Query 006864
Match_columns 628
No_of_seqs 418 out of 2842
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 10:59:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygy_A PGDH, D-3-phosphoglycer 100.0 1E-101 4E-106 867.9 61.5 520 88-627 2-523 (529)
2 1sc6_A PGDH, D-3-phosphoglycer 100.0 1.6E-79 5.6E-84 666.0 41.7 389 89-628 3-401 (404)
3 3k5p_A D-3-phosphoglycerate de 100.0 4.5E-73 1.5E-77 614.4 41.4 392 87-628 12-413 (416)
4 4g2n_A D-isomer specific 2-hyd 100.0 5.3E-70 1.8E-74 579.7 39.0 316 85-402 23-345 (345)
5 4e5n_A Thermostable phosphite 100.0 1.8E-68 6.3E-73 565.7 35.9 314 90-404 2-328 (330)
6 4dgs_A Dehydrogenase; structur 100.0 6.5E-68 2.2E-72 562.6 31.0 315 82-402 22-340 (340)
7 3kb6_A D-lactate dehydrogenase 100.0 1.5E-67 5E-72 559.5 28.4 275 127-403 39-329 (334)
8 2pi1_A D-lactate dehydrogenase 100.0 1.9E-66 6.4E-71 551.0 27.2 311 92-404 2-330 (334)
9 3gg9_A D-3-phosphoglycerate de 100.0 2.2E-65 7.6E-70 546.0 33.0 315 91-409 3-340 (352)
10 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 7.5E-65 2.6E-69 538.8 35.9 310 88-399 24-334 (335)
11 4hy3_A Phosphoglycerate oxidor 100.0 2.1E-65 7.1E-70 547.5 31.5 310 90-403 27-349 (365)
12 3hg7_A D-isomer specific 2-hyd 100.0 6.2E-66 2.1E-70 544.1 26.4 313 87-407 2-316 (324)
13 2yq5_A D-isomer specific 2-hyd 100.0 3.3E-65 1.1E-69 542.5 30.2 312 90-403 1-333 (343)
14 3jtm_A Formate dehydrogenase, 100.0 3.1E-65 1.1E-69 544.4 29.8 314 88-402 17-341 (351)
15 3evt_A Phosphoglycerate dehydr 100.0 1.7E-65 6E-70 541.1 25.0 311 90-406 1-315 (324)
16 1wwk_A Phosphoglycerate dehydr 100.0 9.3E-64 3.2E-68 525.0 36.3 305 89-394 2-307 (307)
17 1j4a_A D-LDH, D-lactate dehydr 100.0 4.6E-63 1.6E-67 525.3 34.4 310 91-403 2-332 (333)
18 1dxy_A D-2-hydroxyisocaproate 100.0 3.4E-63 1.1E-67 526.2 29.6 311 92-405 2-332 (333)
19 2ekl_A D-3-phosphoglycerate de 100.0 4E-62 1.4E-66 513.9 36.5 304 90-397 5-312 (313)
20 1gdh_A D-glycerate dehydrogena 100.0 7.1E-62 2.4E-66 513.5 38.4 306 90-398 1-315 (320)
21 1xdw_A NAD+-dependent (R)-2-hy 100.0 1.8E-62 6.1E-67 520.3 30.5 308 92-402 2-331 (331)
22 2cuk_A Glycerate dehydrogenase 100.0 1.2E-61 4.2E-66 509.7 35.2 304 91-401 1-310 (311)
23 2j6i_A Formate dehydrogenase; 100.0 1.6E-62 5.4E-67 526.7 28.5 314 88-402 15-345 (364)
24 2w2k_A D-mandelate dehydrogena 100.0 1.7E-61 6E-66 516.0 35.4 321 88-409 1-345 (348)
25 3ba1_A HPPR, hydroxyphenylpyru 100.0 2.7E-61 9.3E-66 511.3 35.8 309 88-402 21-333 (333)
26 2nac_A NAD-dependent formate d 100.0 1.7E-61 6E-66 521.8 34.6 298 105-403 61-367 (393)
27 1mx3_A CTBP1, C-terminal bindi 100.0 7.5E-61 2.6E-65 510.4 33.8 315 87-402 18-346 (347)
28 2d0i_A Dehydrogenase; structur 100.0 9.9E-61 3.4E-65 507.4 33.5 312 90-404 2-320 (333)
29 2dbq_A Glyoxylate reductase; D 100.0 6.7E-60 2.3E-64 501.2 36.5 311 90-402 2-322 (334)
30 2gcg_A Glyoxylate reductase/hy 100.0 6.2E-60 2.1E-64 500.7 36.2 318 86-403 4-330 (330)
31 3pp8_A Glyoxylate/hydroxypyruv 100.0 1.8E-60 6.3E-65 501.2 27.2 299 91-403 4-311 (315)
32 1qp8_A Formate dehydrogenase; 100.0 6.5E-59 2.2E-63 487.3 28.0 292 92-403 2-297 (303)
33 3oet_A Erythronate-4-phosphate 100.0 2.5E-57 8.7E-62 486.2 28.2 281 89-399 2-288 (381)
34 3gvx_A Glycerate dehydrogenase 100.0 1.4E-56 4.8E-61 466.3 21.7 278 92-397 2-285 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 1.6E-54 5.5E-59 465.4 29.0 282 92-401 2-287 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 1.4E-39 4.8E-44 357.8 -0.5 275 152-454 192-477 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 7.1E-40 2.4E-44 361.4 -3.9 274 152-454 212-492 (494)
38 3d4o_A Dipicolinate synthase s 100.0 2.1E-28 7.2E-33 254.6 16.0 206 88-323 3-248 (293)
39 3ce6_A Adenosylhomocysteinase; 99.9 5.3E-29 1.8E-33 275.5 0.1 273 153-454 210-492 (494)
40 2rir_A Dipicolinate synthase, 99.9 3.9E-26 1.3E-30 238.1 14.1 210 88-323 5-250 (300)
41 2vhw_A Alanine dehydrogenase; 99.9 2.5E-23 8.5E-28 223.9 21.0 245 99-375 18-307 (377)
42 2eez_A Alanine dehydrogenase; 99.8 2E-19 6.8E-24 192.9 15.8 277 99-403 18-342 (369)
43 1gtm_A Glutamate dehydrogenase 99.8 8.3E-21 2.8E-25 206.3 3.4 155 224-393 206-386 (419)
44 1x13_A NAD(P) transhydrogenase 99.8 9.8E-19 3.3E-23 189.6 16.3 220 99-326 25-301 (401)
45 1l7d_A Nicotinamide nucleotide 99.8 1.3E-17 4.4E-22 179.8 18.3 220 99-323 18-300 (384)
46 3h9u_A Adenosylhomocysteinase; 99.7 1.9E-17 6.4E-22 179.5 13.8 183 131-332 123-312 (436)
47 3n58_A Adenosylhomocysteinase; 99.7 9.8E-17 3.4E-21 173.7 12.8 155 159-331 190-347 (464)
