Query 006861
Match_columns 628
No_of_seqs 193 out of 881
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 10:54:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006861.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006861hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zzr_A Unsaturated glucuronyl 99.0 1.4E-08 4.6E-13 109.5 21.7 236 182-448 70-341 (397)
2 3k7x_A LIN0763 protein; Q92DQ0 99.0 4.4E-09 1.5E-13 111.7 17.3 227 182-446 48-295 (349)
3 2ahf_A Unsaturated glucuronyl 99.0 1.4E-08 4.7E-13 108.9 21.1 235 182-447 44-315 (377)
4 2gz6_A N-acetyl-D-glucosamine 98.9 7.1E-08 2.4E-12 103.0 19.0 276 182-468 55-355 (388)
5 3pmm_A Putative cytoplasmic pr 98.8 1.5E-07 5.1E-12 101.2 17.4 231 182-459 70-337 (382)
6 3gt5_A N-acetylglucosamine 2-e 98.5 2.4E-06 8.1E-11 92.2 18.1 249 182-446 54-339 (402)
7 3k7x_A LIN0763 protein; Q92DQ0 98.5 8E-07 2.7E-11 94.3 14.1 184 245-452 46-247 (349)
8 1nc5_A Hypothetical protein YT 98.5 1.2E-06 4.2E-11 93.6 14.4 232 182-452 43-313 (373)
9 2gz6_A N-acetyl-D-glucosamine 98.5 1.2E-06 4E-11 93.6 13.8 193 182-383 117-337 (388)
10 3pmm_A Putative cytoplasmic pr 98.3 7.4E-06 2.5E-10 87.9 15.3 249 198-470 24-289 (382)
11 3k11_A Putative glycosyl hydro 98.3 1.3E-05 4.4E-10 87.5 16.5 300 116-455 20-366 (445)
12 2ahf_A Unsaturated glucuronyl 98.3 2.2E-05 7.5E-10 84.0 18.0 239 180-435 87-367 (377)
13 2zbl_A Putative isomerase; N-a 98.2 2.6E-05 8.8E-10 84.6 17.2 255 182-452 53-350 (421)
14 2zzr_A Unsaturated glucuronyl 98.1 3.4E-05 1.2E-09 83.0 15.7 231 189-435 123-392 (397)
15 3gt5_A N-acetylglucosamine 2-e 98.1 3E-05 1E-09 83.5 15.4 192 183-383 116-343 (402)
16 1fp3_A N-acyl-D-glucosamine 2- 97.9 0.00014 4.8E-09 77.9 16.4 271 182-467 58-364 (402)
17 1nc5_A Hypothetical protein YT 97.7 0.00022 7.7E-09 76.0 13.7 166 267-456 13-182 (373)
18 2zbl_A Putative isomerase; N-a 97.7 0.00036 1.2E-08 75.5 13.9 194 183-383 114-349 (421)
19 1fp3_A N-acyl-D-glucosamine 2- 97.5 0.00064 2.2E-08 72.7 13.4 187 182-384 124-348 (402)
20 3k11_A Putative glycosyl hydro 97.3 0.0018 6.2E-08 70.5 13.4 212 247-470 83-320 (445)
21 3h7l_A Endoglucanase; dehydrog 97.1 0.023 7.8E-07 63.8 20.1 238 199-453 190-484 (586)
22 1nxc_A Mannosyl-oligosaccharid 96.9 0.006 2.1E-07 66.9 12.7 198 251-454 110-344 (478)
23 3e6u_A LANC-like protein 1; al 96.6 0.012 4.2E-07 63.4 12.0 188 184-384 169-369 (411)
24 1ks8_A Endo-B-1,4-glucanase; c 95.9 0.76 2.6E-05 49.7 21.6 227 198-453 89-341 (433)
25 1dl2_A Class I alpha-1,2-manno 95.8 0.034 1.1E-06 61.5 10.5 243 185-448 54-346 (511)
26 1nxc_A Mannosyl-oligosaccharid 95.5 0.025 8.5E-07 62.1 8.3 197 191-397 184-414 (478)
27 1x9d_A Endoplasmic reticulum m 95.5 0.083 2.8E-06 58.6 12.3 195 193-398 248-482 (538)
28 1x9d_A Endoplasmic reticulum m 95.5 0.1 3.5E-06 57.9 12.9 187 251-445 174-391 (538)
29 3e6u_A LANC-like protein 1; al 95.4 0.051 1.7E-06 58.5 10.0 123 189-330 240-365 (411)
30 2ri9_A Mannosyl-oligosaccharid 95.3 0.11 3.8E-06 56.9 12.6 195 193-397 175-416 (475)
31 2ri9_A Mannosyl-oligosaccharid 95.2 0.16 5.4E-06 55.7 13.5 189 251-446 92-323 (475)
32 1ia6_A Cellulase CEL9M; cellul 95.1 1.7 5.7E-05 47.1 21.0 228 198-453 91-343 (441)
33 1hcu_A Alpha-1,2-mannosidase; 95.1 0.13 4.6E-06 56.6 12.4 189 251-446 105-336 (503)
34 1dl2_A Class I alpha-1,2-manno 94.7 0.14 4.8E-06 56.5 11.2 192 193-392 186-434 (511)
35 1hcu_A Alpha-1,2-mannosidase; 94.5 0.15 5E-06 56.3 10.7 195 193-397 189-435 (503)
36 2g0d_A Nisin biosynthesis prot 94.3 0.82 2.8E-05 48.5 16.1 179 189-377 143-352 (409)
37 1g87_A Endocellulase 9G; endog 93.6 3.3 0.00011 46.8 19.8 175 198-383 90-290 (614)
38 2xfg_A Endoglucanase 1; hydrol 93.5 4.4 0.00015 44.2 20.0 174 199-383 112-313 (466)
39 1tf4_A T. fusca endo/EXO-cellu 90.8 7.7 0.00026 43.7 18.3 177 198-383 90-292 (605)
40 3h7l_A Endoglucanase; dehydrog 90.2 1 3.4E-05 50.5 10.2 188 183-391 253-494 (586)
41 2g0d_A Nisin biosynthesis prot 88.9 2 6.8E-05 45.5 11.1 127 188-328 214-353 (409)
42 3gzk_A Cellulase; fold from GH 87.9 2.3 8E-05 47.2 11.1 125 199-329 188-333 (537)
43 1r76_A Pectate lyase; A-helica 86.4 13 0.00044 39.7 15.1 155 63-228 19-198 (408)
44 2v8i_A Pectate lyase; periplas 85.7 1.8 6.1E-05 46.7 8.0 73 251-328 378-454 (543)
45 1ut9_A Cellulose 1,4-beta-cell 84.1 6.2 0.00021 44.4 12.2 125 199-328 227-380 (609)
46 1clc_A Endoglucanase CELD; EC: 83.9 2.4 8.2E-05 48.1 8.8 123 199-329 232-377 (639)
47 1ia6_A Cellulase CEL9M; cellul 83.0 25 0.00085 37.9 16.0 188 182-391 155-353 (441)
48 2yik_A Endoglucanase; hydrolas 82.4 6.5 0.00022 44.3 11.4 75 252-329 223-306 (611)
49 2v8i_A Pectate lyase; periplas 81.2 4.9 0.00017 43.4 9.1 87 182-281 375-461 (543)
50 2xfg_A Endoglucanase 1; hydrol 72.1 12 0.00042 40.6 9.5 190 182-391 174-386 (466)
51 2w87_A Esterase D, XYL-CBM35; 69.4 16 0.00055 32.7 8.2 38 551-589 40-78 (139)
52 1ks8_A Endo-B-1,4-glucanase; c 65.5 19 0.00066 38.6 9.3 120 183-327 213-333 (433)
53 2w3j_A Carbohydrate binding mo 63.0 28 0.00095 31.3 8.6 38 551-589 40-78 (145)
54 1g87_A Endocellulase 9G; endog 62.1 30 0.001 38.9 10.3 188 182-391 153-363 (614)
55 1tf4_A T. fusca endo/EXO-cellu 59.6 1.7E+02 0.0057 32.7 15.9 191 182-391 153-366 (605)
56 1gxm_A Pectate lyase; mechanis 52.2 43 0.0015 34.7 8.7 92 182-282 76-182 (332)
57 2w47_A Lipolytic enzyme, G-D-S 44.0 67 0.0023 28.5 7.8 37 551-588 41-78 (144)
58 2vzp_A Aocbm35, EXO-beta-D-glu 38.9 1.4E+02 0.0048 25.6 8.9 38 551-589 40-78 (127)
59 3gzk_A Cellulase; fold from GH 32.6 1.5E+02 0.0051 32.6 9.7 75 359-445 252-332 (537)
60 2k6p_A Uncharacterized protein 26.5 41 0.0014 27.5 3.0 32 581-621 27-58 (92)
61 1i8d_A Riboflavin synthase; ri 24.1 1.4E+02 0.0048 28.8 6.6 55 564-618 21-90 (213)
62 1dm9_A Hypothetical 15.5 KD pr 23.9 61 0.0021 28.8 3.8 32 581-621 35-66 (133)
63 2gjh_A Designed protein; oblig 22.9 21 0.00071 26.3 0.4 19 595-614 30-48 (62)
64 1w6k_A Lanosterol synthase; cy 22.2 2.2E+02 0.0075 32.5 9.0 111 168-282 440-571 (732)
65 2wz8_A Cellulosome protein doc 22.1 1.2E+02 0.0043 27.4 5.6 9 580-588 88-96 (156)
66 3a35_A Lumazine protein, LUMP; 21.5 1.3E+02 0.0043 28.6 5.7 53 565-618 22-89 (190)
67 4aw7_A GH86A beta-porphyranase 21.5 1.9E+02 0.0066 32.1 7.9 41 551-593 490-534 (591)
No 1
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=99.04 E-value=1.4e-08 Score=109.48 Aligned_cols=236 Identities=12% Similarity=0.035 Sum_probs=141.9
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
.|-|...+.++|..|+|+++++.++.+.+.|.+... ..=..+ .++-.. ++...+...|+.
T Consensus 70 ~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~--~~~~~~-------------~HD~GF-----~~~~s~~~~y~l 129 (397)
T 2zzr_A 70 NGFWTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRIN--NRIALD-------------HHDLGF-----LYTPSCTAEYRI 129 (397)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--TTCSCC-------------SSTHHH-----HHTTTHHHHHHH
T ss_pred cchHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhh--hcccCC-------------CCCchH-----HHHHHHHHHHHH
Confidence 588889999999999999999999999988876544 110011 111111 122334568999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhhh---hhcccc----ccccccccccccchH-HHHHHHHHHcCCHHHHHHHhhcc----
Q 006861 262 ADNAEALRMTTWMVEYFYNRVQNV---IKKYSI----ERHWQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLFD---- 329 (628)
Q Consensus 262 tG~~kaL~ia~~~ad~~~~~~~~~---~~~~~~----~~~~~~l~~e~GGm~-~~L~~LY~~TGd~ryL~lA~~f~---- 329 (628)
|||+++++++...|++++.++.+. ++.+.. ..++.++++ -|| .+|++.+++|||++|++.|..-.
T Consensus 130 tg~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~~~~~~~~iID~---~mni~~L~~A~~~~gd~~y~~~A~~ha~~~l 206 (397)
T 2zzr_A 130 NGDVKALEATIKAADKLMERYQEKGGFIQAWGELGYKEHYRLIIDC---LLNIQLLFFAYEQTGDEKYRQVAVNHFYASA 206 (397)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTTCGGGCEEETTH---HHHTHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHhCcCCCEEEecccCCCCCCCceeech---HhHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999999999998543 222210 001111122 245 68999999999999999997521
Q ss_pred ccccc--chhh--ccCCCCCCC--c---ccCC----------cchhhHHHHHHHHhCChHHHHHHHHHHHHhhhcCceee
Q 006861 330 KPCFL--GLLA--LQADDISGF--H---SNTH----------IPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYAT 390 (628)
Q Consensus 330 ~~~~~--~~~~--~~~d~l~g~--h---anth----------ip~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~y~T 390 (628)
+..+. +.+. ...|+.+|. | .+.. -=.+.|.+..|+.|||++|++.++...+.+.++ . ..
T Consensus 207 ~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~-~-~~ 284 (397)
T 2zzr_A 207 NNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNR-L-PE 284 (397)
T ss_dssp HHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT-C-CT
T ss_pred HhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh-h-HH
Confidence 11110 0000 000111111 0 0111 224588999999999999999999888877753 3 32
Q ss_pred cCCCCCCCCCCCcccccCCCCCccccchHHHHHHHHHHhhhccCC---ch--hHHHHHHHHhh
Q 006861 391 GGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE---IA--YADYYERSLTN 448 (628)
Q Consensus 391 GG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tgd---~~--YaD~~Er~lyN 448 (628)
.|++ .-++..|. ++.......+-.+++.++++ |.+++++ .+ |.+..|+++=.
T Consensus 285 d~~p-ywdt~~~~-~~~~~~D~Sa~aiaA~~Ll~----L~~~~~~~~~~~~~Y~~~A~~~l~~ 341 (397)
T 2zzr_A 285 DKVS-YWDLIFTD-GSGQPRDTSATATAVCGIHE----MLKYLPEVDPDKETYKYAMHTMLRS 341 (397)
T ss_dssp TSCC-BSBTTCCT-TSCCCBCHHHHHHHHHHHHH----HHTTSCTTCTTHHHHHHHHHHHHHH
T ss_pred hCCc-cccCCCCC-CCCCcCCCCHHHHHHHHHHH----HHHhcCccchhhHHHHHHHHHHHHH
Confidence 2221 11122221 22211122334455566665 6666776 77 99999998843
No 2
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=99.03 E-value=4.4e-09 Score=111.73 Aligned_cols=227 Identities=13% Similarity=0.075 Sum_probs=139.6
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCccc-ccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYL-SAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYT 260 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl-~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~ 260 (628)
-++.+.++...|..++|+++++.+.+.++.+... .+|++ +.+ .++. .| +..+++++|+
T Consensus 48 ~a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~----~~~~~~~~~----~DD~-----a~--------~~la~~~aye 106 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNR----NGGTLIHDF----YDDM-----LW--------NALAAYRLYK 106 (349)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH----TTSSSCCSB----HHHH-----HH--------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc----CCCCCCccC----ccHH-----HH--------HHHHHHHHHH
Confidence 3566799999999999999999999988877652 23333 222 1211 11 2246679999
Q ss_pred HcCCHHHHHHHHHHHHHH-HHHhhhhhhccccccccccc-----c-ccccchHHHHHHHHHHcCCHHHHHHHhhccc---
Q 006861 261 YADNAEALRMTTWMVEYF-YNRVQNVIKKYSIERHWQTL-----N-EEAGGMNDVLYKLFCITQDPKHLMLAHLFDK--- 330 (628)
Q Consensus 261 ~tG~~kaL~ia~~~ad~~-~~~~~~~~~~~~~~~~~~~l-----~-~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~--- 330 (628)
.||+++.|++|.++++++ ..++.+...+ + -.|..- + ...+.+..++++||+.|||++|++.|++..+
T Consensus 107 ~t~~~~yL~~A~~l~~~l~~~~wd~~~gG-G--i~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~ 183 (349)
T 3k7x_A 107 ATGKSIYLEDAQLVWQDLVDTGWNDIMGG-G--FAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQT 183 (349)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTBCSGGGS-C--BEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHCCchHHHHHHHHHHHHHHhCCCCCCCC-c--eEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999999999 6666442211 0 112210 0 1122345788999999999999999987421
Q ss_pred ccccchhhccCCCCC----------CCcccCCcchhhHHHHHHHHhCChHHHHHHHHHHHHhhhcCceeecCCCCCCCCC
Q 006861 331 PCFLGLLALQADDIS----------GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWS 400 (628)
Q Consensus 331 ~~~~~~~~~~~d~l~----------g~hanthip~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~y~TGG~g~~E~f~ 400 (628)
..+.++...-.|.+. ..++..+..++.|.+.+|+.|||++|++.++...+.+.+ +.. .+|+=..|.
T Consensus 184 ~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~-~f~-~~gi~~~~~-- 259 (349)
T 3k7x_A 184 KVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLK-ELT-EDGIFKDEG-- 259 (349)
T ss_dssp HHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHE-ETTEECCCC--
T ss_pred hcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-Hhc-cCCcccCCC--
Confidence 122221100011110 123333344567899999999999999999999888763 343 333311110
Q ss_pred CCcccccCCCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHHH
Q 006861 401 DPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 446 (628)
Q Consensus 401 ~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~l 446 (628)
.........-=+++....|.+++++..|.+.+.+.+
T Consensus 260 ----------~~~D~~sFkgi~~r~L~~l~~~~p~~~~~~~l~~sa 295 (349)
T 3k7x_A 260 ----------NGGDEGLFKGIFYRYFTDLIEETANKTYRDFVLNSC 295 (349)
T ss_dssp ----------SSSGGGGHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ----------CCccHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHH
Confidence 001112222234444555667778877888777766
No 3
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=99.03 E-value=1.4e-08 Score=108.88 Aligned_cols=235 Identities=11% Similarity=0.040 Sum_probs=141.7
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
.|-|.-.+.++|..|+|+++++.++.+.+.|.+.-. .. +++ ..++-++. ++..+...|+.
T Consensus 44 ~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~--~~--~~~-----------~~HD~Gf~-----~~~s~~~~y~l 103 (377)
T 2ahf_A 44 DGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLD--RF--ENL-----------DHHNIGFL-----YSLSAKAQWIV 103 (377)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHT--TT--TTC-----------CBSTHHHH-----HHTTHHHHHHH
T ss_pred cchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh--cc--cCC-----------CCCCchHh-----hHHHHHHHHHH
Confidence 588899999999999999999999999888875432 10 110 01221221 23345578999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhhh---hhcccc---cc-c-cccccccccchH-HHHHHHHHHcCCHHHHHHHhhc---c
Q 006861 262 ADNAEALRMTTWMVEYFYNRVQNV---IKKYSI---ER-H-WQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLF---D 329 (628)
Q Consensus 262 tG~~kaL~ia~~~ad~~~~~~~~~---~~~~~~---~~-~-~~~l~~e~GGm~-~~L~~LY~~TGd~ryL~lA~~f---~ 329 (628)
|||+++++++...|++++.++.+. ++.+.. +. . +.++++- || .+|++.+++|||++|++.|..- .
T Consensus 104 tg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~~~~~~iID~m---mni~~L~~A~~~~gd~~y~~~A~~~a~~~ 180 (377)
T 2ahf_A 104 EKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCL---LNLPLLLWAGEQTGDPEYRRVAEAHALKS 180 (377)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTTTTTEEEGGGG---GGHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCCCCceEEechH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999999998743 232221 10 1 1122222 33 6899999999999999999772 1
Q ss_pred cccccch---hh--ccCCCCCCC---------cccC------CcchhhHHHHHHHHhCChHHHHHHHHHHHHhhhcCcee
Q 006861 330 KPCFLGL---LA--LQADDISGF---------HSNT------HIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA 389 (628)
Q Consensus 330 ~~~~~~~---~~--~~~d~l~g~---------hant------hip~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~y~ 389 (628)
-...+.+ +. ...|+.+|. +++. +-=.+.|.+..|+.|+|++|++.++..-+.+.++ . .
T Consensus 181 l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~-~-~ 258 (377)
T 2ahf_A 181 RRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLAR-V-P 258 (377)
T ss_dssp HHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-C-C
T ss_pred HHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHh-h-H
Confidence 1111000 00 000111111 0111 1224588999999999999999999888887753 2 2
Q ss_pred ecCCCCCCCCCCCcccccCCCCCccccchHHHHHHHHHHhhhccC-----CchhHHHHHHHHh
Q 006861 390 TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTK-----EIAYADYYERSLT 447 (628)
Q Consensus 390 TGG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tg-----d~~YaD~~Er~ly 447 (628)
..|+. .-++..+. ++.......+-.+++.++++ |.++++ +.+|.+..|+++=
T Consensus 259 ~d~~p-ywd~~~~~-~~~~~~d~Sa~aiaA~~Ll~----L~~~~~~~~~~~~~Y~~~A~~~l~ 315 (377)
T 2ahf_A 259 EDGVV-YWDFEVPQ-EPSSYRDSSASAITACGLLE----IASQLDESDPERQRFIDAAKTTVT 315 (377)
T ss_dssp TTSSC-BSBTTSCC-CTTSCBCHHHHHHHHHHHHH----HHHTSCTTCHHHHHHHHHHHHHHH
T ss_pred HhCCc-ccccCCCc-cCCCccCCCHHHHHHHHHHH----HHHhcCccccchHHHHHHHHHHHH
Confidence 22211 11111111 22211122334455566666 556665 6789999999883
No 4
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.86 E-value=7.1e-08 Score=103.01 Aligned_cols=276 Identities=9% Similarity=-0.032 Sum_probs=152.7
Q ss_pred hHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHHHhhcCC-cccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHH
Q 006861 182 VGHYLSASALMWAS-THNESLKEKMSAVVSALSACQKEIGS-GYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQY 259 (628)
Q Consensus 182 ~G~~LsalA~~ya~-t~D~~L~~k~d~~Vd~l~~~Q~~~~d-GYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y 259 (628)
-|..+.++|.+|.. ++|+++++.+++.++.|.+.-.. ++ |+..+...+- .....-...|..-.+..|+.++|
T Consensus 55 nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~-~~Gg~~~~~d~dg-----~~~~~~~~~~~~af~i~al~~~y 128 (388)
T 2gz6_A 55 QNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRD-DEGNWYFALTRGG-----EPLVQPYNIFSDCFAAMAFSQYA 128 (388)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBC-TTSCBCSEECTTS-----CBCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCC-----CcccCCcchHHHHHHHHHHHHHH
Confidence 58888999999998 89999999999999999988331 34 4444331100 00000011222333567888999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhhhhhhccccc-cccccccc-c-ccchHHHHHHHHHHcCCHHHHHHHhhccc---ccc
Q 006861 260 TYADNAEALRMTTWMVEYFYNRVQNVIKKYSIE-RHWQTLNE-E-AGGMNDVLYKLFCITQDPKHLMLAHLFDK---PCF 333 (628)
Q Consensus 260 ~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~-~~~~~l~~-e-~GGm~~~L~~LY~~TGd~ryL~lA~~f~~---~~~ 333 (628)
++||++++|+.|.++++++.+.+....+.+... ..+..+.. + ..-+.++|..||++|||++|++.|+...+ ..+
T Consensus 129 ~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~ 208 (388)
T 2gz6_A 129 LASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDF 208 (388)
T ss_dssp HHHCCHHHHHHHHHHHHHHHTC--------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987663211101000 00010000 0 00122578899999999999999876532 112
Q ss_pred cchhh------ccCC--CCCCCcccCCcch--hh---HHHHHHHHhCChHHHHHHHHHHHHhhhcCcee--ecCCCCCCC
Q 006861 334 LGLLA------LQAD--DISGFHSNTHIPI--VI---GSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA--TGGTSVGEF 398 (628)
Q Consensus 334 ~~~~~------~~~d--~l~g~hanthip~--~~---G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~y~--TGG~g~~E~ 398 (628)
..+.. ...+ .+.........|. .+ -....+++|||+.|++.++..++.+.+ +++- +||+-..-.
T Consensus 209 ~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~-~g~d~~~Gg~~~~~~ 287 (388)
T 2gz6_A 209 LDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILN-FAWDNEYGGLYYFMD 287 (388)
T ss_dssp EETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHBCTTTCSBCSCEE
T ss_pred hccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhccCCCCCEEEeec
Confidence 11110 0000 0000000111221 11 134457899999999998887777653 2221 244321111
Q ss_pred C-CCCcccccCCCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHHHhhhhhcc-CCCCCCCcEEEEccC
Q 006861 399 W-SDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGI-QRGTEPGVMIYLLPL 468 (628)
Q Consensus 399 f-~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~lyN~ila~-~~~~d~~~~~Y~~pl 468 (628)
+ +.| +. .+.....-.+...+.+.-+-.+++.|||.+|.+.++++. +-+... .++.+|+-|.+.++-
T Consensus 288 ~~g~~--~~-~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~-~~~~~~~~D~~~G~w~~~l~~~ 355 (388)
T 2gz6_A 288 AAGHP--PQ-QLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMH-DYSWQHFADPEYGEWFGYLNRR 355 (388)
T ss_dssp TTSCC--CS-CTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHBCTTTSSBCCEECTT
T ss_pred CCCCc--cc-cCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCcCCCCCceEEeeCCC
Confidence 1 110 00 000123334666777877888999999999999998864 333222 223355556665543
No 5
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.76 E-value=1.5e-07 Score=101.16 Aligned_cols=231 Identities=13% Similarity=0.092 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
-|.|+.++..+|..|+|+++++.++++++.+.. + +|-+.. . ++ .. ++..++..|+.
