Query 006862
Match_columns 628
No_of_seqs 199 out of 877
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 15:33:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 4E-149 8E-154 1240.8 58.3 610 1-610 1-612 (612)
2 PLN02247 indole-3-acetic acid- 100.0 1E-142 3E-147 1190.9 57.2 588 16-604 7-603 (606)
3 PLN02249 indole-3-acetic acid- 100.0 7E-132 2E-136 1113.7 56.8 574 16-604 17-595 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 3E-115 7E-120 976.3 41.5 515 22-582 2-528 (528)
5 COG1541 PaaK Coenzyme F390 syn 99.9 1.2E-24 2.6E-29 234.8 30.5 394 31-578 21-435 (438)
6 TIGR03335 F390_ftsA coenzyme F 99.9 2E-23 4.3E-28 230.9 28.2 392 32-554 13-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 5.7E-21 1.2E-25 209.2 30.0 386 32-554 7-410 (422)
8 TIGR02304 aden_form_hyp probab 99.8 5.1E-18 1.1E-22 186.4 28.8 317 32-499 23-375 (430)
9 PRK00174 acetyl-CoA synthetase 99.3 2.3E-09 4.9E-14 123.8 30.2 163 401-589 444-634 (637)
10 PRK07529 AMP-binding domain pr 99.3 7E-10 1.5E-14 128.1 26.0 134 306-467 334-489 (632)
11 COG1021 EntE Peptide arylation 99.3 9.8E-12 2.1E-16 131.2 8.2 133 304-467 304-458 (542)
12 TIGR02188 Ac_CoA_lig_AcsA acet 99.2 5.4E-09 1.2E-13 120.3 30.8 160 402-586 436-624 (625)
13 PRK07514 malonyl-CoA synthase; 99.2 2.3E-09 4.9E-14 119.2 26.7 130 307-468 271-422 (504)
14 PRK09088 acyl-CoA synthetase; 99.2 2.6E-09 5.6E-14 118.5 25.4 130 306-467 253-405 (488)
15 PRK06334 long chain fatty acid 99.2 9.6E-10 2.1E-14 124.5 22.3 131 307-468 301-455 (539)
16 PRK05605 long-chain-fatty-acid 99.2 1.2E-09 2.7E-14 123.9 23.1 130 307-467 338-489 (573)
17 PTZ00237 acetyl-CoA synthetase 99.2 3.1E-09 6.6E-14 123.3 26.4 231 306-586 381-643 (647)
18 PRK13295 cyclohexanecarboxylat 99.2 2.6E-09 5.7E-14 120.7 23.5 128 307-467 314-463 (547)
19 TIGR03205 pimA dicarboxylate-- 99.2 7.7E-09 1.7E-13 116.7 26.8 131 307-468 314-466 (541)
20 PRK04319 acetyl-CoA synthetase 99.2 7.2E-09 1.6E-13 117.8 26.4 129 307-468 325-477 (570)
21 PLN02574 4-coumarate--CoA liga 99.2 4.3E-09 9.2E-14 119.5 24.3 132 307-467 321-474 (560)
22 PRK09274 peptide synthase; Pro 99.2 6.3E-09 1.4E-13 117.6 25.0 64 401-468 381-465 (552)
23 PRK07788 acyl-CoA synthetase; 99.2 4.9E-09 1.1E-13 118.4 24.0 129 307-468 325-472 (549)
24 PRK06060 acyl-CoA synthetase; 99.2 6.2E-09 1.3E-13 121.7 25.5 130 307-468 262-410 (705)
25 PRK06155 crotonobetaine/carnit 99.1 6.1E-09 1.3E-13 117.9 24.7 129 307-468 296-445 (542)
26 TIGR01734 D-ala-DACP-lig D-ala 99.1 2.3E-08 5E-13 111.1 28.5 63 401-468 336-418 (502)
27 PRK07786 long-chain-fatty-acid 99.1 1.3E-08 2.9E-13 114.8 26.4 129 307-467 292-443 (542)
28 PRK05677 long-chain-fatty-acid 99.1 2.8E-09 6.2E-14 120.9 21.1 128 307-467 328-477 (562)
29 PRK08314 long-chain-fatty-acid 99.1 1.1E-08 2.5E-13 115.1 25.2 130 307-468 307-461 (546)
30 PRK10524 prpE propionyl-CoA sy 99.1 3.9E-08 8.5E-13 113.3 29.9 130 306-467 356-517 (629)
31 PRK04813 D-alanine--poly(phosp 99.1 1.6E-08 3.5E-13 112.1 25.5 63 401-468 338-420 (503)
32 PRK03584 acetoacetyl-CoA synth 99.1 7.4E-08 1.6E-12 111.7 31.8 159 404-586 460-648 (655)
33 PRK06187 long-chain-fatty-acid 99.1 2.2E-08 4.8E-13 111.3 26.1 59 405-467 365-439 (521)
34 PLN02654 acetate-CoA ligase 99.1 5.8E-08 1.3E-12 113.1 30.5 161 401-586 474-662 (666)
35 PRK06164 acyl-CoA synthetase; 99.1 1.9E-08 4.1E-13 113.3 25.6 63 401-467 371-450 (540)
36 PRK07656 long-chain-fatty-acid 99.1 1.9E-08 4E-13 111.9 24.6 129 306-467 282-436 (513)
37 PRK07867 acyl-CoA synthetase; 99.1 3.1E-08 6.8E-13 111.8 26.4 127 307-467 269-425 (529)
38 PRK07470 acyl-CoA synthetase; 99.1 4E-08 8.7E-13 110.3 27.1 63 401-467 360-438 (528)
39 PRK08316 acyl-CoA synthetase; 99.1 1.9E-08 4E-13 112.2 23.9 130 307-468 288-440 (523)
40 PLN02246 4-coumarate--CoA liga 99.1 1.6E-08 3.5E-13 113.9 23.2 130 307-467 300-456 (537)
41 TIGR01217 ac_ac_CoA_syn acetoa 99.1 6E-08 1.3E-12 112.7 28.0 159 404-586 461-646 (652)
42 PRK06145 acyl-CoA synthetase; 99.1 1.1E-08 2.4E-13 113.7 21.0 130 307-468 266-418 (497)
43 PRK08974 long-chain-fatty-acid 99.1 4.1E-08 8.8E-13 111.3 25.9 128 307-467 327-476 (560)
44 TIGR03208 cyc_hxne_CoA_lg cycl 99.1 2.4E-08 5.2E-13 112.6 23.9 63 401-467 384-461 (538)
45 PRK12583 acyl-CoA synthetase; 99.1 5.6E-08 1.2E-12 109.6 26.9 129 307-467 319-472 (558)
46 PLN02330 4-coumarate--CoA liga 99.1 4E-08 8.6E-13 111.1 25.6 130 307-467 305-461 (546)
47 PRK07638 acyl-CoA synthetase; 99.0 1.5E-08 3.2E-13 112.6 21.6 129 307-467 256-405 (487)
48 TIGR01733 AA-adenyl-dom amino 99.0 7E-09 1.5E-13 111.7 18.3 129 307-467 236-399 (408)
49 PRK05852 acyl-CoA synthetase; 99.0 5.3E-08 1.2E-12 109.7 25.9 130 307-467 297-452 (534)
50 PRK07059 Long-chain-fatty-acid 99.0 1.5E-08 3.4E-13 114.6 21.7 129 306-467 328-479 (557)
51 TIGR02316 propion_prpE propion 99.0 2.4E-07 5.1E-12 107.0 31.5 63 401-467 431-516 (628)
52 TIGR03098 ligase_PEP_1 acyl-Co 99.0 1.3E-07 2.8E-12 105.4 27.9 129 307-467 276-438 (515)
53 PLN02736 long-chain acyl-CoA s 99.0 7.8E-09 1.7E-13 119.8 18.7 132 307-467 378-532 (651)
54 PRK06839 acyl-CoA synthetase; 99.0 2.7E-08 5.7E-13 110.3 21.3 62 402-467 338-415 (496)
55 PRK07787 acyl-CoA synthetase; 99.0 1.8E-07 3.9E-12 103.7 27.3 128 307-467 243-395 (471)
56 TIGR02275 DHB_AMP_lig 2,3-dihy 99.0 7.4E-08 1.6E-12 108.3 24.3 129 307-467 301-452 (527)
57 PRK13388 acyl-CoA synthetase; 99.0 8.9E-08 1.9E-12 108.4 24.8 129 318-467 279-424 (540)
58 COG0365 Acs Acyl-coenzyme A sy 99.0 9.5E-08 2.1E-12 107.7 24.6 130 304-468 289-441 (528)
59 PRK08633 2-acyl-glycerophospho 99.0 3.9E-08 8.5E-13 120.5 22.7 64 401-468 981-1064(1146)
60 PLN02860 o-succinylbenzoate-Co 99.0 2.4E-08 5.1E-13 113.6 19.0 60 404-467 382-458 (563)
61 PRK12467 peptide synthase; Pro 99.0 2.4E-08 5.2E-13 135.8 22.1 128 308-467 774-934 (3956)
62 PRK13383 acyl-CoA synthetase; 99.0 1.1E-07 2.5E-12 106.5 24.0 128 307-467 294-440 (516)
63 PRK06710 long-chain-fatty-acid 98.9 1.3E-07 2.7E-12 107.3 24.0 130 307-468 325-476 (563)
64 PRK13382 acyl-CoA synthetase; 98.9 2.8E-07 6.1E-12 104.2 26.5 128 307-467 314-460 (537)
65 PLN03051 acyl-activating enzym 98.9 1.4E-07 2.9E-12 105.9 23.7 44 420-467 358-401 (499)
66 PRK08751 putative long-chain f 98.9 7.8E-08 1.7E-12 108.9 22.0 129 307-468 331-482 (560)
67 PRK07768 long-chain-fatty-acid 98.9 2.3E-07 4.9E-12 104.7 25.7 64 401-468 380-459 (545)
68 PRK08315 AMP-binding domain pr 98.9 2.8E-07 6.2E-12 104.1 26.3 130 307-467 317-471 (559)
69 PRK12492 long-chain-fatty-acid 98.9 2.6E-07 5.7E-12 104.9 26.1 129 306-467 334-485 (562)
70 PLN02387 long-chain-fatty-acid 98.9 1.1E-07 2.4E-12 111.4 23.3 132 307-467 422-580 (696)
71 TIGR03443 alpha_am_amid L-amin 98.9 2E-08 4.4E-13 125.8 18.2 43 421-467 680-722 (1389)
72 PRK10252 entF enterobactin syn 98.9 2.7E-08 5.8E-13 123.7 19.1 64 401-468 796-882 (1296)
73 PLN02861 long-chain-fatty-acid 98.9 2.3E-08 4.9E-13 116.4 17.3 61 403-467 461-538 (660)
74 PRK10946 entE enterobactin syn 98.9 2E-07 4.4E-12 105.2 24.4 63 401-467 374-453 (536)
75 PLN02614 long-chain acyl-CoA s 98.9 2.5E-08 5.4E-13 116.2 17.1 132 307-467 388-541 (666)
76 PRK12316 peptide synthase; Pro 98.9 2.8E-08 6.1E-13 137.6 20.1 130 307-468 772-931 (5163)
77 PRK03640 O-succinylbenzoic aci 98.9 2.4E-07 5.2E-12 102.5 23.9 63 401-467 326-404 (483)
78 PRK06188 acyl-CoA synthetase; 98.9 5E-07 1.1E-11 101.4 26.7 63 401-467 359-437 (524)
79 PRK12406 long-chain-fatty-acid 98.9 8.1E-07 1.7E-11 99.3 27.3 128 307-467 273-423 (509)
80 PRK06087 short chain acyl-CoA 98.9 2E-07 4.2E-12 105.3 22.4 63 401-467 375-454 (547)
81 PRK12467 peptide synthase; Pro 98.9 6.5E-08 1.4E-12 131.7 21.2 130 307-468 3353-3516(3956)
82 PRK07769 long-chain-fatty-acid 98.9 2.6E-07 5.7E-12 106.6 23.1 64 400-468 411-508 (631)
83 PRK08276 long-chain-fatty-acid 98.9 6.6E-07 1.4E-11 99.7 25.5 129 305-467 262-413 (502)
84 PRK08043 bifunctional acyl-[ac 98.8 3.4E-07 7.4E-12 107.5 24.0 45 420-468 592-636 (718)
85 PRK05851 long-chain-fatty-acid 98.8 8E-08 1.7E-12 108.3 17.8 62 402-468 367-440 (525)
86 PRK05857 acyl-CoA synthetase; 98.8 4.8E-07 1E-11 102.4 24.1 63 401-467 368-446 (540)
87 PLN03052 acetate--CoA ligase; 98.8 6E-07 1.3E-11 105.8 25.8 44 420-467 590-633 (728)
88 PRK08308 acyl-CoA synthetase; 98.8 4.4E-07 9.6E-12 99.0 22.1 58 404-467 278-335 (414)
89 TIGR01923 menE O-succinylbenzo 98.8 6.9E-07 1.5E-11 97.4 23.6 58 406-467 291-364 (436)
90 PRK08279 long-chain-acyl-CoA s 98.8 1.4E-07 3.1E-12 108.0 18.7 64 400-467 396-483 (600)
91 TIGR02262 benz_CoA_lig benzoat 98.8 9.5E-07 2.1E-11 98.7 24.8 62 402-467 351-428 (508)
92 COG0318 CaiC Acyl-CoA syntheta 98.8 1.1E-07 2.4E-12 107.8 17.2 130 307-468 293-446 (534)
93 PTZ00342 acyl-CoA synthetase; 98.8 3.7E-07 8E-12 107.7 22.0 130 307-467 463-615 (746)
94 PRK05620 long-chain-fatty-acid 98.8 1.8E-06 4E-11 98.3 26.7 43 421-467 432-474 (576)
95 PRK06178 acyl-CoA synthetase; 98.8 8.9E-07 1.9E-11 100.5 23.7 62 402-467 409-486 (567)
96 PRK07824 O-succinylbenzoic aci 98.8 2.3E-06 5E-11 91.4 25.5 44 420-468 235-278 (358)
97 PRK08008 caiC putative crotono 98.8 1.2E-06 2.7E-11 97.9 24.2 63 401-467 360-442 (517)
98 PRK05691 peptide synthase; Val 98.8 2.2E-07 4.8E-12 127.6 21.3 130 307-468 1390-1550(4334)
99 PRK12316 peptide synthase; Pro 98.7 4.4E-07 9.6E-12 126.1 23.8 130 307-468 3313-3469(5163)
100 PLN02430 long-chain-fatty-acid 98.7 2.3E-07 5.1E-12 108.0 18.0 61 403-467 461-538 (660)
101 PRK07008 long-chain-fatty-acid 98.7 3.7E-06 8.1E-11 95.0 27.0 58 406-467 383-453 (539)
102 COG1022 FAA1 Long-chain acyl-C 98.7 2.1E-07 4.6E-12 106.4 16.8 134 307-488 355-507 (613)
103 PRK05691 peptide synthase; Val 98.7 6E-07 1.3E-11 123.5 23.8 64 401-468 4060-4147(4334)
104 PRK07798 acyl-CoA synthetase; 98.7 2.5E-06 5.5E-11 95.2 23.9 131 306-467 297-452 (533)
105 PRK06814 acylglycerophosphoeth 98.7 1.3E-06 2.8E-11 107.5 23.0 61 404-468 978-1055(1140)
106 PLN03102 acyl-activating enzym 98.7 5.2E-07 1.1E-11 103.2 17.4 59 405-467 390-464 (579)
107 PRK08180 feruloyl-CoA synthase 98.7 5.2E-07 1.1E-11 103.9 17.3 63 405-467 409-491 (614)
108 PRK09192 acyl-CoA synthetase; 98.7 3.7E-06 8.1E-11 96.0 23.9 63 401-468 405-483 (579)
109 KOG1176 Acyl-CoA synthetase [L 98.6 2.6E-06 5.5E-11 96.6 21.1 130 307-468 301-453 (537)
110 PTZ00216 acyl-CoA synthetase; 98.6 8.6E-07 1.9E-11 103.9 17.8 61 403-467 503-581 (700)
111 PRK12582 acyl-CoA synthetase; 98.6 5.6E-07 1.2E-11 103.9 15.9 64 403-466 419-502 (624)
112 KOG1177 Long chain fatty acid 98.6 1E-06 2.2E-11 95.7 16.3 64 400-467 425-505 (596)
113 PF00501 AMP-binding: AMP-bind 98.6 5.1E-07 1.1E-11 97.8 14.2 106 316-452 291-417 (417)
114 PRK06018 putative acyl-CoA syn 98.6 1.3E-05 2.8E-10 90.7 25.3 58 406-467 383-454 (542)
115 PLN02479 acetate-CoA ligase 98.5 8.5E-06 1.9E-10 92.8 22.3 58 406-467 401-474 (567)
116 KOG1175 Acyl-CoA synthetase [L 98.4 1.4E-05 3E-10 91.2 20.5 233 305-588 359-624 (626)
117 PRK13391 acyl-CoA synthetase; 98.4 1E-05 2.2E-10 90.7 19.2 128 307-468 277-427 (511)
118 PRK13390 acyl-CoA synthetase; 98.4 8.4E-06 1.8E-10 91.0 18.2 62 402-467 343-423 (501)
119 PRK07868 acyl-CoA synthetase; 98.4 8E-06 1.7E-10 99.6 17.5 140 306-468 721-881 (994)
120 PRK09029 O-succinylbenzoic aci 98.4 1.1E-05 2.4E-10 89.0 17.0 44 420-468 333-376 (458)
121 TIGR02372 4_coum_CoA_lig 4-cou 98.3 1E-05 2.2E-10 88.5 16.1 45 420-468 276-320 (386)
122 PRK07445 O-succinylbenzoic aci 98.3 1.1E-05 2.5E-10 89.5 16.3 61 404-468 298-369 (452)
123 KOG1256 Long-chain acyl-CoA sy 98.3 2.4E-06 5.1E-11 97.6 8.8 135 299-467 416-572 (691)
124 PRK05850 acyl-CoA synthetase; 98.3 3.9E-05 8.5E-10 87.4 19.0 64 400-468 390-481 (578)
125 PRK12476 putative fatty-acid-- 98.2 2.9E-05 6.2E-10 89.5 17.0 65 399-468 421-520 (612)
126 PRK08162 acyl-CoA synthetase; 97.9 0.00024 5.2E-09 80.2 17.2 58 407-468 388-461 (545)
127 KOG1179 Very long-chain acyl-C 97.9 0.00075 1.6E-08 75.3 19.0 225 315-575 368-623 (649)
128 PF04443 LuxE: Acyl-protein sy 97.8 0.0017 3.6E-08 70.7 19.3 80 36-127 32-116 (365)
129 KOG1180 Acyl-CoA synthetase [L 97.3 0.03 6.5E-07 62.8 21.7 146 307-489 404-574 (678)
130 COG1020 EntF Non-ribosomal pep 93.4 0.4 8.6E-06 55.5 10.4 63 401-467 561-640 (642)
131 PTZ00297 pantothenate kinase; 92.9 1.6 3.6E-05 55.6 15.1 56 407-467 825-881 (1452)
132 PF14535 AMP-binding_C_2: AMP- 91.4 0.4 8.7E-06 41.9 5.4 84 453-554 1-84 (96)
133 PRK09188 serine/threonine prot 80.3 2.6 5.6E-05 46.1 5.3 40 420-468 210-252 (365)
134 PRK07445 O-succinylbenzoic aci 58.7 8.9 0.00019 42.6 3.6 27 99-126 120-146 (452)
135 KOG1178 Non-ribosomal peptide 53.4 10 0.00022 46.7 3.0 45 420-468 455-499 (1032)
136 PRK12476 putative fatty-acid-- 40.9 17 0.00036 42.0 2.2 26 100-126 194-219 (612)
137 COG2139 RPL21A Ribosomal prote 37.4 26 0.00056 30.9 2.2 38 418-455 30-70 (98)
138 PRK05850 acyl-CoA synthetase; 34.2 25 0.00054 40.1 2.2 26 100-126 161-186 (578)
139 PF07311 Dodecin: Dodecin; In 32.1 1.3E+02 0.0028 24.8 5.4 49 454-503 13-62 (66)
140 PRK04306 50S ribosomal protein 29.0 40 0.00088 29.9 2.1 37 418-454 32-71 (98)
141 PTZ00189 60S ribosomal protein 28.5 39 0.00084 32.6 2.1 38 418-455 31-71 (160)
142 PRK08162 acyl-CoA synthetase; 26.7 33 0.00071 38.6 1.5 22 103-125 186-207 (545)
143 cd03483 MutL_Trans_MLH1 MutL_T 26.2 1.4E+02 0.003 27.4 5.3 45 425-471 30-74 (127)
144 PF09926 DUF2158: Uncharacteri 23.9 66 0.0014 25.3 2.2 19 421-442 1-19 (53)
145 PLN00190 60S ribosomal protein 22.9 58 0.0013 31.4 2.1 38 418-455 31-71 (158)
146 COG5475 Uncharacterized small 22.2 1E+02 0.0022 24.6 2.9 24 421-447 5-28 (60)
147 PF11454 DUF3016: Protein of u 21.2 2.2E+02 0.0047 27.1 5.5 56 402-459 47-112 (141)
148 PRK13390 acyl-CoA synthetase; 20.7 48 0.001 36.9 1.3 34 307-342 272-308 (501)
149 COG2026 RelE Cytotoxic transla 20.7 1.3E+02 0.0029 25.9 3.8 25 413-437 48-72 (90)
150 cd04931 ACT_PAH ACT domain of 20.6 3.8E+02 0.0082 23.2 6.6 58 458-525 25-82 (90)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=3.7e-149 Score=1240.80 Aligned_cols=610 Identities=91% Similarity=1.440 Sum_probs=569.0
Q ss_pred CCCCCCCCC-C-CCCchhhhcHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCChHHHhhCCCCCCChhhHhhhCCCCChh
Q 006862 1 MPEAPKNSY-P-SDYSLDEMNKKKLEFIENVTSNPDEVQKKVLSEILLRNAHVEYLQRNGLNGHTDRESFKKTMPVITYE 78 (628)
Q Consensus 1 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~gf~~i~~~edF~~~vPl~tYe 78 (628)
||++|++.. . ++....+++++.++.||+.++||.++|+++|++||++|++|+|||+|||++|+++++||++|||++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i~~~~~F~~~VPv~~Ye 80 (612)
T PLN02620 1 MPEAPKNSLLEVGDYNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYE 80 (612)
T ss_pred CCCcccccccccCCCccccchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHH
Confidence 788776654 2 13455667788899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCcccCCCcceeecccccCCCcccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEcc
Q 006862 79 DIQADINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQFIPGLDKGKGMYFLFIK 158 (628)
Q Consensus 79 dl~pyIeRi~~Ge~~~lL~~~pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~~~~~~ 158 (628)
|++|||+||++||.++|||++||++|++|||||||++|+||+|++++++++.++.++++++++++|++..||.||++|++
T Consensus 81 dl~pyI~Ri~~Ge~s~vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~ 160 (612)
T PLN02620 81 DIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIK 160 (612)
T ss_pred HhHHHHHHHHcCCCCCccCCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcccCcEEEEEecc
Confidence 99999999999998899999999999999999988999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCceeeeccccccccccccCCCCCCCcccCCCcccccCCChhhHHHHHHhhhcccCccccEEeecchHHHHHHH
Q 006862 159 SEAKTPGGLVARPVLTSYYKSCHFKERPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAI 238 (628)
Q Consensus 159 ~~~~t~~Gi~~g~~s~~~~~s~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~a~fa~~ll~~~ 238 (628)
.+.+|++|+|+|++++++|+|.+|++++.+++..|++|.++++++|..|+|||||||||+++++|..++|+|+++|++++
T Consensus 161 ~~~~T~~Gip~g~~st~~y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~ 240 (612)
T PLN02620 161 SEAKTPGGLVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 240 (612)
T ss_pred cCccCCCCcccccccchhhhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHH
Confidence 99999999999999999999999999998888899999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHhccCCCCCCChhhHHHHhhhcCCCHHHHHHHHHHhhhcCccccccccCCCCceeEEEEcCCccch
Q 006862 239 RFLEKHWPLVVKDIRTGTIDSQITDPSVRDAVMKILKPNPKLADFIENECRKDCWQGIITRLWPNTKYVDVIVTGTMSQY 318 (628)
Q Consensus 239 ~~Le~~w~~l~~dI~~Gtl~~~i~~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~~~y 318 (628)
++|+++|++||+||++|+++++++++++|.+|.+.|+|||++|++|+.+|.+.+|+||+++|||||++|+||+||+|++|
T Consensus 241 ~~Le~~w~~L~~DI~~G~ls~~itd~~~R~av~~~L~p~pelA~~i~~~c~~~~w~gii~rLWP~lk~I~~~~tGsm~~Y 320 (612)
T PLN02620 241 RFLEKHWTLLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQY 320 (612)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCCCHHHHHHHHhhcCCCHHHHHHHHHHhccccccCcHHHhCCCCcEEEEECCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCceeccccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCCccccccccceeee
Q 006862 319 IPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEKERQELVD 398 (628)
Q Consensus 319 ~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~ 398 (628)
++.|++|+||+|+++.+|+||||+||||++|.|+|++++|+|+|+++||||||+++.+.....++.+.+.++.+++++|+
T Consensus 321 ~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~ 400 (612)
T PLN02620 321 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVD 400 (612)
T ss_pred HHHHHHHcCCCccccccccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999885321000000000111234577999
Q ss_pred ccccCCCceEEEEEeeccceEeeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCce
Q 006862 399 LVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAA 478 (628)
Q Consensus 399 l~eve~G~~YeLVvTt~~GLyRYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~ 478 (628)
++|||+|++|||||||++||||||+||||+|+||||++|+|+|+||++.++|++|||++|++|+.||.+|.+.|.+.|++
T Consensus 401 l~ev~~G~~YelvvTt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~ 480 (612)
T PLN02620 401 LVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAS 480 (612)
T ss_pred HHHccCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888777999
Q ss_pred EEeEEEeecCCCCCceEEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccCCCccCCeEEEEcCCccHHHHHHH
Q 006862 479 VSEYTSYADTTTVPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKSIGPLEIKIVEPGTFDKLMDY 558 (628)
Q Consensus 479 l~eft~~~d~~~~p~~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~l~pl~v~~V~~GtF~~l~~~ 558 (628)
|+|||+++|.++.||||+||||+...+...++.+++++||..||++||.+|+.+|..+++||||+|++|++|||+++|++
T Consensus 481 l~dyts~~d~~~~PghYvl~~El~~~~~~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~ 560 (612)
T PLN02620 481 LTEYTSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560 (612)
T ss_pred eeeEEeccccCCCCCceEEEEEEecCCCCCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHH
Confidence 99999999999999999999999532323356779999999999999999999997777899999999999999999999
Q ss_pred HHhcCCCCCCCCCCcccCCHhHHHHHhhccccccccCCCCCCCccccccccc
Q 006862 559 AISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVAGHKQWSSN 610 (628)
Q Consensus 559 ~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~v~~~~~s~~~~~~~~~~~~~~~~ 610 (628)
++++|++.||||+|||+++++++++|+++|+++|||+++|+|.|++++||++
T Consensus 561 ~~~~G~s~~QyK~Pr~v~~~~~~~~l~~~v~~~~~s~~~~~~~~~~~~~~~~ 612 (612)
T PLN02620 561 AISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHKQWCSN 612 (612)
T ss_pred HHHcCCccccccCceEecCHHHHHHHHhhhheeeccccCCCCCccccCcCCC
Confidence 9999999999999999999999999999999999999999999999999974
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=1.4e-142 Score=1190.93 Aligned_cols=588 Identities=59% Similarity=1.023 Sum_probs=546.4
Q ss_pred hhhcHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCChHHHhhCCCCCCChhhHhhhCCCCChhhhHHHHHHHHcCCCCCc
Q 006862 16 DEMNKKKLEFIENVTSNPDEVQKKVLSEILLRNAHVEYLQRNGLNGHTDRESFKKTMPVITYEDIQADINRIANGDTSPI 95 (628)
Q Consensus 16 ~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~gf~~i~~~edF~~~vPl~tYedl~pyIeRi~~Ge~~~l 95 (628)
.+++++.++.+|..++||.++|+++|++||++|++|+|||+|++ ++.++++||++|||++|||++|||+||++||.+++
T Consensus 7 ~~~~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~-~i~~~e~Fk~~VPv~~Yedl~pyI~Ri~~Ge~~~l 85 (606)
T PLN02247 7 PNDNEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLD-GESDKQSFKNKVPVVNYEDIKPCIERIANGESSSI 85 (606)
T ss_pred CcchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCc-cCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCce
Confidence 34568889999999999999999999999999999999999854 99999999999999999999999999999998777
Q ss_pred ccCCCcceeecccccCCCcccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEccCCccCCCCceeeecccc
Q 006862 96 LCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQFIPGLDKGKGMYFLFIKSEAKTPGGLVARPVLTS 175 (628)
Q Consensus 96 L~~~pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~~~~~~~~~~t~~Gi~~g~~s~~ 175 (628)
|+++||.+|++|||||||++|+||+|+++++++.+++++|+.++++..|++..||.||++|.+++.+|++|+|+|+++++
T Consensus 86 lt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~~t~ 165 (606)
T PLN02247 86 ISAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTS 165 (606)
T ss_pred eCCCCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCcccccccch
Confidence 88999999999999998899999999999999999999999999998899999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCcccCCCcccccCCChhhHHHHHHhhhcccCccccEEeecchHHHHHHHHHHhhhHHHHHHHHHhc
Q 006862 176 YYKSCHFKERPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWPLVVKDIRTG 255 (628)
Q Consensus 176 ~~~s~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~a~fa~~ll~~~~~Le~~w~~l~~dI~~G 255 (628)
++++.+|++++..++..|++|.++++++|..|+|||||||||.+++++..++|+|+++|++++++|+++|++||+||++|
T Consensus 166 y~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~~DI~~G 245 (606)
T PLN02247 166 YYKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTG 245 (606)
T ss_pred hhccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999998887789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhhHHHHhhhc-CCCHHHHHHHHHHhhhcCccccccccCCCCceeEEEEcCCccchHHHHHhhcCCCceecc
Q 006862 256 TIDSQITDPSVRDAVMKIL-KPNPKLADFIENECRKDCWQGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCT 334 (628)
Q Consensus 256 tl~~~i~~~~~r~~l~~~l-~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~~~y~~~l~~~~~g~p~~~~ 334 (628)
++++++++|++|.++.+.+ +|||++|++|+.+|.+.+|.|++++|||||++|+||+||+|++|++.|++|+||+|+++.
T Consensus 246 ~ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~ 325 (606)
T PLN02247 246 CVSDWITDPSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVST 325 (606)
T ss_pred CcccccCCHHHHHHHhhcccCCCHHHHHHHHHHhcccCccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecc
Confidence 9999999999999999999 599999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCccc---CCCCcc--ccccccceeeeccccCCCceEE
Q 006862 335 MYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANS---ISMPKS--LNEKERQELVDLVDVKLGQEYE 409 (628)
Q Consensus 335 ~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~---~~~~~~--~~~~~~~~~v~l~eve~G~~Ye 409 (628)
+|+||||+||||++|.|+|++++|+|+|+++||||||+++.+..... .+.... +.-.+++++|+++|||+|++||
T Consensus 326 ~Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~Ye 405 (606)
T PLN02247 326 MYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYE 405 (606)
T ss_pred cccccceEEEeccCcCCCccCCceeecCCcEEEEEeecCCCcccccccccccccccccccccccCceecHHHccCCCeEE
Confidence 99999999999999999999999999999999999998754310000 000000 0002346699999999999999
Q ss_pred EEEeeccceEeeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecCC
Q 006862 410 LVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADTT 489 (628)
Q Consensus 410 LVvTt~~GLyRYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~ 489 (628)
|||||++||||||+||||+|+||||++|+|+|+||++.++|++|||++|++|++||.+|.+.+++.++.|+|||+++|.+
T Consensus 406 lVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~d~ts~~d~~ 485 (606)
T PLN02247 406 LVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTS 485 (606)
T ss_pred EEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeeeeeecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999987777789999999999999
Q ss_pred CCCceEEEEEEEeeCCC---CCCCcchHHHHHHHHHHHhChhhHhcccCCCccCCeEEEEcCCccHHHHHHHHHhcCCCC
Q 006862 490 TVPGHYVLYWELSLNGT---TPIPPSVFEDCCLTIEESLNSVYRQGRVCDKSIGPLEIKIVEPGTFDKLMDYAISLGASI 566 (628)
Q Consensus 490 ~~p~~Yvl~~El~~~~~---~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~l~pl~v~~V~~GtF~~l~~~~~~~G~~~ 566 (628)
+.||||+||||++..+. ...+..+|++||..||++||.+|+.+|..+|+||||+|++|++|||+++|++++++|++.