48 1gpj_A Glutamyl-tRNA reductase 99.7 8.7E-18 3E-22 182.2 0.4 210 153-396 81-326 (404)
49 3gvp_A Adenosylhomocysteinase 99.6 2.6E-15 9E-20 162.4 12.6 159 153-329 156-318 (435)
50 3ggo_A Prephenate dehydrogenas 99.5 3.9E-15 1.3E-19 156.3 4.3 237 226-483 30-292 (314)
51 3ktd_A Prephenate dehydrogenas 99.4 4.7E-15 1.6E-19 157.3 -2.1 242 229-482 8-270 (341)
52 2g5c_A Prephenate dehydrogenas 99.3 1.3E-11 4.5E-16 126.3 13.3 213 230-462 2-239 (281)
53 1c1d_A L-phenylalanine dehydro 99.2 2.6E-11 8.8E-16 129.0 12.3 109 224-339 169-280 (355)
54 3p2y_A Alanine dehydrogenase/p 99.2 4.5E-10 1.5E-14 120.3 21.8 210 99-319 40-302 (381)
55 4dll_A 2-hydroxy-3-oxopropiona 99.2 1.2E-11 4.2E-16 129.6 8.0 131 209-339 6-144 (320)
56 3l6d_A Putative oxidoreductase 99.2 1.7E-11 5.7E-16 127.8 8.2 126 225-350 5-132 (306)
57 4dio_A NAD(P) transhydrogenase 99.2 6.3E-10 2.1E-14 120.0 19.9 180 129-319 89-312 (405)
58 3obb_A Probable 3-hydroxyisobu 99.2 3.1E-11 1.1E-15 125.8 9.0 113 230-344 4-120 (300)
59 3doj_A AT3G25530, dehydrogenas 99.2 4.4E-11 1.5E-15 124.8 9.4 115 224-338 16-134 (310)
60 2d5c_A AROE, shikimate 5-dehyd 99.2 8.8E-12 3E-16 127.0 3.6 176 118-335 37-220 (263)
61 4ezb_A Uncharacterized conserv 99.2 7E-11 2.4E-15 123.9 10.4 138 208-350 5-152 (317)
62 3qsg_A NAD-binding phosphogluc 99.2 9.4E-11 3.2E-15 122.5 11.1 140 209-350 2-150 (312)
63 4gbj_A 6-phosphogluconate dehy 99.1 4.6E-11 1.6E-15 124.2 8.4 120 230-349 6-127 (297)
64 3qha_A Putative oxidoreductase 99.1 8.5E-11 2.9E-15 121.8 9.8 117 229-347 15-133 (296)
65 4e21_A 6-phosphogluconate dehy 99.1 1.5E-10 5.2E-15 123.5 11.1 121 227-349 20-145 (358)
66 3b1f_A Putative prephenate deh 99.1 2.4E-10 8.2E-15 117.4 11.9 139 230-372 7-158 (290)
67 3pef_A 6-phosphogluconate dehy 99.1 1.1E-10 3.9E-15 120.0 9.1 109 230-338 2-114 (287)
68 1np3_A Ketol-acid reductoisome 99.1 3.8E-11 1.3E-15 127.0 5.3 138 225-372 12-157 (338)
69 3ond_A Adenosylhomocysteinase; 99.1 3.5E-10 1.2E-14 124.4 12.2 152 153-322 201-355 (488)
70 2h78_A Hibadh, 3-hydroxyisobut 99.1 9.4E-11 3.2E-15 121.3 6.9 109 230-338 4-116 (302)
71 3pdu_A 3-hydroxyisobutyrate de 99.1 1.1E-10 3.9E-15 119.9 7.4 109 230-338 2-114 (287)
72 2pv7_A T-protein [includes: ch 99.1 3.9E-10 1.3E-14 117.0 11.1 137 207-369 4-142 (298)
73 3g0o_A 3-hydroxyisobutyrate de 99.1 1.3E-10 4.3E-15 120.7 7.3 110 229-338 7-121 (303)
74 4e12_A Diketoreductase; oxidor 99.1 1.4E-09 4.8E-14 111.9 14.4 131 230-372 5-163 (283)
75 2iaf_A Hypothetical protein SD 99.0 1.5E-10 5.1E-15 108.3 6.0 112 421-544 13-145 (151)
76 2hk9_A Shikimate dehydrogenase 99.0 2.1E-10 7.2E-15 117.8 6.4 165 118-320 48-222 (275)
77 2f1k_A Prephenate dehydrogenas 99.0 4.5E-09 1.6E-13 107.1 14.1 137 230-372 1-144 (279)
78 1vpd_A Tartronate semialdehyde 98.9 1.5E-09 5.2E-14 111.6 7.8 109 230-338 6-118 (299)
79 4gwg_A 6-phosphogluconate dehy 98.9 3.4E-09 1.2E-13 117.2 10.3 120 229-349 4-133 (484)
80 2yjz_A Metalloreductase steap4 98.4 2.7E-10 9.3E-15 111.8 0.0 94 227-324 17-110 (201)
81 3dtt_A NADP oxidoreductase; st 98.9 2E-09 6.8E-14 108.4 6.3 102 216-320 6-125 (245)
82 3fr7_A Putative ketol-acid red 98.8 1.7E-09 5.8E-14 118.3 6.1 104 214-321 39-156 (525)
83 3cky_A 2-hydroxymethyl glutara 98.8 3.1E-09 1.1E-13 109.4 7.6 107 230-336 5-115 (301)
84 1yb4_A Tartronic semialdehyde 98.8 3E-09 1E-13 109.1 7.4 106 230-336 4-113 (295)
85 2gf2_A Hibadh, 3-hydroxyisobut 98.8 3.5E-09 1.2E-13 108.7 7.8 106 230-335 1-110 (296)
86 2cvz_A Dehydrogenase, 3-hydrox 98.8 3.8E-09 1.3E-13 107.9 7.8 106 230-337 2-108 (289)
87 2zyd_A 6-phosphogluconate dehy 98.8 8.7E-09 3E-13 114.0 10.6 112 226-338 12-132 (480)
88 2uyy_A N-PAC protein; long-cha 98.8 7.4E-09 2.5E-13 107.6 8.5 107 230-336 31-141 (316)
89 1i36_A Conserved hypothetical 98.8 9.8E-09 3.3E-13 103.8 8.2 102 230-336 1-105 (264)
90 2p4q_A 6-phosphogluconate dehy 98.8 2.1E-08 7.3E-13 111.3 11.2 109 229-338 10-128 (497)
91 1zej_A HBD-9, 3-hydroxyacyl-CO 98.7 2E-08 6.9E-13 104.2 10.0 130 227-372 10-149 (293)
92 1leh_A Leucine dehydrogenase; 98.7 1.5E-08 5.3E-13 108.1 9.1 106 226-338 170-278 (364)
93 1pjc_A Protein (L-alanine dehy 98.7 3.3E-07 1.1E-11 97.6 18.3 180 130-319 66-267 (361)
94 3k6j_A Protein F01G10.3, confi 98.7 6.7E-08 2.3E-12 106.1 13.1 169 183-372 12-208 (460)
95 2iz1_A 6-phosphogluconate dehy 98.7 3.4E-08 1.2E-12 109.0 10.4 117 230-347 6-131 (474)
96 2dpo_A L-gulonate 3-dehydrogen 98.7 5.4E-08 1.8E-12 102.2 11.3 131 230-372 7-165 (319)
