185 (285)
T 3d9h_A 106 SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDH 185 (285)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 5678888989884 88999999999999999999988443334556889999999999999999999998 444
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCcc---ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCR---DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAd---d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.|.||||.|+++|+.++|++|++.|++ +..|.|||+.|+..++.+++++|+.+-
T Consensus 186 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 245 (285)
T 3d9h_A 186 KISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFG 245 (285)
T ss_dssp CBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 789999999999999999999999996 457889999999999999999998764
No 64
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.88 E-value=9.6e-23 Score=188.48 Aligned_cols=113 Identities=24% Similarity=0.201 Sum_probs=59.8
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH--hhhhcccCCcchhhHHhhhcCc----cceehhhhccC-Ccc----ccchHHHHHH
Q 006847 337 VNQCFLEASRFGSTELVRILLQI--AQRNSLDVDVDLALGFASHYCK----IGTMECLVEEG-NAV----AFLGPLMRAA 405 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI--A~knak~~DgdTpLi~AS~nGh----LEVVKYLIS~G-d~e----~G~TPLI~AS 405 (629)
|.|||++|+++|++|+||+||+- |+.+.+|.+|.|||+++...++ .+++++|++.| |++ .|.||||+|+
T Consensus 168 g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~ 247 (337)
T 4g8k_A 168 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV 247 (337)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 45666666666666666666643 4455555555555554443332 23455555555 332 4555555555
Q ss_pred HhCCchHHHHHHHh-Ccc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 406 ERGCMQVVQWFVKR-GCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 406 enGhLEVVKYLIS~-GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+.|+.++|++|++. |++ +..|.||||.|+..|+.+||++|+.+.
T Consensus 248 ~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 296 (337)
T 4g8k_A 248 EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 296 (337)
T ss_dssp HTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS
T ss_pred HhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 55555555555543 332 344555555555555555555555543
No 65
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.88 E-value=9.5e-23 Score=184.04 Aligned_cols=156 Identities=22% Similarity=0.201 Sum_probs=125.7
Q ss_pred HHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-
Q 006847 325 LLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV- 395 (629)
Q Consensus 325 LlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e- 395 (629)
+.++|.+.|+|. |+|||++|+.+|++|+|++||+. ++.+..|.+|.|||++|+.+||.++|++|++.| +++
T Consensus 40 v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~ 119 (351)
T 3utm_A 40 LMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA 119 (351)
T ss_dssp HHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence 334455567763 89999999999999999999999 568889999999999999999999999999999 444
Q ss_pred ---ccchHHHHHHHhCCchHHHHHHHhCccc-------------------------------------------------
Q 006847 396 ---AFLGPLMRAAERGCMQVVQWFVKRGCRD------------------------------------------------- 423 (629)
Q Consensus 396 ---~G~TPLI~ASenGhLEVVKYLIS~GAdd------------------------------------------------- 423 (629)
.|.|||+.|+++|+.++|+||++.|++.
T Consensus 120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 199 (351)
T 3utm_A 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLA 199 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHH
Confidence 6999999999999999999999999962
Q ss_pred ---------cccCchhhHhhhc---ChHHHHHhhhcCCChh--hhhHhHHHHHHHhcccCCCCccceeehhhcc
Q 006847 424 ---------MDLCLALTAATSS---SQVEVAAYLLPHVPQH--VLAALSIEILKAAGERSGGSLDGVAFLLHSD 483 (629)
Q Consensus 424 ---------~~g~taL~tA~s~---gq~eVVkYLLS~vPq~--vl~alsieilkAA~~rs~gs~~GV~flL~Sn 483 (629)
..+.|||+.|+.. +..+++++|+.+.... ......+-+..|+. .|.++-|.+||...
T Consensus 200 ~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~---~g~~~~v~~Ll~~g 270 (351)
T 3utm_A 200 LEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAE---RAHNDVMEVLHKHG 270 (351)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH---TTCHHHHHHHHHTT
T ss_pred hhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHH---cCCHHHHHHHHHCC
Confidence 3467999999999 6689999999875322 22222222233444 56778888888764
No 66
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=5.1e-23 Score=189.71 Aligned_cols=126 Identities=19% Similarity=0.217 Sum_probs=106.5
Q ss_pred HHHHHHHhcCC-CC------cchhHHHHh-----hcCCHHHHHHHHHHhh-hhcccCCcchhhHHhhhcCccceehhhhc
Q 006847 324 GLLGLLVEGGA-DN------VNQCFLEAS-----RFGSTELVRILLQIAQ-RNSLDVDVDLALGFASHYCKIGTMECLVE 390 (629)
Q Consensus 324 gLlKsLIEgGa-D~------gnTPLL~AS-----~~GhLEVVKyLISIA~-knak~~DgdTpLi~AS~nGhLEVVKYLIS 390 (629)
.++++|++.|+ |. |.|||++|+ .+|+.|+|++|+.... .+..+.+|+|||++|+.+|+.++||+|++
T Consensus 125 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 204 (276)
T 4hbd_A 125 PVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLA 204 (276)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 46788888887 42 889999998 7788899999998854 55577788999999999999999999999
Q ss_pred cC-Ccc----ccchHHHHHHHhCCchHHHHHHH-hCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 391 EG-NAV----AFLGPLMRAAERGCMQVVQWFVK-RGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 391 ~G-d~e----~G~TPLI~ASenGhLEVVKYLIS-~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.| |++ .|+||||+|+++|+.++|++|++ .|++ +..|.|||+.|+..++.+++++|+++.
T Consensus 205 ~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 205 CEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99 544 78999999999999999999998 7886 567899999999999999999998764
No 67
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=4.8e-23 Score=171.89 Aligned_cols=115 Identities=26% Similarity=0.392 Sum_probs=104.2
Q ss_pred CcchhHHHHhhcCCHHHHHHHHHHhh--hhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhC
Q 006847 336 NVNQCFLEASRFGSTELVRILLQIAQ--RNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERG 408 (629)
Q Consensus 336 ~gnTPLL~AS~~GhLEVVKyLISIA~--knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenG 408 (629)
.+.|||+.|+++|++|+|++|++... .+..+.+|.|||++|+++|++++|++|++.| +++ .|.||||.|+++|
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcC
Confidence 48899999999999999999998733 4556777889999999999999999999999 544 7999999999999
Q ss_pred CchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 409 CMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 409 hLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
+.++|+||++.|++ +..|.|||+.|+..++.++++||+.+-.
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 132 (165)
T 3twr_A 87 HYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA 132 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999996 5679999999999999999999998753
No 68
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.87 E-value=1.5e-22 Score=192.84 Aligned_cols=126 Identities=17% Similarity=0.179 Sum_probs=96.8
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |.|||++|+++|+.|+|++|++. ++.+..+.+|.|||++|+++|+.+++++|++.| +.+
T Consensus 226 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 305 (437)
T 1n11_A 226 EVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD 305 (437)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC
Confidence 4667777777763 77888888888888888888876 456677777888888888888888888888877 333
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.|.||||.|+++|++++||||++.|++ +..|.|||+.|+..++.++|++|+.+.
T Consensus 306 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 367 (437)
T 1n11_A 306 ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367 (437)
T ss_dssp CCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCc
Confidence 678888888888888888888888875 446778888888888888888887764
No 69
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=7e-23 Score=179.52 Aligned_cols=116 Identities=22% Similarity=0.216 Sum_probs=102.1
Q ss_pred CCcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhcc-C-Ccc----ccchHHHHHHHh
Q 006847 335 DNVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEE-G-NAV----AFLGPLMRAAER 407 (629)
Q Consensus 335 D~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~-G-d~e----~G~TPLI~ASen 407 (629)
+.|.|||++|+.+|++|+|++||+. ++.+..|.+|.||||+|+.+|+.++|++|++. | +++ .|+||||+|+++
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence 3589999999999999999999998 56888999999999999999999999999999 7 444 799999999999
Q ss_pred CCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 408 GCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 408 GhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
|+.++|++|++.|++ +..|.|||+.|+..++.+++++|+..-.
T Consensus 151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 999999999999996 6689999999999999999999987653
No 70
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=1e-22 Score=164.15 Aligned_cols=106 Identities=18% Similarity=0.231 Sum_probs=95.7
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCc
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCM 410 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhL 410 (629)
|+|||++|+++|+.|+|++||+. ++.+..|.+|+||||+|+++|+.++|++|++.| +++ .|+||||+|+++|+.