T Consensus 486 ~~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~~igPLeirvv~~GtF~~l~~~~~~~G~s~ 565 (606)
T PLN02247 486 SIPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSV 565 (606)
T ss_pred CCCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHhhHHHHHHhhccCcCCCcEEEEeCCChHHHHHHHHHHcCCCc
Confidence 99999999999964211 123567899999999999999999999776799999999999999999999999999999
Q ss_pred CCCCCCcccCCHhHHHHHhhccccccccCCCCCCCccc
Q 006862 567 NQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVAGH 604 (628)
Q Consensus 567 ~Q~K~Pr~~~~~~~~~~L~~~v~~~~~s~~~~~~~~~~ 604 (628)
+|||+|||+++++++++|+++|+++|||+++|+|.|++
T Consensus 566 ~Q~K~Pr~v~~~~~~~~l~~~v~~~~~s~~~~~~~~~~ 603 (606)
T PLN02247 566 NQYKTPRCIKSEEALKILDSRVIGRFFSKRVPFWEPFG 603 (606)
T ss_pred ccccCceEecCHHHHHHHHhhhheeeccccCCCCCccc
Confidence 99999999999999999999999999999999999974
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=7.4e-132 Score=1113.73 Aligned_cols=574 Identities=62% Similarity=1.061 Sum_probs=533.3
Q ss_pred hhhcHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCChHHHhhCCCCCCChhhHhhhCCCCChhhhHHHHHHHHcCCCCCc
Q 006862 16 DEMNKKKLEFIENVTSNPDEVQKKVLSEILLRNAHVEYLQRNGLNGHTDRESFKKTMPVITYEDIQADINRIANGDTSPI 95 (628)
Q Consensus 16 ~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~gf~~i~~~edF~~~vPl~tYedl~pyIeRi~~Ge~~~l 95 (628)
.+++++.++.+|+.++||+++|+++|++||++|++|+|||+|||++|+++++||++|||++|||++|||+||++||.++|
T Consensus 17 ~~~~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i~~~~~F~~~VPv~~Yedl~pyIeRi~~Ge~~~v 96 (597)
T PLN02249 17 SEKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDRSPI 96 (597)
T ss_pred CCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCce
Confidence 34457789999999999999999999999999999999999999999999999999999999999999999999998779
Q ss_pred ccCCCcceeecccccCCCcccccccCHHHHHH--HHHHHHHHHHHHhhcCCCCCCCCeEEEEEccCCccCCCCceeeecc
Q 006862 96 LCSKPISEFLTSSGTSGGERKLMPTIEEELER--RSLLYSLLMPVMSQFIPGLDKGKGMYFLFIKSEAKTPGGLVARPVL 173 (628)
Q Consensus 96 L~~~pi~~f~~TSGTT~G~~K~IP~t~~~l~~--~~~~~~~~~~~~~~~~p~~~~Gk~l~~~~~~~~~~t~~Gi~~g~~s 173 (628)
||++||.+|++|||||||++|+||+|++++++ +.+....+ .+++..|+++.||.|+++|++.+.+|++|+|+|+++
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~--~~~~~~~~l~~Gk~l~~~~~~~~~~t~gG~p~~~~~ 174 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMP--VMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPAL 174 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHH--HHhccCCccccCcEEEEEeccccccCCCCCccCccc
Confidence 99999999999999999999999999999984 34444444 555557899999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCcccCCCcccccCCChhhHHHHHHhhhcccCccccEEeecchHHHHHHHHHHhhhHHHHHHHHH
Q 006862 174 TSYYKSCHFKERPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWPLVVKDIR 253 (628)
Q Consensus 174 ~~~~~s~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~a~fa~~ll~~~~~Le~~w~~l~~dI~ 253 (628)
+.++++.+|++++. ...|++|.+++.++|..|+|||||||||.+++++..|++.||+.+++++++|+++|++||+||+
T Consensus 175 ~~~~~~~~f~~~~~--~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~~dI~ 252 (597)
T PLN02249 175 TSYYKSDHFRTSDY--DNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDIS 252 (597)
T ss_pred cccccccccccccc--cccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888888887764 6689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCChhhHHHHhhhc-CCCHHHHHHHHHHhhhcCccccccccCCCCceeEEEEcCCccchHHHHHhhcCCCcee
Q 006862 254 TGTIDSQITDPSVRDAVMKIL-KPNPKLADFIENECRKDCWQGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLV 332 (628)
Q Consensus 254 ~Gtl~~~i~~~~~r~~l~~~l-~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~~~y~~~l~~~~~g~p~~ 332 (628)
+|++++++++|++|.++..++ .|+|++|++|+++|.+.+|+|++++|||||++|+||+||+|++|++.|++|+|+++++
T Consensus 253 ~g~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~~~~ 332 (597)
T PLN02249 253 TGTLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMA 332 (597)
T ss_pred hCCCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccccccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCCCccc
Confidence 999999999999999999988 5999999999999998889999999999999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCCccccccccceeeeccccCCCceEEEEE
Q 006862 333 CTMYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEKERQELVDLVDVKLGQEYELVV 412 (628)
Q Consensus 333 ~~~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVv 412 (628)
+++|+||||+||+|++|.|+|++++|+|+|+++||||||+++.+. +..+++++|+++|||+|++|||||
T Consensus 333 ~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~-----------~~~~~~~~v~l~eVe~G~~Y~lVv 401 (597)
T PLN02249 333 STIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGD-----------GALDETSLVELADVEVGKEYELVI 401 (597)
T ss_pred cccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecccCCc-----------ccCCCCcEecHHHcCCCCeEEEEE
Confidence 999999999999999999999999999999999999999875321 011347899999999999999999
Q ss_pred eeccceEeeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCC
Q 006862 413 TTYAGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVP 492 (628)
Q Consensus 413 Tt~~GLyRYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p 492 (628)
||++|||||++||+|+|+||||++|+|+|+||+++++|++|||++|+++++||.+|.+.+++.|+.|.|||++++.++.|
T Consensus 402 TT~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~~~~~~~p 481 (597)
T PLN02249 402 TTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIP 481 (597)
T ss_pred EcccceeEeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEEecCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999998877777899999999999988789
Q ss_pred ceEEEEEEEeeCCCC--CCCcchHHHHHHHHHHHhChhhHhcccCCCccCCeEEEEcCCccHHHHHHHHHhcCCCCCCCC
Q 006862 493 GHYVLYWELSLNGTT--PIPPSVFEDCCLTIEESLNSVYRQGRVCDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYK 570 (628)
Q Consensus 493 ~~Yvl~~El~~~~~~--~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~l~pl~v~~V~~GtF~~l~~~~~~~G~~~~Q~K 570 (628)
+||+||||++..+.. +.+.+.+++||..+|++||.+|+.+|.++++|+||+|++|++|+|++||++++++|+++||||
T Consensus 482 ~Hyvl~wei~~~~~~~~~~~~~~~~~~~~~~e~~ln~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K 561 (597)
T PLN02249 482 GHYVIYWELLGRDQSNALPSDEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYK 561 (597)
T ss_pred CceEEEEEEeccccccCCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcC
Confidence 999999999421112 356778999999999999999999997767999999999999999999999999999999999
Q ss_pred CCcccCCHhHHHHHhhccccccccCCCCCCCccc
Q 006862 571 TPRCVKFAPIIELLNSRVVSNYFSPKCPKWVAGH 604 (628)
Q Consensus 571 ~Pr~~~~~~~~~~L~~~v~~~~~s~~~~~~~~~~ 604 (628)
+|||+++++++++|+++|+++|+|+++|.|.|++
T Consensus 562 ~Prl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 595 (597)
T PLN02249 562 VPRCVSLTPIMELLDSRVVSAHFSPSLPHWSPER 595 (597)
T ss_pred CceEeCCHHHHHHHHhhhheeeccccCCCCCCCC
Confidence 9999999999999999999999999999999973
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=3.4e-115 Score=976.27 Aligned_cols=515 Identities=38% Similarity=0.676 Sum_probs=409.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhcCCChHHHhhCCCCCCChhh--HhhhCCCCChhhhHHHHHHHHcCCCCCcccCC
Q 006862 22 KLEFIENVTSNPDEVQKKVLSEILLRNAHVEYLQRNGLNGHTDRES--FKKTMPVITYEDIQADINRIANGDTSPILCSK 99 (628)
Q Consensus 22 ~~~~~e~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~gf~~i~~~ed--F~~~vPl~tYedl~pyIeRi~~Ge~~~lL~~~ 99 (628)
.+++|++.++||+++|+++|++||++|++|+|||+|||++|++++| ||++|||++||||+|||+||++||. +|||++
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge~-~vL~~~ 80 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGIRSVEDESFRKRVPITDYEDYRPYIERIAEGEE-NVLTPG 80 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S----HHHHHHHHS--BEHHHHHHHHHHHHTT---CCTSSS
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCCCCcchHHHHHhCCCccHHHHHHHHHHHhcCCC-CCCCCC
Confidence 4799999999999999999999999999999999999999999999 9999999999999999999999996 699999
Q ss_pred CcceeecccccCCCcccccccCHHHHHHHH--HHHHHHHHHHhhcCCCC-CCCCeEEE--EEccCCccCCCCceeeeccc
Q 006862 100 PISEFLTSSGTSGGERKLMPTIEEELERRS--LLYSLLMPVMSQFIPGL-DKGKGMYF--LFIKSEAKTPGGLVARPVLT 174 (628)
Q Consensus 100 pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~--~~~~~~~~~~~~~~p~~-~~Gk~l~~--~~~~~~~~t~~Gi~~g~~s~ 174 (628)
|+.+|++||||||+++|+||+|++++..+. .+...|...+.+++|.. ..||.+++ .+.+...+|++|+|+|++|+
T Consensus 81 ~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s~ 160 (528)
T PF03321_consen 81 PPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSISG 160 (528)
T ss_dssp --SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HHH
T ss_pred CCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEecccc
Confidence 999999999999666999999999999866 66777777788899987 67984444 44567788999999999999
Q ss_pred cccccccccCCCCCCCcccCCCcccccCCChhhHHHHHHhhhcccCccccEEeecchHHHHHHHHHHhhhHHHHHHHHHh
Q 006862 175 SYYKSCHFKERPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWPLVVKDIRT 254 (628)
Q Consensus 175 ~~~~s~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~a~fa~~ll~~~~~Le~~w~~l~~dI~~ 254 (628)
.++++ .+......|++|.+++.+.|.++++||||||+|.++++|+.|+++|+++|+.++++|+++|+++|+||++
T Consensus 161 ~~~~~-----~~~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~ 235 (528)
T PF03321_consen 161 IPYRM-----IPPWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRD 235 (528)
T ss_dssp HHHT-------SCCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhh-----ChHHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcC
Confidence 87762 1111124899999999999999999999999999889999999999999999999999999999999999
Q ss_pred ccCCCCCCChhhHHHHhhhcCCCHHHHHHHHHHhhhcCccccccccCCCCceeEEEEcCCccchHHHHHhhcCCCceecc
Q 006862 255 GTIDSQITDPSVRDAVMKILKPNPKLADFIENECRKDCWQGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCT 334 (628)
Q Consensus 255 Gtl~~~i~~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~~~y~~~l~~~~~g~p~~~~ 334 (628)
|+++ .++|||+||++|+++|+++ .|++++|||||++|.||.+|+|.+|+++|++++|++++++.
T Consensus 236 G~~~--------------~~~p~p~rA~~L~~~~~~~--~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~ 299 (528)
T PF03321_consen 236 GTLS--------------LLRPNPERAAELRAEFEKG--RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSK 299 (528)
T ss_dssp TS----------------C-S--HHHHHHHHHHHCCS--TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-
T ss_pred Cccc--------------cCCCCHHHHHHHHHhhccc--CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceeec
Confidence 9987 4578999999999999987 79999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCCccccccccceeeeccccCCCceEEEEEee
Q 006862 335 MYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT 414 (628)
Q Consensus 335 ~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt 414 (628)
+|+||||+||+|+++ +..+|+|+|+.+||||||+++.+. ...++++++.++|||+|++|||||||
T Consensus 300 ~y~ASEg~i~i~~~~----~~~~~~l~~~~~ffEFip~~~~~~-----------~~~~~~~~l~~~ele~G~~YelviTt 364 (528)
T PF03321_consen 300 GYGASEGFIGIPLDP----EDPGYVLAPDSGFFEFIPVDEDEQ-----------NPSEQPKTLLLHELEVGEEYELVITT 364 (528)
T ss_dssp EEEETTEEEEEES-C----CC--EEE-TTSSEEEEEE-STT------------------SSSEEGGG--TT-EEEEEEES
T ss_pred cccccceEEEEecCC----CCCceEeecCCeEEEEEeccCCcc-----------cccCCCceecHHHhcCCCeEEEEEec
Confidence 999999999999883 668999999999999999986531 01356899999999999999999999
Q ss_pred ccceEeeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeec-CCCCCc
Q 006862 415 YAGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYAD-TTTVPG 493 (628)
Q Consensus 415 ~~GLyRYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d-~~~~p~ 493 (628)
.+||||||+||||+|+||++++|+|+|+||.++++|++|||++|++|++||.++++ +.|+.+.+|++.++ .++.||
T Consensus 365 ~~GLyRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~~~~~~~ 441 (528)
T PF03321_consen 365 NSGLYRYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDPSSGNPP 441 (528)
T ss_dssp TTS-SSEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE--SSSSB
T ss_pred ccceeeeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeecccCCCC
Confidence 99999999999999999999999999999999999999999999999999999863 68999999999999 678999
Q ss_pred eEEEEEEEeeCCCCCCCcchHHHHHHHHHHHh---ChhhHhcccCCCccCCeEEEEcCCccHHHHHHHHHhc-CCCCCCC
Q 006862 494 HYVLYWELSLNGTTPIPPSVFEDCCLTIEESL---NSVYRQGRVCDKSIGPLEIKIVEPGTFDKLMDYAISL-GASINQY 569 (628)
Q Consensus 494 ~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~L---n~~Y~~~R~~~~~l~pl~v~~V~~GtF~~l~~~~~~~-G~~~~Q~ 569 (628)
||++|||++. . ++.++.||..||++| |++|+.+|..+|+|+||+|++|++|+|++|+++++++ |++.+||
T Consensus 442 ~Y~~~~e~~~---~---~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~ 515 (528)
T PF03321_consen 442 HYVLFWELEG---E---PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQY 515 (528)
T ss_dssp EEEEEEEECS-------HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS-
T ss_pred ceEEEEEeCC---C---chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccce
Confidence 9999999973 1 457889999999999 9999999965489999999999999999999999999 9999999
Q ss_pred CCCcccCCHhHHH
Q 006862 570 KTPRCVKFAPIIE 582 (628)
Q Consensus 570 K~Pr~~~~~~~~~ 582 (628)
|+|||++++++.+
T Consensus 516 K~pr~~~~~~~~~ 528 (528)
T PF03321_consen 516 KVPRLIRDREFVE 528 (528)
T ss_dssp ---SS--TCHHHH
T ss_pred eCccccCccccCC
Confidence 9999999998853
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.94 E-value=1.2e-24 Score=234.77 Aligned_cols=394 Identities=17% Similarity=0.214 Sum_probs=246.5
Q ss_pred cCHHHHHHHHHHHHHHh-cCCChHHHhh----CCC--CCCChhhHhhhCCCCChhhhHHHHH-HHHcCCCCCcccCCCcc
Q 006862 31 SNPDEVQKKVLSEILLR-NAHVEYLQRN----GLN--GHTDRESFKKTMPVITYEDIQADIN-RIANGDTSPILCSKPIS 102 (628)
Q Consensus 31 ~~~~~~Q~~~L~~iL~~-n~~T~ygr~~----gf~--~i~~~edF~~~vPl~tYedl~pyIe-Ri~~Ge~~~lL~~~pi~ 102 (628)
+..++.|++.|+.+++. .+|++|+|++ |+. .|.+.+|+ .++|+++.++++.... ++.+... ..+.
T Consensus 21 ~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl-~klP~t~K~~lre~ypf~~~~~~~------~~i~ 93 (438)
T COG1541 21 KELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDL-AKLPFTTKDDLRENYPFGDFAVPK------EEIV 93 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHH-HhCCCCcHHHHHHhCCcccccccc------cceE
Confidence 34778999999999996 8999999998 443 58899999 5899999999988877 6655543 4455
Q ss_pred eeecccccCCCcccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEccCCccCCCCceeeeccccccccccc
Q 006862 103 EFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQFIPGLDKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSCHF 182 (628)
Q Consensus 103 ~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~~~~~~~~~~t~~Gi~~g~~s~~~~~s~~~ 182 (628)
.+..||||| |+|+.+|+|...+......+ ...+ ..-+...|..+...++ .+...+|+ +.+
T Consensus 94 ~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~--aR~~---~~~g~~~gd~v~~~~~--yGl~tgg~------~~~------ 153 (438)
T COG1541 94 RIHASSGTT-GKPTVFGYTAKDIERWAELL--ARSL---YSAGVRKGDKVQNAYG--YGLFTGGL------GLH------ 153 (438)
T ss_pred EEEccCCCC-CCceeeecCHHHHHHHHHHH--HHHH---HHccCCCCCEEEEEee--eccccCCc------hhH------
Confidence 689999999 89999999998876532211 1111 1124555655554433 11112221 001
Q ss_pred cCCCCCCCcccCCCcccccCCChhhHHHHHHhhhcccCccccEEeecchHHHHHHHHHHhhhHHHHHHHHHhccCCCCCC
Q 006862 183 KERPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWPLVVKDIRTGTIDSQIT 262 (628)
Q Consensus 183 ~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~a~fa~~ll~~~~~Le~~w~~l~~dI~~Gtl~~~i~ 262 (628)
|..-.+|+ .+...++..+-+.+ ++++|.. +.+
T Consensus 154 ---------------------------~ga~rig~-------~vip~~~g~~~~~~--------~l~~df~-----~tv- 185 (438)
T COG1541 154 ---------------------------YGAERIGA-------TVIPISGGNTERQL--------ELMKDFK-----PTV- 185 (438)
T ss_pred ---------------------------HHHHhhCE-------EEEccCCccHHHHH--------HHHHhcC-----CcE-
Confidence 11111111 11122222222222 2222333 211
Q ss_pred ChhhHHHHhhhcCCCHHHHHHHHHHhhhcCccccccccCCCCceeEEEEcCC---ccchHHHHHhhcCCCceeccccccc
Q 006862 263 DPSVRDAVMKILKPNPKLADFIENECRKDCWQGIITRLWPNTKYVDVIVTGT---MSQYIPILDYYSNGLPLVCTMYASS 339 (628)
Q Consensus 263 ~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~---~~~y~~~l~~~~~g~p~~~~~Y~aS 339 (628)
+.+.++-...+|+++++... ...++= +..++.|+ .+.-++.+++.+ |++.+ +.||+|
T Consensus 186 -------I~~tps~~l~lae~~~~~G~------~~~~~~-----lk~~i~gaE~~see~R~~ie~~~-g~~~~-diYGlt 245 (438)
T COG1541 186 -------IAATPSYLLYLAEEAEEEGI------DPDKLS-----LKKGIFGAEPWSEEMRKVIENRF-GCKAF-DIYGLT 245 (438)
T ss_pred -------EEEChHHHHHHHHHHHHcCC------Chhhcc-----eeEEEEecccCCHHHHHHHHHHh-CCcee-eccccc
Confidence 11111112334554444320 111222 45556565 367788999999 89998 999999
Q ss_pred ccc-ccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCCccccccccceeeeccccCCCceEEEEEeec---
Q 006862 340 ECY-FGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY--- 415 (628)
Q Consensus 340 Eg~-~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~--- 415 (628)
|++ .| -.+|. ...++|+..++-++|.++++..+ .|..|+.||||+||.
T Consensus 246 E~~g~g---~~eC~-~~~glhi~eD~~~~Ei~dP~t~e------------------------~l~dge~GelV~T~L~~~ 297 (438)
T COG1541 246 EGFGPG---AGECT-ERNGLHIWEDHFIFEIVDPETGE------------------------QLPDGERGELVITTLTKE 297 (438)
T ss_pred cccCCc---ccccc-cccCCCcchhhceeeeecCCcCc------------------------cCCCCCeeEEEEEecccc
Confidence 994 34 24676 34489998898999999987543 367899999999984
Q ss_pred -cceEeeeeCCEEEEeccc----CCCCEE-EEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecCC
Q 006862 416 -AGLYRYRVGDVLRVAGFK----NKAPQF-NFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADTT 489 (628)
Q Consensus 416 -~GLyRYr~GDvv~v~gf~----~~~P~~-~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~ 489 (628)
..|+||||||++.+.... +..|+| ++.||.+|++.+.|.++.+.+++.++.+... +.. +|.+.....
T Consensus 298 ~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~------~~~-~yqi~~~~~ 370 (438)
T COG1541 298 GMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE------VTP-HYQIILTRN 370 (438)
T ss_pred CcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC------CCc-eEEEEEecC
Confidence 459999999999998633 223444 8899999999999999999999999977532 111 888876653
Q ss_pred CCCceEEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccCCCccCCeEEEEcCCccHHHHHHHHHhcCCCCCCC
Q 006862 490 TVPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQY 569 (628)
Q Consensus 490 ~~p~~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~l~pl~v~~V~~GtF~~l~~~~~~~G~~~~Q~ 569 (628)
..-..-++-+|++. . ........+++..+...+- .-..-.++|.+|.+|+.++.. |
T Consensus 371 ~~~d~L~V~vE~~~--~-~~~~~~~~~~~~~l~~~~~---------~~~~~~~~v~~v~~g~l~r~~------~------ 426 (438)
T COG1541 371 GGLDELTVRVELEN--E-AEELEDERRLAKKLIKNIK---------SELGVRVEVELVEPGELPRTE------G------ 426 (438)
T ss_pred CCCceEEEEEEecC--c-ccchHHHHHHHHHHHHHHH---------hhcCCceEEEEEeccceeccc------C------
Confidence 34445667777752 1 1111122222223322221 124578899999999988633 2
Q ss_pred CCCcccCCH
Q 006862 570 KTPRCVKFA 578 (628)
Q Consensus 570 K~Pr~~~~~ 578 (628)
|.+|++..+
T Consensus 427 K~krvvd~r 435 (438)
T COG1541 427 KAKRVVDKR 435 (438)
T ss_pred ceeEEEEec
Confidence 788887544
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.92 E-value=2e-23 Score=230.89 Aligned_cols=392 Identities=15% Similarity=0.134 Sum_probs=219.0
Q ss_pred CHHHHHHHHHHHHHHh-cCCChHHHhh----CCC--CCCChhhHhhhCCCCChhhhHHHHHHHHcCCCCCcc--cCCCcc
Q 006862 32 NPDEVQKKVLSEILLR-NAHVEYLQRN----GLN--GHTDRESFKKTMPVITYEDIQADINRIANGDTSPIL--CSKPIS 102 (628)
Q Consensus 32 ~~~~~Q~~~L~~iL~~-n~~T~ygr~~----gf~--~i~~~edF~~~vPl~tYedl~pyIeRi~~Ge~~~lL--~~~pi~ 102 (628)
..++.|.+.|+++|+. .++++|||++ |+. +|++++||+ ++|+++++|++..-.-. ++.=.++ ..+.+.
T Consensus 13 ~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~~~~~~~~~~~~i~ 89 (445)
T TIGR03335 13 ELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TDDFMFKSADWKDIY 89 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--ccccccccCCHHHeE
Confidence 4678999999999996 5899999995 665 689999995 79999999998653100 0000111 123344
Q ss_pred eeecccccCCCcccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEccCCccCCCCceeeeccccccccccc
Q 006862 103 EFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQFIPGLDKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSCHF 182 (628)
Q Consensus 103 ~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~~~~~~~~~~t~~Gi~~g~~s~~~~~s~~~ 182 (628)
.+..||||| |+||.+++|.+.+.......... + ...++..|..+...+ + -|.-+| .
T Consensus 90 ~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r~--~---~~~G~~~gD~vl~~~-~------~~~~~g---~-------- 145 (445)
T TIGR03335 90 TIHETSGTS-GTPKSFFLTWDDWKRYAEKYARS--F---VSQGFTAGDRMVICA-S------YGMNVG---A-------- 145 (445)
T ss_pred EEEeCCCCC-CCcceeeecHHHHHHHHHHHHHH--H---HHcCCCCCCeEEEEe-c------CCcchh---H--------
Confidence 677799999 89999999998765432211110 0 012344443332221 0 010000 0
Q ss_pred cCCCCCCCcccCCCcccccCCChhhHHHHHHhhhcccCccccEEeecchHHHHHHHHHHhhhHHHHHHHHHhccCCCCCC
Q 006862 183 KERPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWPLVVKDIRTGTIDSQIT 262 (628)
Q Consensus 183 ~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~a~fa~~ll~~~~~Le~~w~~l~~dI~~Gtl~~~i~ 262 (628)
....+..+.+|.. .+. ...+ +..++.|+.....--+.
T Consensus 146 -----------------------~~~~~~~~~~Ga~------vi~---~~~~-----------~~~~~~i~~~~~t~l~~ 182 (445)
T TIGR03335 146 -----------------------NTMTLAAREVGMS------IIP---EGKC-----------TFPIRIIESYRPTGIVA 182 (445)
T ss_pred -----------------------HHHHHHHHHcCCE------EEc---CCch-----------hHHHHHHHHhCCCEEEE
Confidence 0000111111110 000 0000 01122233222111000
Q ss_pred ChhhHHHHhhhcCCCHHHHHHHHHHhhhcCccccccccCCCCceeEEEEcCCc---cchHHHHHhhcCCCceeccccccc
Q 006862 263 DPSVRDAVMKILKPNPKLADFIENECRKDCWQGIITRLWPNTKYVDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASS 339 (628)
Q Consensus 263 ~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aS 339 (628)
.| +....+|+.+ .+. |+-.. .++ ++.+++|+. ...+..+++.+ |++++ +.||+|
T Consensus 183 ~p----------s~ll~La~~~----~~~---g~~~~-~~~---lr~ii~gGE~l~~~~r~~ie~~~-g~~v~-~~YG~T 239 (445)
T TIGR03335 183 SV----------FKLLRLARRM----KAE---GIDPA-ESS---IRRLVVGGESFADESRNYVEELW-GCEVY-NTYGST 239 (445)
T ss_pred CH----------HHHHHHHHHH----HHc---CCCcc-cCc---ceEEEEcCCCCCHHHHHHHHHHh-CCcEE-ecCChh
Confidence 11 1112233332 221 22111 234 556666653 33466788888 79999 899999
Q ss_pred cccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCCccccccccceeeeccccCCCceEEEEEeec----
Q 006862 340 ECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY---- 415 (628)
Q Consensus 340 Eg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~---- 415 (628)
|+.++ ..|. ...+||+..+..++|.++++... .|.+|+.+||||||.
T Consensus 240 E~~~~----~~c~-~~~g~h~~~d~~~vEIvDp~~~~------------------------~vp~Ge~GELvvT~L~~~~ 290 (445)
T TIGR03335 240 EGTMC----GECQ-AVAGLHVPEDLVHLDVYDPRHQR------------------------FLPDGECGRIVLTTLLKPG 290 (445)
T ss_pred hhhhe----EEec-CCCCccccCCceEEEEEcCCCCC------------------------CCcCCCceEEEEEecCCCC
Confidence 98543 3454 34579988888899999865321 256899999999986
Q ss_pred ----cceEeeeeCCEEEEe-ccc----CCCCEEEEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEee
Q 006862 416 ----AGLYRYRVGDVLRVA-GFK----NKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYA 486 (628)
Q Consensus 416 ----~GLyRYr~GDvv~v~-gf~----~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~ 486 (628)
..|+||||||++++. .-. ...|++..+||.+||+.+.|.++++.+|+++|........-. .+|.+..
T Consensus 291 ~r~~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~----~~~~~~~ 366 (445)
T TIGR03335 291 ERCGSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLT----GEYEAFL 366 (445)
T ss_pred ccCCceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCC----ccEEEEE
Confidence 459999999999963 222 223678778999999999999999999999997731100001 2687766
Q ss_pred cCCCCCceEEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccC--CCccCCeEEEEcCCccHHH
Q 006862 487 DTTTVPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVC--DKSIGPLEIKIVEPGTFDK 554 (628)
Q Consensus 487 d~~~~p~~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~--~~~l~pl~v~~V~~GtF~~ 554 (628)
+... .+.-.|-+++|... .. ....+.+.+.+.+.+...++..+.. .+ .-.++|.+|++|++++
T Consensus 367 ~~~~-~~~~~~~v~~e~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 431 (445)
T TIGR03335 367 YGEE-EGEITLRVSLECED--KD-NCSIHDIQENFTGTFLKYKPELIGSYDEG-IFQILVNFTGPGELEL 431 (445)
T ss_pred ecCC-CCCceEEEEEEecC--cc-cchHHHHHHHHHHHHhhhhhhhhhhhhcc-eEEEEEEEeCCCCccc
Confidence 5431 11112334444311 11 1234444555555532223221111 12 3347899999999975
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.89 E-value=5.7e-21 Score=209.20 Aligned_cols=386 Identities=17% Similarity=0.173 Sum_probs=213.3
Q ss_pred CHHHHHHHHHHHHHHh-cCCChHHHhh----CCC--CCCChhhHhhhCCCCChhhhHHHHHH-HHcCCCCCcccCCCcce
Q 006862 32 NPDEVQKKVLSEILLR-NAHVEYLQRN----GLN--GHTDRESFKKTMPVITYEDIQADINR-IANGDTSPILCSKPISE 103 (628)
Q Consensus 32 ~~~~~Q~~~L~~iL~~-n~~T~ygr~~----gf~--~i~~~edF~~~vPl~tYedl~pyIeR-i~~Ge~~~lL~~~pi~~ 103 (628)
+.++.|.+.|+++|+. .++++|||++ |+. .+.+.+||+ ++|++++++++..... +... ..+.+..
T Consensus 7 ~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~~~~~~------~~~~~~~ 79 (422)
T TIGR02155 7 ELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPFGLFAV------PREQVVR 79 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCCcccCC------ChHHcEE
Confidence 4678999999999997 5899999986 554 688999995 7999999999865421 2211 1233445
Q ss_pred eecccccCCCcccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEccCCccCCCCceeeecccccccccccc
Q 006862 104 FLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQFIPGLDKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSCHFK 183 (628)
Q Consensus 104 f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~~~~~~~~~~t~~Gi~~g~~s~~~~~s~~~~ 183 (628)
+..||||| |+||.+++|...+.......... . ..-++..|..+...++ .....+|..
T Consensus 80 ~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~~~---~--~~~g~~~~d~~~~~~~--~~~~~~~~~--------------- 136 (422)
T TIGR02155 80 IHASSGTT-GKPTVVGYTQNDIDTWSSVVARS---I--RAAGGRPGDLIHNAYG--YGLFTGGLG--------------- 136 (422)
T ss_pred EEECCCCC-CCCeEeccCHHHHHHHHHHHHHH---H--HHcCCCCCcEEEEccC--ccccchhHH---------------
Confidence 66899999 89999999998764432211110 0 1123333432211100 000000100
Q ss_pred CCCCCCCcccCCCcccccCCChhhHHHHHHhhhcccCccccEEeecchHHHHHHHHHHhhhHHHHHHHHHhccCCCCCCC
Q 006862 184 ERPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWPLVVKDIRTGTIDSQITD 263 (628)
Q Consensus 184 ~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~a~fa~~ll~~~~~Le~~w~~l~~dI~~Gtl~~~i~~ 263 (628)
..|..+.+|.. +-.+... .-+.+++.|++..+.--..
T Consensus 137 ------------------------~~~~~~~~g~~----~~~~~~~--------------~~~~~~~~i~~~~~t~l~~- 173 (422)
T TIGR02155 137 ------------------------AHYGAEKLGCT----VVPISGG--------------QTEKQVQLIQDFKPDIIMV- 173 (422)
T ss_pred ------------------------HHHHHHHcCcE----EEecCCC--------------CHHHHHHHHHHHCCCEEEE-
Confidence 01111111110 0000000 0123344454443221111
Q ss_pred hhhHHHHhhhcCCCHHHHHHHHHHhhhcCccccccccCCCCceeEEEEcCCc---cchHHHHHhhcCCCceecccccccc
Q 006862 264 PSVRDAVMKILKPNPKLADFIENECRKDCWQGIITRLWPNTKYVDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSE 340 (628)
Q Consensus 264 ~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSE 340 (628)
.|..+..|.+...+. |+-... +. ++.+++|+. ...++.+++.+ |++++ +.||+||
T Consensus 174 -------------~Ps~l~~L~~~~~~~---~~~~~~-~~---lr~i~~~ge~l~~~~~~~i~~~~-g~~v~-~~YG~tE 231 (422)
T TIGR02155 174 -------------TPSYMLNLLEELKRM---GIDPAQ-TS---LQVGIFGAEPWTNAMRKEIEARL-GMKAT-DIYGLSE 231 (422)
T ss_pred -------------cHHHHHHHHHHHHHc---CCCccc-Cc---eEEEEEeCCcCCHHHHHHHHHHh-CCceE-ecccchh
Confidence 222222222222221 111111 23 566665653 34566778888 68988 8999999
Q ss_pred cc-ccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCCccccccccceeeeccccCCCceEEEEEeecc---
Q 006862 341 CY-FGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTYA--- 416 (628)
Q Consensus 341 g~-~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~~--- 416 (628)
+. .++. ..|.....++++..+..+.|.+++++.. .|.+|+.+|||||+..
T Consensus 232 ~~~~~~~--~~~~~~~~g~~~~~~~~~~eivd~~~g~------------------------~v~~Ge~Gelvvt~~~~~~ 285 (422)
T TIGR02155 232 VIGPGVA--MECVETQDGLHIWEDHFYPEIIDPHTGE------------------------VLPDGEEGELVFTTLTKEA 285 (422)
T ss_pred hcCCcee--ecccccCCCceEecCeeEEEEECCCCCC------------------------CCCCCCeeEEEEecCCccc
Confidence 73 2221 2342234567777666788888754321 3568999999999732
Q ss_pred -ceEeeeeCCEEEEecc-cCCCCEE-EEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCc
Q 006862 417 -GLYRYRVGDVLRVAGF-KNKAPQF-NFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVPG 493 (628)
Q Consensus 417 -GLyRYr~GDvv~v~gf-~~~~P~~-~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~ 493 (628)
.+.||+|||++++..- -...|++ .|+||.+|++++.|+++++.+|+.++.... ++. ..|.+..+..+.+-
T Consensus 286 ~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~------~v~-~~~q~~~~~~~~~~ 358 (422)
T TIGR02155 286 LPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMD------ELS-PHYQLELTRNGHMD 358 (422)
T ss_pred cceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCc------CcC-CCEEEEEEcCCCcc
Confidence 3779999999998641 1233444 799999999999999999999999997632 211 14555444322223
Q ss_pred eEEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccCCCccCCeEEEEcCCccHHH
Q 006862 494 HYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKSIGPLEIKIVEPGTFDK 554 (628)
Q Consensus 494 ~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~l~pl~v~~V~~GtF~~ 554 (628)
..++++|...........+..+..++.|.+.+.. . .-..++|.++.+|++.+
T Consensus 359 ~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~--~~~~~~v~~~~~~~lp~ 410 (422)
T TIGR02155 359 ELTLKVELKPESYTLRLHEQASLLAGEIQHTIKQ-------E--VGVSMDVHLVEPGSLPR 410 (422)
T ss_pred EEEEEEEEecCcccccchHHHHHHHHHHHHHHHh-------c--cCcEEEEEEECCCCccC
Confidence 5666677642100001112222233344443322 1 12236799999998863
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.82 E-value=5.1e-18 Score=186.39 Aligned_cols=317 Identities=16% Similarity=0.228 Sum_probs=190.7
Q ss_pred CHHHHHHHHHHHHHHh-cCCChHHHhhCCCCCCChhhHhhhCCCCChhhhHHHHHHHHcCCC--CC------------cc
Q 006862 32 NPDEVQKKVLSEILLR-NAHVEYLQRNGLNGHTDRESFKKTMPVITYEDIQADINRIANGDT--SP------------IL 96 (628)
Q Consensus 32 ~~~~~Q~~~L~~iL~~-n~~T~ygr~~gf~~i~~~edF~~~vPl~tYedl~pyIeRi~~Ge~--~~------------lL 96 (628)
..++.|++.|+++|+. .++++|+|++. ++ ++ +++|+++++++..+.+++....- +. .+
T Consensus 23 ~l~~~Q~~rL~~ll~~a~~~sPfYr~~~--~~----~l-~~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~~~e~~r~f 95 (430)
T TIGR02304 23 ALENWQAKQLEKFLQFVLSHSPWFQRYH--TI----PF-NQWPMMDKALMMEHFDELNTAGLKKDEALDCAMRSEKTRDF 95 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhcc--CC----CH-HHCCCcCHHHHHHHHHHhhccCCChhhhhHHhhhhhhhccc
Confidence 4678999999999997 59999999972 33 46 47899999999999999984310 00 01
Q ss_pred cC--CCcceeecccccCCCcccccccCHHHHHHHHHHHHHHHHHHhhcCC-CCCCC-CeEEEEEccCCccCCCCceeeec
Q 006862 97 CS--KPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQFIP-GLDKG-KGMYFLFIKSEAKTPGGLVARPV 172 (628)
Q Consensus 97 ~~--~pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p-~~~~G-k~l~~~~~~~~~~t~~Gi~~g~~ 172 (628)
.+ +.+ ....||||| |+|-.|.++++...... +..+.+..| ++..| |...+..+..
