Query 006863
Match_columns 628
No_of_seqs 309 out of 1845
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:57:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006863.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006863hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyz_A Beta-D-glucoside glucoh 100.0 5E-133 2E-137 1144.5 47.2 560 8-624 105-711 (713)
2 3abz_A Beta-glucosidase I; gly 100.0 5E-133 2E-137 1160.0 47.2 545 8-623 94-834 (845)
3 2x41_A Beta-glucosidase; hydro 100.0 1E-131 5E-136 1138.5 43.1 540 8-623 111-711 (721)
4 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 7E-101 2E-105 879.5 34.4 432 7-488 153-619 (822)
5 1x38_A Beta-D-glucan exohydrol 100.0 2.4E-99 8E-104 854.8 35.2 431 8-483 139-601 (602)
6 3bmx_A Uncharacterized lipopro 100.0 5.6E-90 1.9E-94 783.0 31.3 414 8-485 168-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 5.3E-64 1.8E-68 551.0 25.0 362 8-426 142-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 6.5E-52 2.2E-56 436.0 15.6 200 8-226 125-340 (351)
9 2oxn_A Beta-hexosaminidase; TI 100.0 4.2E-45 1.4E-49 382.7 5.4 193 8-217 109-309 (340)
10 4gvf_A Beta-hexosaminidase; TI 100.0 1.1E-44 3.7E-49 380.0 8.0 193 8-217 112-315 (349)
11 4g6c_A Beta-hexosaminidase 1; 100.0 4.7E-44 1.6E-48 375.4 9.1 189 8-216 124-322 (348)
12 3idu_A Uncharacterized protein 96.9 0.0026 9E-08 56.6 8.2 50 528-586 34-84 (127)
13 2l0d_A Cell surface protein; s 96.2 0.013 4.6E-07 51.0 7.8 61 528-610 20-82 (114)
14 2kut_A Uncharacterized protein 96.1 0.0034 1.2E-07 55.3 3.7 55 528-586 17-73 (122)
15 3isy_A Bsupi, intracellular pr 92.8 0.45 1.5E-05 41.6 8.7 67 528-610 19-99 (120)
16 4ep8_B Urease subunit beta; al 89.1 0.54 1.8E-05 39.1 5.1 52 529-584 20-83 (101)
17 2e6j_A Hydin protein; PAPD, st 87.5 1.8 6.1E-05 36.7 7.9 61 528-594 27-87 (112)
18 1yew_A Particulate methane mon 86.9 1.4 4.9E-05 45.2 7.8 55 528-586 265-336 (382)
19 1w8o_A Bacterial sialidase; 3D 86.7 1.7 5.7E-05 48.4 9.2 102 471-612 337-440 (601)
20 4ac7_B Urease subunit beta; hy 85.9 1.1 3.7E-05 38.9 5.4 52 529-584 26-89 (126)
21 4ubp_B Protein (urease (chain 85.9 1.1 3.7E-05 38.9 5.4 52 529-584 26-89 (126)
22 1cuo_A Protein (azurin ISO-2); 84.8 1.4 4.8E-05 39.0 5.8 15 571-585 86-100 (129)
23 2x3c_A Toxic extracellular end 83.0 2.1 7.2E-05 44.3 7.2 62 528-591 37-116 (343)
24 2ys4_A Hydrocephalus-inducing 81.4 2.2 7.4E-05 37.0 5.6 57 528-595 42-98 (122)
25 3qbt_B Inositol polyphosphate 79.8 2.9 9.8E-05 37.4 6.0 55 528-586 44-100 (140)
26 2iaa_C Azurin; quinoprotein, t 78.1 3.4 0.00012 36.3 5.8 54 530-585 27-99 (128)
27 3rfr_A PMOB; membrane, oxidore 76.6 4.7 0.00016 41.8 7.1 54 528-586 299-368 (419)
28 2ccw_A Azurin II, AZN-2; elect 75.2 4.6 0.00016 35.5 5.9 15 571-585 86-100 (129)
29 3ay2_A Lipid modified azurin p 74.4 2.8 9.7E-05 38.7 4.4 15 571-585 125-139 (167)
30 2qsv_A Uncharacterized protein 73.5 8.3 0.00028 37.0 7.8 50 528-586 135-185 (220)
31 3fsa_A Azurin; copper, cupredo 71.7 7.2 0.00024 34.2 6.1 55 530-585 28-100 (125)
32 3qga_A UREA2, fusion of urease 71.5 4.1 0.00014 38.7 4.8 52 529-584 125-188 (225)
33 1e9y_A Urease subunit alpha; h 69.2 4 0.00014 39.1 4.2 51 530-584 126-188 (238)
34 1nwp_A Azurin; electron transp 66.1 10 0.00034 33.3 6.0 15 571-585 86-100 (128)
35 3kmh_A D-lyxose isomerase; cup 64.2 5.4 0.00019 38.7 4.1 57 534-596 130-196 (246)
36 2aan_A Auracyanin A; cupredoxi 63.3 16 0.00054 32.1 6.9 18 569-586 98-115 (139)
37 1xf1_A C5A peptidase, SCP; hyd 60.3 7.1 0.00024 45.9 5.1 58 528-586 500-564 (926)
38 4dzg_A PLIG; lysozyme inhibito 58.5 13 0.00043 31.9 5.1 43 571-613 35-95 (114)
39 3qis_A Inositol polyphosphate 45.6 47 0.0016 34.3 8.0 57 528-589 47-105 (366)
40 2cal_A Rusticyanin; iron respi 43.9 46 0.0016 29.9 6.6 54 530-584 70-128 (154)
41 4gy7_A Urease; JACK bean, hydr 43.9 19 0.00066 41.7 5.0 51 529-583 151-213 (840)
42 4ay0_A Chaperone protein CAF1M 42.0 60 0.002 31.0 7.5 53 530-586 29-84 (218)
43 2qsv_A Uncharacterized protein 40.5 1.5E+02 0.0052 27.9 10.2 52 528-590 20-72 (220)
44 2co7_B SAFB chaperone, putativ 40.0 56 0.0019 31.2 7.0 53 530-586 29-82 (221)
45 4hci_A Cupredoxin 1; structura 39.7 53 0.0018 26.7 5.9 18 569-586 60-77 (100)
46 3q48_A Chaperone CUPB2; IG fol 35.9 94 0.0032 30.4 8.0 54 530-585 45-102 (257)
47 4djm_A DRAB; chaperone, PILI; 35.5 77 0.0026 30.7 7.2 52 530-585 39-91 (239)
48 1iby_A Nitrosocyanin; RED copp 34.8 42 0.0014 27.9 4.6 41 530-586 47-87 (112)
49 4hs4_A Chromate reductase; tri 34.1 57 0.002 30.4 5.9 54 325-389 62-120 (199)
50 4g9s_B Inhibitor of G-type lys 32.9 90 0.0031 26.2 6.4 12 600-611 78-90 (111)
51 3hrz_B Cobra venom factor; ser 32.7 1.4E+02 0.0048 28.9 8.6 59 528-590 97-157 (252)
52 1g43_A Scaffolding protein; be 31.7 17 0.00059 33.1 1.6 34 565-599 97-132 (160)
53 4b9f_A Cellulosomal-scaffoldin 30.9 24 0.00083 31.8 2.5 35 565-600 94-128 (152)
54 3lcm_A SMU.1420, putative oxid 29.4 84 0.0029 29.0 6.1 55 325-390 62-131 (196)
55 2lv4_A Putative outer membrane 28.6 1.4E+02 0.005 25.7 6.7 65 560-625 48-134 (146)
56 3zqx_A Cellulose 1,4-beta-cell 27.6 14 0.00049 33.1 0.3 35 565-600 81-116 (146)
57 1l4i_A SFAE protein; periplasm 27.1 1.4E+02 0.0046 28.1 7.2 51 530-583 17-68 (206)
58 2q3z_A Transglutaminase 2; tra 26.6 63 0.0022 36.3 5.3 57 528-586 488-548 (687)
59 3p0r_A Azoreductase; structura 26.1 78 0.0027 29.7 5.3 54 327-391 83-151 (211)
60 4h7p_A Malate dehydrogenase; s 25.9 17 0.00059 37.4 0.6 56 332-393 96-155 (345)
61 1g0d_A Protein-glutamine gamma 25.7 77 0.0026 35.6 5.7 57 528-586 487-546 (695)
62 1klf_A FIMC chaperone, chapero 25.4 1.4E+02 0.0048 28.0 6.9 52 530-584 17-69 (205)
63 1rli_A Trp repressor binding p 25.2 1.3E+02 0.0043 26.9 6.5 38 326-374 61-98 (184)
64 3zuc_A Cellulosomal scaffoldin 24.6 25 0.00087 31.8 1.4 35 565-600 89-125 (153)
65 2gim_A Plastocyanin; beta shee 24.6 67 0.0023 26.1 4.0 18 567-584 62-79 (106)
66 3gfu_C Chaperone protein FAEE; 24.6 1.7E+02 0.0058 28.0 7.4 53 530-585 17-71 (224)
67 5mdh_A Malate dehydrogenase; o 24.1 40 0.0014 34.4 3.0 56 332-393 75-134 (333)
68 3lab_A Putative KDPG (2-keto-3 24.0 1.1E+02 0.0036 29.3 5.7 57 99-179 78-136 (217)
69 2hr0_B Complement C3 alpha' ch 24.0 1.6E+02 0.0056 34.2 8.6 57 528-586 96-154 (915)
70 2hpv_A FMN-dependent NADH-azor 23.8 90 0.0031 28.8 5.2 37 327-374 85-121 (208)
71 3ha2_A NADPH-quinone reductase 23.7 1.4E+02 0.0049 27.2 6.5 57 324-391 39-105 (177)
72 2x0j_A Malate dehydrogenase; o 23.1 15 0.0005 37.1 -0.6 54 333-393 66-123 (294)
73 3vta_A Cucumisin; subtilisin-l 23.0 2.1E+02 0.0071 31.7 8.8 78 528-624 538-618 (621)
74 3u7i_A FMN-dependent NADH-azor 22.8 1E+02 0.0035 29.2 5.5 38 327-375 85-122 (223)
75 1t5b_A Acyl carrier protein ph 22.2 1.1E+02 0.0037 27.8 5.4 36 328-374 78-113 (201)
76 3vku_A L-LDH, L-lactate dehydr 21.9 40 0.0014 34.3 2.4 57 332-393 72-130 (326)
77 2l8a_A Endoglucanase; carbohyd 21.8 23 0.0008 31.8 0.6 36 565-601 86-122 (149)
78 3ldh_A Lactate dehydrogenase; 21.5 38 0.0013 34.6 2.2 53 334-393 87-143 (330)
79 3fvw_A Putative NAD(P)H-depend 20.9 1.3E+02 0.0044 27.6 5.6 40 325-375 56-95 (192)
80 1vjj_A Protein-glutamine gluta 20.7 1E+02 0.0036 34.6 5.6 57 528-586 497-556 (692)
81 3svl_A Protein YIEF; E. coli C 20.5 1.7E+02 0.0059 26.8 6.4 40 325-375 61-100 (193)
No 1
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=4.7e-133 Score=1144.45 Aligned_cols=560 Identities=25% Similarity=0.379 Sum_probs=466.0
Q ss_pred ccee-eCcccc-ccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCceeeccc
Q 006863 8 GLTY-WSPNVN-IFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNAR 85 (628)
Q Consensus 8 Gi~~-~~P~~d-i~r~p~~gr~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~ 85 (628)
|+|+ |+|++| |.|||+|||++|+|||||+|+++|+.|+|+|||++ ||+||+|||||||++. .|...++.
T Consensus 105 Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~-----gV~a~~KHF~g~g~e~----~r~~~~~~ 175 (713)
T 3zyz_A 105 GIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSV-----GVQATAKHYILNEQEL----NRETISSN 175 (713)
T ss_dssp TCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHT-----TCEEEEEEETTCCCST----TTTTCEEC
T ss_pred CCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhC-----CeEEEEecCccCCccc----cCccccCc
Confidence 9999 999999 88999999999999999999999999999999998 7999999999999765 35566788
Q ss_pred CCHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhccccccCChH
Q 006863 86 VSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPE 165 (628)
Q Consensus 86 ~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~ 165 (628)
+++++|+|+||+||+++|++| +.+||||||++||+|||+|++||++|||+||||+|+|||||+++.
T Consensus 176 v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~------------- 241 (713)
T 3zyz_A 176 PDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNAQH------------- 241 (713)
T ss_dssp CCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTCCC-------------
T ss_pred CCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCCccCcCCHHHHHHHHHHHcCCCEEEEecCccHH-------------
Confidence 999999999999999999976 899999999999999999999999999999999999999998642
Q ss_pred HHHHHHHHcCCCcCCch--------hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCCCCCCCCCCCC
Q 006863 166 EAAADAIKAGLDLDCGP--------FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVC 237 (628)
Q Consensus 166 ~a~~~al~AG~D~~~~~--------~~~~~l~~av~~G~i~~~~ld~av~RIL~~k~~~Glf~~~p~~~~~~~~~~~~v~ 237 (628)
++++|++||+||+|+. ++.+.|.+||++|+|++++||+||+|||++|+++|+|+ +++.. ... ....
T Consensus 242 -~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RIL~~k~~lg~~~-~~~~~--~~~--~~~~ 315 (713)
T 3zyz_A 242 -TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTSRVDDMVTRILAAWYLTGQDQ-AGYPS--FNI--SRNV 315 (713)
T ss_dssp -CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTS-TTCCC--CCT--TSCC
T ss_pred -HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCcc-cCCCC--ccc--cccc
Confidence 3478999999999963 23478999999999999999999999999999999997 44321 111 1123
Q ss_pred CHHHHHHHHHHHhhcceeccCCCCCCCCcCCCCceEEEEccCCcccc-----------------ccccccc--cCCCCcC
Q 006863 238 TPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTV-----------------TMIGNYA--GVACGYT 298 (628)
Q Consensus 238 ~~~~~~la~~~A~eSivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~-----------------~~~G~~~--g~~~~~~ 298 (628)
+++|+++++++|++|||||||++++|||++. +||+||||+|+... ...|+++ ..+++.+
T Consensus 316 ~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~ 393 (713)
T 3zyz_A 316 QGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFV 393 (713)
T ss_dssp CTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCC
T ss_pred CHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCccccccccccccccccccccCceecccCCCCcCcCCCC
Confidence 6799999999999999999999999999864 79999999987421 1123233 2456788
Q ss_pred CHHHHHHHhhcceeecccCccccCCcccHHHHHHHhhcCCEEEEEEeCCCccccccC--------CCCCCCCChhHHHHH
Q 006863 299 TPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFI--------DRAGLLLPGRQQELV 370 (628)
Q Consensus 299 t~~e~l~~~~~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~--------Dr~~l~L~~~q~~li 370 (628)
+++++|+++... .|+. +.......+++|+++|+++|++||++|.. ++||. ||.+|.||+.|.+||
T Consensus 394 t~~~~i~~~~~~---~g~~-v~~~~~~~~~~a~~~A~~aDv~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li 466 (713)
T 3zyz_A 394 APYDAINTRASS---QGTQ-VTLSNTDNTSSGASAARGKDVAIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNALV 466 (713)
T ss_dssp CHHHHHHHHHHT---TTCE-EEEECSCCHHHHHHHHTTCSEEEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHH
T ss_pred CHHHHHHHHhcc---CCeE-EEEeCCccHHHHHHHhhcCCEEEEEeccc---CCCCccccccCCCCcccccCChhHHHHH
Confidence 999999987421 1111 00111335789999999999999999854 46666 999999999999999
Q ss_pred HHHHHhcCCCEEEEEecCceeee-cccccCCCccEEEEecCCCchhHHHHHHHHhCCCCCCeecCcccCcccccCCCCCc
Q 006863 371 SRVAKASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMT 449 (628)
Q Consensus 371 ~~v~~~~~k~vVvVl~~g~P~~l-~~~~~~~~v~AiL~a~~~G~~~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~ 449 (628)
++|++. ++|+|||+++|+|++| +|+ +.++++|||++|||||++|+||||||||++|||||||+|| |++. +|+|..
