Query 006853
Match_columns 628
No_of_seqs 217 out of 825
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 10:41:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006853hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lwt_X Phosphoinositide phosph 100.0 2E-131 7E-136 1091.1 41.0 490 23-595 8-505 (505)
2 3k9o_A Ubiquitin-conjugating e 24.4 1.8E+02 0.0062 27.3 7.5 100 483-594 93-200 (201)
3 3e46_A Ubiquitin-conjugating e 16.7 2.9E+02 0.0099 27.1 7.3 76 515-595 175-253 (253)
4 4f8x_A Endo-1,4-beta-xylanase; 10.9 1.9E+02 0.0063 29.7 4.1 109 291-405 80-202 (335)
5 1ta3_B Endo-1,4-beta-xylanase; 10.9 1.2E+02 0.0041 30.5 2.6 51 291-346 78-128 (303)
6 3r45_C Holliday junction recog 10.9 1.3E+02 0.0046 23.8 2.2 19 321-339 26-44 (81)
7 3cui_A EXO-beta-1,4-glucanase; 9.8 1.2E+02 0.0042 30.4 2.3 50 292-347 77-126 (315)
8 2uwf_A Endoxylanase, alkaline 9.5 2.5E+02 0.0087 28.8 4.6 25 322-346 123-147 (356)
9 1nyc_A Staphostatin B, cystein 7.1 89 0.003 25.6 -0.2 17 584-600 21-37 (111)
10 1r85_A Endo-1,4-beta-xylanase; 6.2 3.9E+02 0.013 27.7 4.1 27 321-347 132-158 (379)
No 1
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-131 Score=1091.15 Aligned_cols=490 Identities=26% Similarity=0.478 Sum_probs=378.8
Q ss_pred EEeeCCEEEEEeecCCCCceEEEEEeCCCCCccceeccccccChHHHHHHHhhhhcCCCccCCcceeeeeeeeEEEEEec
Q 006853 23 LYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFL 102 (628)
Q Consensus 23 Lyet~~~fyi~~~~~~~~~~~vL~IdR~~~~~l~i~ed~~~~~~~e~~~lL~~i~~~~~~~g~~~~~~~~~GilG~i~l~ 102 (628)
.-+||++|||+|+++....-.+|.|||.++ ++.+.+... ++ .. ..+++++||||+|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~i~r~~~-~~~~~~~~~-------------~~----~~---~~~~~i~GilG~i~l~ 66 (505)
T 3lwt_X 8 YVQNADGIFFKLAEGKGTNDAVIHLANQDQ-GVRVLGAEE-------------FP----VQ---GEVVKIASLMGFIKLK 66 (505)
T ss_dssp EEEETTEEEEEESSCCSSCCCEEEEETTTC-CEEEECGGG-------------SC----SS---SCCEEESEEEEEEEET
T ss_pred EEECCCEEEEEECCCCCCCcceEEEEcCCC-eEEeccccc-------------CC----Cc---CceeEEEEEEEEEEEC
Confidence 456999999999874222237999999998 566553211 11 01 1267899999999999
Q ss_pred CCeEEEEEeCeeEeEEeCCeeEEEeeeeeEeecCCCCcccccccchhHHHHHHHhhcCCCCCceEEeccccccccccccc
Q 006853 103 EPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNL 182 (628)
Q Consensus 103 ~~~yL~vIt~~~~Vg~i~gh~Iy~I~~~~~i~l~~~~~~~~~~~~~~e~~~~~ll~~~~~~~~fYfS~tyDLT~slQ~~~ 182 (628)
+++||+|||+++.||.|+||.||+|++++|||++.+. ..+++|.+|+++|+.++++++|||||+||||+++|++.