T Consensus 96 ~~~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~~------a~~~~~~~~~g~~~g~r~a~~~~~~~------------- 154 (430)
T TIGR02304 96 KPCVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMWA------GGILAKVLPDGLFAKHRIAFFLRADN------------- 154 (430)
T ss_pred ccccCcE-EEEECCCCC-CCceEEEECHHHHHHHH------HHHHhhhCccccccCCcEEEEEccCh-------------
Confidence 10 233 456799999 89999999998653221 112223334 45444 4443321111
Q ss_pred cccccccccccCCCCCCCcccCCCcccccCCChhhHHHHHHhhhcccCccccEEeecchHHHHHHHHHHhhhHHHHHHHH
Q 006862 173 LTSYYKSCHFKERPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWPLVVKDI 252 (628)
Q Consensus 173 s~~~~~s~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~a~fa~~ll~~~~~Le~~w~~l~~dI 252 (628)
..+.+ +.++ + + . +..+++. +.+++.++.|
T Consensus 155 --~ly~~--~~~~---------------------------~---------~-~---------~~~~~l~-~~~~~~l~~L 183 (430)
T TIGR02304 155 --NLYQS--VNNR---------------------------W---------I-S---------LDFFDLL-APFQAHIKRL 183 (430)
T ss_pred --hHHHH--HHhc---------------------------c---------c-e---------eeecCCC-cCHHHHHHHH
Confidence 00000 0000 0 0 0 0112222 4566777777
Q ss_pred HhccCCCCCCChhhHHHHhhhcCCCHHHHHHHHHHhhhcCccccccccCCCCceeEEEEcCC-c--cchHHHHHhhcCCC
Q 006862 253 RTGTIDSQITDPSVRDAVMKILKPNPKLADFIENECRKDCWQGIITRLWPNTKYVDVIVTGT-M--SQYIPILDYYSNGL 329 (628)
Q Consensus 253 ~~Gtl~~~i~~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~-~--~~y~~~l~~~~~g~ 329 (628)
.+-. +.+ +.++++....+|+++++ + |+ ++-| ..+++++ . ...++.|++.| |+
T Consensus 184 ~~~~--P~~--------L~g~pS~l~~LA~~~~~----~---~l--~~~~-----k~ii~~~E~l~~~~r~~Ie~~f-g~ 238 (430)
T TIGR02304 184 NQRK--PSI--------IVAPPSVLRALALEVME----G---EL--TIKP-----KKVISVAEVLEPQDRELIRNVF-KN 238 (430)
T ss_pred HHhC--CCE--------EEEcHHHHHHHHHHHHh----c---CC--CCCc-----eEEEEccCCCCHHHHHHHHHHh-CC
Confidence 7554 221 22222223445554332 2 22 2223 3444444 2 34467789999 79
Q ss_pred ceeccccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCCccccccccceeeeccccCCCceEE
Q 006862 330 PLVCTMYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEKERQELVDLVDVKLGQEYE 409 (628)
Q Consensus 330 p~~~~~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~Ye 409 (628)
+++ +.||+|||++| ..|. +.+||+.++..|+|+..+++. | .++
T Consensus 239 ~V~-~~YG~tEg~la----~eC~--~g~lHl~ed~~~vE~~ivD~~-----------------------------~-~~~ 281 (430)
T TIGR02304 239 TVH-QIYQATEGFLA----STCR--CGTLHLNEDLVHIEKQYLDEH-----------------------------K-RFV 281 (430)
T ss_pred Cee-EccCCchhheE----EecC--CCCEEEccccEEEEeeEECCC-----------------------------C-ceE
Confidence 998 89999998776 4663 457999999999995222211 1 134
Q ss_pred EEEeec----cceEeeeeCCEEEEeccc----CCCCEE-EEeeecCceEec---cceec--cHHHHHHHHHHHHhhcCCC
Q 006862 410 LVVTTY----AGLYRYRVGDVLRVAGFK----NKAPQF-NFICRKNVVLSI---DSDKT--DEVELQNAVKNAVNHLVPF 475 (628)
Q Consensus 410 LVvTt~----~GLyRYr~GDvv~v~gf~----~~~P~~-~f~gR~~~~l~i---~gek~--~e~~v~~av~~a~~~l~~~ 475 (628)
.|||++ ..|+||+|||++++..-. +..|+| ++.||.+|++.+ +|.++ ++..+..+|.... .
T Consensus 282 ~ViT~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~-----~ 356 (430)
T TIGR02304 282 PIITDFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTL-----P 356 (430)
T ss_pred EEEecCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcC-----C
Confidence 599985 359999999999876432 223577 599999999865 45555 8888877765432 2
Q ss_pred CceEEeEEEeecCCCCCceEEEEE
Q 006862 476 DAAVSEYTSYADTTTVPGHYVLYW 499 (628)
Q Consensus 476 g~~l~eft~~~d~~~~p~~Yvl~~ 499 (628)
+ +.+|.+... .+++.+|.+
T Consensus 357 ~--i~~yQi~Q~---~~~~l~v~~ 375 (430)
T TIGR02304 357 L--IVEYRVLQT---GSAQLELIA 375 (430)
T ss_pred C--CceEEEEEc---cCCeEEEEE
Confidence 2 468887654 356766544
No 9
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.28 E-value=2.3e-09 Score=123.75 Aligned_cols=163 Identities=15% Similarity=0.156 Sum_probs=93.7
Q ss_pred ccCCCceEEEEEeec-----cceE----------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHH
Q 006862 401 DVKLGQEYELVVTTY-----AGLY----------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEV 459 (628)
Q Consensus 401 eve~G~~YeLVvTt~-----~GLy----------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~ 459 (628)
.+..|+.+||+|+.. .|+| .|+|||++++.. ...+.|+||.++++++.|+++...
T Consensus 444 ~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~dd~ik~~G~~v~p~ 519 (637)
T PRK00174 444 PLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDE----DGYYWITGRVDDVLNVSGHRLGTA 519 (637)
T ss_pred CCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcC----CCcEEEEEecccEEEeCCEEECHH
Confidence 356799999999851 1221 299999999873 457999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCce-EEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccCCCc
Q 006862 460 ELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVPGH-YVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKS 538 (628)
Q Consensus 460 ~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~~-Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~ 538 (628)
+|+++|.+. .+ |.+..++.......+. -+.|+.+.. +...+.+..+++.+.+.+.|.. .
T Consensus 520 eIE~~l~~~------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~--~~~~~~~~~~~l~~~l~~~l~~----------~ 579 (637)
T PRK00174 520 EIESALVAH------PK--VAEAAVVGRPDDIKGQGIYAFVTLKG--GEEPSDELRKELRNWVRKEIGP----------I 579 (637)
T ss_pred HHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEECC--CCCCCHHHHHHHHHHHHhhcCC----------c
Confidence 999999753 22 3344443321112222 235555532 1112222233444444444432 1
Q ss_pred cCCeEEEEc------CCccHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhhccc
Q 006862 539 IGPLEIKIV------EPGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVV 589 (628)
Q Consensus 539 l~pl~v~~V------~~GtF~~l~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~v~ 589 (628)
..|-.|.+| ..|-..+-.=....+|.. +.+-+.-+.|++.++.+.+.+-
T Consensus 580 ~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 634 (637)
T PRK00174 580 AKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLADPSVVEKLIEARQ 634 (637)
T ss_pred cCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCcccccCHHHHHHHHHHHh
Confidence 234455554 234333321111223332 4555666778888888776544
No 10
>PRK07529 AMP-binding domain protein; Validated
Probab=99.28 E-value=7e-10 Score=128.13 Aligned_cols=134 Identities=15% Similarity=0.222 Sum_probs=88.4
Q ss_pred eeEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 306 YVDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 306 ~i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
.++.+++|+. ...++.+++.+ |++++ +.||+||+...+...+.. .+...+.. +|+. -+.++..++.+
T Consensus 334 slr~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~-~p~~-~v~i~~~d~~g--- 406 (632)
T PRK07529 334 SLRYALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLR-LPYQ-RVRVVILDDAG--- 406 (632)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCcccc-cCCc-eEEEEEcCCCC---
Confidence 3677777774 23345566667 79998 999999986543322211 01112222 2222 24444433211
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEee
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~g 443 (628)
. ...++..|+.+||+|++ +.|++ -|+|||+.++.. ...+.|+|
T Consensus 407 ---------------~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~G 465 (632)
T PRK07529 407 ---------------R--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTG 465 (632)
T ss_pred ---------------c--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEe
Confidence 0 01246789999999976 34533 389999999973 45899999
Q ss_pred ecCceEeccceeccHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|.++++++.|+++++.+|++++.+
T Consensus 466 R~~d~i~~~G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 466 RAKDLIIRGGHNIDPAAIEEALLR 489 (632)
T ss_pred cccCEEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999999976
No 11
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.26 E-value=9.8e-12 Score=131.21 Aligned_cols=133 Identities=21% Similarity=0.288 Sum_probs=94.0
Q ss_pred CceeEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 304 TKYVDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 304 l~~i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
|+.++.+--||+ +.-..+++..+ ||.+. ..+|..||.+.+. ...+|.+. +..+.+ -|....++
T Consensus 304 LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQ-QVFGMAEGLvnyT--RLDDp~E~---i~~TQG----rPlsP~DE--- 369 (542)
T COG1021 304 LSSLRLLQVGGARLSATLARRVPAVL-GCQLQ-QVFGMAEGLVNYT--RLDDPPEI---IIHTQG----RPLSPDDE--- 369 (542)
T ss_pred chheeEEeecCcccCHHHHhhchhhh-CchHH-HHhhhhhhhhccc--ccCCchHh---eeecCC----CcCCCcce---
Confidence 444566655764 33356666777 78888 8899999987542 33333221 111223 23332211
Q ss_pred cCCCCccccccccceeee--ccccCCCceEEEEEe---eccceEe--------------eeeCCEEEEecccCCCCEEEE
Q 006862 381 SISMPKSLNEKERQELVD--LVDVKLGQEYELVVT---TYAGLYR--------------YRVGDVLRVAGFKNKAPQFNF 441 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~--l~eve~G~~YeLVvT---t~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f 441 (628)
..+++ ..+|.+|+.++|..- |+.|+|| ||+||+|+.+ ....+.+
T Consensus 370 -------------vrvvD~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~----~dGyl~V 432 (542)
T COG1021 370 -------------VRVVDADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRD----PDGYLVV 432 (542)
T ss_pred -------------eEEecCCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEec----CCceEEE
Confidence 23333 346889999999884 8999998 9999999998 3568999
Q ss_pred eeecCceEeccceeccHHHHHHHHHH
Q 006862 442 ICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 442 ~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.||.+|.||..||||-.+||++.+-.
T Consensus 433 ~GR~KDQINRgGEKIAAeEvEn~LL~ 458 (542)
T COG1021 433 EGRVKDQINRGGEKIAAEEVENLLLR 458 (542)
T ss_pred EeeehhhhccccchhhHHHHHHHHhh
Confidence 99999999999999999999998865
No 12
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.25 E-value=5.4e-09 Score=120.26 Aligned_cols=160 Identities=16% Similarity=0.179 Sum_probs=91.7
Q ss_pred cC-CCceEEEEEeec-----cceE----------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHH
Q 006862 402 VK-LGQEYELVVTTY-----AGLY----------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEV 459 (628)
Q Consensus 402 ve-~G~~YeLVvTt~-----~GLy----------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~ 459 (628)
+. +|+.+||+|+.. .|+| -|+|||++++.. .-.+.|+||.+|++++.|+++...
T Consensus 436 ~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i~GR~dd~i~~~G~ri~p~ 511 (625)
T TIGR02188 436 VEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK----DGYIWITGRVDDVINVSGHRLGTA 511 (625)
T ss_pred CCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC----CCcEEEEecccCEEEeCCEEECHH
Confidence 55 789999999862 2333 199999999873 347899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceE-EEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccCCCc
Q 006862 460 ELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVPGHY-VLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKS 538 (628)
Q Consensus 460 ~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~~Y-vl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~ 538 (628)
+|+++|.... + |.+..++.......+.. +.|+.+.. ....+.+..+++...+.+.|.. .
T Consensus 512 eIE~~l~~~p------~--V~e~~vvg~~~~~~g~~~~a~vv~~~--~~~~~~~~~~~l~~~~~~~l~~----------~ 571 (625)
T TIGR02188 512 EIESALVSHP------A--VAEAAVVGIPDDIKGQAIYAFVTLKD--GYEPDDELRKELRKHVRKEIGP----------I 571 (625)
T ss_pred HHHHHHHhCC------C--cceEEEEeeEcCCCCeEEEEEEEeCC--CCCCCHHHHHHHHHHHHhhcCC----------C
Confidence 9999997632 2 34555443211122333 35666542 1222222233344444444432 1
Q ss_pred cCCeEEEEc------CCccHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhh
Q 006862 539 IGPLEIKIV------EPGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNS 586 (628)
Q Consensus 539 l~pl~v~~V------~~GtF~~l~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~ 586 (628)
..|-.|.+| ..|-..+-.=..+..|.. .+++.+--+.|++.++.+.+
T Consensus 572 ~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 572 AKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE-EILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred ccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-CCCCCcccccCHHHHHHHHh
Confidence 233334443 234333322111223421 23555666778888887764
No 13
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.24 E-value=2.3e-09 Score=119.25 Aligned_cols=130 Identities=11% Similarity=0.208 Sum_probs=85.4
Q ss_pred eEEEEcCCccc---hHHHHHhhcCCCceeccccccccccccccCC--CCCCCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTMSQ---YIPILDYYSNGLPLVCTMYASSECYFGVNLN--PLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~~~---y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~--~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++.+++|+... ....++..+ +++++ +.||+||+.+..... ..+.+...+. ..++ ..+..+++++.
T Consensus 271 lr~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~~-~~v~i~d~~~~------ 340 (504)
T PRK07514 271 MRLFISGSAPLLAETHREFQERT-GHAIL-ERYGMTETNMNTSNPYDGERRAGTVGF-PLPG-VSLRVTDPETG------ 340 (504)
T ss_pred eeeEEecCCCCCHHHHHHHHHHh-CCcce-eecccccccccccCCccccccCccccc-CCCC-cEEEEEECCCC------
Confidence 67777777432 234445555 67888 899999985432111 0111111111 1222 33444443221
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEeee
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
..+..|+.+||+|++ ..|+|+ |+|||++++.. .-.+.|+||
T Consensus 341 ------------------~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR 398 (504)
T PRK07514 341 ------------------AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGR 398 (504)
T ss_pred ------------------CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEecc
Confidence 135678899999986 456664 99999999874 347899999
Q ss_pred cCceEeccceeccHHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.++++++.|++++..+|++++.+.
T Consensus 399 ~~~~i~~~G~~i~~~~IE~~l~~~ 422 (504)
T PRK07514 399 GKDLIISGGYNVYPKEVEGEIDEL 422 (504)
T ss_pred ccceEEeCCeEECHHHHHHHHHhC
Confidence 999999999999999999999763
No 14
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.22 E-value=2.6e-09 Score=118.55 Aligned_cols=130 Identities=19% Similarity=0.279 Sum_probs=84.1
Q ss_pred eeEEEEcCCccchHHHHHhhc-CCCceeccccccccccc--cccCCCC---CCCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 306 YVDVIVTGTMSQYIPILDYYS-NGLPLVCTMYASSECYF--GVNLNPL---CKPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 306 ~i~~~~~G~~~~y~~~l~~~~-~g~p~~~~~Y~aSEg~~--gi~~~~~---~~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
.++.+++||...-...++.+. .|++++ +.||+||+.. +++..+. ..+...+. ..|+ ..+++++.+.
T Consensus 253 ~l~~~~~gG~~~~~~~~~~~~~~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~~----- 324 (488)
T PRK09088 253 HLTALFTGGAPHAAEDILGWLDDGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGI-PTPT-VQTRVVDDQG----- 324 (488)
T ss_pred cceEEEecCCCCCHHHHHHHHHhCCcee-eeecccccccccccCCCcccccccCCcccc-CCCC-cEEEEECCCC-----
Confidence 367777787543333444322 268998 8999999843 2211110 01111111 1222 2344443221
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEe
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~ 442 (628)
.++..|+.+||+|++ ..|+++ |+|||++++.. ...+.|+
T Consensus 325 --------------------~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~ 380 (488)
T PRK09088 325 --------------------NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVV 380 (488)
T ss_pred --------------------CCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEe
Confidence 135678899999986 345553 99999999973 3479999
Q ss_pred eecCceEeccceeccHHHHHHHHHH
Q 006862 443 CRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 443 gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
||.++++++.|++++..+|++++..
T Consensus 381 GR~~d~i~~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 381 DRKKDMFISGGENVYPAEIEAVLAD 405 (488)
T ss_pred ccccceEEeCCEEECHHHHHHHHHh
Confidence 9999999999999999999999965
No 15
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.22 E-value=9.6e-10 Score=124.46 Aligned_cols=131 Identities=17% Similarity=0.199 Sum_probs=85.8
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCCCC---CCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKP---SEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p---~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++||. ....+.+++.+++++++ +.||+||+...+...+...+ ...+.. .|+.. +..++.+.
T Consensus 301 lr~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p-~~g~~-v~i~d~~~------ 371 (539)
T PRK06334 301 LRFVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGMP-IRGMD-VLIVSEET------ 371 (539)
T ss_pred ccEEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCcee-cCCCE-EEEEcCCC------
Confidence 566777774 33455666777788888 99999998533222111100 112221 12221 11121110
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceE---------------eeeeCCEEEEecccCCCCEEEEe
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY---------------RYRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy---------------RYr~GDvv~v~gf~~~~P~~~f~ 442 (628)
...|..|+.+||+|.. ..|+| -|+|||++++.. ...+.|+
T Consensus 372 ------------------~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~----~G~l~~~ 429 (539)
T PRK06334 372 ------------------KVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR----HGELFLK 429 (539)
T ss_pred ------------------CccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC----CCeEEEE
Confidence 1246789999999965 33443 399999999873 4578999
Q ss_pred eecCceEeccceeccHHHHHHHHHHH
Q 006862 443 CRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 443 gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
||.++++++.|++++..||+.++...
T Consensus 430 GR~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 430 GRLSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred eccCCeEEECCEEECHHHHHHHHHHc
Confidence 99999999999999999999999764
No 16
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.21 E-value=1.2e-09 Score=123.94 Aligned_cols=130 Identities=19% Similarity=0.285 Sum_probs=85.6
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCCC---CCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK---PSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~---p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++|+.. .....++..+ +++++ ..||+||+...+...+... +...+. ..|+ ..++.++.+...
T Consensus 338 lr~i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~~~---- 409 (573)
T PRK05605 338 VRNAFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGV-PFPD-TEVRIVDPEDPD---- 409 (573)
T ss_pred ccEEEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccCCcCCcccc-CCCC-CEEEEEcCCCCC----
Confidence 5666767643 3334455555 68888 8999999853322222111 111221 2233 244555543211
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
..+..|+.+||+|++ ..|+| .|+|||++++.. ...+.|+||
T Consensus 410 -------------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~gR 466 (573)
T PRK05605 410 -------------------ETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE----DGFIRIVDR 466 (573)
T ss_pred -------------------ccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC----CCcEEEEec
Confidence 135678899999986 35555 499999999873 347899999
Q ss_pred cCceEeccceeccHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.+++++++|++++..+|++++..
T Consensus 467 ~dd~i~~~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 467 IKELIITGGFNVYPAEVEEVLRE 489 (573)
T ss_pred cccceeeCCEEECHHHHHHHHHh
Confidence 99999999999999999999965
No 17
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.21 E-value=3.1e-09 Score=123.30 Aligned_cols=231 Identities=13% Similarity=0.024 Sum_probs=123.0
Q ss_pred eeEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCC---CCCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 306 YVDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPL---CKPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 306 ~i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~---~~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
.++.+.+||.. ...+.+++.+ |++++ +.||.||+...+..... .+....+. ..|+ .-.+.++.+
T Consensus 381 ~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~-p~~g-~~~~i~d~~------ 450 (647)
T PTZ00237 381 NLKEIWCGGEVIEESIPEYIENKL-KIKSS-RGYGQTEIGITYLYCYGHINIPYNATGV-PSIF-IKPSILSED------ 450 (647)
T ss_pred hheEEEecCccCCHHHHHHHHHhc-CCCEE-eeechHHhChhhhccCCCCCCCCCCCcc-CcCC-ceEEEECCC------
Confidence 35667767642 2234555666 68888 99999998543211110 00011111 1111 112222211
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee------ccceE---------------eeeeCCEEEEecccCCCCE
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT------YAGLY---------------RYRVGDVLRVAGFKNKAPQ 438 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt------~~GLy---------------RYr~GDvv~v~gf~~~~P~ 438 (628)
..+|..|+.+||+|+. ..|+| .|+|||+.++.. ...
T Consensus 451 -------------------g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~----dG~ 507 (647)
T PTZ00237 451 -------------------GKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDE----NGY 507 (647)
T ss_pred -------------------CCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECC----CCe
Confidence 1246679999999974 34565 299999999873 457
Q ss_pred EEEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCc-eEEEEEEEeeC-CCCCCCcchHHH
Q 006862 439 FNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVPG-HYVLYWELSLN-GTTPIPPSVFED 516 (628)
Q Consensus 439 ~~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~-~Yvl~~El~~~-~~~~~~~~~l~~ 516 (628)
+.|+||.+|+|++.|++++..+|+++|.... + |.+-.++.-....-+ .-+.|+.+... .....+ .++
T Consensus 508 l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p------~--V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~---~~~ 576 (647)
T PTZ00237 508 YTIVSRSDDQIKISGNKVQLNTIETSILKHP------L--VLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSID---LNK 576 (647)
T ss_pred EEEEeccCCEEEECCEEeCHHHHHHHHHhCC------C--ceeeEEEeeEcCCCCCEEEEEEEeccCccccCCC---HHH
Confidence 9999999999999999999999999997632 1 334443321111122 22345544321 001111 222
Q ss_pred HHHHHHHHhChhhHhcccCCCccCCeEEEEcCC---ccHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhh
Q 006862 517 CCLTIEESLNSVYRQGRVCDKSIGPLEIKIVEP---GTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNS 586 (628)
Q Consensus 517 ~~~~ld~~Ln~~Y~~~R~~~~~l~pl~v~~V~~---GtF~~l~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~ 586 (628)
+...|.+.++. + -.....|-+|.+|+. -.-.+.++..+.+=....++..|.-+.|++.++.|.+
T Consensus 577 l~~~i~~~~~~-----~-l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (647)
T PTZ00237 577 LKNEINNIITQ-----D-IESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDSNYQLPDNVNDSEIFYKIKE 643 (647)
T ss_pred HHHHHHHHHHh-----h-cCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCCCCCCCccccCHHHHHHHHH
Confidence 22222222211 0 011223434555432 1112222332321122347888999999999998865
No 18
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.18 E-value=2.6e-09 Score=120.70 Aligned_cols=128 Identities=13% Similarity=0.140 Sum_probs=83.9
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCCC----CCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK----PSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~----p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
++.+++|+. ...+..+++.+ +++++ +.||+||+.......+... ....+.. .|+. -++.++.+
T Consensus 314 l~~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~-~~~~-~v~i~d~~------ 383 (547)
T PRK13295 314 LRTFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGCP-LPGV-EVRVVDAD------ 383 (547)
T ss_pred ceEEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCccccc-cCCc-EEEEECCC------
Confidence 566666663 33345566667 78999 9999999843221111100 0011111 1221 23333221
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE-e-----------eeeCCEEEEecccCCCCEEEEeee
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-R-----------YRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-R-----------Yr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
..++..|+.+||+|+. +.|+| | |+|||++++.. ...+.|+||
T Consensus 384 -------------------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~l~~~gR 440 (547)
T PRK13295 384 -------------------GAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGYIRISGR 440 (547)
T ss_pred -------------------CCCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----CceEEEEec
Confidence 1245678899999986 45555 2 99999999973 457999999
Q ss_pred cCceEeccceeccHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.++++++.|+|+...+|+++|.+
T Consensus 441 ~~~~i~~~G~~v~p~~IE~~l~~ 463 (547)
T PRK13295 441 SKDVIIRGGENIPVVEIEALLYR 463 (547)
T ss_pred cCCeEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999976
No 19
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.17 E-value=7.7e-09 Score=116.66 Aligned_cols=131 Identities=17% Similarity=0.226 Sum_probs=85.2
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCC-CC--CCCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLN-PL--CKPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~-~~--~~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.++.|+.. ...+.++..+ +++++ +.||+||+...+... .. ..+...++.+ +.. .++....++.
T Consensus 314 l~~i~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~-~~~-~~~v~~~d~~----- 384 (541)
T TIGR03205 314 LATIGSGGAPLPVEVANFFERKT-GLKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML-PGI-ELDVVSLDDP----- 384 (541)
T ss_pred cceEEEccccCCHHHHHHHHHHh-CCCee-cccccccCCcccccCCCCCCCCCCCcceec-cCc-eeEEEecCCC-----
Confidence 5677777642 2234455556 68888 999999984322111 10 0112233432 222 2333332221
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
. .++..|+.+||+|++ ..|+| +|+|||+.++.. ...+.|+||
T Consensus 385 -------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR 442 (541)
T TIGR03205 385 -------------T-----KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDR 442 (541)
T ss_pred -------------C-----ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEcc
Confidence 1 135678899999986 34554 589999999863 347899999
Q ss_pred cCceEeccceeccHHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.++++++.|+++++.+|++++.+.
T Consensus 443 ~~~~i~~~G~~i~~~eIE~~l~~~ 466 (541)
T TIGR03205 443 KKDMIISGGFNVYPQMIEQAIYEH 466 (541)
T ss_pred ccCeEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999999763
No 20
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.17 E-value=7.2e-09 Score=117.84 Aligned_cols=129 Identities=15% Similarity=0.140 Sum_probs=84.0
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCC---CCCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPL---CKPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~---~~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++||.. .....++..+ |++++ +.||+||+...+..... ..+...+. ..|+ ..++.++.+.
T Consensus 325 lr~~~~gG~~l~~~~~~~~~~~~-g~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d~~~------ 394 (570)
T PRK04319 325 LRHILSVGEPLNPEVVRWGMKVF-GLPIH-DNWWMTETGGIMIANYPAMDIKPGSMGK-PLPG-IEAAIVDDQG------ 394 (570)
T ss_pred ceEEEEcccCCCHHHHHHHHHHh-CCCeE-eceeecccCCEEEecCCCCCCCCCcCcC-CCCC-CEEEEECCCC------
Confidence 5666767642 2334455656 68888 99999998432111111 11122222 1222 2344444321
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee-----ccceE-------------eeeeCCEEEEecccCCCCEEEEe
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT-----YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt-----~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~ 442 (628)
.++.+|+.+||+|+. +.|+| -|+|||++++.. .-.+.|+
T Consensus 395 -------------------~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~g~l~~~ 451 (570)
T PRK04319 395 -------------------NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----DGYFWFQ 451 (570)
T ss_pred -------------------CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----CeeEEEE
Confidence 135789999999974 23554 389999999973 4478999
Q ss_pred eecCceEeccceeccHHHHHHHHHHH
Q 006862 443 CRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 443 gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
||.++++++.|+++++.+|++++.+.
T Consensus 452 GR~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 452 GRVDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred ecCCCEEEECCEEECHHHHHHHHhhC
Confidence 99999999999999999999999764
No 21
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.16 E-value=4.3e-09 Score=119.53 Aligned_cols=132 Identities=12% Similarity=0.097 Sum_probs=85.4
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceecccccccccccccc--CCCCCCCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVN--LNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~--~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++.+++|+. ...++.+.+.+++++++ +.||+||+..... ...................-.+.+++++.
T Consensus 321 lr~~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g------ 393 (560)
T PLN02574 321 LKQVSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTG------ 393 (560)
T ss_pred ceEEEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCC------
Confidence 556666664 23345556667788888 8999999853211 11111001111211112233444443221
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEeee
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
..+..|+.+||+|+. ..|+| -|+|||+.++.. ...+.|+||
T Consensus 394 ------------------~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR 451 (560)
T PLN02574 394 ------------------CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDR 451 (560)
T ss_pred ------------------cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEec
Confidence 246679999999986 34444 289999999973 457999999
Q ss_pred cCceEeccceeccHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.++++++.|++++..+|+.++..
T Consensus 452 ~~d~i~~~G~~v~~~eiE~~l~~ 474 (560)
T PLN02574 452 LKEIIKYKGFQIAPADLEAVLIS 474 (560)
T ss_pred chhheEECCEEECHHHHHHHHHh
Confidence 99999999999999999999975
No 22
>PRK09274 peptide synthase; Provisional
Probab=99.15 E-value=6.3e-09 Score=117.56 Aligned_cols=64 Identities=16% Similarity=0.129 Sum_probs=53.4
Q ss_pred ccCCCceEEEEEee---ccc------------------eEeeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHH
Q 006862 401 DVKLGQEYELVVTT---YAG------------------LYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEV 459 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~G------------------LyRYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~ 459 (628)
++..|+.+||+|.. ..| -.+|+|||++++.. ...+.|+||.++++++.|++++..
T Consensus 381 ~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~----dG~l~~~GR~~d~i~~~G~~v~p~ 456 (552)
T PRK09274 381 RLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDA----QGRLWFCGRKAHRVETAGGTLYTI 456 (552)
T ss_pred cCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEcc----CCcEEEEeccCCeEEECCEEECcH
Confidence 56789999999954 122 23799999999873 457999999999999999999999
Q ss_pred HHHHHHHHH
Q 006862 460 ELQNAVKNA 468 (628)
Q Consensus 460 ~v~~av~~a 468 (628)
+|++++...
T Consensus 457 eIE~~l~~~ 465 (552)
T PRK09274 457 PCERIFNTH 465 (552)
T ss_pred HHHHHHHhC
Confidence 999999763
No 23
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.15 E-value=4.9e-09 Score=118.44 Aligned_cols=129 Identities=16% Similarity=0.115 Sum_probs=83.6
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++||. ...++.+++.+ +++++ +.||+||+.......+.. .+...+. ..++. -++.++.+.
T Consensus 325 lr~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-~~~~~-~~~i~d~~~------ 394 (549)
T PRK07788 325 LKIIFVSGSALSPELATRALEAF-GPVLY-NLYGSTEVAFATIATPEDLAEAPGTVGR-PPKGV-TVKILDENG------ 394 (549)
T ss_pred eeEEEEeCCCCCHHHHHHHHHHh-Cccce-eccCcchhchhhccChhhhhhcCCCccc-CCCCc-EEEEECCCc------
Confidence 667776764 23345556666 57787 999999974322111110 0111111 12222 234443221
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEeec---cceE----------eeeeCCEEEEecccCCCCEEEEeeecCc
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY---AGLY----------RYRVGDVLRVAGFKNKAPQFNFICRKNV 447 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~---~GLy----------RYr~GDvv~v~gf~~~~P~~~f~gR~~~ 447 (628)
.++..|+.+||+|++. .|++ -|+|||++++.. ...+.|+||.++
T Consensus 395 -------------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd 451 (549)
T PRK07788 395 -------------------NEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDD 451 (549)
T ss_pred -------------------CCCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcc
Confidence 1356799999999873 3443 279999998873 457999999999
Q ss_pred eEeccceeccHHHHHHHHHHH
Q 006862 448 VLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 448 ~l~i~gek~~e~~v~~av~~a 468 (628)
++++.|++++..+|++++.+.
T Consensus 452 ~i~~~G~~v~p~eIE~~l~~~ 472 (549)
T PRK07788 452 MIVSGGENVFPAEVEDLLAGH 472 (549)
T ss_pred eEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999763
No 24
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.15 E-value=6.2e-09 Score=121.69 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=86.1
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCC--CCCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPL--CKPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~--~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++++++||.. ..++.+.+.+++++++ +.||+||+...+..... ..+...+. ..++. .++.++.+.
T Consensus 262 lr~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG~-p~~~~-~v~i~d~~g------- 331 (705)
T PRK06060 262 LRCVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLGTLGR-VLPPY-EIRVVAPDG------- 331 (705)
T ss_pred eeEEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcCcccc-cCCCc-EEEEECCCC-------
Confidence 6777777642 3345666778789998 99999998432211110 01111122 12232 233333221
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceEe-----------eeeCCEEEEecccCCCCEEEEeeecCc
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR-----------YRVGDVLRVAGFKNKAPQFNFICRKNV 447 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR-----------Yr~GDvv~v~gf~~~~P~~~f~gR~~~ 447 (628)
..+..|+.+||+|+. ..|+|. |+|||++++.. ...+.|+||.++
T Consensus 332 ------------------~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~dd 389 (705)
T PRK06060 332 ------------------TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRADD 389 (705)
T ss_pred ------------------CCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccCc
Confidence 135679999999975 345553 99999999873 347999999999
Q ss_pred eEeccceeccHHHHHHHHHHH
Q 006862 448 VLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 448 ~l~i~gek~~e~~v~~av~~a 468 (628)
+++++|+++...+|+.+|.+.