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~ 86 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV 86 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 78999999999999999999998 568889999999999999999999999999999 544 799999999999999
Q ss_pred hHHHHHHHhCcc----ccccCchhhHhhhcChHHHH
Q 006847 411 QVVQWFVKRGCR----DMDLCLALTAATSSSQVEVA 442 (629)
Q Consensus 411 EVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVV 442 (629)
++|++|++.|++ +..|.|||+.|...+..+++
T Consensus 87 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 87 SCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122 (123)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHh
Confidence 999999999996 66899999999655544443
No 71
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=3.2e-22 Score=171.45 Aligned_cols=128 Identities=20% Similarity=0.185 Sum_probs=112.6
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCc-cceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCK-IGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGh-LEVVKYLIS~G-d~ 394 (629)
.++++|++.|+|. |.|||+.|+.+|+.|+|++|++. +..+..+.+|.|||++|+.+++ .+++++|++.| +.
T Consensus 90 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~ 169 (240)
T 3eu9_A 90 SMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCc
Confidence 4678899999984 88999999999999999999998 5588899999999999997777 89999999999 43
Q ss_pred c-----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCCh
Q 006847 395 V-----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQ 451 (629)
Q Consensus 395 e-----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq 451 (629)
+ .|.|||+.|+++|+.++|+||++.|++ +..|.|||+.|+..++.+++++|+.+-..
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 170 NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 3 688999999999999999999999996 56789999999999999999999876543
No 72
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.87 E-value=2.9e-23 Score=182.34 Aligned_cols=113 Identities=17% Similarity=0.108 Sum_probs=102.5
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc------c----ccchHHHHH
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA------V----AFLGPLMRA 404 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~------e----~G~TPLI~A 404 (629)
|+|||++|+.+|+.|+|++||+. ++.+..|.+|.|||++|+.+|+.++|++|++.| ++ + .|.||||+|
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A 124 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHH
Confidence 88999999999999999999998 668889999999999999999999999999988 31 1 699999999
Q ss_pred HHhCCchHHHHHHHhCcc----cc-ccCchhhHhhhcChHHHHHhhhcCC
Q 006847 405 AERGCMQVVQWFVKRGCR----DM-DLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 405 SenGhLEVVKYLIS~GAd----d~-~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+.+|+.++|+||++.|++ +. .|.||||.|+..++.++++||+.+.
T Consensus 125 ~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 174 (236)
T 1ikn_D 125 SIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG 174 (236)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999996 33 7899999999999999999999875
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.87 E-value=2.8e-22 Score=175.39 Aligned_cols=127 Identities=24% Similarity=0.215 Sum_probs=116.2
Q ss_pred HHHHHHHhcCCCC----------------cchhHHHHhhcCCHHHHHHHHHH--hhhhcccCCcchhhHHhhhcCc----
Q 006847 324 GLLGLLVEGGADN----------------VNQCFLEASRFGSTELVRILLQI--AQRNSLDVDVDLALGFASHYCK---- 381 (629)
Q Consensus 324 gLlKsLIEgGaD~----------------gnTPLL~AS~~GhLEVVKyLISI--A~knak~~DgdTpLi~AS~nGh---- 381 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++|++. +..+..|.+|.|||++|+.+|+
T Consensus 119 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 198 (285)
T 1wdy_A 119 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 198 (285)
T ss_dssp HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTH
T ss_pred HHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchH
Confidence 5788999999873 67999999999999999999986 6688899999999999999999
Q ss_pred cceehhhhccC-Ccc----ccchHHHHHHHhCCchHHHHHHH-hCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 382 IGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVVQWFVK-RGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 382 LEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS-~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
.+++++|++.| +++ .|.||||.|+++|++++|+||++ .|++ +..|.|||+.|+..++.++++||+.+..
T Consensus 199 ~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga 277 (285)
T 1wdy_A 199 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277 (285)
T ss_dssp HHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Confidence 99999999999 544 79999999999999999999999 8886 5689999999999999999999998753
No 74
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=1.5e-22 Score=190.74 Aligned_cols=131 Identities=17% Similarity=0.110 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHhcCCCC-------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCc---cceehhh
Q 006847 320 TVIQGLLGLLVEGGADN-------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCK---IGTMECL 388 (629)
Q Consensus 320 ~~iqgLlKsLIEgGaD~-------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGh---LEVVKYL 388 (629)
..++.++++|++.|+|. |+||||+|+++|++|+|++||+. |+.+.+|.+|+||||+|+.+|| .++++.|
T Consensus 107 ~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~l 186 (327)
T 1sw6_A 107 SLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186 (327)
T ss_dssp HHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHH
T ss_pred hhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHH
Confidence 34677888999999863 89999999999999999999999 6699999999999999999999 8888888
Q ss_pred hccC--Ccc----ccchHHHHHHH----hCCchHHHHHHHhCc-------------------------------------
Q 006847 389 VEEG--NAV----AFLGPLMRAAE----RGCMQVVQWFVKRGC------------------------------------- 421 (629)
Q Consensus 389 IS~G--d~e----~G~TPLI~ASe----nGhLEVVKYLIS~GA------------------------------------- 421 (629)
++.| +++ .|+||||+|++ .|+.++|++|++.|+
T Consensus 187 l~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~ 266 (327)
T 1sw6_A 187 LDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL 266 (327)
T ss_dssp HHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHC
T ss_pred HHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHH
Confidence 8877 333 89999999999 899999999998742
Q ss_pred ------------cccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 422 ------------RDMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 422 ------------dd~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
.+..|.||||.|+..|+.++|++|+.+..
T Consensus 267 ~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga 307 (327)
T 1sw6_A 267 DLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGA 307 (327)
T ss_dssp SHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 25679999999999999999999998853
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=1.8e-22 Score=171.52 Aligned_cols=115 Identities=22% Similarity=0.139 Sum_probs=103.7
Q ss_pred CCcchhHHHHhhcCCHHHHHHHHHH--hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHh
Q 006847 335 DNVNQCFLEASRFGSTELVRILLQI--AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAER 407 (629)
Q Consensus 335 D~gnTPLL~AS~~GhLEVVKyLISI--A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASen 407 (629)
..+.+||+.|+++|++|+|++||+. ...+..|.+|.|||++|+.+|+.++|++|++.| +++ .|.||||.|+.+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3477899999999999999999997 347889999999999999999999999999999 554 799999999999
Q ss_pred CCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 408 GCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 408 GhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
|+.++|++|++.|++ +..|.||||.|+..++.+++++|+.+.
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 128 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANG 128 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 999999999999996 567999999999999999999999864
No 76
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.4e-22 Score=174.46 Aligned_cols=103 Identities=22% Similarity=0.141 Sum_probs=94.0
Q ss_pred CcchhHHHHhhcCCHHHHHHHHHHhhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc-----cccchHHHHHHHhCC
Q 006847 336 NVNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA-----VAFLGPLMRAAERGC 409 (629)
Q Consensus 336 ~gnTPLL~AS~~GhLEVVKyLISIA~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~-----e~G~TPLI~ASenGh 409 (629)
.|.|||++|+++|+.|+|++||.-++.+.+|.+|.||||+|+.+|+.++|++|++.| ++ ..|+||||+|+.+|+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~ 122 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 122 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTTTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCc
Confidence 378999999999999999999996668889999999999999999999999999999 44 369999999999999
Q ss_pred chHHHHHHHhCcc----ccccCchhhHhhhcCh
Q 006847 410 MQVVQWFVKRGCR----DMDLCLALTAATSSSQ 438 (629)
Q Consensus 410 LEVVKYLIS~GAd----d~~g~taL~tA~s~gq 438 (629)
.++|++|++.|++ +..|.|||+.|+..++
T Consensus 123 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 123 PEVVEALVELGADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc
Confidence 9999999999997 5679999998887743
No 77
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.86 E-value=2.5e-22 Score=168.60 Aligned_cols=113 Identities=20% Similarity=0.176 Sum_probs=103.3
Q ss_pred cchhHHHHhhcCCHHHHHHHHHHhh--hhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCC
Q 006847 337 VNQCFLEASRFGSTELVRILLQIAQ--RNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGC 409 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISIA~--knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGh 409 (629)
+.|||+.|+.+|++|+|++||.... .+..|.+|+|||++|+.+|++++|++|++.| +++ .|.||||.|+.+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 3589999999999999999999833 6778999999999999999999999999999 544 79999999999999
Q ss_pred chHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 410 MQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 410 LEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
.++|++|++.|++ +..|.||||.|+..++.+++++|+.+-
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999997 567999999999999999999999874
No 78
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=5e-23 Score=204.25 Aligned_cols=150 Identities=15% Similarity=0.115 Sum_probs=119.1
Q ss_pred HHHHHHHhcCCCCcchhHHHHhhcCCHHHHHHHHHHhhh----hcccCCcchhhHHhhhcCccceehhhhccC-C-----
Q 006847 324 GLLGLLVEGGADNVNQCFLEASRFGSTELVRILLQIAQR----NSLDVDVDLALGFASHYCKIGTMECLVEEG-N----- 393 (629)
Q Consensus 324 gLlKsLIEgGaD~gnTPLL~AS~~GhLEVVKyLISIA~k----nak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d----- 393 (629)
.++++|++.|+| ++|||++|+++|++|+|++||+.... +.++.+|+|||++|+++||+|+||||++.| |
T Consensus 80 ~~~~~l~~~g~~-~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~ 158 (376)
T 2aja_A 80 QLWSDAHKKGIK-SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM 158 (376)
T ss_dssp THHHHHHHHTCC-HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHH
T ss_pred HHHHHHHHcCCC-cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc
Confidence 356889998876 56999999999999999999988542 246667889999999999999999999999 4
Q ss_pred cc-ccchHHHHHHHhCCchHHHHHHHhCcc------ccccCchhhHhh-hcChHHHHHhhhcCCChhhhhHhHHHHHHHh
Q 006847 394 AV-AFLGPLMRAAERGCMQVVQWFVKRGCR------DMDLCLALTAAT-SSSQVEVAAYLLPHVPQHVLAALSIEILKAA 465 (629)
Q Consensus 394 ~e-~G~TPLI~ASenGhLEVVKYLIS~GAd------d~~g~taL~tA~-s~gq~eVVkYLLS~vPq~vl~alsieilkAA 465 (629)
.. .++||||.|+++||+||||||++.|++ +..|.|||+.|+ ..|+.|||+||+++.. . ..+-+..||
T Consensus 159 i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-~----~~taL~~Aa 233 (376)
T 2aja_A 159 IQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-M----LAYAEIHEF 233 (376)
T ss_dssp HSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-H----HHHHHHCTT
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-c----cchHHHHHH
Confidence 11 349999999999999999999999997 235899999999 9999999999999531 1 222222344
Q ss_pred cccCCCCccceeehhhc
Q 006847 466 GERSGGSLDGVAFLLHS 482 (629)
Q Consensus 466 ~~rs~gs~~GV~flL~S 482 (629)
. .|.++-|.+|+..