T Consensus 467 ~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~aw~pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~-~d~p~~ 542 (713)
T 3zyz_A 467 QAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVWAGLPSQESGNALVDVLWGDVSPSGKLVYTI-AKSP-NDYNTR 542 (713)
T ss_dssp HHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEECCCCGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCG-GGSSCC
T ss_pred HHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEEcCCCCchhhheehhhhcCCcCCCccCccee-cCCh-hhCCCc
Confidence 999975 6799999999999999 676 4578999999999999999999999999999999999997 8876 778843
Q ss_pred cccccccCCCCC---CcccccCC---CcccccCcCCCCCCceeCCCccCCCccccccccccccccccccccccccc-ccC
Q 006863 450 DMRMRAARGYPG---RTYRFYKG---PVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVA-HTN 522 (628)
Q Consensus 450 ~~~~~~~~~~~~---~~Yr~~~~---~~~ypFG~GLSYTtF~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 522 (628)
. +..+...|.+ ++||||+. +|+||||||||||||+||++++++.... . +....+..+ ...
T Consensus 543 ~-~~~~~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF~ys~l~~~~~~~~---~---------~~~~~~~~gg~~~ 609 (713)
T 3zyz_A 543 I-VSGGSDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKFNYSRLSVLSTAKS---G---------PATGAVVPGGPSD 609 (713)
T ss_dssp C-CCSSEECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCEEEEEEEEEECCCC---E---------ECCSCEETTEETT
T ss_pred c-ccCCccccCCCCccCceeccCCCCceeecCCCCCCcccEEEeeeEecccccc---C---------ccccccccccccc
Confidence 1 1111223433 58999985 7999999999999999999987431000 0 000000000 000
Q ss_pred CCCCceEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEecCCCCeeEEeCC-CCEE
Q 006863 523 CNDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF-GIRR 600 (628)
Q Consensus 523 ~~~~~~~~vsv~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~-~~~~ 600 (628)
+.+. .++|+|+|||||+++|+||||||+++|.+. .+|.|+||||+||+|+||||++|+|+|++ ++|++||.. ++|+
T Consensus 610 ~~~~-~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ 687 (713)
T 3zyz_A 610 LFQN-VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWV 687 (713)
T ss_dssp TTSE-EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEE
T ss_pred ccCC-eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEE
Confidence 1122 699999999999999999999999999887 89999999999999999999999999999 999999986 7899
Q ss_pred ecCeEEEEEEeCCCCeeEEEEEEe
Q 006863 601 IPMGEHSLHIGDLKHSISLQANLE 624 (628)
Q Consensus 601 ~~~G~y~i~vG~ss~~~~~~~~~~ 624 (628)
+|+|+|+|+||.||++++++.+++
T Consensus 688 ve~G~y~v~vG~sS~d~~l~~~~~ 711 (713)
T 3zyz_A 688 VPSGSFGISVGASSRDIRLTSTLS 711 (713)
T ss_dssp ECCEEEEEEEESSSSCEEEEEEEE
T ss_pred EcCceEEEEEECCCCCcceeEEEE
Confidence 999999999999999999987764
No 2
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=4.5e-133 Score=1159.96 Aligned_cols=545 Identities=31% Similarity=0.477 Sum_probs=474.9
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCceeecccC
Q 006863 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (628)
Q Consensus 8 Gi~~-~~P~~di~r~p~~gr~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (628)
|+|+ |+|++||+|||+|||++|||||||+|+++|+.|+|+|||++ ||+||+||||||+++ .+|+..++.+
T Consensus 94 Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-----gV~a~~KHFpg~g~e----~~r~~~~~~v 164 (845)
T 3abz_A 94 NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-----GIAATVKHFVCNDLE----DQRFSSNSIV 164 (845)
T ss_dssp TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCBCEEEEETTCCCC----TTTTTCEEEC
T ss_pred CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-----CeeEEeeccccCCcc----cCCccccCCC
Confidence 9999 99999999999999999999999999999999999999998 799999999999865 3567778889
Q ss_pred CHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhccccccCChHH
Q 006863 87 SKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEE 166 (628)
Q Consensus 87 ~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~~ 166 (628)
++++|+|+||+||+++|+++++.+||||||++||+|||+|++||++|||+||||+|+|||||+++.
T Consensus 165 ~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~-------------- 230 (845)
T 3abz_A 165 SERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY-------------- 230 (845)
T ss_dssp CHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC--------------
T ss_pred CHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH--------------
Confidence 999999999999999997445999999999999999999999999999999999999999998763
Q ss_pred HHHHHHHcCCCcCCc-h--hhH-HHHHHHHHCCC-CCHHHHHHHhhhhHHHHHHhC----CCCCCCCCCCCCCCCCCCCC
Q 006863 167 AAADAIKAGLDLDCG-P--FLA-IHTEGAVRGGL-LREEDVNLALAYTITVQMRLG----MFDGEPSAQPFGNLGPRDVC 237 (628)
Q Consensus 167 a~~~al~AG~D~~~~-~--~~~-~~l~~av~~G~-i~~~~ld~av~RIL~~k~~~G----lf~~~p~~~~~~~~~~~~v~ 237 (628)
++++|++||+||+|+ + ++. +.|.+||++|+ |++++||+||+|||++|+++| +|+ +|+..+ ....++
T Consensus 231 ~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~-~p~~~~----~~~~~~ 305 (845)
T 3abz_A 231 TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTG-IVENGP----ESTSNN 305 (845)
T ss_dssp CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHC-CCTTCC----CCCTTC
T ss_pred HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCcccccc-CCccCc----cccccC
Confidence 247899999999996 2 223 48999999999 999999999999999999999 898 554221 122378
Q ss_pred CHHHHHHHHHHHhhcceeccCCCCCCCCcCCCCceEEEEccCCcccccccccccc-CCCCcCCHHHHHHHhh--cceeec
Q 006863 238 TPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAG-VACGYTTPLQGISRYA--KTIHQA 314 (628)
Q Consensus 238 ~~~~~~la~~~A~eSivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~g-~~~~~~t~~e~l~~~~--~~~y~~ 314 (628)
+++|+++|+++|++|||||||++++|||++ .+||+||||+|+....++|+++. .+.+.+|++++|+++. .+.|..
T Consensus 306 ~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y~~ 383 (845)
T 3abz_A 306 TKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTV 383 (845)
T ss_dssp SHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEEEC
T ss_pred CHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCcccCCcCCHHHHHHHhhcCceeecc
Confidence 999999999999999999999999999975 47999999999998766665544 4678899999999874 244554
Q ss_pred ccCcc------------------------------------c--------------------------------------
Q 006863 315 GCFGV------------------------------------A-------------------------------------- 320 (628)
Q Consensus 315 g~~~~------------------------------------~-------------------------------------- 320 (628)
||... .
T Consensus 384 G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (845)
T 3abz_A 384 GAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTL 463 (845)
T ss_dssp CCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEE
T ss_pred ccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccceeecccccccccccccceeEEE
Confidence 44200 0
Q ss_pred ---------------------------------------------------------------------c----------
Q 006863 321 ---------------------------------------------------------------------C---------- 321 (628)
Q Consensus 321 ---------------------------------------------------------------------~---------- 321 (628)
.
T Consensus 464 ~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~ 543 (845)
T 3abz_A 464 TGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVG 543 (845)
T ss_dssp EEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSS
T ss_pred EEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEeccCCcccccc
Confidence 0
Q ss_pred --------------CC-cccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEe
Q 006863 322 --------------NG-NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLM 386 (628)
Q Consensus 322 --------------~~-~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~~~~k~vVvVl~ 386 (628)
.+ ...+++|+++|++||+||||+|.+...++||.||.+|.||+.|.+||++|+++ ++|||||++
T Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~ 622 (845)
T 3abz_A 544 EFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIVNQ 622 (845)
T ss_dssp CCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEEEE
T ss_pred cccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHh-CCCEEEEEe
Confidence 00 12356788999999999999999999999999999999999999999999975 679999999
Q ss_pred cCceeeecccccCCCccEEEEecCCCchhHHHHHHHHhCCCCCCeecCcccCcccccCCCCCccccccc---cCCCCC--
Q 006863 387 CGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRA---ARGYPG-- 461 (628)
Q Consensus 387 ~g~P~~l~~~~~~~~v~AiL~a~~~G~~~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~---~~~~~~-- 461 (628)
+|+|++|+|+ ++++|||++||||||+|+||||||||++|||||||+|| |++. +|+|.++ ++.. ...|.+
T Consensus 623 sG~pv~m~w~---~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~-p~~~-~d~P~~~-~~~~~~g~~~y~eg~ 696 (845)
T 3abz_A 623 SGTPVEFPWL---EDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSW-PFKL-QDNPAFL-NFKTEFGRVIYGEDI 696 (845)
T ss_dssp CSSCCCCTTG---GGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCB-CSSG-GGSTTTT-SCSCBTTEEECTTTT
T ss_pred CCCcccCcch---hccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceee-eCch-hhCCccc-cCCCCCCceeccCCc
Confidence 9999999997 37999999999999999999999999999999999997 8887 7888643 2111 111222
Q ss_pred -CcccccC---CCcccccCcCCCCCCceeC--CCccCCCcccccccccccccccccccccccccccCCCCCceEEEEEEE
Q 006863 462 -RTYRFYK---GPVVFPFGHGMSYTTFAHT--LSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDI 535 (628)
Q Consensus 462 -~~Yr~~~---~~~~ypFG~GLSYTtF~~s--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsv~V 535 (628)
.+||||+ .+|+||||||||||||+|| +++++ +. .++|+|+|
T Consensus 697 ~vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~--------------------------------~~-~~~v~v~V 743 (845)
T 3abz_A 697 FVGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT--------------------------------DD-KIAISVDV 743 (845)
T ss_dssp CCTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC--------------------------------SS-EEEEEEEE
T ss_pred cCCCcchhcCCCceeecccCCCcceeEEEeccccccc--------------------------------CC-eEEEEEEE
Confidence 3699997 5899999999999999999 88741 11 68999999
Q ss_pred EeCC-CCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEec-CCCCeeEEeCC-CCEEecCeEEEEEEe
Q 006863 536 KNTG-DMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH-VCKHLSVVDKF-GIRRIPMGEHSLHIG 611 (628)
Q Consensus 536 tNtG-~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~-~~~~ls~~d~~-~~~~~~~G~y~i~vG 611 (628)
|||| +++|+||||||+++|.++ .+|.|+|+||+||+|+||||++|+|+|+ . ++|++||.+ ++|++|+|+|+|+||
T Consensus 744 ~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG 822 (845)
T 3abz_A 744 KNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVG 822 (845)
T ss_dssp EECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEE
T ss_pred EECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEE
Confidence 9999 999999999999999876 8999999999999999999999999999 8 899999996 789999999999999
Q ss_pred CCCCeeEEEEEE
Q 006863 612 DLKHSISLQANL 623 (628)
Q Consensus 612 ~ss~~~~~~~~~ 623 (628)
.||++++++.++
T Consensus 823 ~ss~di~l~~~~ 834 (845)
T 3abz_A 823 TSSDDILSVKEF 834 (845)
T ss_dssp SSTTCEEEEEEE
T ss_pred CCCCCceeEEEE
Confidence 999999877654
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=1.4e-131 Score=1138.52 Aligned_cols=540 Identities=29% Similarity=0.442 Sum_probs=467.4
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCceeecccC
Q 006863 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (628)
Q Consensus 8 Gi~~-~~P~~di~r~p~~gr~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (628)
|+|+ |+|++||+|||+|||++|||||||+|+++|+.|+|+|||++ ||+||+|||||||++. .|...++.+
T Consensus 111 Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~q~~-----gV~a~~KHF~g~g~e~----~r~~~ds~~ 181 (721)
T 2x41_A 111 GVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-----GVGACIKHFVANNQET----NRMVVDTIV 181 (721)
T ss_dssp TCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHTT-----TCBCEEEEETTCCCCT----TTTTCEEEC
T ss_pred CCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHhhhC-----CeEEEecccccCCCCC----CCCcccCCC
Confidence 9999 99999999999999999999999999999999999999998 7999999999999653 577778889
Q ss_pred CHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhccccccCChHH
Q 006863 87 SKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEE 166 (628)
Q Consensus 87 ~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~~ 166 (628)
++++|+|+||+||+++|+++++.+||||||++||+|||+|++||++|||+||||+|+|||||+++.
T Consensus 182 ~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~-------------- 247 (721)
T 2x41_A 182 SERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGD-------------- 247 (721)
T ss_dssp CHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEEECTTCSS--------------
T ss_pred CHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccccCCHHHHHHHHHHhcCCCEEEEccCchHH--------------
Confidence 999999999999999999555999999999999999999999999999999999999999998752
Q ss_pred HHHHHHHcCCCcCCch--hh--H------HHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 006863 167 AAADAIKAGLDLDCGP--FL--A------IHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDV 236 (628)
Q Consensus 167 a~~~al~AG~D~~~~~--~~--~------~~l~~av~~G~i~~~~ld~av~RIL~~k~~~Glf~~~p~~~~~~~~~~~~v 236 (628)
++++|++||+||+|+. .+ . +.|.+||++|+|++++||+||+|||++|+++|+|+ +|.. ...+
T Consensus 248 ~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~Ril~~k~~~gl~~-~~~~-------~~~~ 319 (721)
T 2x41_A 248 NPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFK-NYRY-------SNKP 319 (721)
T ss_dssp CHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSGGGG-TCCC-------CSCC
T ss_pred HHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhCCCC-CCCc-------cccc
Confidence 3688999999999853 22 2 78999999999999999999999999999999999 4431 2346
Q ss_pred CCHHHHHHHHHHHhhcceeccCCCCCCCCcCCCCceEEEEccCCcccccccc-ccccCCCCcCCHHHHHHHh-hc-----
Q 006863 237 CTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIG-NYAGVACGYTTPLQGISRY-AK----- 309 (628)
Q Consensus 237 ~~~~~~~la~~~A~eSivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G-~~~g~~~~~~t~~e~l~~~-~~----- 309 (628)
++++|+++|+++|+||||||||++ +|||++. +||+||||+++....+++ ++...+.+.++++++|+++ ..
T Consensus 320 ~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~kIaviG~~A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~ 396 (721)
T 2x41_A 320 DLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEEL 396 (721)
T ss_dssp CHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CCEEEESGGGTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHHH
T ss_pred CCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CEEEEEecCCcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCce
Confidence 789999999999999999999998 9999863 799999999988765332 2233567789999999987 32
Q ss_pred -ceee-------------cc---cCcc--ccCCcccH--HHHHHHhhcCCEEEEEEeCCCccccccCCCC----CCCCCh
Q 006863 310 -TIHQ-------------AG---CFGV--ACNGNQLI--GAAEVAARQADATVLVMGLDQSIEAEFIDRA----GLLLPG 364 (628)
Q Consensus 310 -~~y~-------------~g---~~~~--~~~~~~~~--~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~----~l~L~~ 364 (628)
+.|. .| +... ...+...+ ++++++|+.+|+|||++|.+ ++|+.||. +|.||.