97 2pgd_A 6-phosphogluconate dehy 98.7 3.4E-08 1.1E-12 109.3 10.2 117 230-347 3-129 (482)
98 2q3e_A UDP-glucose 6-dehydroge 98.6 8.3E-08 2.8E-12 105.7 11.6 134 230-365 6-181 (467)
99 2vns_A Metalloreductase steap3 98.6 3.3E-08 1.1E-12 97.6 7.5 94 228-325 27-121 (215)
100 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.6 7.3E-08 2.5E-12 106.5 10.4 117 230-347 2-131 (478)
101 2raf_A Putative dinucleotide-b 98.6 6.4E-08 2.2E-12 95.2 7.5 81 224-323 14-94 (209)
102 3d1l_A Putative NADP oxidoredu 98.6 3.3E-08 1.1E-12 100.1 5.5 108 223-334 4-115 (266)
103 3c24_A Putative oxidoreductase 98.6 4.2E-08 1.4E-12 100.6 5.8 91 230-322 12-104 (286)
104 3gt0_A Pyrroline-5-carboxylate 98.6 3.7E-07 1.3E-11 91.7 12.3 103 230-336 3-112 (247)
105 3oj0_A Glutr, glutamyl-tRNA re 98.5 1.1E-07 3.7E-12 87.6 7.4 87 229-321 21-112 (144)
106 3pid_A UDP-glucose 6-dehydroge 98.5 3.4E-07 1.1E-11 99.8 10.9 115 222-338 29-172 (432)
107 1f0y_A HCDH, L-3-hydroxyacyl-C 98.5 6.9E-07 2.3E-11 92.4 12.7 130 230-371 16-177 (302)
108 2ahr_A Putative pyrroline carb 98.4 7.7E-07 2.6E-11 89.6 10.7 101 230-338 4-108 (259)
109 2izz_A Pyrroline-5-carboxylate 98.4 3.2E-07 1.1E-11 96.0 8.0 104 228-335 21-132 (322)
110 3tri_A Pyrroline-5-carboxylate 98.4 9.8E-07 3.4E-11 90.6 11.0 109 229-341 3-119 (280)
111 1mv8_A GMD, GDP-mannose 6-dehy 98.4 8.6E-07 2.9E-11 96.7 10.9 106 230-335 1-140 (436)
112 1yqg_A Pyrroline-5-carboxylate 98.3 3.3E-07 1.1E-11 92.4 5.6 101 230-339 1-107 (263)
113 3mog_A Probable 3-hydroxybutyr 98.3 1.6E-06 5.4E-11 96.0 10.8 130 229-371 5-161 (483)
114 2i99_A MU-crystallin homolog; 98.3 7.5E-07 2.6E-11 93.0 7.7 90 228-323 134-230 (312)
115 3dfu_A Uncharacterized protein 98.3 1E-06 3.6E-11 88.3 7.9 133 229-414 6-139 (232)
116 3p2o_A Bifunctional protein fo 98.3 6E-06 2.1E-10 84.9 13.5 81 223-322 154-235 (285)
117 4a7p_A UDP-glucose dehydrogena 98.2 3.4E-06 1.2E-10 92.4 11.4 105 230-335 9-145 (446)
118 2rcy_A Pyrroline carboxylate r 98.2 1.6E-06 5.6E-11 87.1 7.9 98 229-336 4-106 (262)
119 1zcj_A Peroxisomal bifunctiona 98.2 4.1E-06 1.4E-10 92.1 11.6 131 229-372 37-192 (463)
120 3gg2_A Sugar dehydrogenase, UD 98.2 2.9E-06 9.8E-11 93.1 10.1 105 230-335 3-138 (450)
121 1jay_A Coenzyme F420H2:NADP+ o 98.2 1.2E-06 4.2E-11 85.2 6.0 114 230-350 1-136 (212)
122 1bg6_A N-(1-D-carboxylethyl)-L 98.2 3.6E-06 1.2E-10 88.3 9.7 103 230-335 5-124 (359)
123 2ew2_A 2-dehydropantoate 2-red 98.1 2.2E-06 7.5E-11 88.0 6.4 107 230-339 4-127 (316)
124 4huj_A Uncharacterized protein 98.1 4.1E-06 1.4E-10 82.7 7.6 108 229-340 23-146 (220)
125 1dlj_A UDP-glucose dehydrogena 98.1 7.9E-06 2.7E-10 88.2 10.1 106 230-338 1-136 (402)
126 2o3j_A UDP-glucose 6-dehydroge 98.1 8.6E-06 3E-10 90.0 10.4 106 230-335 10-151 (481)
127 1txg_A Glycerol-3-phosphate de 98.1 4.9E-06 1.7E-10 86.5 7.4 103 230-335 1-124 (335)
128 2y0c_A BCEC, UDP-glucose dehyd 98.0 9.6E-06 3.3E-10 89.6 9.4 104 230-334 9-143 (478)
129 3k96_A Glycerol-3-phosphate de 98.0 1.2E-05 4.1E-10 85.5 9.7 104 229-334 29-152 (356)
130 1y7p_A Hypothetical protein AF 98.0 5.1E-06 1.7E-10 81.6 6.1 68 560-627 6-76 (223)
131 1wdk_A Fatty oxidation complex 98.0 1.2E-05 4E-10 93.1 9.8 113 230-347 315-454 (715)
132 1b0a_A Protein (fold bifunctio 98.0 1.2E-05 4E-10 82.8 8.6 82 223-323 153-235 (288)
133 3ojo_A CAP5O; rossmann fold, c 98.0 1.6E-05 5.6E-10 86.6 10.2 107 227-333 9-143 (431)
134 1x0v_A GPD-C, GPDH-C, glycerol 98.0 7.6E-06 2.6E-10 86.0 7.3 92 230-323 9-128 (354)
135 4a26_A Putative C-1-tetrahydro 98.0 1.2E-05 4E-10 83.3 8.4 81 223-322 159-242 (300)
136 4a5o_A Bifunctional protein fo 98.0 1.4E-05 4.9E-10 82.0 9.0 81 223-322 155-236 (286)
137 3ulk_A Ketol-acid reductoisome 98.0 1.1E-05 3.9E-10 87.0 8.5 94 226-322 34-134 (491)
138 3g79_A NDP-N-acetyl-D-galactos 98.0 1.3E-05 4.3E-10 88.6 9.0 102 230-331 19-159 (478)
139 3l07_A Bifunctional protein fo 98.0 1.8E-05 6E-10 81.4 9.3 81 223-322 155-236 (285)
140 1evy_A Glycerol-3-phosphate de 98.0 2.3E-06 7.9E-11 90.7 2.6 92 231-323 17-128 (366)
141 2dc1_A L-aspartate dehydrogena 98.0 1.4E-05 4.9E-10 79.5 8.3 95 230-335 1-100 (236)
142 2c2x_A Methylenetetrahydrofola 98.0 1.9E-05 6.7E-10 80.9 9.2 81 224-323 153-236 (281)
143 3ngx_A Bifunctional protein fo 97.9 2E-05 6.9E-10 80.6 9.2 77 227-322 148-225 (276)
144 2wtb_A MFP2, fatty acid multif 97.9 2.7E-05 9.3E-10 90.2 11.2 113 230-347 313-452 (725)
145 1a4i_A Methylenetetrahydrofola 97.9 2.1E-05 7.3E-10 81.3 9.2 83 223-324 159-242 (301)