T Consensus 234 ~---~g~~evv~lL~~~ 247 (376)
T 2aja_A 234 E---YGEKYVNPFIARH 247 (376)
T ss_dssp T---TTTTTHHHHHHHH
T ss_pred H---CCCHHHHHHHHhc
Confidence 3 5777777777653
No 79
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.86 E-value=2.2e-22 Score=192.34 Aligned_cols=124 Identities=23% Similarity=0.291 Sum_probs=65.2
Q ss_pred HHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH----hhhhcccCCcchhhHHhhhcC---ccceehhhhcc
Q 006847 325 LLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI----AQRNSLDVDVDLALGFASHYC---KIGTMECLVEE 391 (629)
Q Consensus 325 LlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI----A~knak~~DgdTpLi~AS~nG---hLEVVKYLIS~ 391 (629)
++++|++.|+|. |.|||++|+.+|++|+|++||+. ++.+..|.+|.|||++|+.+| ++++|++|++.
T Consensus 181 iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~ 260 (373)
T 2fo1_E 181 LVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK 260 (373)
T ss_dssp HHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC
Confidence 445555555552 55555555555555555555554 234445555555555555554 55555555555
Q ss_pred C-Ccc------------ccchHHHHHHHhCCchHHHHHHHhC-cc----ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 392 G-NAV------------AFLGPLMRAAERGCMQVVQWFVKRG-CR----DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 392 G-d~e------------~G~TPLI~ASenGhLEVVKYLIS~G-Ad----d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
| +++ .|.||||+|+++|++++|+||++.| ++ +..|.|||+.|+..|+.++|++|+.+
T Consensus 261 g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 335 (373)
T 2fo1_E 261 GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ 335 (373)
T ss_dssp TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 5 222 3555555555555555555555544 32 33455555555555555555555544
No 80
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.86 E-value=4.3e-22 Score=190.34 Aligned_cols=128 Identities=20% Similarity=0.271 Sum_probs=112.1
Q ss_pred HHHHHHHhcC---CC------CcchhHHHHhhcC---CHHHHHHHHHH-hhhh--------cccCCcchhhHHhhhcCcc
Q 006847 324 GLLGLLVEGG---AD------NVNQCFLEASRFG---STELVRILLQI-AQRN--------SLDVDVDLALGFASHYCKI 382 (629)
Q Consensus 324 gLlKsLIEgG---aD------~gnTPLL~AS~~G---hLEVVKyLISI-A~kn--------ak~~DgdTpLi~AS~nGhL 382 (629)
.++++|++.| +| .|.|||++|+.+| +.|+|++|++. ++.+ ..|.+|.|||++|+.+|+.
T Consensus 213 ~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 292 (373)
T 2fo1_E 213 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM 292 (373)
T ss_dssp HHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCH
T ss_pred HHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCH
Confidence 5678888877 44 2999999999998 89999999999 3343 3677899999999999999
Q ss_pred ceehhhhccC--Ccc----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCCh
Q 006847 383 GTMECLVEEG--NAV----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQ 451 (629)
Q Consensus 383 EVVKYLIS~G--d~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq 451 (629)
++|++|++.| +++ .|.||||+|+++|++++|++|++.|++ +..|.|||+.|+.+++.+|++||+.+-|.
T Consensus 293 ~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 293 PIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999886 333 799999999999999999999999996 56799999999999999999999998764
No 81
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=168.13 Aligned_cols=126 Identities=21% Similarity=0.205 Sum_probs=102.6
Q ss_pred HHHHHHHhcCCCC-------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN-------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~-------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|++. |.|||++|+.+|+.|+|++|++. ++.+..+.+|.|||++|+.+|+.+++++|++.| ++
T Consensus 56 ~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~ 135 (240)
T 3eu9_A 56 DLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV 135 (240)
T ss_dssp HHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc
Confidence 4677888888863 77888888888888888888887 557778888888888888888888888888888 44
Q ss_pred c----ccchHHHHHHHhCC-chHHHHHHHhCcc----cc-ccCchhhHhhhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGC-MQVVQWFVKRGCR----DM-DLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGh-LEVVKYLIS~GAd----d~-~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ .|.|||+.|+.+|+ .+++++|++.|++ +. .|.|||+.|+..++.+++++|+.+.
T Consensus 136 ~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 200 (240)
T 3eu9_A 136 DMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAG 200 (240)
T ss_dssp TCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred cccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 3 68888888887776 8888888888886 22 6778888888888888888888764
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.85 E-value=4.1e-23 Score=187.10 Aligned_cols=128 Identities=15% Similarity=0.022 Sum_probs=113.0
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc-
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA- 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~- 394 (629)
.++++|++.|+|. |.|||++|+.+|++|+|++||+. |+.+..|.+|+|||++|+.+|+.++|++|++.| ++
T Consensus 35 ~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 114 (229)
T 2vge_A 35 EVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIF 114 (229)
T ss_dssp HHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 5678899999984 99999999999999999999999 668999999999999999999999999999999 43
Q ss_pred ----cccchHHHHH--HHhCCchHHHHHHHhCcc------------------------------------ccccCchhhH
Q 006847 395 ----VAFLGPLMRA--AERGCMQVVQWFVKRGCR------------------------------------DMDLCLALTA 432 (629)
Q Consensus 395 ----e~G~TPLI~A--SenGhLEVVKYLIS~GAd------------------------------------d~~g~taL~t 432 (629)
..|.|||+.| +.+|+.++|+||++.|++ |..|.|||+.
T Consensus 115 ~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~ 194 (229)
T 2vge_A 115 ATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWW 194 (229)
T ss_dssp CCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEE
T ss_pred cccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHH
Confidence 2799999999 999999999999998763 3348899999
Q ss_pred hhhcChHHHHHh-hhcCCCh
Q 006847 433 ATSSSQVEVAAY-LLPHVPQ 451 (629)
Q Consensus 433 A~s~gq~eVVkY-LLS~vPq 451 (629)
|+..|+.++|+. +++-+|+
T Consensus 195 A~~~g~~~~v~~~~l~~~p~ 214 (229)
T 2vge_A 195 AALHGQEGYVPRNYFGLFPR 214 (229)
T ss_dssp EEETTEEEEEEGGGEESSCC
T ss_pred HHHcCCcceeehhhhhhCCC
Confidence 999999998875 5555554
No 83
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=6.3e-23 Score=203.51 Aligned_cols=123 Identities=18% Similarity=0.118 Sum_probs=105.7
Q ss_pred HHHHHHHhcCC------C---CcchhHHHHhhcCCHHHHHHHHHHhh----hhcccCCcchhhHHhhhcCccceehhhhc
Q 006847 324 GLLGLLVEGGA------D---NVNQCFLEASRFGSTELVRILLQIAQ----RNSLDVDVDLALGFASHYCKIGTMECLVE 390 (629)
Q Consensus 324 gLlKsLIEgGa------D---~gnTPLL~AS~~GhLEVVKyLISIA~----knak~~DgdTpLi~AS~nGhLEVVKYLIS 390 (629)
..+++|++.|+ + .++|||++|+++||+|+|++||+... .+..+.+ .|||++|+.+||+|+||+|++
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~ 184 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCE 184 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHH
Confidence 57889999998 3 28899999999999999999999852 2223333 899999999999999999999
Q ss_pred cC-C-----cc-ccchHHHHHH-HhCCchHHHHHHHhCccccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 391 EG-N-----AV-AFLGPLMRAA-ERGCMQVVQWFVKRGCRDMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 391 ~G-d-----~e-~G~TPLI~AS-enGhLEVVKYLIS~GAdd~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
.| + ++ .|.||||.|+ ++||+||||||++.|++ +.|||+.|+..|+.||++||+++..