T Consensus 70 ~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~--~---~~~~~n-----------~-D~---~~----~~~~l~~lY~~ 125 (382)
T 3pmm_A 70 HGVGLYGIYQYYQQTGDIEMRDIIDRWFADRFA--E---GATTKN-----------V-NT---MA----PFLTLAYRFEE 125 (382)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH--H---CCCCCC-----------T-TT---TT----THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHc--C---CCCcCc-----------c-cc---hH----HHHHHHHHHHH
Confidence 589999999999999999999999999986643 2 222110 0 11 11 22355789999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhhhhh-cccc------ccccccccccccchH-HHHHHHHHHcCCHHHHHHHhh-cc--c
Q 006861 262 ADNAEALRMTTWMVEYFYNRVQNVIK-KYSI------ERHWQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHL-FD--K 330 (628)
Q Consensus 262 tG~~kaL~ia~~~ad~~~~~~~~~~~-~~~~------~~~~~~l~~e~GGm~-~~L~~LY~~TGd~ryL~lA~~-f~--~ 330 (628)
||++++++++...+|++.+++.+... +..- ...+..++.- -|+ ..|+++|++|||++|++.|.+ |. .
T Consensus 126 Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~WiDgl--~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~ 203 (382)
T 3pmm_A 126 TGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDDTL--MMTVLPLAKIGKLLNRPQYVEEATYQFLLHV 203 (382)
T ss_dssp HCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEETTHH--HHTHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEEecch--hhhHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 99999999999999999775532111 1100 0001001111 144 477999999999999998854 31 1
Q ss_pred ccccchhhccCCCCCCCcccCC------cc---------hhhHHHHHHHH-------hCChHHHHHHHHHHHHhhhcCce
Q 006861 331 PCFLGLLALQADDISGFHSNTH------IP---------IVIGSQMRYEV-------TGDQLHKTISMFFMDIVNSSHTY 388 (628)
Q Consensus 331 ~~~~~~~~~~~d~l~g~hanth------ip---------~~~G~a~~Y~~-------TGD~~y~~a~~~~~~~v~~~~~y 388 (628)
...+++. +.+ ..|..++ -+ .+.|.++.|+. ++++.|++..+...+.+.+++-
T Consensus 204 ~~l~D~~----tGl-~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~- 277 (382)
T 3pmm_A 204 QNLMDRE----TGL-WFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQD- 277 (382)
T ss_dssp HHHBCTT----TSC-BCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHccCCC----CCC-eeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCC-
Confidence 1122221 111 1122111 11 24678888987 5566777777777777665543
Q ss_pred eecCCCCCCCCCCCcccccCCCCCccccc----hHHHHHHHHHHhhhccCCchhHHHHHHHHhhhhhccCCCCCC
Q 006861 389 ATGGTSVGEFWSDPKRLASNLDSNTEESC----TTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEP 459 (628)
Q Consensus 389 ~TGG~g~~E~f~~~~~L~~~~~~~~~EtC----as~~~l~~~~~L~~~tgd~~YaD~~Er~lyN~ila~~~~~d~ 459 (628)
.+| .|.. +.+. +.++.||- .++++++..+.=+ + +.+|.+.+||++ +++...+++ ||
T Consensus 278 ~~G------~W~~---~~d~-~~~y~EsSatA~~ay~ll~~~~~g~-l--~~~Y~~~a~ka~-~~l~~~i~~-dG 337 (382)
T 3pmm_A 278 DSG------LWHT---LLDD-PHSYLEASATAGFAYGILKAVRKRY-V--GQHYAGVAEKAI-RGIVQNISP-QG 337 (382)
T ss_dssp TTS------CEES---BTTC-TTSCEEHHHHHHHHHHHHHHHHTTS-S--CGGGHHHHHHHH-HHHHHTBCT-TS
T ss_pred CCC------Chhh---ccCC-CCCCccccHHHHHHHHHHHHHHcCC-C--cHHHHHHHHHHH-HHHHhhCCC-CC
Confidence 233 2321 1111 23455543 3566666555211 1 468999999965 888877653 44
No 6
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.51 E-value=2.4e-06 Score=92.20 Aligned_cols=249 Identities=9% Similarity=0.082 Sum_probs=148.4
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcC-CcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIG-SGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYT 260 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~-dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~ 260 (628)
-|..|.++|.+|..++++++++.+++.++.|.+.-...+ .|+........ .. ..=...|..-.++.|+++ |.
T Consensus 54 n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~-----~~-~~~~~lyd~Af~i~al~~-~~ 126 (402)
T 3gt5_A 54 STRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDR-----VE-DDTNHCYGLAFVMLAYSC-GL 126 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTE-----EE-ECCEEHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCC-----CC-cCCcchHHHHHHHHHHHH-HH
Confidence 589999999999999999999999999999987532112 35554331100 00 000123444446678877 77
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhhhh-hccc--cccccccccccccch------HHHHHHHHHHcCCHHHHHHHhhccc-
Q 006861 261 YADNAEALRMTTWMVEYFYNRVQNVI-KKYS--IERHWQTLNEEAGGM------NDVLYKLFCITQDPKHLMLAHLFDK- 330 (628)
Q Consensus 261 ~tG~~kaL~ia~~~ad~~~~~~~~~~-~~~~--~~~~~~~l~~e~GGm------~~~L~~LY~~TGd~ryL~lA~~f~~- 330 (628)
.||++++|+.|.++.+.+.+++.... +.+. ....|. +.... ++ .+++.+||++|||++|++.|+...+
T Consensus 127 ~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~-~~~~~-~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~ 204 (402)
T 3gt5_A 127 KVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN-FTRYR-GQNANMHMCEAMLAAYEASGEQRYLERALVLADR 204 (402)
T ss_dssp HTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCC-BCSCE-EHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC-CCCCC-CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 79999999999999999988874311 1110 111111 11101 12 3578999999999999999876532
Q ss_pred --ccccchhh------ccCCC--CCCC----cccCCcc--hhhHH--------HHHHHHhCChHHHHHHHHHHHHhhhcC
Q 006861 331 --PCFLGLLA------LQADD--ISGF----HSNTHIP--IVIGS--------QMRYEVTGDQLHKTISMFFMDIVNSSH 386 (628)
Q Consensus 331 --~~~~~~~~------~~~d~--l~g~----hanthip--~~~G~--------a~~Y~~TGD~~y~~a~~~~~~~v~~~~ 386 (628)
..|.++.. ...|- ..+. ..+..-| +.-|| ...++++||+.|++.++..++.+.+ +
T Consensus 205 ~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~-~ 283 (402)
T 3gt5_A 205 ITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVA-R 283 (402)
T ss_dssp HHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHH-H
T ss_pred HHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-h
Confidence 11211110 00000 0000 0000001 22343 4457889999999988888887653 3
Q ss_pred cee--ecCCCCCCCCCCCcccccCCCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHHH
Q 006861 387 TYA--TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 446 (628)
Q Consensus 387 ~y~--TGG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~l 446 (628)
++- .||+-- + ..+. +......-..+...+.|.-+-.|+++|||.+|.+.++++.
T Consensus 284 gwd~~~Gg~~~-~--~d~~---g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~ 339 (402)
T 3gt5_A 284 SWDAVRGGLCY-G--FAPD---GTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLW 339 (402)
T ss_dssp HBCTTTCSBCS-E--ECTT---SCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred cccCCCCcEEE-E--EcCC---CCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 332 344421 0 0111 1001234466777788888888999999999999999885
No 7
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.51 E-value=8e-07 Score=94.32 Aligned_cols=184 Identities=19% Similarity=0.134 Sum_probs=111.6
Q ss_pred cchhhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHH
Q 006861 245 YYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLML 324 (628)
Q Consensus 245 yy~~Hki~aGLl~~Y~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~GGm~~~L~~LY~~TGd~ryL~l 324 (628)
+...|.+ .+|+++|+.||++++++++.+.++++..+-... . +.++ . ...+=+..++.++|++|||++||++
T Consensus 46 WW~a~~~-~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~---~-~~~~---~-DD~a~~~la~~~aye~t~~~~yL~~ 116 (349)
T 3k7x_A 46 WWLAHLV-EVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGT---L-IHDF---Y-DDMLWNALAAYRLYKATGKSIYLED 116 (349)
T ss_dssp HHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSS---S-CCSB---H-HHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred cHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCC---C-CccC---c-cHHHHHHHHHHHHHHHHCCchHHHH
Confidence 3466664 888999999999999999999999886542110 0 0111 0 1111123689999999999999999
Q ss_pred Hhhcc----cccccchhhccCCCCCCCccc----------CCcchhhHHHHHHHHhCChHHHHHHHHHHHHhhhcCcee-
Q 006861 325 AHLFD----KPCFLGLLALQADDISGFHSN----------THIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA- 389 (628)
Q Consensus 325 A~~f~----~~~~~~~~~~~~d~l~g~han----------thip~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~y~- 389 (628)
|+.+. ...+..+... |+..+ +..+.+...++.|++|||+.|++.|+..++.+.+ +++-
T Consensus 117 A~~l~~~l~~~~wd~~~gG------Gi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~-~l~d~ 189 (349)
T 3k7x_A 117 AQLVWQDLVDTGWNDIMGG------GFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTK-VLVRE 189 (349)
T ss_dssp HHHHHHHHHHHTBCSGGGS------CBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHBCT
T ss_pred HHHHHHHHHHhCCCCCCCC------ceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-cCCCC
Confidence 97642 1222111111 11111 1122345578889999999999999999998875 4332
Q ss_pred ecCCCCCCCCCCCcccccCCCCCccccchHHH---HHHHHHHhhhccCCchhHHHHHHHHhhhhhc
Q 006861 390 TGGTSVGEFWSDPKRLASNLDSNTEESCTTYN---MLKVSRHLFRWTKEIAYADYYERSLTNGVLG 452 (628)
Q Consensus 390 TGG~g~~E~f~~~~~L~~~~~~~~~EtCas~~---~l~~~~~L~~~tgd~~YaD~~Er~lyN~ila 452 (628)
.|.+-.+.. ... .. ....+..=++| +|.-+-.|++.|||.+|.+.+++++ |.++.
T Consensus 190 ~g~v~Dg~~--~~~--~g---~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~-~~~~~ 247 (349)
T 3k7x_A 190 DGFVEDGIN--RLE--DG---TIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA-AISLK 247 (349)
T ss_dssp TSCBCCEEC--TTS--SS---CBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHH
T ss_pred CCeEecCCc--cCC--CC---ccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH-HHHHH
Confidence 122110100 000 00 00011223332 5566678999999999999999877 44444
No 8
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=98.47 E-value=1.2e-06 Score=93.62 Aligned_cols=232 Identities=15% Similarity=0.134 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
-|-++.|++.+|..|+|+++++.+.+.++.+. + ++|.+. +.... . -.|. +..++++.|+.
T Consensus 43 ~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~---~--~~g~l~-~~~~~---l--------Dd~~---~g~~ll~lY~~ 102 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATGEKRYFEYAKAYADLLI---D--DNGNLL-FRRDE---L--------DAIQ---AGLILFPLYEQ 102 (373)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB---C--TTCCBC-CCTTC---G--------GGTG---GGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh---C--CCCccc-CCCCC---c--------chHH---HHHHHHHHHHH
Confidence 58899999999999999999999999998874 3 467654 32211 0 1111 23466789999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhhhhhcccc-cc--ccccccccccchH-HHHHHHHHHcCCHHHHHHHhhcc---ccccc
Q 006861 262 ADNAEALRMTTWMVEYFYNRVQNVIKKYSI-ER--HWQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLFD---KPCFL 334 (628)
Q Consensus 262 tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~-~~--~~~~l~~e~GGm~-~~L~~LY~~TGd~ryL~lA~~f~---~~~~~ 334 (628)
||++++++++..+++++...+...-.+... .. .+..+++-+ |+ ..|+++|++|||++|++.|.+-. .....
T Consensus 103 Tgd~~yl~~a~~la~~l~~~~r~~~G~fw~~~~~~~~~w~D~l~--m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~ 180 (373)
T 1nc5_A 103 TKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLY--MGGPFALKYANLKQETELFDQVVLQESLMRKHTK 180 (373)
T ss_dssp HCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTTSTTEEETHHHH--HHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHB
T ss_pred hCCHHHHHHHHHHHHHHHhccCCCCCCeeccCCCCCeEEeCcHH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999986544211111100 00 000011111 33 57899999999999999987521 11111
Q ss_pred chhhccCCCCCCCccc------------CC-cc---------hhhHHHHHHHH-----hCChHHHHHHHHHHHHhhhcCc
Q 006861 335 GLLALQADDISGFHSN------------TH-IP---------IVIGSQMRYEV-----TGDQLHKTISMFFMDIVNSSHT 387 (628)
Q Consensus 335 ~~~~~~~d~l~g~han------------th-ip---------~~~G~a~~Y~~-----TGD~~y~~a~~~~~~~v~~~~~ 387 (628)
++. +.+ ..|.. +. -| .+.|.++.|+. ++++.|++.++...+.+.+++-
T Consensus 181 D~~----tGl-~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~ 255 (373)
T 1nc5_A 181 DAK----TGL-FYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQD 255 (373)
T ss_dssp CTT----TSC-BCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCC----CCC-EEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcC
Confidence 211 111 00111 11 12 23667788887 6788899998888888876542
Q ss_pred ee-ecCCCCCCCCCCCcccccCCCCCccc----cchHHHHHHHHHHhhhccCCchhHHHHHHHHhhhhhc
Q 006861 388 YA-TGGTSVGEFWSDPKRLASNLDSNTEE----SCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLG 452 (628)
Q Consensus 388 y~-TGG~g~~E~f~~~~~L~~~~~~~~~E----tCas~~~l~~~~~L~~~tgd~~YaD~~Er~lyN~ila 452 (628)
. +|. |..--+-+ ..+..+-| .+.++++++..+.-+. +.+|.+.+||++ +++..
T Consensus 256 -~~dG~------W~~~ld~~-~~~~~~~EsSatA~~ay~l~~g~~~g~l---~~~Y~~~a~k~~-~~l~~ 313 (373)
T 1nc5_A 256 -KETGL------WYQIVDKG-DRSDNWLESSGSCLYMYAIAKGINKGYL---DRAYETTLLKAY-QGLIQ 313 (373)
T ss_dssp -TTTSC------CBSBTTCT-TSTTCCBCHHHHHHHHHHHHHHHHHTSS---CGGGHHHHHHHH-HHHHH
T ss_pred -CCCCc------eeeecCCC-CCCCCCccccHHHHHHHHHHHHHHCCCC---cHHHHHHHHHHH-HHHHH
Confidence 2 331 22100001 11234455 4455677765543221 468999999998 77766
No 9
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.46 E-value=1.2e-06 Score=93.57 Aligned_cols=193 Identities=10% Similarity=-0.050 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
-+.++.|++.+|..|+|+++++.+.++++.+.+.... ++|++...... ....+ .+--..|.+ .++++.|++
T Consensus 117 ~af~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d-~~g~~~~~~~~----~~~~~---~~~~~~~~~-~all~l~~~ 187 (388)
T 2gz6_A 117 DCFAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDN-PKGKYTKTYPG----TRPMK---ALAVPMILA-NLTLEMEWL 187 (388)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC-------------------CCCCE---ETHHHHHHH-HHHHHTGGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcC-CCcccCcccCC----CCCCC---CCCHHHHHH-HHHHHHHHH
Confidence 4678999999999999999999999999999887641 45765432111 10011 121223433 466789999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhhhhhc-c--cccccccccccccc-----chH----HHHHHHHHHcCCHHHHHHHhhcc
Q 006861 262 ADNAEALRMTTWMVEYFYNRVQNVIKK-Y--SIERHWQTLNEEAG-----GMN----DVLYKLFCITQDPKHLMLAHLFD 329 (628)
Q Consensus 262 tG~~kaL~ia~~~ad~~~~~~~~~~~~-~--~~~~~~~~l~~e~G-----Gm~----~~L~~LY~~TGd~ryL~lA~~f~ 329 (628)
||++++++.+.++++.+.+++.....+ . -...-|..+..+.+ |.+ ..|.+++++|||++|++.|+...
T Consensus 188 t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~ 267 (388)
T 2gz6_A 188 LPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVV 267 (388)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999998876431111 0 00011221111111 222 36899999999999999997643
Q ss_pred ccc---ccchhhc------cCC--CCCCC-cccC----CcchhhHHHHHHHHhCChHHHHHHHHHHHHhh
Q 006861 330 KPC---FLGLLAL------QAD--DISGF-HSNT----HIPIVIGSQMRYEVTGDQLHKTISMFFMDIVN 383 (628)
Q Consensus 330 ~~~---~~~~~~~------~~d--~l~g~-hant----hip~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~ 383 (628)
+.. ..++... ..+ +..+. +.+. |...+.|++..|+.|||++|++.++..|+.+.
T Consensus 268 ~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~ 337 (388)
T 2gz6_A 268 LNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSW 337 (388)
T ss_dssp HHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 211 0111000 000 00000 0000 12235778899999999999998888887665
No 10
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.30 E-value=7.4e-06 Score=87.91 Aligned_cols=249 Identities=10% Similarity=-0.047 Sum_probs=132.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCccccc-CCchh-hhhhhhcCCcccccchhhhhHHHHHHHHHHcCCHHHHHHHHHHH
Q 006861 198 NESLKEKMSAVVSALSACQKEIGSGYLSA-FPTEQ-FDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMV 275 (628)
Q Consensus 198 D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~-~~~~~-~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~tG~~kaL~ia~~~a 275 (628)
.++++++++.+++.|...++ .+|.+.. ++... .+. .....| -|..+. ...|+..+|+.||++++++.+.+.+
T Consensus 24 ~~~~~~~l~~~~~~l~~~~~--~~~~f~~~~~~~~~~d~--k~~~~W-~Wt~G~-~~~gl~~~ye~Tgd~~y~~~a~~~~ 97 (382)
T 3pmm_A 24 RSELQALIRNVTQNLVNIKD--ESGQFLLRLDDGRVIDT--KGWAGW-EWTHGV-GLYGIYQYYQQTGDIEMRDIIDRWF 97 (382)
T ss_dssp HHHHHHHHHHHHHHHHHCCC--TTCTTCEECTTSCEECS--SSTTSC-SHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccC--ccccccccCCccccccC--CCCcCc-cccHHH-HHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 46889999999999977766 5565432 22110 000 011222 233333 5568889999999999999999988
Q ss_pred HHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHHhhcccc---cccchhhccC--CCCCCCccc
Q 006861 276 EYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKP---CFLGLLALQA--DDISGFHSN 350 (628)
Q Consensus 276 d~~~~~~~~~~~~~~~~~~~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~---~~~~~~~~~~--d~l~g~han 350 (628)
+.+.+.- .+...+. .+.+-.+|..||+.|||++|++.|....+. .+......+- ......+.+
T Consensus 98 ~~~~~~~------~~~~n~D------~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~ 165 (382)
T 3pmm_A 98 ADRFAEG------ATTKNVN------TMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQ 165 (382)
T ss_dssp HHHHHHC------CCCCCTT------TTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTT
T ss_pred HHHHcCC------CCcCccc------chHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCC
Confidence 7554321 1111111 122335789999999999999998765321 1111100000 000000000
Q ss_pred CC-cc-hhh---HHHHHHHHhCChHHHHHHHHHHHHhhhcCce--eecCCCCCCCCCCCcccccCCCCCccccchHHHHH
Q 006861 351 TH-IP-IVI---GSQMRYEVTGDQLHKTISMFFMDIVNSSHTY--ATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNML 423 (628)
Q Consensus 351 th-ip-~~~---G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~y--~TGG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l 423 (628)
.- +- +.+ -.+..|++|||++|++.+..-++... ++++ .||-.-.+-.+.......... =.-.-.-+.+++.
T Consensus 166 ~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~-~~l~D~~tGl~~h~~~~~~~~~~~~~~-WaRG~gW~~~gl~ 243 (382)
T 3pmm_A 166 QMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHV-QNLMDRETGLWFHGWNYEGRHNFARAR-WARGNSWLTMVIP 243 (382)
T ss_dssp EEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHBCTTTSCBCSEEETTTTBCTTCCC-BHHHHHHHHHHHH
T ss_pred cEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHccCCCCCCeeeeccCCCCCCCCcce-ecccccHHHHHHH
Confidence 00 01 112 25677899999999986655444443 2344 234322111111000000000 0013446677777
Q ss_pred HHHHHhh---hccCCchhHHHHHHHHhhhhhccCCCCCCCcEEEEccCCC
Q 006861 424 KVSRHLF---RWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAP 470 (628)
Q Consensus 424 ~~~~~L~---~~tgd~~YaD~~Er~lyN~ila~~~~~d~~~~~Y~~pl~~ 470 (628)
.+.+.|- ..+++.+|.+.+++.+ ++++..|.+ +| +++..+..|
T Consensus 244 ~~l~~l~~p~~~~~~~~~~~~~~~~a-~~~~~~q~~-~G--~W~~~~d~~ 289 (382)
T 3pmm_A 244 DFLELVDLPEGNAVRRYLITVLDAQI-AALAECQDD-SG--LWHTLLDDP 289 (382)
T ss_dssp HHHHHHCCCTTCHHHHHHHHHHHHHH-HHHHHHCCT-TS--CEESBTTCT
T ss_pred HHHHhhcCCcchhhHHHHHHHHHHHH-HHHHHcCCC-CC--ChhhccCCC
Confidence 7666641 2245677888888777 888888852 43 666444344
No 11
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.27 E-value=1.3e-05 Score=87.46 Aligned_cols=300 Identities=12% Similarity=0.074 Sum_probs=165.8
Q ss_pred ccccCCCeEecCCCchHHHHHHHHhhhhccccchhhHHHHHhcCCCCCCCCCCCCCC------CCcCCCccchHHHHHHH
Q 006861 116 KEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEE------PSCELRGHFVGHYLSAS 189 (628)
Q Consensus 116 ~~~~l~~V~l~~~~~~~~~~~~~~~~ll~ld~drll~nFr~~agl~~~g~~~ggWe~------~d~~l~Gh~~G~~Lsal 189 (628)
-++|.+.++-. -.++..++..++|...-+.+++.. ..|-.. ..+..|.. .+..+.-.-.|..++|+
T Consensus 20 ~~~~~~~~~~~---~i~~~~d~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~y~~Gv~l~gl 91 (445)
T 3k11_A 20 YQGTYGDLTPE---QVKKDIDRVFAYIDKETPARVVDK---NTGKVI--TDYTAMGDEAQLERGAFRLASYEWGVTYSAL 91 (445)
T ss_dssp CSSCCSCCCHH---HHHHHHHHHHHHHHHTSCCCEEET---TTCCEE--CCTTTCCTTEEECCCSSCTTSHHHHHHHHHH
T ss_pred CCCCCCcCCHH---HHHHHHHHHHHHHhccCcceeecC---CCCcee--ccccccccccccccCCcccCccCHHHHHHHH
Confidence 36677777642 345666777777766444444421 011100 01112221 11111112269999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHH------HhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHHcC
Q 006861 190 ALMWASTHNESLKEKMSAVVSALSAC------QKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYAD 263 (628)
Q Consensus 190 A~~ya~t~D~~L~~k~d~~Vd~l~~~------Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~tG 263 (628)
+.+|..|+|+++++.+++.++.|.+. +. ..+|.+..-. .+... .... --| +. +..+|+..|+.|+
T Consensus 92 ~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~-~~~G~l~~~~---r~~~~-~~~L--DD~-g~-~~~~Li~lY~~T~ 162 (445)
T 3k11_A 92 IAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVY-EEKGKTDSQL---LQILT-PHAL--DDA-GA-VCTAMIKLRLKDE 162 (445)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHSCCCHHH---HHHHS-CCSG--GGT-HH-HHHHHHHHHHHCT
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhh-hccCCeeccc---ccccC-CCcc--hhH-HH-HHHHHHHHHHhcC
Confidence 99999999999999999999987753 11 0355542100 00000 0000 001 22 4567889999999
Q ss_pred CHHHHHHHHHHHHHHHHHhhhhhhc-cc---c--ccccccccccccchH-HHHHHHHHHcCCHH--HHHHHhh-cc--cc
Q 006861 264 NAEALRMTTWMVEYFYNRVQNVIKK-YS---I--ERHWQTLNEEAGGMN-DVLYKLFCITQDPK--HLMLAHL-FD--KP 331 (628)
Q Consensus 264 ~~kaL~ia~~~ad~~~~~~~~~~~~-~~---~--~~~~~~l~~e~GGm~-~~L~~LY~~TGd~r--yL~lA~~-f~--~~ 331 (628)
++++++.+...+||+.+++.+...+ .. . .+.| +++- -|+ ..|++++++|||++ |++.|.. |. ..