T Consensus 390 ~ik~~G~~v~~~eIE~~l~~~ 410 (705)
T PRK06060 390 TEVIGGVNVDPREVERLIIED 410 (705)
T ss_pred eEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999763
No 25
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.15 E-value=6.1e-09 Score=117.86 Aligned_cols=129 Identities=17% Similarity=0.260 Sum_probs=84.8
Q ss_pred eEEEEcCCcc-chHHHHHhhcCCCceeccccccccccccccCC-CCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCC
Q 006862 307 VDVIVTGTMS-QYIPILDYYSNGLPLVCTMYASSECYFGVNLN-PLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISM 384 (628)
Q Consensus 307 i~~~~~G~~~-~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~-~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~ 384 (628)
+..+.+|+.. ..++.+++.+ +++++ +.||+||+...+... +...+...+. ..++ .-+++++.+.
T Consensus 296 l~~~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~~---------- 361 (542)
T PRK06155 296 VRVALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPGSMGR-LAPG-FEARVVDEHD---------- 361 (542)
T ss_pred eEEEEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCCCcCc-cCCC-ceEEEECCCC----------
Confidence 4455556643 2345566666 78988 999999985432211 1111111221 1222 2344443221
Q ss_pred CccccccccceeeeccccCCCceEEEEEeec------cceE-------------eeeeCCEEEEecccCCCCEEEEeeec
Q 006862 385 PKSLNEKERQELVDLVDVKLGQEYELVVTTY------AGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRK 445 (628)
Q Consensus 385 ~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~------~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~ 445 (628)
.++..|+.+||+|++. .|+| +|+|||++++.. ...+.|+||.
T Consensus 362 ---------------~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~ 422 (542)
T PRK06155 362 ---------------QELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRI 422 (542)
T ss_pred ---------------CCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecC
Confidence 1466788999999864 3443 699999999973 4579999999
Q ss_pred CceEeccceeccHHHHHHHHHHH
Q 006862 446 NVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 446 ~~~l~i~gek~~e~~v~~av~~a 468 (628)
+|++++.|++++..+|+++|.+.
T Consensus 423 ~d~i~~~G~~v~p~eIE~~l~~~ 445 (542)
T PRK06155 423 KDAIRRRGENISSFEVEQVLLSH 445 (542)
T ss_pred CCEEEeCCEEECHHHHHHHHHhC
Confidence 99999999999999999999763
No 26
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.14 E-value=2.3e-08 Score=111.10 Aligned_cols=63 Identities=16% Similarity=0.332 Sum_probs=52.8
Q ss_pred ccCCCceEEEEEee---ccceE-----------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY-----------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVE 460 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy-----------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~ 460 (628)
.+.+|+.+||+|++ ..|+| -|+|||+.+++. . .+.|+||.+|+++++|+|++..+
T Consensus 336 ~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~----~-~l~i~GR~~d~i~~~G~~v~~~~ 410 (502)
T TIGR01734 336 PLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD----G-QLFYQGRLDFQIKLHGYRIELED 410 (502)
T ss_pred CCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC----C-EEEEeccccCeEEECcEEeCHHH
Confidence 35678899999976 23333 389999999983 3 99999999999999999999999
Q ss_pred HHHHHHHH
Q 006862 461 LQNAVKNA 468 (628)
Q Consensus 461 v~~av~~a 468 (628)
|++++...
T Consensus 411 IE~~l~~~ 418 (502)
T TIGR01734 411 IEFNLRQS 418 (502)
T ss_pred HHHHHHcC
Confidence 99999763
No 27
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.13 E-value=1.3e-08 Score=114.85 Aligned_cols=129 Identities=16% Similarity=0.198 Sum_probs=87.2
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccc-cccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYF-GVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~-gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
++++.+|+. ...++.+.+.+++++++ +.||+||+.. +....... .+...+.. .|+ ...+.++.+.
T Consensus 292 lr~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~~----- 363 (542)
T PRK07786 292 LRVLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGKV-IPT-VAARVVDENM----- 363 (542)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCcccc-CCC-ceEEEECCCC-----
Confidence 677776764 33466777888889998 9999999842 21111000 01112221 122 3444444321
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe-------------eeeCCEEEEecccCCCCEEEEee
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~g 443 (628)
.++..|+.+||++.. ..|+|+ |+|||++++.. ...+.|+|
T Consensus 364 --------------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~G 419 (542)
T PRK07786 364 --------------------NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVD 419 (542)
T ss_pred --------------------CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEe
Confidence 135678899999975 455653 99999999873 34799999
Q ss_pred ecCceEeccceeccHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|.++++++.|++++..+|+++|.+
T Consensus 420 R~~d~i~~~G~~v~~~eiE~~l~~ 443 (542)
T PRK07786 420 RKKDMIISGGENIYCAEVENVLAS 443 (542)
T ss_pred cccceEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999999965
No 28
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.13 E-value=2.8e-09 Score=120.92 Aligned_cols=128 Identities=17% Similarity=0.243 Sum_probs=85.2
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCC--CCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC--KPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~--~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
+++++.|+. ..-.+.++..+ |++++ +.||+||+...+...+.. .+...+. .+|+ ...+.++++
T Consensus 328 lr~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~-------- 395 (562)
T PRK05677 328 LKLTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIGI-PVPS-TLCKVIDDD-------- 395 (562)
T ss_pred ceEEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccCc-cCCC-CEEEEECCC--------
Confidence 677777774 23344555666 78988 999999985333222211 1112222 1222 234444322
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEeee
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
..+|..|+.+||+|++ ..|+| -|+|||+.+++. ...+.|.||
T Consensus 396 -----------------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR 454 (562)
T PRK05677 396 -----------------GNELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDR 454 (562)
T ss_pred -----------------CCCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEec
Confidence 1145678999999975 34444 289999999984 347899999
Q ss_pred cCceEeccceeccHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.++++++.|++++..+|++++..
T Consensus 455 ~~d~i~~~G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 455 KKDMILVSGFNVYPNELEDVLAA 477 (562)
T ss_pred CcCeEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999965
No 29
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.12 E-value=1.1e-08 Score=115.08 Aligned_cols=130 Identities=19% Similarity=0.208 Sum_probs=82.9
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCCC--CCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK--PSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~--p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++.+++||. ....+.+...+ +++++ ++||+||+...+...+... +...+.. .|+.. +..++.+.
T Consensus 307 l~~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~~g~~-~~i~d~~~------- 375 (546)
T PRK08314 307 LRYIGGGGAAMPEAVAERLKELT-GLDYV-EGYGLTETMAQTHSNPPDRPKLQCLGIP-TFGVD-ARVIDPET------- 375 (546)
T ss_pred hheeeeccccCCHHHHHHHHHHc-CCcEE-ecccccccccceecCCCcCCCCCccCcc-cCCeE-EEEEeCCC-------
Confidence 456666663 22334555666 68888 9999999854332211100 0111111 12211 22222211
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceE-----------------eeeeCCEEEEecccCCCCEEEE
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-----------------RYRVGDVLRVAGFKNKAPQFNF 441 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-----------------RYr~GDvv~v~gf~~~~P~~~f 441 (628)
...|+.|+.+||+|.. ..|+| -|+|||++++.. ...+.+
T Consensus 376 -----------------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~ 434 (546)
T PRK08314 376 -----------------LEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFI 434 (546)
T ss_pred -----------------CcCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEE
Confidence 1246789999999975 33443 499999999873 357999
Q ss_pred eeecCceEeccceeccHHHHHHHHHHH
Q 006862 442 ICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 442 ~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
+||.++++++.|++++..+|+++|.+.
T Consensus 435 ~GR~~d~i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 435 TDRLKRMINASGFKVWPAEVENLLYKH 461 (546)
T ss_pred EecchhhEEeCCEEECHHHHHHHHHhC
Confidence 999999999999999999999999763
No 30
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.12 E-value=3.9e-08 Score=113.26 Aligned_cols=130 Identities=9% Similarity=0.093 Sum_probs=82.9
Q ss_pred eeEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccc-cCCCC-----CCCCCCceeecCCceEEEEEeCCCCC
Q 006862 306 YVDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGV-NLNPL-----CKPSEVSYTLVPTMAYFEFLPVHRNN 376 (628)
Q Consensus 306 ~i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi-~~~~~-----~~p~~~~~~l~~~~~~fEFip~~~~~ 376 (628)
.++.+++|+.. ...+.+++.+ +++++ +.||.||+...+ ...+. ..+...+. ..|+.. ++.++.+.
T Consensus 356 ~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~-p~~g~~-~~i~d~~~-- 429 (629)
T PRK10524 356 SLRALFLAGEPLDEPTASWISEAL-GVPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGV-PMYGYN-VKLLNEVT-- 429 (629)
T ss_pred heeEEEEeCCCCCHHHHHHHHHhc-CCCeE-eccccccccchhhcCCCCcccCcCCCCCccc-CcCCce-EEEEeCCC--
Confidence 36777777743 2234555666 68888 999999985221 11110 00111111 122221 33333211
Q ss_pred CCcccCCCCccccccccceeeeccccCCCceEEEEEeec------cceE-----------------eeeeCCEEEEeccc
Q 006862 377 GVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY------AGLY-----------------RYRVGDVLRVAGFK 433 (628)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~------~GLy-----------------RYr~GDvv~v~gf~ 433 (628)
. ..+..|+.+||+|+.. .|+| -|+|||++++..
T Consensus 430 -----------------g-----~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~-- 485 (629)
T PRK10524 430 -----------------G-----EPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDA-- 485 (629)
T ss_pred -----------------C-----CCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcC--
Confidence 1 1356899999999753 1222 399999999862
Q ss_pred CCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 434 NKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 434 ~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
...+.|+||.+|++++.|+++...+|+++|.+
T Consensus 486 --dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~ 517 (629)
T PRK10524 486 --DGYYFILGRTDDVINVAGHRLGTREIEESISS 517 (629)
T ss_pred --CCcEEEEEEecCeEEeCCEEeCHHHHHHHHHh
Confidence 45799999999999999999999999999975
No 31
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.11 E-value=1.6e-08 Score=112.09 Aligned_cols=63 Identities=14% Similarity=0.270 Sum_probs=51.1
Q ss_pred ccCCCceEEEEEeec--------------------cceEeeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHH
Q 006862 401 DVKLGQEYELVVTTY--------------------AGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVE 460 (628)
Q Consensus 401 eve~G~~YeLVvTt~--------------------~GLyRYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~ 460 (628)
.+..|+.+||+|++. .|.=-|++||++++. .-.+.|.||.++++++.|+|++..+
T Consensus 338 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~~-----~g~~~~~GR~~d~i~~~G~~v~~~~ 412 (503)
T PRK04813 338 KLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYLE-----DGLLFYQGRIDFQIKLNGYRIELEE 412 (503)
T ss_pred CCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEee-----CCeEEEeccccceEEECcEEeCHHH
Confidence 356788899999762 121139999999982 3479999999999999999999999
Q ss_pred HHHHHHHH
Q 006862 461 LQNAVKNA 468 (628)
Q Consensus 461 v~~av~~a 468 (628)
|++++...
T Consensus 413 iE~~l~~~ 420 (503)
T PRK04813 413 IEQNLRQS 420 (503)
T ss_pred HHHHHHhC
Confidence 99999763
No 32
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.11 E-value=7.4e-08 Score=111.68 Aligned_cols=159 Identities=16% Similarity=0.175 Sum_probs=93.5
Q ss_pred CCceEEEEEeec-----cceE------e------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHH
Q 006862 404 LGQEYELVVTTY-----AGLY------R------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVE 460 (628)
Q Consensus 404 ~G~~YeLVvTt~-----~GLy------R------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~ 460 (628)
.|+.+||+|+.. .|+| | |++||++++.. ...+.|+||.++++++.|+++...|
T Consensus 460 ~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i~GR~dd~Ik~~G~rI~p~E 535 (655)
T PRK03584 460 VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----HGGVVIYGRSDATLNRGGVRIGTAE 535 (655)
T ss_pred CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----CCeEEEEeeccCeeecCcEEECHHH
Confidence 588899999752 2444 1 78999999873 4589999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCceEEeEEEee-cCCCCCceEEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccCCCcc
Q 006862 461 LQNAVKNAVNHLVPFDAAVSEYTSYA-DTTTVPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKSI 539 (628)
Q Consensus 461 v~~av~~a~~~l~~~g~~l~eft~~~-d~~~~p~~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~l 539 (628)
|+.+|.+.. + |.+-.++. +.......-++|+++.. ....+.+..+++...+.+.|.. ..
T Consensus 536 IE~~l~~~p------~--V~ea~vvg~~~~~~g~~~~a~vv~~~--~~~~~~~~~~~l~~~~~~~L~~----------~~ 595 (655)
T PRK03584 536 IYRQVEALP------E--VLDSLVIGQEWPDGDVRMPLFVVLAE--GVTLDDALRARIRTTIRTNLSP----------RH 595 (655)
T ss_pred HHHHHHhCC------C--cceEEEEeeEcCCCCEEEEEEEEECC--CCCCcHHHHHHHHHHHHhhCCC----------Cc
Confidence 999997632 2 33444332 11112224456777652 1222222333444444444432 12
Q ss_pred CCeEEEEcC---CccHHHHHHHHH---hcCCCCCCCCCCcccCCHhHHHHHhh
Q 006862 540 GPLEIKIVE---PGTFDKLMDYAI---SLGASINQYKTPRCVKFAPIIELLNS 586 (628)
Q Consensus 540 ~pl~v~~V~---~GtF~~l~~~~~---~~G~~~~Q~K~Pr~~~~~~~~~~L~~ 586 (628)
.|-.|.+|. ...=.+.+...+ ..|...+|...+.-+.|++.++.+.+
T Consensus 596 ~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (655)
T PRK03584 596 VPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALANPEALDWFAD 648 (655)
T ss_pred CCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCcccccCHHHHHHHHH
Confidence 344555553 111112222222 24666665546666778888887754
No 33
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.10 E-value=2.2e-08 Score=111.28 Aligned_cols=59 Identities=22% Similarity=0.265 Sum_probs=50.6
Q ss_pred CceEEEEEeec---cceE-e------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 405 GQEYELVVTTY---AGLY-R------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 405 G~~YeLVvTt~---~GLy-R------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|+.+||+|++. .|++ + |+|||++++.. ...+.+.||.+++++++|.+++..+|++++..
T Consensus 365 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~----~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~ 439 (521)
T PRK06187 365 GEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDE----DGYLYITDRIKDVIISGGENIYPRELEDALYG 439 (521)
T ss_pred CCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcC----CCCEEEeecccceEEcCCeEECHHHHHHHHHh
Confidence 99999999873 4444 3 99999999874 34789999999999999999999999998865
No 34
>PLN02654 acetate-CoA ligase
Probab=99.10 E-value=5.8e-08 Score=113.07 Aligned_cols=161 Identities=14% Similarity=0.177 Sum_probs=93.8
Q ss_pred ccCCCceEEEEEee-----ccceEe----------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHH
Q 006862 401 DVKLGQEYELVVTT-----YAGLYR----------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEV 459 (628)
Q Consensus 401 eve~G~~YeLVvTt-----~~GLyR----------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~ 459 (628)
++..|+.+||+|.. ..|+|. |+|||+.+++. .-.+.|+||.+++|++.|++++..
T Consensus 474 ~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~----dG~l~i~GR~dd~I~~~G~ri~p~ 549 (666)
T PLN02654 474 EIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK----DGYYWLTGRVDDVINVSGHRIGTA 549 (666)
T ss_pred CCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC----CCcEEEeeeccCeEEeCCEEECHH
Confidence 35567789999975 233431 89999999973 457999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCc-eEEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccCCCc
Q 006862 460 ELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVPG-HYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKS 538 (628)
Q Consensus 460 ~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~-~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~ 538 (628)
||+.+|.+.. + |.+-.++.-....-| .-+.|+.++. ....+.+..+++...+.+.|.. .
T Consensus 550 EIE~~l~~~p------~--V~eaaVvg~~d~~~ge~~~a~Vvl~~--~~~~~~~l~~~l~~~~~~~L~~----------~ 609 (666)
T PLN02654 550 EVESALVSHP------Q--CAEAAVVGIEHEVKGQGIYAFVTLVE--GVPYSEELRKSLILTVRNQIGA----------F 609 (666)
T ss_pred HHHHHHHhCC------C--eeeEEEEeeEcCCCCeEEEEEEEECC--CCCCCHHHHHHHHHHHHHhCCC----------C
Confidence 9999997632 2 334444321111112 3345665542 1222222223333344333322 2
Q ss_pred cCCeEEEEcC---CccHHHHHHHHHh---cCCCCCCCCCCcccCCHhHHHHHhh
Q 006862 539 IGPLEIKIVE---PGTFDKLMDYAIS---LGASINQYKTPRCVKFAPIIELLNS 586 (628)
Q Consensus 539 l~pl~v~~V~---~GtF~~l~~~~~~---~G~~~~Q~K~Pr~~~~~~~~~~L~~ 586 (628)
..|-.|.+|. ...=.+.++..+. .|. ..+.+.+.-+.|++.++.+.+
T Consensus 610 ~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 662 (666)
T PLN02654 610 AAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLADPGVVDQLIA 662 (666)
T ss_pred cCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCcccccCHHHHHHHHH
Confidence 2344566652 1111233333232 332 225677888889999888764
No 35
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.10 E-value=1.9e-08 Score=113.26 Aligned_cols=63 Identities=21% Similarity=0.304 Sum_probs=53.2
Q ss_pred ccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQN 463 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~ 463 (628)
.+..|+.+||+|++ ..|+| -|+|||++++.. ...+.|+||.++++++.|++++..+|++
T Consensus 371 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~ 446 (540)
T PRK06164 371 LLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEH 446 (540)
T ss_pred CCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHH
Confidence 35679999999987 34443 399999999874 3478999999999999999999999999
Q ss_pred HHHH
Q 006862 464 AVKN 467 (628)
Q Consensus 464 av~~ 467 (628)
++..
T Consensus 447 ~l~~ 450 (540)
T PRK06164 447 ALEA 450 (540)
T ss_pred HHHh
Confidence 9965
No 36
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.09 E-value=1.9e-08 Score=111.91 Aligned_cols=129 Identities=19% Similarity=0.207 Sum_probs=82.5
Q ss_pred eeEEEEcCCc---cchHHHHHhhcCCC-ceeccccccccccccccCCCCCC-----CCCCceeecCCceEEEEEeCCCCC
Q 006862 306 YVDVIVTGTM---SQYIPILDYYSNGL-PLVCTMYASSECYFGVNLNPLCK-----PSEVSYTLVPTMAYFEFLPVHRNN 376 (628)
Q Consensus 306 ~i~~~~~G~~---~~y~~~l~~~~~g~-p~~~~~Y~aSEg~~gi~~~~~~~-----p~~~~~~l~~~~~~fEFip~~~~~ 376 (628)
.++.+++|+. ...+..+++.+ ++ +++ +.||+||+...+...+... +...+ ...++ .-++.++.+
T Consensus 282 ~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG-~~~~~-~~~~i~d~~--- 354 (513)
T PRK07656 282 SLRLAVTGAASMPVALLERFESEL-GVDIVL-TGYGLSEASGVTTFNRLDDDRKTVAGTIG-TAIAG-VENKIVNEL--- 354 (513)
T ss_pred ceeeEEecCCCCCHHHHHHHHHHc-CCCceE-eEEccccCCCceeecCccccccccCCCcc-ccCCC-cEEEEECCC---
Confidence 3666666663 23345566667 55 777 9999999932221111100 01111 11222 223333321
Q ss_pred CCcccCCCCccccccccceeeeccccCCCceEEEEEeec---cceE----------e----eeeCCEEEEecccCCCCEE
Q 006862 377 GVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY---AGLY----------R----YRVGDVLRVAGFKNKAPQF 439 (628)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~---~GLy----------R----Yr~GDvv~v~gf~~~~P~~ 439 (628)
...+..|+.+||+|++. .|+| + |+|||+.+... ...+
T Consensus 355 ----------------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~~ 408 (513)
T PRK07656 355 ----------------------GEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDE----EGYL 408 (513)
T ss_pred ----------------------CCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcC----CeeE
Confidence 12467899999999863 3333 2 89999999873 4579
Q ss_pred EEeeecCceEeccceeccHHHHHHHHHH
Q 006862 440 NFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 440 ~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.++||.++++++.|.+++..+|+++|..
T Consensus 409 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 409 YIVDRKKDMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred EEEecccceEEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999999999965
No 37
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.08 E-value=3.1e-08 Score=111.85 Aligned_cols=127 Identities=15% Similarity=0.195 Sum_probs=81.1
Q ss_pred eEEEEcCC-ccchHHHHHhhcCCCceeccccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCC
Q 006862 307 VDVIVTGT-MSQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMP 385 (628)
Q Consensus 307 i~~~~~G~-~~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~ 385 (628)
++++.+|. ..+-...+.+.+ |++++ +.||+||+.+.+...+...+...+.. .++ ++.+..+..+
T Consensus 269 lr~~~gg~~~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~~-~~~---~~i~~~~~~~--------- 333 (529)
T PRK07867 269 LRIVYGNEGAPGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPGALGPL-PPG---VAIVDPDTGT--------- 333 (529)
T ss_pred eEEEecCCCChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCCCcCCC-CCC---EEEEECCCCC---------
Confidence 45555443 233345555666 68888 99999998543322211111112221 222 5565533211
Q ss_pred ccccccccceeeeccccCCCc------------eEEEEE-ee---ccceE-------------eeeeCCEEEEecccCCC
Q 006862 386 KSLNEKERQELVDLVDVKLGQ------------EYELVV-TT---YAGLY-------------RYRVGDVLRVAGFKNKA 436 (628)
Q Consensus 386 ~~~~~~~~~~~v~l~eve~G~------------~YeLVv-Tt---~~GLy-------------RYr~GDvv~v~gf~~~~ 436 (628)
++..|+ .+||++ .. +.|+| +|+|||++++.. .
T Consensus 334 ---------------~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~ 394 (529)
T PRK07867 334 ---------------ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----D 394 (529)
T ss_pred ---------------CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----C
Confidence 122233 789998 32 45665 799999999873 3
Q ss_pred CEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 437 PQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 437 P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
..+.|+||.+++++++|+|+.+.+|++++.+
T Consensus 395 g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 425 (529)
T PRK07867 395 GYAYFAGRLGDWMRVDGENLGTAPIERILLR 425 (529)
T ss_pred CcEEEeccccCeEEECCEEeCHHHHHHHHHh
Confidence 4799999999999999999999999999976
No 38
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.08 E-value=4e-08 Score=110.29 Aligned_cols=63 Identities=17% Similarity=0.303 Sum_probs=53.4
Q ss_pred ccCCCceEEEEEee---ccceEe-------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNA 464 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~a 464 (628)
++..|+.+||+|++ ..|+|. |+|||+.++.. ...+.+.||.++++++.|+++...+|+.+
T Consensus 360 ~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~dd~i~~~G~~v~~~~IE~~ 435 (528)
T PRK07470 360 ELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA----RGFLYITGRASDMYISGGSNVYPREIEEK 435 (528)
T ss_pred CCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----CCeEEEeCCccceEEeCCEEECHHHHHHH
Confidence 46678999999976 345543 99999999873 45799999999999999999999999999
Q ss_pred HHH
Q 006862 465 VKN 467 (628)
Q Consensus 465 v~~ 467 (628)
|..
T Consensus 436 l~~ 438 (528)
T PRK07470 436 LLT 438 (528)
T ss_pred HHh
Confidence 975
No 39
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.07 E-value=1.9e-08 Score=112.22 Aligned_cols=130 Identities=17% Similarity=0.187 Sum_probs=82.9
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccc-cccCCCC---CCCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYF-GVNLNPL---CKPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~-gi~~~~~---~~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
++.+.+|+. ....+.+++.+++++++ +.||+||+.. +....+. ..+...+.. .++. .+..++.+
T Consensus 288 l~~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~~-~~~i~~~~------ 358 (523)
T PRK08316 288 LRKGYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGRP-VLNV-ETRVVDDD------ 358 (523)
T ss_pred ceEEEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCcccC-CCCc-EEEEEcCC------
Confidence 555555552 23356677778789998 9999999732 2111110 000111111 1111 11222211
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEee
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~g 443 (628)
...+..|+.+||++++ ..|+| .|+|||++++.. ...+.|+|
T Consensus 359 -------------------~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~g 415 (523)
T PRK08316 359 -------------------GNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVD 415 (523)
T ss_pred -------------------CCCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEec
Confidence 1135568899999986 34444 399999999873 45799999
Q ss_pred ecCceEeccceeccHHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~a 468 (628)
|.++++++.|++++..+|++++.+.
T Consensus 416 R~~~~i~~~G~~i~~~~iE~~l~~~ 440 (523)
T PRK08316 416 RKKDMIKTGGENVASREVEEALYTH 440 (523)
T ss_pred ccccEEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999999653
No 40
>PLN02246 4-coumarate--CoA ligase
Probab=99.07 E-value=1.6e-08 Score=113.91 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=83.6
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCC-------CCCCCceeecCCceEEEEEeCCCCC
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC-------KPSEVSYTLVPTMAYFEFLPVHRNN 376 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~-------~p~~~~~~l~~~~~~fEFip~~~~~ 376 (628)
++.++.|+.. .....+++.+++++++ +.||+||+...+...... .+...+.. .++ .-.+.++++.
T Consensus 300 lr~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~~-- 374 (537)
T PLN02246 300 IRMVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTV-VRN-AELKIVDPET-- 374 (537)
T ss_pred eeEEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCccccc-cCC-cEEEEecCCC--
Confidence 6677777653 3345666777777787 899999985321110000 01111111 111 1222222211
Q ss_pred CCcccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEE
Q 006862 377 GVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQF 439 (628)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~ 439 (628)
...+..|+.+||+|+. ..|+| -|+|||+.++.. .-.+
T Consensus 375 ----------------------~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l 428 (537)
T PLN02246 375 ----------------------GASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDEL 428 (537)
T ss_pred ----------------------CCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeE
Confidence 1246789999999975 34443 388999999873 3479
Q ss_pred EEeeecCceEeccceeccHHHHHHHHHH
Q 006862 440 NFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 440 ~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.|+||.++++++.|++++..+|++++..
T Consensus 429 ~~~GR~dd~i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 429 FIVDRLKELIKYKGFQVAPAELEALLIS 456 (537)
T ss_pred EEEecccceEEECCEEECcHHHHHHHHh
Confidence 9999999999999999999999999975
No 41
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.06 E-value=6e-08 Score=112.66 Aligned_cols=159 Identities=19% Similarity=0.204 Sum_probs=91.9
Q ss_pred CCceEEEEEeec-----cceE------e------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHH
Q 006862 404 LGQEYELVVTTY-----AGLY------R------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVE 460 (628)
Q Consensus 404 ~G~~YeLVvTt~-----~GLy------R------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~ 460 (628)
.|+.+||+|+.. .|+| + |++||++++.. ...+.|+||.+++|++.|+++...|
T Consensus 461 ~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l~i~GR~dd~I~~~G~ri~p~E 536 (652)
T TIGR01217 461 TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGIVIHGRSDSTLNPQGVRMGSAE 536 (652)
T ss_pred CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcEEEEecccCeEecCCEEcCHHH
Confidence 488899999762 3444 1 78999999983 4579999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCceEEeEEEee-cCCCCCceEEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhcccCCCcc
Q 006862 461 LQNAVKNAVNHLVPFDAAVSEYTSYA-DTTTVPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKSI 539 (628)
Q Consensus 461 v~~av~~a~~~l~~~g~~l~eft~~~-d~~~~p~~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~~~l 539 (628)
|+.+|.+.. + |.+-.++. +.....-.-+.|+.+.. +...+.+..+++...+.+.|.. ..
T Consensus 537 IE~~l~~~p------~--V~eaavvg~~~~~~ge~~~afVv~~~--~~~~~~~~~~~l~~~~~~~l~~----------~~ 596 (652)
T TIGR01217 537 IYNAVERLD------E--VRESLCIGQEQPDGGYRVVLFVHLAP--GATLDDALLDRIKRTIRAGLSP----------RH 596 (652)
T ss_pred HHHHHHhCC------C--cceEEEEeeecCCCCEEEEEEEEECC--CCCCCHHHHHHHHHHHHhhCCC----------Cc
Confidence 999997632 2 33444332 11111113345666642 1222222233333444333332 12
Q ss_pred CCeEEEEcC---CccHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhh
Q 006862 540 GPLEIKIVE---PGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNS 586 (628)
Q Consensus 540 ~pl~v~~V~---~GtF~~l~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~ 586 (628)
.|-.|.+|. ...=.+.++..+.+=.....++.+.-+.|++.++.+..
T Consensus 597 ~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~~~~~~~~~~~~~~l~~~~~ 646 (652)
T TIGR01217 597 VPDEIIEVPGIPHTLTGKRVEVAVKRVLQGTPVDNPGAIDNPELLDLYEE 646 (652)
T ss_pred CCCEEEECCCCCCCCCccChHHHHHHHHcCCCCCCcccccCHHHHHHHHH
Confidence 344555543 22222233322221122234667778889999988754
No 42
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.06 E-value=1.1e-08 Score=113.72 Aligned_cols=130 Identities=12% Similarity=0.078 Sum_probs=86.5
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCC---CC-CCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNP---LC-KPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~---~~-~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
++.+++|+. ...++.+.+.+++++++ ++||+||+........ .+ .+...+.. .|+ .-.+.++.+
T Consensus 266 l~~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~~~~------ 336 (497)
T PRK06145 266 LAWCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGRA-LAH-VEIRIADGA------ 336 (497)
T ss_pred ceEEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCcccC-CCC-ceEEEECCC------
Confidence 566666764 33456667777788888 9999999864322111 00 11112221 122 123333221
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEee
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~g 443 (628)
...+..|+.+||+|++ ..|+| .|+|||+++... .-.+.|+|
T Consensus 337 -------------------~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~G 393 (497)
T PRK06145 337 -------------------GRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTD 393 (497)
T ss_pred -------------------CCCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEec
Confidence 1135578899999986 45666 399999999873 34799999
Q ss_pred ecCceEeccceeccHHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~a 468 (628)
|.++++++.|+++...+|++++...
T Consensus 394 R~~~~i~~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 394 RKKDMIISGGENIASSEVERVIYEL 418 (497)
T ss_pred cccceEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999999764
No 43
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.05 E-value=4.1e-08 Score=111.28 Aligned_cols=128 Identities=20% Similarity=0.243 Sum_probs=84.4
Q ss_pred eEEEEcCCccc---hHHHHHhhcCCCceeccccccccccccccCCCCCC---CCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTMSQ---YIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK---PSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~~~---y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~---p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++++++|+... -...++..+ |++++ +.||+||+...+....... +...++. .|+ .-++.++.+
T Consensus 327 lr~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~~~~------- 395 (560)
T PRK08974 327 LKLSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGLP-VPS-TEIKLVDDD------- 395 (560)
T ss_pred eeEEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCccccC-cCC-CEEEEECCC-------
Confidence 56777777432 234455555 78988 8999999854332111100 1112221 122 224444322
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe-------------eeeCCEEEEecccCCCCEEEEeee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
..++..|+.+||+|++ ..|+|. |+|||+++++. ...+.|+||
T Consensus 396 ------------------~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR 453 (560)
T PRK08974 396 ------------------GNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDR 453 (560)
T ss_pred ------------------CCCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEec
Confidence 1246678999999976 345543 99999999863 357999999
Q ss_pred cCceEeccceeccHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.++++++.|++++..+|+++|.+
T Consensus 454 ~~d~i~~~G~~i~~~~IE~~l~~ 476 (560)
T PRK08974 454 KKDMILVSGFNVYPNEIEDVVML 476 (560)
T ss_pred ccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999965
No 44
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.05 E-value=2.4e-08 Score=112.60 Aligned_cols=63 Identities=17% Similarity=0.268 Sum_probs=53.5
Q ss_pred ccCCCceEEEEEee---ccceE------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAV 465 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av 465 (628)
.+..|+.+||+|++ ..|+| .|+|||++++.. ...+.|+||.++++++.|+++.+.+|+.++
T Consensus 384 ~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l 459 (538)
T TIGR03208 384 KLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSKDVIIRGGENIPVVEIENLL 459 (538)
T ss_pred CCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccCceEEECCEEECHHHHHHHH
Confidence 35678999999976 34555 299999999973 347999999999999999999999999999
Q ss_pred HH
Q 006862 466 KN 467 (628)
Q Consensus 466 ~~ 467 (628)
.+
T Consensus 460 ~~ 461 (538)
T TIGR03208 460 YQ 461 (538)
T ss_pred hc
Confidence 65
No 45
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.05 E-value=5.6e-08 Score=109.63 Aligned_cols=129 Identities=11% Similarity=0.058 Sum_probs=83.4
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCCC-----CCCCceeecCCceEEEEEeCCCCCCC
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK-----PSEVSYTLVPTMAYFEFLPVHRNNGV 378 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~-----p~~~~~~l~~~~~~fEFip~~~~~~~ 378 (628)
++.+++|+. ......+.+.+++.++. ..||+||+....-....+. +...+. ..|+ ..++.++.+
T Consensus 319 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~~~i~d~~----- 390 (558)
T PRK12583 319 LRTGIMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQPH-LEVKVVDPD----- 390 (558)
T ss_pred heEEEecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCc-cCCC-CeEEEECCC-----
Confidence 566555553 33345566666566777 8999999854321111110 011221 1222 234444432
Q ss_pred cccCCCCccccccccceeeeccccCCCceEEEEEeec---cceE--------------eeeeCCEEEEecccCCCCEEEE
Q 006862 379 ANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY---AGLY--------------RYRVGDVLRVAGFKNKAPQFNF 441 (628)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~---~GLy--------------RYr~GDvv~v~gf~~~~P~~~f 441 (628)
..++..|+.+||+|++. .|+| .|+|||+++++. .-.+.|
T Consensus 391 --------------------~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i 446 (558)
T PRK12583 391 --------------------GATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRI 446 (558)
T ss_pred --------------------CCCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEE
Confidence 12467899999999763 3444 389999999873 347999
Q ss_pred eeecCceEeccceeccHHHHHHHHHH
Q 006862 442 ICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 442 ~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.||.++++++.|++++..+|++++..