T Consensus 185 ~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~---~~taL~~Aa~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 185 LAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM---LAYAEIHEFEYGEKYVNPFIARHVN 249 (376)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH---HHHHHHCTTTTTTTTHHHHHHHHHH
T ss_pred cCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc---cchHHHHHHHCCCHHHHHHHHhcCc
Confidence 99 6 33 6999999999 99999999999998864 8999999999999999999998753
No 84
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=3.4e-22 Score=181.23 Aligned_cols=114 Identities=23% Similarity=0.136 Sum_probs=103.0
Q ss_pred CcchhHHHHhhcCCHHHHHHHHHHhhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc-----ccchHHHHHHHhCC
Q 006847 336 NVNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV-----AFLGPLMRAAERGC 409 (629)
Q Consensus 336 ~gnTPLL~AS~~GhLEVVKyLISIA~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e-----~G~TPLI~ASenGh 409 (629)
.|.|||++|+++|++++|++||+-++.+..|.+|.||||+|+.+||.++|++|++.| +++ .|+||||.|+.+|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC
Confidence 389999999999999999999996668899999999999999999999999999999 543 59999999999999
Q ss_pred chHHHHHHHhCcc----ccccCchhhHhh----------------hcChHHHHHhhhcCC
Q 006847 410 MQVVQWFVKRGCR----DMDLCLALTAAT----------------SSSQVEVAAYLLPHV 449 (629)
Q Consensus 410 LEVVKYLIS~GAd----d~~g~taL~tA~----------------s~gq~eVVkYLLS~v 449 (629)
.++|++|++.|++ +..|.|||+.|+ ..|+.+++++|+.+.
T Consensus 124 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 124 PEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 9999999999997 567888888887 678889999998764
No 85
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=180.87 Aligned_cols=120 Identities=22% Similarity=0.159 Sum_probs=107.9
Q ss_pred HHHhcCCCCcchhHHHHhhcCCHHHHHHHHHHh--hhhcccCCcchhhHHhh-----hcCccceehhhhccC-Ccc----
Q 006847 328 LLVEGGADNVNQCFLEASRFGSTELVRILLQIA--QRNSLDVDVDLALGFAS-----HYCKIGTMECLVEEG-NAV---- 395 (629)
Q Consensus 328 sLIEgGaD~gnTPLL~AS~~GhLEVVKyLISIA--~knak~~DgdTpLi~AS-----~nGhLEVVKYLIS~G-d~e---- 395 (629)
++++.--..|+|||++|+.+|+.|+|++||+.. ..+..|.+|.|||++|+ .+++++++++|++.| +.+
T Consensus 102 ~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (276)
T 4hbd_A 102 YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ 181 (276)
T ss_dssp HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT
T ss_pred hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC
Confidence 334433335999999999999999999999994 68889999999999999 889999999999999 222
Q ss_pred ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhc
Q 006847 396 AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLP 447 (629)
Q Consensus 396 ~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS 447 (629)
.|.||||.|+.+|+.++||+|++.|++ +..|.|||+.|+..++.++++||+.
T Consensus 182 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 182 AGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 699999999999999999999999996 6689999999999999999999997
No 86
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.85 E-value=1.7e-21 Score=175.05 Aligned_cols=114 Identities=26% Similarity=0.240 Sum_probs=106.1
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCc
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCM 410 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhL 410 (629)
+.|||+.|+.+|++|+|++||+. ++.+..|.+|.|||++|+.+|++++|++|++.| +++ .|+||||.|+.+|+.
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~ 119 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 78999999999999999999998 568889999999999999999999999999999 554 699999999999999
Q ss_pred hHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCC
Q 006847 411 QVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVP 450 (629)
Q Consensus 411 EVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vP 450 (629)
++|+||++.|++ +..|.|||+.|+..++.+++++|+..-+
T Consensus 120 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~ 163 (299)
T 1s70_B 120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQG 163 (299)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcC
Confidence 999999999996 5679999999999999999999987543
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.84 E-value=4.7e-22 Score=176.90 Aligned_cols=126 Identities=10% Similarity=0.023 Sum_probs=110.3
Q ss_pred HHHHHhcCCCC-----cchhHHHHhhcCCH----HHHHHHHHH-hhhhcccCCcchhhHHhhhcCc------cceehhhh
Q 006847 326 LGLLVEGGADN-----VNQCFLEASRFGST----ELVRILLQI-AQRNSLDVDVDLALGFASHYCK------IGTMECLV 389 (629)
Q Consensus 326 lKsLIEgGaD~-----gnTPLL~AS~~GhL----EVVKyLISI-A~knak~~DgdTpLi~AS~nGh------LEVVKYLI 389 (629)
++.|++.|.+. |.||||+|+.+|+. |+|++||+. |+.|.+|.+|.||||+|+.+|+ +++|++||
T Consensus 22 ~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll 101 (186)
T 3t8k_A 22 FLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFL 101 (186)
T ss_dssp HHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHH
Confidence 45667777664 89999999999975 599999999 6699999999999999999998 67899999
Q ss_pred ccC-Ccc----ccc-hHHHHHHHhC-----CchHHHHHHH-hCcc----ccccCchhhHhhhcChHHHHHhhhcCCCh
Q 006847 390 EEG-NAV----AFL-GPLMRAAERG-----CMQVVQWFVK-RGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQ 451 (629)
Q Consensus 390 S~G-d~e----~G~-TPLI~ASenG-----hLEVVKYLIS-~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq 451 (629)
+.| |++ .|. ||||.|+.+| +.++|++|++ .|++ +..|.|||+.|...++.++|+||+..+.+
T Consensus 102 ~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 102 EKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999 555 688 9999999954 5679999999 9997 66899999999999999999999876543
No 88
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.4e-21 Score=151.66 Aligned_cols=87 Identities=28% Similarity=0.347 Sum_probs=79.8
Q ss_pred CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCC
Q 006847 336 NVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGC 409 (629)
Q Consensus 336 ~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGh 409 (629)
+|+|||++|+.+|+.|+|++||+. ++.+.+|.+|+|||++|+.+|+.++|++|++.| +++ .|.|||++|+++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 378999999999999999999998 668899999999999999999999999999999 544 79999999999999
Q ss_pred chHHHHHHHhCcc
Q 006847 410 MQVVQWFVKRGCR 422 (629)
Q Consensus 410 LEVVKYLIS~GAd 422 (629)
.++|+||++.||+
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 89
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=5.1e-22 Score=177.99 Aligned_cols=116 Identities=16% Similarity=0.097 Sum_probs=78.0
Q ss_pred cchhHHHHhhcCCHHHHHHHHHHhhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCch
Q 006847 337 VNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQ 411 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISIA~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLE 411 (629)
|.|||+.|++.|+.++|+.||+....-..+..+.|||++|+.+|++++|++|++.| +++ .|.||||+|+.+|+++
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~ 84 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTE 84 (239)
T ss_dssp --------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHH
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 88999999999999999999999654445677899999999999999999999999 554 7999999999999999
Q ss_pred HHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCChh
Q 006847 412 VVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQH 452 (629)
Q Consensus 412 VVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq~ 452 (629)
+|++|++.|++ +..|.||||.|+..++.+++++|+.+.+..
T Consensus 85 ~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 85 IVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129 (239)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 99999999996 568999999999999999999999886543
No 90
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.84 E-value=6.1e-21 Score=176.47 Aligned_cols=125 Identities=22% Similarity=0.264 Sum_probs=107.6
Q ss_pred HHHHHHHhcCCCC-------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN-------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~-------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++|+||+.|||. |.|||++|+++|+.|+|++||+. |..+..+.++.+|++++...++.++++++++.| +.