146 3phh_A Shikimate dehydrogenase 97.9 2E-05 6.7E-10 80.7 8.8 105 229-336 118-224 (269)
147 1edz_A 5,10-methylenetetrahydr 97.9 7E-06 2.4E-10 85.9 5.3 93 223-321 171-277 (320)
148 1ks9_A KPA reductase;, 2-dehyd 97.9 9.1E-06 3.1E-10 82.4 6.0 102 230-334 1-111 (291)
149 2qyt_A 2-dehydropantoate 2-red 97.9 4.2E-06 1.4E-10 86.2 3.3 106 230-338 9-135 (317)
150 1y81_A Conserved hypothetical 97.9 1E-05 3.6E-10 74.5 5.5 101 227-338 12-117 (138)
151 1z82_A Glycerol-3-phosphate de 97.9 1E-05 3.5E-10 84.7 6.1 86 229-321 14-113 (335)
152 3don_A Shikimate dehydrogenase 97.9 1.8E-05 6.2E-10 81.4 7.6 108 225-336 113-226 (277)
153 1yj8_A Glycerol-3-phosphate de 97.9 1.1E-05 3.8E-10 85.9 6.0 90 230-321 22-143 (375)
154 2egg_A AROE, shikimate 5-dehyd 97.9 3.8E-05 1.3E-09 79.6 9.8 106 225-335 137-254 (297)
155 3c85_A Putative glutathione-re 97.9 8.5E-06 2.9E-10 77.5 4.3 95 224-320 34-140 (183)
156 3ghy_A Ketopantoate reductase 97.8 1.4E-05 4.7E-10 83.9 5.8 109 229-340 3-143 (335)
157 3hdj_A Probable ornithine cycl 97.8 7.5E-05 2.6E-09 78.0 11.1 88 229-322 121-216 (313)
158 3u62_A Shikimate dehydrogenase 97.8 3.8E-05 1.3E-09 77.9 7.5 100 227-336 107-214 (253)
159 3i83_A 2-dehydropantoate 2-red 97.8 7.5E-05 2.6E-09 77.7 9.9 107 230-340 3-125 (320)
160 2g1u_A Hypothetical protein TM 97.8 4E-05 1.4E-09 71.0 7.0 99 222-322 12-121 (155)
161 2duw_A Putative COA-binding pr 97.7 1.6E-05 5.6E-10 73.7 4.0 102 229-339 13-119 (145)
162 3fwz_A Inner membrane protein 97.6 5E-05 1.7E-09 69.3 5.8 89 230-320 8-106 (140)
163 2i76_A Hypothetical protein; N 97.6 7.8E-06 2.7E-10 83.4 0.3 85 230-321 3-91 (276)
164 3hn2_A 2-dehydropantoate 2-red 97.6 0.00016 5.6E-09 74.9 10.2 107 230-341 3-124 (312)
165 2ko1_A CTR148A, GTP pyrophosph 97.6 6.8E-05 2.3E-09 62.5 5.6 65 561-627 8-75 (88)
166 1lss_A TRK system potassium up 97.6 0.00013 4.6E-09 65.1 8.0 88 229-318 4-102 (140)
167 3ic5_A Putative saccharopine d 97.6 0.00012 4E-09 63.5 7.2 98 228-331 4-111 (118)
168 3ado_A Lambda-crystallin; L-gu 97.6 0.00022 7.5E-09 74.7 10.4 130 229-368 6-163 (319)
169 1x7d_A Ornithine cyclodeaminas 97.6 0.00018 6.1E-09 76.3 9.3 90 228-321 128-228 (350)
170 3llv_A Exopolyphosphatase-rela 97.5 0.00013 4.4E-09 66.1 6.1 65 228-292 5-79 (141)
171 3o8q_A Shikimate 5-dehydrogena 97.4 8.8E-05 3E-09 76.3 5.0 96 224-322 121-224 (281)
172 2z2v_A Hypothetical protein PH 97.4 0.0001 3.4E-09 78.6 5.6 108 224-338 11-126 (365)
173 3hwr_A 2-dehydropantoate 2-red 97.4 0.00017 5.8E-09 75.1 7.1 107 227-339 17-138 (318)
174 1p77_A Shikimate 5-dehydrogena 97.4 0.0002 6.9E-09 73.0 6.5 71 225-295 115-192 (272)
175 1nyt_A Shikimate 5-dehydrogena 97.3 0.00037 1.3E-08 70.9 8.3 95 225-322 115-217 (271)
176 2qrj_A Saccharopine dehydrogen 97.3 0.00015 5.2E-09 77.7 5.6 83 228-319 213-300 (394)
177 2hmt_A YUAA protein; RCK, KTN, 97.3 0.00015 5.1E-09 65.1 4.7 94 227-322 4-107 (144)
178 3pwz_A Shikimate dehydrogenase 97.3 0.00032 1.1E-08 71.8 7.6 95 224-321 115-217 (272)
179 3vtf_A UDP-glucose 6-dehydroge 97.3 0.00064 2.2E-08 74.2 10.3 135 230-365 22-194 (444)
180 1omo_A Alanine dehydrogenase; 97.3 0.0005 1.7E-08 71.9 9.0 86 228-320 124-218 (322)
181 3ego_A Probable 2-dehydropanto 97.3 0.00021 7.2E-09 74.1 6.0 105 230-340 3-119 (307)
182 1vl6_A Malate oxidoreductase; 97.3 0.0015 5.2E-08 69.8 12.4 94 224-322 187-297 (388)
183 2ewd_A Lactate dehydrogenase,; 97.3 0.00034 1.2E-08 72.8 7.3 103 229-333 4-135 (317)
184 4hkt_A Inositol 2-dehydrogenas 97.2 0.00054 1.9E-08 71.3 8.1 64 230-293 4-73 (331)
185 3c7a_A Octopine dehydrogenase; 97.2 0.00076 2.6E-08 72.2 9.3 87 230-318 3-115 (404)
186 1guz_A Malate dehydrogenase; o 97.2 0.00092 3.1E-08 69.4 9.3 109 230-342 1-143 (310)
187 1a5z_A L-lactate dehydrogenase 97.2 0.00092 3.1E-08 69.7 9.2 110 230-341 1-140 (319)
188 3uuw_A Putative oxidoreductase 97.2 0.00083 2.8E-08 69.1 8.5 103 229-336 6-116 (308)
189 4b4u_A Bifunctional protein fo 97.1 0.00091 3.1E-08 69.1 8.6 79 223-320 173-252 (303)
190 2f1f_A Acetolactate synthase i 97.1 0.00045 1.5E-08 65.5 5.8 70 558-627 3-74 (164)
191 1id1_A Putative potassium chan 97.1 0.00054 1.9E-08 63.1 6.2 90 228-319 2-105 (153)
192 3euw_A MYO-inositol dehydrogen 97.1 0.00074 2.5E-08 70.6 8.0 64 230-293 5-75 (344)
193 1hyh_A L-hicdh, L-2-hydroxyiso 97.1 0.00054 1.8E-08 70.9 6.7 64 230-294 2-80 (309)
194 3db2_A Putative NADPH-dependen 97.1 0.0008 2.7E-08 70.7 7.9 65 230-294 6-77 (354)
195 1tlt_A Putative oxidoreductase 97.1 0.0015 5.2E-08 67.5 9.7 103 230-337 6-116 (319)
