Query 006853
Match_columns 628
No_of_seqs 217 out of 825
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 10:42:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006853.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006853hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1va4a_ c.69.1.12 (A:) Arylest 15.4 53 0.0039 27.9 3.8 57 287-348 1-57 (271)
2 d2bcjq1 a.66.1.1 (Q:67-183) Tr 13.2 1.3E+02 0.0094 23.6 5.4 18 519-536 58-75 (117)
3 d1ta3b_ c.1.8.3 (B:) Xylanase 12.8 42 0.003 31.2 2.3 25 322-346 102-126 (301)
4 d1tada1 a.66.1.1 (A:57-177) Tr 12.5 1.4E+02 0.011 23.4 5.5 43 490-535 15-75 (121)
5 d1ur1a_ c.1.8.3 (A:) Xylanase 12.0 67 0.0049 30.6 3.7 27 321-347 105-131 (350)
6 d1vf6c_ a.194.1.1 (C:) Maguk p 9.4 1.6E+02 0.012 19.5 3.7 31 565-596 5-35 (51)
7 d1n82a_ c.1.8.3 (A:) Xylanase 8.9 43 0.0031 31.4 0.8 26 321-346 106-131 (330)
8 d2cq2a1 d.58.7.1 (A:25-125) Al 8.1 2E+02 0.015 21.5 4.7 37 312-349 20-56 (101)
9 d1cipa1 a.66.1.1 (A:61-181) Tr 8.1 2.4E+02 0.017 22.0 5.3 20 490-512 15-34 (121)
10 d2z06a1 d.159.1.10 (A:1-252) H 7.6 1.8E+02 0.013 26.3 4.6 46 337-391 104-149 (252)
No 1
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=15.39 E-value=53 Score=27.90 Aligned_cols=57 Identities=19% Similarity=0.180 Sum_probs=35.1
Q ss_pred EEEEEEecCcceeeeecCCCCCcccceEEcCCCCchHHHHHHHHHHHHHhCCcEEEEecccC
Q 006853 287 SSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKT 348 (628)
Q Consensus 287 ~SfVQiRGSVPlfW~Q~~~~l~~kp~i~~~~~d~~~~a~~~HF~~L~~~YG~pv~vvNLl~~ 348 (628)
+|||.+.| +.|+|...+. .+|-+.+.....+...+..-.+.|.++ |-.|+++++-..
T Consensus 1 s~f~~~dG-~~l~y~~~G~---g~~vv~lHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~ 57 (271)
T d1va4a_ 1 STFVAKDG-TQIYFKDWGS---GKPVLFSHGWLLDADMWEYQMEYLSSR-GYRTIAFDRRGF 57 (271)
T ss_dssp CEEECTTS-CEEEEEEESS---SSEEEEECCTTCCGGGGHHHHHHHHTT-TCEEEEECCTTS
T ss_pred CEEEeECC-eEEEEEEEcC---CCeEEEECCCCCCHHHHHHHHHHHHhC-CCEEEEEecccc
Confidence 47888888 9999998763 345444444333444444444555544 334888998764
No 2
>d2bcjq1 a.66.1.1 (Q:67-183) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.18 E-value=1.3e+02 Score=23.60 Aligned_cols=18 Identities=17% Similarity=0.490 Sum_probs=12.4
Q ss_pred CCchHHHHHHHHHHHhhh
Q 006853 519 LDNPLAKDLMGIYETMGD 536 (628)
Q Consensus 519 ~~~~~~~~~~~lw~~~GD 536 (628)
+..++...++.+|.|.|=
T Consensus 58 ~~~~~~~~i~~LW~D~~i 75 (117)
T d2bcjq1 58 FENPYVDAIKSLWNDPGI 75 (117)
T ss_dssp CCHHHHHHHHHHHHSHHH
T ss_pred cCHHHHHHHHHHHcCHHH
Confidence 345677788888876553
No 3