T Consensus 163 d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~W--iD~l--yM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~ 238 (445)
T 3k11_A 163 SLPVDGLIQNYFDFIINKEYRLADGTFARNRPQRNTLW--LDDM--FMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFAD 238 (445)
T ss_dssp TCCCHHHHHHHHHHHHHTSCBCTTCCBCBCSSSTTEEE--THHH--HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCceeecCCCCCceE--ecch--hhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999887542111 10 0 0111 1111 145 46789999999999 9998865 31 11
Q ss_pred cccchhhccCCCCCCCcccC-----Ccc---------hhhHHHHHHHH-----hCChHHHHHHHHHHHHhhhcCceeecC
Q 006861 332 CFLGLLALQADDISGFHSNT-----HIP---------IVIGSQMRYEV-----TGDQLHKTISMFFMDIVNSSHTYATGG 392 (628)
Q Consensus 332 ~~~~~~~~~~d~l~g~hant-----hip---------~~~G~a~~Y~~-----TGD~~y~~a~~~~~~~v~~~~~y~TGG 392 (628)
.++++. +.+ ..|..+ +-+ .+.|.++.++. ++.+.+++..+...+.+.+++- .+|
T Consensus 239 ~l~D~~----tGL-~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~-~~G- 311 (445)
T 3k11_A 239 RMFIPE----KGL-YRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQS-GEG- 311 (445)
T ss_dssp HHEETT----TTE-ECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCC-TTS-
T ss_pred hcccCC----CCC-EeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCC-CCC-
Confidence 222221 111 112111 111 24678888886 5566777777777777765552 233
Q ss_pred CCCCCCCCCCcccccCCCCCccccch----HHHHHHHHHHhhhccCCchhHHHHHHHHhhhhhccCC
Q 006861 393 TSVGEFWSDPKRLASNLDSNTEESCT----TYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQR 455 (628)
Q Consensus 393 ~g~~E~f~~~~~L~~~~~~~~~EtCa----s~~~l~~~~~L~~~tgd~~YaD~~Er~lyN~ila~~~ 455 (628)
.|.. +.+. +..+.||-+ ++++++..+.-+ + ....|.+.++|++ +++...++
T Consensus 312 -----~W~~---vld~-~~~y~EsSaTAmfaygllkgvr~G~-L-d~~~Y~~~A~ka~-~~L~~~i~ 366 (445)
T 3k11_A 312 -----FWHQ---LLDC-NDSYLETSATAIYVYCLAHAINKGW-I-DAIAYGPVAQLGW-HAVAGKIN 366 (445)
T ss_dssp -----CEES---BTTC-TTSCEEHHHHHHHHHHHHHHHHHTS-S-CHHHHHHHHHHHH-HHHHTTBC
T ss_pred -----chhh---ccCC-CCCCCCccHHHHHHHHHHHHHHcCC-C-CHHHHHHHHHHHH-HHHHHhCC
Confidence 3321 1111 234555443 456666554322 1 2346999999876 77776654
No 12
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=98.27 E-value=2.2e-05 Score=84.01 Aligned_cols=239 Identities=11% Similarity=0.011 Sum_probs=136.5
Q ss_pred cchHHHH-HHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCccc-ccchhhhh-HHHHH
Q 006861 180 HFVGHYL-SASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWA-PYYTIHKI-LAGLL 256 (628)
Q Consensus 180 h~~G~~L-salA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~-pyy~~Hki-~aGLl 256 (628)
|=.|-.+ ..++..|..|+|+++++.+....+.|...-. ...|++-++... ....|. +...-.++ +.+|.
T Consensus 87 HD~Gf~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~i~sw~~~-------~~~~~~~~~iID~mmni~~L~ 158 (377)
T 2ahf_A 87 HNIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWR-ADAGIIQAWGPK-------GDPENGGRIIIDCLLNLPLLL 158 (377)
T ss_dssp STHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCBSST-------TCTTTTTEEEGGGGGGHHHHH
T ss_pred CCchHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC-CCCCeEEeccCC-------CCCCCCceEEechHHHHHHHH
Confidence 3366533 3577789999999999999999999876543 133777655320 011121 22211122 34666
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhhhh----hhccc--c-cc-------cccccccc---cc--chHHHHHHHHHHcC
Q 006861 257 DQYTYADNAEALRMTTWMVEYFYNRVQNV----IKKYS--I-ER-------HWQTLNEE---AG--GMNDVLYKLFCITQ 317 (628)
Q Consensus 257 ~~Y~~tG~~kaL~ia~~~ad~~~~~~~~~----~~~~~--~-~~-------~~~~l~~e---~G--Gm~~~L~~LY~~TG 317 (628)
.+++.+|+++++++|++.++++.+.+-+. ..... . .+ ++...+.. +| -+..++..||+.|+
T Consensus 159 ~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~ 238 (377)
T 2ahf_A 159 WAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLG 238 (377)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHC
Confidence 78899999999999999999998876321 00000 0 00 00001111 11 12368899999999
Q ss_pred CHHHHHHHhhccc---ccccchhhccCCCCCCCc-------ccCCcch-----hhHHHHHHHHhC-----ChHHHHHHHH
Q 006861 318 DPKHLMLAHLFDK---PCFLGLLALQADDISGFH-------SNTHIPI-----VIGSQMRYEVTG-----DQLHKTISMF 377 (628)
Q Consensus 318 d~ryL~lA~~f~~---~~~~~~~~~~~d~l~g~h-------anthip~-----~~G~a~~Y~~TG-----D~~y~~a~~~ 377 (628)
|++||+.|+.+.+ ..+ + .|.....+ .....|. +.|..+.+++++ +++|+++++.
T Consensus 239 d~~yL~~A~~la~~~l~~~--~----~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~ 312 (377)
T 2ahf_A 239 NADLLETAKRMARHFLARV--P----EDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKT 312 (377)
T ss_dssp CHHHHHHHHHHHHHHHTTC--C----TTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhh--H----HhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHH
Confidence 9999999987532 111 1 01100000 0111232 355677788896 6789999999
Q ss_pred HHHHhhhcCceeecCCCCCCCCCCCcccccCCCCCccccchHHHHHHHHHHhhhccCC
Q 006861 378 FMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE 435 (628)
Q Consensus 378 ~~~~v~~~~~y~TGG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tgd 435 (628)
..+.+.....-..|..+.+.--..-+..+. ......|..++--++.+-|.++.++
T Consensus 313 ~l~~l~~~y~~~~~~~~~g~L~h~~~~~~~---~~~~d~~~~ygDy~~~Eal~r~~~~ 367 (377)
T 2ahf_A 313 TVTALRDGYAERDDGEAEGFIRRGSYHVRG---GISPDDYTIWGDYYYLEALLRLERG 367 (377)
T ss_dssp HHHHHHHHTBCCCCSSCCCSBSCBCSBTTT---TBSSSBCBHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCCCeEEecccccCCC---CCCCCcCccHHHHHHHHHHHHHHcC
Confidence 888886422212222222222111111221 2246678888888888888887654
No 13
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=98.21 E-value=2.6e-05 Score=84.57 Aligned_cols=255 Identities=9% Similarity=0.062 Sum_probs=147.2
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhc-CCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEI-GSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYT 260 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~-~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~ 260 (628)
-|..+.++|.+|. ++++++.+.++..++.|.+.-... +.|+..+... .+..... ...|..=.++.++.+ |+
T Consensus 53 nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~----dg~~~~~--k~lyd~Af~i~al~~-~~ 124 (421)
T 2zbl_A 53 TARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND----QGVVDAS--KQGYQHFFALLGAAS-AV 124 (421)
T ss_dssp HHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET----TEEEECC--EEHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC----CCCcCCc--hhHHHHHHHHHHHHH-HH
Confidence 5888889999987 999999999999999998764210 2356532211 0110010 223444446668777 99
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhhh-hhcc--ccccccccccc--cc-c--chHHHHHHHHHHcCCHHHHHHHhhccc--
Q 006861 261 YADNAEALRMTTWMVEYFYNRVQNV-IKKY--SIERHWQTLNE--EA-G--GMNDVLYKLFCITQDPKHLMLAHLFDK-- 330 (628)
Q Consensus 261 ~tG~~kaL~ia~~~ad~~~~~~~~~-~~~~--~~~~~~~~l~~--e~-G--Gm~~~L~~LY~~TGd~ryL~lA~~f~~-- 330 (628)
+||++++++.+....+++.+.+... .+++ ....-+..+.. .. + -+.++|.+||++|||++|++.|+...+
T Consensus 125 ~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~ 204 (421)
T 2zbl_A 125 TTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVI 204 (421)
T ss_dssp TTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHH
T ss_pred HhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999999999999998877432 1111 00111111000 00 1 124788999999999999988765421
Q ss_pred -ccccch----hh--ccCC--CCCCC----cccCC-----cch-----hhHHHHHHHHh---CC--h-HHHHHHHHHHHH
Q 006861 331 -PCFLGL----LA--LQAD--DISGF----HSNTH-----IPI-----VIGSQMRYEVT---GD--Q-LHKTISMFFMDI 381 (628)
Q Consensus 331 -~~~~~~----~~--~~~d--~l~g~----hanth-----ip~-----~~G~a~~Y~~T---GD--~-~y~~a~~~~~~~ 381 (628)
..+..+ +. ...+ .+... -.+.. -|- +-+....|+++ || + .|++.+...++.
T Consensus 205 ~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~ 284 (421)
T 2zbl_A 205 IHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHA 284 (421)
T ss_dssp CCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred HHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHH
Confidence 111110 00 0000 01010 00111 121 12346668888 67 5 899999888888
Q ss_pred hhhcCcee-e--cCCCCCCCCCCCcccccCCCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHHHhhhhhc
Q 006861 382 VNSSHTYA-T--GGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLG 452 (628)
Q Consensus 382 v~~~~~y~-T--GG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~lyN~ila 452 (628)
+.+ +++- . ||+=-. ..+. +.......+.+...+.+.-+-.|+++|||.+|.+.+++++ +.+..
T Consensus 285 ~~~-~g~d~~~~GG~~~~---~~~~---g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~-~~~~~ 350 (421)
T 2zbl_A 285 TIR-DAWAPDGADGFVYS---VDWD---GKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWW-DYCIK 350 (421)
T ss_dssp HHH-HHBSCSSSSSBCSC---BCTT---SCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHH
T ss_pred HHH-HhcCCCCCCcEEEe---ecCC---CCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHH
Confidence 763 4442 2 443211 1110 1111234455666667777778999999999999999864 44443
No 14
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=98.12 E-value=3.4e-05 Score=82.98 Aligned_cols=231 Identities=10% Similarity=-0.015 Sum_probs=132.4
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHHcCCHHHH
Q 006861 189 SALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEAL 268 (628)
Q Consensus 189 lA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~tG~~kaL 268 (628)
++..|..|+|++.++.+....+.|...-. ...|++-+..... +.. ....|-- +.+ -+.+|..+++.+|+++++
T Consensus 123 ~~~~y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~iqsw~~~~-~~~--~~~~iID-~~m--ni~~L~~A~~~~gd~~y~ 195 (397)
T 2zzr_A 123 CTAEYRINGDVKALEATIKAADKLMERYQ-EKGGFIQAWGELG-YKE--HYRLIID-CLL--NIQLLFFAYEQTGDEKYR 195 (397)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCSSSTT-CGG--GCEEETT-HHH--HTHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhC-cCCCEEEecccCC-CCC--CCceeec-hHh--HHHHHHHHHHHhCCHHHH
Confidence 67788899999999999999999975442 1457776653210 000 0111111 111 134666788999999999
Q ss_pred HHHHHHHHHHHHHhhhh----hhcccc---cc-------cccccccc---cc--chHHHHHHHHHHcCCHHHHHHHhhcc
Q 006861 269 RMTTWMVEYFYNRVQNV----IKKYSI---ER-------HWQTLNEE---AG--GMNDVLYKLFCITQDPKHLMLAHLFD 329 (628)
Q Consensus 269 ~ia~~~ad~~~~~~~~~----~~~~~~---~~-------~~~~l~~e---~G--Gm~~~L~~LY~~TGd~ryL~lA~~f~ 329 (628)
++|++.++++.+.+-+. ...+.. .+ ++...+.. +| -+..++..||+.|||++||++|+.+.
T Consensus 196 ~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la 275 (397)
T 2zzr_A 196 QVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMT 275 (397)
T ss_dssp HHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 99999999998876321 000000 01 00001110 11 12368899999999999999998753
Q ss_pred c---ccccchhhccCCCCCCCcc-cCCc------c-----hhhHHHHHHHHhCC---hH--HHHHHHHHHHHhhhcCcee
Q 006861 330 K---PCFLGLLALQADDISGFHS-NTHI------P-----IVIGSQMRYEVTGD---QL--HKTISMFFMDIVNSSHTYA 389 (628)
Q Consensus 330 ~---~~~~~~~~~~~d~l~g~ha-nthi------p-----~~~G~a~~Y~~TGD---~~--y~~a~~~~~~~v~~~~~y~ 389 (628)
+ ..| + .|.....+. ...+ | .+.|..+++++||+ ++ |+++++...+.+.....-.
T Consensus 276 ~~~l~~~--~----~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~ 349 (397)
T 2zzr_A 276 NYFLNRL--P----EDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIEQYSNN 349 (397)
T ss_dssp HHHHHTC--C----TTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHHHTBCC
T ss_pred HHHHHhh--H----HhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 2 111 1 111100000 0001 2 13556777888987 77 9999998888887432111
Q ss_pred ecCCCCCCCCCCCcccccCCCCCccccchHHHHHHHHHHhhhccCC
Q 006861 390 TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE 435 (628)
Q Consensus 390 TGG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tgd 435 (628)
.|..+.+.--..-+..+. ......|.+++--++.+-|.++.++
T Consensus 350 ~~~~~~glL~h~~~~~~~---~~~~d~~~~~gDYy~~Eal~r~~~~ 392 (397)
T 2zzr_A 350 ELIAGRPLLLHGVYSWHS---GKGVDEGNIWGDYYYLEALIRFYKD 392 (397)
T ss_dssp CCCTTCCSBCCEEEETTT---TEEEEECBHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCceeeeceeeCCC---CCCCCCCcchHHHHHHHHHHHHhcC
Confidence 222222211111111221 2356778899999999999888775
No 15
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.12 E-value=3e-05 Score=83.47 Aligned_cols=192 Identities=9% Similarity=-0.020 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHh-hcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 183 GHYLSASALMWASTHNESLKEKMSAVVSALSACQK-EIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 183 G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~-~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
...+-|++. |..|+|++.++.+.++.+.|.+.-. ..+.||..++... ++ ....-.+.-.+|.++ +++..|++
T Consensus 116 Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~----~~-~~~~~~~n~~m~l~e-all~L~~~ 188 (402)
T 3gt5_A 116 AFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ----WN-FTRYRGQNANMHMCE-AMLAAYEA 188 (402)
T ss_dssp HHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT----CC-BCSCEEHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC----CC-CCCCCCCCHHHHHHH-HHHHHHHh
Confidence 456777777 5569999999999999999987742 1123555333221 11 111101222345555 45689999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhhhhhcc---cccccccccc---------------ccccchH----HHHHHHHHHcCCH
Q 006861 262 ADNAEALRMTTWMVEYFYNRVQNVIKKY---SIERHWQTLN---------------EEAGGMN----DVLYKLFCITQDP 319 (628)
Q Consensus 262 tG~~kaL~ia~~~ad~~~~~~~~~~~~~---~~~~~~~~l~---------------~e~GGm~----~~L~~LY~~TGd~ 319 (628)
||++++++.+.++++.+.+++-+...+. ....-|.+.. .+. |+. ..|.++++.||++
T Consensus 189 tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~p-GH~iE~awlLl~~~~~~~~~ 267 (402)
T 3gt5_A 189 SGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQP-GHQTEWAKLLLILDRYIEVE 267 (402)
T ss_dssp HCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCH-HHHHHHHHHHHHHHHHCCCT
T ss_pred hCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCC-ChHHHHHHHHHHHHHhhCcH
Confidence 9999999999999999987654311110 0001122110 011 332 3578999999999
Q ss_pred HHHHHHhhccccc---ccchhhcc----CCCCCCCccc------CCcchhhHHHHHHHHhCChHHHHHHHHHHHHhh
Q 006861 320 KHLMLAHLFDKPC---FLGLLALQ----ADDISGFHSN------THIPIVIGSQMRYEVTGDQLHKTISMFFMDIVN 383 (628)
Q Consensus 320 ryL~lA~~f~~~~---~~~~~~~~----~d~l~g~han------thip~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~ 383 (628)
+|++.|+.+.+.. ..++...+ .|. .+.-.. .|...+.|++..|+.|||+.|++.++..|+.+.
T Consensus 268 ~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~-~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~ 343 (402)
T 3gt5_A 268 WLVPVARSLFDVAVARSWDAVRGGLCYGFAP-DGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAW 343 (402)
T ss_dssp THHHHHHHHHHHHHHHHBCTTTCSBCSEECT-TSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcEEEEEcC-CCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999998753211 11111000 000 010000 111134678899999999999999999888775
No 16
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.95 E-value=0.00014 Score=77.94 Aligned_cols=271 Identities=8% Similarity=-0.069 Sum_probs=148.1
Q ss_pred hHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHhhcCC---cccccCCchhhhhhhhcCCcccccchhhhhHHHH
Q 006861 182 VGHYLSASALMWAST---HNESLKEKMSAVVSALSACQKEIGS---GYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGL 255 (628)
Q Consensus 182 ~G~~LsalA~~ya~t---~D~~L~~k~d~~Vd~l~~~Q~~~~d---GYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGL 255 (628)
-|..|.++|.+|..+ +++++++.++..++.|.+.-.. ++ |+..+...+ +... ..-...|..-.+..++
T Consensus 58 nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d-~~gg~g~~~s~d~d----g~~~-~~~~~lyd~af~~~a~ 131 (402)
T 1fp3_A 58 QGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARV-APPEKKCAFVLTRD----GRPV-KVQRSIFSECFYTMAM 131 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBS-STTSCCBCSEECTT----SCEE-ECCSSSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccC-cCCCCceEEEECCC----CCcc-ccccchHHHHHHHHHH
Confidence 366688888888776 9999999999999999987421 32 565332110 0000 0001122333356678
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhh-hhhhccccc-cccccccccccc-hH--HHHHH---HHHHcCCHHHHHHHhh
Q 006861 256 LDQYTYADNAEALRMTTWMVEYFYNRVQ-NVIKKYSIE-RHWQTLNEEAGG-MN--DVLYK---LFCITQDPKHLMLAHL 327 (628)
Q Consensus 256 l~~Y~~tG~~kaL~ia~~~ad~~~~~~~-~~~~~~~~~-~~~~~l~~e~GG-m~--~~L~~---LY~~TGd~ryL~lA~~ 327 (628)
+++|++||++++++.|.++.+++.+.+. ...+.+... .-+..... ..+ |. +++.. ||.+|+++ |++.|+.
T Consensus 132 ~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~~~~~~~~-~~~~m~~~~~~l~l~~l~~~~~~~-~~~~a~~ 209 (402)
T 1fp3_A 132 NELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLPGAVASES-MAVPMMLLCLVEQLGEEDEELAGR-YAQLGHW 209 (402)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCTTSCCEEE-THHHHHHHHHHHHHHTTCHHHHHH-THHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCccccCccCCCC-cchHHHHHHHHHHHHHHHHhcCcH-HHHHHHH
Confidence 8999999999999999999999988774 211111100 00111110 011 11 34556 77888655 8877765
Q ss_pred c----ccccccchhhc----cCCCCCCCc-ccCC-cchhhH--------HHHHHHHhCChHHHHHHHHHHHHh-hhcCce
Q 006861 328 F----DKPCFLGLLAL----QADDISGFH-SNTH-IPIVIG--------SQMRYEVTGDQLHKTISMFFMDIV-NSSHTY 388 (628)
Q Consensus 328 f----~~~~~~~~~~~----~~d~l~g~h-anth-ip~~~G--------~a~~Y~~TGD~~y~~a~~~~~~~v-~~~~~y 388 (628)
. ... +.+... ..|. .+.. .+.. -++..| .+..++++||+.|+++++...+.+ .+ +++
T Consensus 210 ~~~~~~~~--~~~~~~~~~e~~d~-dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~-~~~ 285 (402)
T 1fp3_A 210 CARRILQH--VQRDGQAVLENVSE-DGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFR-SGW 285 (402)
T ss_dssp HHHHHHTT--EETTTTEECSEEET-TSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHH-HHB
T ss_pred HHHHHHHH--hCcCCCeEEEEECC-CCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH-Hhc
Confidence 3 222 121100 0000 0000 0000 001223 445589999999999998888877 53 343
Q ss_pred e-e-cCCCCCCCCCCCcccccCCCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHHHhhhhhccC-CCCCCCcEEEE
Q 006861 389 A-T-GGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQ-RGTEPGVMIYL 465 (628)
Q Consensus 389 ~-T-GG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~lyN~ila~~-~~~d~~~~~Y~ 465 (628)
- . ||.-..-.+ +......+.......+...+.+.-+-.|++.|||.+|.+.++++. +-+.... ++.+|+-|.+.
T Consensus 286 d~~~gg~~~~~~~--~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~-~~~~~~f~D~~~G~w~~~~ 362 (402)
T 1fp3_A 286 DADHGGLFYFQDA--DGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVA-EYTFRQFRDPEYGEWFGYL 362 (402)
T ss_dssp CTTTCSBCSCEET--TSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHTBCTTTSSBCCEE
T ss_pred cCCCCCEEEeecC--CCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCcCCCCCceEeeE
Confidence 2 2 443211011 010111111223344667777777888999999999999988853 5555443 22234444444
Q ss_pred cc
Q 006861 466 LP 467 (628)
Q Consensus 466 ~p 467 (628)
++
T Consensus 363 ~~ 364 (402)
T 1fp3_A 363 NR 364 (402)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 17
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.75 E-value=0.00022 Score=75.99 Aligned_cols=166 Identities=10% Similarity=-0.010 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHHhhcccccccchhhccCCCCC-
Q 006861 267 ALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDIS- 345 (628)
Q Consensus 267 aL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~~~~~~~~~~d~l~- 345 (628)
....+.+++|+++++..+..... ...|. =+.|-+..+|.++|+.|||++|++.|+...+..+ .. .+ .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--~~~W~---w~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~-~~--~g--~l~~ 82 (373)
T 1nc5_A 13 PLTYAEALANTIMNTYTVEELPP--ANRWH---YHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLI-DD--NG--NLLF 82 (373)
T ss_dssp HHHHHHHHHHHHHHHCCTTTSSS--TTCCC---HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB-CT--TC--CBCC
T ss_pred hHHHHHHHHHHHHHhCCCcccCC--CCCcc---hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh-CC--CC--cccC
Confidence 45788999999988754321110 11121 1234456789999999999999999987533211 11 00 010
Q ss_pred -CCcccCCcchhhHHHHHHHHhCChHHHHHHHHHHHHhhhcCc-eeecCCCCCCCCCCCcccccCCCCCccccchHH-HH
Q 006861 346 -GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHT-YATGGTSVGEFWSDPKRLASNLDSNTEESCTTY-NM 422 (628)
Q Consensus 346 -g~hanthip~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~-y~TGG~g~~E~f~~~~~L~~~~~~~~~EtCas~-~~ 422 (628)
.-+.. +..+..+....|+.|||++|++++....+.+.+ +- -..||+ |..+. .....-|-.. -.
T Consensus 83 ~~~~lD-d~~~g~~ll~lY~~Tgd~~yl~~a~~la~~l~~-~~r~~~G~f-----w~~~~-------~~~~~w~D~l~m~ 148 (373)
T 1nc5_A 83 RRDELD-AIQAGLILFPLYEQTKDERYVKAAKRLRSLYGT-LNRTSEGGF-----WHKDG-------YPYQMWLDGLYMG 148 (373)
T ss_dssp CTTCGG-GTGGGGGHHHHHHHHCCHHHHHHHHHHHGGGGT-SCBCTTSCB-----CSCTT-------STTEEETHHHHHH
T ss_pred CCCCcc-hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-ccCCCCCCe-----eccCC-------CCCeEEeCcHHHH
Confidence 00111 222456788899999999999999999998853 22 112322 32210 1112223232 22
Q ss_pred HHHHHHhhhccCCchhHHHHHHHHhhhhhccCCC
Q 006861 423 LKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRG 456 (628)
Q Consensus 423 l~~~~~L~~~tgd~~YaD~~Er~lyN~ila~~~~ 456 (628)
+-+.-++.++|||.+|.|.+++.+-...--..++
T Consensus 149 ~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~ 182 (373)
T 1nc5_A 149 GPFALKYANLKQETELFDQVVLQESLMRKHTKDA 182 (373)
T ss_dssp HHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4455678999999999999999876554434443
No 18
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.66 E-value=0.00036 Score=75.50 Aligned_cols=194 Identities=11% Similarity=0.042 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhc-CCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 183 GHYLSASALMWASTHNESLKEKMSAVVSALSACQKEI-GSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 183 G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~-~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
+..+.|++. |..++|+..++.+.++++.+.+.-... ..||..+.... ++.....-.+.-.+|.+ .+++..|++
T Consensus 114 Af~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d----~~~~~~~~~~n~~m~~~-~al~~l~~~ 187 (421)
T 2zbl_A 114 FFALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEA----FSQTEDYRGGNANMHAV-EAFLIVYDV 187 (421)
T ss_dssp HHHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT----SCSBCSCEEHHHHHHHH-HHHHHHHHT
T ss_pred HHHHHHHHH-HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCC----CCcccccCCCcHHHHHH-HHHHHHHHh
Confidence 456778888 889999999999999999888754311 23566554321 00011110111122444 466689999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhhhhhc-cc--cccccccccc---------c-----ccch----HHHHHHHHHHc---C
Q 006861 262 ADNAEALRMTTWMVEYFYNRVQNVIKK-YS--IERHWQTLNE---------E-----AGGM----NDVLYKLFCIT---Q 317 (628)
Q Consensus 262 tG~~kaL~ia~~~ad~~~~~~~~~~~~-~~--~~~~~~~l~~---------e-----~GGm----~~~L~~LY~~T---G 317 (628)
||++++++.|.++++.+.+.+.+...+ .. ...-|..+.. . .-|+ ...|.++|+.+ |
T Consensus 188 tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~ 267 (421)
T 2zbl_A 188 THDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARF 267 (421)
T ss_dssp TCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHccccc
Confidence 999999999999999987654321111 00 0011111111 0 0122 24778999999 6
Q ss_pred C--H-HHHHHHhhcccc---cccchh-hcc----CCCCCCCccc------CCcchhhHHHHHHHHhCChHHHHHHHHHHH
Q 006861 318 D--P-KHLMLAHLFDKP---CFLGLL-ALQ----ADDISGFHSN------THIPIVIGSQMRYEVTGDQLHKTISMFFMD 380 (628)
Q Consensus 318 d--~-ryL~lA~~f~~~---~~~~~~-~~~----~d~l~g~han------thip~~~G~a~~Y~~TGD~~y~~a~~~~~~ 380 (628)
| + +|++.|..+.+. .+.++. ..+ .+. .+.-.. .+...+.+.+..|++|||+.|++.++..|+
T Consensus 268 ~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~-~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~~ 346 (421)
T 2zbl_A 268 ETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDW-DGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWD 346 (421)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCT-TSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecC-CCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6 5 899999765321 111111 000 000 000000 011124678889999999999999988888
Q ss_pred Hhh
Q 006861 381 IVN 383 (628)
Q Consensus 381 ~v~ 383 (628)
.+.