196 3fbt_A Chorismate mutase and s 97.1 0.0011 3.8E-08 68.1 8.6 91 224-320 117-215 (282)
197 1nvt_A Shikimate 5'-dehydrogen 97.1 0.0007 2.4E-08 69.4 7.0 94 225-321 124-232 (287)
198 1zpv_A ACT domain protein; str 97.0 0.00099 3.4E-08 55.9 6.4 62 559-622 6-70 (91)
199 2ho3_A Oxidoreductase, GFO/IDH 97.0 0.0014 4.9E-08 67.9 8.9 101 231-336 3-112 (325)
200 3jyo_A Quinate/shikimate dehyd 97.0 0.00078 2.7E-08 69.3 6.7 92 226-320 124-230 (283)
201 3e9m_A Oxidoreductase, GFO/IDH 97.0 0.0012 4E-08 68.9 8.0 65 230-294 6-78 (330)
202 1xea_A Oxidoreductase, GFO/IDH 97.0 0.0013 4.5E-08 68.2 8.3 103 230-337 3-114 (323)
203 2glx_A 1,5-anhydro-D-fructose 97.0 0.0013 4.5E-08 68.1 8.3 100 231-335 2-111 (332)
204 2ef0_A Ornithine carbamoyltran 97.0 0.01 3.5E-07 61.5 14.6 135 172-327 118-272 (301)
205 2v6b_A L-LDH, L-lactate dehydr 97.0 0.0008 2.7E-08 69.7 6.3 110 230-341 1-138 (304)
206 3tnl_A Shikimate dehydrogenase 97.0 0.002 6.7E-08 67.3 9.1 97 224-322 149-266 (315)
207 1pzg_A LDH, lactate dehydrogen 96.9 0.002 6.9E-08 67.6 9.1 113 230-342 10-157 (331)
208 2pc6_A Probable acetolactate s 96.9 0.00063 2.1E-08 64.5 4.7 69 559-627 5-75 (165)
209 3q2i_A Dehydrogenase; rossmann 96.9 0.00097 3.3E-08 70.1 6.2 63 230-292 14-84 (354)
210 2f06_A Conserved hypothetical 96.9 0.0015 5E-08 59.9 6.7 58 559-620 73-130 (144)
211 3rc1_A Sugar 3-ketoreductase; 96.9 0.0018 6E-08 68.2 8.1 105 227-336 25-139 (350)
212 3cea_A MYO-inositol 2-dehydrog 96.8 0.003 1E-07 65.8 9.4 64 230-293 9-81 (346)
213 2i6u_A Otcase, ornithine carba 96.8 0.022 7.6E-07 59.1 15.6 127 172-319 112-265 (307)
214 1iuk_A Hypothetical protein TT 96.8 0.0019 6.4E-08 59.4 6.6 101 229-338 13-118 (140)
215 2hjr_A Malate dehydrogenase; m 96.8 0.0027 9.1E-08 66.6 8.6 111 230-341 15-155 (328)
216 1ldn_A L-lactate dehydrogenase 96.8 0.00095 3.3E-08 69.6 5.1 90 230-320 7-124 (316)
217 1t2d_A LDH-P, L-lactate dehydr 96.8 0.0029 9.9E-08 66.2 8.8 65 230-295 5-86 (322)
218 3evn_A Oxidoreductase, GFO/IDH 96.8 0.0023 7.9E-08 66.5 8.0 102 230-336 6-117 (329)
219 3e18_A Oxidoreductase; dehydro 96.8 0.0015 5.2E-08 69.0 6.5 64 230-293 6-75 (359)
220 1pg5_A Aspartate carbamoyltran 96.8 0.01 3.5E-07 61.5 12.5 94 226-319 146-260 (299)
221 2a9f_A Putative malic enzyme ( 96.8 0.0023 8E-08 68.5 7.9 96 223-323 182-293 (398)
222 4a7p_A UDP-glucose dehydrogena 96.8 0.003 1E-07 69.1 8.9 101 224-329 317-430 (446)
223 2d59_A Hypothetical protein PH 96.8 0.0022 7.4E-08 59.2 6.7 99 229-338 22-125 (144)
224 3ezy_A Dehydrogenase; structur 96.8 0.0016 5.3E-08 68.2 6.5 64 230-293 3-74 (344)
225 3q2o_A Phosphoribosylaminoimid 96.7 0.0016 5.4E-08 69.3 6.1 65 225-289 10-81 (389)
226 3r7f_A Aspartate carbamoyltran 96.7 0.0079 2.7E-07 62.4 11.0 92 226-319 144-250 (304)
227 3bio_A Oxidoreductase, GFO/IDH 96.7 0.0015 5.3E-08 67.5 5.7 99 230-336 10-116 (304)
228 3l4b_C TRKA K+ channel protien 96.7 0.002 6.7E-08 62.9 6.1 87 230-318 1-98 (218)
229 1vlv_A Otcase, ornithine carba 96.6 0.02 6.8E-07 59.9 13.8 127 172-319 131-285 (325)
230 3c1a_A Putative oxidoreductase 96.6 0.0013 4.3E-08 68.1 4.7 99 230-335 11-118 (315)
231 3e82_A Putative oxidoreductase 96.6 0.0044 1.5E-07 65.5 8.9 63 230-293 8-77 (364)
232 1dxh_A Ornithine carbamoyltran 96.6 0.016 5.4E-07 60.9 12.9 128 172-319 118-274 (335)
233 1f06_A MESO-diaminopimelate D- 96.6 0.0024 8.3E-08 66.5 6.6 101 230-337 4-110 (320)
234 3g17_A Similar to 2-dehydropan 96.6 0.00028 9.6E-09 72.5 -0.5 94 230-325 3-102 (294)
235 1pvv_A Otcase, ornithine carba 96.6 0.029 9.9E-07 58.5 14.4 127 172-319 119-271 (315)
236 1j5p_A Aspartate dehydrogenase 96.6 0.0023 7.7E-08 64.8 5.8 97 228-337 11-112 (253)
237 4fcc_A Glutamate dehydrogenase 96.6 0.0075 2.6E-07 65.6 10.2 108 224-338 230-367 (450)
238 3t4e_A Quinate/shikimate dehyd 96.5 0.0029 1E-07 66.0 6.7 71 224-294 143-231 (312)
239 3l9w_A Glutathione-regulated p 96.5 0.0022 7.5E-08 69.4 5.9 90 229-320 4-103 (413)
240 3ohs_X Trans-1,2-dihydrobenzen 96.5 0.0044 1.5E-07 64.5 7.8 64 230-293 3-76 (334)
241 2fgc_A Acetolactate synthase, 96.5 0.0031 1.1E-07 61.1 6.0 70 558-627 29-100 (193)
242 4amu_A Ornithine carbamoyltran 96.5 0.019 6.6E-07 60.8 12.7 128 171-319 143-300 (365)
243 1duv_G Octase-1, ornithine tra 96.5 0.016 5.4E-07 60.8 11.9 129 172-319 117-274 (333)
244 3gg2_A Sugar dehydrogenase, UD 96.5 0.0064 2.2E-07 66.5 9.2 94 224-321 313-420 (450)
245 1ydw_A AX110P-like protein; st 96.5 0.009 3.1E-07 62.8 10.0 104 230-338 7-123 (362)