T Consensus 397 ~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~ 473 (721)
T 2x41_A 397 AKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSD 473 (721)
T ss_dssp HHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCH
T ss_pred EEEEeecccccccccccCCCccceeccccCCCchhhhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCH
Confidence 3455 44 3110 11223455 88899999999999999976 68999999 999999
Q ss_pred hHHHHHHHHH----HhcCCCEEEEEecCceeee-cccccCCCccEEEEecCCCchhHHHHHHHHhCCCCCCeecCcccCc
Q 006863 365 RQQELVSRVA----KASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYP 439 (628)
Q Consensus 365 ~q~~li~~v~----~~~~k~vVvVl~~g~P~~l-~~~~~~~~v~AiL~a~~~G~~~g~AlAdVL~G~~nPsGkLPvT~~p 439 (628)
.|.+||++|+ + .++|+|||+++|+||+| +|. ++++|||++|+||+++|+|+||||||++|||||||+|| |
T Consensus 474 ~q~~LI~~v~~~~~~-~~~~vVVVl~~g~P~~l~~~~---~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p 548 (721)
T 2x41_A 474 DETDLIKTVSREFHE-QGKKVIVLLNIGSPVEVVSWR---DLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-P 548 (721)
T ss_dssp HHHHHHHHHHHHHHH-TTCCEEEEEECSSCCCCTTTG---GGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-E
T ss_pred HHHHHHHHHHHHHHH-hCCCEEEEEecCCceEccchh---hcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-c
Confidence 9999999998 6 46799999999999999 665 57999999999999999999999999999999999997 8
Q ss_pred ccccCCCCCcccccccc-----CCCCC---CcccccC---CCcccccCcCCCCCCceeCCCccCCCcccccccccccccc
Q 006863 440 QDYVSRLPMTDMRMRAA-----RGYPG---RTYRFYK---GPVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKN 508 (628)
Q Consensus 440 ~~~~~~~p~~~~~~~~~-----~~~~~---~~Yr~~~---~~~~ypFG~GLSYTtF~~s~~~~~~~~~~~~~~~~~~~~~ 508 (628)
++. +++|..++...+. ..|.+ .+||||| .+|+||||||||||||+||+++++.
T Consensus 549 ~~~-~~~p~~~~~~~~~~~~~~~~y~eg~~vgYry~d~~~~~plypFG~GLSYTtF~ys~~~~~~--------------- 612 (721)
T 2x41_A 549 RDY-SDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYTTFEYSDLNVSF--------------- 612 (721)
T ss_dssp SSG-GGCSCTTTTCBSTTSCSEEECTTTTCCTHHHHHHHTCCEEECTTCCBCSSCEEEEEEEEEE---------------
T ss_pred Ccc-ccCccccCCCCCccccccccccCCcccccceeecCCCceeeccCCCCCcceeEeeceEeec---------------
Confidence 887 7788722211111 12332 3799997 4799999999999999999987521
Q ss_pred cccccccccccccCCCCCceEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhcccccc-ccCCCCeEEEEEEecC
Q 006863 509 TTISSNAIRVAHTNCNDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKV-HVTAGALQSVRLDIHV 586 (628)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~vsv~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv-~l~pGes~~V~~~l~~ 586 (628)
. +. +++|+|+|||||+++|+||||||+++|.+. .+|.|+|+||+|| +|+||||++|+|+|++
T Consensus 613 ----------~-----~~-~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~ 676 (721)
T 2x41_A 613 ----------D-----GE-TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV 676 (721)
T ss_dssp ----------C-----SS-EEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG
T ss_pred ----------C-----CC-eEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEECH
Confidence 1 12 699999999999999999999999999876 8999999999999 9999999999999999
Q ss_pred CCCeeEEeCCCCEEecCeEEEEEEeCCCCeeEEEEEE
Q 006863 587 CKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQANL 623 (628)
Q Consensus 587 ~~~ls~~d~~~~~~~~~G~y~i~vG~ss~~~~~~~~~ 623 (628)
++|++|| .++|++|+|+|+|+||.||++++++.++
T Consensus 677 -~~l~~~d-~~~~~~e~G~y~v~vG~ss~d~~~~~~~ 711 (721)
T 2x41_A 677 -RDLASFN-GEEWVVEAGEYEVRVGASSRNIKLKGTF 711 (721)
T ss_dssp -GGGCEEC-SSCEEECCEEEEEEEEEETTEEEEEEEE
T ss_pred -HHhcEEc-CCeEEEeCceEEEEEECCCCCcceEEEE
Confidence 9999999 9999999999999999999999776544
No 4
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=6.5e-101 Score=879.45 Aligned_cols=432 Identities=26% Similarity=0.400 Sum_probs=365.0
Q ss_pred cccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCC----CCCCceEEeecccccccCCCCCCCCcee
Q 006863 7 AGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNT----GSRLKVAACCKHYTAYDLDNWNGVDRYH 81 (628)
Q Consensus 7 ~Gi~~-~~P~~di~r~p~~gr~~e~fgEDP~l~~~~a~a~v~GlQ~~~----~~~~~v~a~~KHF~g~g~~~~~~~~r~~ 81 (628)
.|+|+ |+|++||.|||||||++|+|||||+|+++|+.|||+|||+.. .+..||+||+|||||||... .+|+.
T Consensus 153 ~Gin~~~aPvvDv~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~---~~r~~ 229 (822)
T 3rrx_A 153 TGIEWSFAPTVAVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKHFVGDGGTE---RGVDR 229 (822)
T ss_dssp TTCCEEEEEECCCCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSSTTTTCTTCCEEEEEEESCGGGBG---GGCTT
T ss_pred cCCcEeeccccccccCCCcCccccCCCCCHHHHHHHHHHHHHHHhcccccccccCCCeEEEeeeccCCCccc---cCccC
Confidence 39999 999999999999999999999999999999999999999851 12348999999999998532 24555
Q ss_pred ecccCCHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhcccccc
Q 006863 82 FNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYT 161 (628)
Q Consensus 82 ~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~ 161 (628)
.++.+++++|+|+||+||+++|++| +.+||||||.+||+|+|.|++||++|||+||||+|+|||||++|..+..
T Consensus 230 ~~~~vs~~~L~e~~L~PF~~aI~ag-~~sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~----- 303 (822)
T 3rrx_A 230 GNTLIDEKGLRDIHSAGYFSAINQG-VQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG----- 303 (822)
T ss_dssp CEECCCHHHHHHTTSHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT-----
T ss_pred ccCcCCHHHHHHHhhHHHHHHHHcC-CCEEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC-----
Confidence 5678899999999999999999877 8999999999999999999999999999999999999999999987643
Q ss_pred CChHHHHHHHHHcCCCcCCchh----hHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCC--CCCCCCCCC
Q 006863 162 RTPEEAAADAIKAGLDLDCGPF----LAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQ--PFGNLGPRD 235 (628)
Q Consensus 162 ~~~~~a~~~al~AG~D~~~~~~----~~~~l~~av~~G~i~~~~ld~av~RIL~~k~~~Glf~~~p~~~--~~~~~~~~~ 235 (628)
...+++++|++||+||+|.+. +.+.|.+||++|+|+++|||+||+|||++|+++|||+ +|+.. ++.. ....
T Consensus 304 -~~~ea~~~Al~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~~ 380 (822)
T 3rrx_A 304 -CDLEQCAQAINAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQW 380 (822)
T ss_dssp -CBTTBCHHHHHHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGGG
T ss_pred -ChHHHHHHHHHcCCCEECCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-cccc
Confidence 234567899999999999642 4568999999999999999999999999999999999 55421 1111 1235
Q ss_pred CCCHHHHHHHHHHHhhcceeccCCCCCCCCcCCCCceEEEEccCCcccccccccccc----------CCCCcCCHHHHHH
Q 006863 236 VCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAG----------VACGYTTPLQGIS 305 (628)
Q Consensus 236 v~~~~~~~la~~~A~eSivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~g----------~~~~~~t~~e~l~ 305 (628)
+++++|+++||++|+||||||||++++|||++. +||+||||+|++...+.|+|+. ..++.+|++++|+
T Consensus 381 v~~~eh~~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~ 458 (822)
T 3rrx_A 381 LGAAEHRTLAREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQ 458 (822)
T ss_dssp TTCHHHHHHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHH
T ss_pred cCCHHHHHHHHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHH
Confidence 789999999999999999999999999999864 7999999999987666666531 1346789999999
Q ss_pred Hhhc-----ceeecccCccccCCcccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCC---hhHHHHHHHHHHhc
Q 006863 306 RYAK-----TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLP---GRQQELVSRVAKAS 377 (628)
Q Consensus 306 ~~~~-----~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~---~~q~~li~~v~~~~ 377 (628)
++.. +.|.. . .+.++++|++||++|++...|++| ||.+|.|| +.|.+||++|++ .
T Consensus 459 ~~~~~~~~~v~~~~---------~------~~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a-~ 521 (822)
T 3rrx_A 459 SQVTKAGGKITLSE---------S------GEYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA-D 521 (822)
T ss_dssp HHHHHTTCEEEECT---------T------CCCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-T
T ss_pred HHHHhcCCeEEEcc---------c------ccccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-h
Confidence 8752 12211 0 024689999999999987767666 99999999 689999999986 5
Q ss_pred CCCEEEEEecCceeeecccccCCCccEEEEecCCCchhHHHHHHHHhCCC------CCCeecCcccCcccccCCCCCccc
Q 006863 378 RGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRA------NPGGKLPMTWYPQDYVSRLPMTDM 451 (628)
Q Consensus 378 ~k~vVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~~~g~AlAdVL~G~~------nPsGkLPvT~~p~~~~~~~p~~~~ 451 (628)
+||||||+++|+|+.|.|+. ++++|||++||||++++ ||||||||++ |||||||+|| |++. +|+|...
T Consensus 522 g~pvVvVl~sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~~-~q~P~~~- 595 (822)
T 3rrx_A 522 NIPVVTVFLSGRPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKYD-DQFTLNL- 595 (822)
T ss_dssp TCCEEEEEECSSCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSST-TCTTCCT-
T ss_pred CCCEEEEEeCCcceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCCc-ccCCccc-
Confidence 78999999999999996543 47999999999999986 9999999997 9999999997 9987 8899521
Q ss_pred cccccCCCCCCcccccCCCcccccCcCCCCCCceeCC
Q 006863 452 RMRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFAHTL 488 (628)
Q Consensus 452 ~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTtF~~s~ 488 (628)
++.+| +|+||||||||||||+|..
T Consensus 596 -----------~~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 596 -----------NDADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp -----------TCSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred -----------CCCCC--ccccCCCCCcCCCCCcccc
Confidence 01122 7999999999999999864
No 5
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=2.4e-99 Score=854.85 Aligned_cols=431 Identities=26% Similarity=0.416 Sum_probs=368.7
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCC-----------CCceEEeecccccccCCCCC
Q 006863 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGS-----------RLKVAACCKHYTAYDLDNWN 75 (628)
Q Consensus 8 Gi~~-~~P~~di~r~p~~gr~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~-----------~~~v~a~~KHF~g~g~~~~~ 75 (628)
|+|+ |+|++||+|||+|||++|||||||+|+++|+. +|+|||+.... ..||+||+|||||||.+. .
T Consensus 139 Gi~~~~aP~vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~-~ 216 (602)
T 1x38_A 139 GIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTV-D 216 (602)
T ss_dssp TCCEECCCBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCG-G
T ss_pred CCCEEeeceeccccCCCcCccccCcCCCHHHHHHHHH-HHHHhcCCCccccccccccccccCCeEEEeccccCCCccc-c
Confidence 9999 99999999999999999999999999999999 99999983210 138999999999999653 2
Q ss_pred CCCceeecccCCHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhh
Q 006863 76 GVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLY 155 (628)
Q Consensus 76 ~~~r~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~ 155 (628)
+++..++.+++++|+|+||+||+++|++| +.+||||||.+||+|||+|++||+++||+||||+|+|||||++|.++.
T Consensus 217 --~~~~~~~~~~~~~l~e~~l~pF~~ai~ag-~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~ 293 (602)
T 1x38_A 217 --GINENNTIINREGLMNIHMPAYKNAMDKG-VSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRIT 293 (602)
T ss_dssp --GCTTCEECCCHHHHHHHTSHHHHHHHHTT-CCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGS
T ss_pred --CcccccCcCCHHHHHHHHHHHHHHHHHcC-CCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHH
Confidence 23444678999999999999999999986 899999999999999999999999999999999999999999999887
Q ss_pred ccccccCChHHHHHHHHHcCCCcCCch----hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCCCCCC
Q 006863 156 NTQHYTRTPEEAAADAIKAGLDLDCGP----FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNL 231 (628)
Q Consensus 156 ~~~~~~~~~~~a~~~al~AG~D~~~~~----~~~~~l~~av~~G~i~~~~ld~av~RIL~~k~~~Glf~~~p~~~~~~~~ 231 (628)
..|+ .+..+++++|++||+||+|.+ .+.+.|.+||++|+|++++||+||+|||++|+++|+|+ +|+... .
T Consensus 294 ~~~~--~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p~~~~--~- 367 (602)
T 1x38_A 294 TPAG--SDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADP--A- 367 (602)
T ss_dssp SSTT--TTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCG--G-
T ss_pred hhcC--CCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCCc--c-
Confidence 5444 367899999999999999853 24578999999999999999999999999999999999 665321 1
Q ss_pred CCCCCCCHHHHHHHHHHHhhcceeccCCC--C---CCCCcCCCCceEEEEccCCccccccccccc-------cCCCCcCC
Q 006863 232 GPRDVCTPAHQQLALQAAHQGIVLLKNSA--R---TLPLSTLRHHTVAVIGPNSDVTVTMIGNYA-------GVACGYTT 299 (628)
Q Consensus 232 ~~~~v~~~~~~~la~~~A~eSivLLKN~~--~---~LPL~~~~~~kIaviGp~a~~~~~~~G~~~-------g~~~~~~t 299 (628)
....+++++|+++++++|++|||||||++ + +|||+++ .+||+||||+++....+.|+|+ +......+
T Consensus 368 ~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t 446 (602)
T 1x38_A 368 MAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTT 446 (602)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBC
T ss_pred hhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCccc
Confidence 11357899999999999999999999997 5 9999864 4799999999987655455543 22455689
Q ss_pred HHHHHHHhhc----ceeecccCccccCCcccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHH
Q 006863 300 PLQGISRYAK----TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 375 (628)
Q Consensus 300 ~~e~l~~~~~----~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~ 375 (628)
++++|+++.. +.|..++. . ++. .++++|++||++|.+...++|| ||.+|.||..|.+||+++++
T Consensus 447 ~~~~l~~~~~~~~~v~~~~~~~---------~-~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~ 514 (602)
T 1x38_A 447 ILEAVKAAVDPSTVVVFAENPD---------A-EFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG 514 (602)
T ss_dssp HHHHHHHHSCTTCEEEEESSCC---------H-HHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT
T ss_pred HHHHHHHHhCCCeEEEEcCCCC---------H-HHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh
Confidence 9999998642 44554431 1 223 3899999999999887788888 99999999999999999986
Q ss_pred hcCCCEEEEEecCceeeecccccCCCccEEEEecCCCchhHHHHHHHHhCCCCCCeecCcccCcccccCCCCCccccccc
Q 006863 376 ASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRA 455 (628)
Q Consensus 376 ~~~k~vVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~~~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~ 455 (628)
++|+|||+++|+|++|.++. ++++|||++|+||+++ +|+||||||++|||||||+|| |++. +++|.+
T Consensus 515 --~~~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~-p~~~-~~~p~~------ 581 (602)
T 1x38_A 515 --GVRCATVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTW-FKSV-DQLPMN------ 581 (602)
T ss_dssp --TSCEEEEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCB-CSCG-GGCSCC------
T ss_pred --CCCEEEEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCcccc-cCcc-ccCCcc------
Confidence 67999999999999996432 5899999999999997 999999999999999999997 8876 778842
Q ss_pred cCCCCCCcccccCCCcccccCcCCCCCC
Q 006863 456 ARGYPGRTYRFYKGPVVFPFGHGMSYTT 483 (628)
Q Consensus 456 ~~~~~~~~Yr~~~~~~~ypFG~GLSYTt 483 (628)
.+||||+ |+||||||||||+
T Consensus 582 ------~g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 582 ------VGDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp ------TTCSSCC--CSBCTTCCBCCCC
T ss_pred ------CCCCCCC--ccCcCCCCcCCCC
Confidence 2488886 9999999999996
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=5.6e-90 Score=782.99 Aligned_cols=414 Identities=21% Similarity=0.279 Sum_probs=338.8
Q ss_pred ccee-eCccccccCCCCCCc-ccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccC---CCCCCCCceee
Q 006863 8 GLTY-WSPNVNIFRDPRWGR-GQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDL---DNWNGVDRYHF 82 (628)
Q Consensus 8 Gi~~-~~P~~di~r~p~~gr-~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~---~~~~~~~r~~~ 82 (628)
|+|+ |+|++||+|||+||| ++|+|||||+|+++|+.|||+|||++ ||++|+|||||||. ++|.+.++
T Consensus 168 Gi~~~~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpg~g~~~~dsh~~~~~--- 239 (642)
T 3bmx_A 168 GINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQ-----DIASALKHFPGHGDTDVDSHYGLPL--- 239 (642)
T ss_dssp TCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHT-----TCEEEEEEETCCTTCSSCTTTSCCB---
T ss_pred CCCEEECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhC-----CceEEeccccCCCCccCCCCCCCce---
Confidence 9999 999999999999996 79999999999999999999999998 89999999999984 34443333
Q ss_pred cccCCHHHHHHhccHHHHHHHHcCCCceEEec---cccCC-------------CcccccCHHHHHHHHHhhcCCCcEEEc
Q 006863 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVN-------------GKPTCADPDILKNTIHGQWRLDGYIVS 146 (628)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vn-------------g~pa~~s~~ll~~~LR~e~gf~G~v~S 146 (628)
+.+++++|+|+||+||+++|++| +.+|||| ||.+| |+|||+|++||++|||+||||+|+|||
T Consensus 240 -~~~~~~~l~e~~l~PF~~ai~ag-~~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvS 317 (642)
T 3bmx_A 240 -VSHGQERLREVELYPFQKAIDAG-ADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVT 317 (642)
T ss_dssp -CCCCHHHHHHTTHHHHHHHHHTT-CCEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEEC
T ss_pred -eccCHHHHhhhhHHHHHHHHHcC-CCEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEEe
Confidence 45699999999999999999987 8999999 67778 799999999999999999999999999
Q ss_pred chhhhhhhhccccccCChHHHHHHHHHcCCCcCCch-------------hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHH
Q 006863 147 DCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP-------------FLAIHTEGAVRGGLLREEDVNLALAYTITVQ 213 (628)
Q Consensus 147 D~~~~~~~~~~~~~~~~~~~a~~~al~AG~D~~~~~-------------~~~~~l~~av~~G~i~~~~ld~av~RIL~~k 213 (628)
||++|+++... .+..+++++|++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|
T Consensus 318 D~~~m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k 393 (642)
T 3bmx_A 318 DALNMKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLK 393 (642)
T ss_dssp SCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHhc----CCHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 99999988752 267899999999999999432 3456899999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHhhcceeccCCCCCCCCcCCCCceEEEEccCCccccccccccc
Q 006863 214 MRLGMFDGEPSAQPFG--NLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYA 291 (628)
Q Consensus 214 ~~~Glf~~~p~~~~~~--~~~~~~v~~~~~~~la~~~A~eSivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~ 291 (628)
+++|+|+..|+..... ......+++++|+++++++|++|||||||++++|||++++.+||+||||++..