T Consensus 347 ~~~ 349 (421)
T 2zbl_A 347 YCI 349 (421)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 19
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.53 E-value=0.00064 Score=72.73 Aligned_cols=187 Identities=11% Similarity=-0.011 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCccccc--ch--hhhhHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPY--YT--IHKILAGLLD 257 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~py--y~--~Hki~aGLl~ 257 (628)
-+.++.|++.+|..|+|++.++.+.++++.+.+.-...+.|++.+... .|.++ .+ +|.+.+ ++.
T Consensus 124 ~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~-----------~~~~~~~~~~~m~~~~~-~l~ 191 (402)
T 1fp3_A 124 ECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLP-----------GAVASESMAVPMMLLCL-VEQ 191 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCT-----------TSCCEEETHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCcccc-----------CccCCCCcchHHHHHHH-HHH
Confidence 357888999999999999999999999999988763125677643221 12221 12 244433 334
Q ss_pred ---HHHHcCCHHHHHHHHHHHHHHHHHhhhhhhccc--ccccccccccc-----ccch-H---HHHHHHHHHcCCHHHHH
Q 006861 258 ---QYTYADNAEALRMTTWMVEYFYNRVQNVIKKYS--IERHWQTLNEE-----AGGM-N---DVLYKLFCITQDPKHLM 323 (628)
Q Consensus 258 ---~Y~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~--~~~~~~~l~~e-----~GGm-~---~~L~~LY~~TGd~ryL~ 323 (628)
.|..+++ +.++.+.++++.+.+.+.+..+... ...-|.+.... .-|+ . ..|+++++++||++|++
T Consensus 192 l~~l~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~e~~d~dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~ 270 (402)
T 1fp3_A 192 LGEEDEELAG-RYAQLGHWCARRILQHVQRDGQAVLENVSEDGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRA 270 (402)
T ss_dssp HHTTCHHHHH-HTHHHHHHHHHHHHTTEETTTTEECSEEETTSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHhcCc-HHHHHHHHHHHHHHHHhCcCCCeEEEEECCCCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHH
Confidence 5566644 4778888888777554211000000 00112111000 0122 1 26889999999999999
Q ss_pred HHhhccccc----ccchhhccCCCCCC-CcccCCc---------------chhhHHHHHHHHhCChHHHHHHHHHHHHhh
Q 006861 324 LAHLFDKPC----FLGLLALQADDISG-FHSNTHI---------------PIVIGSQMRYEVTGDQLHKTISMFFMDIVN 383 (628)
Q Consensus 324 lA~~f~~~~----~~~~~~~~~d~l~g-~hanthi---------------p~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~ 383 (628)
.|+...+.. ..++.. ..+.. ....... ..+.|++..|+.|||++|++.++..++.+.
T Consensus 271 ~A~~~~~~~~~~~~~d~~~---gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~ 347 (402)
T 1fp3_A 271 HVIDTFLLLPFRSGWDADH---GGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTF 347 (402)
T ss_dssp HHHHHHTHHHHHHHBCTTT---CSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCC---CCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 997643221 111100 00000 0000111 125789999999999999999998888876
Q ss_pred h
Q 006861 384 S 384 (628)
Q Consensus 384 ~ 384 (628)
+
T Consensus 348 ~ 348 (402)
T 1fp3_A 348 R 348 (402)
T ss_dssp H
T ss_pred H
Confidence 3
No 20
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.29 E-value=0.0018 Score=70.53 Aligned_cols=212 Identities=10% Similarity=0.071 Sum_probs=112.3
Q ss_pred hhhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh---hhhhcc-cccc-c-----cccccccccchHHHHHHHHHHc
Q 006861 247 TIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQ---NVIKKY-SIER-H-----WQTLNEEAGGMNDVLYKLFCIT 316 (628)
Q Consensus 247 ~~Hki~aGLl~~Y~~tG~~kaL~ia~~~ad~~~~~~~---~~~~~~-~~~~-~-----~~~l~~e~GGm~~~L~~LY~~T 316 (628)
..-..+.||..+|+.||++++++.+.+.+|++.+.+. ....+. .+.. + ...++. .|.|..+|+.+|+.|
T Consensus 83 ~~Gv~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD-~g~~~~~Li~lY~~T 161 (445)
T 3k11_A 83 EWGVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDD-AGAVCTAMIKLRLKD 161 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGG-THHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchh-HHHHHHHHHHHHHhc
Confidence 3344677999999999999999999999998865322 011100 0000 0 001222 345668899999999
Q ss_pred CCHHHHHHHhhcccccccchhhccCCCCCCC-cccCC---c--c-hhhH---HHHHHHHhCChH--HHHHHHHHHHHhhh
Q 006861 317 QDPKHLMLAHLFDKPCFLGLLALQADDISGF-HSNTH---I--P-IVIG---SQMRYEVTGDQL--HKTISMFFMDIVNS 384 (628)
Q Consensus 317 Gd~ryL~lA~~f~~~~~~~~~~~~~d~l~g~-hanth---i--p-~~~G---~a~~Y~~TGD~~--y~~a~~~~~~~v~~ 384 (628)
+|++|++.|....+.-. .. ..+..-.++ |.... + - +.++ .+..+++|||++ |.+.+..-+....
T Consensus 162 ~d~~yl~~a~~~ad~L~-~~--~pRt~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~- 237 (445)
T 3k11_A 162 ESLPVDGLIQNYFDFII-NK--EYRLADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFA- 237 (445)
T ss_dssp TTCCCHHHHHHHHHHHH-HT--SCBCTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHHH-Hc--CCCCCCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHH-
Confidence 99999999875422100 00 000000111 21110 0 0 1244 455679999999 9775554444333
Q ss_pred cCce--eecCCCCCCCCCCCc-ccccCCCCCccccchHHHHHHHHHHhhh-ccCCchhHHHHHHHHhhhhhccCCCCCCC
Q 006861 385 SHTY--ATGGTSVGEFWSDPK-RLASNLDSNTEESCTTYNMLKVSRHLFR-WTKEIAYADYYERSLTNGVLGIQRGTEPG 460 (628)
Q Consensus 385 ~~~y--~TGG~g~~E~f~~~~-~L~~~~~~~~~EtCas~~~l~~~~~L~~-~tgd~~YaD~~Er~lyN~ila~~~~~d~~ 460 (628)
++++ .||-.-.+ |.... .-+... =...-....++++.+.+.|-. .+++.+|.+.+.+.+ ++++.-|.+ +|
T Consensus 238 ~~l~D~~tGL~~Hg--~~~~~~~~~~~~-WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a-~~l~~~Q~~-~G- 311 (445)
T 3k11_A 238 DRMFIPEKGLYRHG--WVESSTDHPAFC-WARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHV-RGVTALQSG-EG- 311 (445)
T ss_dssp HHHEETTTTEECSE--EETTCSSCCCCC-BHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHH-HHHHTTCCT-TS-
T ss_pred HhcccCCCCCEeee--ecCCCCCCCcce-ecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHH-HHHHHhCCC-CC-
Confidence 2343 23322111 11000 000000 011344667777776666543 245667778877776 888888852 33
Q ss_pred cEEEEccCCC
Q 006861 461 VMIYLLPLAP 470 (628)
Q Consensus 461 ~~~Y~~pl~~ 470 (628)
+++..+..|
T Consensus 312 -~W~~vld~~ 320 (445)
T 3k11_A 312 -FWHQLLDCN 320 (445)
T ss_dssp -CEESBTTCT
T ss_pred -chhhccCCC
Confidence 666443334
No 21
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=97.11 E-value=0.023 Score=63.77 Aligned_cols=238 Identities=12% Similarity=0.043 Sum_probs=123.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhh---cC---------Ccccccc------hhhhhHHHHHHHHH
Q 006861 199 ESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEA---LI---------PVWAPYY------TIHKILAGLLDQYT 260 (628)
Q Consensus 199 ~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~---~~---------~~w~pyy------~~Hki~aGLl~~Y~ 260 (628)
+.+++.+..-+|.|+++|. ++|++-.- ..+.|.. .| ....+.| ..-+..|+|..+++
T Consensus 190 ~~lldE~rWg~D~llkm~~--~~g~~y~q---Vgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asr 264 (586)
T 3h7l_A 190 TRLIEEALFGADFLVRMQN--EKGFFYMT---VFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASR 264 (586)
T ss_dssp HHHHHHHHHHHHHHHHTBC--TTSCBBCE---EECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhccc--CCCeEEEE---ecCCCCCCCCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhc
Confidence 4788888888999999999 89885321 1111210 00 0111111 11123455555555
Q ss_pred H-----cCCHHHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHHhhccc-----
Q 006861 261 Y-----ADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK----- 330 (628)
Q Consensus 261 ~-----tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~----- 330 (628)
. .+.++.|+.|+++.+|+.+....... ++- .-+..|. -+..+.+|||+.|||++||+.|..+.+
T Consensus 265 vf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~~----~g~-~~~~De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~ 338 (586)
T 3h7l_A 265 LGVHGEYDQQKYRNAAENGYWHLKEHNTQYLN----DGE-ENIIDEY-CALLASVELFKATKETRYLEESRLWAQRLVAR 338 (586)
T ss_dssp SSSCSSSCHHHHHHHHHHHHHHHHHHHHHHST----TSC-CCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCcChHHHHHHHHHHHHHHHhcCccccC----CCC-ccchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 5 45689999999999999765432211 110 1112333 235788999999999999999876321
Q ss_pred ------ccccchhhccCCCCCCCcccCCcchhhHHHHHHHHhCChHHHHHH----HHHHH---Hhhhc--------Ccee
Q 006861 331 ------PCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTIS----MFFMD---IVNSS--------HTYA 389 (628)
Q Consensus 331 ------~~~~~~~~~~~d~l~g~hanthip~~~G~a~~Y~~TGD~~y~~a~----~~~~~---~v~~~--------~~y~ 389 (628)
..+++..... ..-+..|.....--++..++..++++|+.+++.+ +...+ .+.++ +.|+
T Consensus 339 ~~~~~~~g~~w~~~d~-~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~ 417 (586)
T 3h7l_A 339 QMSDEQIQHFWSANQD-GSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYV 417 (586)
T ss_dssp EECCSSCSSEEBSSSS-SSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEE
T ss_pred ccCCccCCCcCCCccc-CCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHh
Confidence 1122211000 0112223222111234456667899987443333 33333 12211 1344
Q ss_pred ecCCC-CCCCCCCCcccccCCCCCc---cccchHHHHHHHHHHhhhccCC----chhHHHHHHHHhhhhhcc
Q 006861 390 TGGTS-VGEFWSDPKRLASNLDSNT---EESCTTYNMLKVSRHLFRWTKE----IAYADYYERSLTNGVLGI 453 (628)
Q Consensus 390 TGG~g-~~E~f~~~~~L~~~~~~~~---~EtCas~~~l~~~~~L~~~tgd----~~YaD~~Er~lyN~ila~ 453 (628)
.|..+ ....|+.|..- ...| .+.=...|..+++-.-+.+++| .+|.|.....+ |=|||.
T Consensus 418 ~~~~~~~~~~y~~p~~~----~~~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~ql-dyiLG~ 484 (586)
T 3h7l_A 418 KGVNESKRDAFFVAHNN----ESGYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDAL-NWIVGL 484 (586)
T ss_dssp CCTTSCCEEESSCCSSS----TTSSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHH-HHHBTC
T ss_pred hhhccccccccccccCC----CCCCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhh-hhhccC
Confidence 33222 22334333221 0111 2222334555556666778898 78988888777 667765
No 22
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=96.89 E-value=0.006 Score=66.93 Aligned_cols=198 Identities=12% Similarity=0.060 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccccc-----------ccc----cccccccchHHHHHHHHHH
Q 006861 251 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIER-----------HWQ----TLNEEAGGMNDVLYKLFCI 315 (628)
Q Consensus 251 i~aGLl~~Y~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~-----------~~~----~l~~e~GGm~~~L~~LY~~ 315 (628)
++-||+.+|..+|++.+|+.|+.++|.+..-|.. +.+.+... .|. ..-.|.|.+.+=+..|.++
T Consensus 110 ~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdT-ptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~l 188 (478)
T 1nxc_A 110 FVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHT-PSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHL 188 (478)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-SSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHH
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcC-CCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHH
Confidence 5789999999999999999999999999766642 11111100 111 1123456666677899999
Q ss_pred cCCHHHHHHHhhcccc-----cccchhhccCCCCCCCcccCCcchh-------hHHHHHHHHhC--ChHHHHHHHHHHHH
Q 006861 316 TQDPKHLMLAHLFDKP-----CFLGLLALQADDISGFHSNTHIPIV-------IGSQMRYEVTG--DQLHKTISMFFMDI 381 (628)
Q Consensus 316 TGd~ryL~lA~~f~~~-----~~~~~~~~~~d~l~g~hanthip~~-------~G~a~~Y~~TG--D~~y~~a~~~~~~~ 381 (628)
|||++|.+.|++..+. ...+-....-|..+|...+.++-+- +=..+.|.++| |+.|++.-....+.
T Consensus 189 TGd~~Y~~~a~~~~~~l~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a~~~ 268 (478)
T 1nxc_A 189 SGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQA 268 (478)
T ss_dssp HCCTHHHHHHHHHHHHHHHSCCGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HCChHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccCceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 9999999999886321 0000000011122222222222221 11466678887 67888777777776
Q ss_pred hhhcCceeecCCCCCCCCCCCccccc-C-CCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHH------Hhhhhhcc
Q 006861 382 VNSSHTYATGGTSVGEFWSDPKRLAS-N-LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS------LTNGVLGI 453 (628)
Q Consensus 382 v~~~~~y~TGG~g~~E~f~~~~~L~~-~-~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~------lyN~ila~ 453 (628)
+.+ |+.-.. - .+-.|... +.+ . .+....-+|-.-+|+-+.-.++......+|.+..++. +|+....+
T Consensus 269 i~~-~l~~~~-~-~~~~~v~~--~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~~tg 343 (478)
T 1nxc_A 269 IET-HLIRKS-S-GGLTYIAE--WKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRTYVK 343 (478)
T ss_dssp HHH-HTEEEC-T-TSCEEECE--EETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTSSSS
T ss_pred HHH-HhcccC-C-CCcEEEEe--ccCCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHhcccC
Confidence 653 443211 0 01111100 000 0 0233456899999998887776655556788877765 35555544
Q ss_pred C
Q 006861 454 Q 454 (628)
Q Consensus 454 ~ 454 (628)
.
T Consensus 344 l 344 (478)
T 1nxc_A 344 L 344 (478)
T ss_dssp S
T ss_pred C
Confidence 4
No 23
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=96.56 E-value=0.012 Score=63.39 Aligned_cols=188 Identities=11% Similarity=-0.017 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHhcCChHHHHH-HHHHHHHHHHHHhhc----CCcccccCCchhhhhhhh-cCCcccccchhhhhHHHHHH
Q 006861 184 HYLSASALMWASTHNESLKEK-MSAVVSALSACQKEI----GSGYLSAFPTEQFDRLEA-LIPVWAPYYTIHKILAGLLD 257 (628)
Q Consensus 184 ~~LsalA~~ya~t~D~~L~~k-~d~~Vd~l~~~Q~~~----~dGYl~~~~~~~~~r~~~-~~~~w~pyy~~Hki~aGLl~ 257 (628)
=++-++-.++..++|+++.+. +.++++.+.+.-+.. .... ..|- .+ .|.. ..-.|..=.+| |+..|+.
T Consensus 169 G~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~--~~pl-~~-~w~~~~~~G~aHG~aG--I~~~Ll~ 242 (411)
T 3e6u_A 169 GYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTA--KSPL-MY-EWYQEYYVGAAHGLAG--IYYYLMQ 242 (411)
T ss_dssp HHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTT--TCSC-CC-CBTTBCBCSTTTSHHH--HHHHHTC
T ss_pred HHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccC--CCCc-ce-eecCccCCcccccHHH--HHHHHHH
Confidence 367777777888888765443 566666666543210 1000 0000 00 0100 01112211122 4555666
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccc--c-ccccccccccc--chHHHHHHHHHHcCCHHHHHHHhhccccc
Q 006861 258 QYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSI--E-RHWQTLNEEAG--GMNDVLYKLFCITQDPKHLMLAHLFDKPC 332 (628)
Q Consensus 258 ~Y~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~--~-~~~~~l~~e~G--Gm~~~L~~LY~~TGd~ryL~lA~~f~~~~ 332 (628)
.++.+++++.++.+.+..+|+.+...+. ..++. . .......-.+| |+..++..+++.++|++|++.|....+..
T Consensus 243 ~~~~~~~~~~~~~i~~~l~~l~~~~~~~-g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~ 321 (411)
T 3e6u_A 243 PSLQVSQGKLHSLVKPSVDYVCQLKFPS-GNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVI 321 (411)
T ss_dssp GGGCCCHHHHHHTHHHHHHHHHHTCCTT-SCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHhhcChHHHHHHHHHHHHHHHHhhccC-CCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6778899999999999999998754221 11111 0 00011122344 78889999999999999999998753311
Q ss_pred ccchhhccCCCCCCCcccCCcchhhH--HHHHHHHhCChHHHHHHHHHHHHhhh
Q 006861 333 FLGLLALQADDISGFHSNTHIPIVIG--SQMRYEVTGDQLHKTISMFFMDIVNS 384 (628)
Q Consensus 333 ~~~~~~~~~d~l~g~hanthip~~~G--~a~~Y~~TGD~~y~~a~~~~~~~v~~ 384 (628)
+.. + .+...+...|...-.+ ..+.|+.|||+.|++.+..+.+.+.+
T Consensus 322 --~~~--g--~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~ 369 (411)
T 3e6u_A 322 --WQY--G--LLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLE 369 (411)
T ss_dssp --HHH--C--SBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTT
T ss_pred --Hhc--C--ccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 110 0 0011133455554333 66779999999999999888887764
No 24
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=95.86 E-value=0.76 Score=49.70 Aligned_cols=227 Identities=15% Similarity=0.081 Sum_probs=115.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcccccCCc-h-----hhhhhhh---cCCccc-----ccc-hhhhhHHHHHHHHHHc
Q 006861 198 NESLKEKMSAVVSALSACQKEIGSGYLSAFPT-E-----QFDRLEA---LIPVWA-----PYY-TIHKILAGLLDQYTYA 262 (628)
Q Consensus 198 D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~-~-----~~~r~~~---~~~~w~-----pyy-~~Hki~aGLl~~Y~~t 262 (628)
-+.+++.+..-+|.|+++|. ++|.+-.--. . .+.+-++ .|..+. |-- ..-..-++|-++++.-
T Consensus 89 ~~d~ldeikwg~D~llk~~~--~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~as~vf 166 (433)
T 1ks8_A 89 LDDGRKAVKWATDYFIKAHT--SQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVF 166 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--BTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHHHHhc
Confidence 37899999999999999998 6664321100 0 0111111 111110 100 1112334444555554
Q ss_pred CC------HHHHHHHHHHHHHHHHHhhhhhhccccccccccccccccc---hHHHHHHHHHHcCCHHHHHHHhhcccccc
Q 006861 263 DN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGG---MNDVLYKLFCITQDPKHLMLAHLFDKPCF 333 (628)
Q Consensus 263 G~------~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~GG---m~~~L~~LY~~TGd~ryL~lA~~f~~~~~ 333 (628)
.+ +++|+.|+++-+|..+.-+.... ....-.... ++.+- +..+-+|||+.|||++||+.++.+... +
T Consensus 167 k~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~--~~~~~~~~Y-~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~~-~ 242 (433)
T 1ks8_A 167 RNVDGTYSNNLLTHARQLFDFANNYRGKYSD--SITDARNFY-ASADYRDELVWAAAWLYRATNDNTYLNTAESLYDE-F 242 (433)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHSCCCHHH--HSGGGGGTS-CCCCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-T
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCCCcccC--CCCcCCCCC-CCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHh-c
Confidence 43 57899999999988653211100 000000000 11110 234668999999999999999875321 1
Q ss_pred cchhhccCCCCCCCcccCCcchhhHHH-HHHHHhCChHHHHHHHHHHHHhhhcCceeecCCCCCCCCCCCcccccCCCCC
Q 006861 334 LGLLALQADDISGFHSNTHIPIVIGSQ-MRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSN 412 (628)
Q Consensus 334 ~~~~~~~~d~l~g~hanthip~~~G~a-~~Y~~TGD~~y~~a~~~~~~~v~~~~~y~TGG~g~~E~f~~~~~L~~~~~~~ 412 (628)
. .........+.+ +..|.. .+.++++++.|++.++.+.+.+.....+--||..-...|
T Consensus 243 -~---~~~~~~~~~Wd~----~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W------------- 301 (433)
T 1ks8_A 243 -G---LQNWGGGLNWDS----KVSGVQVLLAKLTNKQAYKDTVQSYVNYLINNQQKTPKGLLYIDMW------------- 301 (433)
T ss_dssp -T---GGGSCCCCCSSC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCST-------------
T ss_pred -C---cCcCcCCcCccc----hhhHHHHHHhhccChHHHHHHHHHHHHHHHhcCCcCCCCceeecCC-------------
Confidence 0 000000001111 223433 345788999999999988887763221111221110011
Q ss_pred ccccchHHHHHHHHHHhhhc-cCCchhHHHHHHHHhhhhhcc
Q 006861 413 TEESCTTYNMLKVSRHLFRW-TKEIAYADYYERSLTNGVLGI 453 (628)
Q Consensus 413 ~~EtCas~~~l~~~~~L~~~-tgd~~YaD~~Er~lyN~ila~ 453 (628)
...=-+.+..+++-....+ +++.+|.+...+.+ |=|||.
T Consensus 302 -Gs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~ql-dYiLG~ 341 (433)
T 1ks8_A 302 -GTLRHAANAAFIMLEAAELGLSASSYRQFAQTQI-DYALGD 341 (433)
T ss_dssp -THHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHH-HHHHTT
T ss_pred -chhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhH-hhccCC
Confidence 1111122344444444556 78999999988876 788886
No 25
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=95.77 E-value=0.034 Score=61.50 Aligned_cols=243 Identities=14% Similarity=0.099 Sum_probs=128.9
Q ss_pred HHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHHc
Q 006861 185 YLSASALMWASTHN--ESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYA 262 (628)
Q Consensus 185 ~LsalA~~ya~t~D--~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~t 262 (628)
=|.-+..|+....+ +.+++..++.++.|.+...=..|+-++ .|+. ++ -++-||+.+|..+
T Consensus 54 SLDTL~IM~~~~~~~~~gl~~Ef~~A~~~V~~~l~F~~d~~Vs-----vFET------------tI-R~LGGLLSAy~Ls 115 (511)
T 1dl2_A 54 SVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVN-----VFET------------TI-RMLGGLLSAYHLS 115 (511)
T ss_dssp HHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHTCCCCCSSEEE-----HHHH------------HH-HHHHHHHHHHHHH
T ss_pred cccceEEeccccccccCCcHHHHHHHHHHHHHhcCCCCCceec-----hhhe------------eh-hhhhhhhhHHHhc
Confidence 34445554322211 367777777777776532201222222 2221 11 1578999999999
Q ss_pred ------CCHHHHHHHHHHHHHHHHHhhhhhhccccc-----------cccc---cccccccchHHHHHHHHHHcCCHHHH
Q 006861 263 ------DNAEALRMTTWMVEYFYNRVQNVIKKYSIE-----------RHWQ---TLNEEAGGMNDVLYKLFCITQDPKHL 322 (628)
Q Consensus 263 ------G~~kaL~ia~~~ad~~~~~~~~~~~~~~~~-----------~~~~---~l~~e~GGm~~~L~~LY~~TGd~ryL 322 (628)
|++.+|+.|+.++|.+..-|...+.+.+.. .++. ..-.|.|.+.+=+..|.++|||++|.