246 3mz0_A Inositol 2-dehydrogenas 96.4 0.0035 1.2E-07 65.5 6.6 63 230-292 3-75 (344)
247 1jw9_B Molybdopterin biosynthe 96.4 0.0012 4E-08 66.5 2.8 105 208-318 12-152 (249)
248 3dfz_A SIRC, precorrin-2 dehyd 96.4 0.0053 1.8E-07 61.0 7.5 90 224-319 26-121 (223)
249 2aef_A Calcium-gated potassium 96.4 0.0031 1.1E-07 62.1 5.8 86 229-318 9-104 (234)
250 4f2g_A Otcase 1, ornithine car 96.4 0.028 9.7E-07 58.3 13.1 127 172-319 118-264 (309)
251 4ep1_A Otcase, ornithine carba 96.4 0.038 1.3E-06 58.1 14.1 128 171-319 142-294 (340)
252 1oth_A Protein (ornithine tran 96.4 0.035 1.2E-06 58.0 13.7 127 172-319 119-271 (321)
253 3ec7_A Putative dehydrogenase; 96.4 0.0047 1.6E-07 65.1 7.2 64 229-292 23-96 (357)
254 2p2s_A Putative oxidoreductase 96.4 0.011 3.8E-07 61.4 10.0 101 230-335 5-115 (336)
255 1y6j_A L-lactate dehydrogenase 96.3 0.0056 1.9E-07 63.8 7.3 112 229-341 7-147 (318)
256 4a8t_A Putrescine carbamoyltra 96.3 0.057 1.9E-06 56.8 14.9 130 171-319 135-292 (339)
257 3zwc_A Peroxisomal bifunctiona 96.3 0.017 5.8E-07 67.0 11.9 130 230-369 317-470 (742)
258 2dvm_A Malic enzyme, 439AA lon 96.3 0.0063 2.1E-07 66.3 7.6 109 224-337 181-312 (439)
259 3fef_A Putative glucosidase LP 96.3 0.0078 2.7E-07 65.8 8.3 112 228-340 4-167 (450)
260 1h6d_A Precursor form of gluco 96.3 0.0046 1.6E-07 67.1 6.5 64 230-293 84-160 (433)
261 3grf_A Ornithine carbamoyltran 96.3 0.045 1.5E-06 57.3 13.7 134 172-319 118-283 (328)
262 3qy9_A DHPR, dihydrodipicolina 96.2 0.0074 2.5E-07 60.6 7.3 80 230-321 4-85 (243)
263 1yqd_A Sinapyl alcohol dehydro 96.2 0.0056 1.9E-07 64.6 6.7 88 228-320 187-283 (366)
264 1ml4_A Aspartate transcarbamoy 96.2 0.017 5.8E-07 60.0 10.2 94 226-319 152-268 (308)
265 3p7m_A Malate dehydrogenase; p 96.2 0.019 6.3E-07 60.0 10.4 112 228-342 4-147 (321)
266 1ur5_A Malate dehydrogenase; o 96.2 0.0051 1.7E-07 63.8 6.1 89 230-320 3-120 (309)
267 1lld_A L-lactate dehydrogenase 96.2 0.012 4.1E-07 60.6 8.9 112 229-341 7-148 (319)
268 3tpf_A Otcase, ornithine carba 96.2 0.089 3E-06 54.6 15.3 127 172-319 109-262 (307)
269 2q3e_A UDP-glucose 6-dehydroge 96.2 0.016 5.6E-07 63.4 10.3 93 226-321 326-444 (467)
270 3pqe_A L-LDH, L-lactate dehydr 96.2 0.0077 2.6E-07 63.1 7.3 91 229-320 5-123 (326)
271 2axq_A Saccharopine dehydrogen 96.1 0.0056 1.9E-07 67.3 6.4 93 222-319 16-119 (467)
272 4a8p_A Putrescine carbamoyltra 96.1 0.071 2.4E-06 56.3 14.3 129 172-319 114-270 (355)
273 2w37_A Ornithine carbamoyltran 96.1 0.043 1.5E-06 58.0 12.7 127 172-319 140-295 (359)
274 3m2t_A Probable dehydrogenase; 96.0 0.006 2.1E-07 64.3 5.9 63 230-292 6-77 (359)
275 3nep_X Malate dehydrogenase; h 96.0 0.011 3.8E-07 61.6 7.7 95 230-327 1-124 (314)
276 4had_A Probable oxidoreductase 96.0 0.0073 2.5E-07 63.0 6.4 62 231-292 25-95 (350)
277 1ez4_A Lactate dehydrogenase; 96.0 0.0063 2.2E-07 63.5 5.7 111 230-341 6-145 (318)
278 3aog_A Glutamate dehydrogenase 96.0 0.085 2.9E-06 57.3 14.5 107 224-338 230-357 (440)
279 3csu_A Protein (aspartate carb 95.9 0.032 1.1E-06 58.0 10.7 94 226-319 151-267 (310)
280 1npy_A Hypothetical shikimate 95.9 0.024 8.1E-07 57.8 9.6 66 228-295 118-187 (271)
281 2zqz_A L-LDH, L-lactate dehydr 95.9 0.0077 2.6E-07 63.0 6.1 112 229-341 9-149 (326)
282 3ojo_A CAP5O; rossmann fold, c 95.9 0.019 6.5E-07 62.4 9.2 84 226-318 312-406 (431)
283 3tl2_A Malate dehydrogenase; c 95.9 0.016 5.4E-07 60.5 8.3 93 228-320 7-128 (315)
284 2i6t_A Ubiquitin-conjugating e 95.9 0.0074 2.5E-07 62.6 5.7 111 230-341 15-149 (303)
285 1ff9_A Saccharopine reductase; 95.9 0.011 3.7E-07 64.6 7.3 67 228-294 2-79 (450)
286 3gd5_A Otcase, ornithine carba 95.9 0.1 3.5E-06 54.4 14.2 127 172-319 121-273 (323)
287 3gvi_A Malate dehydrogenase; N 95.9 0.017 6E-07 60.4 8.4 92 227-320 5-125 (324)
288 3d0o_A L-LDH 1, L-lactate dehy 95.9 0.0085 2.9E-07 62.4 6.0 113 228-341 5-147 (317)
289 3i23_A Oxidoreductase, GFO/IDH 95.9 0.01 3.6E-07 62.1 6.7 63 230-292 3-74 (349)
290 3kux_A Putative oxidoreductase 95.9 0.0075 2.6E-07 63.3 5.6 65 230-294 8-78 (352)
291 1b7g_O Protein (glyceraldehyde 95.8 0.015 5E-07 61.3 7.8 84 231-319 3-108 (340)
292 3orq_A N5-carboxyaminoimidazol 95.8 0.0099 3.4E-07 63.1 6.4 64 226-289 9-79 (377)
293 4fb5_A Probable oxidoreductase 95.8 0.011 3.8E-07 62.1 6.7 63 230-292 26-103 (393)
294 3sds_A Ornithine carbamoyltran 95.8 0.098 3.3E-06 55.3 13.7 138 171-319 138-308 (353)
295 3g79_A NDP-N-acetyl-D-galactos 95.8 0.014 4.7E-07 64.3 7.5 97 224-328 348-457 (478)
296 2nu8_A Succinyl-COA ligase [AD 95.8 0.014 4.7E-07 60.1 7.0 104 229-338 7-116 (288)