T Consensus 39 ~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (337)
T 4g8k_A 39 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADV 118 (337)
T ss_dssp HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT
T ss_pred HHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchh
Confidence 3778888888873 77888888888888888888888 557788888888888888888888888888888 44
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCcc--------------ccccCchhhHhhhcChHHHHHhhhcC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCR--------------DMDLCLALTAATSSSQVEVAAYLLPH 448 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAd--------------d~~g~taL~tA~s~gq~eVVkYLLS~ 448 (629)
+ .|.|||+.|+..|+.++|++|++.|++ +..|.|||+.|+..|+.++|+||+.+
T Consensus 119 ~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~ 190 (337)
T 4g8k_A 119 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 190 (337)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred hhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhc
Confidence 3 799999999999999999999999996 23589999999999999999999964
No 91
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=1.8e-21 Score=159.88 Aligned_cols=99 Identities=20% Similarity=0.153 Sum_probs=92.0
Q ss_pred HHHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCC-cchhhHHhhhcCccceehhhhccC-C
Q 006847 323 QGLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVD-VDLALGFASHYCKIGTMECLVEEG-N 393 (629)
Q Consensus 323 qgLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~D-gdTpLi~AS~nGhLEVVKYLIS~G-d 393 (629)
..++++|++.|+|. |.|||++|+. |+.|+|++||+. ++.+.+|.+ |+|||++|+.+|+.++|++|++.| +
T Consensus 25 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 103 (136)
T 1d9s_A 25 VETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 35788999999984 9999999999 999999999998 668899999 999999999999999999999999 5
Q ss_pred cc----ccchHHHHHHHhCCchHHHHHHHhCcc
Q 006847 394 AV----AFLGPLMRAAERGCMQVVQWFVKRGCR 422 (629)
Q Consensus 394 ~e----~G~TPLI~ASenGhLEVVKYLIS~GAd 422 (629)
++ .|.|||++|+++|+.++|+||++.|||
T Consensus 104 ~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 104 LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 44 799999999999999999999999986
No 92
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.83 E-value=1.2e-21 Score=164.25 Aligned_cols=110 Identities=19% Similarity=0.090 Sum_probs=89.8
Q ss_pred HHHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcch-hhHHhhhcCccceehhhhccC-C
Q 006847 323 QGLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDL-ALGFASHYCKIGTMECLVEEG-N 393 (629)
Q Consensus 323 qgLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdT-pLi~AS~nGhLEVVKYLIS~G-d 393 (629)
..++++|++.|+|. |+|||++|+ +|+.|+|++||+. ++.+.+|.+|.| |||+|+++|+.++|++|++.| +
T Consensus 25 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~ 103 (156)
T 1bi7_B 25 VEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103 (156)
T ss_dssp HHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCC
Confidence 35788999999984 999999985 9999999999998 568899999999 999999999999999999999 5
Q ss_pred cc----ccchHHHHHHHhCCchHHHHHHHhCccc----cccCchhhHh
Q 006847 394 AV----AFLGPLMRAAERGCMQVVQWFVKRGCRD----MDLCLALTAA 433 (629)
Q Consensus 394 ~e----~G~TPLI~ASenGhLEVVKYLIS~GAdd----~~g~taL~tA 433 (629)
++ .|.|||++|+++|+.++|+||++.|++- ..|.||+..+
T Consensus 104 ~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 104 LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 44 7999999999999999999999999973 4566666543
No 93
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=8.1e-21 Score=148.93 Aligned_cols=99 Identities=29% Similarity=0.384 Sum_probs=91.8
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |.|||++|+.+|+.|+|++|++. ++.+..|.+|+|||++|+.+|+.+++++|++.| +++
T Consensus 16 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 95 (126)
T 1n0r_A 16 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 95 (126)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc
Confidence 5778999999984 89999999999999999999998 558889999999999999999999999999999 543
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhCcc
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRGCR 422 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~GAd 422 (629)
.|.|||+.|+++|+.++|+||++.|||
T Consensus 96 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 96 AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 799999999999999999999999986
No 94
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.82 E-value=1.2e-20 Score=154.82 Aligned_cols=97 Identities=21% Similarity=0.189 Sum_probs=90.0
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV 395 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e 395 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++||+. ++.+.+|.+|+|||++|+.+|+.++|++|++.| +.+
T Consensus 28 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 107 (136)
T 2jab_A 28 DEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN 107 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 5788999999984 99999999999999999999999 568889999999999999999999999999999 543
Q ss_pred ----ccchHHHHHHHhCCchHHHHHHHhC
Q 006847 396 ----AFLGPLMRAAERGCMQVVQWFVKRG 420 (629)
Q Consensus 396 ----~G~TPLI~ASenGhLEVVKYLIS~G 420 (629)
.|.|||+.|+++|+.++|++|++.|
T Consensus 108 ~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 108 AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 7999999999999999999999987
No 95
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.82 E-value=6.7e-21 Score=179.57 Aligned_cols=114 Identities=14% Similarity=0.026 Sum_probs=100.6
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCC---HHHHHHHHHH--hhhhcccCCcchhhHHhhh----cCccceehhh
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGS---TELVRILLQI--AQRNSLDVDVDLALGFASH----YCKIGTMECL 388 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~Gh---LEVVKyLISI--A~knak~~DgdTpLi~AS~----nGhLEVVKYL 388 (629)
.++++|++.|+|. |+||||+|+.+|+ .++|+.||.. ++.+.+|.+|+||||+|++ +|+.++|++|
T Consensus 145 ~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~L 224 (327)
T 1sw6_A 145 ELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYY 224 (327)
T ss_dssp HHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHH
Confidence 5688999999994 9999999999999 7888888887 5688999999999999999 9999999999
Q ss_pred hccC----------------------------------------------Ccc----ccchHHHHHHHhCCchHHHHHHH
Q 006847 389 VEEG----------------------------------------------NAV----AFLGPLMRAAERGCMQVVQWFVK 418 (629)
Q Consensus 389 IS~G----------------------------------------------d~e----~G~TPLI~ASenGhLEVVKYLIS 418 (629)
++.| +++ .|+||||+|+++|+.++|++|++
T Consensus 225 l~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 304 (327)
T 1sw6_A 225 LDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 304 (327)
T ss_dssp HHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 8763 122 79999999999999999999999
Q ss_pred hCcc----ccccCchhhHhhhcC
Q 006847 419 RGCR----DMDLCLALTAATSSS 437 (629)
Q Consensus 419 ~GAd----d~~g~taL~tA~s~g 437 (629)
.||+ +..|.|||+.|+..|
T Consensus 305 ~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 305 YGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTCCTTCCCTTSCCGGGGTCC--
T ss_pred cCCCCcccCCCCCCHHHHHHhcC
Confidence 9997 668999999998765
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.81 E-value=1.9e-20 Score=177.71 Aligned_cols=113 Identities=16% Similarity=0.095 Sum_probs=95.7
Q ss_pred HHHHHHhcCCC------------CcchhHHHHhhc---CCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhh
Q 006847 325 LLGLLVEGGAD------------NVNQCFLEASRF---GSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECL 388 (629)
Q Consensus 325 LlKsLIEgGaD------------~gnTPLL~AS~~---GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYL 388 (629)
.++.|++.|+| .|.|||++|+++ |++|+|++||+. |+.+.+|.+|+||||+|+.+|+.++|++|
T Consensus 166 ~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~L 245 (301)
T 2b0o_E 166 SVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLL 245 (301)
T ss_dssp HHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 35567788877 278999999998 999999999999 66899999999999999999999999999
Q ss_pred hccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCccccccCchhhHhhhcChH
Q 006847 389 VEEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCRDMDLCLALTAATSSSQV 439 (629)
Q Consensus 389 IS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAdd~~g~taL~tA~s~gq~ 439 (629)
++.| |++ .|.|||++|+++|+.++|++|++.|++ .|.|||+.|+.+|+-
T Consensus 246 l~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 246 LKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--TTSSCCC--------
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--CCCChhHHHHhcCCc
Confidence 9999 554 799999999999999999999999997 578999999998873
No 97
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=1.2e-19 Score=140.82 Aligned_cols=82 Identities=24% Similarity=0.302 Sum_probs=75.2
Q ss_pred CcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcCh
Q 006847 368 DVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQ 438 (629)
Q Consensus 368 DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq 438 (629)
+|+||||+|+++|+++++++|++.| +++ .|+||||+|+.+|+.++|+||++.|++ +..|.|||+.|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 5899999999999999999999999 554 799999999999999999999999997 6679999999999999
Q ss_pred HHHHHhhhcCC
Q 006847 439 VEVAAYLLPHV 449 (629)
Q Consensus 439 ~eVVkYLLS~v 449 (629)
.++++||+.+.