T Consensus 116 ~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~ 195 (511)
T 1dl2_A 116 DVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYW 195 (511)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHH
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHH
Confidence 999999999999999987775122222111 1111 11235566667788999999999999
Q ss_pred HHHhhcccc---------cccchhhccCCCCCCCcccCCcchh-------hHHHHHHHHhCChHHHHHHHHHHHHhhhcC
Q 006861 323 MLAHLFDKP---------CFLGLLALQADDISGFHSNTHIPIV-------IGSQMRYEVTGDQLHKTISMFFMDIVNSSH 386 (628)
Q Consensus 323 ~lA~~f~~~---------~~~~~~~~~~d~l~g~hanthip~~-------~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~ 386 (628)
+.|++..+. ...+-....-|..+|.....++-+- +=..+.|.+++|+.|++.=....+.|. +|
T Consensus 196 ~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a~~~i~-~~ 274 (511)
T 1dl2_A 196 ELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSMEGMK-KH 274 (511)
T ss_dssp HHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HH
Confidence 999886321 0101000111222222222222221 225677888899999887777777665 34
Q ss_pred ceeecCCCCCCCCCCCcc--cccCC-CCCccccchHHHHHHHHHHhhhcc---------CCchhHHHHHHHHhh
Q 006861 387 TYATGGTSVGEFWSDPKR--LASNL-DSNTEESCTTYNMLKVSRHLFRWT---------KEIAYADYYERSLTN 448 (628)
Q Consensus 387 ~y~TGG~g~~E~f~~~~~--L~~~~-~~~~~EtCas~~~l~~~~~L~~~t---------gd~~YaD~~Er~lyN 448 (628)
++-.. ...+-.|..... ..+.+ +....=+|-.-+|+-+... ..+. .+.+|.+..++.+.-
T Consensus 275 L~~~~-~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~~aLg~~-~~~~~~~a~~~~~~~~~~~~~a~~l~~t 346 (511)
T 1dl2_A 275 LLAQS-KPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGST-EGLSIHEARRRPFFSKSDWDLAKGITDT 346 (511)
T ss_dssp TEEEC-TTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHHHHHHHH-TTCCHHHHTTSTTCCHHHHHHHHHHHHH
T ss_pred hccCC-CCCCcEEEEEeecCCCCccccccchhhhchhHHHHhccc-cCCChhhhhhcccccHHHHHHHHHHHHH
Confidence 44211 011111110000 00011 1234568999888887752 2221 223577777666433
No 26
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=95.53 E-value=0.025 Score=62.06 Aligned_cols=197 Identities=18% Similarity=0.154 Sum_probs=109.5
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcc----cccchhhhhHHHHHHHHHHcC--C
Q 006861 191 LMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVW----APYYTIHKILAGLLDQYTYAD--N 264 (628)
Q Consensus 191 ~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w----~pyy~~Hki~aGLl~~Y~~tG--~ 264 (628)
++...|+|+++.++++++.+.|.+.|. .+|-++.+....-..|.+..-.+ -.|| --|+-+|..+| +
T Consensus 184 ~LS~lTGd~~Y~~~a~~~~~~l~~~~~--~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~d 255 (478)
T 1nxc_A 184 HLSHLSGDPVFAEKVMKIRTVLNKLDK--PEGLYPNYLNPSSGQWGQHHVSVGGLGDSFY------EYLLKAWLMSDKTD 255 (478)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHHHSCC--GGGCCCSEECTTTCCBCSCEECSSTTTHHHH------HHHHHHHHHTTTCC
T ss_pred HHHHHHCChHHHHHHHHHHHHHHhcCC--CCCccccccCCCCCCccCceeeecCCCchHH------HHHHHHHHHcCCch
Confidence 334489999999999999999988776 66765544211000111000000 1244 34567788887 5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh-hccc------cc--cc-cccccccccchHHHH-HHHHHHcCCHHHHHHHhhcccccc
Q 006861 265 AEALRMTTWMVEYFYNRVQNVI-KKYS------IE--RH-WQTLNEEAGGMNDVL-YKLFCITQDPKHLMLAHLFDKPCF 333 (628)
Q Consensus 265 ~kaL~ia~~~ad~~~~~~~~~~-~~~~------~~--~~-~~~l~~e~GGm~~~L-~~LY~~TGd~ryL~lA~~f~~~~~ 333 (628)
++++++-....+-+.+.+.... .+.. .. .+ ..-+.|-.|||- +| .++......++|+++|+.+.+.|.
T Consensus 256 ~~~~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~-aLg~~~~~~~~~~~~l~~a~~l~~tC~ 334 (478)
T 1nxc_A 256 LEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMF-ALGADGAPEARAQHYLELGAEIARTCH 334 (478)
T ss_dssp HHHHHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHH-HHTSTTSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHH-HhccccccccchHHHHHHHHHHHHHHH
Confidence 6888888888888877653210 0100 00 00 112345556662 22 222222234789999988654332
Q ss_pred ---------cchhhccCCCC---CCC-cccCC---cc-hhhHHHHHHHHhCChHHHHHHHHHHHHhhhcCceeecCCCCC
Q 006861 334 ---------LGLLALQADDI---SGF-HSNTH---IP-IVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVG 396 (628)
Q Consensus 334 ---------~~~~~~~~d~l---~g~-hanth---ip-~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~y~TGG~g~~ 396 (628)
+.|+...-+.- ... ....+ -| .++..-.+|++|||+.|++.+...++.+. ++.-+.+|.++-
T Consensus 335 ~~y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~-k~~r~~~G~a~i 413 (478)
T 1nxc_A 335 ESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALE-SHCRVNGGYSGL 413 (478)
T ss_dssp HHHHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHTEETTEECCB
T ss_pred HHHHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HHhhcccccccc
Confidence 22322111100 000 00111 22 36788889999999999999988888886 466666776653
Q ss_pred C
Q 006861 397 E 397 (628)
Q Consensus 397 E 397 (628)
.
T Consensus 414 ~ 414 (478)
T 1nxc_A 414 R 414 (478)
T ss_dssp S
T ss_pred c
Confidence 3
No 27
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=95.48 E-value=0.083 Score=58.61 Aligned_cols=195 Identities=17% Similarity=0.145 Sum_probs=107.6
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHH-hhcCCcccccCCchhhhhhhhc-CCcc----cccchhhhhHHHHHHHHHHcC--C
Q 006861 193 WASTHNESLKEKMSAVVSALSACQ-KEIGSGYLSAFPTEQFDRLEAL-IPVW----APYYTIHKILAGLLDQYTYAD--N 264 (628)
Q Consensus 193 ya~t~D~~L~~k~d~~Vd~l~~~Q-~~~~dGYl~~~~~~~~~r~~~~-~~~w----~pyy~~Hki~aGLl~~Y~~tG--~ 264 (628)
-..|+|+.+.++++++.+.|.+.| . .+|-++.+....-..|... .-.+ -.|| --|+-+|..+| +
T Consensus 248 S~LTGd~~Y~~~a~r~~~~l~~~~~~--~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~Y------EYLlK~~il~g~~d 319 (538)
T 1x9d_A 248 SRLTGDKKFQEAVEKVTQHIHGLSGK--KDGLVPMFINTHSGLFTHLGVFTLGARADSYY------EYLLKQWIQGGKQE 319 (538)
T ss_dssp HHHHCCTHHHHHHHHHHHHHHTCSCC--BTTBCCSEEETTTCCEESTTEECSSTTTHHHH------HHHHHHHHHTTSCC
T ss_pred HHHhCCcHHHHHHHHHHHHHHhcccC--CCCCcceEEeCCCCCccCCcceeecCCccHHH------HHHHHHHHHcCCch
Confidence 348999999999999999999877 4 5665554321100011100 0001 1244 45567888888 6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh--hcccc-----cc---c-cccccccccchHHHHHHHHHHcCCHHHHHHHhhccccc-
Q 006861 265 AEALRMTTWMVEYFYNRVQNVI--KKYSI-----ER---H-WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC- 332 (628)
Q Consensus 265 ~kaL~ia~~~ad~~~~~~~~~~--~~~~~-----~~---~-~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~- 332 (628)
++++++-....+-+.+.+.... ..... .+ + ..-+.|-.|||- +| --..-.+++|+++|+.+.+.|
T Consensus 320 ~~y~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~~~~~hL~cF~gG~~-aL--gg~~~~~~~~l~~a~~L~~tC~ 396 (538)
T 1x9d_A 320 TQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTL-AL--GVYHGLPASHMELAQELMETCY 396 (538)
T ss_dssp HHHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHH-HH--HHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccCcccchHhhhhhhHH-Hh--cCcccCcHHHHHHHHHHHHHHH
Confidence 7888888888887776652111 00000 00 0 112345556662 22 122346788999998764432
Q ss_pred --------ccchhhccCCC--------CCCCcccCCc---c-hhhHHHHHHHHhCChHHHHHHHHHHHHhhhcCceeecC
Q 006861 333 --------FLGLLALQADD--------ISGFHSNTHI---P-IVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGG 392 (628)
Q Consensus 333 --------~~~~~~~~~d~--------l~g~hanthi---p-~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~~~y~TGG 392 (628)
-+.|+...-+. ..-.....+- | .++..-.+|++|||+.|++.+-..++.+.++=-...||
T Consensus 397 ~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~Gg 476 (538)
T 1x9d_A 397 QMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGG 476 (538)
T ss_dssp HHHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTTSC
T ss_pred HHHHhcccCCCceEEEeccCCCccccceeeeccCcccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccccCC
Confidence 12232211110 0000011122 2 46788899999999999999988888887433333344
Q ss_pred CCCCCC
Q 006861 393 TSVGEF 398 (628)
Q Consensus 393 ~g~~E~ 398 (628)
+++-..
T Consensus 477 ya~i~d 482 (538)
T 1x9d_A 477 YSSINN 482 (538)
T ss_dssp BCCBSC
T ss_pred cccccc
Confidence 665433
No 28
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=95.46 E-value=0.1 Score=57.91 Aligned_cols=187 Identities=14% Similarity=0.080 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccccc-----------ccc--cccccccchHHHHHHHHHHcC
Q 006861 251 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIER-----------HWQ--TLNEEAGGMNDVLYKLFCITQ 317 (628)
Q Consensus 251 i~aGLl~~Y~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~-----------~~~--~l~~e~GGm~~~L~~LY~~TG 317 (628)
++-||+.+|..+|++.+|+.|+.++|.+..-|.. ..+.+... .|. ..-.|.|.+.+-+..|.++||
T Consensus 174 ~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdT-ptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTG 252 (538)
T 1x9d_A 174 ILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRT-PSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTG 252 (538)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-TTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHC
T ss_pred hhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcC-CCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhC
Confidence 5789999999999999999999999999766642 12211110 010 112345566677889999999
Q ss_pred CHHHHHHHhhcccc------cccchhhccCCCCCCCcccC-Ccchh-------hHHHHHHHHhC--ChHHHHHHHHHHHH
Q 006861 318 DPKHLMLAHLFDKP------CFLGLLALQADDISGFHSNT-HIPIV-------IGSQMRYEVTG--DQLHKTISMFFMDI 381 (628)
Q Consensus 318 d~ryL~lA~~f~~~------~~~~~~~~~~d~l~g~hant-hip~~-------~G~a~~Y~~TG--D~~y~~a~~~~~~~ 381 (628)
|++|.+.|++..+. ...+-....-|..+|...+. ++-+- +=..+.|.++| |+.|++.=....+.
T Consensus 253 d~~Y~~~a~r~~~~l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~a~~~ 332 (538)
T 1x9d_A 253 DKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAIEG 332 (538)
T ss_dssp CTHHHHHHHHHHHHHHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 99999999875321 01110000111112222122 22221 22567788898 78888776666666
Q ss_pred hhhcCceeecCCCCCCCCCCCccccc-C-CCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHH
Q 006861 382 VNSSHTYATGGTSVGEFWSDPKRLAS-N-LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 445 (628)
Q Consensus 382 v~~~~~y~TGG~g~~E~f~~~~~L~~-~-~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~ 445 (628)
+. +|++-...- .+-.|... +.+ . .+....-+|-.-+|+-+...++. +.+|.+..++.
T Consensus 333 i~-~~L~~~~~~-~~~~~v~~--~~~g~~~~~~~hL~cF~gG~~aLgg~~~~---~~~~l~~a~~L 391 (538)
T 1x9d_A 333 VR-THLLRHSEP-SKLTFVGE--LAHGRFSAKMDHLVCFLPGTLALGVYHGL---PASHMELAQEL 391 (538)
T ss_dssp HH-HHTEEECTT-TCCEEECE--EETTEEECEEEGGGGHHHHHHHHHHHTTC---CHHHHHHHHHH
T ss_pred HH-HHhccCCCC-CCceEEEe--ccCCccCcccchHhhhhhhHHHhcCcccC---cHHHHHHHHHH
Confidence 65 344322100 00011000 000 0 02334578999999998887643 45566666554
No 29
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=95.38 E-value=0.051 Score=58.50 Aligned_cols=123 Identities=15% Similarity=0.087 Sum_probs=79.8
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhh-hHHHHHHHHHHcCCHHH
Q 006861 189 SALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHK-ILAGLLDQYTYADNAEA 267 (628)
Q Consensus 189 lA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hk-i~aGLl~~Y~~tG~~ka 267 (628)
+..++..++|+++++.+...++.+.+.+. ++|.. |.... +.++.-.-+|.|-- |...++.+++.+++++.
T Consensus 240 Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~--~~g~w---p~~~~----~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~ 310 (411)
T 3e6u_A 240 LMQPSLQVSQGKLHSLVKPSVDYVCQLKF--PSGNY---PPCIG----DNRDLLVHWCHGAPGVIYMLIQAYKVFREEKY 310 (411)
T ss_dssp HTCGGGCCCHHHHHHTHHHHHHHHHHTCC--TTSCC---CSBTT----CCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHhhc--cCCCC---CCCCC----cccCccccccCCcHHHHHHHHHHHHHcCCHHH
Confidence 33334568899999999999999999887 67743 32110 01111111222211 44556688899999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccccccccccccc--chHHHHHHHHHHcCCHHHHHHHhhccc
Q 006861 268 LRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAG--GMNDVLYKLFCITQDPKHLMLAHLFDK 330 (628)
Q Consensus 268 L~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~G--Gm~~~L~~LY~~TGd~ryL~lA~~f~~ 330 (628)
++.+.+.++.+.++ .... .... -.+| |....|.++|+.|||++|++.|..|..
T Consensus 311 ~~~a~~~~~~~~~~--g~~~----~~~~----lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~ 365 (411)
T 3e6u_A 311 LCDAYQCADVIWQY--GLLK----KGYG----LCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAE 365 (411)
T ss_dssp HHHHHHHHHHHHHH--CSBT----TCSC----STTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--CccC----CCCc----eecChHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999988876543 1100 0100 1233 567899999999999999999988754
No 30
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=95.35 E-value=0.11 Score=56.94 Aligned_cols=195 Identities=15% Similarity=0.098 Sum_probs=108.0
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHH--h-hcCCcccccCCchhhhhhhhcCCccc----ccchhhhhHHHHHHHHHHcCCH
Q 006861 193 WASTHNESLKEKMSAVVSALSACQ--K-EIGSGYLSAFPTEQFDRLEALIPVWA----PYYTIHKILAGLLDQYTYADNA 265 (628)
Q Consensus 193 ya~t~D~~L~~k~d~~Vd~l~~~Q--~-~~~dGYl~~~~~~~~~r~~~~~~~w~----pyy~~Hki~aGLl~~Y~~tG~~ 265 (628)
-..|+|+.+.++++++.+.|.+.| . ...+|-++.+....-.+|....-.+. .|| --|+-+|..+|+.
T Consensus 175 S~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~ 248 (475)
T 2ri9_A 175 SDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFY------EYLIKMYVYDPKR 248 (475)
T ss_dssp HHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHH------HHHHHHHHHCTTT
T ss_pred HHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHH------HHHHHHHHHcCCc
Confidence 348999999999999999999876 1 01355544432110001111000111 244 4556788888875
Q ss_pred --HHHHHHHHHHHHHHHHhhhhh---hcccc-c-------cc-cccccccccchHHHHHHHHHHcCCHHHHHHHhhcccc
Q 006861 266 --EALRMTTWMVEYFYNRVQNVI---KKYSI-E-------RH-WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKP 331 (628)
Q Consensus 266 --kaL~ia~~~ad~~~~~~~~~~---~~~~~-~-------~~-~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~ 331 (628)
+++++-....+=+.+.+.... +.+.. . .+ ..-+.|-.|||- +|. -+.-++++|+++|+.+.+.
T Consensus 249 ~~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLg--g~~~~~~~~~~~a~~l~~t 325 (475)
T 2ri9_A 249 FETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSF-LLG--GTVLDRQDFIDFGLELVDG 325 (475)
T ss_dssp THHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHH-HHH--HHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHH-Hhc--ccccccHHHHHHHHHHHHH
Confidence 777777777777766543211 00000 0 00 112345556663 332 1234678999999887543
Q ss_pred cc---------cchhhccCCCC------------CCCcc----cCCcc-hhhHHHHHHHHhCChHHHHHHHHHHHHhhhc
Q 006861 332 CF---------LGLLALQADDI------------SGFHS----NTHIP-IVIGSQMRYEVTGDQLHKTISMFFMDIVNSS 385 (628)
Q Consensus 332 ~~---------~~~~~~~~d~l------------~g~ha----nthip-~~~G~a~~Y~~TGD~~y~~a~~~~~~~v~~~ 385 (628)
|+ +.|+...-+.- .++.. +---| .++..-.+|++|||+.|++.+...++.+. +
T Consensus 326 C~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai~-k 404 (475)
T 2ri9_A 326 CEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAIN-S 404 (475)
T ss_dssp HHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-H
Confidence 32 22322111000 01100 11122 45788888999999999999988888886 4
Q ss_pred CceeecCCCCCC
Q 006861 386 HTYATGGTSVGE 397 (628)
Q Consensus 386 ~~y~TGG~g~~E 397 (628)
+.-+-+|.++-.
T Consensus 405 ~~rt~~G~a~i~ 416 (475)
T 2ri9_A 405 TCRTDSGFAAVS 416 (475)
T ss_dssp HTBCSSSBCCBS
T ss_pred HHccccCCcccc
Confidence 565666666533
No 31
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=95.25 E-value=0.16 Score=55.67 Aligned_cols=189 Identities=11% Similarity=0.044 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHc-CC-----------HHHHHHHHHHHHHHHHHhhhhhhcccccc-------cc---ccccccccchHHH
Q 006861 251 ILAGLLDQYTYA-DN-----------AEALRMTTWMVEYFYNRVQNVIKKYSIER-------HW---QTLNEEAGGMNDV 308 (628)
Q Consensus 251 i~aGLl~~Y~~t-G~-----------~kaL~ia~~~ad~~~~~~~~~~~~~~~~~-------~~---~~l~~e~GGm~~~ 308 (628)
++-||+.+|..+ |+ +.+|+.|+.++|.+..-|.. +.+.+... .+ ...-.|.|.+.+=
T Consensus 92 ~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~T-ptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LE 170 (475)
T 2ri9_A 92 YLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDT-PSGVPYNNINITSHGNDGATTNGLAVTGTLVLE 170 (475)
T ss_dssp HHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHH
T ss_pred hHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCCCCceeecccCCCcCCCccchhccccceee
Confidence 578999999999 87 68999999999998766642 12211110 01 0112345566667
Q ss_pred HHHHHHHcCCHHHHHHHhhcccc----c------ccchhhccCCCCCCCcccCCcchh-------hHHHHHHHHhCCh--
Q 006861 309 LYKLFCITQDPKHLMLAHLFDKP----C------FLGLLALQADDISGFHSNTHIPIV-------IGSQMRYEVTGDQ-- 369 (628)
Q Consensus 309 L~~LY~~TGd~ryL~lA~~f~~~----~------~~~~~~~~~d~l~g~hanthip~~-------~G~a~~Y~~TGD~-- 369 (628)
+..|.++|||++|.+.|++..+. . ..+-....-|..+|.....++-+- +=..+.|.++|+.
T Consensus 171 F~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~ 250 (475)
T 2ri9_A 171 WTRLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRFE 250 (475)
T ss_dssp HHHHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCchH
Confidence 78999999999999999885321 0 101000001111222222222221 2256778889875
Q ss_pred HHHHHHHHHHHHhhhcCceeecCCCCCCCCCCCcccccC--CCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHHH
Q 006861 370 LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASN--LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 446 (628)
Q Consensus 370 ~y~~a~~~~~~~v~~~~~y~TGG~g~~E~f~~~~~L~~~--~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~l 446 (628)
.|++.=....+.+. +|+.-......+-.|... ..+. .+....=+|-.-+|+-+...++. ..+|.+..++..
T Consensus 251 ~~~~m~~~a~~~i~-~~l~~~~~~~~~~~~v~~--~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~l~ 323 (475)
T 2ri9_A 251 TYKDRWVLAAESTI-KHLKSHPKSRPDLTFLSS--YSNRNYDLSSQHLTCFDGGSFLLGGTVLD---RQDFIDFGLELV 323 (475)
T ss_dssp HHHHHHHHHHHHHH-HHTEECCSSCTTCCEECE--EETTEEECEEETGGGGHHHHHHHHHHHHT---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHhccCCCCCCCceEEEe--ccCCccccccchHHHhHHHHHHhcccccc---cHHHHHHHHHHH
Confidence 67665555555554 233321100000001000 0000 02334568999999999887654 566777766654
No 32
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=95.10 E-value=1.7 Score=47.12 Aligned_cols=228 Identities=13% Similarity=0.056 Sum_probs=113.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcccccC-Cch-----hhhhhhh---cCCc-cc-----ccchh-hhhHHHHHHHHHH
Q 006861 198 NESLKEKMSAVVSALSACQKEIGSGYLSAF-PTE-----QFDRLEA---LIPV-WA-----PYYTI-HKILAGLLDQYTY 261 (628)
Q Consensus 198 D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~-~~~-----~~~r~~~---~~~~-w~-----pyy~~-Hki~aGLl~~Y~~ 261 (628)
-+.+++.+..-+|.|++++. .+|.+-.- ... .+.+-++ .|.. |. |--.. -..-++|-++++.
T Consensus 91 ~~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAalAaas~v 168 (441)
T 1ia6_A 91 TTKMLQQLKYFTDYFLKSHP--NSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAALTLMYLN 168 (441)
T ss_dssp HHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHHHHHHHHh
Confidence 37888999999999999965 44422110 000 0111111 1111 10 10010 1233444455555
Q ss_pred cCC------HHHHHHHHHHHHHHHHHhhhhhhccccccc-cc-cccccccchHHHHHHHHHHcCCHHHHHHHhhcccccc
Q 006861 262 ADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERH-WQ-TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF 333 (628)
Q Consensus 262 tG~------~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~-~~-~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~~ 333 (628)
-.+ +++|+.|+++-+|..+.-+ . ....+. .. ....| +..+-+|||+.|||++||+.++.+.....
T Consensus 169 fk~~D~~yA~~~L~~A~~~~~fa~~~~g-~---~~~~~~Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~~ 241 (441)
T 1ia6_A 169 YKNIDSAYATKCLNAAKELYAMGKANQG-V---GNGQSFYQATSFGDD---LAWAATWLYTATNDSTYITDAEQFITLGN 241 (441)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHSCS-C---CCCTTTSCCCCSHHH---HHHHHHHHHHHHCCTHHHHHHHHHTTC--
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHcCC-C---CCCCCCCCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Confidence 443 5789999999988865311 1 000000 00 01112 23566899999999999999987533210
Q ss_pred cchhhccCCCCCCCcccCCcchhhHHHH-HHHHhCChHHHHHHHHHHHHhhhcCceeecCCCCCCCCCCCcccccCCCCC
Q 006861 334 LGLLALQADDISGFHSNTHIPIVIGSQM-RYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSN 412 (628)
Q Consensus 334 ~~~~~~~~d~l~g~hanthip~~~G~a~-~Y~~TGD~~y~~a~~~~~~~v~~~~~y~TGG~g~~E~f~~~~~L~~~~~~~ 412 (628)
..........+.+.-. .+..|... +.++++++.|++.++.+.+.....-.+--||..-.-.|
T Consensus 242 --~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W------------- 304 (441)
T 1ia6_A 242 --TMNENKMQDKWTMCWD--DMYVPAALRLAQITGKQIYKDAIEFNFNYWKTQVTTTPGGLKWLSNW------------- 304 (441)
T ss_dssp ------CGGGCSSCSSSS--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCST-------------
T ss_pred --hcccccccCCCcCCcc--chHHHHHHHHHhccCcHHHHHHHHHHHHHHHhhcccCCCCceecCCc-------------
Confidence 0000000000111101 12344433 46778999999988887765542111222343311111
Q ss_pred ccccchHHHHHHHHHHhhhccCCchhHHHHHHHHhhhhhcc
Q 006861 413 TEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGI 453 (628)
Q Consensus 413 ~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~lyN~ila~ 453 (628)
...=-+.++.+++..-..++++.+|.+...+.+ |=|||.