T Consensus 394 ~~~gl~~~~p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~--------- 464 (642)
T 3bmx_A 394 IKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ--------- 464 (642)
T ss_dssp HHTTCSSCCCCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH---------
T ss_pred HHcCCCcCCCCcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc---------
Confidence 9999999325421000 00012467899999999999999999999999999986556899999987432
Q ss_pred cCCCCcCCHHHHHHHhh---cceeecccCccccCCcccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhH--
Q 006863 292 GVACGYTTPLQGISRYA---KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ-- 366 (628)
Q Consensus 292 g~~~~~~t~~e~l~~~~---~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q-- 366 (628)
..+++++|+++. ...+..++.. .......+++++++++.+|+|||+++.......| ++.+|..|
T Consensus 465 -----~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l~~~q~~ 533 (642)
T 3bmx_A 465 -----TASIEQTIHDLIKRKKIKPVSLSKM-NFASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGVIDDTIS 533 (642)
T ss_dssp -----HHHHHHHHHHHHHTTSSCCCEEEEE-ECTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTEECCCCC
T ss_pred -----hhhHHHHHHHhhCCCCeeEEeccCC-CCcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCCcccccc
Confidence 246789998875 2333333211 1111245788999999999999966533111122 34566667
Q ss_pred ----------HHHHHHHHHhcCCCEEEEEecCceeeecccccCCCccEEEEecCC--------CchhHHHHHHHHhCCCC
Q 006863 367 ----------QELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYP--------GQAGGAAIADVLFGRAN 428 (628)
Q Consensus 367 ----------~~li~~v~~~~~k~vVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~--------G~~~g~AlAdVL~G~~n 428 (628)
.+||+++++ .+||+|||+ .|+||+++|+. +++|||++|++ |+++|+|+||||||++|
T Consensus 534 ~~~~~~~~~~~~li~~~~~-~~~pvVvv~-~g~P~~l~~~~---~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~n 608 (642)
T 3bmx_A 534 DSSKWATVFPRAVMKAALQ-HNKPFVLMS-LRNPYDAANFE---EAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAK 608 (642)
T ss_dssp SSTTHHHHHHHHHHHHHHH-TTCCEEEEE-CSCGGGGGGCT---TCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSC
T ss_pred ccccccchhHHHHHHHHHH-cCCCEEEEe-cCChhcccccc---ccCeEEEEccCcccccccccchHHHHHHHHHcCCCC
Confidence 899999976 678988775 58999999873 69999999999 79999999999999999
Q ss_pred CCeecCcccCcccccCCCCCccccccccCCCCCCcccccCCCcccccCcCCCCCCce
Q 006863 429 PGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFA 485 (628)
Q Consensus 429 PsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTtF~ 485 (628)
||||||+|| |++. .| .+|+||||||||||+|.
T Consensus 609 PsGkLPvt~-p~~~---~~---------------------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 609 PKGTLPVDI-PSVT---KP---------------------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp CCCCCSSCE-ECSS---ST---------------------TSEEECTTCCBCTTTCS
T ss_pred CCccCceee-eccC---CC---------------------CCcccCCCCCccCCCCC
Confidence 999999997 6542 11 26999999999999984
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=5.3e-64 Score=550.97 Aligned_cols=362 Identities=17% Similarity=0.187 Sum_probs=272.8
Q ss_pred ccee-eCccccccCCCCCC-cccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCC---CCCCCCceee
Q 006863 8 GLTY-WSPNVNIFRDPRWG-RGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYHF 82 (628)
Q Consensus 8 Gi~~-~~P~~di~r~p~~g-r~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~~---~~~~~~r~~~ 82 (628)
|+|+ |+|++||.|||+|| |++|||||||+++++|+.|||+|+|+. ||+||+|||||||.. +|.+.+
T Consensus 142 Gin~~fAPvvDv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~-----gV~a~~KHFpG~G~~~~Dsh~~~~---- 212 (535)
T 3sql_A 142 GINWVLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQY-----AVLTTAKHFPGHGDTATDSHLALP---- 212 (535)
T ss_dssp TCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTS-----SCBCEEEEETCCCSCSCCTTTSCC----
T ss_pred CCCEEecCeeccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhc-----ccceeeeeecccCCcccCCccCCC----
Confidence 9999 99999999999999 789999999999999999999999998 899999999999853 333332
Q ss_pred cccCCHHHHHHhccHHHHHHHHcCCCceEEeccccCC----CcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhccc
Q 006863 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVN----GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQ 158 (628)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vn----g~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~ 158 (628)
.++.++++|+|+||+||+++|++| +.+||||||.+| ++|||+|+++|+++||+||||+|+|||||++|+++...
T Consensus 213 ~v~~s~~~L~e~~L~PF~~aI~ag-~~sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~- 290 (535)
T 3sql_A 213 TISHDDTRLNTVELPPFKAAIQGG-VDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF- 290 (535)
T ss_dssp BCCCCHHHHHHTTSHHHHHHHHTT-CSEEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT-
T ss_pred cCCCCHHHHHHHHHHHHHHHHHcC-CCEEEecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc-
Confidence 235699999999999999999977 899999999887 48999999999999999999999999999999998653
Q ss_pred cccCChHHHHHHHHHcCCCcCCch----hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCCCCCCCCC
Q 006863 159 HYTRTPEEAAADAIKAGLDLDCGP----FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPR 234 (628)
Q Consensus 159 ~~~~~~~~a~~~al~AG~D~~~~~----~~~~~l~~av~~G~i~~~~ld~av~RIL~~k~~~Glf~~~p~~~~~~~~~~~ 234 (628)
.+..+++++|++||+||+|.+ ...+.|.+||++|+|+++|||+||+|||++|+++|+|+ ++... . ..
T Consensus 291 ---~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~-~~~~~----~-~~ 361 (535)
T 3sql_A 291 ---AAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTAT-PSTFP----Q-GI 361 (535)
T ss_dssp ---SCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSC-CCCTT----T-TC
T ss_pred ---CCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCC-CCccc----h-hh
Confidence 267899999999999997632 35678999999999999999999999999999999998 43321 1 23
Q ss_pred CCCCHHHHHHHHHHHhhcceeccCCCCCCCCc----CCCCceEEEEccCCccccccccccccCCCCcCCHHHHHHHh-hc
Q 006863 235 DVCTPAHQQLALQAAHQGIVLLKNSARTLPLS----TLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRY-AK 309 (628)
Q Consensus 235 ~v~~~~~~~la~~~A~eSivLLKN~~~~LPL~----~~~~~kIaviGp~a~~~~~~~G~~~g~~~~~~t~~e~l~~~-~~ 309 (628)
.+++++|+++|+++|+||||| +++|||+ +++.++|+|||++++.+. +.|.++..++| ++. ..
T Consensus 362 ~~~~~eh~~lA~e~A~eSiVL----~~~LPL~~~~~~~~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~ 428 (535)
T 3sql_A 362 SGDRPETRKTVAMVLERATKH----QKSLVKISSFPDNFARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYA 428 (535)
T ss_dssp CTTCHHHHHHHHHHHHHHCEE----CSSCCCCCCCSTTSEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEE
T ss_pred ccCCHHHHHHHHHHHHhCeEE----CCcCCCCcccccCCCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCce
Confidence 678999999999999999999 3599998 345689999999997654 33444444444 222 22
Q ss_pred ceeecccCccccCCcccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEecCc
Q 006863 310 TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGG 389 (628)
Q Consensus 310 ~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~~~~k~vVvVl~~g~ 389 (628)
+.+...++ +..... ....-.+=+|+-.++-..+ -. +. .++++++.+. +.-.-+|+. |+
T Consensus 429 ~~~~~~~~---------~~~~~~-~~~~~~~q~f~r~~~f~~~-------~~-~~--~~~~~~l~~~-~~~~~~~~y-g~ 486 (535)
T 3sql_A 429 AEIVELKT---------LPRLQL-EAIPTLIQCFLRGNPFTEK-------LA-DP--IDVLQKIAAQ-IPLQGVIFY-GS 486 (535)
T ss_dssp EEEEETTT---------GGGBCC-CSSCEEEEEEECCCSSCSS-------CC-CC--HHHHHHHHHH-SCEEEEEEE-EC
T ss_pred EEEEcCcc---------cccccc-CCCCeEEEEeecCCCCCCC-------cc-hH--HHHHHHHHhc-CceeEEEEe-CC
Confidence 33322221 110000 1111223356644432221 11 22 5677777764 333344545 79
Q ss_pred eeeecccccCCCccEEEEecCCCc--hhHHHHHHHHhCC
Q 006863 390 PVDVSFAKNDPRIGAILWVGYPGQ--AGGAAIADVLFGR 426 (628)
Q Consensus 390 P~~l~~~~~~~~v~AiL~a~~~G~--~~g~AlAdVL~G~ 426 (628)
||.+.|+. +..+.|-++|.+|| ++..-+-..|++.
T Consensus 487 py~~~~~~--~~~~~~p~~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 487 PYFLEALQ--TTLPEIPWWFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp CTTHHHHH--HHCTTSCEEEESCCSHHHHHHHHHHTCSS
T ss_pred hhHHHHHH--HHhhcCCcccCCccCHHHHHHHHHHHhcc
Confidence 99998874 22234556778888 5555555667763
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=6.5e-52 Score=436.01 Aligned_cols=200 Identities=20% Similarity=0.311 Sum_probs=175.0
Q ss_pred ccee-eCccccccCCCCCCccc-ccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCC---CCCCCCceee
Q 006863 8 GLTY-WSPNVNIFRDPRWGRGQ-ETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYHF 82 (628)
Q Consensus 8 Gi~~-~~P~~di~r~p~~gr~~-e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~~---~~~~~~r~~~ 82 (628)
|+|+ |+|++||.|||+|||++ |+|||||+++++|+.|+|+|+|+. ||++|+|||||||.. +|.+.+
T Consensus 125 Gi~~~~aPv~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpG~g~~~~dsh~~~~---- 195 (351)
T 3tev_A 125 GINWNFTPVLDINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTRE-----GVAPCAKHFPGHGDTHQDSHLALP---- 195 (351)
T ss_dssp TCCEECCCBCCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTT-----TCEECEEEETCCTTCBCSSTTSCC----
T ss_pred CCCEeccceeEeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHc-----CCeEEeeeccCCCCCcCCCCcCCC----
Confidence 9999 99999999999999875 699999999999999999999998 899999999999853 343333
Q ss_pred cccCCHHHHHHhccHHHHHHHHcCCCceEEec---cccCCC-cccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhccc
Q 006863 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNG-KPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQ 158 (628)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng-~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~ 158 (628)
.+.+++++|+|+||+||+++ ++| +.+|||| ||.||| .|||+|+++|++|||+||||+|+|||||++|.++...+
T Consensus 196 ~~~~s~~~L~e~~l~PF~~a-~ag-~~~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~~ 273 (351)
T 3tev_A 196 RVSKSRAELDAGELAPFRAL-LPE-TPAIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDANY 273 (351)
T ss_dssp EECCCHHHHHHTTTHHHHHH-GGG-CSEEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHHS
T ss_pred cCCCCHHHHHHhhhHHHHHH-hcC-CCEEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhcC
Confidence 35679999999999999999 665 8999999 899998 69999999999999999999999999999999886532
Q ss_pred cccCChHHHHHHHHHcCCCcCCch-------hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCC
Q 006863 159 HYTRTPEEAAADAIKAGLDLDCGP-------FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQ 226 (628)
Q Consensus 159 ~~~~~~~~a~~~al~AG~D~~~~~-------~~~~~l~~av~~G~i~~~~ld~av~RIL~~k~~~Glf~~~p~~~ 226 (628)
+..+++++|++||+||+|.. ...+.|.++|++ ++++||+||+|||++|+++|+|+ +||.+
T Consensus 274 ----~~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~-~Py~~ 340 (351)
T 3tev_A 274 ----GRGEAAVRALRAGADLVMALGRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQA-DETLD 340 (351)
T ss_dssp ----CHHHHHHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC------
T ss_pred ----CHHHHHHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCC-CCCCC
Confidence 46789999999999999842 134678899998 99999999999999999999999 78754
No 9
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=4.2e-45 Score=382.66 Aligned_cols=193 Identities=18% Similarity=0.204 Sum_probs=165.3
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCceeecccC
Q 006863 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (628)
Q Consensus 8 Gi~~-~~P~~di~r~p~~gr~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (628)
|||+ |+|++||.|+ +|.|+.|+|||||+++++|+.|+|+|||+. ||++|+|||||||.+.. ++ +.+..+
T Consensus 109 Gi~~~~aPv~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpG~G~~~~---ds-h~~~~v 178 (340)
T 2oxn_A 109 DVDLSFAPVLDMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMKAV-----GMATTGKHFPGHGAVIA---DS-HLETPY 178 (340)
T ss_dssp TCCEECCCBCCCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHHHT-----TCCCEEEEETCCTTCCS---CC-SSSSCB
T ss_pred CCCEEecCccCCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHHHC-----CceeeeccCcCCCCccC---CC-CCCCcc
Confidence 9999 9999999999 888999999999999999999999999998 89999999999996542 11 122223
Q ss_pred CH-HHHHHhccHHHHHHHHcCCCceEEec---cccCCCcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhccccccC
Q 006863 87 SK-QDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTR 162 (628)
Q Consensus 87 ~~-~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~ 162 (628)
++ ++| |+||+||+++|++|.+.+|||| ||+|||+|||+|+++|+++||+||||+|+|||||++|.++.. ..