297 4fgw_A Glycerol-3-phosphate de 95.8 0.0089 3E-07 64.2 5.7 89 231-321 36-153 (391)
298 3lk7_A UDP-N-acetylmuramoylala 95.7 0.0063 2.1E-07 66.3 4.5 111 226-336 6-137 (451)
299 3two_A Mannitol dehydrogenase; 95.7 0.017 5.7E-07 60.3 7.6 88 228-320 176-266 (348)
300 2vt3_A REX, redox-sensing tran 95.7 0.0065 2.2E-07 60.0 4.0 64 230-293 86-155 (215)
301 3vku_A L-LDH, L-lactate dehydr 95.7 0.013 4.4E-07 61.4 6.5 98 227-326 7-130 (326)
302 3d6n_B Aspartate carbamoyltran 95.7 0.067 2.3E-06 55.1 11.6 67 226-294 143-215 (291)
303 3k92_A NAD-GDH, NAD-specific g 95.7 0.12 4.2E-06 55.8 14.1 107 224-338 216-342 (424)
304 3f4l_A Putative oxidoreductase 95.7 0.013 4.4E-07 61.3 6.4 64 230-293 3-75 (345)
305 2y0c_A BCEC, UDP-glucose dehyd 95.6 0.031 1.1E-06 61.5 9.3 100 224-328 323-446 (478)
306 3ew7_A LMO0794 protein; Q8Y8U8 95.6 0.031 1.1E-06 53.3 8.3 93 230-322 1-105 (221)
307 1xyg_A Putative N-acetyl-gamma 95.5 0.027 9.2E-07 59.7 8.5 85 229-320 16-113 (359)
308 2cdc_A Glucose dehydrogenase g 95.5 0.0074 2.5E-07 63.6 4.0 91 226-320 178-279 (366)
309 1piw_A Hypothetical zinc-type 95.5 0.021 7.1E-07 60.0 7.4 89 228-320 179-277 (360)
310 4gqa_A NAD binding oxidoreduct 95.5 0.011 3.7E-07 63.4 5.2 62 231-292 28-105 (412)
311 3gdo_A Uncharacterized oxidore 95.5 0.014 4.8E-07 61.4 5.9 64 230-294 6-76 (358)
312 3tum_A Shikimate dehydrogenase 95.5 0.029 9.9E-07 57.2 8.1 96 224-319 120-225 (269)
313 2nvw_A Galactose/lactose metab 95.5 0.021 7.2E-07 62.8 7.5 102 230-336 40-164 (479)
314 3moi_A Probable dehydrogenase; 95.5 0.011 3.8E-07 62.8 5.2 63 230-292 3-73 (387)
315 2tmg_A Protein (glutamate dehy 95.4 0.25 8.5E-06 53.3 15.5 108 224-338 204-333 (415)
316 3o9z_A Lipopolysaccaride biosy 95.4 0.026 9E-07 58.3 7.7 63 230-292 4-81 (312)
317 1obb_A Maltase, alpha-glucosid 95.4 0.019 6.5E-07 63.2 6.9 113 229-342 3-174 (480)
318 3e8x_A Putative NAD-dependent 95.4 0.024 8.1E-07 55.3 6.9 71 224-294 16-95 (236)
319 3abi_A Putative uncharacterize 95.4 0.015 5.1E-07 61.4 5.8 68 226-294 13-88 (365)
320 2o3j_A UDP-glucose 6-dehydroge 95.4 0.05 1.7E-06 59.8 10.2 101 226-330 332-456 (481)
321 1js1_X Transcarbamylase; alpha 95.3 0.15 5.3E-06 53.1 13.1 126 171-319 130-275 (324)
322 3oa2_A WBPB; oxidoreductase, s 95.3 0.028 9.6E-07 58.3 7.5 63 230-292 4-82 (318)
323 4h31_A Otcase, ornithine carba 95.3 0.26 8.7E-06 52.2 14.9 130 171-319 142-300 (358)
324 1zq6_A Otcase, ornithine carba 95.3 0.27 9.3E-06 52.0 15.0 128 170-319 151-315 (359)
325 3btv_A Galactose/lactose metab 95.3 0.017 5.9E-07 62.6 6.1 102 230-336 21-145 (438)
326 2yfq_A Padgh, NAD-GDH, NAD-spe 95.3 0.047 1.6E-06 59.1 9.2 95 224-324 207-327 (421)
327 3fhl_A Putative oxidoreductase 95.2 0.013 4.3E-07 61.8 4.6 62 230-292 6-74 (362)
328 3eag_A UDP-N-acetylmuramate:L- 95.2 0.029 1E-06 58.3 7.3 107 229-335 4-132 (326)
329 1zud_1 Adenylyltransferase THI 95.2 0.014 4.8E-07 58.7 4.7 104 209-318 10-149 (251)
330 1oju_A MDH, malate dehydrogena 95.2 0.03 1E-06 57.7 7.2 111 230-344 1-147 (294)
331 1cf2_P Protein (glyceraldehyde 95.2 0.011 3.7E-07 62.2 3.9 64 231-294 3-89 (337)
332 3dty_A Oxidoreductase, GFO/IDH 95.2 0.017 5.8E-07 61.7 5.5 63 230-292 13-94 (398)
333 2ozp_A N-acetyl-gamma-glutamyl 95.2 0.03 1E-06 59.0 7.3 85 230-320 5-100 (345)
334 3lou_A Formyltetrahydrofolate 95.2 0.022 7.4E-07 58.8 6.0 53 557-609 9-61 (292)
335 1ys4_A Aspartate-semialdehyde 95.2 0.018 6.1E-07 60.8 5.5 85 230-319 9-114 (354)
336 3obi_A Formyltetrahydrofolate 95.1 0.012 4.2E-07 60.5 4.0 52 557-608 5-56 (288)
337 1oi7_A Succinyl-COA synthetase 95.1 0.031 1E-06 57.5 7.0 103 229-338 7-116 (288)
338 1cdo_A Alcohol dehydrogenase; 95.1 0.062 2.1E-06 56.6 9.6 87 228-319 192-294 (374)
339 2czc_A Glyceraldehyde-3-phosph 95.1 0.027 9.4E-07 58.9 6.8 64 231-294 4-90 (334)
340 1mld_A Malate dehydrogenase; o 95.1 0.063 2.2E-06 55.7 9.4 97 230-328 1-124 (314)
341 1hdo_A Biliverdin IX beta redu 95.1 0.033 1.1E-06 52.4 6.6 66 229-294 3-78 (206)
342 3v5n_A Oxidoreductase; structu 95.0 0.03 1E-06 60.3 6.9 65 230-294 38-121 (417)
343 1rjw_A ADH-HT, alcohol dehydro 95.0 0.025 8.7E-07 58.8 6.2 88 228-320 164-262 (339)
344 2jhf_A Alcohol dehydrogenase E 95.0 0.065 2.2E-06 56.4 9.4 87 228-319 191-293 (374)
345 1zh8_A Oxidoreductase; TM0312, 95.0 0.025 8.6E-07 59.0 6.0 63 230-292 19-91 (340)
346 3ldh_A Lactate dehydrogenase; 95.0 0.0083 2.8E-07 63.0 2.2 92 228-320 20-139 (330)