T Consensus 81 ~~~~~~Ll~~g 91 (93)
T 1n0q_A 81 LEVVKLLLEAG 91 (93)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999763
No 98
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=2.7e-19 Score=179.39 Aligned_cols=113 Identities=16% Similarity=0.073 Sum_probs=90.6
Q ss_pred HHHHHHHhcCCC------------CcchhHHHHhh---cCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehh
Q 006847 324 GLLGLLVEGGAD------------NVNQCFLEASR---FGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMEC 387 (629)
Q Consensus 324 gLlKsLIEgGaD------------~gnTPLL~AS~---~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKY 387 (629)
..++.|++.|+| .|.||||+|++ +|++|+|++||+. |+.|..|.+|+||||+|+.+||.++|++
T Consensus 146 ~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~ 225 (497)
T 3lvq_E 146 LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 225 (497)
T ss_dssp HHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHH
T ss_pred HHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHH
Confidence 356788899988 28999999955 9999999999999 6799999999999999999999999999
Q ss_pred hhccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCccccccCchhhHhhhcCh
Q 006847 388 LVEEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCRDMDLCLALTAATSSSQ 438 (629)
Q Consensus 388 LIS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAdd~~g~taL~tA~s~gq 438 (629)
|++.| |++ .|.|||++|+++|+.++|++|++.|++.+. +|+|.++....
T Consensus 226 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~--~~~h~~~~~~~ 279 (497)
T 3lvq_E 226 LLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA--FPLHVDYSWVI 279 (497)
T ss_dssp HHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC--CcceeeccccC
Confidence 99999 555 799999999999999999999999998655 78888876443
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=1.8e-19 Score=180.54 Aligned_cols=116 Identities=14% Similarity=0.010 Sum_probs=103.9
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcc------cCCcchhhHHh---hhcCccceehhhhccC-Ccc----ccchHH
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSL------DVDVDLALGFA---SHYCKIGTMECLVEEG-NAV----AFLGPL 401 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak------~~DgdTpLi~A---S~nGhLEVVKYLIS~G-d~e----~G~TPL 401 (629)
..+.|+.|+.+|+++.|++||.. ++.|.. |.+|.||||+| +.+|++++|++|++.| |++ .|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 44789999999999999999998 446655 88899999999 5599999999999999 555 799999
Q ss_pred HHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCCChh
Q 006847 402 MRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHVPQH 452 (629)
Q Consensus 402 I~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~vPq~ 452 (629)
|+|+.+|+.++|++|++.||+ +..|.|||+.|+..++.++++||+.+....
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 999999999999999999997 668999999999999999999999986433
No 100
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=3.1e-19 Score=167.33 Aligned_cols=113 Identities=11% Similarity=-0.021 Sum_probs=99.7
Q ss_pred cchhHHHHhhcCCHHHHHHHHHHhh-------hhcccCCcchhhHHhhhc---CccceehhhhccC-Ccc----ccchHH
Q 006847 337 VNQCFLEASRFGSTELVRILLQIAQ-------RNSLDVDVDLALGFASHY---CKIGTMECLVEEG-NAV----AFLGPL 401 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISIA~-------knak~~DgdTpLi~AS~n---GhLEVVKYLIS~G-d~e----~G~TPL 401 (629)
..++|+.|+..|.++.|++|++... .+..+.+|.||||+|+.+ |++++|++|++.| |++ .|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 4579999999999999999998732 223477899999999999 9999999999999 554 799999
Q ss_pred HHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 402 MRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 402 I~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
|+|+.+|+.++|++|++.|++ +..|.|||+.|+..++.+++++|+.+.
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999996 668999999999999999999998753
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.77 E-value=3.2e-19 Score=169.34 Aligned_cols=222 Identities=16% Similarity=0.142 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHhhhcCCcchhhhhhhhhhhHhHHHH---------HHhhccccccCCCCCCCC---cchHHHHHHHHHHH
Q 006847 208 VTVMAQRLNERLQECNGDEVLKAEAGAKVQKFTEWA---------LRCIGFHSRCNDNCDAVS---HSSAVEIQLQLSAF 275 (629)
Q Consensus 208 v~vmaqrlherlqe~ngde~lkaea~akvqkftewa---------lkcig~hsr~~~~~~~~~---~~s~~e~qlqlsaf 275 (629)
..-..+++-++|+.-+|+..- |+-|++- .+|| ++|-|.|..-...-.++. .+.-...+++++
T Consensus 25 ~~~~~~~~~~~~~~~~~n~~c-~dc~~~~---p~w~s~~~g~~~c~~cs~~hr~lg~~is~v~sl~lD~w~~~~l~~~-- 98 (301)
T 2b0o_E 25 PHDLTKLLIAEVKSRPGNSQC-CDCGAAD---PTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLA-- 98 (301)
T ss_dssp --CHHHHHHHHHHTSTTTTBC-TTTCCBS---CCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTSCCCHHHHHHH--
T ss_pred HHHHHHHHHHHHhcCCCCCcC-CCCCCCC---CCeEEeecCeEEcHHHHHHHHhhCCCcccccccCcCCCCHHHHHHH--
Confidence 444455666667777776544 5555542 4676 589999954322222221 121122233222
Q ss_pred HHHHhhhCCCCCccchHHHHhhccchhhhhcccCCCCccccchHHHHHHHHH--HHHhcCCCC---cchhHHHHhhcCCH
Q 006847 276 KTFLDLAGNQLTGKDFTEAFDAACFPLTLFSSSFDPGWASGISATVIQGLLG--LLVEGGADN---VNQCFLEASRFGST 350 (629)
Q Consensus 276 k~fldlagn~Ltgk~fteafdaaCfpltlfs~~~~pgwasG~sa~~iqgLlK--sLIEgGaD~---gnTPLL~AS~~GhL 350 (629)
.. .||. .+.+.+.+ .+|- .....|.-.+.+ .....+++ |.-+....+ ..++|+.|+.+|++
T Consensus 99 ---~~-~GN~----~~n~i~E~-~l~~---~~~~kP~~~s~~--~~r~~~I~~Ky~~~~f~~~~~~~~~~L~~A~~~g~~ 164 (301)
T 2b0o_E 99 ---LN-MGNT----SFNEVMEA-QLPS---HGGPKPSAESDM--GTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDL 164 (301)
T ss_dssp ---HH-CCHH----HHHHHHTT-TCCS---SSCSCCCTTCCH--HHHHHHHHHHHTSCTTSCCCC-CHHHHHHHHHTTCH
T ss_pred ---HH-cCCH----HHHHHHHH-hhhh---ccCCCCCCcccH--HHHHHHHHHHHHhhhhhcccCchHHHHhhhhhccCH
Confidence 11 2444 33333332 2221 112234322332 22333322 332222222 45789999999999
Q ss_pred HHHHHHHHH-hhhhc------ccCCcchhhHHhhhc---CccceehhhhccC-Ccc----ccchHHHHHHHhCCchHHHH
Q 006847 351 ELVRILLQI-AQRNS------LDVDVDLALGFASHY---CKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVVQW 415 (629)
Q Consensus 351 EVVKyLISI-A~kna------k~~DgdTpLi~AS~n---GhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVVKY 415 (629)
+.|++||.. ++.+. .+.+|+||||+|+.+ |++++|++|++.| |++ .|+||||+|+.+|+.++|++
T Consensus 165 ~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~ 244 (301)
T 2b0o_E 165 LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 244 (301)
T ss_dssp HHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999977 44555 588899999999998 9999999999999 544 79999999999999999999
Q ss_pred HHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 416 FVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 416 LIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
|++.|++ |..|.|||+.|+..++.+++++|+.+.
T Consensus 245 Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 245 LLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 282 (301)
T ss_dssp HHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 9999997 667999999999999999999998754
No 102
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=1.9e-19 Score=143.10 Aligned_cols=87 Identities=22% Similarity=0.240 Sum_probs=80.9
Q ss_pred CcchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCC
Q 006847 336 NVNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGC 409 (629)
Q Consensus 336 ~gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGh 409 (629)
.|.|||++|+.+|+.|+|++||+. ++.+.+|.+|.|||++|+.+|+.++|++|++.| +.+ .|.|||+.|+.+|+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~ 87 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGH 87 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCC
Confidence 489999999999999999999998 558889999999999999999999999999999 543 79999999999999
Q ss_pred chHHHHHHHhCcc
Q 006847 410 MQVVQWFVKRGCR 422 (629)
Q Consensus 410 LEVVKYLIS~GAd 422 (629)
.++|++|++.|++
T Consensus 88 ~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 88 HEIVKLLDAKGAD 100 (115)
T ss_dssp HHHHHHHHTTSSS
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999997
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=3.2e-19 Score=176.94 Aligned_cols=113 Identities=25% Similarity=0.197 Sum_probs=104.9
Q ss_pred cchhHHHHhhc-CCHHHHHHHHHH-hhhhccc--CCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHh
Q 006847 337 VNQCFLEASRF-GSTELVRILLQI-AQRNSLD--VDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAER 407 (629)
Q Consensus 337 gnTPLL~AS~~-GhLEVVKyLISI-A~knak~--~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASen 407 (629)
+.|||+.|+.+ |++|+|++||.. ++.+..+ .+|.||||+|+.+|++++|++|++.| |++ .|+||||+|+.+
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 67999999999 999999999998 5688877 88999999999999999999999999 554 799999999999
Q ss_pred CCchHHHHHHHhCcc----ccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 408 GCMQVVQWFVKRGCR----DMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 408 GhLEVVKYLIS~GAd----d~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
|+.++|++|++.|++ +..|.|||+.|+..++.++++||+.+.