T Consensus 447 ~GR~~~~i~~~G~~v~~~~IE~~l~~ 472 (558)
T PRK12583 447 VGRSKDMIIRGGENIYPREIEEFLFT 472 (558)
T ss_pred EecccceeEECCEEeCHHHHHHHHHh
Confidence 99999999999999999999999965
No 46
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.05 E-value=4e-08 Score=111.11 Aligned_cols=130 Identities=15% Similarity=0.254 Sum_probs=83.4
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceecccccccccc-ccccCC-CCC-----CCCCCceeecCCceEEEEEeCCCCC
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECY-FGVNLN-PLC-----KPSEVSYTLVPTMAYFEFLPVHRNN 376 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~-~gi~~~-~~~-----~p~~~~~~l~~~~~~fEFip~~~~~ 376 (628)
++.+++|+. ...++.++..+++++++ +.||+||+. +++... +.. .+...+.. +|+.. .++++.+.
T Consensus 305 l~~i~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~-~~~~~-v~i~d~~~-- 379 (546)
T PLN02330 305 LQAIMTAAAPLAPELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFI-LPNLE-VKFIDPDT-- 379 (546)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCccccc-cCCcE-EEEEeCCC--
Confidence 455566663 33456666777789999 999999974 222110 000 00011211 12211 33333221
Q ss_pred CCcccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEE
Q 006862 377 GVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQF 439 (628)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~ 439 (628)
...+.+|+.+||+|+. ..|+| -|+|||++++.. .-.+
T Consensus 380 ----------------------~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l 433 (546)
T PLN02330 380 ----------------------GRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDI 433 (546)
T ss_pred ----------------------CccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcE
Confidence 1235679999999975 34444 289999999873 2368
Q ss_pred EEeeecCceEeccceeccHHHHHHHHHH
Q 006862 440 NFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 440 ~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.|+||.++++++.|++++..+|+.++..
T Consensus 434 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 461 (546)
T PLN02330 434 FIVDRIKELIKYKGFQVAPAELEAILLT 461 (546)
T ss_pred EEEechHHhhhcCCEEECHHHHHHHHHh
Confidence 8999999999999999999999999965
No 47
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.05 E-value=1.5e-08 Score=112.64 Aligned_cols=129 Identities=15% Similarity=0.130 Sum_probs=86.7
Q ss_pred eEEEEcCCc--cchHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTM--SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~--~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
+..+.+|+. ..-..++...+++++++ +.||+||+.......+.. .+...+.. +|+ ..++.++.+
T Consensus 256 ~~~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~-------- 324 (487)
T PRK07638 256 MKIISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGRP-FHN-VQVRICNEA-------- 324 (487)
T ss_pred eEEEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCcc-cCC-cEEEEECCC--------
Confidence 455555652 33456677788889998 899999995433222111 11112221 122 234444322
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeec
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRK 445 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~ 445 (628)
...++.|+.+||+|++ ..|+| .|+|||++++.. ...+.|+||.
T Consensus 325 -----------------g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~ 383 (487)
T PRK07638 325 -----------------GEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGRE 383 (487)
T ss_pred -----------------CCCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecC
Confidence 1246789999999986 34444 379999998873 4589999999
Q ss_pred CceEeccceeccHHHHHHHHHH
Q 006862 446 NVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 446 ~~~l~i~gek~~e~~v~~av~~ 467 (628)
+|++++.|++++..+|++++..
T Consensus 384 ~d~i~~~G~~v~~~eiE~~l~~ 405 (487)
T PRK07638 384 KNMILFGGINIFPEEIESVLHE 405 (487)
T ss_pred CCeEEeCCEEECHHHHHHHHHh
Confidence 9999999999999999999976
No 48
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.04 E-value=7e-09 Score=111.68 Aligned_cols=129 Identities=17% Similarity=0.226 Sum_probs=83.7
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCCCCC-------CCceeecCCceEEEEEeCCCCC
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPS-------EVSYTLVPTMAYFEFLPVHRNN 376 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p~-------~~~~~l~~~~~~fEFip~~~~~ 376 (628)
++.+..|+. ...++.+++.+++++++ ..||+||+...+...+..... ..+. ..|+. ....++++
T Consensus 236 l~~v~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~~~~--- 309 (408)
T TIGR01733 236 LRLVILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIGR-PLANT-RLYVLDDD--- 309 (408)
T ss_pred ceEEEEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccCc-ccCCc-eEEEECCC---
Confidence 555565553 44466777788668888 899999984322111111100 0111 11221 12222211
Q ss_pred CCcccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE----------------------eeeeCCEEEEec
Q 006862 377 GVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY----------------------RYRVGDVLRVAG 431 (628)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy----------------------RYr~GDvv~v~g 431 (628)
...+..|+.+||+|++ ..|+| .|+|||+.++..
T Consensus 310 ----------------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~ 367 (408)
T TIGR01733 310 ----------------------LRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP 367 (408)
T ss_pred ----------------------CCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC
Confidence 1245678899999986 33444 599999999984
Q ss_pred ccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 432 FKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 432 f~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
...+.|+||.++++++.|++++..+|++++..
T Consensus 368 ----~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 368 ----DGNLEFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred ----CCCEEEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 34699999999999999999999999999964
No 49
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.04 E-value=5.3e-08 Score=109.68 Aligned_cols=130 Identities=14% Similarity=0.171 Sum_probs=84.5
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCC----C--CC-CCCceeecCCceEEEEEeCCCCC
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPL----C--KP-SEVSYTLVPTMAYFEFLPVHRNN 376 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~----~--~p-~~~~~~l~~~~~~fEFip~~~~~ 376 (628)
++.+.+|+. ...++.+.+.+ +++++ +.||.||+...+...+. + .+ ...+.+-.+.....+.++.+.
T Consensus 297 lr~i~~~G~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~g-- 372 (534)
T PRK05852 297 LRFIRSCSAPLTAETAQALQTEF-AAPVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDG-- 372 (534)
T ss_pred eeEEEECCCCCCHHHHHHHHHHh-CCChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECCCC--
Confidence 667766664 23345566777 68888 89999998432221110 0 00 011121001222334443221
Q ss_pred CCcccCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe-------------eeeCCEEEEecccCCCCEEE
Q 006862 377 GVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQFN 440 (628)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR-------------Yr~GDvv~v~gf~~~~P~~~ 440 (628)
.++.+|+.+||+|+. ..|+|+ |+|||+.+++. ...+.
T Consensus 373 -----------------------~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~----dG~l~ 425 (534)
T PRK05852 373 -----------------------LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSA----AGDLS 425 (534)
T ss_pred -----------------------CCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeC----CCcEE
Confidence 145689999999976 345553 89999999872 34799
Q ss_pred EeeecCceEeccceeccHHHHHHHHHH
Q 006862 441 FICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 441 f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|+||.++++++.|+++...+|+.++.+
T Consensus 426 ~~gR~~d~i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 426 IRGRIKELINRGGEKISPERVEGVLAS 452 (534)
T ss_pred EEecchhhEEECCEEECHHHHHHHHHh
Confidence 999999999999999999999999965
No 50
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.04 E-value=1.5e-08 Score=114.60 Aligned_cols=129 Identities=20% Similarity=0.221 Sum_probs=83.7
Q ss_pred eeEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 306 YVDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 306 ~i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
.++.+.+|+.. ...+.++..+ +++++ +.||+||+...+...+.. .+...+..+ ++ .-.+.++.+
T Consensus 328 ~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~-~g-~~v~i~d~~------ 397 (557)
T PRK07059 328 KLIVANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGLPL-PS-TEVSIRDDD------ 397 (557)
T ss_pred hheEEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccCcc-CC-cEEEEECCC------
Confidence 35666767642 3344555666 78988 999999985433221111 011122211 11 223443321
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEe
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~ 442 (628)
. ..+..|+.+||+|++ ..|+| -|+|||++++.. ...+.|+
T Consensus 398 --------------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~ 454 (557)
T PRK07059 398 --------------G-----NDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIV 454 (557)
T ss_pred --------------C-----CCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEe
Confidence 1 135678899999986 23333 289999999873 3478999
Q ss_pred eecCceEeccceeccHHHHHHHHHH
Q 006862 443 CRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 443 gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
||.++++++.|+++++.+|++++..
T Consensus 455 GR~~~~i~~~G~~i~p~~iE~~l~~ 479 (557)
T PRK07059 455 DRKKDMILVSGFNVYPNEIEEVVAS 479 (557)
T ss_pred cccccceEECCEEEcHHHHHHHHHh
Confidence 9999999999999999999999966
No 51
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.03 E-value=2.4e-07 Score=107.03 Aligned_cols=63 Identities=13% Similarity=0.090 Sum_probs=52.4
Q ss_pred ccCCCceEEEEEeec------cceE-----------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceecc
Q 006862 401 DVKLGQEYELVVTTY------AGLY-----------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTD 457 (628)
Q Consensus 401 eve~G~~YeLVvTt~------~GLy-----------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~ 457 (628)
++..|+.+||+|+.. .|+| .|+|||++++.. .-.+.|+||.++++++.|+++.
T Consensus 431 ~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----dG~l~i~GR~dd~ik~~G~rv~ 506 (628)
T TIGR02316 431 PCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----DGYTFILGRTDDVINVAGHRLG 506 (628)
T ss_pred CCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----CCcEEEEEcCcceEEeCCEEeC
Confidence 356788999999753 2333 399999999873 3479999999999999999999
Q ss_pred HHHHHHHHHH
Q 006862 458 EVELQNAVKN 467 (628)
Q Consensus 458 e~~v~~av~~ 467 (628)
..+|+.+|..
T Consensus 507 ~~eIE~~l~~ 516 (628)
T TIGR02316 507 TREIEESVSS 516 (628)
T ss_pred HHHHHHHHHh
Confidence 9999999975
No 52
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.02 E-value=1.3e-07 Score=105.44 Aligned_cols=129 Identities=17% Similarity=0.253 Sum_probs=82.2
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+.+|+. ....+.++..+++++++ ..||.||+.......+.. .+...+- ..|+. .+..++.+
T Consensus 276 l~~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~~-~~~i~~~~------- 345 (515)
T TIGR03098 276 LRYLTNSGGAMPRATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGK-AIPNA-EVLVLRED------- 345 (515)
T ss_pred eEEEEecCCcCCHHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCcce-ecCCC-EEEEECCC-------
Confidence 566666663 33345666777778888 999999985322221111 0111111 12222 23333321
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceE-------------------------eeeeCCEEEEecc
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY-------------------------RYRVGDVLRVAGF 432 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy-------------------------RYr~GDvv~v~gf 432 (628)
. ..+..|+.+||++.+ ..|+| .|+|||++++..
T Consensus 346 -------------~-----~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~- 406 (515)
T TIGR03098 346 -------------G-----SECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE- 406 (515)
T ss_pred -------------C-----CCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC-
Confidence 1 134568888999965 23443 378999999863
Q ss_pred cCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 433 KNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 433 ~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.-.+.|.||.++++++.|++++..+|++++..
T Consensus 407 ---~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~ 438 (515)
T TIGR03098 407 ---EGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYA 438 (515)
T ss_pred ---CceEEEEeccccceecCCEEeCHHHHHHHHhc
Confidence 34789999999999999999999999999965
No 53
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.02 E-value=7.8e-09 Score=119.83 Aligned_cols=132 Identities=15% Similarity=0.177 Sum_probs=81.8
Q ss_pred eEEEEcCCccch---HHHHHhhcCCCceeccccccccccccccCCCC--CCCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTMSQY---IPILDYYSNGLPLVCTMYASSECYFGVNLNPL--CKPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~~~y---~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~--~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++.+++||...- .+.++..+ |++++ ++||+||+...+..... ..+...+. ..|+. -..+++.++..
T Consensus 378 lr~~~~gGa~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~pg~-~v~i~d~~~~~----- 448 (651)
T PLN02736 378 VRFMSSGASPLSPDVMEFLRICF-GGRVL-EGYGMTETSCVISGMDEGDNLSGHVGS-PNPAC-EVKLVDVPEMN----- 448 (651)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHh-CCCeE-EEechHHhchheeccCCCCCCCCccCC-ccCce-EEEEEEccccC-----
Confidence 677777775332 33444456 68888 99999998543322111 01111221 12222 23334322110
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEeee
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
. ..+.+++..+||+|.. +.|+|. |+|||+.++.. .-.+.|+||
T Consensus 449 --------------~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR 508 (651)
T PLN02736 449 --------------Y--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDR 508 (651)
T ss_pred --------------c--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEe
Confidence 0 0122344567999965 567662 89999999983 347999999
Q ss_pred cCceEec-cceeccHHHHHHHHHH
Q 006862 445 KNVVLSI-DSDKTDEVELQNAVKN 467 (628)
Q Consensus 445 ~~~~l~i-~gek~~e~~v~~av~~ 467 (628)
.++++++ .|+++.+.+|++++..
T Consensus 509 ~kd~ik~~~G~~V~p~eIE~~l~~ 532 (651)
T PLN02736 509 KKNIFKLAQGEYIAPEKIENVYAK 532 (651)
T ss_pred chhheEcCCCcEechHHHHHHHhc
Confidence 9999997 6999999999999965
No 54
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.00 E-value=2.7e-08 Score=110.34 Aligned_cols=62 Identities=18% Similarity=0.298 Sum_probs=52.5
Q ss_pred cCCCceEEEEEeec---cceEe-------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHH
Q 006862 402 VKLGQEYELVVTTY---AGLYR-------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAV 465 (628)
Q Consensus 402 ve~G~~YeLVvTt~---~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av 465 (628)
+..|+.+||+|++. .|+|. |+|||+++.+. ...+.|+||.+++++..|+++.+.+|++++
T Consensus 338 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l 413 (496)
T PRK06839 338 VEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVGRKKEMIISGGENIYPLEVEQVI 413 (496)
T ss_pred CCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEeccccceEEECCEEECHHHHHHHH
Confidence 67899999999863 34432 89999999873 347889999999999999999999999999
Q ss_pred HH
Q 006862 466 KN 467 (628)
Q Consensus 466 ~~ 467 (628)
..
T Consensus 414 ~~ 415 (496)
T PRK06839 414 NK 415 (496)
T ss_pred Hh
Confidence 65
No 55
>PRK07787 acyl-CoA synthetase; Validated
Probab=98.99 E-value=1.8e-07 Score=103.75 Aligned_cols=128 Identities=18% Similarity=0.229 Sum_probs=80.0
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCC--CCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC--KPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~--~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++.+++|+. ...++.++..+ +++++ ++||.||+.+.+...... .+...+.. .++ .-..++..+
T Consensus 243 l~~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~-~~g-~~~~i~d~~-------- 310 (471)
T PRK07787 243 ARLLVSGSAALPVPVFDRLAALT-GHRPV-ERYGMTETLITLSTRADGERRPGWVGLP-LAG-VETRLVDED-------- 310 (471)
T ss_pred eeEEEECCCCCCHHHHHHHHHHc-CCCee-cccCccccCcceecCCCCcccCCccccc-CCC-cEEEEECCC--------
Confidence 566777764 23345666667 68888 999999986533111110 01111211 122 122222221
Q ss_pred CCCCccccccccceeeeccccC-CCc-eEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEe
Q 006862 382 ISMPKSLNEKERQELVDLVDVK-LGQ-EYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve-~G~-~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~ 442 (628)
.. ++. .|+ .+||+|++ ..|+| -|+|||+..+.. ...+.++
T Consensus 311 ------------~~-----~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~----dg~l~~~ 369 (471)
T PRK07787 311 ------------GG-----PVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDP----DGMHRIV 369 (471)
T ss_pred ------------CC-----CCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcC----CCCEEEe
Confidence 11 121 233 68999986 34555 299999999862 4579999
Q ss_pred eec-CceEeccceeccHHHHHHHHHH
Q 006862 443 CRK-NVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 443 gR~-~~~l~i~gek~~e~~v~~av~~ 467 (628)
||. ++++++.|+|++..+|+++|..
T Consensus 370 GR~~d~~i~~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 370 GRESTDLIKSGGYRIGAGEIETALLG 395 (471)
T ss_pred CCCCceeEeeCCEEECHHHHHHHHHh
Confidence 996 8999999999999999999975
No 56
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=98.99 E-value=7.4e-08 Score=108.32 Aligned_cols=129 Identities=15% Similarity=0.172 Sum_probs=82.6
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++++++|+.. .....+++.+ |++++ +.||+||+.+...--... .+...+..+.++ ...+.++.+
T Consensus 301 lr~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~-~~v~i~d~~------- 370 (527)
T TIGR02275 301 LKLLQVGGAKFSEAAARRVPAVF-GCQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPD-DEVRVVDDH------- 370 (527)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHh-CCeEE-eeeccCccCccccCCCCccccccccCCCCCCCC-ceEEEECCC-------
Confidence 6777777742 2334455556 68888 999999975432110000 001122222111 122222211
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~g 443 (628)
...+..|+.+||+|+. ..|+|. |+|||+.++.. ...+.|+|
T Consensus 371 ------------------g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~g 428 (527)
T TIGR02275 371 ------------------GNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVG 428 (527)
T ss_pred ------------------CCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEe
Confidence 1135679999999974 345542 99999999973 45788999
Q ss_pred ecCceEeccceeccHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|.+++++++|+++...+|+++|.+
T Consensus 429 R~~d~i~~~G~~v~~~eiE~~l~~ 452 (527)
T TIGR02275 429 RAKDQINRGGEKIAAEEIENLLLA 452 (527)
T ss_pred cccceeecCCEEECHHHHHHHHHh
Confidence 999999999999999999999975
No 57
>PRK13388 acyl-CoA synthetase; Provisional
Probab=98.98 E-value=8.9e-08 Score=108.38 Aligned_cols=129 Identities=18% Similarity=0.166 Sum_probs=78.8
Q ss_pred hHHHHHhhcCCCceeccccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCCccccccccceee
Q 006862 318 YIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEKERQELV 397 (628)
Q Consensus 318 y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~~~~~v 397 (628)
....+.+.+ +++++ +.||+||+...+...+...+...+..+ |+ .+++..+..... . .. .-+++++.+
T Consensus 279 ~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p~-~g---~~i~~~~~~~~~-~-----~~-~~d~~g~~~ 345 (540)
T PRK13388 279 DIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGRGA-PG---VAIYNPETLTEC-A-----VA-RFDAHGALL 345 (540)
T ss_pred HHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCCCC-CC---cEEEcCCCCccc-c-----ce-eccCccccc
Confidence 345555666 68888 999999985433222222223334432 33 344433221100 0 00 000011111
Q ss_pred eccccCCCceEEEEEe-e---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHH
Q 006862 398 DLVDVKLGQEYELVVT-T---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVE 460 (628)
Q Consensus 398 ~l~eve~G~~YeLVvT-t---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~ 460 (628)
. ..|+.+||+++ . +.|+| .|+|||+.+.+. ...+.|+||.+++++++|++++..+
T Consensus 346 ~----~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G~~v~p~e 417 (540)
T PRK13388 346 N----ADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDGENLSAAP 417 (540)
T ss_pred c----CCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECCEEeCHHH
Confidence 1 24678999997 3 34555 499999999973 3479999999999999999999999
Q ss_pred HHHHHHH
Q 006862 461 LQNAVKN 467 (628)
Q Consensus 461 v~~av~~ 467 (628)
|++++.+
T Consensus 418 IE~~l~~ 424 (540)
T PRK13388 418 IERILLR 424 (540)
T ss_pred HHHHHHh
Confidence 9999976
No 58
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=98.98 E-value=9.5e-08 Score=107.65 Aligned_cols=130 Identities=15% Similarity=0.142 Sum_probs=87.3
Q ss_pred CceeEEEEcCCccc---hHHHHHhhcCCCceeccccccccccccccCCCCC--CCCCCceeecCCceEEEEEeCCCCCCC
Q 006862 304 TKYVDVIVTGTMSQ---YIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC--KPSEVSYTLVPTMAYFEFLPVHRNNGV 378 (628)
Q Consensus 304 l~~i~~~~~G~~~~---y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~--~p~~~~~~l~~~~~~fEFip~~~~~~~ 378 (628)
++.++.+.+.|-.. -...+.+.+ |+++. +.||.||+.. +.+.+.. .+...+. -+|.. -.+.++.+ .
T Consensus 289 lssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~-d~~gqTEtg~-~~~~~~~~~~~g~~g~-p~pG~-~~~vvdd~-g--- 359 (528)
T COG0365 289 LSSLRVLGSAGEPLNPEAFEWFYSAL-GVWIL-DIYGQTETGM-GFIAGRPPVKNGSSGL-PLPGY-AVRRVDDE-G--- 359 (528)
T ss_pred chhheeeeccCCCCCHHHHHHHHHHh-CCCEe-ccccccccCc-cccCCCCCcCCCCCCC-CCCCc-eeEEECCC-C---
Confidence 33467777666432 234455667 59999 9999999972 2222222 1111222 22332 23444433 1
Q ss_pred cccCCCCccccccccceeeeccccCCCceEEEEEeec-----cceEe-------------eeeCCEEEEecccCCCCEEE
Q 006862 379 ANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY-----AGLYR-------------YRVGDVLRVAGFKNKAPQFN 440 (628)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~-----~GLyR-------------Yr~GDvv~v~gf~~~~P~~~ 440 (628)
.++.+|+ ++|||... .|+|+ |.+||...+. ..-.|.
T Consensus 360 ---------------------~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~D----edGy~~ 413 (528)
T COG0365 360 ---------------------NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERD----EDGYFW 413 (528)
T ss_pred ---------------------CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEc----cCCCEE
Confidence 1356788 99999852 35676 9999999988 346899
Q ss_pred EeeecCceEeccceeccHHHHHHHHHHH
Q 006862 441 FICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 441 f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
|+||.+|+||+.|-.+...||+++|.+.
T Consensus 414 i~GR~DDvI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 414 LHGRSDDVIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred EEeeccceEeccCeeccHHHHHHHHHhC
Confidence 9999999999999999999999999763
No 59
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.97 E-value=3.9e-08 Score=120.46 Aligned_cols=64 Identities=13% Similarity=0.167 Sum_probs=54.5
Q ss_pred ccCCCceEEEEEee---ccceE-----------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY-----------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVE 460 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy-----------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~ 460 (628)
++.+|+.+||+|+. ..|+| .|+|||+++++. ...+.|+||.+|+++++|++++..+
T Consensus 981 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~d~i~~~G~~v~~~e 1056 (1146)
T PRK08633 981 ELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE----DGFLTITDRYSRFAKIGGEMVPLGA 1056 (1146)
T ss_pred cCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC----CceEEEEecccchhhhCcEEECHHH
Confidence 46789999999975 34444 399999999983 4579999999999999999999999
Q ss_pred HHHHHHHH
Q 006862 461 LQNAVKNA 468 (628)
Q Consensus 461 v~~av~~a 468 (628)
|++++.+.
T Consensus 1057 iE~~l~~~ 1064 (1146)
T PRK08633 1057 VEEELAKA 1064 (1146)
T ss_pred HHHHHHhc
Confidence 99999764
No 60
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=98.96 E-value=2.4e-08 Score=113.55 Aligned_cols=60 Identities=13% Similarity=0.187 Sum_probs=51.3
Q ss_pred CCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHH
Q 006862 404 LGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVK 466 (628)
Q Consensus 404 ~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~ 466 (628)
.|+.+||+|.. ..|+| -|+|||+.++.. .-.+.|+||.+++++++|+++++.+|++++.
T Consensus 382 ~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 457 (563)
T PLN02860 382 SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGNLWLIGRSNDRIKTGGENVYPEEVEAVLS 457 (563)
T ss_pred CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCCEEEeecccceeEECCEEccHHHHHHHHH
Confidence 68899999976 34554 389999999973 4578999999999999999999999999997
Q ss_pred H
Q 006862 467 N 467 (628)
Q Consensus 467 ~ 467 (628)
.
T Consensus 458 ~ 458 (563)
T PLN02860 458 Q 458 (563)
T ss_pred h
Confidence 6
No 61
>PRK12467 peptide synthase; Provisional
Probab=98.95 E-value=2.4e-08 Score=135.82 Aligned_cols=128 Identities=19% Similarity=0.269 Sum_probs=83.2
Q ss_pred EEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCCCCCC------CceeecCCceEEEEEeCCCCCCC
Q 006862 308 DVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSE------VSYTLVPTMAYFEFLPVHRNNGV 378 (628)
Q Consensus 308 ~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p~~------~~~~l~~~~~~fEFip~~~~~~~ 378 (628)
+.+++||.. .-.+.+...+++++++ +.||.||+.+.+.......... .+. ..++.. +..++.+
T Consensus 774 r~i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~-~~i~d~~----- 845 (3956)
T PRK12467 774 RALVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQ-PLANLG-LYILDHY----- 845 (3956)
T ss_pred cEEEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCcccC-CcCCCE-EEEECCC-----
Confidence 556666643 2334555566678999 9999999965432221111000 111 112222 1112111
Q ss_pred cccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE---------------------eeeeCCEEEEecccC
Q 006862 379 ANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY---------------------RYRVGDVLRVAGFKN 434 (628)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy---------------------RYr~GDvv~v~gf~~ 434 (628)
...|..|+.+||+|+. ..|+| -|||||+++...
T Consensus 846 --------------------~~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~--- 902 (3956)
T PRK12467 846 --------------------LNPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRA--- 902 (3956)
T ss_pred --------------------CCCCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcC---
Confidence 1246789999999975 33444 299999999873
Q ss_pred CCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 435 KAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 435 ~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
...+.|+||.+++++++|+++...+|+.++.+
T Consensus 903 -dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 903 -DGVIEYLGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred -CCcEEEeccccCeEEECCEecCHHHHHHHHHh
Confidence 45799999999999999999999999999976
No 62
>PRK13383 acyl-CoA synthetase; Provisional
Probab=98.95 E-value=1.1e-07 Score=106.54 Aligned_cols=128 Identities=16% Similarity=0.080 Sum_probs=82.9
Q ss_pred eEEEEcCCccc---hHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTMSQ---YIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~~~---y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++||... .+..+.+.+ +++++ +.||+||+.......+.. .+...+. ..|+ .-+++++.+
T Consensus 294 lr~i~~gG~~l~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~------- 362 (516)
T PRK13383 294 LRVVMSSGDRLDPTLGQRFMDTY-GDILY-NGYGSTEVGIGALATPADLRDAPETVGK-PVAG-CPVRILDRN------- 362 (516)
T ss_pred eEEEEECCCCCCHHHHHHHHHHc-Cchhh-hcccccccccceeccccccccCCCcccC-CCCC-cEEEEECCC-------
Confidence 66777777533 345556667 67887 999999985432111110 0011111 1122 123333321
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceE----------eeeeCCEEEEecccCCCCEEEEeeecCc
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY----------RYRVGDVLRVAGFKNKAPQFNFICRKNV 447 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy----------RYr~GDvv~v~gf~~~~P~~~f~gR~~~ 447 (628)
...+..|+.+||+|++ ..|++ .|+|||+.++.. .-.+.|+||.++
T Consensus 363 ------------------~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~ 420 (516)
T PRK13383 363 ------------------NRPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDD 420 (516)
T ss_pred ------------------CCCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccc
Confidence 1135678899999986 33444 467999999873 347899999999
Q ss_pred eEeccceeccHHHHHHHHHH
Q 006862 448 VLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 448 ~l~i~gek~~e~~v~~av~~ 467 (628)
++++.|++++..+|+.++..
T Consensus 421 ~i~~~G~~v~~~eiE~~l~~ 440 (516)
T PRK13383 421 MIISGGENVYPRAVENALAA 440 (516)
T ss_pred eEEECCEEECHHHHHHHHHh
Confidence 99999999999999999965
No 63
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.94 E-value=1.3e-07 Score=107.35 Aligned_cols=130 Identities=16% Similarity=0.165 Sum_probs=84.3
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCC---CCCCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNP---LCKPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~---~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++|+. ......+++.+ +++++ +.||+||+........ ...+...+ ...|+.. .+.++++..
T Consensus 325 lr~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~~~~-~~i~~~~~~----- 395 (563)
T PRK06710 325 IRACISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPGSIG-VPWPDTE-AMIMSLETG----- 395 (563)
T ss_pred hhheeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCCccC-CCCCCCe-EEEEECCCC-----
Confidence 555666663 23345566666 68888 9999999843211110 00111112 2233332 334443221
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe-------------eeeCCEEEEecccCCCCEEEEeee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
..+..|+.+||+|++ ..|+|. |+|||++..+. ...+.|+||
T Consensus 396 -------------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR 452 (563)
T PRK06710 396 -------------------EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDR 452 (563)
T ss_pred -------------------ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeec
Confidence 135678899999986 345553 99999998873 457999999
Q ss_pred cCceEeccceeccHHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.+++++++|+++++.+|++++...
T Consensus 453 ~dd~i~~~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 453 KKDMIVASGFNVYPREVEEVLYEH 476 (563)
T ss_pred cccEEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999999763
No 64
>PRK13382 acyl-CoA synthetase; Provisional
Probab=98.93 E-value=2.8e-07 Score=104.16 Aligned_cols=128 Identities=12% Similarity=0.119 Sum_probs=83.4
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++||. ...+..+++.+ +.+++ ++||+||+.......+.. .+...+. ..++ .-++.++.+
T Consensus 314 lr~i~~gG~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~~-~~~~i~d~~------- 382 (537)
T PRK13382 314 LRFAAASGSRMRPDVVIAFMDQF-GDVIY-NNYNATEAGMIATATPADLRAAPDTAGR-PAEG-TEIRILDQD------- 382 (537)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHc-CCcEE-ecccccccCcceecChhHhccCCCCccc-cCcC-cEEEEECCC-------
Confidence 566676663 33455666777 56777 999999985432111100 0111111 1122 223344322
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEeec---cce----------EeeeeCCEEEEecccCCCCEEEEeeecCc
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY---AGL----------YRYRVGDVLRVAGFKNKAPQFNFICRKNV 447 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~---~GL----------yRYr~GDvv~v~gf~~~~P~~~f~gR~~~ 447 (628)
..++..|+.+||+|++. .|+ -.|+|||+++... .-.+.|+||.++
T Consensus 383 ------------------~~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd 440 (537)
T PRK13382 383 ------------------FREVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDE 440 (537)
T ss_pred ------------------CCCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEeccccc
Confidence 12456799999999863 232 1589999999873 346899999999
Q ss_pred eEeccceeccHHHHHHHHHH
Q 006862 448 VLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 448 ~l~i~gek~~e~~v~~av~~ 467 (628)
++++.|++++..+|+.++.+
T Consensus 441 ~ik~~G~~v~~~eIE~~l~~ 460 (537)
T PRK13382 441 MIVSGGENVYPIEVEKTLAT 460 (537)
T ss_pred eeEECCEEECHHHHHHHHHh
Confidence 99999999999999999976
No 65
>PLN03051 acyl-activating enzyme; Provisional
Probab=98.93 E-value=1.4e-07 Score=105.85 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=39.7
Q ss_pred eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 420 RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 420 RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.|+|||++++.. .-.+.|+||.++++++.|++++..||+++|.+
T Consensus 358 ~~~TGDlg~~d~----dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 358 LRRHGDIMKRTP----GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred eeecCCeEEECC----CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 389999999873 34799999999999999999999999999975
No 66
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=98.93 E-value=7.8e-08 Score=108.89 Aligned_cols=129 Identities=17% Similarity=0.234 Sum_probs=82.8
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCCC---CCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK---PSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~---p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++|+. ....+.++..+ |++++ +.||+||+...+...+... +...+. ..++ .-...++.+
T Consensus 331 lr~v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~------- 399 (560)
T PRK08751 331 LKMTLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGL-PIPS-TDACIKDDA------- 399 (560)
T ss_pred heeeeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCc-cCCC-ceEEEECCC-------
Confidence 556666663 23345566666 68888 8999999854432221100 011111 1111 112222211
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEeec---cceEe--------------eeeCCEEEEecccCCCCEEEEee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY---AGLYR--------------YRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~---~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~g 443 (628)
...+..|+.+||+|++. .|+|. |+|||+++++. .-.+.|+|
T Consensus 400 ------------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~G 457 (560)
T PRK08751 400 ------------------GTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVD 457 (560)
T ss_pred ------------------CCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEe
Confidence 11356788999999763 34442 89999999873 45899999
Q ss_pred ecCceEeccceeccHHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~a 468 (628)
|.++++++.|+++...+|++++.+.
T Consensus 458 R~~d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 458 RKKDMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred echhheeECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999999763
No 67
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.93 E-value=2.3e-07 Score=104.73 Aligned_cols=64 Identities=9% Similarity=0.048 Sum_probs=53.5
Q ss_pred ccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNA 464 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~a 464 (628)
.+..|+.+||+|+. ..|+| .|+|||++++.. ...+.|+||.++++++.|++++..+|+.+
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 45678999999975 23444 399999999873 34799999999999999999999999999
Q ss_pred HHHH
Q 006862 465 VKNA 468 (628)
Q Consensus 465 v~~a 468 (628)
|...