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]}
Probab=12.76 E-value=42 Score=31.24 Aligned_cols=25 Identities=16% Similarity=0.353 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHhCCcEEEEecc
Q 006853 322 YEATRLHFENLAKRYGNPIIVLNLI 346 (628)
Q Consensus 322 ~~a~~~HF~~L~~~YG~pv~vvNLl 346 (628)
...+.+|+..+..||+..|..-+.+
T Consensus 102 ~~~~~~~I~~v~~rY~g~i~~WDVv 126 (301)
T d1ta3b_ 102 RSVMTNHINEVVGRYKGKIMHWDVV 126 (301)
T ss_dssp HHHHHHHHHHHHHHTTTSCSEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcceEEee
Confidence 4668899999999997666533443
No 4
>d1tada1 a.66.1.1 (A:57-177) Transducin (alpha subunit), insertion domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=12.47 E-value=1.4e+02 Score=23.43 Aligned_cols=43 Identities=14% Similarity=0.195 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCCC-C-----------------CCCCCchHHHHHHHHHHHhh
Q 006853 490 TNVAQYAYGVVALGLQLKTLGLLKS-P-----------------NIGLDNPLAKDLMGIYETMG 535 (628)
Q Consensus 490 TNv~Q~~i~~~~L~~qL~~lgi~~~-~-----------------~~~~~~~~~~~~~~lw~~~G 535 (628)
.|++|+| .+|-..+..||+-.. + .......+...++.+|.|.|
T Consensus 15 ~Nii~~m---~~li~a~~~l~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~i~~LW~D~~ 75 (121)
T d1tada1 15 GNTLQSI---LAIVRAMTTLNIQYGDSARQDDARKLMHMADTIEEGTMPKEMSDIIQRLWKDSG 75 (121)
T ss_dssp HHHHHHH---HHHHHHHHHTTCCCSSTTHHHHHHHHHHHHHHSCTTCCCHHHHHHHHHHHHCHH
T ss_pred HHHHHHH---HHHHHHHHHcCCCCCCchHHHHHHHHHHhhccccCCCCCHHHHHHHHHHhCCHH
Confidence 4777765 344456678886532 1 11233456677777887766
No 5
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]}
Probab=12.05 E-value=67 Score=30.57 Aligned_cols=27 Identities=19% Similarity=0.337 Sum_probs=19.2
Q ss_pred chHHHHHHHHHHHHHhCCcEEEEeccc
Q 006853 321 KYEATRLHFENLAKRYGNPIIVLNLIK 347 (628)
Q Consensus 321 ~~~a~~~HF~~L~~~YG~pv~vvNLl~ 347 (628)
-...+..|+..+..+|+..|..-+.++
T Consensus 105 l~~~~~~~I~~v~~ry~g~i~~WDVvN 131 (350)
T d1ur1a_ 105 LQKKMEEHITTLAGRYKGKLAAWDVVN 131 (350)
T ss_dssp HHHHHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEEec
Confidence 345688999999999976664444443
No 6
>d1vf6c_ a.194.1.1 (C:) Maguk p55 subfamily member 5, Patj {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.40 E-value=1.6e+02 Score=19.46 Aligned_cols=31 Identities=23% Similarity=0.425 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHhhccCChhhHHHHHHHhcCc
Q 006853 565 SQEFLRTLQRYYSNTYVDAEKQNAINVFLGHF 596 (628)
Q Consensus 565 ~~D~~~S~~Ryy~NnF~D~~kQ~aidL~LG~~ 596 (628)
..|.+.|++ -...+..|..-|+-|.|+|-..