T Consensus 305 -Gs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~ql-dYiLG~ 343 (441)
T 1ia6_A 305 -GVLRYAAAESMVMLVYCKQNPDQSLLDLAKKQV-DYILGD 343 (441)
T ss_dssp -THHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHH-HHHHTC
T ss_pred -chHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHhcCC
Confidence 010111344444444456788999999998876 778875
No 33
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=95.08 E-value=0.13 Score=56.63 Aligned_cols=189 Identities=14% Similarity=0.036 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHcCCH------------HHHHHHHHHHHHHHHHhhhhhhccccc--------ccc---ccccccccchHH
Q 006861 251 ILAGLLDQYTYADNA------------EALRMTTWMVEYFYNRVQNVIKKYSIE--------RHW---QTLNEEAGGMND 307 (628)
Q Consensus 251 i~aGLl~~Y~~tG~~------------kaL~ia~~~ad~~~~~~~~~~~~~~~~--------~~~---~~l~~e~GGm~~ 307 (628)
++-||+.+|..+|++ .+|+.|+.+||.+..-|.. +.+.+.. ..+ ...-.|.|.+.+
T Consensus 105 ~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdT-ptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~L 183 (503)
T 1hcu_A 105 YLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTT-PSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVL 183 (503)
T ss_dssp HHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSCCCSEEECSSSCEECCCSEEEHHHHTTSHH
T ss_pred hHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCCCcceeecccCCCCCCCCccccccccceee
Confidence 578999999999984 8999999999998766642 1221111 001 111235566667
Q ss_pred HHHHHHHHcCCHHHHHHHhhcccc----c-----ccchhhccCCCCCCCcccCCcchh-------hHHHHHHHHhCCh--
Q 006861 308 VLYKLFCITQDPKHLMLAHLFDKP----C-----FLGLLALQADDISGFHSNTHIPIV-------IGSQMRYEVTGDQ-- 369 (628)
Q Consensus 308 ~L~~LY~~TGd~ryL~lA~~f~~~----~-----~~~~~~~~~d~l~g~hanthip~~-------~G~a~~Y~~TGD~-- 369 (628)
=+..|.++|||++|.+.|++..+. . ..+-....-|..+|.....++-+- +=..+.|.++|+.
T Consensus 184 EF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~ 263 (503)
T 1hcu_A 184 EWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVAFA 263 (503)
T ss_dssp HHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTTTH
T ss_pred ehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHHHHHHcCCchH
Confidence 788999999999999999885321 0 001000001111122212222211 1256778889875
Q ss_pred HHHHHHHHHHHHhhhcCceeecCCCCCCCCCCCcccccC--CCCCccccchHHHHHHHHHHhhhccCCchhHHHHHHHH
Q 006861 370 LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASN--LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 446 (628)
Q Consensus 370 ~y~~a~~~~~~~v~~~~~y~TGG~g~~E~f~~~~~L~~~--~~~~~~EtCas~~~l~~~~~L~~~tgd~~YaD~~Er~l 446 (628)
.|++.=....+.+. +|+.-......+-.|... +.+. .+....=+|-.-+|+-+.-.++. ..+|.+..++..
T Consensus 264 ~y~~m~~~a~~~i~-~~l~~~~~~~~~~~~v~~--~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~L~ 336 (503)
T 1hcu_A 264 HYKDRWVLGADSTI-GHLGSHPSTRKDLTFLSS--YNGQSTSPNSGHLASFGGGNFILGGILLN---EQKYIDFGIKLA 336 (503)
T ss_dssp HHHHHHHHHHHHHH-HHTEECBTTCTTCCEECE--EETTEEESEEEGGGGGHHHHHHHHHHHHT---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHhccCCCCCCCceEEEe--ccCCccccccchhhhhhhHHHHhcCcccc---cHHHHHHHHHHH
Confidence 67665555555554 233321100000011000 0010 02334578999999999887654 556777766654
No 34
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=94.70 E-value=0.14 Score=56.53 Aligned_cols=192 Identities=14% Similarity=0.072 Sum_probs=105.9
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHhh--cCCcccccCCchhhhhhhhcCCcc----cccchhhhhHHHHHHHHHHcCCHH
Q 006861 193 WASTHNESLKEKMSAVVSALSACQKE--IGSGYLSAFPTEQFDRLEALIPVW----APYYTIHKILAGLLDQYTYADNAE 266 (628)
Q Consensus 193 ya~t~D~~L~~k~d~~Vd~l~~~Q~~--~~dGYl~~~~~~~~~r~~~~~~~w----~pyy~~Hki~aGLl~~Y~~tG~~k 266 (628)
-..|+|+.+.++++++.+.|.+.|.. ..+|-++.+....-..|....-.+ -.|| --|+-+|..+++++
T Consensus 186 S~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~Y------EYLlK~~il~~d~~ 259 (511)
T 1dl2_A 186 AYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFY------EYLLKQYLLTHETL 259 (511)
T ss_dssp HHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHH------HHHHHHHHHHCCHH
T ss_pred HHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHH------HHHHHHHHhcCCHH
Confidence 34799999999999999999998821 156765544211000111100001 1244 34567788889999
Q ss_pred HHHHHHHHHHHHHHHhhhhh--hc------cc--ccc----ccccccccccchHHHHHHHHH---------HcCCHHHHH
Q 006861 267 ALRMTTWMVEYFYNRVQNVI--KK------YS--IER----HWQTLNEEAGGMNDVLYKLFC---------ITQDPKHLM 323 (628)
Q Consensus 267 aL~ia~~~ad~~~~~~~~~~--~~------~~--~~~----~~~~l~~e~GGm~~~L~~LY~---------~TGd~ryL~ 323 (628)
++++-....+-+.+.+.... .. .. ..+ ...-+.|-.||| .+|.-... ...+++|++
T Consensus 260 y~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~-~aLg~~~~~~~~~a~~~~~~~~~~~~ 338 (511)
T 1dl2_A 260 YYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGL-LASGSTEGLSIHEARRRPFFSKSDWD 338 (511)
T ss_dssp HHHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHH-HHHHHHTTCCHHHHTTSTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHH-HHhccccCCChhhhhhcccccHHHHH
Confidence 99988888888877653211 00 00 000 011234555665 23321101 112458999
Q ss_pred HHhhcccccc---------cchhhccCCCCC------------C--Cc-c---cCCcc-hhhHHHHHHHHhCChHHHHHH
Q 006861 324 LAHLFDKPCF---------LGLLALQADDIS------------G--FH-S---NTHIP-IVIGSQMRYEVTGDQLHKTIS 375 (628)
Q Consensus 324 lA~~f~~~~~---------~~~~~~~~d~l~------------g--~h-a---nthip-~~~G~a~~Y~~TGD~~y~~a~ 375 (628)
+|+.+.+.|+ +.|+...-+.-. . .+ . +-.-| .++..-.+|++|||+.|++.+
T Consensus 339 ~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~y~LRPE~iES~fylyR~TgD~~yre~g 418 (511)
T 1dl2_A 339 LAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWG 418 (511)
T ss_dssp HHHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCcccCcCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 9988744332 222221100000 0 00 0 11122 457888899999999999999
Q ss_pred HHHHHHhhhcCceeecC
Q 006861 376 MFFMDIVNSSHTYATGG 392 (628)
Q Consensus 376 ~~~~~~v~~~~~y~TGG 392 (628)
...++.+. ++.-+..|
T Consensus 419 w~~f~ai~-k~~rt~~G 434 (511)
T 1dl2_A 419 AEIATSFF-ENTCVDCN 434 (511)
T ss_dssp HHHHHHHH-HHHEESTT
T ss_pred HHHHHHHH-HHhccccC
Confidence 88888886 45555554
No 35
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=94.47 E-value=0.15 Score=56.32 Aligned_cols=195 Identities=16% Similarity=0.133 Sum_probs=107.9
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHh--hcCCcccccCCchhhhhhhhcCCcc----cccchhhhhHHHHHHHHHHcCCH-
Q 006861 193 WASTHNESLKEKMSAVVSALSACQK--EIGSGYLSAFPTEQFDRLEALIPVW----APYYTIHKILAGLLDQYTYADNA- 265 (628)
Q Consensus 193 ya~t~D~~L~~k~d~~Vd~l~~~Q~--~~~dGYl~~~~~~~~~r~~~~~~~w----~pyy~~Hki~aGLl~~Y~~tG~~- 265 (628)
-..|+|+.+.++++++.+.|.+.|. ...+|-++.+....-.+|....-.+ -.|| --|+-+|..+|+.
T Consensus 189 S~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~~ 262 (503)
T 1hcu_A 189 SDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFY------EYLIKMYLYDPVAF 262 (503)
T ss_dssp HHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHH------HHHHHHHHHCTTTT
T ss_pred HHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHH------HHHHHHHHHcCCch
Confidence 3489999999999999999987663 1145554433210000111000001 1244 4556788888875
Q ss_pred -HHHHHHHHHHHHHHHHhhhhh---hcccc-c-------cc-cccccccccchHHHHHHHHHHcCCHHHHHHHhhccccc
Q 006861 266 -EALRMTTWMVEYFYNRVQNVI---KKYSI-E-------RH-WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC 332 (628)
Q Consensus 266 -kaL~ia~~~ad~~~~~~~~~~---~~~~~-~-------~~-~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~ 332 (628)
+++++-....+-+.+.+.... +.+.. . .+ ..-+.|-.|||- +|. -+.-++++|+++|+.+.+.|
T Consensus 263 ~~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLg--g~~~~~~~~~~~a~~L~~tC 339 (503)
T 1hcu_A 263 AHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNF-ILG--GILLNEQKYIDFGIKLASSY 339 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHH-HHH--HHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHH-Hhc--CcccccHHHHHHHHHHHHHH
Confidence 777777777777766543211 00000 0 00 112345556662 332 12346889999998765433
Q ss_pred c---------cchhhccCCCCC------------------CCcc----cCCcc-hhhHHHHHHHHhCChHHHHHHHHHHH
Q 006861 333 F---------LGLLALQADDIS------------------GFHS----NTHIP-IVIGSQMRYEVTGDQLHKTISMFFMD 380 (628)
Q Consensus 333 ~---------~~~~~~~~d~l~------------------g~ha----nthip-~~~G~a~~Y~~TGD~~y~~a~~~~~~ 380 (628)
+ +.|+...-+.-. ++.. +-.-| .++..-.+|++|||+.|++.+...++
T Consensus 340 ~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~if~ 419 (503)
T 1hcu_A 340 FGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALS 419 (503)
T ss_dssp HHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHHHH
T ss_pred HHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 2 222221110000 1100 11112 45778888999999999999988888
Q ss_pred HhhhcCceeecCCCCCC
Q 006861 381 IVNSSHTYATGGTSVGE 397 (628)
Q Consensus 381 ~v~~~~~y~TGG~g~~E 397 (628)
.+. ++.-+-.|.++-.
T Consensus 420 ai~-k~~r~~~Gya~i~ 435 (503)
T 1hcu_A 420 AIE-DACRAGSAYSSIN 435 (503)
T ss_dssp HHH-HHHEETTEECCBS
T ss_pred HHH-HHHhhccCCcccc
Confidence 886 5666666666533
No 36
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=94.34 E-value=0.82 Score=48.53 Aligned_cols=179 Identities=7% Similarity=-0.144 Sum_probs=94.5
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCC---cccccCCc---hh-hhhhhh--cCCcccccchhhhhHHHHHHHH
Q 006861 189 SALMWASTHNESLKEKMSAVVSALSACQKEIGS---GYLSAFPT---EQ-FDRLEA--LIPVWAPYYTIHKILAGLLDQY 259 (628)
Q Consensus 189 lA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~d---GYl~~~~~---~~-~~r~~~--~~~~w~pyy~~Hki~aGLl~~Y 259 (628)
+..++-...++...+.+.++++.|.+.++ .+. ||..+... +. ...+.. ..-.++.=.++ |..-|..+|
T Consensus 143 i~~~Ll~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aG--i~~~L~~~~ 219 (409)
T 2g0d_A 143 ILSYLLLINDEQYDDLKILIINFLSNLTK-ENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAG--VGCILAYAH 219 (409)
T ss_dssp HHHHHTTCCCGGGHHHHHHHHHHHHHTTS-CCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHH--HHHHHHHHH
T ss_pred HHHHHHHccCchhHHHHHHHHHHHHHHHh-cCCCCCceeecCCccccchhhhcCCCCCccCCchhhHHH--HHHHHHHHH
Confidence 44444344577788888888888887654 122 22221100 00 000110 00111111112 343333444
Q ss_pred HHcC--CHHHHHHHHHHHHHHHHHhhh-hhhc-ccc---c-----------ccccccccccc--chHHHHHHHHHHcCCH
Q 006861 260 TYAD--NAEALRMTTWMVEYFYNRVQN-VIKK-YSI---E-----------RHWQTLNEEAG--GMNDVLYKLFCITQDP 319 (628)
Q Consensus 260 ~~tG--~~kaL~ia~~~ad~~~~~~~~-~~~~-~~~---~-----------~~~~~l~~e~G--Gm~~~L~~LY~~TGd~ 319 (628)
.+| +++.++.+.+.++|+.+.... .... ++. . .......-.+| |+..++..+|+.++|+
T Consensus 220 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d~ 298 (409)
T 2g0d_A 220 -IKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDND 298 (409)
T ss_dssp -HHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCH
T ss_pred -HhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCCH
Confidence 455 899999999999999654221 0011 110 0 00001112344 7888999999999999
Q ss_pred HHHHHHhhcccccccchhhccCCCCCCCcccCCcchhhH--HHHHHHHhCChHHHHHHHH
Q 006861 320 KHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIG--SQMRYEVTGDQLHKTISMF 377 (628)
Q Consensus 320 ryL~lA~~f~~~~~~~~~~~~~d~l~g~hanthip~~~G--~a~~Y~~TGD~~y~~a~~~ 377 (628)
+|++.|+...+..... ......+...|...-++ ....|+.|+|++|++.+..
T Consensus 299 ~~~~~a~~~~~~~~~~------~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~ 352 (409)
T 2g0d_A 299 YFVDKAEKILESAMQR------KLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEE 352 (409)
T ss_dssp HHHHHHHHHHHHHHHH------CTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHh------ccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999998764322110 00111133455554333 5677999999999887765
No 37
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=93.60 E-value=3.3 Score=46.78 Aligned_cols=175 Identities=12% Similarity=0.079 Sum_probs=89.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcccccC-Cc-----hhhhhhhh---cCCccc-----ccchh-hhhHHHHHHHHHHc
Q 006861 198 NESLKEKMSAVVSALSACQKEIGSGYLSAF-PT-----EQFDRLEA---LIPVWA-----PYYTI-HKILAGLLDQYTYA 262 (628)
Q Consensus 198 D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~-~~-----~~~~r~~~---~~~~w~-----pyy~~-Hki~aGLl~~Y~~t 262 (628)
-+.+++.+..-.|.|++++. .+|.+-.- .. ..|.+-+. .+..+. |--.. -..-|+|-++++.-
T Consensus 90 ~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAlAaAS~vf 167 (614)
T 1g87_A 90 TKYIMDGIKWANDYFIKCNP--TPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVF 167 (614)
T ss_dssp HHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcc--CCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHHHHHHHhc
Confidence 36889999999999999965 44422110 00 01111111 111110 10011 11334444555554
Q ss_pred CC------HHHHHHHHHHHHHHHHHhhhhhhccccccc-cc-cccccccchHHHHHHHHHHcCCHHHHHHHhhccccccc
Q 006861 263 DN------AEALRMTTWMVEYFYNRVQNVIKKYSIERH-WQ-TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFL 334 (628)
Q Consensus 263 G~------~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~-~~-~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~~~ 334 (628)
.+ +++|+.|+++-+|..+.-+.. ......+. .. ....| +..+-+|||+.|||++||+.|+.+....
T Consensus 168 k~~D~~yA~~~L~~Ak~l~~fA~~~~~~~-~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~~-- 241 (614)
T 1g87_A 168 KSSDPTYAEKCISHAKNLFDMADKAKSDA-GYTAASGYYSSSSFYDD---LSWAAVWLYLATNDSTYLDKAESYVPNW-- 241 (614)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHCCCT-TCCTTTTTSCCSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTGGGS--
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHcCCCC-CCCcCcCCcCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHHhh--
Confidence 43 688999999999987643211 00000000 00 00111 2346689999999999999998754321
Q ss_pred chhhccCC--CCCCCcccCCcchhhHHHHH-HHHhCChHHHHHHHHHHHHhh
Q 006861 335 GLLALQAD--DISGFHSNTHIPIVIGSQMR-YEVTGDQLHKTISMFFMDIVN 383 (628)
Q Consensus 335 ~~~~~~~d--~l~g~hanthip~~~G~a~~-Y~~TGD~~y~~a~~~~~~~v~ 383 (628)
.. ..+.. ...+.+.=. .+..|+..+ .++++++.|++.++.+.+...
T Consensus 242 ~~-~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 290 (614)
T 1g87_A 242 GK-EQQTDIIAYKWGQCWD--DVHYGAELLLAKLTNKQLYKDSIEMNLDFWT 290 (614)
T ss_dssp CB-CTTSSSBCCSSCCBTT--BCHHHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred cc-ccccccccccCCcCcc--chHHHHHHHHHhccCcHHHHHHHHHHHHHhh
Confidence 10 00000 000111101 124565544 788999999998888877554
No 38
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=93.50 E-value=4.4 Score=44.18 Aligned_cols=174 Identities=13% Similarity=0.107 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCcccccC-Cch-----hhhhhhh---cCCccc-----ccchh-hhhHHHHHHHHHHcC
Q 006861 199 ESLKEKMSAVVSALSACQKEIGSGYLSAF-PTE-----QFDRLEA---LIPVWA-----PYYTI-HKILAGLLDQYTYAD 263 (628)
Q Consensus 199 ~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~-~~~-----~~~r~~~---~~~~w~-----pyy~~-Hki~aGLl~~Y~~tG 263 (628)
+.+++.+..-.|.|++++. .+|-+-.- ... .|.+-+. .++.+. |--.. -..-|+|-++++.-.
T Consensus 112 ~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AAAlAaAS~vfk 189 (466)
T 2xfg_A 112 NHILNNIKWACDYFIKCHP--EKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFK 189 (466)
T ss_dssp HHHHHHHHHHHHHHHHTCS--BTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHHHHHHHHHhcc
Confidence 6899999999999999965 33322111 000 0111111 111110 11111 123344445556554
Q ss_pred C------HHHHHHHHHHHHHHHHHhhhhhhccccccc---cccccccccchHHHHHHHHHHcCCHHHHHHHhhccccccc
Q 006861 264 N------AEALRMTTWMVEYFYNRVQNVIKKYSIERH---WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFL 334 (628)
Q Consensus 264 ~------~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~---~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~~~ 334 (628)
+ +++|+.|+++-+|..+.-+.. ......+. +.....| +..+-+|||+.|||++||+.++.+....
T Consensus 190 ~~D~~yA~~~L~~Ak~l~~fA~~~~~~~-~~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~~-- 263 (466)
T 2xfg_A 190 KVDGEYSKECLKHAKELFEFADTTKSDD-GYTAANGFYNSWSGFYDE---LSWAAVWLYLATNDSSYLDKAESYSDKW-- 263 (466)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHCCCT-TCCTTTTTSCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTTTTS--
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhcCCcC-CCCccccccCCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHHh--
Confidence 3 588999999999986643211 00000000 0001112 2346689999999999999998753221
Q ss_pred chhhccCC--CCCCCcccCCcchhhHHHH-HHHHhCCh-HHHHHHHHHHHHhh
Q 006861 335 GLLALQAD--DISGFHSNTHIPIVIGSQM-RYEVTGDQ-LHKTISMFFMDIVN 383 (628)
Q Consensus 335 ~~~~~~~d--~l~g~hanthip~~~G~a~-~Y~~TGD~-~y~~a~~~~~~~v~ 383 (628)
.. ..+.. ...+.+.= -.+..|+.+ +.++++++ .|++.++.+.+...
T Consensus 264 ~~-~~~~~~~~~~~~~~W--d~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ 313 (466)
T 2xfg_A 264 GY-EPQTNIPKYKWAQCW--DDVTYGTYLLLARIKNDNGKYKEAIERHLDWWT 313 (466)
T ss_dssp CB-STTSSSBCCSSCCBT--TBCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT
T ss_pred cc-ccccccccccCcCCc--chhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 10 00000 00011110 113456555 36778877 89888888777654
No 39
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=90.85 E-value=7.7 Score=43.65 Aligned_cols=177 Identities=13% Similarity=-0.016 Sum_probs=88.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcccccCCc------hhhhhhhh---cCCccc-----ccc-hhhhhHHHHHHHHHHc
Q 006861 198 NESLKEKMSAVVSALSACQKEIGSGYLSAFPT------EQFDRLEA---LIPVWA-----PYY-TIHKILAGLLDQYTYA 262 (628)
Q Consensus 198 D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~------~~~~r~~~---~~~~w~-----pyy-~~Hki~aGLl~~Y~~t 262 (628)
-+.+++.+..-.|.|+++|. .+|.|-.--. ..|.+-+. .++.+. |-- ..-..-|+|-++++.-
T Consensus 90 ~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlAaAS~vf 167 (605)
T 1tf4_A 90 MPYLKDNLRWVNDYFIKAHP--SPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVF 167 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--BTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcc--CCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHHHHHHhhc
Confidence 36789999999999999987 4443211100 01111111 112111 000 0112344444555554
Q ss_pred CC------HHHHHHHHHHHHHHHHHhhhhhhcccccccccccccc-ccc---hHHHHHHHHHHcCCHHHHHHHhhccccc
Q 006861 263 DN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEE-AGG---MNDVLYKLFCITQDPKHLMLAHLFDKPC 332 (628)
Q Consensus 263 G~------~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e-~GG---m~~~L~~LY~~TGd~ryL~lA~~f~~~~ 332 (628)
.+ +++|+.|+++-+|..+.-+. +....-....-++ .|- +..+-+|||+.|||++||+.|+.+....
T Consensus 168 k~~D~~yA~~~L~~Ak~~~~fA~~~~g~----y~~~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~ 243 (605)
T 1tf4_A 168 ADDDPAYAATLVQHAKQLYTFADTYRGV----YSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFL 243 (605)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHSCCC----GGGTSTTHHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGGGS
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHcCCC----cCCCCCccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 43 57899999999888653111 1100000000011 110 2346689999999999999998753321
Q ss_pred ccchhhccCCCCCCCcccCCcchhhHHHH-HHHHhCChHHHHHHHHHHHHhh
Q 006861 333 FLGLLALQADDISGFHSNTHIPIVIGSQM-RYEVTGDQLHKTISMFFMDIVN 383 (628)
Q Consensus 333 ~~~~~~~~~d~l~g~hanthip~~~G~a~-~Y~~TGD~~y~~a~~~~~~~v~ 383 (628)
-..... ......+.+.=. .+..|... +.++++++.|++.++.+.+...
T Consensus 244 ~~~~~~-~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~y~~~a~~~~~~~~ 292 (605)
T 1tf4_A 244 STEQQT-DLRSYRWTIAWD--DKSYGTYVLLAKETGKQKYIDDANRWLDYWT 292 (605)
T ss_dssp CBCTTS-SCBCCSSCCSSS--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHTT
T ss_pred cccccc-cccccccccccc--chHHHHHHHHHhccChHHHHHHHHHHHHHHh
Confidence 000000 000000111101 12345444 3678999999999988887653
No 40
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=90.16 E-value=1 Score=50.53 Aligned_cols=188 Identities=11% Similarity=0.082 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHh-----cCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHH
Q 006861 183 GHYLSASALMWAS-----THNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLD 257 (628)
Q Consensus 183 G~~LsalA~~ya~-----t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~ 257 (628)
|-..-|+|.+..+ ...+++.+.+++..+.+.+.... |...-.....| -|| .+- |.+.
T Consensus 253 gl~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~~----y~~~g~~~~~D----------e~~---~~W-AA~e 314 (586)
T 3h7l_A 253 GVAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNTQ----YLNDGEENIID----------EYC---ALL-ASVE 314 (586)
T ss_dssp HHHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHHH----HSTTSCCCHHH----------HHH---HHH-HHHH
T ss_pred HHHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCcc----ccCCCCccchh----------HHH---HHH-HHHH
Confidence 4444455544444 23467888888888887776542 22111111111 121 134 4459
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhhhhhhccccccccc--------cccccccchH-HHHHHHHHHcCCHHHHHHHhhc
Q 006861 258 QYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQ--------TLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLF 328 (628)
Q Consensus 258 ~Y~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~--------~l~~e~GGm~-~~L~~LY~~TGd~ryL~lA~~f 328 (628)
.|++||++++|+.+...++.+..++...... .-.|. ..+....|+. .+|++|.++++|+++.+.|+..