T Consensus 456 l~~~ 459 (545)
T PRK07768 456 AARV 459 (545)
T ss_pred HHhC
Confidence 9774
No 68
>PRK08315 AMP-binding domain protein; Validated
Probab=98.93 E-value=2.8e-07 Score=104.08 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=82.1
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCCC-----CCCCceeecCCceEEEEEeCCCCCCC
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK-----PSEVSYTLVPTMAYFEFLPVHRNNGV 378 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~-----p~~~~~~l~~~~~~fEFip~~~~~~~ 378 (628)
+++++.|+.. .-.+.+.+.++..+++ +.||+||+...+....... +...+.. .|+ .-++.++.++
T Consensus 317 lr~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p-~~~-~~v~i~d~~~---- 389 (559)
T PRK08315 317 LRTGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGRA-LPH-LEVKIVDPET---- 389 (559)
T ss_pred hheeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCcc-CCC-cEEEEEcCcc----
Confidence 5665555532 2244555667555677 9999999854322111100 1112221 222 2233333321
Q ss_pred cccCCCCccccccccceeeeccccCCCceEEEEEeec---cceE--------------eeeeCCEEEEecccCCCCEEEE
Q 006862 379 ANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY---AGLY--------------RYRVGDVLRVAGFKNKAPQFNF 441 (628)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~---~GLy--------------RYr~GDvv~v~gf~~~~P~~~f 441 (628)
...+..|+.+||+|... .|+| .|+|||+++... .-.+.|
T Consensus 390 --------------------~~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~ 445 (559)
T PRK08315 390 --------------------GETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNI 445 (559)
T ss_pred --------------------CCcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEE
Confidence 11355788999999752 3433 499999999863 347899
Q ss_pred eeecCceEeccceeccHHHHHHHHHH
Q 006862 442 ICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 442 ~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
+||.++++++.|++++..+|++++..
T Consensus 446 ~GR~d~~i~~~G~~v~~~eIE~~l~~ 471 (559)
T PRK08315 446 VGRIKDMIIRGGENIYPREIEEFLYT 471 (559)
T ss_pred EeeccceEEECCEEEcHHHHHHHHHh
Confidence 99999999999999999999999975
No 69
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=98.93 E-value=2.6e-07 Score=104.89 Aligned_cols=129 Identities=16% Similarity=0.239 Sum_probs=82.7
Q ss_pred eeEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 306 YVDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 306 ~i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
.++.+++|+.. ..+..++..+ +++++ ..||+||+.......+.. .+...+.. .|+. =++.++++
T Consensus 334 ~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p-~~~~-~v~ivd~~------ 403 (562)
T PRK12492 334 ALKLTNSGGTALVKATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGIP-VPGT-ALKVIDDD------ 403 (562)
T ss_pred ceeEEEeccccCCHHHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCcccee-cCCC-EEEEECCC------
Confidence 35667777742 2234555556 78998 999999974321111110 01112221 1221 12333221
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEe
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~ 442 (628)
...+..|+.+||+|++ ..|+| .|+|||++++.. .-.+.|+
T Consensus 404 -------------------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~ 460 (562)
T PRK12492 404 -------------------GNELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIV 460 (562)
T ss_pred -------------------CCCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEe
Confidence 1135678899999986 33444 299999999973 3479999
Q ss_pred eecCceEeccceeccHHHHHHHHHH
Q 006862 443 CRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 443 gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
||.++++++.|+++...+|+.++..
T Consensus 461 GR~~~~i~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 461 DRKKDLIIVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred cccCCeEEECCEEECHHHHHHHHHh
Confidence 9999999999999999999999965
No 70
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=98.92 E-value=1.1e-07 Score=111.38 Aligned_cols=132 Identities=15% Similarity=0.234 Sum_probs=81.5
Q ss_pred eEEEEcCCccchH---HHHHhhcCCCceeccccccccccccccCCCCCC--CCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTMSQYI---PILDYYSNGLPLVCTMYASSECYFGVNLNPLCK--PSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~~~y~---~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~--p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++.+++||...-. ..++..+ |++++ .+||.||+..++....... +...+- .+|+ .-...+++++.+
T Consensus 422 lr~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~-p~p~-~evkivd~~~~~----- 492 (696)
T PLN02387 422 IRFMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVGP-PLPC-CYVKLVSWEEGG----- 492 (696)
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccCC-CCCc-eEEEEeeccccC-----
Confidence 6778888853322 2233345 78998 9999999854432211111 111111 1222 233444432211
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceE------------------eeeeCCEEEEecccCCCCEEE
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY------------------RYRVGDVLRVAGFKNKAPQFN 440 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy------------------RYr~GDvv~v~gf~~~~P~~~ 440 (628)
..+. -+++..+||+|.. +.|+| -|+|||+.++.. ...+.
T Consensus 493 -------------~~~~---~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~ 552 (696)
T PLN02387 493 -------------YLIS---DKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLE 552 (696)
T ss_pred -------------cccC---CCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEE
Confidence 0110 0233457999964 56666 489999999973 45799
Q ss_pred EeeecCceEec-cceeccHHHHHHHHHH
Q 006862 441 FICRKNVVLSI-DSDKTDEVELQNAVKN 467 (628)
Q Consensus 441 f~gR~~~~l~i-~gek~~e~~v~~av~~ 467 (628)
|+||.++++++ .||++++.+|++++.+
T Consensus 553 i~gR~kd~ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 553 IIDRKKDIVKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred EEEcccceEECCCCeEEchHHHHHHHhc
Confidence 99999999998 5999999999999865
No 71
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.92 E-value=2e-08 Score=125.80 Aligned_cols=43 Identities=19% Similarity=0.233 Sum_probs=39.5
Q ss_pred eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 421 YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 421 Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|||||++++.. .-.+.|+||.+++++++|+++...+|+.+|.+
T Consensus 680 y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~ 722 (1389)
T TIGR03443 680 YRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQ 722 (1389)
T ss_pred eecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHh
Confidence 99999999873 35799999999999999999999999999976
No 72
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.92 E-value=2.7e-08 Score=123.66 Aligned_cols=64 Identities=25% Similarity=0.345 Sum_probs=53.9
Q ss_pred ccCCCceEEEEEee---ccceE--------------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceecc
Q 006862 401 DVKLGQEYELVVTT---YAGLY--------------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTD 457 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy--------------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~ 457 (628)
.+..|..+||+|+. ..|++ -|||||++++.. ...+.|+||.+++++++|+++.
T Consensus 796 ~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----~G~l~~~GR~d~~ik~~G~ri~ 871 (1296)
T PRK10252 796 PVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD----DGAVEYLGRSDDQLKIRGQRIE 871 (1296)
T ss_pred CCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC----CCcEEEecccCCeEEEeeEEec
Confidence 46689999999986 23433 299999999973 3579999999999999999999
Q ss_pred HHHHHHHHHHH
Q 006862 458 EVELQNAVKNA 468 (628)
Q Consensus 458 e~~v~~av~~a 468 (628)
..+|+.+|.+.
T Consensus 872 ~~eIE~~l~~~ 882 (1296)
T PRK10252 872 LGEIDRAMQAL 882 (1296)
T ss_pred HHHHHHHHHhC
Confidence 99999999763
No 73
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=98.92 E-value=2.3e-08 Score=116.35 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=51.3
Q ss_pred CCCceEEEEEee---ccceEe-------------eeeCCEEEEecccCCCCEEEEeeecCceEec-cceeccHHHHHHHH
Q 006862 403 KLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSI-DSDKTDEVELQNAV 465 (628)
Q Consensus 403 e~G~~YeLVvTt---~~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i-~gek~~e~~v~~av 465 (628)
..|..+||+|.. +.|+|. |+|||+++++. .-.+.|+||.+|++++ .|+++++.+|++++
T Consensus 461 ~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l 536 (660)
T PLN02861 461 SDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIFKLSQGEYVAVENLENTY 536 (660)
T ss_pred CCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccceEcCCCeEEcHHHHHHHH
Confidence 345578999964 678774 99999999983 4579999999999997 79999999999999
Q ss_pred HH
Q 006862 466 KN 467 (628)
Q Consensus 466 ~~ 467 (628)
.+
T Consensus 537 ~~ 538 (660)
T PLN02861 537 SR 538 (660)
T ss_pred hc
Confidence 65
No 74
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=98.91 E-value=2e-07 Score=105.22 Aligned_cols=63 Identities=17% Similarity=0.315 Sum_probs=53.2
Q ss_pred ccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQN 463 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~ 463 (628)
.+..|+.+||+|+. ..|+| -|+|||+.+.+. .-.+.|+||.+++++++|++++..+|+.
T Consensus 374 ~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~~d~i~~~G~~v~~~eiE~ 449 (536)
T PRK10946 374 PLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGREKDQINRGGEKIAAEEIEN 449 (536)
T ss_pred CCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEeccccceeecCCEEEcHHHHHH
Confidence 46689999999975 44555 299999999873 3468999999999999999999999999
Q ss_pred HHHH
Q 006862 464 AVKN 467 (628)
Q Consensus 464 av~~ 467 (628)
+|..
T Consensus 450 ~l~~ 453 (536)
T PRK10946 450 LLLR 453 (536)
T ss_pred HHHh
Confidence 9976
No 75
>PLN02614 long-chain acyl-CoA synthetase
Probab=98.91 E-value=2.5e-08 Score=116.18 Aligned_cols=132 Identities=15% Similarity=0.199 Sum_probs=83.4
Q ss_pred eEEEEcCCc--cchHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTM--SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~--~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++.+++|+. ..-..++...+++++++ ++||.||+..+....+.. .+...+- ..|+.. +-.+++++.+
T Consensus 388 lr~~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~e-vki~d~~~~~----- 459 (666)
T PLN02614 388 VRIILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNVD-IRLESVPEME----- 459 (666)
T ss_pred EEEEEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCceE-EEEeeecccC-----
Confidence 566677774 23234444556678998 999999985322111100 0111222 122211 1222211110
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceEe-------------eeeCCEEEEecccCCCCEEEEeeec
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQFNFICRK 445 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~gR~ 445 (628)
..++.+|+.+||+|.. +.|+|+ |+|||+++++. .-.+.|+||.
T Consensus 460 -----------------~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~ 518 (666)
T PLN02614 460 -----------------YDALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRK 518 (666)
T ss_pred -----------------cccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcc
Confidence 0135678899999965 567774 99999999983 3479999999
Q ss_pred CceEec-cceeccHHHHHHHHHH
Q 006862 446 NVVLSI-DSDKTDEVELQNAVKN 467 (628)
Q Consensus 446 ~~~l~i-~gek~~e~~v~~av~~ 467 (628)
++++++ .|++|++.+|++++..
T Consensus 519 kd~ik~~~G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 519 KNIFKLSQGEYVAVENIENIYGE 541 (666)
T ss_pred hhceecCCCeeecHHHHHHHHhc
Confidence 999997 6999999999999965
No 76
>PRK12316 peptide synthase; Provisional
Probab=98.90 E-value=2.8e-08 Score=137.58 Aligned_cols=130 Identities=16% Similarity=0.155 Sum_probs=83.6
Q ss_pred eEEEEcCCccch---HHHHHhhcCCCceeccccccccccccccCCCCC----CCCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 307 VDVIVTGTMSQY---IPILDYYSNGLPLVCTMYASSECYFGVNLNPLC----KPSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 307 i~~~~~G~~~~y---~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~----~p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
++.++.||.... .+.+...+++++++ +.||.||+.+++...... .+...+.. .++..+ ..++.+
T Consensus 772 l~~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~~~-~i~d~~------ 842 (5163)
T PRK12316 772 LRRIVCSGEALPADAQEQVFAKLPQAGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGRP-IANLAC-YILDAN------ 842 (5163)
T ss_pred ccEEEEeeccCCHHHHHHHHHhCCCCeEE-eCcCcChheeeeeEEecccccCCCCCCccc-cCCCEE-EEECCC------
Confidence 455666664332 33444456788998 999999997543221110 00011111 122221 111111
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE--------------------eeeeCCEEEEecccCCC
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY--------------------RYRVGDVLRVAGFKNKA 436 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy--------------------RYr~GDvv~v~gf~~~~ 436 (628)
...+..|+.+||+|.. ..|++ -|||||+++... .
T Consensus 843 -------------------~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----d 899 (5163)
T PRK12316 843 -------------------LEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRA----D 899 (5163)
T ss_pred -------------------CCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECC----C
Confidence 1246689999999964 33444 399999999973 4
Q ss_pred CEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 437 PQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 437 P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
..+.|+||.+++++++|+++...||+++|.+.
T Consensus 900 G~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~ 931 (5163)
T PRK12316 900 GVIEYAGRIDHQVKLRGLRIELGEIEARLLEH 931 (5163)
T ss_pred CCEEeecccCCEEEEceEEcChHHHHHHHHhC
Confidence 58999999999999999999999999999763
No 77
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.90 E-value=2.4e-07 Score=102.49 Aligned_cols=63 Identities=16% Similarity=0.195 Sum_probs=53.1
Q ss_pred ccCCCceEEEEEeec---cceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHH
Q 006862 401 DVKLGQEYELVVTTY---AGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNA 464 (628)
Q Consensus 401 eve~G~~YeLVvTt~---~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~a 464 (628)
++..|+.+||+|++. .|++ .|+|||++++.. ...+.|.||.++++++.|++++..+|+++
T Consensus 326 ~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~l~~~GR~~~~i~~~G~~v~~~~ie~~ 401 (483)
T PRK03640 326 VVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE----EGFLYVLDRRSDLIISGGENIYPAEIEEV 401 (483)
T ss_pred cCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC----CCCEEEeecccCeEEeCCEEECHHHHHHH
Confidence 366799999999873 3433 489999999874 34699999999999999999999999999
Q ss_pred HHH
Q 006862 465 VKN 467 (628)
Q Consensus 465 v~~ 467 (628)
+..
T Consensus 402 i~~ 404 (483)
T PRK03640 402 LLS 404 (483)
T ss_pred HHh
Confidence 965
No 78
>PRK06188 acyl-CoA synthetase; Validated
Probab=98.90 E-value=5e-07 Score=101.36 Aligned_cols=63 Identities=19% Similarity=0.264 Sum_probs=53.1
Q ss_pred ccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNA 464 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~a 464 (628)
++..|+.+||+|++ ..|+| .|+|||+.+... ...+.|.||.++++++.|++++..+|+++
T Consensus 359 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~i~~~G~~i~~~~IE~~ 434 (524)
T PRK06188 359 EVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYIVDRKKDMIVTGGFNVFPREVEDV 434 (524)
T ss_pred CCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEEEeccccceecCCEEECHHHHHHH
Confidence 46689999999987 33444 499999999873 34789999999999999999999999999
Q ss_pred HHH
Q 006862 465 VKN 467 (628)
Q Consensus 465 v~~ 467 (628)
+..
T Consensus 435 l~~ 437 (524)
T PRK06188 435 LAE 437 (524)
T ss_pred HHh
Confidence 865
No 79
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=98.88 E-value=8.1e-07 Score=99.32 Aligned_cols=128 Identities=13% Similarity=0.087 Sum_probs=84.2
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCC---CCCCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNP---LCKPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~---~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++|+. ...++.+++.+ +++++ ++||+||+....-..+ ...|...++ ..|+. -++.++.+
T Consensus 273 l~~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~d~~------- 341 (509)
T PRK12406 273 LRHVIHAAAPCPADVKRAMIEWW-GPVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPGA-ELRFVDED------- 341 (509)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHc-CCcEE-eeccccccCceEecCcccccccCCCcCc-cCCCc-EEEEECCC-------
Confidence 666776663 34456666767 67887 9999999853211110 011122222 22332 23333322
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEeecc----ceE-------------eeeeCCEEEEecccCCCCEEEEee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTTYA----GLY-------------RYRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~~----GLy-------------RYr~GDvv~v~gf~~~~P~~~f~g 443 (628)
...+..|+.+||+++... |++ -|+|||++++.. .-.+.|+|
T Consensus 342 ------------------~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~G 399 (509)
T PRK12406 342 ------------------GRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCD 399 (509)
T ss_pred ------------------CCCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEee
Confidence 124668999999997632 444 288999999873 34789999
Q ss_pred ecCceEeccceeccHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|.+++++++|++++..+|+++|..
T Consensus 400 R~~d~ik~~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 400 RKRDMVISGGVNIYPAEIEAVLHA 423 (509)
T ss_pred cccceEEECCEEECHHHHHHHHHh
Confidence 999999999999999999999975
No 80
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=98.87 E-value=2e-07 Score=105.31 Aligned_cols=63 Identities=19% Similarity=0.272 Sum_probs=51.8
Q ss_pred ccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQN 463 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~ 463 (628)
++..|+.+||+|.+ ..|+| -|+|||++++.. ...+.|+||.+++++++|++++..+|++
T Consensus 375 ~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~v~p~~iE~ 450 (547)
T PRK06087 375 TLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGRKKDIIVRGGENISSREVED 450 (547)
T ss_pred CCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEecchhhhhcCCEEECHHHHHH
Confidence 45678899999854 23332 289999999873 4578999999999999999999999999
Q ss_pred HHHH
Q 006862 464 AVKN 467 (628)
Q Consensus 464 av~~ 467 (628)
+|..
T Consensus 451 ~l~~ 454 (547)
T PRK06087 451 ILLQ 454 (547)
T ss_pred HHHh
Confidence 9975
No 81
>PRK12467 peptide synthase; Provisional
Probab=98.86 E-value=6.5e-08 Score=131.74 Aligned_cols=130 Identities=18% Similarity=0.209 Sum_probs=84.7
Q ss_pred eEEEEcCCccc---hHHHHHhhcCCCceeccccccccccccccCCCCCCCC-------CCceeecCCceEEEEEeCCCCC
Q 006862 307 VDVIVTGTMSQ---YIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPS-------EVSYTLVPTMAYFEFLPVHRNN 376 (628)
Q Consensus 307 i~~~~~G~~~~---y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p~-------~~~~~l~~~~~~fEFip~~~~~ 376 (628)
++.+++||.+. -...+...++++.++ +.||.||+.+.+...+..... ..+. .+++...+ | .++.
T Consensus 3353 lr~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~--v-~d~~- 3426 (3956)
T PRK12467 3353 LDIYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGR-PVAGRSIY--V-LDGQ- 3426 (3956)
T ss_pred ceEEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCcc-ccCCCEEE--E-ECCC-
Confidence 56667777432 234455557778888 999999996654322110000 0011 11121110 0 1110
Q ss_pred CCcccCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe---------------------eeeCCEEEEecc
Q 006862 377 GVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR---------------------YRVGDVLRVAGF 432 (628)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR---------------------Yr~GDvv~v~gf 432 (628)
...|.+|+.+||+|.. ..|+|. |||||++++..
T Consensus 3427 ----------------------~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~- 3483 (3956)
T PRK12467 3427 ----------------------LNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA- 3483 (3956)
T ss_pred ----------------------CCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC-
Confidence 2246789999999975 345542 99999999873
Q ss_pred cCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 433 KNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 433 ~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
...+.|+||.+++++++|.++...||+.++.+.
T Consensus 3484 ---dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~ 3516 (3956)
T PRK12467 3484 ---DGVIEYLGRIDHQVKIRGFRIELGEIEARLLQH 3516 (3956)
T ss_pred ---CCcEEEeccccceEeeceEeecHHHHHHHHhhC
Confidence 458999999999999999999999999999763
No 82
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.86 E-value=2.6e-07 Score=106.55 Aligned_cols=64 Identities=19% Similarity=0.179 Sum_probs=53.7
Q ss_pred cccCCCceEEEEEee---ccceE-------------------------------eeeeCCEEEEecccCCCCEEEEeeec
Q 006862 400 VDVKLGQEYELVVTT---YAGLY-------------------------------RYRVGDVLRVAGFKNKAPQFNFICRK 445 (628)
Q Consensus 400 ~eve~G~~YeLVvTt---~~GLy-------------------------------RYr~GDvv~v~gf~~~~P~~~f~gR~ 445 (628)
.++..|+.+||+|.. ..|+| -|||||+.++. .-.+.|+||.
T Consensus 411 ~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~ 485 (631)
T PRK07769 411 SELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRV 485 (631)
T ss_pred cCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEccc
Confidence 357789999999975 34443 38999999875 2479999999
Q ss_pred CceEeccceeccHHHHHHHHHHH
Q 006862 446 NVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 446 ~~~l~i~gek~~e~~v~~av~~a 468 (628)
++++++.|+++++.||+.+|...
T Consensus 486 ~d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 486 KDLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred ccEEEECCeeeCHHHHHHHHHhc
Confidence 99999999999999999999763
No 83
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.85 E-value=6.6e-07 Score=99.74 Aligned_cols=129 Identities=15% Similarity=0.056 Sum_probs=82.4
Q ss_pred ceeEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCCC---CCCCCceeecCCceEEEEEeCCCCCCC
Q 006862 305 KYVDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLC---KPSEVSYTLVPTMAYFEFLPVHRNNGV 378 (628)
Q Consensus 305 ~~i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~---~p~~~~~~l~~~~~~fEFip~~~~~~~ 378 (628)
..+++++.|+. ...++.+++.+ +.+++ ..||+||+....-....+ .+...+..+ .+-++.++.+
T Consensus 262 ~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d~~----- 331 (502)
T PRK08276 262 SSLRVAIHAAAPCPVEVKRAMIDWW-GPIIH-EYYASSEGGGVTVITSEDWLAHPGSVGKAV---LGEVRILDED----- 331 (502)
T ss_pred ccceEEEecCCCCCHHHHHHHHHHh-CcHhh-hhcccccccceeEecCccccccCCCcceec---ccEEEEECCC-----
Confidence 34677777774 23345566666 56676 899999984311111111 011122222 1123333211
Q ss_pred cccCCCCccccccccceeeeccccCCCceEEEEEeec---cceE--------------eeeeCCEEEEecccCCCCEEEE
Q 006862 379 ANSISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY---AGLY--------------RYRVGDVLRVAGFKNKAPQFNF 441 (628)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~---~GLy--------------RYr~GDvv~v~gf~~~~P~~~f 441 (628)
...+..|+.+||+|++. .|+| .|+|||++++.. .-.+.+
T Consensus 332 --------------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~ 387 (502)
T PRK08276 332 --------------------GNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYL 387 (502)
T ss_pred --------------------CCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEE
Confidence 11356788999999942 2332 478999999873 347999
Q ss_pred eeecCceEeccceeccHHHHHHHHHH
Q 006862 442 ICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 442 ~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
+||.+++++++|++++..+|+.++.+
T Consensus 388 ~GR~~~~i~~~G~~v~~~~iE~~i~~ 413 (502)
T PRK08276 388 TDRKSDMIISGGVNIYPQEIENLLVT 413 (502)
T ss_pred eccCcceEEeCCEEeCHHHHHHHHHh
Confidence 99999999999999999999999975
No 84
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=98.85 E-value=3.4e-07 Score=107.47 Aligned_cols=45 Identities=13% Similarity=0.166 Sum_probs=39.8
Q ss_pred eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 420 RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 420 RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.|+|||+.++.. ...+.|+||.++++++.|+++++.+|+.++...
T Consensus 592 w~~TGDlg~~d~----dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 592 WYDTGDIVRFDE----QGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred eEecCCEEEEcC----CCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 389999999873 447899999999999999999999999998663
No 85
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=98.84 E-value=8e-08 Score=108.30 Aligned_cols=62 Identities=11% Similarity=0.170 Sum_probs=53.0
Q ss_pred cCCCceEEEEEee---ccceEe---------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 402 VKLGQEYELVVTT---YAGLYR---------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 402 ve~G~~YeLVvTt---~~GLyR---------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
|..|+.+||+|+. ..|+|. |+|||++++. + -.+.|+||.++++++.|++++..+|+++|...
T Consensus 367 ~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~---~--G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 367 VAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV---D--GGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred CCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE---C--CEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 6789999999975 346653 9999999875 2 37999999999999999999999999999774
No 86
>PRK05857 acyl-CoA synthetase; Validated
Probab=98.84 E-value=4.8e-07 Score=102.37 Aligned_cols=63 Identities=13% Similarity=0.084 Sum_probs=53.2
Q ss_pred ccCCCceEEEEEeec---cceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHH
Q 006862 401 DVKLGQEYELVVTTY---AGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNA 464 (628)
Q Consensus 401 eve~G~~YeLVvTt~---~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~a 464 (628)
++..|+.+||+|+.. .|+| .|+|||++++.. ...+.|+||.++++++.|++++..+|+.+
T Consensus 368 ~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~----~g~l~~~GR~~~~ik~~G~~v~p~eIE~~ 443 (540)
T PRK05857 368 AGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERRE----DGFFYIKGRSSEMIICGGVNIAPDEVDRI 443 (540)
T ss_pred cCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcC----CceEEEeccccccEecCCEEECHHHHHHH
Confidence 456788999999873 4555 399999999862 45799999999999999999999999999
Q ss_pred HHH
Q 006862 465 VKN 467 (628)
Q Consensus 465 v~~ 467 (628)
+..
T Consensus 444 l~~ 446 (540)
T PRK05857 444 AEG 446 (540)
T ss_pred HHh
Confidence 965
No 87
>PLN03052 acetate--CoA ligase; Provisional
Probab=98.84 E-value=6e-07 Score=105.81 Aligned_cols=44 Identities=16% Similarity=0.257 Sum_probs=39.4
Q ss_pred eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 420 RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 420 RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
-|++||+++++. .-.+.|+||.+++|++.|+++...||+++|..
T Consensus 590 ~~~tGDl~~~d~----dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 590 LRRHGDIFERTS----GGYYRAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred EEecCceEEECC----CCeEEEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 389999999973 34799999999999999999999999999864
No 88
>PRK08308 acyl-CoA synthetase; Validated
Probab=98.82 E-value=4.4e-07 Score=98.99 Aligned_cols=58 Identities=14% Similarity=0.139 Sum_probs=50.1
Q ss_pred CCceEEEEEeeccceEeeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 404 LGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 404 ~G~~YeLVvTt~~GLyRYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
.|+.+|+++++..| +|+|||+++... .-.+.|+||.++++++.|+++++.+|++++.+
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 335 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLR 335 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 36678999998766 578999999873 34789999999999999999999999999976
No 89
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=98.82 E-value=6.9e-07 Score=97.39 Aligned_cols=58 Identities=14% Similarity=0.256 Sum_probs=49.5
Q ss_pred ceEEEEEeec---cceEe-------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 406 QEYELVVTTY---AGLYR-------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 406 ~~YeLVvTt~---~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
+.+||+|++. .|+|+ |+|||++++.+ ...+.|+||.+|++++.|++++..+|++++..
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 5679999873 44443 99999999984 45799999999999999999999999999975
No 90
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=98.81 E-value=1.4e-07 Score=107.96 Aligned_cols=64 Identities=22% Similarity=0.370 Sum_probs=51.3
Q ss_pred cccCCCceEEEEEe-----eccceE-------------------eeeeCCEEEEecccCCCCEEEEeeecCceEecccee
Q 006862 400 VDVKLGQEYELVVT-----TYAGLY-------------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDK 455 (628)
Q Consensus 400 ~eve~G~~YeLVvT-----t~~GLy-------------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek 455 (628)
.++..|+.+||++. .+.|+. -|+|||++++.. .-.+.|+||.+++++++|++
T Consensus 396 ~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~~~GR~~d~ik~~G~~ 471 (600)
T PRK08279 396 IKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQFVDRLGDTFRWKGEN 471 (600)
T ss_pred ccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEEEecccCCeEEECCcc
Confidence 35778899999842 123321 289999999883 34799999999999999999
Q ss_pred ccHHHHHHHHHH
Q 006862 456 TDEVELQNAVKN 467 (628)
Q Consensus 456 ~~e~~v~~av~~ 467 (628)
++..+|++++.+
T Consensus 472 i~p~eIE~~l~~ 483 (600)
T PRK08279 472 VATTEVENALSG 483 (600)
T ss_pred cCHHHHHHHHhc
Confidence 999999999976
No 91
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=98.81 E-value=9.5e-07 Score=98.73 Aligned_cols=62 Identities=18% Similarity=0.266 Sum_probs=52.0
Q ss_pred cCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHH
Q 006862 402 VKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAV 465 (628)
Q Consensus 402 ve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av 465 (628)
+..|+.+||+|+. ..|+| .|+|||+.+... .-.+.|+||.++++++.|++++..+|++++
T Consensus 351 ~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l 426 (508)
T TIGR02262 351 VAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTDDMLKVSGIYVSPFEIESAL 426 (508)
T ss_pred CCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccccceeeeCCEEECHHHHHHHH
Confidence 5678899999986 34443 479999988862 347899999999999999999999999999
Q ss_pred HH
Q 006862 466 KN 467 (628)
Q Consensus 466 ~~ 467 (628)
.+
T Consensus 427 ~~ 428 (508)
T TIGR02262 427 IQ 428 (508)
T ss_pred Hh
Confidence 76
No 92
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.80 E-value=1.1e-07 Score=107.83 Aligned_cols=130 Identities=15% Similarity=0.225 Sum_probs=85.4
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCCC----CCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK----PSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~----p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
++++++|+.. ...+++++.++..+++ .+||.||+...+...+... +...+. ..|+ .-...++.+.
T Consensus 293 lr~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~pg-~~v~Ivd~~~----- 364 (534)
T COG0318 293 LRLVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPDDLLAKPGSVGR-PLPG-VEVRIVDPDG----- 364 (534)
T ss_pred eEEEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCchhhhcCCcccc-cCCC-cEEEEEeCCC-----
Confidence 7889988863 4456666778656788 9999999964332222111 111111 1111 1111122111
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEe
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~ 442 (628)
. ++.+|+.+||+|-. ..|+|+ |+|||+.++.. ...+.|+
T Consensus 365 --------------~------~~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~ 420 (534)
T COG0318 365 --------------G------EVLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIV 420 (534)
T ss_pred --------------C------ccCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEE
Confidence 0 12338889999953 456552 89999998874 3579999
Q ss_pred eecCceEeccceeccHHHHHHHHHHH
Q 006862 443 CRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 443 gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
||.+|+++..||++++.+|+.++.+.
T Consensus 421 gR~kd~I~~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 421 GRLKDLIISGGENIYPEEIEAVLAEH 446 (534)
T ss_pred eccceEEEeCCeEECHHHHHHHHHhC
Confidence 99999999999999999999999874
No 93
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=98.80 E-value=3.7e-07 Score=107.75 Aligned_cols=130 Identities=12% Similarity=0.226 Sum_probs=80.1
Q ss_pred eEEEEcCCccch---HHHHHhhcCCCceeccccccccccccccCCCC--CCCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 307 VDVIVTGTMSQY---IPILDYYSNGLPLVCTMYASSECYFGVNLNPL--CKPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 307 i~~~~~G~~~~y---~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~--~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
++.+++||...- .+.++..+ |++++ .+||.||+...+...+. ..+...+-.+.|.. -+..++.++..
T Consensus 463 lr~~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg~-e~ki~d~~~~~----- 534 (746)
T PTZ00342 463 LEVILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPNT-KYKVRTWETYK----- 534 (746)
T ss_pred eEEEEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCCcE-EEEEecccccc-----
Confidence 677788875432 23344445 78998 99999998432221111 01111222222221 11222211100
Q ss_pred CCCCccccccccceeeeccccCCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEeee
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
....+..+||+|.. +.|+|+ |+|||++++.. ...+.|+||
T Consensus 535 -------------------~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~gR 591 (746)
T PTZ00342 535 -------------------ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFLDR 591 (746)
T ss_pred -------------------cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEEcc
Confidence 11223457999954 567773 99999999973 458999999
Q ss_pred cCceEec-cceeccHHHHHHHHHH
Q 006862 445 KNVVLSI-DSDKTDEVELQNAVKN 467 (628)
Q Consensus 445 ~~~~l~i-~gek~~e~~v~~av~~ 467 (628)
.++++++ .||++.+.+|++++..
T Consensus 592 ~kdlIkls~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 592 SKGLVKLSQGEYIETDMLNNLYSQ 615 (746)
T ss_pred CCCeEEeCCCEEEchHHHHHHHhc
Confidence 9999996 6999999999999965
No 94
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.79 E-value=1.8e-06 Score=98.35 Aligned_cols=43 Identities=21% Similarity=0.190 Sum_probs=39.1
Q ss_pred eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 421 YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 421 Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|+|||++++.. ...+.|+||.++++++.|+++...+|++++..
T Consensus 432 ~~TGD~~~~~~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~ 474 (576)
T PRK05620 432 LRTGDVGSVTR----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMA 474 (576)
T ss_pred EecCceEEEcC----CceEEEEechhhhhhcCCEEEcHHHHHHHHhc
Confidence 89999999873 45799999999999999999999999999965
No 95
>PRK06178 acyl-CoA synthetase; Validated
Probab=98.78 E-value=8.9e-07 Score=100.55 Aligned_cols=62 Identities=21% Similarity=0.384 Sum_probs=51.6
Q ss_pred cCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHH
Q 006862 402 VKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAV 465 (628)
Q Consensus 402 ve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av 465 (628)
|..|+.+||+|.+ ..|+| .|+|||++++.+ ...+.|+||.+++++++|++++..+|++++
T Consensus 409 ~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l 484 (567)
T PRK06178 409 LPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFPSEVEALL 484 (567)
T ss_pred CCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECHHHHHHHH
Confidence 5678889999965 23433 399999999873 357999999999999999999999999998
Q ss_pred HH
Q 006862 466 KN 467 (628)
Q Consensus 466 ~~ 467 (628)
.+
T Consensus 485 ~~ 486 (567)
T PRK06178 485 GQ 486 (567)
T ss_pred Hh
Confidence 65
No 96
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.78 E-value=2.3e-06 Score=91.44 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=39.5
Q ss_pred eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 420 RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 420 RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
+|+|||++++. ...+.|+||.++++++.|++++..+|+.++.+.
T Consensus 235 ~~~TGDl~~~~-----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGALD-----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEEe-----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 79999999983 347899999999999999999999999999763
No 97
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=98.77 E-value=1.2e-06 Score=97.94 Aligned_cols=63 Identities=21% Similarity=0.295 Sum_probs=51.9
Q ss_pred ccCCCceEEEEEeec------cceE--------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHH
Q 006862 401 DVKLGQEYELVVTTY------AGLY--------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVE 460 (628)
Q Consensus 401 eve~G~~YeLVvTt~------~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~ 460 (628)
++..|+.+||+|+.. .|+| -|+|||+.++.. ...+.|+||.++++++.|++++..+
T Consensus 360 ~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~i~p~~ 435 (517)
T PRK08008 360 PLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDRRCNMIKRGGENVSCVE 435 (517)
T ss_pred CCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeecccceEEeCCEEECHHH
Confidence 456789999999842 2333 289999988873 4579999999999999999999999
Q ss_pred HHHHHHH
Q 006862 461 LQNAVKN 467 (628)
Q Consensus 461 v~~av~~ 467 (628)
|+.++..