T Consensus 67 ~~~YlivIT~~~~vg~i~gh~Iy~I~~~~~ipl~~~~-----~~~~~E~~yl~ll~~~l~s~~FYfS~~yDLT~slQ~~~ 141 (505)
T 3lwt_X 67 LNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNS-----RIDSEEAEYIKLLELHLKNSTFYFSYTYDLTNSLQRNE 141 (505)
T ss_dssp TEEEEEEEEEEEEEEEETTEEEEEEEEEEEEESCTTC-----CCCHHHHHHHHHHHHHHHHCCCEECSSSCTTSCHHHHH
T ss_pred CCcEEEEEEccEEEEEECCeEEEEEEEEEEEEecCcc-----ccChhHHHHHHHHHHHhcCCCEEEeCCcCCCcchhhcc
Confidence 9999999999999999999999999999999999542 34689999999999999999999999999999999986
Q ss_pred cCCC-CCCCccccccccchhhhHHHHhhc----cCCCeeEEeeeeeeEeeeeeeecceeEEEEEEeeeccccCccccccc
Q 006853 183 CNNG-TGQSQYESMFVWNHFLTRGIRNTL----KNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRG 257 (628)
Q Consensus 183 ~~~~-~~~~~~d~rF~WN~~L~~~~~~~~----~~~~w~~plI~Gfv~~~~~~~~~~~~~~~LISRRS~~raGTRy~~RG 257 (628)
.... ..+..+|++|+||++|+++|++.. +...|++|+|||||++..+.+.++.+.+||||||||+||||||++||
T Consensus 142 ~~~~~~~~~~~d~~F~WN~~l~~~l~~~~~~~~~~~~~~~piI~Gfv~~~~~~~~~~~~~~tLISRRS~~raGtRy~~RG 221 (505)
T 3lwt_X 142 KVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRG 221 (505)
T ss_dssp HHCSCCCGGGSCTTTCTTTGGGHHHHHHHTTCGGGGGGCCCCBSSEEEEEEEEETTEEEEEEEEEEECCCCCSSSCCSSS
T ss_pred ccCccccccCCCCceechHHHHHHHHHhcccCcchhhhhhHhhcCceEEEEEEECCceEEEEEEEEEecccCCccccccC
Confidence 5332 345567999999999999998642 23589999999999999999999999999999999999999999999
Q ss_pred CCCCCccceeeeEeEEEEecCCCCCcceEEEEEEEecCcceeeeecCCCCCcccceEEcCCCCchHHHHHHHHHHHHHhC
Q 006853 258 VNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYG 337 (628)
Q Consensus 258 id~~G~VANfVETEqIv~~~~~~~~~~~~~SfVQiRGSVPlfW~Q~~~~l~~kp~i~~~~~d~~~~a~~~HF~~L~~~YG 337 (628)
||++|||||||||||||+.+...+.+..++||||+||||||||+|.+ .+.+||+|.+. +++++||.+||++|.++||
T Consensus 222 idd~G~VANfVETEqIv~~~~~~~~~~~~~SfvQiRGSVPlfW~Q~~-~l~~kP~i~i~--~~~~~a~~kHF~~L~~~YG 298 (505)
T 3lwt_X 222 VDKDGNVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWAEIN-NLKYKPNLVLG--ENSLDATKKHFDQQKELYG 298 (505)
T ss_dssp BCTTSCCSCEEEEEEEEEEECTTTCCEEEEEEEEEEECCCSBSCCCC-CSSSCCCCCCC--HHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCCccceeeEEEEEEeCCCCCCCccEEEEEEeccccCceeeecC-CcCcCCCeeec--CchHHHHHHHHHHHHHHhC
Confidence 99999999999999999987543334489999999999999999976 68899999885 4599999999999999999
Q ss_pred CcEEEEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeecccccc--ccccHHHHHHHHHHhhhhhcceee
Q 006853 338 NPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR--KAINALQILGRAGAYALSLTGIFY 415 (628)
Q Consensus 338 ~pv~vvNLl~~~~~k~~E~~L~~~f~~~v~~ln~~l~~~~~i~y~~fDfh~~~k--k~~n~l~~l~~~~~~~l~~~gff~ 415 (628)
. ++|||||+++ ++|.+|+++|+++|+++|+ ++|+|++||||++|| +..++..+++.+++..++..|||+
T Consensus 299 ~-~~iVNLl~~k---~~E~~L~~~y~~~v~~l~~-----~~i~y~~fDfh~~~k~~~~~~v~~ll~~l~~~~~~~~g~f~ 369 (505)
T 3lwt_X 299 D-NYLVNLVNQK---GHELPVKEGYESVVHALND-----PKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLGLSNEDFFH 369 (505)