T Consensus 179 ~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~ 253 (340)
T 2oxn_A 179 DERETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV----MG 253 (340)
T ss_dssp CCCSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH----HC
T ss_pred CCHHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhc----cC
Confidence 33 889 9999999999999888999999 999999999999999999999999999999999999987642 34
Q ss_pred ChHHHHHHHHHcCCCcCCch---hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhC
Q 006863 163 TPEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLG 217 (628)
Q Consensus 163 ~~~~a~~~al~AG~D~~~~~---~~~~~l~~av~~G~i~~~~ld~av~RIL~~k~~~G 217 (628)
+..+++++|++|||||+|.+ .....+.++++ .++++|+++++.|+....++++
T Consensus 254 ~~~ea~~~Al~AG~Dm~l~~~~~~~~~~~~~av~--~~~~~Rl~~~~~~~~~~~~~l~ 309 (340)
T 2oxn_A 254 GPVERSHQALVAGCDMILICNKREAAVEVLDNLP--IMEVPQAEALLKKQQFSYSELK 309 (340)
T ss_dssp SHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHSC--CCCCGGGGGGSCSCCCCHHHHH
T ss_pred CHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHHH--HhhHHHHHHHhhcccccHHHHh
Confidence 77899999999999999853 34567788884 4899999999988865444443
No 10
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=1.1e-44 Score=380.01 Aligned_cols=193 Identities=17% Similarity=0.222 Sum_probs=164.4
Q ss_pred ccee-eCccccccC-CCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCC---CCCCCceee
Q 006863 8 GLTY-WSPNVNIFR-DPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDN---WNGVDRYHF 82 (628)
Q Consensus 8 Gi~~-~~P~~di~r-~p~~gr~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~~~---~~~~~r~~~ 82 (628)
|||+ |+|++||.| +|.| ++|+|||||+++++|+.|+|+|||+. ||++|+|||||||.+. |.+.+.
T Consensus 112 Gin~~faPv~Dv~r~~~~i--g~rsfgeDP~lv~~~a~a~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh~~~~v--- 181 (349)
T 4gvf_A 112 DIDISFAPVLDVGHISAAI--GERSYHADPAKALAMATRFIDGMHDA-----GMKTTGKHFPGHGAVTADSHKETPC--- 181 (349)
T ss_dssp TCCEECCCBCCCCSCCTTT--GGGSSCSSHHHHHHHHHHHHHHHHHH-----TCCCEEEEETCCTTCCCCSSSSCCB---
T ss_pred CCCEEecCcccCCCCCCCC--cCcCCCCCHHHHHHHHHHHHHHHHHc-----CceeeecccccCCCcccCCCCCCCC---
Confidence 9999 999999998 4655 48999999999999999999999998 7999999999999653 222222
Q ss_pred cccCCHHHHHHhccHHHHHHHHcCCCceEEec---cccCCCcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhcccc
Q 006863 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQH 159 (628)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~ 159 (628)
.+.+.++|+|.||+||+++|++|.+.+|||| ||+|||.|||+|+++|++|||+||||+|+|||||++|.++.
T Consensus 182 -~~~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~---- 256 (349)
T 4gvf_A 182 -DPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA---- 256 (349)
T ss_dssp -CCCCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG----
T ss_pred -CCcCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc----
Confidence 2347889999999999999999888999999 99999999999999999999999999999999999997653
Q ss_pred ccCChHHHHHHHHHcCCCcCCch---hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhC
Q 006863 160 YTRTPEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLG 217 (628)
Q Consensus 160 ~~~~~~~a~~~al~AG~D~~~~~---~~~~~l~~av~~G~i~~~~ld~av~RIL~~k~~~G 217 (628)
...+..+++++|++|||||+|.+ .....+++++.+ ++++|+++++.|++...+.++
T Consensus 257 ~~~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~al~~--~~~~r~~~~~~r~~~~~~~l~ 315 (349)
T 4gvf_A 257 IMGSYAERAQASLDAGCDMILVCNNRKGAVSVLDNLSP--IKAERVTRLYHKGSFSRRELM 315 (349)
T ss_dssp GGCCHHHHHHHHHHHTCSEEEECSCHHHHHHHHHHSCC--CCCGGGGGGCCCCCCCHHHHH
T ss_pred ccCCHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHhhh--ccHHHHHHHhhcCCCCHHHHh
Confidence 24578899999999999999853 244567778765 788899999888765555543
No 11
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=4.7e-44 Score=375.43 Aligned_cols=189 Identities=19% Similarity=0.202 Sum_probs=157.7
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCC---CCCCCceeec
Q 006863 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDN---WNGVDRYHFN 83 (628)
Q Consensus 8 Gi~~-~~P~~di~r~p~~gr~~e~fgEDP~l~~~~a~a~v~GlQ~~~~~~~~v~a~~KHF~g~g~~~---~~~~~r~~~~ 83 (628)
|||+ |+|++||..++.+-++.|+|||||+++++|+.|+|+|||+. ||++|+|||||||.+. |.+.+.
T Consensus 124 Gi~~~~aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh~~~~v---- 194 (348)
T 4g6c_A 124 GIDMSFTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLA-----GMANCGKHFPGHGFAEADSHVALPT---- 194 (348)
T ss_dssp TCCEECCCBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCCCCEEEETCSSSCCC----CCCE----
T ss_pred CCCEeecCccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHhc-----CCceeeCCCCCCCCccCCCCCCCCc----
Confidence 9999 99999998554444667999999999999999999999998 7999999999999643 222222
Q ss_pred ccCCHHHHHHhccHHHHHHHHcCCCceEEec---cccCCCcccccCHHHHHHHHHhhcCCCcEEEcchhhhhhhhccccc
Q 006863 84 ARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHY 160 (628)
Q Consensus 84 ~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~ 160 (628)
...+.++|++.||+||+++ ++| +.+|||| ||++||+|||+|+++|+++||+||||+|+|||||++|.++..
T Consensus 195 ~~~~~~el~~~~l~PF~~a-~ag-~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~~---- 268 (348)
T 4g6c_A 195 DDRTLDAILEQDVAPYDWL-GLS-LAAVIPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAARE---- 268 (348)
T ss_dssp ECCCHHHHHHTTSHHHHHH-GGG-CCEEEECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGGT----
T ss_pred CCCCHHHHHHHHHHHHHHH-hcC-CCeEEecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhhh----
Confidence 1236678888899999999 766 8999999 999999999999999999999999999999999999987642
Q ss_pred cCChHHHHHHHHHcCCCcCCch---hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHh
Q 006863 161 TRTPEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRL 216 (628)
Q Consensus 161 ~~~~~~a~~~al~AG~D~~~~~---~~~~~l~~av~~G~i~~~~ld~av~RIL~~k~~~ 216 (628)
..+..+++++|++|||||+|.. .....++++|+. +.++++++||++++.|.
T Consensus 269 ~~~~~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 269 GGTLTQAADAALAAGCDMVLVCNQPDAAEVVLNGLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp TCCHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHCCC-------CHHHHHHHHTTSCCS
T ss_pred cCCHHHHHHHHHHcCCCEECCCCChHHHHHHHHHhhc-----ccchHHHHHHHHHHhcc
Confidence 4578899999999999999853 345567777764 45788999999987653
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.90 E-value=0.0026 Score=56.64 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=40.9
Q ss_pred eEEEEEEEEeCCCCC-cceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMA-GTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~-G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 586 (628)
.++++|+|+|.|..+ +.--|.||+.. ++.+=+-+.|+||+|++|+|.+.+
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyvng---------~~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYING---------TLYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETT---------EEEEEEEEEECTTCEEEEEEEECC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEECC---------EEEeeEEeccCCCCeEEEEEEEEc
Confidence 699999999999975 77889999943 233434557999999999999987
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.19 E-value=0.013 Score=50.95 Aligned_cols=61 Identities=10% Similarity=0.193 Sum_probs=48.6
Q ss_pred eEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCcchhhcccccc-ccCCCCeEEEEEEecCCCCeeEEeCCCCEEecCeE
Q 006863 528 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGE 605 (628)
Q Consensus 528 ~~~vsv~VtNtG~~-~G~evvQlY~~~p~~~~~P~k~L~gF~kv-~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~ 605 (628)
.++++++|+|.|.. ++.-.|-+|+.. .+.+...| .|++|+|++|+|.+.+ .. ++|.
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly~~g---------~~v~t~~v~~LaaG~s~tv~~~w~~-~~------------~~G~ 77 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLLVDG---------IVVDTQTVTSLESENSTNVDFHWTL-DG------------TANS 77 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEETT---------EEEEEEEESCBCBTCEEEEEEEEEC-CC------------SCSE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEEECC---------EEEcceecccccCCCEEEEEEEEee-cC------------cCce
Confidence 79999999999985 677889999854 45666677 5999999999998876 21 2577
Q ss_pred EEEEE
Q 006863 606 HSLHI 610 (628)
Q Consensus 606 y~i~v 610 (628)
|+|.+
T Consensus 78 ytl~a 82 (114)
T 2l0d_A 78 YTLTV 82 (114)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 14
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=96.13 E-value=0.0034 Score=55.30 Aligned_cols=55 Identities=16% Similarity=0.259 Sum_probs=41.0
Q ss_pred eEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCcchhhcccccc-ccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~-~G~evvQlY~~~p~~~~~P~k~L~gF~kv-~l~pGes~~V~~~l~~ 586 (628)
.++++++|+|.|.. ++.--|.+|+..|.....++ |-..| .|+||+|.+++|++..
T Consensus 17 ~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~v----gt~tv~~LaaG~s~t~~v~~~~ 73 (122)
T 2kut_A 17 EITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEI----GRDTISRIPVGGTGLARVQWKA 73 (122)
T ss_dssp EEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCC----BCCCCSCBCTTCEEECCEEEEC
T ss_pred eEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEE----eeEEccccCCCCeEEEEEEEec
Confidence 79999999999987 56778999999976444333 33335 5999999995555443
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=92.83 E-value=0.45 Score=41.60 Aligned_cols=67 Identities=12% Similarity=0.151 Sum_probs=46.3
Q ss_pred eEEEEEEEEeCCCCC-------cceEEEEEEeCCCCC-------CCcchhhccccccccCCCCeEEEEEEecCCCCeeEE
Q 006863 528 SLGLHVDIKNTGDMA-------GTHTLLVFAKPPAGN-------WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVV 593 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~-------G~evvQlY~~~p~~~-------~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~ 593 (628)
.+.+.++|+|.|+.+ |.- ..+.|.+..+. .+---| .+..+.|+|||+.+.+++++.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~-~Df~v~d~~G~~VwrwS~~~~FtQ--a~~~~tl~pGE~~~f~~~w~~------- 88 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQK-FELVVYDSEHKERYRYSKEKMFTQ--AFQNLTLESGETYDFSDVWKE------- 88 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCC-EEEEEECTTCCEEEETTTTCCCCC--CCEEEEECTTCEEEEEEEESS-------
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCE-EEEEEECCCCCEEEEccccchhhh--hhceEEECCCCEEEEEEEeCC-------
Confidence 699999999999953 221 24445443331 233223 566778999999999999982
Q ss_pred eCCCCEEecCeEEEEEE
Q 006863 594 DKFGIRRIPMGEHSLHI 610 (628)
Q Consensus 594 d~~~~~~~~~G~y~i~v 610 (628)
.++||.|++.+
T Consensus 89 ------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 ------VPEPGTYEVKV 99 (120)
T ss_dssp ------CCCSEEEEEEE
T ss_pred ------CCCCccEEEEE
Confidence 45799999854
No 16
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=89.09 E-value=0.54 Score=39.14 Aligned_cols=52 Identities=23% Similarity=0.291 Sum_probs=31.9
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006863 529 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 584 (628)
Q Consensus 529 ~~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 584 (628)
-+++++|+|||+++ +|+=-+.......| ...=.|| +-|..+||++++|++.=
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~ 83 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVA 83 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEE
Confidence 47889999999999 99833322111111 1111222 34667999999998753
No 17
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.55 E-value=1.8 Score=36.65 Aligned_cols=61 Identities=11% Similarity=0.154 Sum_probs=37.3
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecCCCCeeEEe
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVD 594 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d 594 (628)
..+.+++++|+|+.+.. .-+....... ...--.-..+-.|+||++.+|++++.+ +....++
T Consensus 27 ~~~~~~~l~N~g~~p~~----~~~~~~~~~~-~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~ 87 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDAL----FNMTPPTSAL-GACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFE 87 (112)
T ss_dssp CEEEEEEEEECCSSCEE----EEECCCSSHH-HHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEE
T ss_pred EEEEEEEEEECCcceEE----EEEecCCccc-cCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEE
Confidence 46789999999998622 2111111100 000011233556999999999999999 6666654
No 18
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=86.92 E-value=1.4 Score=45.19 Aligned_cols=55 Identities=13% Similarity=0.245 Sum_probs=37.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEE---------EEeCCCCC--CCcchhhccccccc------cCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLV---------FAKPPAGN--WSPNKQLIGFKKVH------VTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQl---------Y~~~p~~~--~~P~k~L~gF~kv~------l~pGes~~V~~~l~~ 586 (628)
+++++++|||+|+.+ |+| |+.+.... ..-+.+|.+.+-.. ++||||++|+++...
T Consensus 265 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 265 AMRMKLTITNHGNSP----IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEEECSSSC----EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEEcCCCCc----eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 799999999999876 666 33322111 22344666554332 899999999998865
No 19
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=86.69 E-value=1.7 Score=48.40 Aligned_cols=102 Identities=14% Similarity=0.126 Sum_probs=63.3
Q ss_pred cccccCcCCCCCCceeCCCccCCCcccccccccccccccccccccccccccCCCCCceEEEEEEEEeCCC--CCcceEEE
Q 006863 471 VVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGD--MAGTHTLL 548 (628)
Q Consensus 471 ~~ypFG~GLSYTtF~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsv~VtNtG~--~~G~evvQ 548 (628)
.+|..|.|+.|..|..+.|..... +...+ .+.+. .+. +.+|+++|+|.+. ++|.+++
T Consensus 337 ~~ye~~~~i~~~~~~~~~l~~~~~------------~~~~~---~~~~~----~g~-~~~~~~~vtn~~~~~~~~~~~~- 395 (601)
T 1w8o_A 337 LLYEPGTGIRYANFNLAWLGGICA------------PFTIP---DVALE----PGQ-QVTVPVAVTNQSGIAVPKPSLQ- 395 (601)
T ss_dssp EEECCSSEEEEEEECHHHHTBCSC------------CEECC---CEEEC----TTC-EEEEEEEEECCSSSCBSSCEEE-
T ss_pred EEEecCCcceEEEecHHHhccccC------------CCcCc---cceec----CCc-eeEEEEEEECCCceeccCceEE-
Confidence 467777788888888776653210 00000 01111 122 6899999999987 7898887
Q ss_pred EEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecCCCCeeEEeCCCCEEecCeEEEEEEeC
Q 006863 549 VFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGD 612 (628)
Q Consensus 549 lY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~ 612 (628)
||+...... .+ .-..++||++.+|.|+|.. .+- +++|.|.+.+.-
T Consensus 396 ~~~~~~~~~-------~~-~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~~ 440 (601)
T 1w8o_A 396 LDASPDWQV-------QG-SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGATL 440 (601)
T ss_dssp EECCTTSEE-------EE-EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEEE
T ss_pred EecCCCcEE-------ec-cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEEE
Confidence 887433321 11 2356899999999888887 431 456777776553
No 20
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=85.93 E-value=1.1 Score=38.89 Aligned_cols=52 Identities=19% Similarity=0.134 Sum_probs=32.3
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006863 529 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 584 (628)
Q Consensus 529 ~~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 584 (628)
-+++++|+|||+++ ||+=-+...-...| ...=.|+ +-|..+||++++|++.=
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 47899999999999 89833332211111 1111222 34567999999998753
No 21
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=85.93 E-value=1.1 Score=38.89 Aligned_cols=52 Identities=19% Similarity=0.134 Sum_probs=32.3
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006863 529 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 584 (628)
Q Consensus 529 ~~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 584 (628)
-+++++|+|||+++ ||+=-+...-...| ...=.|+ +-|..+||++++|++.=
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 47899999999999 89833332211111 1111222 34567999999998753
No 22
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=84.80 E-value=1.4 Score=38.95 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=13.6
Q ss_pred ccCCCCeEEEEEEec
Q 006863 571 HVTAGALQSVRLDIH 585 (628)
Q Consensus 571 ~l~pGes~~V~~~l~ 585 (628)
.|.||||.+|+|+++
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 23
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=82.98 E-value=2.1 Score=44.34 Aligned_cols=62 Identities=18% Similarity=0.165 Sum_probs=35.9
Q ss_pred eEEEEEEEEeCCCCCc------------ceEEEEEEeC---CCCC---CCcchhhccccccccCCCCeEEEEEEecCCCC
Q 006863 528 SLGLHVDIKNTGDMAG------------THTLLVFAKP---PAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKH 589 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G------------~evvQlY~~~---p~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ 589 (628)
.+.|.++|||+|+.+= .+.++|+-.. |... .+..-.+..| +.|+||||.+++|.|....+
T Consensus 37 ~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~yd 114 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLYD 114 (343)
T ss_dssp CCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTBT
T ss_pred CeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhccc
Confidence 4789999999998541 1234444211 1111 0111123343 34899999999999976445
Q ss_pred ee
Q 006863 590 LS 591 (628)
Q Consensus 590 ls 591 (628)
|+
T Consensus 115 Ls 116 (343)
T 2x3c_A 115 MS 116 (343)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 24
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.39 E-value=2.2 Score=37.04 Aligned_cols=57 Identities=11% Similarity=0.138 Sum_probs=38.8
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecCCCCeeEEeC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDK 595 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~ 595 (628)
+-+.++.|+|+|..+++-..+. ..|. ...|. +-.|+|||+.+|++++.+ .....|+.