T Consensus 436 iE~~l~~ 442 (517)
T PRK08008 436 LENIIAT 442 (517)
T ss_pred HHHHHHh
Confidence 9999965
No 98
>PRK05691 peptide synthase; Validated
Probab=98.76 E-value=2.2e-07 Score=127.65 Aligned_cols=130 Identities=15% Similarity=0.158 Sum_probs=84.0
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceeccccccccccccccCCCCCC----CCCCceeecCCceEEEEEeCCCCCCCc
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK----PSEVSYTLVPTMAYFEFLPVHRNNGVA 379 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~----p~~~~~~l~~~~~~fEFip~~~~~~~~ 379 (628)
++.+++||.. ...+.+...+++++++ +.||.||+.+.+....... +...+.. .++.. +..++.+
T Consensus 1390 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~~------ 1460 (4334)
T PRK05691 1390 LRRLFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRP-LGNVL-CRVLDAE------ 1460 (4334)
T ss_pred ccEEEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCcccce-eCCCE-EEEECCC------
Confidence 5566666642 2344555667788998 9999999865432211000 0011111 12221 2222211
Q ss_pred ccCCCCccccccccceeeeccccCCCceEEEEEee---ccceE---------------------eeeeCCEEEEecccCC
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLY---------------------RYRVGDVLRVAGFKNK 435 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLy---------------------RYr~GDvv~v~gf~~~ 435 (628)
...|..|..+||+|.. ..|++ -|||||+++...
T Consensus 1461 -------------------~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~---- 1517 (4334)
T PRK05691 1461 -------------------LNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA---- 1517 (4334)
T ss_pred -------------------CCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC----
Confidence 1246789999999964 22332 399999999873
Q ss_pred CCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 436 APQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 436 ~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
...+.|+||.+++++++|.++...+|+.+|.+.
T Consensus 1518 dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~ 1550 (4334)
T PRK05691 1518 DGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQ 1550 (4334)
T ss_pred CCCEEEecccCcEEEECCEEcCHHHHHHHHHhC
Confidence 458999999999999999999999999999763
No 99
>PRK12316 peptide synthase; Provisional
Probab=98.75 E-value=4.4e-07 Score=126.05 Aligned_cols=130 Identities=21% Similarity=0.245 Sum_probs=86.2
Q ss_pred eEEEEcCCccchHHHHHhhcCCCceeccccccccccccccCCCCCC----CCCCceeecCCceEEEEEeCCCCCCCcccC
Q 006862 307 VDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCK----PSEVSYTLVPTMAYFEFLPVHRNNGVANSI 382 (628)
Q Consensus 307 i~~~~~G~~~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~----p~~~~~~l~~~~~~fEFip~~~~~~~~~~~ 382 (628)
++.++.||.......++.+..+++++ ++||.||+.+......... +...+.. +++.. +..++.+
T Consensus 3313 lr~~~~gGe~l~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~~--------- 3380 (5163)
T PRK12316 3313 LKRIVCGGEALPADLQQQVFAGLPLY-NLYGPTEATITVTHWQCVEEGKDAVPIGRP-IANRA-CYILDGS--------- 3380 (5163)
T ss_pred ceEEEEccccCCHHHHHHHHhCCcEe-eccCCCccEeeEeEEeccCCCCCCCcccee-cCCCE-EEEECCC---------
Confidence 56677777655555666555679988 9999999976543211111 0111111 12221 1112111
Q ss_pred CCCccccccccceeeeccccCCCceEEEEEee---ccceEe--------------------eeeCCEEEEecccCCCCEE
Q 006862 383 SMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------------YRVGDVLRVAGFKNKAPQF 439 (628)
Q Consensus 383 ~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------------Yr~GDvv~v~gf~~~~P~~ 439 (628)
...|..|..+||+|.. ..|++. |||||+++... ...+
T Consensus 3381 ----------------~~~~p~G~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~----dG~l 3440 (5163)
T PRK12316 3381 ----------------LEPVPVGALGELYLGGEGLARGYHNRPGLTAERFVPDPFVPGERLYRTGDLARYRA----DGVI 3440 (5163)
T ss_pred ----------------CCCCCCCCCceEEecccccchhcCCChhhchhhCCCCCCCCCCeeEecCceEEECC----CCCE
Confidence 1246789999999964 344432 99999999872 4589
Q ss_pred EEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 440 NFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 440 ~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
+|+||++++++++|.++...||+.++...
T Consensus 3441 ~~~GR~d~qvKi~G~rIel~eIE~~l~~~ 3469 (5163)
T PRK12316 3441 EYIGRVDHQVKIRGFRIELGEIEARLLEH 3469 (5163)
T ss_pred EEecccCCeEeeCcEeeChHHHHHHHHhC
Confidence 99999999999999999999999999763
No 100
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=98.74 E-value=2.3e-07 Score=107.98 Aligned_cols=61 Identities=18% Similarity=0.310 Sum_probs=50.6
Q ss_pred CCCceEEEEEee---ccceEe-------------eeeCCEEEEecccCCCCEEEEeeecCceEec-cceeccHHHHHHHH
Q 006862 403 KLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSI-DSDKTDEVELQNAV 465 (628)
Q Consensus 403 e~G~~YeLVvTt---~~GLyR-------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i-~gek~~e~~v~~av 465 (628)
..|..+||+|.. +.|+|. |+|||+.++.. .-.+.|+||.++++++ .|+++.+.+|+.++
T Consensus 461 ~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l 536 (660)
T PLN02430 461 GEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKKNLIKLSQGEYVALEYLENVY 536 (660)
T ss_pred CCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEcccccEEcCCCcEEchHHHHHHH
Confidence 345678999975 567773 99999999973 3479999999999997 69999999999988
Q ss_pred HH
Q 006862 466 KN 467 (628)
Q Consensus 466 ~~ 467 (628)
.+
T Consensus 537 ~~ 538 (660)
T PLN02430 537 GQ 538 (660)
T ss_pred hc
Confidence 55
No 101
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.74 E-value=3.7e-06 Score=95.03 Aligned_cols=58 Identities=16% Similarity=0.244 Sum_probs=48.3
Q ss_pred ceEEEEEee---ccceEe----------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 406 QEYELVVTT---YAGLYR----------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 406 ~~YeLVvTt---~~GLyR----------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
+.+||+++. ..|+|. |+|||+++... .-.+.|+||.++++++.|+|++..+|++++..
T Consensus 383 ~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 383 AFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DGFMQITDRSKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred cceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CCcEEEeecccCEEEeCCeEEcHHHHHHHHHh
Confidence 457999986 234442 99999999873 34799999999999999999999999999966
No 102
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=98.74 E-value=2.1e-07 Score=106.43 Aligned_cols=134 Identities=17% Similarity=0.365 Sum_probs=97.6
Q ss_pred eEEEEcCCccchHHHHHhhc-CCCceeccccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCCC
Q 006862 307 VDVIVTGTMSQYIPILDYYS-NGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMP 385 (628)
Q Consensus 307 i~~~~~G~~~~y~~~l~~~~-~g~p~~~~~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~ 385 (628)
++..++||++.-.+.++++. =|+++. .+||.||..-+++.++ |.+ |.+ .
T Consensus 355 i~~~~sGGa~l~~~~~~f~~~lGi~i~-eGYGlTEts~~~~v~~---~~~-------------~~~-g------------ 404 (613)
T COG1022 355 IRYALSGGAPLSPELLHFFRSLGIPIL-EGYGLTETSAVVSVNP---PDR-------------FVL-G------------ 404 (613)
T ss_pred EEEEEecCCcCCHHHHHHHHHcCCCeE-EEecccccccceEEcc---ccC-------------ccc-C------------
Confidence 67778888755445555433 269999 9999999876665443 211 111 1
Q ss_pred ccccccccceeeeccccCCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEeeecCce
Q 006862 386 KSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFICRKNVV 448 (628)
Q Consensus 386 ~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~ 448 (628)
.-+++++..|++.++.+||.|.+ +.|+|. |+|||+..++. .-.+.++||++++
T Consensus 405 ------tvG~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~ 474 (613)
T COG1022 405 ------TVGKPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKEL 474 (613)
T ss_pred ------CcCCcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccce
Confidence 11557777789999999999986 789996 99999999994 3689999999999
Q ss_pred Eec-cceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecC
Q 006862 449 LSI-DSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADT 488 (628)
Q Consensus 449 l~i-~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~ 488 (628)
+.. +||++.++.|+.++.+ .-.|...+++.+.
T Consensus 475 i~l~~GknIaP~~IE~~l~~--------~~~I~qi~vvg~~ 507 (613)
T COG1022 475 IKLSNGKNIAPEPIESKLAK--------SPLIEQICVVGDD 507 (613)
T ss_pred EECCCCcccChHHHHHHHhc--------CCCeeEEEEEecC
Confidence 654 5999999999997754 2235566666654
No 103
>PRK05691 peptide synthase; Validated
Probab=98.73 E-value=6e-07 Score=123.50 Aligned_cols=64 Identities=23% Similarity=0.313 Sum_probs=53.5
Q ss_pred ccCCCceEEEEEee---ccceEe---------------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceec
Q 006862 401 DVKLGQEYELVVTT---YAGLYR---------------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKT 456 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLyR---------------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~ 456 (628)
.|..|..+||+|.. ..|++. |||||+++... ...++|+||.+++++++|.+|
T Consensus 4060 ~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~----dG~l~~~GR~d~qvki~G~ri 4135 (4334)
T PRK05691 4060 LVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS----DGVLEYVGRIDHQVKIRGYRI 4135 (4334)
T ss_pred CCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC----CCcEEEecccCCcEEeceEEe
Confidence 35689999999975 334442 99999999973 347999999999999999999
Q ss_pred cHHHHHHHHHHH
Q 006862 457 DEVELQNAVKNA 468 (628)
Q Consensus 457 ~e~~v~~av~~a 468 (628)
...||++++.+.
T Consensus 4136 el~eIE~~l~~~ 4147 (4334)
T PRK05691 4136 ELGEIEARLHEQ 4147 (4334)
T ss_pred cHHHHHHHHHhC
Confidence 999999998763
No 104
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.70 E-value=2.5e-06 Score=95.21 Aligned_cols=131 Identities=18% Similarity=0.072 Sum_probs=79.7
Q ss_pred eeEEEEcCCcc---chHHHHHhhcCCCceeccccccccccc-cccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCccc
Q 006862 306 YVDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECYF-GVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANS 381 (628)
Q Consensus 306 ~i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~~-gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~ 381 (628)
.++.+++|+.. .....++..+++++++ +.||+||... +......+.....+-...++. -.+.++.+
T Consensus 297 ~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~-------- 366 (533)
T PRK07798 297 SLFAIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIGP-RTVVLDED-------- 366 (533)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCCCc-eEEEECCC--------
Confidence 36777777742 3345556667788888 9999999733 221111111111110112222 23333322
Q ss_pred CCCCccccccccceeeeccccCCCce--EEEEEeec--c-----------------ceEeeeeCCEEEEecccCCCCEEE
Q 006862 382 ISMPKSLNEKERQELVDLVDVKLGQE--YELVVTTY--A-----------------GLYRYRVGDVLRVAGFKNKAPQFN 440 (628)
Q Consensus 382 ~~~~~~~~~~~~~~~v~l~eve~G~~--YeLVvTt~--~-----------------GLyRYr~GDvv~v~gf~~~~P~~~ 440 (628)
.+ .+..|+. ++++.+.. . |-.-|+|||++++.. .-.+.
T Consensus 367 ------------~~-----~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~ 425 (533)
T PRK07798 367 ------------GN-----PVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTIT 425 (533)
T ss_pred ------------CC-----CCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEE
Confidence 11 2445555 67776531 1 222478999999873 34799
Q ss_pred EeeecCceEeccceeccHHHHHHHHHH
Q 006862 441 FICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 441 f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|+||.++++++.|++++..+|++++.+
T Consensus 426 ~~GR~~~~i~~~G~~v~~~eIE~~l~~ 452 (533)
T PRK07798 426 LLGRGSVCINTGGEKVFPEEVEEALKA 452 (533)
T ss_pred EEccccceEecCCEEeCHHHHHHHHHh
Confidence 999999999999999999999999865
No 105
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.69 E-value=1.3e-06 Score=107.53 Aligned_cols=61 Identities=13% Similarity=0.204 Sum_probs=49.9
Q ss_pred CCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHH
Q 006862 404 LGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVK 466 (628)
Q Consensus 404 ~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~ 466 (628)
.|+.+||.|.. ..|+| .|+|||+++++. ...+.|+||.+|++++.|++++..+|++++.
T Consensus 978 ~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~ 1053 (1140)
T PRK06814 978 IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGRAKRFAKIAGEMISLAAVEELAA 1053 (1140)
T ss_pred CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEecccCeeeeCCEEECHHHHHHHHH
Confidence 36678888864 23333 599999999973 4589999999999999999999999999997
Q ss_pred HH
Q 006862 467 NA 468 (628)
Q Consensus 467 ~a 468 (628)
+.
T Consensus 1054 ~~ 1055 (1140)
T PRK06814 1054 EL 1055 (1140)
T ss_pred hc
Confidence 63
No 106
>PLN03102 acyl-activating enzyme; Provisional
Probab=98.67 E-value=5.2e-07 Score=103.20 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=50.8
Q ss_pred CceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 405 GQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 405 G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
|+.+||+|++ ..|+| +|||||++++.. ...+.|+||.++++++.|++++..+|++++..
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 464 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHP----DGHVEIKDRSKDIIISGGENISSVEVENVLYK 464 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcC----CCeEEEEeccCcEEEECCEEECHHHHHHHHHh
Confidence 3578999986 45666 599999999873 45799999999999999999999999999976
No 107
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=98.66 E-value=5.2e-07 Score=103.93 Aligned_cols=63 Identities=19% Similarity=0.286 Sum_probs=43.7
Q ss_pred CceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEeeecCceEec-cceecc--HHHHHHH
Q 006862 405 GQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSI-DSDKTD--EVELQNA 464 (628)
Q Consensus 405 G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i-~gek~~--e~~v~~a 464 (628)
|..+||+|.. +.|+|. |+|||+.++.+=......+.|+||.++++++ .|++++ +.|++.+
T Consensus 409 ~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~ 488 (614)
T PRK08180 409 GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAV 488 (614)
T ss_pred CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHH
Confidence 5567998854 445552 8999999985200112368899999988875 699776 7777776
Q ss_pred HHH
Q 006862 465 VKN 467 (628)
Q Consensus 465 v~~ 467 (628)
+..
T Consensus 489 l~~ 491 (614)
T PRK08180 489 SAG 491 (614)
T ss_pred hhc
Confidence 643
No 108
>PRK09192 acyl-CoA synthetase; Validated
Probab=98.65 E-value=3.7e-06 Score=95.95 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=53.1
Q ss_pred ccCCCceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHH
Q 006862 401 DVKLGQEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNA 464 (628)
Q Consensus 401 eve~G~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~a 464 (628)
++..|+.+||+|+. ..|+| .|+|||++.+. .-.+.|+||.+++++++|++++..+|+++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYLL-----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeEE-----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 46678899999975 34555 48999999773 34799999999999999999999999999
Q ss_pred HHHH
Q 006862 465 VKNA 468 (628)
Q Consensus 465 v~~a 468 (628)
|.+.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9874
No 109
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.62 E-value=2.6e-06 Score=96.58 Aligned_cols=130 Identities=14% Similarity=0.171 Sum_probs=86.6
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceecccccccccc--ccccCCCCC-CCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECY--FGVNLNPLC-KPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~--~gi~~~~~~-~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+.+|+. ..-..++++.+|...+. .+||.||.. +.+|.+... .|+.++..+ + +.-=.+..+..
T Consensus 301 l~~v~~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~~~-~--g~~~~v~~e~g----- 371 (537)
T KOG1176|consen 301 LRSVLSGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGSVGRLL-P--GVRVKVLDETG----- 371 (537)
T ss_pred cEEEEecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccccCccc-c--ceEEEeeCCCC-----
Confidence 455544543 33456666788656666 999999995 345544432 233344432 2 11111222211
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~g 443 (628)
..+.+++.+||+|-. ..|+|. |+|||+--++ ..-.+.+++
T Consensus 372 -------------------~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D----~DG~l~Ivd 428 (537)
T KOG1176|consen 372 -------------------VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFD----EDGYLYIVD 428 (537)
T ss_pred -------------------CCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEc----CCCeEEEec
Confidence 135578889999954 567774 9999996655 567899999
Q ss_pred ecCceEeccceeccHHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~a 468 (628)
|.+|+|+..|+++.+.||+++|...
T Consensus 429 R~KdlIk~~G~qv~P~EiE~vL~~h 453 (537)
T KOG1176|consen 429 RSKDLIKYGGEQVSPAEIEAVLLTH 453 (537)
T ss_pred chhhheeeCCEEeCHHHHHHHHHhC
Confidence 9999999999999999999999763
No 110
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=98.62 E-value=8.6e-07 Score=103.93 Aligned_cols=61 Identities=16% Similarity=0.256 Sum_probs=50.7
Q ss_pred CCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEeeecCceEe-ccceeccHHHHHHH
Q 006862 403 KLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLS-IDSDKTDEVELQNA 464 (628)
Q Consensus 403 e~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~-i~gek~~e~~v~~a 464 (628)
.+|..+||+|.. +.|+|+ |||||+.++.. .-.+.|+||.+++++ ..|+++.+.+|+++
T Consensus 503 ~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~ 578 (700)
T PTZ00216 503 TPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKALAKNCLGEYIALEALEAL 578 (700)
T ss_pred CCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHhheecCCCceeccHHHHHH
Confidence 445668999964 456663 99999999973 457999999999997 89999999999999
Q ss_pred HHH
Q 006862 465 VKN 467 (628)
Q Consensus 465 v~~ 467 (628)
+.+
T Consensus 579 l~~ 581 (700)
T PTZ00216 579 YGQ 581 (700)
T ss_pred Hhc
Confidence 976
No 111
>PRK12582 acyl-CoA synthetase; Provisional
Probab=98.62 E-value=5.6e-07 Score=103.87 Aligned_cols=64 Identities=20% Similarity=0.291 Sum_probs=47.2
Q ss_pred CCCceEEEEEee---ccceEe--------------eeeCCEEEEecccCCCCEEEEeeecCceEec-cceeccHHHHH--
Q 006862 403 KLGQEYELVVTT---YAGLYR--------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSI-DSDKTDEVELQ-- 462 (628)
Q Consensus 403 e~G~~YeLVvTt---~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i-~gek~~e~~v~-- 462 (628)
..|+.+||+|.. ..|+|. |+|||+.++..-......+.|+||.++++++ .|+|++..+++
T Consensus 419 ~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e 498 (624)
T PRK12582 419 PVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPD 498 (624)
T ss_pred cCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHH
Confidence 468889999965 456662 9999999984211123468999999999886 69999988775
Q ss_pred HHHH
Q 006862 463 NAVK 466 (628)
Q Consensus 463 ~av~ 466 (628)
.++.
T Consensus 499 ~~l~ 502 (624)
T PRK12582 499 AVAA 502 (624)
T ss_pred HHHh
Confidence 4543
No 112
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=98.61 E-value=1e-06 Score=95.74 Aligned_cols=64 Identities=20% Similarity=0.381 Sum_probs=54.5
Q ss_pred cccCCCceEEEEEe---eccceEe--------------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHH
Q 006862 400 VDVKLGQEYELVVT---TYAGLYR--------------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQ 462 (628)
Q Consensus 400 ~eve~G~~YeLVvT---t~~GLyR--------------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~ 462 (628)
.+++.|..+||.+- |..|+|- |+|||+-++.- ...++++||.+|||..+||++.+.||+
T Consensus 425 ~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGRskdmI~rGGENVyP~ElE 500 (596)
T KOG1177|consen 425 SEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGRSKDMIIRGGENVYPTELE 500 (596)
T ss_pred CccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEcccCeEEeCCcccChHHHH
Confidence 35677888999995 4466774 99999999884 457999999999999999999999999
Q ss_pred HHHHH
Q 006862 463 NAVKN 467 (628)
Q Consensus 463 ~av~~ 467 (628)
+.+.+
T Consensus 501 ~fL~~ 505 (596)
T KOG1177|consen 501 DFLNK 505 (596)
T ss_pred HHHhh
Confidence 98865
No 113
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=98.60 E-value=5.1e-07 Score=97.78 Aligned_cols=106 Identities=19% Similarity=0.326 Sum_probs=69.4
Q ss_pred cchHHHHHhhcCCCceeccccccccccccccCC--CCC--CCCCCceeecCCceEEEEEeCCCCCCCcccCCCCcccccc
Q 006862 316 SQYIPILDYYSNGLPLVCTMYASSECYFGVNLN--PLC--KPSEVSYTLVPTMAYFEFLPVHRNNGVANSISMPKSLNEK 391 (628)
Q Consensus 316 ~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~--~~~--~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~ 391 (628)
...++.+++.++..+++ +.||+||+....... ... .+...+ ..+| ..-++.++.++.+
T Consensus 291 ~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G-~~~~-~~~~~ivd~~~~~--------------- 352 (417)
T PF00501_consen 291 PDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPGSVG-KPLP-GVEVKIVDPNTGE--------------- 352 (417)
T ss_dssp HHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEB-EEST-TEEEEEECTTTSS---------------
T ss_pred hhhccccccccccccce-ecccccccceeeeccccccccccccccc-cccc-ccccccccccccc---------------
Confidence 44456777888555888 999999995433211 111 111222 2234 3456666544221
Q ss_pred ccceeeeccccCCCceEEEEEee---ccceE--------------eeeeCCEEEEecccCCCCEEEEeeecCceEecc
Q 006862 392 ERQELVDLVDVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSID 452 (628)
Q Consensus 392 ~~~~~v~l~eve~G~~YeLVvTt---~~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~ 452 (628)
.+..|+.+||+|+. ..|+| -|||||++++.. ...|.++||.+++++++
T Consensus 353 ---------~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 353 ---------PLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----DGYLYILGRSDDMIKVR 417 (417)
T ss_dssp ---------BESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----TSEEEEEEEGSCEEEET
T ss_pred ---------cccccccccccccCCccceeeeccccccccccccccceecceEEEECC----CCeEEEEEeeCCEEEeC
Confidence 35689999999985 34544 399999999983 35999999999999874
No 114
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=98.58 E-value=1.3e-05 Score=90.69 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=48.1
Q ss_pred ceEEEEEee---ccceEe-----------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 406 QEYELVVTT---YAGLYR-----------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 406 ~~YeLVvTt---~~GLyR-----------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
..+||+|.. ..|+|. |+|||++++.. .-.+.|+||.++++++.|++++..+|+.++..
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGYMRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred ceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----CccEEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 468999964 345553 99999998863 34799999999999999999999999999965
No 115
>PLN02479 acetate-CoA ligase
Probab=98.53 E-value=8.5e-06 Score=92.79 Aligned_cols=58 Identities=16% Similarity=0.194 Sum_probs=49.2
Q ss_pred ceEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHH
Q 006862 406 QEYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKN 467 (628)
Q Consensus 406 ~~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~ 467 (628)
+.+||+|+. ..|+| .|||||++++.. ...+.|+||.++++++.|++++..+|+.++..
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHP----DGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcC----CccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 568999985 34555 499999999873 45799999999999999999999999999965
No 116
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.44 E-value=1.4e-05 Score=91.23 Aligned_cols=233 Identities=15% Similarity=0.125 Sum_probs=133.2
Q ss_pred ceeEEEEcCCc---cchHHHHHhhcCCCceecccccccccc-ccccCCCCCCCCCCceeecCCce-EEEEEeCCCCCCCc
Q 006862 305 KYVDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECY-FGVNLNPLCKPSEVSYTLVPTMA-YFEFLPVHRNNGVA 379 (628)
Q Consensus 305 ~~i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~-~gi~~~~~~~p~~~~~~l~~~~~-~fEFip~~~~~~~~ 379 (628)
+.|+++.+.+- ..-.+.+.+.++..||+ +.|+.||+. +-+.-.+...|-..++.=.|..+ .++.++++
T Consensus 359 ~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~------ 431 (626)
T KOG1175|consen 359 KSLRTCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDEN------ 431 (626)
T ss_pred ceEEEEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCC------
Confidence 44777776663 23235566677434677 999999983 22211111101111222233333 22333321
Q ss_pred ccCCCCccccccccceeeeccccCCC-ceEEEEEee------ccceEe----------------eeeCCEEEEecccCCC
Q 006862 380 NSISMPKSLNEKERQELVDLVDVKLG-QEYELVVTT------YAGLYR----------------YRVGDVLRVAGFKNKA 436 (628)
Q Consensus 380 ~~~~~~~~~~~~~~~~~v~l~eve~G-~~YeLVvTt------~~GLyR----------------Yr~GDvv~v~gf~~~~ 436 (628)
..+++.+ +.+||+++. ..++|+ |.+||-.+.+ +.
T Consensus 432 -------------------g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd----~d 488 (626)
T KOG1175|consen 432 -------------------GNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRD----ED 488 (626)
T ss_pred -------------------CCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEc----CC
Confidence 1134444 688999975 223442 9999999998 56
Q ss_pred CEEEEeeecCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceEE-EEEEEeeCCCCCCCcchHH
Q 006862 437 PQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVPGHYV-LYWELSLNGTTPIPPSVFE 515 (628)
Q Consensus 437 P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~~Yv-l~~El~~~~~~~~~~~~l~ 515 (628)
..|.+.||.+|++|+.|-+++-.||++|+.+.-. |.|-+++.-.....|.-+ .|+-+.. +....++...
T Consensus 489 GY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~--------VaEsAvVg~p~~~~ge~v~aFvvl~~--g~~~~~~L~k 558 (626)
T KOG1175|consen 489 GYYWILGRVDDVINVSGHRIGTAEIESALVEHPA--------VAESAVVGSPDPIKGEVVLAFVVLKS--GSHDPEQLTK 558 (626)
T ss_pred ceEEEEecccccccccceeecHHHHHHHHhhCcc--------hhheeeecCCCCCCCeEEEEEEEEcC--CCCChHHHHH
Confidence 7899999999999999999999999999965321 334444322212233333 5555542 2222222333
Q ss_pred HHHHHHHHHhChhhHhcccCCCccCCe-EEEEc---CCccHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhhcc
Q 006862 516 DCCLTIEESLNSVYRQGRVCDKSIGPL-EIKIV---EPGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRV 588 (628)
Q Consensus 516 ~~~~~ld~~Ln~~Y~~~R~~~~~l~pl-~v~~V---~~GtF~~l~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~v 588 (628)
++...|-..+++ +.-| .|..| +.=...+.|+.++.+-.+.-|++-.-.+.|+++++.+.+.+
T Consensus 559 el~~~VR~~igp-----------~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~st~~dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 559 ELVKHVRSVIGP-----------YAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTSTLADPSVIDHLRSIL 624 (626)
T ss_pred HHHHHHHhhcCc-----------ccccceeEecCCCCccccchhHHHHHHHHhccCccccccccCChHHHHHHHHhh
Confidence 333333333333 2222 23333 44456678877776544444888889999999999988754
No 117
>PRK13391 acyl-CoA synthetase; Provisional
Probab=98.43 E-value=1e-05 Score=90.67 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=82.5
Q ss_pred eEEEEcCCc---cchHHHHHhhcCCCceeccccccccccccccCCCC-C--CCCCCceeecCCceEEEEEeCCCCCCCcc
Q 006862 307 VDVIVTGTM---SQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPL-C--KPSEVSYTLVPTMAYFEFLPVHRNNGVAN 380 (628)
Q Consensus 307 i~~~~~G~~---~~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~-~--~p~~~~~~l~~~~~~fEFip~~~~~~~~~ 380 (628)
++.+++|+. ....+.+++.+ |.+++ .+||+||+....-.... + .+...+. |-.+..+.++.+.
T Consensus 277 l~~~~~gg~~~~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~---~~~g~~~i~d~~~------ 345 (511)
T PRK13391 277 LEVAIHAAAPCPPQVKEQMIDWW-GPIIH-EYYAATEGLGFTACDSEEWLAHPGTVGR---AMFGDLHILDDDG------ 345 (511)
T ss_pred eeEEEEccCCCCHHHHHHHHHHc-CCcee-eeeccccccceEEecCccccccCCCcCC---cccceEEEECCCC------
Confidence 566676663 33345666767 57777 99999998532111111 0 0111222 1112233333221
Q ss_pred cCCCCccccccccceeeeccccCCCceEEEEEeec--cceE---------------eeeeCCEEEEecccCCCCEEEEee
Q 006862 381 SISMPKSLNEKERQELVDLVDVKLGQEYELVVTTY--AGLY---------------RYRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 381 ~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt~--~GLy---------------RYr~GDvv~v~gf~~~~P~~~f~g 443 (628)
..++.|+.+||++... .|+| -|+|||+.++.. .-.+.|+|
T Consensus 346 -------------------~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~g 402 (511)
T PRK13391 346 -------------------AELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTD 402 (511)
T ss_pred -------------------CCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEec
Confidence 1346788899999762 2333 378999998863 45799999
Q ss_pred ecCceEeccceeccHHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~a 468 (628)
|.++++++.|+++...+|++++...
T Consensus 403 R~~~~i~~~G~~v~~~eie~~l~~~ 427 (511)
T PRK13391 403 RAAFMIISGGVNIYPQEAENLLITH 427 (511)
T ss_pred cCCCEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999753
No 118
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.42 E-value=8.4e-06 Score=90.97 Aligned_cols=62 Identities=16% Similarity=0.077 Sum_probs=51.8
Q ss_pred cCCCceEEEEEeec---cceE----------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHH
Q 006862 402 VKLGQEYELVVTTY---AGLY----------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQ 462 (628)
Q Consensus 402 ve~G~~YeLVvTt~---~GLy----------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~ 462 (628)
+..|+.+||+|.+. .|+| -|+|||++++.. .-.+.|.||.++++++.|+++++.+|+
T Consensus 343 ~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR~~~~i~~~G~~v~p~eIE 418 (501)
T PRK13390 343 LPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADRKSFMIISGGVNIYPQETE 418 (501)
T ss_pred CCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeeccccceeECCeeeCHHHHH
Confidence 56899999999763 2332 259999999973 357999999999999999999999999
Q ss_pred HHHHH
Q 006862 463 NAVKN 467 (628)
Q Consensus 463 ~av~~ 467 (628)
++|..
T Consensus 419 ~~l~~ 423 (501)
T PRK13390 419 NALTM 423 (501)
T ss_pred HHHHh
Confidence 99964
No 119
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.36 E-value=8e-06 Score=99.59 Aligned_cols=140 Identities=10% Similarity=0.099 Sum_probs=86.6
Q ss_pred eeEEEEcCCcc-chHHHHHhhcCCCceeccccccccccccccCCCCCCCCCCceeecCCceEEEEEeCCCCCCCcccCCC
Q 006862 306 YVDVIVTGTMS-QYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLVPTMAYFEFLPVHRNNGVANSISM 384 (628)
Q Consensus 306 ~i~~~~~G~~~-~y~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~p~~~~~~l~~~~~~fEFip~~~~~~~~~~~~~ 384 (628)
.++.+++|++. ...+++.+.+++++++ +.||.||+.+.+...+...+...+.. +|+..-++..+.+...
T Consensus 721 slr~~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~svG~p-~pg~~~v~i~~~d~~~-------- 790 (994)
T PRK07868 721 PVRLFIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAKIGSKGRP-LPGAGRVELAAYDPEH-------- 790 (994)
T ss_pred ceEEEecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCCCcccCCc-cCCCCceeEEEecCcC--------
Confidence 36666666653 3456667778678888 99999998542211011111222322 2332122222211000
Q ss_pred Cccccccccceee-e----ccccCCCceEEEEEeec----------cceE-----eeeeCCEEEEecccCCCCEEEEeee
Q 006862 385 PKSLNEKERQELV-D----LVDVKLGQEYELVVTTY----------AGLY-----RYRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 385 ~~~~~~~~~~~~v-~----l~eve~G~~YeLVvTt~----------~GLy-----RYr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
.+.+ + +.+++.|+.+||++... .|.+ -|||||+.++. ..-.+.|+||
T Consensus 791 ---------g~li~d~~G~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d----~dG~l~~~GR 857 (994)
T PRK07868 791 ---------DLILEDDRGFVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRD----DDGDYWLVDR 857 (994)
T ss_pred ---------CceeecCCceEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEc----CCCCEEEecc
Confidence 0111 1 12467899999998642 2223 38899999987 2457999999
Q ss_pred cCceEeccceeccHHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.++++++.|+++...||++++.+.
T Consensus 858 ~dd~Ik~~G~~I~p~EIE~~L~~h 881 (994)
T PRK07868 858 RGSVIRTARGPVYTEPVTDALGRI 881 (994)
T ss_pred CCCEEEeCCceEcHHHHHHHHhcC
Confidence 999999999999999999999763
No 120
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.35 E-value=1.1e-05 Score=88.97 Aligned_cols=44 Identities=7% Similarity=0.123 Sum_probs=39.3
Q ss_pred eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 420 RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 420 RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.|+|||+.++. .-.+.|+||.++++++.|++++..+|+++|...
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~ 376 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQH 376 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhcC
Confidence 48999999987 236999999999999999999999999999763
No 121
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.34 E-value=1e-05 Score=88.54 Aligned_cols=45 Identities=16% Similarity=0.265 Sum_probs=39.9
Q ss_pred eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 420 RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 420 RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.|++||+.++.. ...|.|+||.++++++.|++++..+|++++.+.
T Consensus 276 ~~~tgD~g~~d~----~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~ 320 (386)
T TIGR02372 276 RLDLQDRLAWDK----DGGFTILGRKDEILQVGGVNVSPGHVRDILERN 320 (386)
T ss_pred eeecCceEEEcC----CCcEEEecccCCEEEECCEEEcHHHHHHHHHcC
Confidence 378999998873 568999999999999999999999999999763
No 122
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=98.33 E-value=1.1e-05 Score=89.52 Aligned_cols=61 Identities=11% Similarity=0.218 Sum_probs=50.9
Q ss_pred CCceEEEEEee---ccceEe--------eeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 404 LGQEYELVVTT---YAGLYR--------YRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 404 ~G~~YeLVvTt---~~GLyR--------Yr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.|+.+||+|.. ..|+|. |+|||++++.. ...+.|+||.++++++.|+|+++.+|++++...