T ss_dssp E-EEEEEECCCS---SCCCHHHHHHHHHHHHHCC-----TTEEEEEECCCSSTTTHHHHHHHHHHHHHHHHTCCTTCSEE
T ss_pred C-cEEEecccCC---CchhHHHHHHHHHHHHhcc-----cCCceEEecchHhhhccchhHHHHHHHHHHHhcccccCceE
Confidence 8 5689999975 4599999999999999974 579999999999999 556777788888877788889998
Q ss_pred eccCCCcCcccccccccCCCCCCCcccCCCCccccccccccCCCCCCCCCCcCCCcceeeeeEEeeecCccchhhhHHHH
Q 006853 416 CQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQY 495 (628)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~GV~RtNClDCLDRTNv~Q~ 495 (628)
....+. + ..+++...|+||+|||||||||||||||+
T Consensus 370 ~~~~~~-------------------------------------------g-~~~~~~~~Q~GV~RtNCiDCLDRTNvvQ~ 405 (505)
T 3lwt_X 370 KVIDSN-------------------------------------------G-NTVEIVNEQHSVVRTNCMDCLDRTNVVQS 405 (505)
T ss_dssp EEECTT-------------------------------------------S-CEEEEEECCCEEEEEETTSCHHHHHHHHH
T ss_pred eeccCC-------------------------------------------C-CccceeeccceEEEEecccccccchHHHH
Confidence 632210 0 01357889999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCC-CCCCchHHHHHHHHHHHhhhHhHhhhcCCccccceeeeeccccccccchHHHHHHHHH
Q 006853 496 AYGVVALGLQLKTLGLLKSPN-IGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQR 574 (628)
Q Consensus 496 ~i~~~~L~~qL~~lgi~~~~~-~~~~~~~~~~~~~lw~~~GD~iS~qYaGT~Alk~~~t~r~gk~~~~~~~~D~~~S~~R 574 (628)
+||+.+|+.||+.||+...+. ++.++++...|++||+||||+||+|||||+|+|++|| |+|||+.+|+++|+++|++|
T Consensus 406 ~i~~~~L~~qL~~lgi~~~~~~~~~~~~~~~~f~~lWadnGD~iS~qYaGT~Alkt~~t-R~gk~~~~g~l~D~~~S~~R 484 (505)
T 3lwt_X 406 VLAQWVLQKEFESADVVATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFT-RTGKRTRLGAFNDFLNSASR 484 (505)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCCGGGCHHHHHHHHHHHHHHHHHHTTTCCCCC----------------------------
T ss_pred HHHHHHHHHHHHHcCCCCCccccccCHHHHHHHHHHHHHhhHHHHHHhcCCccccCcee-eceeechhhhHHHHHHhHhh
Confidence 999999999999999987654 4567889999999999999999999999999999998 89999999999999999999
Q ss_pred HHhhccCChhhHHHHHHHhcC
Q 006853 575 YYSNTYVDAEKQNAINVFLGH 595 (628)
Q Consensus 575 yy~NnF~D~~kQ~aidL~LG~ 595 (628)
||+|||.|+.||+|||||||+
T Consensus 485 yy~NnF~D~~rQ~aidl~LGn 505 (505)
T 3lwt_X 485 YYQNNWTDGPRQDSYDLFLGG 505 (505)
T ss_dssp ---------------------
T ss_pred eeecccCcHHHHHHHHHHcCC
Confidence 999999999999999999996
No 2
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=24.38 E-value=1.8e+02 Score=27.31 Aligned_cols=100 Identities=15% Similarity=0.214 Sum_probs=58.4
Q ss_pred cCccchh-----hhHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHH---HHHHHhhhHhHhhhcCCccccceeee
Q 006853 483 CIDCLDR-----TNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLM---GIYETMGDTLALQYGGSAAHNKIFCE 554 (628)
Q Consensus 483 ClDCLDR-----TNv~Q~~i~~~~L~~qL~~lgi~~~~~~~~~~~~~~~~~---~lw~~~GD~iS~qYaGT~Alk~~~t~ 554 (628)
|+|-|.. .++-+-+++...| |. ...+....+.++...++ +.|....-.....||+..+....+-.