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~--~~~F-~i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~ 98 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKT--CRPF-SIEPA-------IGTLNVGESMQLEVEFEP-QSVGDHSG 98 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEEC--CTTE-EEESS-------EEEECTTCEEEEEEEECC-SSSBCCCC
T ss_pred eEEEEEEEEECCCCCEEEEEec--CCCe-EEECC-------cCEECCCCEEEEEEEEEc-CCCccEEE
Confidence 4678999999999986543221 1111 12343 356899999999999999 66666543
No 25
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=79.82 E-value=2.9 Score=37.43 Aligned_cols=55 Identities=15% Similarity=0.031 Sum_probs=33.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCC-CCCcchhhccc-cccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG-NWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~-~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 586 (628)
..+-+++|+|||.++ ++.-+..+.. .......|.=. .+-.|.|||+.+|++++..
T Consensus 44 ~~~~~l~I~Ntg~vp----a~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVP----CHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSC----EEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccc----eEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 357799999999998 3443333221 11000011111 2446999999999999986
No 26
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=78.06 E-value=3.4 Score=36.34 Aligned_cols=54 Identities=15% Similarity=0.379 Sum_probs=30.9
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeC------------CCCCCCc---chhhccccccccCCCCeEEEEEEec
Q 006863 530 GLHVDIKNTGDMA----GTHTLLVFAKP------------PAGNWSP---NKQLIGFKKVHVTAGALQSVRLDIH 585 (628)
Q Consensus 530 ~vsv~VtNtG~~~----G~evvQlY~~~------------p~~~~~P---~k~L~gF~kv~l~pGes~~V~~~l~ 585 (628)
+|+|+++|+|... +-++|-.=-.. +...--| .+.| . .-..|.||||.+|+|.++
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~-~-~t~~l~pGes~~vtf~~~ 99 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVI-A-HTSVIGGGETDSVTFDVS 99 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEE-E-ECCCBCTTCEEEEEEESS
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhh-c-cceeeCCCCEEEEEEecc
Confidence 5789999999987 77765321000 0000000 0111 1 112479999999999986
No 27
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=76.62 E-value=4.7 Score=41.85 Aligned_cols=54 Identities=15% Similarity=0.235 Sum_probs=34.3
Q ss_pred eEEEEEEEEeCCCCCcceEEEE--EEe----CCCC---C--CCcchhhc---cc--cccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLV--FAK----PPAG---N--WSPNKQLI---GF--KKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQl--Y~~----~p~~---~--~~P~k~L~---gF--~kv~l~pGes~~V~~~l~~ 586 (628)
+++++++|||+|+.+ ||| |-. +... . .....+|. |- .. -|+||||++|+++++.
T Consensus 299 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 299 ELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC-CBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC-CcCCCcceEEEEEeeh
Confidence 799999999999876 565 221 1111 1 11223332 22 23 5999999999999875
No 28
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=75.17 E-value=4.6 Score=35.53 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=13.6
Q ss_pred ccCCCCeEEEEEEec
Q 006863 571 HVTAGALQSVRLDIH 585 (628)
Q Consensus 571 ~l~pGes~~V~~~l~ 585 (628)
.|.||||.+|+|..+
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 2ccw_A 86 VIGGGESDSVTFDVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 29
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=74.35 E-value=2.8 Score=38.71 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=13.4
Q ss_pred ccCCCCeEEEEEEec
Q 006863 571 HVTAGALQSVRLDIH 585 (628)
Q Consensus 571 ~l~pGes~~V~~~l~ 585 (628)
.|.|||+.+|+|.++
T Consensus 125 ~l~pGet~svtf~~~ 139 (167)
T 3ay2_A 125 LIGGGEESSLTLDPA 139 (167)
T ss_dssp CBCTTCEEEEEECGG
T ss_pred eeCCCCEEEEEEecC
Confidence 479999999999976
No 30
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=73.47 E-value=8.3 Score=36.98 Aligned_cols=50 Identities=12% Similarity=0.223 Sum_probs=34.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 586 (628)
..+.+++++|+|+.. .+++--..... ..| .+.|-.|+|||+.++++++..
T Consensus 135 ~~~~~f~i~N~G~~p----L~I~~v~~scgct~~-----~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGP----LRLHSVTTRNPALTA-----VPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp CEEEEEEEEECSSSC----EEEEEEEECSTTEEE-----EESCSEECTTCEEEEEEEECH
T ss_pred eEEEEEEEEECCCCC----EEEEEEEeCCCCEee-----ecCCccCCCCCEEEEEEEEec
Confidence 578899999999987 33321111111 222 255777999999999999988
No 31
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=71.71 E-value=7.2 Score=34.16 Aligned_cols=55 Identities=22% Similarity=0.398 Sum_probs=34.4
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCCCC------CCcc--------hhhccccccccCCCCeEEEEEEec
Q 006863 530 GLHVDIKNTGDMA----GTHTLLVFAKPPAGN------WSPN--------KQLIGFKKVHVTAGALQSVRLDIH 585 (628)
Q Consensus 530 ~vsv~VtNtG~~~----G~evvQlY~~~p~~~------~~P~--------k~L~gF~kv~l~pGes~~V~~~l~ 585 (628)
+|+++++|+|+.+ |-++|-.=-..+... .-|. .+..+-.++ |.|||+.+|+|+.+
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~-l~pGes~~vtf~~~ 100 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKL-IGSGEKDSVTFDVS 100 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCC-BCTTCEEEEEEEGG
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccce-eCCCcEEEEEEeCc
Confidence 6889999999998 888887621111100 0111 111222222 89999999999987
No 32
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=71.51 E-value=4.1 Score=38.73 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=31.7
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006863 529 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 584 (628)
Q Consensus 529 ~~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 584 (628)
-+++++|+|||+++ ||+=-+.......| ...=.|| +-|..+||++++|++.=
T Consensus 125 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 188 (225)
T 3qga_A 125 EITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLIP 188 (225)
T ss_dssp CCEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred ceEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEEE
Confidence 35789999999999 89833332211111 1111122 34567999999998753
No 33
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=69.22 E-value=4 Score=39.12 Aligned_cols=51 Identities=22% Similarity=0.194 Sum_probs=31.8
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 584 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 584 (628)
+++++|+|||+++ ||+=-+.......| ...=.|| +-|..+||++++|++.=
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5789999999999 89843332211111 1112222 34567999999999854
No 34
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=66.12 E-value=10 Score=33.30 Aligned_cols=15 Identities=33% Similarity=0.508 Sum_probs=13.6
Q ss_pred ccCCCCeEEEEEEec
Q 006863 571 HVTAGALQSVRLDIH 585 (628)
Q Consensus 571 ~l~pGes~~V~~~l~ 585 (628)
.|.||||.+|+|..+
T Consensus 86 ~l~pGet~svtf~~~ 100 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVS 100 (128)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred eeCCCCEEEEEEecc
Confidence 489999999999986
No 35
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=64.21 E-value=5.4 Score=38.68 Aligned_cols=57 Identities=14% Similarity=0.084 Sum_probs=36.7
Q ss_pred EEEeCCCCCcceEEEEEEeCCCCC--CCc--------chhhccccccccCCCCeEEEEEEecCCCCeeEEeCC
Q 006863 534 DIKNTGDMAGTHTLLVFAKPPAGN--WSP--------NKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF 596 (628)
Q Consensus 534 ~VtNtG~~~G~evvQlY~~~p~~~--~~P--------~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~ 596 (628)
++-|-|. |.=+|+||.+.+... ..| .+.+..+.++.|.||||- +|.+.-.-++|-+.
T Consensus 130 diinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESi----Tl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 130 DIINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESI----CLPPGLYHSFWAEA 196 (246)
T ss_dssp EEEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEE----EECTTEEEEEEECT
T ss_pred cEEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeE----ecCCCCEEEEEecC
Confidence 3455554 567788888876632 111 467888999999999985 67772222455444
No 36
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=63.30 E-value=16 Score=32.08 Aligned_cols=18 Identities=6% Similarity=-0.021 Sum_probs=14.5
Q ss_pred ccccCCCCeEEEEEEecC
Q 006863 569 KVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 569 kv~l~pGes~~V~~~l~~ 586 (628)
.+.|.|||+.+|+|+.+.
T Consensus 98 t~~l~pGet~~v~f~~~~ 115 (139)
T 2aan_A 98 SPLANGNETVEVTFTAPA 115 (139)
T ss_dssp CCCBCTTCEEEEEEECCS
T ss_pred ccccCCCCEEEEEEECCC
Confidence 345899999999998754
No 37
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=60.28 E-value=7.1 Score=45.92 Aligned_cols=58 Identities=17% Similarity=0.283 Sum_probs=38.1
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeC--CCCC---CCcchhhccc--cccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKP--PAGN---WSPNKQLIGF--KKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~--p~~~---~~P~k~L~gF--~kv~l~pGes~~V~~~l~~ 586 (628)
+++++++|||+|+.+...+.++-+.. |... ..|. .|.-+ +.+.|+|||+++++++++.
T Consensus 500 ~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 500 KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 57899999999987654444433322 2221 2343 34322 4577999999999999987
No 38
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=58.47 E-value=13 Score=31.95 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=24.1
Q ss_pred ccCCCCeEEEEEEecCCCCeeEEeCCC---------------CE--Eec-CeEEEEEEeCC
Q 006863 571 HVTAGALQSVRLDIHVCKHLSVVDKFG---------------IR--RIP-MGEHSLHIGDL 613 (628)
Q Consensus 571 ~l~pGes~~V~~~l~~~~~ls~~d~~~---------------~~--~~~-~G~y~i~vG~s 613 (628)
.+++||+-+|+++-...-.|++++.++ .| .++ .|.|+|.|...
T Consensus 35 ~a~aGQ~l~V~ls~~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 35 VAXAGQTMTVXIGGSSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CC-CCCEEEC-CEESTTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred EecCCCEEEEEeCCCCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 457777777766433312344554432 67 554 89999999964
No 39
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=45.55 E-value=47 Score=34.33 Aligned_cols=57 Identities=14% Similarity=0.038 Sum_probs=35.8
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCC-CCCCCcchhhccc-cccccCCCCeEEEEEEecCCCC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPP-AGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHVCKH 589 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p-~~~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~~~~ 589 (628)
..+-+++|+|||.+. ++.-+..+ .....+...|.=. .+-.|.|||+.+|++++.. ++
T Consensus 47 ~~~~~l~i~N~g~~p----a~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v-~~ 105 (366)
T 3qis_A 47 LQKEKFQISNNGQVP----CHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV-SK 105 (366)
T ss_dssp CEEEEEEEEECSSSC----EEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB-CT
T ss_pred eEEEEEEEEecCCce----EEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEE-CH
Confidence 467889999999998 44433332 2222211112111 2346999999999999987 44
No 40
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=43.94 E-value=46 Score=29.85 Aligned_cols=54 Identities=15% Similarity=0.085 Sum_probs=26.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCcch-hhccccc--cccCCCC--eEEEEEEe
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNK-QLIGFKK--VHVTAGA--LQSVRLDI 584 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P~k-~L~gF~k--v~l~pGe--s~~V~~~l 584 (628)
+|+++++|.|+...-.++..=...+.. .-|.. ....... ..|.||| +.+++|++
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYA-VMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCC-SSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchh-ccccccccccccccccccCCCCceEEEEEEEE
Confidence 688899998643334444331111111 11110 0111111 1579999 77777777
No 41
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=43.85 E-value=19 Score=41.73 Aligned_cols=51 Identities=18% Similarity=0.198 Sum_probs=31.9
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcc---hhhccc---------cccccCCCCeEEEEEE
Q 006863 529 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPN---KQLIGF---------KKVHVTAGALQSVRLD 583 (628)
Q Consensus 529 ~~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P~---k~L~gF---------~kv~l~pGes~~V~~~ 583 (628)
-.++++|+|||+|+ +|+=-+.+.-...|. -+.++| +-|..+|||+|+|++.
T Consensus 151 ~~~~~~v~~~~~r~----~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 151 KAVILKVTSKGDRP----IQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp EEEEEEEEECCSSC----EEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEeCCCCc----eEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 47899999999999 888333322111111 011111 2356799999999985
No 42
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=41.98 E-value=60 Score=31.01 Aligned_cols=53 Identities=19% Similarity=0.118 Sum_probs=35.0
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC---CCcchhhccccccccCCCCeEEEEEEecC
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 586 (628)
.++++|+|+|+.. -.||..+.+-... ..|..-.=-. ..|+||+.++|+|....
T Consensus 29 ~~sl~l~N~~~~p--~LvQswv~~~~~~~~~~~pFivtPPl--~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDYP--VLIQSRIYDENKEKESEDPFVVTPPL--FRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSSC--EEEEEEEECTTSCCCSSCSEEEESSE--EEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCCC--EEEEEEEecCCCCccccCCEEECCCe--EEeCCCCceEEEEEecC
Confidence 5789999999874 8999999764332 2221111111 13799999999997654
No 43
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=40.54 E-value=1.5e+02 Score=27.87 Aligned_cols=52 Identities=13% Similarity=0.077 Sum_probs=32.0
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccc-cccccCCCCeEEEEEEecCCCCe
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHVCKHL 590 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~~~~l 590 (628)
..+.+++++|+|+.+=. +.++ +.|.- ++.- .-..|+|||+.+++|+++. ..+
T Consensus 20 ~~~~~~~i~N~g~~pl~-i~~~--~~p~~-------~~~~~~~~~I~PG~~g~I~vt~~~-~~~ 72 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQ-VAVV--SLPSF-------VSLDDRAFRLQAREPRELNLSLAV-PRN 72 (220)
T ss_dssp CCEEEEEEEECSSSCEE-EEEE--ECCTT-------EECSCCEEEECSSSCEEEEEEECC-CTT
T ss_pred cceEEEEEEeCCCCceE-EEec--cCCCc-------eEeeeCcceeCCCCceEEEEEEcc-hhc
Confidence 45679999999998721 1111 11210 1110 1145899999999999988 443
No 44
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=40.03 E-value=56 Score=31.24 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=34.5
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEecC
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 586 (628)
.++++|+|+|+. --.||..+...... ..|..-+=-. ..|+||++++|+|....