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDA----QGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcC----CCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 48889999954 445542 89999999862 457999999999999999999999999999763
No 123
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=98.26 E-value=2.4e-06 Score=97.57 Aligned_cols=135 Identities=21% Similarity=0.257 Sum_probs=89.8
Q ss_pred ccCCCCceeEEEEcCCccchHHHHH--hhcCCCceeccccccccccccccCCCCCC--CCCCceeecCCceEEEEEeCCC
Q 006862 299 RLWPNTKYVDVIVTGTMSQYIPILD--YYSNGLPLVCTMYASSECYFGVNLNPLCK--PSEVSYTLVPTMAYFEFLPVHR 374 (628)
Q Consensus 299 ~lWP~l~~i~~~~~G~~~~y~~~l~--~~~~g~p~~~~~Y~aSEg~~gi~~~~~~~--p~~~~~~l~~~~~~fEFip~~~ 374 (628)
.||+| ++.+++|++..-...++ ....|++|+ ++||-||+.-|..+....+ ..+++- .+|. +-+=++++++
T Consensus 416 ~LGg~---vr~~~sGaAPls~ev~~F~r~~~g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~-p~p~-~~vKL~dvpe 489 (691)
T KOG1256|consen 416 SLGGN---VRLIISGAAPLSPEVLTFFRAALGCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGP-PVPG-NEVKLVDVPE 489 (691)
T ss_pred HhcCc---eeEEEecCCCCCHHHHHHHHHhcCceee-ecccccccCCceEeccCCCCCCCCcCC-cccC-ceEEEechHH
Confidence 46778 78999998643333333 223379999 9999999986544322111 111111 1121 1122222222
Q ss_pred CCCCcccCCCCccccccccceeeeccccCCCceEEEEEe---eccceEe--------------eeeCCEEEEecccCCCC
Q 006862 375 NNGVANSISMPKSLNEKERQELVDLVDVKLGQEYELVVT---TYAGLYR--------------YRVGDVLRVAGFKNKAP 437 (628)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YeLVvT---t~~GLyR--------------Yr~GDvv~v~gf~~~~P 437 (628)
.+ --..|..+||.|- -+.|+|- .+|||+-++.. ..
T Consensus 490 ~n------------------------y~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G 541 (691)
T KOG1256|consen 490 MN------------------------YDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NG 541 (691)
T ss_pred hC------------------------cCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----Cc
Confidence 21 1234668999995 3889995 89999999995 56
Q ss_pred EEEEeeecCceEecc-ceeccHHHHHHHHHH
Q 006862 438 QFNFICRKNVVLSID-SDKTDEVELQNAVKN 467 (628)
Q Consensus 438 ~~~f~gR~~~~l~i~-gek~~e~~v~~av~~ 467 (628)
.+.+++|+++++++. ||.+.++.|+++..+
T Consensus 542 ~l~IidRkK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 542 TLKIIDRKKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred cEEEEecccceEEcCCCCccChHHHHHHHhc
Confidence 899999999998876 899999999999976
No 124
>PRK05850 acyl-CoA synthetase; Validated
Probab=98.25 E-value=3.9e-05 Score=87.36 Aligned_cols=64 Identities=17% Similarity=0.284 Sum_probs=53.6
Q ss_pred cccCCCceEEEEEee---ccceE-------------------------eeeeCCEEEEecccCCCCEEEEeeecCceEec
Q 006862 400 VDVKLGQEYELVVTT---YAGLY-------------------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSI 451 (628)
Q Consensus 400 ~eve~G~~YeLVvTt---~~GLy-------------------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i 451 (628)
.++..|+.+||+|.. ..|+| -|+|||+.++. .-.+.|+||.++++++
T Consensus 390 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~ 464 (578)
T PRK05850 390 IECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIV 464 (578)
T ss_pred cCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEE
Confidence 357789999999975 33544 49999998775 2479999999999999
Q ss_pred cceeccHHHHHHHHHHH
Q 006862 452 DSDKTDEVELQNAVKNA 468 (628)
Q Consensus 452 ~gek~~e~~v~~av~~a 468 (628)
.|++++..+|+.+|...
T Consensus 465 ~G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 465 DGRNHYPDDIEATIQEI 481 (578)
T ss_pred CCeecCHHHHHHHHHHh
Confidence 99999999999999864
No 125
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.22 E-value=2.9e-05 Score=89.48 Aligned_cols=65 Identities=17% Similarity=0.186 Sum_probs=54.1
Q ss_pred ccccCCCceEEEEEee---ccceE--------------------------------eeeeCCEEEEecccCCCCEEEEee
Q 006862 399 LVDVKLGQEYELVVTT---YAGLY--------------------------------RYRVGDVLRVAGFKNKAPQFNFIC 443 (628)
Q Consensus 399 l~eve~G~~YeLVvTt---~~GLy--------------------------------RYr~GDvv~v~gf~~~~P~~~f~g 443 (628)
..++.+|+.+||+|.. ..|+| -|+|||+.++. .-.+.|+|
T Consensus 421 g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~G 495 (612)
T PRK12476 421 GAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITG 495 (612)
T ss_pred CcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEe
Confidence 3457789999999965 34554 58999999764 24699999
Q ss_pred ecCceEeccceeccHHHHHHHHHHH
Q 006862 444 RKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 444 R~~~~l~i~gek~~e~~v~~av~~a 468 (628)
|.++++++.|++++..+|+++|.+.
T Consensus 496 R~~d~I~~~G~~I~p~eIE~~l~~~ 520 (612)
T PRK12476 496 RIADLIVIDGRNHYPQDIEATVAEA 520 (612)
T ss_pred ccCcEEEECCcccCHHHHHHHHHHh
Confidence 9999999999999999999999764
No 126
>PRK08162 acyl-CoA synthetase; Validated
Probab=97.94 E-value=0.00024 Score=80.17 Aligned_cols=58 Identities=10% Similarity=0.198 Sum_probs=49.5
Q ss_pred eEEEEEee---ccceE-------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 407 EYELVVTT---YAGLY-------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 407 ~YeLVvTt---~~GLy-------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
.+||+|+. ..|+| .|+|||++++.. ...+.|+||.++++++.|++++..+|+.++.+.
T Consensus 388 ~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~ 461 (545)
T PRK08162 388 IGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYRH 461 (545)
T ss_pred eeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHhC
Confidence 58999986 34555 399999999874 357999999999999999999999999999753
No 127
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=97.89 E-value=0.00075 Score=75.32 Aligned_cols=225 Identities=16% Similarity=0.174 Sum_probs=129.2
Q ss_pred ccchHHHHHhhcCCCceecccccccccccc-ccCCCCCCCCCCceee-cCCceEEEEEeCCCCCCCcccCCCCccccccc
Q 006862 315 MSQYIPILDYYSNGLPLVCTMYASSECYFG-VNLNPLCKPSEVSYTL-VPTMAYFEFLPVHRNNGVANSISMPKSLNEKE 392 (628)
Q Consensus 315 ~~~y~~~l~~~~~g~p~~~~~Y~aSEg~~g-i~~~~~~~p~~~~~~l-~~~~~~fEFip~~~~~~~~~~~~~~~~~~~~~ 392 (628)
-++..+++.+.| |.+.+++.||||||-++ +|.+..+. .-.-+.. .....=|+.|-.+....+. ...+
T Consensus 368 R~diW~~Fv~RF-g~~~IgE~YgaTEgn~~~~N~d~~vG-A~G~~~~~~~~l~p~~LIk~D~~t~E~---------iRd~ 436 (649)
T KOG1179|consen 368 RPDIWQQFVKRF-GIIKIGEFYGATEGNSNLVNYDGRVG-ACGFMSRLLKLLYPFRLIKVDPETGEP---------IRDS 436 (649)
T ss_pred CchHHHHHHHHc-CCCeEEEEeccccCcceeeeecCccc-cccchhhhhhhccceEEEEecCCCCce---------eecC
Confidence 355567888889 66666699999999664 45554332 1111111 1111226667666433210 0011
Q ss_pred cceeeeccccCCCceEEEEEe--------eccc-----------eEe---------eeeCCEEEEecccCCCCEEEEeee
Q 006862 393 RQELVDLVDVKLGQEYELVVT--------TYAG-----------LYR---------YRVGDVLRVAGFKNKAPQFNFICR 444 (628)
Q Consensus 393 ~~~~v~l~eve~G~~YeLVvT--------t~~G-----------LyR---------Yr~GDvv~v~gf~~~~P~~~f~gR 444 (628)
++--+ -+++||.+.||=. .+.| ++| |.+||++..+. --.+.|..|
T Consensus 437 ~G~Ci---~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~DR 509 (649)
T KOG1179|consen 437 QGLCI---PCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKDR 509 (649)
T ss_pred CceEE---ECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEecc
Confidence 22222 3678999976643 1333 233 99999998883 457899999
Q ss_pred cCceEeccceeccHHHHHHHHHHHHhhcCCCCceEEeEEEe-ecCCCCCceEEEEEEEeeCCCCCCCcchHHHHHHHHHH
Q 006862 445 KNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSY-ADTTTVPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEE 523 (628)
Q Consensus 445 ~~~~l~i~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~-~d~~~~p~~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~ 523 (628)
.+|..--.||+++-.||+..+..... ++ ++.-|-+. ...++..|-=.|. ++ +.....++.+-..+.+
T Consensus 510 tGDTFRWKGENVsTtEVe~~l~~~~~-~~----dv~VYGV~VP~~EGRaGMAaI~--~~-----p~~~~d~~~l~~~l~~ 577 (649)
T KOG1179|consen 510 TGDTFRWKGENVSTTEVEDVLSALDF-LQ----DVNVYGVTVPGYEGRAGMAAIV--LD-----PTTEKDLEKLYQHLRE 577 (649)
T ss_pred CCCceeecCCcccHHHHHHHHhhhcc-cc----ceeEEEEecCCccCccceEEEE--ec-----CcccchHHHHHHHHHh
Confidence 99999999999999999998876432 21 12223332 2223333322222 11 1122345556666666
Q ss_pred HhChhhHhcccCCCccCCeEEEEcCCccHHHHHHHHHhcCCCCCCCCCCccc
Q 006862 524 SLNSVYRQGRVCDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCV 575 (628)
Q Consensus 524 ~Ln~~Y~~~R~~~~~l~pl~v~~V~~GtF~~l~~~~~~~G~~~~Q~K~Pr~~ 575 (628)
.| +.|+.=|.- +... .+=.-|||....-..++.|-..++.+-|--+
T Consensus 578 ~L-P~YA~P~Fl-Rl~~----~i~~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 578 NL-PSYARPRFL-RLQD----EIEKTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred hC-ccccchHHH-HHHh----hhhcccchhhHHHHHHHccCCccccCCceEE
Confidence 65 335544421 0111 2335699997776677788888888888654
No 128
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=97.77 E-value=0.0017 Score=70.67 Aligned_cols=80 Identities=18% Similarity=0.292 Sum_probs=50.2
Q ss_pred HHHHHHHHHHH-hcCCChHHHhh----CCCCCCChhhHhhhCCCCChhhhHHHHHHHHcCCCCCcccCCCcceeeccccc
Q 006862 36 VQKKVLSEILL-RNAHVEYLQRN----GLNGHTDRESFKKTMPVITYEDIQADINRIANGDTSPILCSKPISEFLTSSGT 110 (628)
Q Consensus 36 ~Q~~~L~~iL~-~n~~T~ygr~~----gf~~i~~~edF~~~vPl~tYedl~pyIeRi~~Ge~~~lL~~~pi~~f~~TSGT 110 (628)
...+.++++.+ +.++++.||++ |++ .++++. ..+|.+--.-++. ..+.... .+.+.....||||
T Consensus 32 l~~~~~~~~~~~q~~~~~~Yr~~~~~~~~~--~~v~~~-~dIP~lPi~~FK~--~~L~S~~------~e~~~~~~tSSGT 100 (365)
T PF04443_consen 32 LFLALALELFRYQYEHNPPYRKYCDALGFD--EDVKDL-EDIPFLPIRFFKE--HELLSVP------EEEVEKVFTSSGT 100 (365)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHcCCC--cccccH-HHCCcchHHHHhh--ceeeecC------hhhheeEEECCCC
Confidence 34455555555 47899999997 555 455565 4678777777773 2222221 2345567899999
Q ss_pred CCCcccccccCHHHHHH
Q 006862 111 SGGERKLMPTIEEELER 127 (628)
Q Consensus 111 T~G~~K~IP~t~~~l~~ 127 (628)
| |.+-.|......+..
T Consensus 101 t-G~~S~i~~D~~t~~~ 116 (365)
T PF04443_consen 101 T-GQPSRIFRDRETAER 116 (365)
T ss_pred C-CCCcEEEECHHHHHH
Confidence 9 565567776654443
No 129
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=97.35 E-value=0.03 Score=62.80 Aligned_cols=146 Identities=16% Similarity=0.205 Sum_probs=86.8
Q ss_pred eEEEEcCCccch--HHHHHhhcCCCceeccccccccccccccC-CCCCCC-CCCceeecCCceEEEEEeCCCCCCCcccC
Q 006862 307 VDVIVTGTMSQY--IPILDYYSNGLPLVCTMYASSECYFGVNL-NPLCKP-SEVSYTLVPTMAYFEFLPVHRNNGVANSI 382 (628)
Q Consensus 307 i~~~~~G~~~~y--~~~l~~~~~g~p~~~~~Y~aSEg~~gi~~-~~~~~p-~~~~~~l~~~~~~fEFip~~~~~~~~~~~ 382 (628)
|+-+++||++.- .+++-..+=.+|+. -+||-||..-|..+ ++.+.. ..++-.+ ..+.+-.++.++.+=..
T Consensus 404 lR~~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~~~g~vG~pl--~c~eiKLvdw~EgGY~~--- 477 (678)
T KOG1180|consen 404 LRYILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDFSTGRVGAPL--PCCEIKLVDWEEGGYFA--- 477 (678)
T ss_pred eEEEEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhcccccccCCc--cceEEEEEEhhhcCccC---
Confidence 677888886432 34443333256998 99999998654332 332210 1111111 22344444444322100
Q ss_pred CCCccccccccceeeeccccCCCceEEEEEee--------------------ccceEeeeeCCEEEEecccCCCCEEEEe
Q 006862 383 SMPKSLNEKERQELVDLVDVKLGQEYELVVTT--------------------YAGLYRYRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 383 ~~~~~~~~~~~~~~v~l~eve~G~~YeLVvTt--------------------~~GLyRYr~GDvv~v~gf~~~~P~~~f~ 442 (628)
. + .+ =++||+|+- ..|---|+||||.+++ ...+++++
T Consensus 478 ----~-~-------------~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~----pdG~LkII 534 (678)
T KOG1180|consen 478 ----K-N-------------KP-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFH----PDGCLKII 534 (678)
T ss_pred ----C-C-------------CC-CCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceec----CCCcEEEe
Confidence 0 0 00 145777753 2343349999999998 35589999
Q ss_pred eecCceEec-cceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecCC
Q 006862 443 CRKNVVLSI-DSDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADTT 489 (628)
Q Consensus 443 gR~~~~l~i-~gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~ 489 (628)
.|++|++++ +||-++=+-|+.|+... =-|.+-++++|..
T Consensus 535 DRKKdLVKlq~GEYIsL~KvEa~l~s~--------p~V~NICvyAd~~ 574 (678)
T KOG1180|consen 535 DRKKDLVKLQNGEYISLGKVEAALRSS--------PYVDNICVYADSN 574 (678)
T ss_pred echhhhhhhcccceeehHHHHHHHhcC--------cchhheEEecccc
Confidence 999999765 69999999998888652 1244677888854
No 130
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.41 E-value=0.4 Score=55.51 Aligned_cols=63 Identities=24% Similarity=0.372 Sum_probs=48.9
Q ss_pred ccCCCceEEEEEeec---cceE--------------eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHH
Q 006862 401 DVKLGQEYELVVTTY---AGLY--------------RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQN 463 (628)
Q Consensus 401 eve~G~~YeLVvTt~---~GLy--------------RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~ 463 (628)
.+..|..+|+.|+.. .|++ -||+||++|.. ..-.++|+||.+..+++.|..+-..+|+.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHH
Confidence 456777788888752 2321 39999999933 34589999999999999999998888888
Q ss_pred HHHH
Q 006862 464 AVKN 467 (628)
Q Consensus 464 av~~ 467 (628)
++..
T Consensus 637 ~l~~ 640 (642)
T COG1020 637 ALAE 640 (642)
T ss_pred HHhc
Confidence 7743
No 131
>PTZ00297 pantothenate kinase; Provisional
Probab=92.86 E-value=1.6 Score=55.56 Aligned_cols=56 Identities=16% Similarity=0.111 Sum_probs=37.4
Q ss_pred eEEEEEeeccceEeeeeCCEEEEecccCCCCEEEEeeecCceEec-cceeccHHHHHHHHHH
Q 006862 407 EYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSI-DSDKTDEVELQNAVKN 467 (628)
Q Consensus 407 ~YeLVvTt~~GLyRYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i-~gek~~e~~v~~av~~ 467 (628)
.+||+|--. +-. =.|+++ +.|+. ..-.++++||++++++. .||.|.++.|++++..
T Consensus 825 ~GEIlvr~~-kdp-e~T~e~--~~gW~-~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 825 IGQLVLAKK-GEP-RRTLPI--AAQWK-RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CCeEEEEEC-CCh-HHHHHh--hCcCc-cCCeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 478888310 000 124453 24553 34689999999999665 4899999999999854
No 132
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=91.39 E-value=0.4 Score=41.95 Aligned_cols=84 Identities=15% Similarity=0.160 Sum_probs=47.2
Q ss_pred ceeccHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceEEEEEEEeeCCCCCCCcchHHHHHHHHHHHhChhhHhc
Q 006862 453 SDKTDEVELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQG 532 (628)
Q Consensus 453 gek~~e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~ 532 (628)
|.++++.+|+++|.+.. ++ -.+|.+..+....-.+..+.+|+.. ....+...++.++..|.++|..
T Consensus 1 GvnvfP~~Ie~vl~~~~------~~-~~~y~i~v~~~~~~D~l~v~vE~~~--~~~~~~~~~~~l~~~i~~~lk~----- 66 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFP------EV-SPEYQIVVTREGGLDELTVRVELRP--GFSDDAEDLEALAERIAERLKE----- 66 (96)
T ss_dssp TEEE-HHHHHHHHCTST------TE-EEEEEEEEEEETTEEEEEEEEEEST--TCCTTHHHHHHHHHHHHHHHHH-----
T ss_pred CcEECHHHHHHHHHhCc------CC-CCcEEEEEEcCCCCcEEEEEEEECC--ccCcchHHHHHHHHHHHHHHHh-----
Confidence 67899999999997642 21 1278876654333334445566542 1111224566677777776644
Q ss_pred ccCCCccCCeEEEEcCCccHHH
Q 006862 533 RVCDKSIGPLEIKIVEPGTFDK 554 (628)
Q Consensus 533 R~~~~~l~pl~v~~V~~GtF~~ 554 (628)
.. .+. ++|++|++|++.+
T Consensus 67 --~l-gv~-~~V~lv~~gtLpr 84 (96)
T PF14535_consen 67 --RL-GVR-PEVELVPPGTLPR 84 (96)
T ss_dssp --HH-SS--EEEEEE-TT-S--
T ss_pred --hc-Cce-EEEEEECCCCccC
Confidence 22 244 4999999999997
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=80.30 E-value=2.6 Score=46.08 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=32.3
Q ss_pred eeeeCCEEEEecccCCCCEEEEeeecCceEeccc---eeccHHHHHHHHHHH
Q 006862 420 RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDS---DKTDEVELQNAVKNA 468 (628)
Q Consensus 420 RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~g---ek~~e~~v~~av~~a 468 (628)
-|+|||++++. .....+.|+||.+ .| +++++. |++++.+.
T Consensus 210 W~~TGDlg~~~---d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~h 252 (365)
T PRK09188 210 WLATGKKVYNF---ITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSD 252 (365)
T ss_pred EEeCCCEEEEE---cCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhC
Confidence 48899999973 1245799999997 78 899999 99888763
No 134
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=58.72 E-value=8.9 Score=42.63 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=21.0
Q ss_pred CCcceeecccccCCCcccccccCHHHHH
Q 006862 99 KPISEFLTSSGTSGGERKLMPTIEEELE 126 (628)
Q Consensus 99 ~pi~~f~~TSGTT~G~~K~IP~t~~~l~ 126 (628)
+.......||||| |.||-+..|.+.+.
T Consensus 120 ~~~~~i~~TSGTT-G~PKgV~~t~~~l~ 146 (452)
T PRK07445 120 ETGWIMIPTGGSS-GQIRFAIHTWETLT 146 (452)
T ss_pred CCcEEEEeCCCCC-CCCcEEEechHHHH
Confidence 3344566799999 89999999987653
No 135
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.42 E-value=10 Score=46.72 Aligned_cols=45 Identities=20% Similarity=0.164 Sum_probs=40.1
Q ss_pred eeeeCCEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHH
Q 006862 420 RYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNA 468 (628)
Q Consensus 420 RYr~GDvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a 468 (628)
+||+||.+|..- .-.++|.||.++.++++|-++.=.++.++|..-
T Consensus 455 ~y~tgD~gr~l~----ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 455 IYRTGDNGRSLK----NGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred cccccccceeec----CCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 499999999872 457999999999999999999999999998764
No 136
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=40.91 E-value=17 Score=42.02 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=21.5
Q ss_pred CcceeecccccCCCcccccccCHHHHH
Q 006862 100 PISEFLTSSGTSGGERKLMPTIEEELE 126 (628)
Q Consensus 100 pi~~f~~TSGTT~G~~K~IP~t~~~l~ 126 (628)
.+.+...||||| |+||-+..|...+.
T Consensus 194 d~a~i~yTSGTT-G~PKgV~~sh~~l~ 219 (612)
T PRK12476 194 DVSHLQYTSGST-RPPVGVEITHRAVG 219 (612)
T ss_pred ceEEEEeCCCCC-CCCceEEeeHHHHH
Confidence 344778899999 89999999997653
No 137
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=37.35 E-value=26 Score=30.89 Aligned_cols=38 Identities=21% Similarity=0.450 Sum_probs=29.2
Q ss_pred eEeeeeCCEEEEe---cccCCCCEEEEeeecCceEecccee
Q 006862 418 LYRYRVGDVLRVA---GFKNKAPQFNFICRKNVVLSIDSDK 455 (628)
Q Consensus 418 LyRYr~GDvv~v~---gf~~~~P~~~f~gR~~~~l~i~gek 455 (628)
|.-|..||.|-++ +++...|-=+|.||++.++...|.-
T Consensus 30 l~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g~a 70 (98)
T COG2139 30 LQEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRGRA 70 (98)
T ss_pred HhhccCCCEEEEEeCcccccCCCCccccCcceEEEeccCCE
Confidence 6668899999877 5566677778889998888777743
No 138
>PRK05850 acyl-CoA synthetase; Validated
Probab=34.16 E-value=25 Score=40.07 Aligned_cols=26 Identities=8% Similarity=0.020 Sum_probs=21.3
Q ss_pred CcceeecccccCCCcccccccCHHHHH
Q 006862 100 PISEFLTSSGTSGGERKLMPTIEEELE 126 (628)
Q Consensus 100 pi~~f~~TSGTT~G~~K~IP~t~~~l~ 126 (628)
-+.++..||||| |+||-+..+...+-
T Consensus 161 d~a~i~~TSGTT-G~PKgV~~sh~~l~ 186 (578)
T PRK05850 161 STAYLQYTSGST-RTPAGVMVSHRNVI 186 (578)
T ss_pred CeEEEEeCCCCC-CCCceEEEeHHHHH
Confidence 345788899999 89999999987653
No 139
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=32.08 E-value=1.3e+02 Score=24.79 Aligned_cols=49 Identities=24% Similarity=0.132 Sum_probs=36.6
Q ss_pred eeccHHHHHHHHHHHHhhcCC-CCceEEeEEEeecCCCCCceEEEEEEEee
Q 006862 454 DKTDEVELQNAVKNAVNHLVP-FDAAVSEYTSYADTTTVPGHYVLYWELSL 503 (628)
Q Consensus 454 ek~~e~~v~~av~~a~~~l~~-~g~~l~eft~~~d~~~~p~~Yvl~~El~~ 503 (628)
++-.|+.+++||.+|.+.++. .+++|.+..+..+. +.-.||.+-+++.|
T Consensus 13 ~~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv~F 62 (66)
T PF07311_consen 13 PKSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKVSF 62 (66)
T ss_dssp SSHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEEEE
Confidence 456689999999999987742 25678888876665 35569998888766
No 140
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=29.04 E-value=40 Score=29.92 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=27.6
Q ss_pred eEeeeeCCEEEEec---ccCCCCEEEEeeecCceEeccce
Q 006862 418 LYRYRVGDVLRVAG---FKNKAPQFNFICRKNVVLSIDSD 454 (628)
Q Consensus 418 LyRYr~GDvv~v~g---f~~~~P~~~f~gR~~~~l~i~ge 454 (628)
|.-|+.||.|-+.+ ++.+.|-=.|-||++.+.++.|.
T Consensus 32 l~~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~ 71 (98)
T PRK04306 32 LQEFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGR 71 (98)
T ss_pred HHhccCCCEEEEEecCceecCCccccccCCCEEEEeecCe
Confidence 44589999998874 23445666888999888888774
No 141
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=28.50 E-value=39 Score=32.62 Aligned_cols=38 Identities=18% Similarity=0.342 Sum_probs=28.9
Q ss_pred eEeeeeCCEEEEec---ccCCCCEEEEeeecCceEecccee
Q 006862 418 LYRYRVGDVLRVAG---FKNKAPQFNFICRKNVVLSIDSDK 455 (628)
Q Consensus 418 LyRYr~GDvv~v~g---f~~~~P~~~f~gR~~~~l~i~gek 455 (628)
|--|+.||+|-+.+ .+.+.|-=.|-||++.+.++.|.-
T Consensus 31 l~~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~~A 71 (160)
T PTZ00189 31 LTTFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTPRA 71 (160)
T ss_pred HHHccCCCEEEEEecCCeecCCCcccccCCCeEEEeecCeE
Confidence 44589999998885 445567778889999888887743
No 142
>PRK08162 acyl-CoA synthetase; Validated
Probab=26.68 E-value=33 Score=38.64 Aligned_cols=22 Identities=23% Similarity=0.173 Sum_probs=18.8
Q ss_pred eeecccccCCCcccccccCHHHH
Q 006862 103 EFLTSSGTSGGERKLMPTIEEEL 125 (628)
Q Consensus 103 ~f~~TSGTT~G~~K~IP~t~~~l 125 (628)
....||||| |+||-+.+|...+
T Consensus 186 ~i~~TSGTT-G~PKgv~~t~~~~ 207 (545)
T PRK08162 186 ALNYTSGTT-GNPKGVVYHHRGA 207 (545)
T ss_pred EEEeCCCCC-CCCcEEEEecHHH
Confidence 677899999 8999999998643
No 143
>cd03483 MutL_Trans_MLH1 MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1). This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. MLH1 forms heterodimers with PMS2, PMS1 and MLH3. These three complexes have distinct functions in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Roles for hMLH1-hPMS1 or hMLH1-hMLH3 in MMR have not been established. Cells lacking hMLH1 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hMLH1 causes predisposition to HNPCC, Muir-Torre syndrome and Turcot syndrome (HNPCC variant). Mutation in hMLH1 accounts for a large fraction of HNPCC families.
Probab=26.21 E-value=1.4e+02 Score=27.43 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=36.7
Q ss_pred CEEEEecccCCCCEEEEeeecCceEeccceeccHHHHHHHHHHHHhh
Q 006862 425 DVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNH 471 (628)
Q Consensus 425 Dvv~v~gf~~~~P~~~f~gR~~~~l~i~gek~~e~~v~~av~~a~~~ 471 (628)
+-+++.||- ..|.+. .+|..+++-++|.-+....+.+||.++-..
T Consensus 30 ~~~~i~G~i-s~p~~~-~~~~~q~~fVNgR~V~~~~l~~aI~~~Y~~ 74 (127)
T cd03483 30 LGFKVKGLI-SNANYS-KKKIIFILFINNRLVECSALRRAIENVYAN 74 (127)
T ss_pred CcEEEEEEE-cCchhc-CCCceEEEEEcCCEecCHHHHHHHHHHHHH
Confidence 558888885 456666 677778899999999999999999998653
No 144
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=23.85 E-value=66 Score=25.29 Aligned_cols=19 Identities=21% Similarity=0.716 Sum_probs=14.6
Q ss_pred eeeCCEEEEecccCCCCEEEEe
Q 006862 421 YRVGDVLRVAGFKNKAPQFNFI 442 (628)
Q Consensus 421 Yr~GDvv~v~gf~~~~P~~~f~ 442 (628)
|++||+|+..+ ..|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 67999999994 67766554
No 145
>PLN00190 60S ribosomal protein L21; Provisional
Probab=22.93 E-value=58 Score=31.38 Aligned_cols=38 Identities=18% Similarity=0.375 Sum_probs=29.0
Q ss_pred eEeeeeCCEEEEec---ccCCCCEEEEeeecCceEecccee
Q 006862 418 LYRYRVGDVLRVAG---FKNKAPQFNFICRKNVVLSIDSDK 455 (628)
Q Consensus 418 LyRYr~GDvv~v~g---f~~~~P~~~f~gR~~~~l~i~gek 455 (628)
|.-|+.||+|-+.+ ++.+.|-=.|-||++.+.++.|.-
T Consensus 31 l~~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~~A 71 (158)
T PLN00190 31 LRTFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTKRA 71 (158)
T ss_pred HHHhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecCcE
Confidence 44599999999885 345567668899999988887743
No 146
>COG5475 Uncharacterized small protein [Function unknown]
Probab=22.22 E-value=1e+02 Score=24.56 Aligned_cols=24 Identities=17% Similarity=0.372 Sum_probs=19.6
Q ss_pred eeeCCEEEEecccCCCCEEEEeeecCc
Q 006862 421 YRVGDVLRVAGFKNKAPQFNFICRKNV 447 (628)
Q Consensus 421 Yr~GDvv~v~gf~~~~P~~~f~gR~~~ 447 (628)
|.+||+|++. ...|++.+.+-..|
T Consensus 5 FstgdvV~lK---sGGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLK---SGGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEee---cCCceEEEeccccC
Confidence 6799999999 47899988876653
No 147
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=21.21 E-value=2.2e+02 Score=27.06 Aligned_cols=56 Identities=25% Similarity=0.313 Sum_probs=36.5
Q ss_pred cCCCceEEEEEee--ccceEee----eeCCEEEEecccCCCCEEEEeeec----CceEeccceeccHH
Q 006862 402 VKLGQEYELVVTT--YAGLYRY----RVGDVLRVAGFKNKAPQFNFICRK----NVVLSIDSDKTDEV 459 (628)
Q Consensus 402 ve~G~~YeLVvTt--~~GLyRY----r~GDvv~v~gf~~~~P~~~f~gR~----~~~l~i~gek~~e~ 459 (628)
|.+|+.-+|.||. .+|-+++ ..+|+ ||+- .-..|+|+|.+.. +.++.-.-||++..
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dv-Rvvk-di~pPRI~l~Y~L~d~~G~vi~~g~e~L~Dm 112 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDV-RVVK-DIYPPRIELSYTLTDADGKVIKQGEEKLKDM 112 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcE-EEEc-cCCCCcEEEEEEEECCCCcEEEecceEEecc
Confidence 7899999999998 6897776 44554 5552 1346888776543 44555545555543
No 148
>PRK13390 acyl-CoA synthetase; Provisional
Probab=20.74 E-value=48 Score=36.86 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=22.8
Q ss_pred eEEEEcCCcc---chHHHHHhhcCCCceecccccccccc
Q 006862 307 VDVIVTGTMS---QYIPILDYYSNGLPLVCTMYASSECY 342 (628)
Q Consensus 307 i~~~~~G~~~---~y~~~l~~~~~g~p~~~~~Y~aSEg~ 342 (628)
++.+++|+.. ...+.+++.+ +.+++ ..||+||+.
T Consensus 272 l~~v~~~g~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~ 308 (501)
T PRK13390 272 LRAVIHAAAPCPVDVKHAMIDWL-GPIVY-EYYSSTEAH 308 (501)
T ss_pred hheEEEcCCCCCHHHHHHHHHhc-CCcee-eeecccccC
Confidence 5666666642 2334555666 67888 899999984
No 149
>COG2026 RelE Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]
Probab=20.71 E-value=1.3e+02 Score=25.89 Aligned_cols=25 Identities=24% Similarity=0.454 Sum_probs=16.6
Q ss_pred eeccceEeeeeCCEEEEecccCCCC
Q 006862 413 TTYAGLYRYRVGDVLRVAGFKNKAP 437 (628)
Q Consensus 413 Tt~~GLyRYr~GDvv~v~gf~~~~P 437 (628)
.-..|+||+|+||-.-+--+.....
T Consensus 48 ~~~~~~~R~RiG~YRlIy~i~d~~~ 72 (90)
T COG2026 48 KGLSGKYRLRIGDYRLIYEIDDETL 72 (90)
T ss_pred cCCCCeEEEEecCEEEEEEEECCce
Confidence 3467899999999554444444444
No 150
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.63 E-value=3.8e+02 Score=23.21 Aligned_cols=58 Identities=9% Similarity=0.112 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceEEEEEEEeeCCCCCCCcchHHHHHHHHHHHh
Q 006862 458 EVELQNAVKNAVNHLVPFDAAVSEYTSYADTTTVPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEESL 525 (628)
Q Consensus 458 e~~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~~Yvl~~El~~~~~~~~~~~~l~~~~~~ld~~L 525 (628)
+..+..++..+. ..|+.+...-+++. ...++.|.+|++++. . . ...+.+....|.+.+
T Consensus 25 pGsL~~vL~~Fa----~~~INLt~IeSRP~-~~~~~~Y~FfVDieg--~--~-~~~~~~~l~~L~~~~ 82 (90)
T cd04931 25 VGALAKVLRLFE----EKDINLTHIESRPS-RLNKDEYEFFINLDK--K--S-APALDPIIKSLRNDI 82 (90)
T ss_pred CcHHHHHHHHHH----HCCCCEEEEEeccC-CCCCceEEEEEEEEc--C--C-CHHHHHHHHHHHHHh
Confidence 455777776665 36888877766653 346689999999973 2 1 234444455555544
Done!