T Consensus 93 Cl~iL~~~W~p~~~i~~vL~~i~~l---l~----~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~~~~~~ee 165 (201)
T 3k9o_A 93 CLDILKDQWAAAMTLRTVLLSLQAL---LA----AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTK 165 (201)
T ss_dssp CCGGGTTTCCTTCCHHHHHHHHHHH---HH----SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_pred eCcccccCCCCCCCHHHHHHHHHHH---hc----CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccccccchhHH
Confidence 8888842 2444444433322 21 22333445566666664 56777788888999998765544433
Q ss_pred eccccccccchHHHHHHHHHHHhhccCChhhHHHHHHHhc
Q 006853 555 RRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLG 594 (628)
Q Consensus 555 r~gk~~~~~~~~D~~~S~~Ryy~NnF~D~~kQ~aidL~LG 594 (628)
+..+...+|..++....+-+.. ++.-..|++.+++
T Consensus 166 kV~~l~~MGf~~~~a~~AL~~~-----~wd~~~A~e~L~~ 200 (201)
T 3k9o_A 166 KIENLCAMGFDRNAVIVALSSK-----SWDVETATELLLS 200 (201)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHT-----TTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHc-----CCCHHHHHHHHhc
Confidence 4455556677677666555544 3456677777775
No 3
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=16.65 E-value=2.9e+02 Score=27.11 Aligned_cols=76 Identities=13% Similarity=0.167 Sum_probs=45.7
Q ss_pred CCCCCCchHHHHHH---HHHHHhhhHhHhhhcCCccccceeeeeccccccccchHHHHHHHHHHHhhccCChhhHHHHHH
Q 006853 515 PNIGLDNPLAKDLM---GIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINV 591 (628)
Q Consensus 515 ~~~~~~~~~~~~~~---~lw~~~GD~iS~qYaGT~Alk~~~t~r~gk~~~~~~~~D~~~S~~Ryy~NnF~D~~kQ~aidL 591 (628)
++...+.++...++ +.|....-.....||+.......+..+..+..-+|.-+|....+-+.. ++....|++.
T Consensus 175 p~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~~~~~~~~~v~~l~~mgf~~~~~~~al~~~-----nWd~~~A~e~ 249 (253)
T 3e46_A 175 PDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAAGFDRNAVIVALSSK-----SWDVETATEL 249 (253)
T ss_dssp TTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSCCCHHHHHHHHHHHHTTCCHHHHHHHHHHT-----TTCHHHHHHH
T ss_pred CCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHcCCCHHHHHHHHHHc-----CCCHHHHHHH
Confidence 33445566666654 567777778888999987654444333344445565555555433332 5567778887
Q ss_pred HhcC
Q 006853 592 FLGH 595 (628)
Q Consensus 592 ~LG~ 595 (628)
++|+
T Consensus 250 L~~~ 253 (253)
T 3e46_A 250 LLSN 253 (253)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 7763
No 4
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=10.91 E-value=1.9e+02 Score=29.71 Aligned_cols=109 Identities=14% Similarity=0.167 Sum_probs=52.7
Q ss_pred EEecCcceeeeecCCCCCcccceEEcCCCCchHHHHHHHHHHHHHhCCcEEEEecccCC----CC-C-------cccchH