T Consensus 315 Ly~ATgd~~YL~~a~~~a~~l~~~~~~~~~~---g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~ 391 (586)
T 3h7l_A 315 LFKATKETRYLEESRLWAQRLVARQMSDEQI---QHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCI 391 (586)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHTTEECCSSC---SSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhccCCccC---CCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHH
Confidence 9999999999999999999887665321000 01121 0111222343 6889999999987554444332
Q ss_pred cccccc--------------ch--hh-----ccCCCCCCCccc-----CCcch------hhHHHHHHHHhCC----hHHH
Q 006861 329 DKPCFL--------------GL--LA-----LQADDISGFHSN-----THIPI------VIGSQMRYEVTGD----QLHK 372 (628)
Q Consensus 329 ~~~~~~--------------~~--~~-----~~~d~l~g~han-----thip~------~~G~a~~Y~~TGD----~~y~ 372 (628)
...... .+ .. ..++...-.|.+ -|... ++=++..|.+++| ++|+
T Consensus 392 i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~ 471 (586)
T 3h7l_A 392 VNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPHIASQEIQQQLS 471 (586)
T ss_dssp HHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHH
T ss_pred HHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHH
Confidence 211110 00 00 000110001111 11111 1124445788999 8999
Q ss_pred HHHHHHHHHhhhcC----ceeec
Q 006861 373 TISMFFMDIVNSSH----TYATG 391 (628)
Q Consensus 373 ~a~~~~~~~v~~~~----~y~TG 391 (628)
+.+..-+|.|..+. +|+||
T Consensus 472 ~~a~~qldyiLG~Np~~~s~v~G 494 (586)
T 3h7l_A 472 VFAQDALNWIVGLNPYDMCMLDG 494 (586)
T ss_dssp HHHHHHHHHHBTCSTTCCBCBTT
T ss_pred HHHHHhhhhhccCCCCCCccEEe
Confidence 99999999887643 67776
No 41
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=88.95 E-value=2 Score=45.48 Aligned_cols=127 Identities=13% Similarity=0.005 Sum_probs=76.2
Q ss_pred HHHHHHHhc-CChHHHHHHHHHHHHHHHHHhhcCCcccccCCc-hh-hhhh--------hhcCCcccccchhhhhHHHHH
Q 006861 188 ASALMWAST-HNESLKEKMSAVVSALSACQKEIGSGYLSAFPT-EQ-FDRL--------EALIPVWAPYYTIHKILAGLL 256 (628)
Q Consensus 188 alA~~ya~t-~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~-~~-~~r~--------~~~~~~w~pyy~~Hki~aGLl 256 (628)
.++.++... .|+.+++.+.+.++.+.+.+...++|-. +|. .. .+.. ......|--=-.| |...++
T Consensus 214 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~--wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~G--i~~~l~ 289 (409)
T 2g0d_A 214 ILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFL--WKDGLVADELKKEKVIREASFIRDAWCYGGPG--ISLLYL 289 (409)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTC--CCSEECHHHHHHTSCCSCCSCCCCCSSSSHHH--HHHHHH
T ss_pred HHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCc--CCCccccHhhhcccccccCCCCCCcCCCCCHH--HHHHHH
Confidence 344444333 3899999999999999766542233321 111 00 0000 0011223111111 445556
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccc--chHHHHHHHHHHcCCHHHHHHHhhc
Q 006861 257 DQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAG--GMNDVLYKLFCITQDPKHLMLAHLF 328 (628)
Q Consensus 257 ~~Y~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~G--Gm~~~L~~LY~~TGd~ryL~lA~~f 328 (628)
.+|+.+++++.++.+.++++.+.++-. .. ... .-.+| |+..+|..+|+.|+|++|++.|..|
T Consensus 290 ~~~~~~~d~~~~~~a~~~~~~~~~~~~-~~-----~~~----~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 290 YGGLALDNDYFVDKAEKILESAMQRKL-GI-----DSY----MICHGYSGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHCT-TC-----CSC----CTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcc-CC-----CCC----CCCChHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 889999999999999999998876410 00 000 01233 6778999999999999999999875
No 42
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=87.91 E-value=2.3 Score=47.16 Aligned_cols=125 Identities=12% Similarity=-0.008 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCC-cccccC-Cchhh----hhhhhc-CCcc--ccc-chhhhhHHHHHHHHHHcCC----
Q 006861 199 ESLKEKMSAVVSALSACQKEIGS-GYLSAF-PTEQF----DRLEAL-IPVW--APY-YTIHKILAGLLDQYTYADN---- 264 (628)
Q Consensus 199 ~~L~~k~d~~Vd~l~~~Q~~~~d-GYl~~~-~~~~~----~r~~~~-~~~w--~py-y~~Hki~aGLl~~Y~~tG~---- 264 (628)
+.+++.+..-+|.|+++|. ++ |.+-.- ....| .+-++. ...+ ..- ...-..-++|-++++.-++
T Consensus 188 ~d~ldeikwg~D~llk~~~--~~~g~~y~~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~~ 265 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQD--PATGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPA 265 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBC--TTTCCBBSEEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHHHHhccc--CCCCeEEEEecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCHH
Confidence 5789999999999999997 32 332110 00001 000110 0111 000 0112244555567777777
Q ss_pred --HHHHHHHHHHHHHHHHHhhhhhhccccc---c-ccc-cccccccchHHHHHHHHHHcCCHHHHHHHhhcc
Q 006861 265 --AEALRMTTWMVEYFYNRVQNVIKKYSIE---R-HWQ-TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 329 (628)
Q Consensus 265 --~kaL~ia~~~ad~~~~~~~~~~~~~~~~---~-~~~-~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~ 329 (628)
+++|+.|+++.+|+.+.-..... .+.+ + +.. ....| +..+.+|||+.|||++||+.|+.+.
T Consensus 266 yA~~~L~~A~~~~~fa~~~~~~~~~-~~~~~~~~~Y~~~~~~De---l~wAA~~Ly~aTgd~~Yl~~a~~~~ 333 (537)
T 3gzk_A 266 LSSCCADAARRAYAWLGAHEMQPFH-NPDGILTGEYGDAELRDE---LLWASCALLRMTGDSAWARVCEPLL 333 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCCCC-CCTTCCSCCCCCSCCHHH---HHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccccc-CCcccccCCcCCCccchH---HHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 89999999999998653221100 0000 0 000 00112 3467799999999999999998753
No 43
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=86.35 E-value=13 Score=39.69 Aligned_cols=155 Identities=14% Similarity=0.123 Sum_probs=82.9
Q ss_pred CCCCCChhhhhhcCchhhhhhhhhhcchhHHHHHHHhhCCCCCCCCCCcccccccccCCCeEecCCCchH-HHHHHHHhh
Q 006861 63 HLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHW-RAQQTNLEY 141 (628)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~l~~~~~~~-~~~~~~~~~ 141 (628)
-|.++.-.+|++.+-|. ++ --.-|.+.|....+.+..-+...........+++.. ++.|+. ...+..++.
T Consensus 19 ~~~~~~~~~w~~y~~~s----~~-~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~y~s~~A~~iAd~ 89 (408)
T 1r76_A 19 SLPDTQRAAWQEYLARS----EA-QLSRDKASLAAELAPGQPLPPPPAEGKGADTMPLDK----PAAWYTSKAARHVADV 89 (408)
T ss_dssp SCSSSSCHHHHHHHHHH----HH-HHHHHHHHHHHHSCTTCCCCCCCCCSCCGGGSCSSS----CGGGGGSHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh----HH-HHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCC----chhhhchHHHHHHHHH
Confidence 46788889999977542 11 112456678777766331111111111234556655 245666 456777777
Q ss_pred hhcc--ccchhhHHHHHhcCCCCCCCCC------------CCC---CCC----CcCCCccchHHHHHHHHHHHHh-c--C
Q 006861 142 LLML--DVDKLVWNFRKTARLPAPGEPY------------GGW---EEP----SCELRGHFVGHYLSASALMWAS-T--H 197 (628)
Q Consensus 142 ll~l--d~drll~nFr~~agl~~~g~~~------------ggW---e~~----d~~l~Gh~~G~~LsalA~~ya~-t--~ 197 (628)
++.. +...+-.|.-...-+..++..+ |.| +.. .+-++=.-...-|.+|+.++.. + +
T Consensus 90 ll~~Q~~~GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~DnddTa~vl~aL~rv~~~~t~~~ 169 (408)
T 1r76_A 90 IVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQVVSQLAPEE 169 (408)
T ss_dssp HHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHHHHHHSCGGG
T ss_pred HHHccccCCCCCCccccccccchhhhhcccccccccccccccchhhcccccCCCCCCCCchHHHHHHHHHHHHhhccccc
Confidence 7643 2222222211111111111111 111 110 0111111145668888888887 7 8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 006861 198 NESLKEKMSAVVSALSACQKEIGSGYLSAFP 228 (628)
Q Consensus 198 D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~ 228 (628)
++.+++.+.+-|+.|+..|- ++|=.+.|.
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~--~nGGWpqFd 198 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQF--PNGGWPQVW 198 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSC--TTSCCBSBS
T ss_pred cHHHHHHHHHHHHHHHHccC--CCCCCcCcC
Confidence 99999999999999999999 887445553
No 44
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=85.67 E-value=1.8 Score=46.67 Aligned_cols=73 Identities=12% Similarity=0.044 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccccccccccc--cccc--chHHHHHHHHHHcCCHHHHHHHh
Q 006861 251 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLN--EEAG--GMNDVLYKLFCITQDPKHLMLAH 326 (628)
Q Consensus 251 i~aGLl~~Y~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~--~e~G--Gm~~~L~~LY~~TGd~ryL~lA~ 326 (628)
.+..++-+|+.++++.+.++++.|+..+. ++. ++.. .+-...++ ...- -+..+|.+||+.|++++|+++|.
T Consensus 378 yll~~vra~~~s~D~~Lw~~~~~ma~~~~--lgd-i~~~--~~~~~~~~~~~~~~sp~lL~allEL~~atq~~~~l~lA~ 452 (543)
T 2v8i_A 378 FLISYARAYAIDNDPLLWKVARGIANDQG--LGD-IGTA--PGKEVKVNMDTTNSDPYALFALLDLYHASQVADYRKLAE 452 (543)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHTT--CEE-CTTB--TTBSCEECTTCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhCC--ccc-cCCC--cCcccccccCCCCcCHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 34566789999999999999999887652 111 1110 00000000 0000 02258899999999999999998
Q ss_pred hc
Q 006861 327 LF 328 (628)
Q Consensus 327 ~f 328 (628)
..
T Consensus 453 ~~ 454 (543)
T 2v8i_A 453 KI 454 (543)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 45
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=84.15 E-value=6.2 Score=44.42 Aligned_cols=125 Identities=7% Similarity=-0.099 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCcccccCCc----h-hhhhhh-------hc---CCcccccchh-hhhHHHHHHHHHHc
Q 006861 199 ESLKEKMSAVVSALSACQKEIGSGYLSAFPT----E-QFDRLE-------AL---IPVWAPYYTI-HKILAGLLDQYTYA 262 (628)
Q Consensus 199 ~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~----~-~~~r~~-------~~---~~~w~pyy~~-Hki~aGLl~~Y~~t 262 (628)
+.+++.+..-.|.|++||. ++|+-..+.. . ...+|. +. |....|-... -.+-++|-++++.-
T Consensus 227 ~d~ldeikwg~D~llk~q~--~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~~p~t~~~~~~AAalAaas~vf 304 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQV--TEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARLW 304 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBC--CTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEEECCEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCCcceEEEEecCCCCCcccCCCCCChhhCCCceeecCCCcHHHHHHHHHHHHHHHhc
Confidence 6899999999999999998 7875111100 0 000110 00 0011111101 01233344555554
Q ss_pred CC------HHHHHHHHHHHHHHHHHhhhhhhccc-c----ccc-cc-cccccccchHHHHHHHHHHcCCHHHHHHHhhc
Q 006861 263 DN------AEALRMTTWMVEYFYNRVQNVIKKYS-I----ERH-WQ-TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLF 328 (628)
Q Consensus 263 G~------~kaL~ia~~~ad~~~~~~~~~~~~~~-~----~~~-~~-~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f 328 (628)
.+ +++|+.|+++-+|..+.-+......+ . .+. .. ....| +..+-+|||+.|||+.||+.|+..
T Consensus 305 k~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~ 380 (609)
T 1ut9_A 305 KDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYNDDYVGDE---FYWAACELYVTTGKDEYKNYLMNS 380 (609)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHH---HHHHHHHHHHHHCCHHHHHHHHTS
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHh
Confidence 43 58899999999998654221100000 0 000 00 00112 234668999999999999999875
No 46
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=83.94 E-value=2.4 Score=48.10 Aligned_cols=123 Identities=9% Similarity=0.006 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCC--ccccc-CCchhhhhhhhcCCcccccchh---h----hhHHHHHHHHHHcCC----
Q 006861 199 ESLKEKMSAVVSALSACQKEIGS--GYLSA-FPTEQFDRLEALIPVWAPYYTI---H----KILAGLLDQYTYADN---- 264 (628)
Q Consensus 199 ~~L~~k~d~~Vd~l~~~Q~~~~d--GYl~~-~~~~~~~r~~~~~~~w~pyy~~---H----ki~aGLl~~Y~~tG~---- 264 (628)
+.+++.+..-.|.|++||. ++ |.+-. .....++-+....+.-.|.|.. . ..-|+|-++++.-.+
T Consensus 232 ~d~ldeikwg~Dyllk~q~--~~~~g~~y~~vgd~~~~~~~~Pe~~~~~R~~~~~~s~~a~e~AAAlAaAS~vfk~~D~~ 309 (639)
T 1clc_A 232 PDFLDELKYEIDWILTMQY--PDGSGRVAHKVSTRNFGGFIMPENEHDERFFVPWSSAATADFVAMTAMAARIFRPYDPQ 309 (639)
T ss_dssp CHHHHHHHHHHHHHHTTBC--TTSSCCBEEEEECSSCCCSCCGGGCCSCCEEEEECHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHHHHHhcc--ccCCCeEEEEecCCCCCCCCCchhcCCCceEecCCcHHHHHHHHHHHHHHHhccccCHH
Confidence 6799999999999999997 43 43311 1000011000000000122111 1 123444455555442
Q ss_pred --HHHHHHHHHHHHHHHHHhhhhhhccccc-----c-cc-ccccccccchHHHHHHHHHHcCCHHHHHHHhhcc
Q 006861 265 --AEALRMTTWMVEYFYNRVQNVIKKYSIE-----R-HW-QTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 329 (628)
Q Consensus 265 --~kaL~ia~~~ad~~~~~~~~~~~~~~~~-----~-~~-~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~ 329 (628)
+++|+.|+++-+|..+.-+.. +... + +. .....| +..+-+|||+.|||++||+.|+...
T Consensus 310 yA~~~L~~Ak~l~~fA~~~~~~~---y~~~~~~~~g~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 377 (639)
T 1clc_A 310 YAEKCINAAKVSYEFLKNNPANV---FANQSGFSTGEYATVSDADD---RLWAAAEMWETLGDEEYLRDFENRA 377 (639)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSCC---CCCCTTCCSCCCCCSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCc---cCCCccccccccCCCCcchH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 578889999988886532110 1100 0 00 000112 2346689999999999999998653
No 47
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=82.96 E-value=25 Score=37.85 Aligned_cols=188 Identities=11% Similarity=-0.021 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHH
Q 006861 182 VGHYLSASALMWAST--HNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQY 259 (628)
Q Consensus 182 ~G~~LsalA~~ya~t--~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y 259 (628)
.|..--|+|.+..+- -|+++.++.-+-...+-+.-++++.-+.+. .++ .+ . -|.-.++.+++ ..|
T Consensus 155 a~~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~~~---~~Y---~s--s----~~~DE~~WAAa-~Ly 221 (441)
T 1ia6_A 155 LSETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGNGQ---SFY---QA--T----SFGDDLAWAAT-WLY 221 (441)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCCCT---TTS---CC--C----CSHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCC---CC--C----CchhHHHHHHH-HHH
Confidence 344555555555443 377776666666655555554433212110 000 00 0 11122244554 889
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHHhhcccccccchhhc
Q 006861 260 TYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLAL 339 (628)
Q Consensus 260 ~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~~~~~~~~ 339 (628)
++||++++|+.+....+..... ..........-.|.. .. .| +.+-|.+++++++|.+.++.+..... .....
T Consensus 222 ~aTgd~~Yl~~a~~~~~~~~~~-~~~~~~~~~~~~Wd~--~~-~g---~~~lla~~~~~~~~~~~~~~~~~~~~-~~~~~ 293 (441)
T 1ia6_A 222 TATNDSTYITDAEQFITLGNTM-NENKMQDKWTMCWDD--MY-VP---AALRLAQITGKQIYKDAIEFNFNYWK-TQVTT 293 (441)
T ss_dssp HHHCCTHHHHHHHHHTTC-------CGGGCSSCSSSSC--CH-HH---HHHHHHHHHCCHHHHHHHHHHHHHHH-HTSCB
T ss_pred HHhCCHHHHHHHHHHHhhhhhc-ccccccCCCcCCccc--hH-HH---HHHHHHhccCcHHHHHHHHHHHHHHH-hhccc
Confidence 9999999999887653321100 000000000011221 11 12 23335567899999888776532110 00000
Q ss_pred cCCCCC--CCc-ccCCcchhhH--HHHHHHHhCChHHHHHHHHHHHHhhhc----Cceeec
Q 006861 340 QADDIS--GFH-SNTHIPIVIG--SQMRYEVTGDQLHKTISMFFMDIVNSS----HTYATG 391 (628)
Q Consensus 340 ~~d~l~--g~h-anthip~~~G--~a~~Y~~TGD~~y~~a~~~~~~~v~~~----~~y~TG 391 (628)
....+. ..+ .+.++ ...+ +...+.++++++|++.++.-.|.|..+ .+|++|
T Consensus 294 tp~Gl~~~~~WGs~~~~-~~~a~l~~~~~~~~~~~~y~~~A~~qldYiLG~NP~~~SyvvG 353 (441)
T 1ia6_A 294 TPGGLKWLSNWGVLRYA-AAESMVMLVYCKQNPDQSLLDLAKKQVDYILGDNPANMSYIIG 353 (441)
T ss_dssp CTTSCBCCCSTTHHHHH-HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTCSTTCCCSBTT
T ss_pred CCCCceecCCcchHHHH-HHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCCCceeEEe
Confidence 000110 001 11111 1122 334468999999999999999998776 588887
No 48
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=82.35 E-value=6.5 Score=44.32 Aligned_cols=75 Identities=15% Similarity=0.066 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHhhhhhhccccccccccccccccc---hHHHHHHHHHHcCCHHHH
Q 006861 252 LAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGG---MNDVLYKLFCITQDPKHL 322 (628)
Q Consensus 252 ~aGLl~~Y~~tG~------~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~GG---m~~~L~~LY~~TGd~ryL 322 (628)
-|+|-++++.-.+ +++|+.|+++-+|..+.-+.... +...-.. .-++.+- +..+-+|||+.|||++||
T Consensus 223 AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~--~~~~~~~-~Y~ss~~~DEl~WAAawLy~ATgd~~Yl 299 (611)
T 2yik_A 223 AASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQ--GEDGPKG-YYGSSKWQDDYCWAAAWLYLATQNEHYL 299 (611)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCC--GGGTTTT-TSCCCCSHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccC--CCcccCc-CCCCCCcccHHHHHHHHHHHHhCCHHHH
Confidence 3444455555443 58899999999988653221100 0000000 0011111 234668999999999999
Q ss_pred HHHhhcc
Q 006861 323 MLAHLFD 329 (628)
Q Consensus 323 ~lA~~f~ 329 (628)
+.++.+.