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAPFLVMPPL--FRLEANQQSQLRIVRTG 82 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEEESSE--EEECTTCEEEEEEEECC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEEeCCE--EEECCCCceEEEEEECC
Confidence 478899999976 67999999764332 1111000001 23899999999996543
No 45
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=39.75 E-value=53 Score=26.70 Aligned_cols=18 Identities=17% Similarity=0.267 Sum_probs=13.7
Q ss_pred ccccCCCCeEEEEEEecC
Q 006863 569 KVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 569 kv~l~pGes~~V~~~l~~ 586 (628)
+..|.||++.+++|+.+.
T Consensus 60 ~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 60 DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTCEEEEEECCCS
T ss_pred ceeecCCcceeEEEeccc
Confidence 345899999988887654
No 46
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=35.88 E-value=94 Score=30.43 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=35.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchh---hcccccc-ccCCCCeEEEEEEec
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQ---LIGFKKV-HVTAGALQSVRLDIH 585 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P~k~---L~gF~kv-~l~pGes~~V~~~l~ 585 (628)
.++++|+|+|+. --.||..+.+......|.+. +.--=-+ .|+||++++|+|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 588999999986 58999999864432122111 1111122 389999999999654
No 47
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=35.54 E-value=77 Score=30.70 Aligned_cols=52 Identities=10% Similarity=0.011 Sum_probs=33.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEec
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH 585 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~ 585 (628)
.++++|+|+|+.. -.||..+.+.... ..|..-.=-. ..|+||+.++|+|...
T Consensus 39 ~~sl~l~N~~~~P--~LvQsWv~~~~~~~~~pfivtPPl--fRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDYP--MLVQSEVLSEDQKSPAPFVVTPPL--FRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSSC--EEEEEEEECTTSSSBCSEEEESSE--EEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCCc--EEEEEEEEcCCCCccCCEEEcCCe--EEECCCCceEEEEEEC
Confidence 4788999999764 8999999864322 1121000001 1389999999999654
No 48
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=34.77 E-value=42 Score=27.92 Aligned_cols=41 Identities=12% Similarity=0.278 Sum_probs=25.9
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecC
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 586 (628)
+|++.++|.+.. . .-+ .+ | .+ |+ +..+.||++.+++|+.+.
T Consensus 47 ~V~~~~~n~d~~-~-H~~--~i--~--------~~-~~-~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 47 AVKVVVENKSPI-S-EGF--SI--D--------AF-GV-QEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEEEEECSSS-C-EEE--EE--G--------GG-TE-EEEECTTCEEEEEEECCS
T ss_pred EEEEEEEECCCC-e-EEE--EE--c--------CC-Cc-eeEeCCCCEEEEEEECCC
Confidence 678888999865 1 111 11 1 11 22 566999999999997653
No 49
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=34.07 E-value=57 Score=30.42 Aligned_cols=54 Identities=22% Similarity=0.268 Sum_probs=35.1
Q ss_pred ccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHH-----hcCCCEEEEEecCc
Q 006863 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGG 389 (628)
Q Consensus 325 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~-----~~~k~vVvVl~~g~ 389 (628)
....+..+..+.||.+|++.=.. +..+|+.-+.+|+.+.. -.+||+.++..+|+
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP~Y-----------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg 120 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTPEY-----------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPG 120 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEEcCcc-----------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCC
Confidence 34566778889999999876221 34678888888888754 12455555544433
No 50
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=32.90 E-value=90 Score=26.15 Aligned_cols=12 Identities=25% Similarity=0.498 Sum_probs=9.8
Q ss_pred Eec-CeEEEEEEe
Q 006863 600 RIP-MGEHSLHIG 611 (628)
Q Consensus 600 ~~~-~G~y~i~vG 611 (628)
+++ .|+|+|.|.
T Consensus 78 ~LP~sG~Y~I~V~ 90 (111)
T 4g9s_B 78 SLPASGKYELRVL 90 (111)
T ss_dssp ECSSSEEEEEEEE
T ss_pred EecCCccEEEEEE
Confidence 454 899999995
No 51
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=32.71 E-value=1.4e+02 Score=28.94 Aligned_cols=59 Identities=8% Similarity=0.023 Sum_probs=37.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccc-cccccCCCCeEEEEEEecCCCCe
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGF-KKVHVTAGALQSVRLDIHVCKHL 590 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF-~kv~l~pGes~~V~~~l~~~~~l 590 (628)
.+.+.++|-|..+..=+--|+|..+..... ..+. ..+ +++.|.||++++|.|.+.+ ..+
T Consensus 97 ~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~---~~~~~~v~v~a~~~~~v~f~i~p-~~~ 157 (252)
T 3hrz_B 97 QVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG---QRYRQQFPIKALSSRAVPFVIVP-LEQ 157 (252)
T ss_dssp CEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS---CCEEEEEEECTTEEEEEEEEEEE-CSS
T ss_pred EEEEEEEEEcccCceEEEEEEEEcCCceEeecCCC---CceEEEEEECCCCeEEEEEEEEe-ccC
Confidence 689999999998876554455544332211 1111 112 3467999999999999987 444
No 52
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=31.72 E-value=17 Score=33.10 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=28.0
Q ss_pred ccccc--cccCCCCeEEEEEEecCCCCeeEEeCCCCE
Q 006863 565 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIR 599 (628)
Q Consensus 565 ~gF~k--v~l~pGes~~V~~~l~~~~~ls~~d~~~~~ 599 (628)
.+|.. ..|.||++.+|.|.|.. .+++.||....|
T Consensus 97 I~F~~~ag~l~pg~s~eiq~ri~~-~dws~~dqsNDy 132 (160)
T 1g43_A 97 VALNSDAGSLPAGGSIEIQTRFAR-NDWSNFDQSNDW 132 (160)
T ss_dssp EEECTTSCEECTTCEEEEEEEEEE-TTCCCEEGGGCT
T ss_pred EEecCCcceECCCCcEEEEEEEec-CCCCcccccCCc
Confidence 46765 57999999999999998 899999976554
No 53
>4b9f_A Cellulosomal-scaffolding protein A; sugar binding protein, cellulosome; 1.19A {Clostridium thermocellum atcc 27405} PDB: 1nbc_A
Probab=30.88 E-value=24 Score=31.81 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=29.2
Q ss_pred ccccccccCCCCeEEEEEEecCCCCeeEEeCCCCEE
Q 006863 565 IGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRR 600 (628)
Q Consensus 565 ~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~ 600 (628)
.+|.-..|.||++.+|.|.|.. .+.+.||....|-
T Consensus 94 I~Ft~g~l~pg~~~eiQ~ri~~-~~~s~~d~snDyS 128 (152)
T 4b9f_A 94 ISFTGGTLEPGAHVQIQGRFAK-NDWSNYTQSNDYS 128 (152)
T ss_dssp EEESSCEECTTCEEEEEEEEEE-TTCCCEESTTCTT
T ss_pred EEccCceEcCCCcEEEEEEEEC-CCCcceeEcCCcC
Confidence 4577667999999999999998 8999999876653
No 54
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=29.42 E-value=84 Score=29.03 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=38.2
Q ss_pred ccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHH---------------hcCCCEEEEEecCc
Q 006863 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 389 (628)
Q Consensus 325 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~---------------~~~k~vVvVl~~g~ 389 (628)
..+.+..+....||.+|++.=.. +..+|..-+.+|+.+.. -.+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P~y-----------~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFPIW-----------WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECchh-----------hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 34567778889999999875221 35678888888888742 12566777766777
Q ss_pred e
Q 006863 390 P 390 (628)
Q Consensus 390 P 390 (628)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 7
No 55
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=28.57 E-value=1.4e+02 Score=25.72 Aligned_cols=65 Identities=11% Similarity=0.109 Sum_probs=40.7
Q ss_pred cchhhccccccccCCCCeEEEEEEecCCCC------------e------eEEeCCC-CEEecCeEEEE---EEeCCCCee
Q 006863 560 PNKQLIGFKKVHVTAGALQSVRLDIHVCKH------------L------SVVDKFG-IRRIPMGEHSL---HIGDLKHSI 617 (628)
Q Consensus 560 P~k~L~gF~kv~l~pGes~~V~~~l~~~~~------------l------s~~d~~~-~~~~~~G~y~i---~vG~ss~~~ 617 (628)
|--.+..-.|.-|-||||.+|++-+.- -+ . ..||... +.-.-||+|.= +-|.|+..+
T Consensus 48 pDLtvisiDk~vL~PGESA~it~IvKD-id~nPIn~v~i~~~~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~i 126 (146)
T 2lv4_A 48 PDLTVMSIDKSVLSPGESATITTIVKD-IDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERI 126 (146)
T ss_dssp GGGCEEECCCCCBCTTCEEEEEEECBB-TTSCBCCCCCCBCCEECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCEE
T ss_pred CCcEEEecCccccCCCcceEEEEEEEe-CCCCcccceeeeeeeeccccccceeecceecCCCCcceEEEEEEcCCCCceE
Confidence 333455567888999999999986643 11 1 2344321 12345899975 457888877
Q ss_pred EEEEEEec
Q 006863 618 SLQANLEG 625 (628)
Q Consensus 618 ~~~~~~~~ 625 (628)
.++.+--|
T Consensus 127 ~l~yky~g 134 (146)
T 2lv4_A 127 DISFKYAM 134 (146)
T ss_dssp EEEEECST
T ss_pred EEEeeeee
Confidence 77765444
No 56
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=27.57 E-value=14 Score=33.12 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=28.1
Q ss_pred ccccccccCCC-CeEEEEEEecCCCCeeEEeCCCCEE
Q 006863 565 IGFKKVHVTAG-ALQSVRLDIHVCKHLSVVDKFGIRR 600 (628)
Q Consensus 565 ~gF~kv~l~pG-es~~V~~~l~~~~~ls~~d~~~~~~ 600 (628)
.+|....|.|| ++.+|.|.|.. .+++-||....|-
T Consensus 81 I~f~~g~l~pg~~s~eiQ~Ri~~-~dws~~dqsnDyS 116 (146)
T 3zqx_A 81 LEFKDVKLPAGGQTGEIQFVIRY-ADWSFHDQSNDYS 116 (146)
T ss_dssp EEECSCEECTTCBCCCEEEEEEE-TTCCCEEGGGCTT
T ss_pred EEeCCcEEcCCCceEEEEEEEEc-CCCccccccCCcc
Confidence 46777779998 47899999998 8999999866553
No 57
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=27.08 E-value=1.4e+02 Score=28.14 Aligned_cols=51 Identities=8% Similarity=0.098 Sum_probs=32.5
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEE
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLD 583 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~ 583 (628)
.++++|+|+|+-. --.||..+...... ..|..-+=-. ..|+||++++|+|.
T Consensus 17 ~~sl~l~N~~~~~-p~LvQsWv~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~ 68 (206)
T 1l4i_A 17 QVQLAVTNNDDKS-SYLIQSWIENAEGKKDARFVITPPL--FSMQGKKENTLRII 68 (206)
T ss_dssp EEEEEEEECCTTC-EEEEEEEEEETTSCBCSSEEEESSE--EEEESSEEEEEEEE
T ss_pred EEEEEEEeCCCCc-cEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEE
Confidence 5789999999622 57899999763221 1121111111 13789999999997
No 58
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=26.56 E-value=63 Score=36.33 Aligned_cols=57 Identities=12% Similarity=-0.053 Sum_probs=42.8
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCC--CCCcchhhcccc--ccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGFK--KVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~--~~~P~k~L~gF~--kv~l~pGes~~V~~~l~~ 586 (628)
.+.|+++++|..+.. ..|+++++.-.- .+.+..++..-. .+.|+|+|+++|.+.|..
T Consensus 488 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 488 DFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 589999999999876 678888776332 266666662223 356899999999999986
No 59
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=26.08 E-value=78 Score=29.67 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=36.1
Q ss_pred HHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHHh---------------cCCCEEEEEecCcee
Q 006863 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKA---------------SRGPVVLVLMCGGPV 391 (628)
Q Consensus 327 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~~---------------~~k~vVvVl~~g~P~ 391 (628)
..+..+....||.+|++.=.. +..+|..-+.+|+.+... .+|+++++..+|+|+
T Consensus 83 ~~~~~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~ 151 (211)
T 3p0r_A 83 ADKYLNQFLEADKVVFGFPLW-----------NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVY 151 (211)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCC
Confidence 455667788999999876322 346788778888887431 246666666666664
No 60
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=25.86 E-value=17 Score=37.44 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=31.5
Q ss_pred HHhhcCCEEEEEEeCCCccccccCCCCCCCCChhH----HHHHHHHHHhcCCCEEEEEecCceeee
Q 006863 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (628)
Q Consensus 332 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q----~~li~~v~~~~~k~vVvVl~~g~P~~l 393 (628)
++.+.||+||++.|... .+|.+|.+| -... .++.+++.+.+.+.++|++. +||++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DL--l~~Na~I~~~~~~~i~~~a~~~~~vlvv-sNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDL--LEMNARIFKEQGEAIAAVAASDCRVVVV-GNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHH--HHHhHHHHHHHHHHHHhhccCceEEEEe-CCCcch
Confidence 45789999999877543 445455443 1222 23445555533334444433 699875
No 61
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=25.65 E-value=77 Score=35.60 Aligned_cols=57 Identities=18% Similarity=0.091 Sum_probs=40.1
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCC--CCCcchhhccc-cccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~--~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 586 (628)
.+.|+++|+|..+.. ..|+++++.-.- .+.+..+++-= ..+.|+|+|+++|.+.|..
T Consensus 487 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y 546 (695)
T 1g0d_A 487 DFDVIVEVKNEGGRD--AHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHY 546 (695)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECH
Confidence 589999999999876 567887765322 14444333211 2456899999999999986
No 62
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=25.43 E-value=1.4e+02 Score=28.04 Aligned_cols=52 Identities=8% Similarity=0.032 Sum_probs=33.5
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEe
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDI 584 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l 584 (628)
.++++|+|+|+. ---.||..+...... ..|..-+=-. ..|+||++++|+|..
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~ 69 (205)
T 1klf_A 17 QVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPL--FAMKGKKENTLRILD 69 (205)
T ss_dssp EEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSE--EEECSSEEEEEEEEE
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEEe
Confidence 578999999954 147899999764322 2221111001 237899999999977
No 63
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=25.22 E-value=1.3e+02 Score=26.86 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=25.7
Q ss_pred cHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHH
Q 006863 326 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 374 (628)
Q Consensus 326 ~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~ 374 (628)
.+.+..+...+||.+|++.-.. ...+|..-..+|+.+.
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~y-----------~~~~p~~lK~~iD~~~ 98 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPIY-----------WFGMSGTLKLFIDRWS 98 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHTHH
T ss_pred CHHHHHHHHHhCCEEEEEeCcc-----------ccCCcHHHHHHHHHhH
Confidence 4556667788999999876322 2346776677777654
No 64
>3zuc_A Cellulosomal scaffoldin; crystalline cellulose-binding protein, sugar binding protein cellulosome; HET: EDO 1PE; 1.00A {Acetivibrio cellulolyticus} SCOP: b.2.2.0 PDB: 3zu8_A* 3zqw_A*
Probab=24.62 E-value=25 Score=31.76 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=28.1
Q ss_pred ccccc--cccCCCCeEEEEEEecCCCCeeEEeCCCCEE
Q 006863 565 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIRR 600 (628)
Q Consensus 565 ~gF~k--v~l~pGes~~V~~~l~~~~~ls~~d~~~~~~ 600 (628)
.+|.- -.|.||++.+|.|.|.. .+++-||....|-
T Consensus 89 I~F~~~ag~l~pg~~~eiq~Ri~~-~dws~~dqsnDyS 125 (153)
T 3zuc_A 89 IAFSSAAGTLAANTSIEVQGRFAK-SDWTNYNQADDYS 125 (153)
T ss_dssp EEECGGGCEECTTEEEEEEEEEEE-TTCCCEEGGGCTT
T ss_pred EEeCCCCceECCCCceEEEEEEEc-CCCcccccccCcc
Confidence 35665 46999999999999998 8999999766553
No 65
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=24.60 E-value=67 Score=26.14 Aligned_cols=18 Identities=17% Similarity=0.274 Sum_probs=13.9
Q ss_pred ccccccCCCCeEEEEEEe
Q 006863 567 FKKVHVTAGALQSVRLDI 584 (628)
Q Consensus 567 F~kv~l~pGes~~V~~~l 584 (628)
|..+.|.|||+.+++|..