Q 006853 291 QVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTN----EK-K-------PRETIL 358 (628)
Q Consensus 291 QiRGSVPlfW~Q~~~~l~~kp~i~~~~~d~~~~a~~~HF~~L~~~YG~pv~vvNLl~~~----~~-k-------~~E~~L 358 (628)
.+||-..++=+|.|..+...+ . ..+...+++..|+..+..||+..|..-+.++.- +. + -.|.-+
T Consensus 80 ~vrGHtLvWh~q~P~W~~~~~---~-~~~~l~~~~~~~I~~v~~rY~g~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i 155 (335)
T 4f8x_A 80 KVRCHNLVWASQVSDFVTSKT---W-TAKELTAVMKNHIFKTVQHFGRRCYSWDVVNEALNGDGTFSSSVWYDTIGEEYF 155 (335)
T ss_dssp EEEEEEEECSSSCCHHHHTSC---C-CHHHHHHHHHHHHHHHHHHHGGGCSEEEEEESCBCTTSSBCCCHHHHHHCTHHH
T ss_pred EEEEeeecccccCcHHHhcCC---C-CHHHHHHHHHHHHHHHHHHhCCCceEEEEecCccCCCCccccCchhhhcCHHHH
Confidence 468875443345443322110 1 123346788999999999997655543333321 10 0 113345
Q ss_pred HHHHHHHHHHHhhcCCCCCCeeEEEeecccccc--ccccHHHHHHHHHH
Q 006853 359 RAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR--KAINALQILGRAGA 405 (628)
Q Consensus 359 ~~~f~~~v~~ln~~l~~~~~i~y~~fDfh~~~k--k~~n~l~~l~~~~~ 405 (628)
..+|+.|=+.+++...+.-++-|. ||.-+.- |...++.++..+..
T Consensus 156 ~~aF~~Ar~a~~~~~dP~a~L~~N--DYn~e~~~~k~~~~~~lv~~l~~ 202 (335)
T 4f8x_A 156 YLAFKYAQEALAQIGANDVKLYYN--DYGIENPGTKSTAVLQLVSNLRK 202 (335)
T ss_dssp HHHHHHHHHHHHHTTCTTSEEEEE--ESSCSSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccCCCCcEEEEe--cccccCCcHhHHHHHHHHHHHHH
Confidence 566666655444322333344444 5554421 33334445544433
No 5
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=10.90 E-value=1.2e+02 Score=30.54 Aligned_cols=51 Identities=22% Similarity=0.393 Sum_probs=30.3
Q ss_pred EEecCcceeeeecCCCCCcccceEEcCCCCchHHHHHHHHHHHHHhCCcEEEEecc
Q 006853 291 QVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLI 346 (628)
Q Consensus 291 QiRGSVPlfW~Q~~~~l~~kp~i~~~~~d~~~~a~~~HF~~L~~~YG~pv~vvNLl 346 (628)
.+||-.|++=+|.|..+...+ ..+...+++.+|+..+.+||+..|..-..+
T Consensus 78 ~v~ghtlvW~~q~P~W~~~~~-----~~~~~~~~~~~~i~~v~~rY~g~v~~Wdv~ 128 (303)
T 1ta3_B 78 KVRGHTLVWHSQLPSWVSSIG-----DANTLRSVMTNHINEVVGRYKGKIMHWDVV 128 (303)
T ss_dssp EEEEEEEECSSSCCHHHHTCC-----CHHHHHHHHHHHHHHHHHHTTTSCSEEEEE
T ss_pred EEEEeeccccCCCChhhhcCC-----CHHHHHHHHHHHHHHHHHhcCCcceEEEee
Confidence 478888773344443322110 112235788999999999997655444443
No 6
>3r45_C Holliday junction recognition protein; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=10.85 E-value=1.3e+02 Score=23.80 Aligned_cols=19 Identities=16% Similarity=0.405 Sum_probs=16.3
Q ss_pred chHHHHHHHHHHHHHhCCc
Q 006853 321 KYEATRLHFENLAKRYGNP 339 (628)
Q Consensus 321 ~~~a~~~HF~~L~~~YG~p 339 (628)
+-.-|++|+.+|+++|+.|
T Consensus 26 sr~RFQ~~Mq~lieKYn~P 44 (81)