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999997 668999999999999999999998654
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=5.1e-19 Score=165.84 Aligned_cols=98 Identities=15% Similarity=0.036 Sum_probs=88.8
Q ss_pred HHHHHhcCCC------------CcchhHHHHhhc---CCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhh
Q 006847 326 LGLLVEGGAD------------NVNQCFLEASRF---GSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLV 389 (629)
Q Consensus 326 lKsLIEgGaD------------~gnTPLL~AS~~---GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLI 389 (629)
++.|++.|+| .|.||||+|+++ |++|+|++||+. |+.+.+|.+|+||||+|+.+|+.++|++|+
T Consensus 146 ~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll 225 (278)
T 1dcq_A 146 LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL 225 (278)
T ss_dssp HHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3455666665 489999999999 999999999999 679999999999999999999999999999
Q ss_pred ccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCccc
Q 006847 390 EEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCRD 423 (629)
Q Consensus 390 S~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAdd 423 (629)
+.| |++ .|.|||++|+++|+.++|++|++.|+++
T Consensus 226 ~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 226 RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999 555 8999999999999999999999999964
No 105
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.74 E-value=1.3e-18 Score=154.73 Aligned_cols=110 Identities=10% Similarity=0.035 Sum_probs=96.0
Q ss_pred cchhHHHHhhcCCHHHHHHHHHHhhhhccc-CCcchhhHHhhhcCcc----ceehhhhccC-Ccc----ccchHHHHHHH
Q 006847 337 VNQCFLEASRFGSTELVRILLQIAQRNSLD-VDVDLALGFASHYCKI----GTMECLVEEG-NAV----AFLGPLMRAAE 406 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISIA~knak~-~DgdTpLi~AS~nGhL----EVVKYLIS~G-d~e----~G~TPLI~ASe 406 (629)
++++|+.|++.|.+|.|+.|+... .+.++ .+|+||||+|+.+|+. ++|++||+.| |++ .|+||||+|+.
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~-~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG-YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS-SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 578999999999999999998764 44455 7799999999999975 5999999999 555 79999999999
Q ss_pred hCC------chHHHHHHHhCcc----ccccC-chhhHhhhcC-----hHHHHHhhhc
Q 006847 407 RGC------MQVVQWFVKRGCR----DMDLC-LALTAATSSS-----QVEVAAYLLP 447 (629)
Q Consensus 407 nGh------LEVVKYLIS~GAd----d~~g~-taL~tA~s~g-----q~eVVkYLLS 447 (629)
.|+ +++|++|++.||+ |..|. ||||.|+..+ +.+++++|+.
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred cCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 997 6899999999997 66799 9999999944 4679999988
No 106
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.72 E-value=6.1e-19 Score=154.58 Aligned_cols=100 Identities=14% Similarity=0.075 Sum_probs=85.0
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH--hhhhcccCCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI--AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI--A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
.++++|++.|+|. |+|||++|+.+|+.|+|++||+. ++.+.+|.+|+|||++|+.+|+.++|++|++.| ++
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 87 SWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGART 166 (222)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred HHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4788999999984 99999999999999999999986 568889999999999999999999999999999 55
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCccc
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCRD 423 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAdd 423 (629)
+ .|.|||++|+.+|+.++|++|++.|+..
T Consensus 167 ~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 167 DLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp CCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred ccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 4 8999999999999999999999999964
No 107
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.71 E-value=1e-17 Score=136.73 Aligned_cols=87 Identities=22% Similarity=0.247 Sum_probs=80.2
Q ss_pred cccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhh
Q 006847 364 SLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAAT 434 (629)
Q Consensus 364 ak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~ 434 (629)
..|.+|+|||++|+.+|++++|++|++.| +++ .|.||||.|+++|+.++|+||++.|++ +..|.||||.|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 46888999999999999999999999999 544 799999999999999999999999996 567999999999
Q ss_pred hcChHHHHHhhhcCCC
Q 006847 435 SSSQVEVAAYLLPHVP 450 (629)
Q Consensus 435 s~gq~eVVkYLLS~vP 450 (629)
..++.+++++|+.+..
T Consensus 85 ~~~~~~~v~~Ll~~ga 100 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGA 100 (137)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCC
Confidence 9999999999998753
No 108
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.69 E-value=1.2e-17 Score=134.46 Aligned_cols=87 Identities=20% Similarity=0.264 Sum_probs=77.3
Q ss_pred ccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhh
Q 006847 365 LDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATS 435 (629)
Q Consensus 365 k~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s 435 (629)
.+..|+|||++|+++|++++|++|++.| +++ .|+||||+|+.+|+.++|+||++.|++ +..|.||||.|+.
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 4667899999999999999999999999 444 799999999999999999999999996 6679999999999
Q ss_pred cChHHHHHhhhcCCCh
Q 006847 436 SSQVEVAAYLLPHVPQ 451 (629)
Q Consensus 436 ~gq~eVVkYLLS~vPq 451 (629)
.++.++++||+.+-+.
T Consensus 83 ~~~~~~v~~Ll~~ga~ 98 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGAD 98 (123)
T ss_dssp HTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999988643
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.69 E-value=1.2e-17 Score=132.61 Aligned_cols=87 Identities=18% Similarity=0.163 Sum_probs=80.8
Q ss_pred ccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHhhh
Q 006847 365 LDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAATS 435 (629)
Q Consensus 365 k~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA~s 435 (629)
+|.+|.|||++|+.+|+++++++|++.| +++ .|.||||.|+.+|+.++|+||++.|++ +..|.|||+.|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 6889999999999999999999999999 543 799999999999999999999999997 5679999999999
Q ss_pred cChHHHHHhhhcCCCh
Q 006847 436 SSQVEVAAYLLPHVPQ 451 (629)
Q Consensus 436 ~gq~eVVkYLLS~vPq 451 (629)
.++.+++++|+++...
T Consensus 85 ~~~~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGAD 100 (115)
T ss_dssp TTCHHHHHHHHTTSSS
T ss_pred CCCHHHHHHHHHcCCC
Confidence 9999999999988643
No 110
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.68 E-value=2.2e-17 Score=142.09 Aligned_cols=112 Identities=25% Similarity=0.164 Sum_probs=100.1
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhccc-CCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLD-VDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~-~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
..+++|++ |+|. |.||||+|+.+|+.|+|++||+. ++.+..+ .+|+||||+|+.+|+.++|++|++.| ++
T Consensus 58 ~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 58 QALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 136 (183)
T ss_dssp HHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC
Confidence 46788888 8874 99999999999999999999999 5688888 89999999999999999999999999 54
Q ss_pred c----ccchHHHHHHHhCCchHHHHHHHhCccccccCchhhHhhhcChHHHHHhhhcCC
Q 006847 395 V----AFLGPLMRAAERGCMQVVQWFVKRGCRDMDLCLALTAATSSSQVEVAAYLLPHV 449 (629)
Q Consensus 395 e----~G~TPLI~ASenGhLEVVKYLIS~GAdd~~g~taL~tA~s~gq~eVVkYLLS~v 449 (629)
+ .|.|||+.|++.++. ..+.++|+.|...++.+++++|.+++
T Consensus 137 ~~~d~~g~tpl~~A~~~~~~-------------~~~~~~l~~a~~~~~~~i~~~L~~~~ 182 (183)
T 3deo_A 137 EVEDERGLTALELAREILKT-------------TPKGNPMQFGRRIGLEKVINVLEGQV 182 (183)
T ss_dssp TCCCTTSCCHHHHHHHHHHT-------------CCCCSHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCCCCHHHHHHHhccC-------------cccccHHHHHHHcCHHHHHHHHHHhh
Confidence 4 899999999987654 34578999999999999999999875
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=2.3e-17 Score=132.65 Aligned_cols=80 Identities=21% Similarity=0.273 Sum_probs=40.3
Q ss_pred cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCc
Q 006847 337 VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCM 410 (629)
Q Consensus 337 gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhL 410 (629)
|.|||++|+.+|+.|+|++||+. ++.+.+|.+|+|||++|+.+|+.++|++|++.| +.+ .|.|||++|+.+|+.