T Consensus 62 ~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 62 HKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp BCSCCCSTTCEEEEECCT
T ss_pred ccceeeCCCCEEEEEEec
Confidence 456679999998887754
No 66
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=24.58 E-value=1.7e+02 Score=27.97 Aligned_cols=53 Identities=13% Similarity=0.130 Sum_probs=32.5
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC--CCcchhhccccccccCCCCeEEEEEEec
Q 006863 530 GLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFKKVHVTAGALQSVRLDIH 585 (628)
Q Consensus 530 ~vsv~VtNtG~~~G~evvQlY~~~p~~~--~~P~k~L~gF~kv~l~pGes~~V~~~l~ 585 (628)
.++++|+|+|+.. --.||..+.+-... ..|..-.==. ..|+||+.++|+|...
T Consensus 17 ~~sl~l~N~~~~~-p~LvQsWid~~~~~~~~~pfivtPPl--fRlep~~~q~lRIi~~ 71 (224)
T 3gfu_C 17 ALTITVTNNDKER-TFGGQAWVDNIVEKDTRPTFVVTPSF--FKVKPNGQQTLRIIMA 71 (224)
T ss_dssp CEEEEEEECCSSC-CEEEEEEEEESSCCSCSCSEEEESSE--EEECTTCEEEEEEEEC
T ss_pred eEEEEEEeCCCCc-cEEEEEEEecCCCCcccCCEEEcCCe--EEECCCCceEEEEEEC
Confidence 4789999999753 35799999863221 1110000000 1389999999999654
No 67
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=24.11 E-value=40 Score=34.39 Aligned_cols=56 Identities=18% Similarity=0.314 Sum_probs=32.8
Q ss_pred HHhhcCCEEEEEEeCCCccccccCCCCCCCCChh----HHHHHHHHHHhcCCCEEEEEecCceeee
Q 006863 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGR----QQELVSRVAKASRGPVVLVLMCGGPVDV 393 (628)
Q Consensus 332 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~----q~~li~~v~~~~~k~vVvVl~~g~P~~l 393 (628)
+..+.||+||++.|... .+|.+|.++ -.. -.++++++.+.+.+-+++++. +||+++
T Consensus 75 ~~~~daDvVvitAg~pr---kpG~tR~dl--l~~N~~i~~~i~~~i~~~~~~~~~vivv-sNPvd~ 134 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPR---RDGMERKDL--LKANVKIFKCQGAALDKYAKKSVKVIVV-GNPANT 134 (333)
T ss_dssp HHTTTCSEEEECCSCCC---CTTCCTTTT--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhCCCCeEEEEc-CCchHH
Confidence 45789999999876543 345566543 122 235566666654433333334 599887
No 68
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=24.05 E-value=1.1e+02 Score=29.32 Aligned_cols=57 Identities=18% Similarity=0.344 Sum_probs=42.2
Q ss_pred HHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHHhhc--CCCcEEEcchhhhhhhhccccccCChHHHHHHHHHcCC
Q 006863 99 FKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQW--RLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGL 176 (628)
Q Consensus 99 F~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~--gf~G~v~SD~~~~~~~~~~~~~~~~~~~a~~~al~AG~ 176 (628)
+++++++| +.-|++ | +.++.++.--.+... .++|.++.++. ++.| +.+|+++|.
T Consensus 78 a~~ai~AG-A~fivs--------P-~~~~evi~~~~~~~v~~~~~~~~~PG~~-------------TptE-~~~A~~~Ga 133 (217)
T 3lab_A 78 FQKAIDAG-AQFIVS--------P-GLTPELIEKAKQVKLDGQWQGVFLPGVA-------------TASE-VMIAAQAGI 133 (217)
T ss_dssp HHHHHHHT-CSEEEE--------S-SCCHHHHHHHHHHHHHCSCCCEEEEEEC-------------SHHH-HHHHHHTTC
T ss_pred HHHHHHcC-CCEEEe--------C-CCcHHHHHHHHHcCCCccCCCeEeCCCC-------------CHHH-HHHHHHcCC
Confidence 56788888 776665 3 368888877766655 67899999874 3344 467899999
Q ss_pred CcC
Q 006863 177 DLD 179 (628)
Q Consensus 177 D~~ 179 (628)
|++
T Consensus 134 d~v 136 (217)
T 3lab_A 134 TQL 136 (217)
T ss_dssp CEE
T ss_pred CEE
Confidence 987
No 69
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=24.00 E-value=1.6e+02 Score=34.21 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=39.7
Q ss_pred eEEEEEEEEeCCC-CCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGD-MAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~-~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 586 (628)
.+.+.++|.|..+ .+++--|+|....+... ..+. ...=+++.|+||++++|.|.|.+
T Consensus 96 ~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~--~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 96 QVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTK--RRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp CEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSS--SCEEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCC--CcceeEEEECCCCeEEEEEEEEE
Confidence 6899999999999 88877777654433211 1110 01114567999999999999987
No 70
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=23.80 E-value=90 Score=28.75 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHH
Q 006863 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 374 (628)
Q Consensus 327 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~ 374 (628)
+.+..+....||.+|++.=.. ...+|..-..+|+.+.
T Consensus 85 ~~~~~~~l~~aD~iv~~~P~y-----------~~~~pa~lK~~iD~~~ 121 (208)
T 2hpv_A 85 FNELTDQFLSADKVVIANPMW-----------NLNVPTRLKAWVDTIN 121 (208)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEeccc-----------cCCCCHHHHHHHHHHh
Confidence 455667788999999865221 3457888888888875
No 71
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=23.69 E-value=1.4e+02 Score=27.19 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=39.5
Q ss_pred cccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHH----------hcCCCEEEEEecCcee
Q 006863 324 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK----------ASRGPVVLVLMCGGPV 391 (628)
Q Consensus 324 ~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~----------~~~k~vVvVl~~g~P~ 391 (628)
..++.+..+....||.+|+..=.. .+..|..-+.+++.+.. -.+|++++++.+|+|-
T Consensus 39 ~~D~~~~~~~l~~aD~iV~~~P~y-----------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 39 DFNVEQEQSLLLQNDRIILEFPLY-----------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp TCCHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred cccHHHHHHHHHhCCEEEEECChh-----------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 345677788999999999865221 34577777788887632 1357777777777774
No 72
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=23.10 E-value=15 Score=37.08 Aligned_cols=54 Identities=15% Similarity=0.360 Sum_probs=32.6
Q ss_pred HhhcCCEEEEEEeCCCccccccCCCCCCCCChhH----HHHHHHHHHhcCCCEEEEEecCceeee
Q 006863 333 AARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (628)
Q Consensus 333 ~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q----~~li~~v~~~~~k~vVvVl~~g~P~~l 393 (628)
..+.||+||++.|... ..|.+|.+|- ..- .++++++++.+++ .++++. .||++.
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl--~~Na~I~~~i~~~i~~~~p~-aivlvv-sNPvd~ 123 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLA--HKNAGIIKDIAKKIVENAPE-SKILVV-TNPMDV 123 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHH--HHHHHHHHHHHHHHHTTSTT-CEEEEC-SSSHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHH--HHHHHHHHHHHHHHHhcCCc-eEEEEe-cCcchh
Confidence 4679999999988654 3454554431 111 3456666665544 444444 599986
No 73
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=23.03 E-value=2.1e+02 Score=31.68 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=47.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCC---CCcchhhccccccccCCCCeEEEEEEecCCCCeeEEeCCCCEEecCe
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMG 604 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G 604 (628)
+.+++-+|||.|...+...+. +..|.+. ..|. .|. |. +.||++++++++.. . .++.|. .|
T Consensus 538 ~~t~~rtvtnvg~~~~ty~~~--v~~p~gv~v~V~P~-~l~-f~----~~~~~~~~~vt~~~-~------~~~~~~--~g 600 (621)
T 3vta_A 538 NQYFNRTLTSVAPQASTYRAM--ISAPQGLTISVNPN-VLS-FN----GLGDRKSFTLTVRG-S------IKGFVV--SA 600 (621)
T ss_dssp EEEEEEEEEECSSSCEEEEEE--EECCSSEEEEEESS-EEE-EC----STTCEEEEEEEEEE-C------CCSSEE--EE
T ss_pred EEEEEEEEEccCCCCeEEEEE--EECCCCcEEEEecC-EEE-Ec----CCCcEEEEEEEEEe-c------CCCceE--EE
Confidence 578888999999876554444 4566552 3444 232 22 67999888888764 2 234443 25
Q ss_pred EEEEEEeCCCCeeEEEEEEe
Q 006863 605 EHSLHIGDLKHSISLQANLE 624 (628)
Q Consensus 605 ~y~i~vG~ss~~~~~~~~~~ 624 (628)
..+. .+..|.+|.-+.|+
T Consensus 601 ~l~w--~d~~h~Vr~Pi~v~ 618 (621)
T 3vta_A 601 SLVW--SDGVHYVRSPITIT 618 (621)
T ss_dssp EEEE--ECSSCCCEEEEEEE
T ss_pred EEEE--EcCCEEEEeCEEEE
Confidence 4443 45667777777665
No 74
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=22.79 E-value=1e+02 Score=29.24 Aligned_cols=38 Identities=13% Similarity=0.308 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHH
Q 006863 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 375 (628)
Q Consensus 327 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~ 375 (628)
..+..+....||.+|++.=.. +..+|..-..+|+.+..
T Consensus 85 ~~~l~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~ 122 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLPLH-----------NFNIPSKLKDYMDNIMI 122 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------hccCCHHHHHHHHHHhh
Confidence 345677888999999876322 35678888888888753
No 75
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=22.22 E-value=1.1e+02 Score=27.80 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=24.8
Q ss_pred HHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHH
Q 006863 328 GAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 374 (628)
Q Consensus 328 ~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~ 374 (628)
.+..+....||.+|++.=. + ...+|..-..+|+.+.
T Consensus 78 ~~~~~~l~~aD~iv~~~P~---y--------~~~~p~~lK~~iD~~~ 113 (201)
T 1t5b_A 78 DELIAELKAHDVIVIAAPM---Y--------NFNIPTQLKNYFDLIA 113 (201)
T ss_dssp HHHHHHHHHCSEEEEECCC---B--------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHhCCEEEEEeCc---c--------cCcCCHHHHHHHHHhe
Confidence 4456677899999986421 1 2456787788888875
No 76
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=21.86 E-value=40 Score=34.34 Aligned_cols=57 Identities=21% Similarity=0.283 Sum_probs=28.5
Q ss_pred HHhhcCCEEEEEEeCCCccccccCCCCCCCC-C-hhHHHHHHHHHHhcCCCEEEEEecCceeee
Q 006863 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (628)
Q Consensus 332 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L-~-~~q~~li~~v~~~~~k~vVvVl~~g~P~~l 393 (628)
+..+.||+||++.|... .+|.+|.+|-- . +--.++++++.+.++ ..++++. +||+++
T Consensus 72 ~a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvv-tNPvdi 130 (326)
T 3vku_A 72 SDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA-ANPVDI 130 (326)
T ss_dssp GGGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTC-CSEEEEC-SSSHHH
T ss_pred HHhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEc-cCchHH
Confidence 35789999999988543 34556655421 1 113456667766544 3444444 599987
No 77
>2l8a_A Endoglucanase; carbohydrate-binding module, family 3, hydrolase; NMR {Bacillus subtilis}
Probab=21.79 E-value=23 Score=31.78 Aligned_cols=36 Identities=22% Similarity=0.372 Sum_probs=28.8
Q ss_pred ccccccccCCC-CeEEEEEEecCCCCeeEEeCCCCEEe
Q 006863 565 IGFKKVHVTAG-ALQSVRLDIHVCKHLSVVDKFGIRRI 601 (628)
Q Consensus 565 ~gF~kv~l~pG-es~~V~~~l~~~~~ls~~d~~~~~~~ 601 (628)
.+|....|.|| ++.+|.|.|.. .+.+-||....|-.
T Consensus 86 I~f~~g~l~pg~~s~eiq~ri~~-~dws~~dqsNDyS~ 122 (149)
T 2l8a_A 86 LGFKNGTLAPGASTGNIQLRLHN-DDWSNYAQSGDYSF 122 (149)
T ss_dssp EEECCSCSSTTSSSSCEEEEEEC-CTTSCCCTTTTTTT
T ss_pred EEeCCCeECCCCCceEEEEEEEc-CCCCccccCCCccc
Confidence 46877889998 45899999998 89998997766543
No 78
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=21.54 E-value=38 Score=34.61 Aligned_cols=53 Identities=19% Similarity=0.149 Sum_probs=32.9
Q ss_pred hhcCCEEEEEEeCCCccccccCCCCCCCCChhH----HHHHHHHHHhcCCCEEEEEecCceeee
Q 006863 334 ARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (628)
Q Consensus 334 a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q----~~li~~v~~~~~k~vVvVl~~g~P~~l 393 (628)
.+.||+||++.|... .+|.+|.++- ..- .++++++.+.++ ..++++. +||+++
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dll--~~N~~I~k~i~~~I~k~~P-~a~ilvv-tNPvdi 143 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNLV--QRNVNIFKFIIPNIVKHSP-DCLKELH-PELGTD 143 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGGG--HHHHHHHHHHHHHHHHHCT-TCEEEEC-SSSHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHHH--HhhHHHHHHHHHHHHhhCC-CceEEeC-CCccHH
Confidence 679999999988653 4555665432 222 345566666543 4554444 599887
No 79
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=20.89 E-value=1.3e+02 Score=27.62 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=28.5
Q ss_pred ccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHH
Q 006863 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 375 (628)
Q Consensus 325 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~ 375 (628)
..+.+..+....||.+|++. .. + +...|+.-+.+|+.+..
T Consensus 56 ~~~~~~~~~i~~AD~iV~~s--P~-y--------~~~~p~~lK~~iD~~~~ 95 (192)
T 3fvw_A 56 PEVAHAREEVQEADAIWIFS--PV-Y--------NYAIPGPVKNLLDWLSR 95 (192)
T ss_dssp HHHHHHHHHHHHCSEEEEEC--CC-B--------TTBCCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCEEEEEC--cc-c--------ccCCCHHHHHHHHHhhc
Confidence 34566778889999999864 21 1 34678888888888763
No 80
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=20.70 E-value=1e+02 Score=34.55 Aligned_cols=57 Identities=12% Similarity=-0.002 Sum_probs=41.1
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCC--CCCcchhhccc-cccccCCCCeEEEEEEecC
Q 006863 528 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 586 (628)
Q Consensus 528 ~~~vsv~VtNtG~~~G~evvQlY~~~p~~--~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 586 (628)
.+.++++++|..+.. ..|+++++.-.- .+.+..+++-= ..+.|+|+|++++.++|..
T Consensus 497 df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y 556 (692)
T 1vjj_A 497 EVNLVLLLKNLSRDT--KTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISY 556 (692)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECH
Confidence 589999999999866 568888765322 25555444221 2456899999999999986
No 81
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=20.48 E-value=1.7e+02 Score=26.85 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=28.8
Q ss_pred ccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCCCCChhHHHHHHHHHH
Q 006863 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 375 (628)
Q Consensus 325 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~li~~v~~ 375 (628)
+.+.+..+....||.+|++.=.. +..+|+.-+.+|+.+..
T Consensus 61 ~~~~~l~~~i~~AD~iv~~sP~y-----------~~~~~~~lK~~iD~~~~ 100 (193)
T 3svl_A 61 ATVEALAEQIRQADGVVIVTPEY-----------NYSVPGGLKNAIDWLSR 100 (193)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCEEEEEeccc-----------CCCCCHHHHHHHHHHhh
Confidence 44566778889999999865221 34578888888888764
Done!