T Consensus 5 ~edl~~slK-~iqh~LvDsQSQeDi~l~lqLv 35 (51)
T d1vf6c_ 5 VEDLFSSLK-HIQHTLVDSQSQEDISLLLQLV 35 (51)
T ss_dssp HHHHHHHHH-HHHTTCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhhcccchHHHHHHHHHHH
Confidence 357777776 5678899999999999998543
No 7
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]}
Probab=8.92 E-value=43 Score=31.39 Aligned_cols=26 Identities=23% Similarity=0.457 Sum_probs=19.3
Q ss_pred chHHHHHHHHHHHHHhCCcEEEEecc
Q 006853 321 KYEATRLHFENLAKRYGNPIIVLNLI 346 (628)
Q Consensus 321 ~~~a~~~HF~~L~~~YG~pv~vvNLl 346 (628)
-..++.+|...+.++|+..|..-+.+
T Consensus 106 ~~~~~~~~i~~v~~ry~g~v~~WdV~ 131 (330)
T d1n82a_ 106 LLERMKCHISTVVRRYKGKIYCWDVI 131 (330)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCceeEEEe
Confidence 45678999999999997666444443
No 8
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.15 E-value=2e+02 Score=21.50 Aligned_cols=37 Identities=8% Similarity=0.141 Sum_probs=23.3
Q ss_pred ceEEcCCCCchHHHHHHHHHHHHHhCCcEEEEecccCC
Q 006853 312 DIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTN 349 (628)
Q Consensus 312 ~i~~~~~d~~~~a~~~HF~~L~~~YG~pv~vvNLl~~~ 349 (628)
.+.+.........+...+.++.++||. |.-+.++..+
T Consensus 20 ~l~V~ng~L~~~vte~~L~~~F~~~G~-i~~i~~~~~k 56 (101)
T d2cq2a1 20 SLVVANGGLGNGVSRNQLLPVLEKCGL-VDALLMPPNK 56 (101)
T ss_dssp EEEEETCTGGGTCCHHHHHHHHHHHSC-EEEEECCTTC
T ss_pred eEEEECCCCCCCCCHHHHHHHHHhhCc-ccEEeeccCc
Confidence 344433233344556677788889996 7777877643
No 9
>d1cipa1 a.66.1.1 (A:61-181) Transducin (alpha subunit), insertion domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=8.14 E-value=2.4e+02 Score=21.96 Aligned_cols=20 Identities=20% Similarity=0.154 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCC
Q 006853 490 TNVAQYAYGVVALGLQLKTLGLL 512 (628)
Q Consensus 490 TNv~Q~~i~~~~L~~qL~~lgi~ 512 (628)
.|+++++ .+|-..+..+|+-
T Consensus 15 ~Ni~~~~---~~ll~a~~~l~i~ 34 (121)
T d1cipa1 15 SNTIQSI---IAIIRAMGRLKID 34 (121)
T ss_dssp HHHHHHH---HHHHHHHHHHTCC
T ss_pred HHHHHHH---HHHHHHHHHhCCC
Confidence 4777655 3444556677763
No 10
>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]}
Probab=7.58 E-value=1.8e+02 Score=26.33 Aligned_cols=46 Identities=4% Similarity=0.278 Sum_probs=27.1
Q ss_pred CCcEEEEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeecccccc
Q 006853 337 GNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR 391 (628)
Q Consensus 337 G~pv~vvNLl~~~~~k~~E~~L~~~f~~~v~~ln~~l~~~~~i~y~~fDfh~~~k 391 (628)
|.+|.|+||+.+--..+-+.+- ++..+. +.+ .+..++-.|||+|+-
T Consensus 104 g~ki~ViNl~Gr~fm~~~d~PF-~~~d~~---~~~-----~~~~~i~VDfHaEaT 149 (252)
T d2z06a1 104 GESLLFVQVMGRIFMDPLDDPF-RALDRL---LEE-----EKADYVLVEVHAEAT 149 (252)
T ss_dssp TEEEEEEEEECCTTSCCCCCHH-HHHHHH---HHH-----CCCSEEEEEEECSCH
T ss_pred CceEEEEEecccccCCCCCCHH-HHHHHH---Hhh-----cCccEEEEEcccchh
Confidence 3468889999865444444433 222222 222 245567789999984
Done!