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 103 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE 103 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCH
Confidence 44555555555555555555544 334444555555555555555555555555555 222 345555555555555
Q ss_pred hHHHHH
Q 006847 411 QVVQWF 416 (629)
Q Consensus 411 EVVKYL 416 (629)
++|++|
T Consensus 104 ~~~~~L 109 (110)
T 2zgd_A 104 DLAEIL 109 (110)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555544
No 112
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.68 E-value=1.7e-17 Score=150.40 Aligned_cols=98 Identities=27% Similarity=0.243 Sum_probs=86.9
Q ss_pred HHHHHHHhcCCCC------cchhHHHHhhcCCHHHHHHHHHH-hhhhccc-CCcchhhHHhhhcCccceehhhhccC-Cc
Q 006847 324 GLLGLLVEGGADN------VNQCFLEASRFGSTELVRILLQI-AQRNSLD-VDVDLALGFASHYCKIGTMECLVEEG-NA 394 (629)
Q Consensus 324 gLlKsLIEgGaD~------gnTPLL~AS~~GhLEVVKyLISI-A~knak~-~DgdTpLi~AS~nGhLEVVKYLIS~G-d~ 394 (629)
..+++|++ |+|. |.||||+|+.+|+.|+|++||+. |+.+..+ .+|+||||+|+.+|+.++|++|++.| ++
T Consensus 59 ~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 59 QALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp HHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 46778888 8874 99999999999999999999999 6688888 88999999999999999999999999 55
Q ss_pred c----ccchHHHHHH----------------HhCCchHHHHHHHhCcc
Q 006847 395 V----AFLGPLMRAA----------------ERGCMQVVQWFVKRGCR 422 (629)
Q Consensus 395 e----~G~TPLI~AS----------------enGhLEVVKYLIS~GAd 422 (629)
+ .|.|||+.|+ +.|+.++|++|.+.+.+
T Consensus 138 ~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 138 EVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp TCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 4 6888887777 77999999999998775
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.68 E-value=3e-17 Score=162.88 Aligned_cols=115 Identities=20% Similarity=0.086 Sum_probs=90.9
Q ss_pred HHHHHHHhcCCCC--------cchhHHHHhhcCCHHHHHHHHHH-hhhhcccCCcchhhHHhhhcCccceehhhhccC-C
Q 006847 324 GLLGLLVEGGADN--------VNQCFLEASRFGSTELVRILLQI-AQRNSLDVDVDLALGFASHYCKIGTMECLVEEG-N 393 (629)
Q Consensus 324 gLlKsLIEgGaD~--------gnTPLL~AS~~GhLEVVKyLISI-A~knak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d 393 (629)
..++.|++.|+|. |.||||+|+.+|++|+|++||+. |+.+..|.+|+||||+|+.+|+.++|++|++.| |
T Consensus 214 ~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad 293 (368)
T 3jue_A 214 PTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCC
Confidence 4677888999983 78999999999999999999999 669999999999999999999999999999999 5
Q ss_pred cc----ccchHHHHHHHhCCchHHHHHHHhCccc-------cccCchhhHhhhcCh
Q 006847 394 AV----AFLGPLMRAAERGCMQVVQWFVKRGCRD-------MDLCLALTAATSSSQ 438 (629)
Q Consensus 394 ~e----~G~TPLI~ASenGhLEVVKYLIS~GAdd-------~~g~taL~tA~s~gq 438 (629)
++ .|.|||++|++.|+.++|++|.+.|.++ ..+.|+++.+-.+..
T Consensus 294 ~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 294 LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHh
Confidence 54 7999999999999999999999999753 346677776665543
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=2.6e-17 Score=132.40 Aligned_cols=84 Identities=20% Similarity=0.214 Sum_probs=75.0
Q ss_pred hcccCCcchhhHHhhhcCccceehhhhccC-Ccc----ccchHHHHHHHhCCchHHHHHHHhCcc----ccccCchhhHh
Q 006847 363 NSLDVDVDLALGFASHYCKIGTMECLVEEG-NAV----AFLGPLMRAAERGCMQVVQWFVKRGCR----DMDLCLALTAA 433 (629)
Q Consensus 363 nak~~DgdTpLi~AS~nGhLEVVKYLIS~G-d~e----~G~TPLI~ASenGhLEVVKYLIS~GAd----d~~g~taL~tA 433 (629)
...|.+|+|||++|+.+|++++|++|++.| +++ .|.||||+|+.+|+.++|+||++.|++ +..|.|||+.|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 347889999999999999999999999999 543 799999999999999999999999996 56799999999
Q ss_pred hhcChHHHHHhhh
Q 006847 434 TSSSQVEVAAYLL 446 (629)
Q Consensus 434 ~s~gq~eVVkYLL 446 (629)
+..++.++++||.
T Consensus 98 ~~~~~~~~~~~L~ 110 (110)
T 2zgd_A 98 IDNGNEDLAEILQ 110 (110)
T ss_dssp HHHTCHHHHHHHC
T ss_pred HHcCCHHHHHHhC
Confidence 9999999999983
No 115
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=27.91 E-value=8.2 Score=32.90 Aligned_cols=33 Identities=21% Similarity=0.560 Sum_probs=25.7
Q ss_pred HHhhhhhhhhhhhhhccccccchhHHHHHHHHHHHhh
Q 006847 184 ALRTSFLASCVSACQSRTMSLQDTVTVMAQRLNERLQ 220 (629)
Q Consensus 184 ~lrtsflaSCvsac~srt~sl~d~v~vmaqrlherlq 220 (629)
..+-.|.-+| ++|||-+|||-+.|+ ++|++++-
T Consensus 39 ~V~V~L~GaC-~gCpss~~TLk~gIE---~~L~~~vP 71 (88)
T 1xhj_A 39 IVKLQLHGAC-GTCPSSTITLKAGIE---RALHEEVP 71 (88)
T ss_dssp EEEEEEESSC-CSSCHHHHHHHHHHH---HHHHHHST
T ss_pred EEEEEEeecC-CCCcchHHHHHHHHH---HHHHHhCC
Confidence 4455677889 899999999998887 67777663
No 116
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=25.86 E-value=31 Score=32.12 Aligned_cols=31 Identities=26% Similarity=0.546 Sum_probs=23.3
Q ss_pred hhhhhhhccccccchhHHHHHHHHHHHhhhcC
Q 006847 192 SCVSACQSRTMSLQDTVTVMAQRLNERLQECN 223 (629)
Q Consensus 192 SCvsac~srt~sl~d~v~vmaqrlherlqe~n 223 (629)
.||.+||.+++++.|.-.. ....++|+.+-.
T Consensus 151 ~Cv~~CP~~Ai~~~~~~~~-~~~~~~~~~~~~ 181 (214)
T 1h0h_B 151 ACVTSCPTGAMNFGDLSEM-EAMASARLAEIK 181 (214)
T ss_dssp HHHHHCSSSCEEEEEHHHH-HHHHHHHHHHHT
T ss_pred hHHHhcCcccEEEccHHHH-HHHHHHHHHHhh
Confidence 6999999999999987654 344467766544
No 117
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=23.80 E-value=14 Score=28.52 Aligned_cols=16 Identities=25% Similarity=0.684 Sum_probs=13.6
Q ss_pred hhhhhhhhccccccch
Q 006847 191 ASCVSACQSRTMSLQD 206 (629)
Q Consensus 191 aSCvsac~srt~sl~d 206 (629)
.-|+.+||..++++.+
T Consensus 47 ~~C~~~CP~~Ai~~~~ 62 (82)
T 2fgo_A 47 PQCQQVCPVDCIPLDD 62 (82)
T ss_dssp CHHHHHCTTCCCCBCT
T ss_pred CHhHhhCCcccEEccC
Confidence 3699999999998864
No 118
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=21.40 E-value=13 Score=31.76 Aligned_cols=34 Identities=24% Similarity=0.497 Sum_probs=25.9
Q ss_pred HHhhhhhhhhhhhhhccccccchhHHHHHHHHHHHhhh
Q 006847 184 ALRTSFLASCVSACQSRTMSLQDTVTVMAQRLNERLQE 221 (629)
Q Consensus 184 ~lrtsflaSCvsac~srt~sl~d~v~vmaqrlherlqe 221 (629)
..+-.|.-+| ++|||-+|||-+.|. ++|++++-|
T Consensus 46 ~V~v~l~GaC-~gC~ss~~Tlk~gIE---~~L~~~vpe 79 (92)
T 1veh_A 46 IVRLKLQGSC-TSCPSSIITLKSGIQ---NMLQFYIPE 79 (92)
T ss_dssp EEEECCCCCC-CCCHHHHHHTHHHHH---HHHHHHCSS
T ss_pred EEEEEEeecC-CCCCCcHHHHHHHHH---HHHHHHCCC
Confidence 4455677789 799999999998887 667766543
Done!