T 3r45_C 26 SRRRFQRRMQRLIEKYNQP 44 (81)
T ss_dssp HHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 4567999999999999876
No 7
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=9.82 E-value=1.2e+02 Score=30.44 Aligned_cols=50 Identities=16% Similarity=0.280 Sum_probs=29.6
Q ss_pred EecCcceeeeecCCCCCcccceEEcCCCCchHHHHHHHHHHHHHhCCcEEEEeccc
Q 006853 292 VRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIK 347 (628)
Q Consensus 292 iRGSVPlfW~Q~~~~l~~kp~i~~~~~d~~~~a~~~HF~~L~~~YG~pv~vvNLl~ 347 (628)
+||-.+++.+|.+..+.. + ..+...+++.+|...+.+||+..|.....++
T Consensus 77 v~ghtl~W~~~~P~W~~~-----~-~~~~~~~~~~~~i~~v~~ry~g~v~~WdV~N 126 (315)
T 3cui_A 77 LYGHTLVWHSQLPDWAKN-----L-NGSAFESAMVNHVTKVADHFEGKVASWDVVN 126 (315)
T ss_dssp EEEEEEEESSSCCHHHHT-----C-CHHHHHHHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred EEEEeeecCCCCCHHHhc-----C-CHHHHHHHHHHHHHHHHHHcCCceEEEEeec
Confidence 577666544454322210 0 1234567889999999999976555444443
No 8
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=9.47 E-value=2.5e+02 Score=28.81 Aligned_cols=25 Identities=16% Similarity=0.433 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHhCCcEEEEecc
Q 006853 322 YEATRLHFENLAKRYGNPIIVLNLI 346 (628)
Q Consensus 322 ~~a~~~HF~~L~~~YG~pv~vvNLl 346 (628)
..++.+|+..+.+||+..|...+.+
T Consensus 123 ~~~~~~~I~~v~~rY~g~v~~wdv~ 147 (356)
T 2uwf_A 123 LERMENHIKTVVERYKDDVTSWDVV 147 (356)
T ss_dssp HHHHHHHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHcCCcceEEEee
Confidence 4578899999999997555444433
No 9
>1nyc_A Staphostatin B, cysteine protease inhibitor; SSPC, hydrolase inhibitor; 1.40A {Staphylococcus aureus subsp} SCOP: b.61.2.2 PDB: 1pxv_C 1y4h_C 1qwx_A
Probab=7.11 E-value=89 Score=25.64 Aligned_cols=17 Identities=35% Similarity=0.692 Sum_probs=13.7
Q ss_pred hhHHHHHHHhcCcCCCC
Q 006853 584 EKQNAINVFLGHFQPQQ 600 (628)
Q Consensus 584 ~kQ~aidL~LG~~~~~~ 600 (628)
.+|+.|+||.|++....
T Consensus 21 ~~q~~i~lfignw~n~~ 37 (111)
T 1nyc_A 21 LEQTNINLFIGNWSNHQ 37 (111)
T ss_dssp HHHHHHHTTCEEEEETT
T ss_pred cccceEEEEEeccCChh
Confidence 47999999999986433
No 10
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=6.24 E-value=3.9e+02 Score=27.72 Aligned_cols=27 Identities=15% Similarity=0.372 Sum_probs=19.7
Q ss_pred chHHHHHHHHHHHHHhCCcEEEEeccc
Q 006853 321 KYEATRLHFENLAKRYGNPIIVLNLIK 347 (628)
Q Consensus 321 ~~~a~~~HF~~L~~~YG~pv~vvNLl~ 347 (628)
...++.+|+..+.+||+..|...+.++
T Consensus 132 ~~~~~~~~I~~v~~rY~g~i~~wdV~N 158 (379)
T 1r85_A 132 LLKRLETHIKTIVERYKDDIKYWDVVN 158 (379)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEeec
Confidence 345788999999999976565545443
Done!