T Consensus 300 ~~a~~~~ 306 (611)
T 2yik_A 300 DEAFKYY 306 (611)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9998753
No 49
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=81.24 E-value=4.9 Score=43.35 Aligned_cols=87 Identities=17% Similarity=0.220 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
..+||-+++..|+.++|++|.+-+..|...+ +-|=|++..... ..++-....-.|| ++.++++.|++
T Consensus 375 ~~~yll~~vra~~~s~D~~Lw~~~~~ma~~~-------~lgdi~~~~~~~-~~~~~~~~~~sp~-----lL~allEL~~a 441 (543)
T 2v8i_A 375 GNEFLISYARAYAIDNDPLLWKVARGIANDQ-------GLGDIGTAPGKE-VKVNMDTTNSDPY-----ALFALLDLYHA 441 (543)
T ss_dssp CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHT-------TCEECTTBTTBS-CEECTTCCCCCHH-----HHHHHHHHHHH
T ss_pred CchhhHHHHHHHHcCCCHHHHHHHHHHHhhC-------CccccCCCcCcc-cccccCCCCcCHH-----HHHHHHHHHHH
Confidence 4689999999999999999988777765543 456666532210 0111111222343 45577899999
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q 006861 262 ADNAEALRMTTWMVEYFYNR 281 (628)
Q Consensus 262 tG~~kaL~ia~~~ad~~~~~ 281 (628)
|+++++++.|.++++-+.++
T Consensus 442 tq~~~~l~lA~~~g~nl~~~ 461 (543)
T 2v8i_A 442 SQVADYRKLAEKIGDNIIKI 461 (543)
T ss_dssp HCCHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999988753
No 50
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=72.10 E-value=12 Score=40.59 Aligned_cols=190 Identities=11% Similarity=-0.000 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHH
Q 006861 182 VGHYLSASALMWAST--HNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQY 259 (628)
Q Consensus 182 ~G~~LsalA~~ya~t--~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y 259 (628)
.|..--|+|.+..+- -|+++.+++-+-...+-+.-++++.-|-.+....++ ..|.. |.--++-+++ ..|
T Consensus 174 a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y-------~s~s~-~~DEl~WAAa-wLy 244 (466)
T 2xfg_A 174 VAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYTAANGFY-------NSWSG-FYDELSWAAV-WLY 244 (466)
T ss_dssp HHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTS-------CCSSC-SHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCCcccccc-------CCCCC-CchHHHHHHH-HHH
Confidence 344555555555444 377666666555555554444434333111111111 11111 1122344554 899
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhhhhhhcccc----ccccccccccccchHHHHHHHHHHcCCH-HHHHHHhhccccccc
Q 006861 260 TYADNAEALRMTTWMVEYFYNRVQNVIKKYSI----ERHWQTLNEEAGGMNDVLYKLFCITQDP-KHLMLAHLFDKPCFL 334 (628)
Q Consensus 260 ~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~----~~~~~~l~~e~GGm~~~L~~LY~~TGd~-ryL~lA~~f~~~~~~ 334 (628)
++||++++|+.+....+.+ ....+.... .-.|. .-.. -+.+-|.++++++ .|++.++.+.+...-
T Consensus 245 ~ATgd~~Yl~~a~~~~~~~----~~~~~~~~~~~~~~~~Wd---~~~~---g~~~lla~~~~~~~~~~~~~~~~~~~~~~ 314 (466)
T 2xfg_A 245 LATNDSSYLDKAESYSDKW----GYEPQTNIPKYKWAQCWD---DVTY---GTYLLLARIKNDNGKYKEAIERHLDWWTT 314 (466)
T ss_dssp HHHCCHHHHHHHHHTTTTS----CBSTTSSSBCCSSCCBTT---BCHH---HHHHHHHHHHCSSCHHHHHHHHHHHHHTT
T ss_pred HHhCCHHHHHHHHHHHHHh----ccccccccccccCcCCcc---hhHH---HHHHHHHHhcCCcHHHHHHHHHHHHHHHh
Confidence 9999999998776643221 100000000 00122 1111 1233355668877 888877765321110
Q ss_pred chhhccCC-CCCCC-----c-ccCCcchhhH--HHHHHHHhC-----ChHHHHHHHHHHHHhhhc--Cceeec
Q 006861 335 GLLALQAD-DISGF-----H-SNTHIPIVIG--SQMRYEVTG-----DQLHKTISMFFMDIVNSS--HTYATG 391 (628)
Q Consensus 335 ~~~~~~~d-~l~g~-----h-anthip~~~G--~a~~Y~~TG-----D~~y~~a~~~~~~~v~~~--~~y~TG 391 (628)
+....+.. ...|+ + ++.++ ...+ +.+.+.++| +++|++.++.-.|.|..+ ++|++|
T Consensus 315 ~~~~~~~~~tp~Gl~~~~~Wgs~~~~-~n~afl~~~y~~~~~~~~~~~~~y~~~A~~qidYiLG~N~~SyvvG 386 (466)
T 2xfg_A 315 GYNGERITYTPKGLAWLDQWGSLRYA-TTTAFLACVYSDWENGDKEKAKTYLEFARSQADYALGSTGRSFVVG 386 (466)
T ss_dssp CBTTBCCCBCTTSCBCCCSSSHHHHH-HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTTTSSCCBTT
T ss_pred ccCCCccccCCccccccCCCCchHHH-HHHHHHHHHHHHhcCCCcccHHHHHHHHHHhHHhhcCCCCcceEec
Confidence 00000000 00011 0 11111 1122 233356677 789999999999988664 678887
No 51
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=69.42 E-value=16 Score=32.67 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=26.4
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CCCCCCcEEEECCeec
Q 006861 551 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 589 (628)
Q Consensus 551 ~v~i~v~~~~~~~~ftL~lRIP~-Wa~~~~~~v~VNG~~~ 589 (628)
.|+++|+.. ++...+|.+|.-. ........|.|||..+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (139)
T 2w87_A 40 AVVWAIDAT-SSGRRTLTIRYANGGTANRNGSLVINGGSN 78 (139)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTTTT
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCceEEEEECCEEc
Confidence 577777764 5678888888864 3221247899999765
No 52
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=65.47 E-value=19 Score=38.59 Aligned_cols=120 Identities=12% Similarity=0.124 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHHc
Q 006861 183 GHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYA 262 (628)
Q Consensus 183 G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~t 262 (628)
-..+-|++.+|..|+|+.+++.+....+.+.. . .... .-.|.....+-.+ ...+.+
T Consensus 213 DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~--~----~~~~-------------~~~Wd~~~~g~~~-----lla~~~ 268 (433)
T 1ks8_A 213 DELVWAAAWLYRATNDNTYLNTAESLYDEFGL--Q----NWGG-------------GLNWDSKVSGVQV-----LLAKLT 268 (433)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHTTG--G----GSCC-------------CCCSSCCHHHHHH-----HHHHHH
T ss_pred cHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc--C----cCcC-------------CcCccchhhHHHH-----HHhhcc
Confidence 45677899999999999999998876543210 0 0000 1123332222111 122456
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHH-cCCHHHHHHHhh
Q 006861 263 DNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCI-TQDPKHLMLAHL 327 (628)
Q Consensus 263 G~~kaL~ia~~~ad~~~~~~~~~~~~~~~~~~~~~l~~e~GGm~~~L~~LY~~-TGd~ryL~lA~~ 327 (628)
+++++.+.+..+++++.......+.+......|.... ....+...+...++. +++++|+++|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~-~~~n~a~l~~~~~~~~~~~~~y~~~A~~ 333 (433)
T 1ks8_A 269 NKQAYKDTVQSYVNYLINNQQKTPKGLLYIDMWGTLR-HAANAAFIMLEAAELGLSASSYRQFAQT 333 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHH-HHHHHHHHHHHHHHTTSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhcCCcCCCCceeecCCchhH-HHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 8899999999999988754332222211111121100 000111244445566 899999999975
No 53
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=63.02 E-value=28 Score=31.33 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=25.7
Q ss_pred EEEEEEEeCCCCeeeEEEEecc-CCCCCCCcEEEECCeec
Q 006861 551 RVTLTFSSKGSGLTTSLNLRIP-TWTSSNGAKATLNGQDL 589 (628)
Q Consensus 551 ~v~i~v~~~~~~~~ftL~lRIP-~Wa~~~~~~v~VNG~~~ 589 (628)
.|+++|+.. ++...+|.+|.- +........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (145)
T 2w3j_A 40 SIVWSLSAA-SAKTYTAQIRFGNGGTSARRATVVVNDSQI 78 (145)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC-CCeEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 577777764 567788888886 33222256899999764
No 54
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=62.10 E-value=30 Score=38.94 Aligned_cols=188 Identities=12% Similarity=0.022 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHH
Q 006861 182 VGHYLSASALMWAST--HNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQY 259 (628)
Q Consensus 182 ~G~~LsalA~~ya~t--~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y 259 (628)
.|..--|+|.+..+- -|+++.+++-+-...+-+.-++++..|-.+....++. + . -|.--++-+++ ..|
T Consensus 153 a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~---s--s----~~~DEl~WAAa-wLy 222 (614)
T 1g87_A 153 CASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYS---S--S----SFYDDLSWAAV-WLY 222 (614)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSC---C--S----CSHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcCCcC---C--C----CchhHHHHHHH-HHH
Confidence 344445555554443 3776666555555555444443333231111111100 0 0 11122244554 899
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhhhhhhcccc----ccccccccccccchHHHHHHHHHHcCCHHHHHHHhhcccccccc
Q 006861 260 TYADNAEALRMTTWMVEYFYNRVQNVIKKYSI----ERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLG 335 (628)
Q Consensus 260 ~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~~~----~~~~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~~~~ 335 (628)
++||++++|+.+....+.+ ....+.... .-.|. .-.. -+.+-|.++++++.|.+.++.+.....-+
T Consensus 223 ~ATgd~~Yl~~a~~~~~~~----~~~~~~~~~~~~~~~~Wd---~~~~---g~~~lla~~~~~~~~~~~~~~~~~~~~~~ 292 (614)
T 1g87_A 223 LATNDSTYLDKAESYVPNW----GKEQQTDIIAYKWGQCWD---DVHY---GAELLLAKLTNKQLYKDSIEMNLDFWTTG 292 (614)
T ss_dssp HHHCCHHHHHHHHHTGGGS----CBCTTSSSBCCSSCCBTT---BCHH---HHHHHHHHHHCCHHHHHHHHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHHHHhh----ccccccccccccCCcCcc---chHH---HHHHHHHhccCcHHHHHHHHHHHHHhhhc
Confidence 9999999998877643221 100000000 00122 1111 12334566789999998887764211100
Q ss_pred hhhc--cCCCCCCC-----c-ccCCcchhhH--HHHHHHHhC-----ChHHHHHHHHHHHHhhhc--Cceeec
Q 006861 336 LLAL--QADDISGF-----H-SNTHIPIVIG--SQMRYEVTG-----DQLHKTISMFFMDIVNSS--HTYATG 391 (628)
Q Consensus 336 ~~~~--~~d~l~g~-----h-anthip~~~G--~a~~Y~~TG-----D~~y~~a~~~~~~~v~~~--~~y~TG 391 (628)
.... ...+ .|+ + ++.++ ...+ +...+.++| +++|++.++.-.|.|..+ ++|++|
T Consensus 293 ~~~~~~~~tp-~Gl~~~~~Wgs~~~~-~n~afl~~~y~~~~~~~~~~~~~y~~~A~~qidYiLG~n~~SyvvG 363 (614)
T 1g87_A 293 VNGTRVSYTP-KGLAWLFQWGSLRHA-TTQAFLAGVYAEWEGCTPSKVSVYKDFLKSQIDYALGSTGRSFVVG 363 (614)
T ss_dssp BTTBCCEECT-TSCEECCSSSHHHHH-HHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHTTTSSCCBTT
T ss_pred cCCCccccCC-CCceeccCCCcHHHH-HHHHHHHHHHHHhhCCCccCHHHHHHHHHHHHHHhcCCCCcceEec
Confidence 0000 0000 011 1 11111 1122 233357777 789999999888887653 688887
No 55
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=59.58 E-value=1.7e+02 Score=32.72 Aligned_cols=191 Identities=13% Similarity=0.124 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHH
Q 006861 182 VGHYLSASALMWASTH--NESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQY 259 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~--D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y 259 (628)
.|...-|+|.+..+-. |+++.+++-+-...+-+.-++++.-|....+...+ + ..|.. |.--++-+++ ..|
T Consensus 153 a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~--Y----~s~s~-~~DEl~WAAa-wLy 224 (605)
T 1tf4_A 153 AAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAF--Y----NSWSG-YQDELVWGAY-WLY 224 (605)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHH--H----CCSSC-SHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCcccc--c----cCCCC-CchHHHHHHH-HHH
Confidence 3455555555554433 77776666666655555554444334333220000 0 11111 1122345554 899
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhhhhhhcc--cc--ccccccccccccchHHHHHHHHHHcCCHHHHHHHhhcccccccc
Q 006861 260 TYADNAEALRMTTWMVEYFYNRVQNVIKKY--SI--ERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLG 335 (628)
Q Consensus 260 ~~tG~~kaL~ia~~~ad~~~~~~~~~~~~~--~~--~~~~~~l~~e~GGm~~~L~~LY~~TGd~ryL~lA~~f~~~~~~~ 335 (628)
++||++++|+.+....+- +....... .. .-.|.- ... |. .+-|.++|++++|.+.|+.+.....-+
T Consensus 225 ~ATgd~~Yl~~a~~~~~~----~~~~~~~~~~~~~~~~~Wd~--~~~-g~---~~lla~~~~~~~y~~~a~~~~~~~~~~ 294 (605)
T 1tf4_A 225 KATGDDSYLAKAEYEYDF----LSTEQQTDLRSYRWTIAWDD--KSY-GT---YVLLAKETGKQKYIDDANRWLDYWTVG 294 (605)
T ss_dssp HHHCCHHHHHHHHHHGGG----SCBCTTSSCBCCSSCCSSSC--CHH-HH---HHHHHHHHCCHHHHHHHHHHHHHTTTC
T ss_pred HHhCCHHHHHHHHHHHHh----cccccccccccccccccccc--hHH-HH---HHHHHhccChHHHHHHHHHHHHHHhcc
Confidence 999999999887763321 11100000 00 011221 111 12 233456789999999998774321100
Q ss_pred hhhcc--CCCCCCC-cccCCcchh----hHH-HH-HHHHhC----ChHHHHHHHHHHHHhhhcC----ceeec
Q 006861 336 LLALQ--ADDISGF-HSNTHIPIV----IGS-QM-RYEVTG----DQLHKTISMFFMDIVNSSH----TYATG 391 (628)
Q Consensus 336 ~~~~~--~d~l~g~-hanthip~~----~G~-a~-~Y~~TG----D~~y~~a~~~~~~~v~~~~----~y~TG 391 (628)
....+ ..+ .|+ +.+.-.+.. .++ +. .+.+.+ +++|++.++.-.|.|.... +|++|
T Consensus 295 ~~~~~~~~tp-~Gl~~~~~WGs~~~~~n~a~l~~~~a~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyvvG 366 (605)
T 1tf4_A 295 VNGQRVPYSP-GGMAVLDTWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYVVG 366 (605)
T ss_dssp BTTBCCCBCT-TSCBCCCSSSHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTCSTTCCCSBTT
T ss_pred cCCCccccCC-CcceecCCccHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHhcCCCCCCcceEec
Confidence 00000 000 010 001111211 222 12 234444 4689999999999987654 88887
No 56
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=52.25 E-value=43 Score=34.65 Aligned_cols=92 Identities=16% Similarity=0.121 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhhhhcCCcccccchhhhhHHHHHHHHHH
Q 006861 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (628)
Q Consensus 182 ~G~~LsalA~~ya~t~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~~~~~~~w~pyy~~Hki~aGLl~~Y~~ 261 (628)
...-|.+|+.++..++++++++.+++-++.|+..|- ++|=.+.|.... ..+ ..+-|+.. -+++.++.....
T Consensus 76 Ta~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~--~nGGWpqFdpd~-~~Y----l~~IpFnD--DvtarvLelL~~ 146 (332)
T 1gxm_A 76 TITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQY--STGALPQFYPLK-GGY----SDHATFND--NGMAYALTVLDF 146 (332)
T ss_dssp THHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--TTSCCBSEESCC-SGG----GGSEECGG--GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccC--CCCCccccCCCc-ccc----cccCCcch--HHHHHHHHHHHH
Confidence 456788899999888999999999999999999999 777555553311 000 01112222 133444333333
Q ss_pred cCC---------------HHHHHHHHHHHHHHHHHh
Q 006861 262 ADN---------------AEALRMTTWMVEYFYNRV 282 (628)
Q Consensus 262 tG~---------------~kaL~ia~~~ad~~~~~~ 282 (628)
.+. .++...+.|..+|+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 147 AANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp HHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHhccCCccccccccchhhhhHHHHHHHHHHHHHhh
Confidence 321 577888999999997653
No 57
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=43.99 E-value=67 Score=28.47 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=22.4
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CCCCCCcEEEECCee
Q 006861 551 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQD 588 (628)
Q Consensus 551 ~v~i~v~~~~~~~~ftL~lRIP~-Wa~~~~~~v~VNG~~ 588 (628)
.|+++|+.. ++...+|.+|.=. -.......|.|||+.
T Consensus 41 ~v~~~V~v~-~aG~Y~l~~ryan~~~~~~~~~l~VNG~~ 78 (144)
T 2w47_A 41 YIEWNVNAP-SSGSYALIFRYANGTTANRPMRITVNGNI 78 (144)
T ss_dssp EEEEEEEES-SSEEEEEEEEEECCSSSCCCEEEEETTEE
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCeEEEEEECCeE
Confidence 566777653 4566777777622 111114688899976
No 58
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=38.91 E-value=1.4e+02 Score=25.57 Aligned_cols=38 Identities=24% Similarity=0.150 Sum_probs=22.9
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CCCCCCcEEEECCeec
Q 006861 551 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 589 (628)
Q Consensus 551 ~v~i~v~~~~~~~~ftL~lRIP~-Wa~~~~~~v~VNG~~~ 589 (628)
.|+++|+.. ++...+|.+|.=. -.......|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~ 78 (127)
T 2vzp_A 40 SVEWTVTVP-SAGTYDVVVRYANGTTTSRPLDFSVNGSIS 78 (127)
T ss_dssp EEEEEEEES-SSEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEEcC-CCCEEEEEEEEEcCCCCCeEEEEEECCEEe
Confidence 566666653 4566677777622 1111257899999863
No 59
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=32.58 E-value=1.5e+02 Score=32.59 Aligned_cols=75 Identities=15% Similarity=0.084 Sum_probs=49.3
Q ss_pred HHHHHHHhCC------hHHHHHHHHHHHHhhhcCceeecCCCCCCCCCCCcccccCCCCCccccchHHHHHHHHHHhhhc
Q 006861 359 SQMRYEVTGD------QLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRW 432 (628)
Q Consensus 359 ~a~~Y~~TGD------~~y~~a~~~~~~~v~~~~~y~TGG~g~~E~f~~~~~L~~~~~~~~~EtCas~~~l~~~~~L~~~ 432 (628)
.|..+++-++ ++++++|+..|+...++..-. +..+.+. ....|..+.-.=+++.-+-.|++.
T Consensus 252 lA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~---------~~~~~~~---~~~~Y~~~~~~Del~wAA~~Ly~a 319 (537)
T 3gzk_A 252 MAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP---------FHNPDGI---LTGEYGDAELRDELLWASCALLRM 319 (537)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC---------CCCCTTC---CSCCCCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc---------ccCCccc---ccCCcCCCccchHHHHHHHHHHHH
Confidence 5566777776 678999999999887654311 1110000 012234444555577778889999
Q ss_pred cCCchhHHHHHHH
Q 006861 433 TKEIAYADYYERS 445 (628)
Q Consensus 433 tgd~~YaD~~Er~ 445 (628)
|||.+|.+.++..
T Consensus 320 Tgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 320 TGDSAWARVCEPL 332 (537)
T ss_dssp HCCGGGHHHHHHH
T ss_pred hCCHHHHHHHHHh
Confidence 9999999999874
No 60
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=26.52 E-value=41 Score=27.47 Aligned_cols=32 Identities=13% Similarity=0.066 Sum_probs=20.5
Q ss_pred EEEECCeecCCCCCCCEEEEEeecCCCCEEEEEecCceeEE
Q 006861 581 KATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTE 621 (628)
Q Consensus 581 ~v~VNG~~~~~~~~~gy~~I~R~W~~GD~I~L~lpm~~r~~ 621 (628)
.|+|||+.+.. ++. -+.||+|+|.+|-+....
T Consensus 27 ~V~VNg~~~~~----~~~-----v~~gd~I~v~~~~~~~~~ 58 (92)
T 2k6p_A 27 AVWLNGSCAKA----SKE-----VKAGDTISLHYLKGIEEY 58 (92)
T ss_dssp CCEETTEECCT----TCB-----CCTTCEEEECCSSCCEEE
T ss_pred cEEECCEEcCC----CCC-----cCCCCEEEEEeCCceEEE
Confidence 58899997532 121 257888888887654443
No 61
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=24.05 E-value=1.4e+02 Score=28.79 Aligned_cols=55 Identities=18% Similarity=0.252 Sum_probs=35.2
Q ss_pred eeEEEEecc-CCCC--CCCcEEEECCeecCCC-CCCCEEEEE-----------eecCCCCEEEEEecCce
Q 006861 564 TTSLNLRIP-TWTS--SNGAKATLNGQDLPLP-SPGNFLSVT-----------KTWSSDDKLTIQLPLTL 618 (628)
Q Consensus 564 ~ftL~lRIP-~Wa~--~~~~~v~VNG~~~~~~-~~~gy~~I~-----------R~W~~GD~I~L~lpm~~ 618 (628)
...+.+++| .+.+ .-+-.|.|||.-.+.. ..++..+++ ..|+.||+|-|+-.|++
T Consensus 21 ~~~l~i~~~~~~~~~l~~g~SIAvnGvcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEral~~ 90 (213)
T 1i8d_A 21 FRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKF 90 (213)
T ss_dssp EEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEEECCBT
T ss_pred cEEEEEEEChHHhccCCCCcEEEECCEEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeCcCCCC
Confidence 455667777 3321 1267999999865542 234445544 34899999999887754
No 62
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=23.91 E-value=61 Score=28.79 Aligned_cols=32 Identities=25% Similarity=0.126 Sum_probs=21.4
Q ss_pred EEEECCeecCCCCCCCEEEEEeecCCCCEEEEEecCceeEE
Q 006861 581 KATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTE 621 (628)
Q Consensus 581 ~v~VNG~~~~~~~~~gy~~I~R~W~~GD~I~L~lpm~~r~~ 621 (628)
.|+|||+.+.. + + .-+.||+|+|.+|-..+.+
T Consensus 35 ~V~VNG~~vk~---s-~-----~V~~GD~I~I~~~~~~~~~ 66 (133)
T 1dm9_A 35 KVHYNGQRSKP---S-K-----IVELNATLTLRQGNDERTV 66 (133)
T ss_dssp CEEETTEECCT---T-C-----BCCTTCEEEEEETTEEEEE
T ss_pred cEEECCEEcCC---C-C-----EeCCCCEEEEEeCCceeeE
Confidence 68999997532 1 2 1257999999987654443
No 63
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=22.88 E-value=21 Score=26.35 Aligned_cols=19 Identities=21% Similarity=0.480 Sum_probs=14.5
Q ss_pred CCEEEEEeecCCCCEEEEEe
Q 006861 595 GNFLSVTKTWSSDDKLTIQL 614 (628)
Q Consensus 595 ~gy~~I~R~W~~GD~I~L~l 614 (628)
=||-.|+.+| +||+|+++=
T Consensus 30 lgyndinvtw-dgdtvtveg 48 (62)
T 2gjh_A 30 LGYNDINVTW-DGDTVTVEG 48 (62)
T ss_dssp TTCCSCEEEE-CSSCEEEEE
T ss_pred hCcccceeEE-cCCEEEEEe
Confidence 4688888899 488888763
No 64
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=22.24 E-value=2.2e+02 Score=32.51 Aligned_cols=111 Identities=18% Similarity=0.169 Sum_probs=59.8
Q ss_pred CCCCCCCcCCCc--c--chHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHhhcCCcccccCCchhhhhh-hhcC
Q 006861 168 GGWEEPSCELRG--H--FVGHYLSASALMWAST---HNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRL-EALI 239 (628)
Q Consensus 168 ggWe~~d~~l~G--h--~~G~~LsalA~~ya~t---~D~~L~~k~d~~Vd~l~~~Q~~~~dGYl~~~~~~~~~r~-~~~~ 239 (628)
|||-+.+.+ .| + ..+.-|.|++.+.... +++...+.+++.|+.|..+|. +||-+++|....-..| +...
T Consensus 440 GGW~f~~~~-~~~pd~d~TA~vl~aL~~~~~~~~~~g~~~~~~~i~~av~wLls~Q~--~DGgw~a~~~~~~~~~l~~i~ 516 (732)
T 1w6k_A 440 GGFSFSTLD-CGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRN--PDGGFATYETKRGGHLLELLN 516 (732)
T ss_dssp TCCBSSCTT-TCCBCHHHHHHHHHHHHHHHHHCTTCCSCCCHHHHHHHHHHHHTTCC--TTSCBCSSSCCCSCGGGGGGC
T ss_pred CeecCCCCC-CCCCccccHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHhcC--CCCCEEeecCCCchHHHhhCc
Confidence 778664321 11 1 1456677777655443 345667788999999999999 8988776643210001 0000
Q ss_pred -----Cccc-----ccchhhhhHHHHHHHHHH-cCC--HHHHHHHHHHHHHHHHHh
Q 006861 240 -----PVWA-----PYYTIHKILAGLLDQYTY-ADN--AEALRMTTWMVEYFYNRV 282 (628)
Q Consensus 240 -----~~w~-----pyy~~Hki~aGLl~~Y~~-tG~--~kaL~ia~~~ad~~~~~~ 282 (628)
..|. +.+|.+ ++.+|...-.. .+. ++.-+.+.+.++|+.+..
T Consensus 517 ~~e~fg~~~~d~s~v~~Ta~-vL~aL~~~~~~~~~~~~~~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 517 PSEVFGDIMIDYTYVECTSA-VMQALKYFHKRFPEHRAAEIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp CCSSCSSCSSCCCBHHHHHH-HHHHHHHHHHHCTTSSHHHHHHHHHHHHHHHHHHS
T ss_pred chhcccccccCCCcchHHHH-HHHHHHHhccccccccchhhHHHHHHHHHHHHhhc
Confidence 1111 123333 34455322221 122 344567889999997654
No 65
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=22.07 E-value=1.2e+02 Score=27.37 Aligned_cols=9 Identities=22% Similarity=0.438 Sum_probs=4.5
Q ss_pred cEEEECCee
Q 006861 580 AKATLNGQD 588 (628)
Q Consensus 580 ~~v~VNG~~ 588 (628)
+.|+|||..
T Consensus 88 ~~v~VNG~~ 96 (156)
T 2wz8_A 88 CSISVNGGP 96 (156)
T ss_dssp EEEEETTCC
T ss_pred EEEEECCce
Confidence 445555543
No 66
>3a35_A Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A*
Probab=21.53 E-value=1.3e+02 Score=28.56 Aligned_cols=53 Identities=13% Similarity=0.290 Sum_probs=33.0
Q ss_pred eEEEEeccC----CCCCCCcEEEECCeecCCC-CCCCEEEEE----------eecCCCCEEEEEecCce
Q 006861 565 TSLNLRIPT----WTSSNGAKATLNGQDLPLP-SPGNFLSVT----------KTWSSDDKLTIQLPLTL 618 (628)
Q Consensus 565 ftL~lRIP~----Wa~~~~~~v~VNG~~~~~~-~~~gy~~I~----------R~W~~GD~I~L~lpm~~ 618 (628)
..+.|+||. -... +-.|.|||.-.+.. ..++..+++ ..|+.||+|-|+..|++
T Consensus 22 ~~~~i~i~~~~~~~l~~-g~SIAvnGvcLTV~~v~~~~F~v~ipeTl~~T~Lg~l~~Gd~VNLEral~~ 89 (190)
T 3a35_A 22 QRHGITFPKDILESVEK-GTVMLVNGCSLTVVRISGDVVYFDIDQAINTTTFRELEVGNKVNLEVRPEF 89 (190)
T ss_dssp EEEEEECCHHHHHTCCT-TCEEEETTEEEEEEEEETTEEEEEESTTTTTSSGGGCCTTCEEEEECCCSS
T ss_pred EEEEEEECchhhccCCC-CCEEEECCEEeeEEEEcCCEEEEecHHHHhhcccccCCCCCEEEeCcCCcC
Confidence 355666663 2222 67899999765532 223344443 34899999999988765
No 67
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=21.50 E-value=1.9e+02 Score=32.12 Aligned_cols=41 Identities=17% Similarity=0.344 Sum_probs=24.4
Q ss_pred EEEEEEE-eCCCCeeeEEEE---eccCCCCCCCcEEEECCeecCCCC
Q 006861 551 RVTLTFS-SKGSGLTTSLNL---RIPTWTSSNGAKATLNGQDLPLPS 593 (628)
Q Consensus 551 ~v~i~v~-~~~~~~~ftL~l---RIP~Wa~~~~~~v~VNG~~~~~~~ 593 (628)
.++|+|+ ......+.+|+| |.++=.+ .++|+|||+++..+.
T Consensus 490 ~~~F~i~~v~tg~g~A~LRvg~gR~~g~s~--~p~V~vNG~~v~vP~ 534 (591)
T 4aw7_A 490 SLSFPFTGIESGSGRASLRMSIGRPVSASK--KPVVKINGTAVSVPD 534 (591)
T ss_dssp CEEEEEEEECCCSEEEEEEEEEEEETTSCS--CCEEEETTEEECCCS
T ss_pred ceEEEEecccCCCceEEEEEEcCcCCCcCC--CCEEEECCEEeccCc
Confidence 3555555 211124444544 5565544 689999999987643
Done!