347 1v9l_A Glutamate dehydrogenase 95.0 0.099 3.4E-06 56.5 10.6 107 224-338 205-338 (421)
348 2xxj_A L-LDH, L-lactate dehydr 94.9 0.02 7E-07 59.4 5.1 111 230-341 1-140 (310)
349 4ew6_A D-galactose-1-dehydroge 94.9 0.03 1E-06 58.3 6.3 59 229-292 25-90 (330)
350 4e4t_A Phosphoribosylaminoimid 94.9 0.033 1.1E-06 60.1 6.8 64 226-289 32-102 (419)
351 3u3x_A Oxidoreductase; structu 94.9 0.035 1.2E-06 58.5 6.9 64 229-292 26-97 (361)
352 2dt5_A AT-rich DNA-binding pro 94.9 0.012 4.2E-07 57.8 3.1 63 230-293 81-150 (211)
353 2d8a_A PH0655, probable L-thre 94.9 0.021 7.2E-07 59.6 5.1 45 228-272 167-213 (348)
354 2ixa_A Alpha-N-acetylgalactosa 94.9 0.039 1.3E-06 59.9 7.3 63 230-292 21-100 (444)
355 1p0f_A NADP-dependent alcohol 94.9 0.064 2.2E-06 56.4 8.8 87 228-319 191-293 (373)
356 1uuf_A YAHK, zinc-type alcohol 94.9 0.029 9.9E-07 59.3 6.1 88 228-320 194-289 (369)
357 1pjq_A CYSG, siroheme synthase 94.9 0.023 8E-07 62.1 5.5 67 224-290 7-79 (457)
358 1e3i_A Alcohol dehydrogenase, 94.9 0.08 2.7E-06 55.7 9.5 87 228-319 195-297 (376)
359 3ip1_A Alcohol dehydrogenase, 94.8 0.049 1.7E-06 58.2 7.9 88 228-319 213-318 (404)
360 2bma_A Glutamate dehydrogenase 94.8 0.13 4.4E-06 56.2 11.2 34 224-257 247-280 (470)
361 2nqt_A N-acetyl-gamma-glutamyl 94.8 0.033 1.1E-06 59.0 6.4 95 230-331 10-122 (352)
362 2d4a_B Malate dehydrogenase; a 94.8 0.05 1.7E-06 56.3 7.6 92 231-326 1-121 (308)
363 3dhn_A NAD-dependent epimerase 94.8 0.027 9.2E-07 54.3 5.3 65 230-294 5-78 (227)
364 3aoe_E Glutamate dehydrogenase 94.8 0.26 8.7E-06 53.3 13.3 107 224-338 213-336 (419)
365 2fzw_A Alcohol dehydrogenase c 94.8 0.067 2.3E-06 56.2 8.7 87 228-319 190-292 (373)
366 2yfk_A Aspartate/ornithine car 94.8 0.097 3.3E-06 56.5 10.0 64 227-290 186-270 (418)
367 3n0v_A Formyltetrahydrofolate 94.8 0.042 1.4E-06 56.5 6.9 53 557-609 7-59 (286)
368 3rui_A Ubiquitin-like modifier 94.8 0.067 2.3E-06 56.3 8.4 37 225-261 30-67 (340)
369 2we8_A Xanthine dehydrogenase; 94.7 0.1 3.5E-06 55.9 10.0 87 229-336 204-296 (386)
370 1pl8_A Human sorbitol dehydrog 94.7 0.071 2.4E-06 55.8 8.6 88 228-320 171-274 (356)
371 4h3v_A Oxidoreductase domain p 94.7 0.019 6.6E-07 60.1 4.2 63 230-292 7-84 (390)
372 4ekn_B Aspartate carbamoyltran 94.7 0.23 8E-06 51.4 12.2 65 226-290 148-225 (306)
373 3h9e_O Glyceraldehyde-3-phosph 94.7 0.035 1.2E-06 58.4 6.0 36 230-265 8-44 (346)
374 1bgv_A Glutamate dehydrogenase 94.7 0.064 2.2E-06 58.4 8.3 34 224-257 225-258 (449)
375 1lc0_A Biliverdin reductase A; 94.7 0.021 7.3E-07 58.4 4.3 60 230-292 8-74 (294)
376 1pqw_A Polyketide synthase; ro 94.6 0.019 6.6E-07 54.5 3.7 35 228-262 38-73 (198)
377 3r6d_A NAD-dependent epimerase 94.6 0.02 6.9E-07 55.2 3.9 64 230-293 6-83 (221)
378 3o1l_A Formyltetrahydrofolate 94.6 0.019 6.5E-07 59.5 3.9 55 554-608 17-72 (302)
379 4gmf_A Yersiniabactin biosynth 94.6 0.023 7.7E-07 60.6 4.5 63 230-293 8-76 (372)
380 3s2e_A Zinc-containing alcohol 94.6 0.032 1.1E-06 57.9 5.5 87 228-319 166-263 (340)
381 4aj2_A L-lactate dehydrogenase 94.5 0.046 1.6E-06 57.3 6.6 94 226-320 16-137 (331)
382 4ej6_A Putative zinc-binding d 94.5 0.04 1.4E-06 58.2 6.1 87 228-319 182-284 (370)
383 3do5_A HOM, homoserine dehydro 94.5 0.12 4E-06 54.1 9.6 107 231-338 4-135 (327)
384 3r3j_A Glutamate dehydrogenase 94.5 0.13 4.6E-06 55.9 10.2 36 224-259 234-270 (456)
385 1kyq_A Met8P, siroheme biosynt 94.4 0.013 4.5E-07 59.9 2.1 40 224-263 8-47 (274)
386 1u8f_O GAPDH, glyceraldehyde-3 94.4 0.051 1.7E-06 57.0 6.6 87 230-321 4-124 (335)
387 3h2s_A Putative NADH-flavin re 94.4 0.067 2.3E-06 51.2 7.0 64 230-293 1-72 (224)
388 2cf5_A Atccad5, CAD, cinnamyl 94.4 0.037 1.3E-06 58.0 5.6 88 228-320 180-276 (357)
389 3qvo_A NMRA family protein; st 94.4 0.027 9.2E-07 55.1 4.2 67 227-293 21-98 (236)
390 3q98_A Transcarbamylase; rossm 94.4 0.49 1.7E-05 50.7 14.2 66 226-291 188-274 (399)
391 1smk_A Malate dehydrogenase, g 94.4 0.069 2.4E-06 55.7 7.5 94 230-326 9-130 (326)
392 2nyi_A Unknown protein; protei 94.4 0.031 1.1E-06 53.9 4.5 51 558-608 93-147 (195)
393 3nrb_A Formyltetrahydrofolate 94.3 0.042 1.5E-06 56.5 5.7 51 559-609 8-58 (287)
394 1o6z_A MDH, malate dehydrogena 94.3 0.062 2.1E-06 55.4 7.0 111 230-341 1-143 (303)
395 1u8s_A Glycine cleavage system 94.3 0.038 1.3E-06 52.9 5.0 48 559-608 7-54 (192)
396 1e3j_A NADP(H)-dependent ketos 94.3 0.087 3E-06 54.9 8.1 87 228-319 168-271 (352)
397 1lu9_A Methylene tetrahydromet 94.3 0.065 2.2E-06 54.5 6.9 38 225-262 115-153 (287)
398 3vtf_A UDP-glucose 6-dehydroge 94.3 0.043 1.5E-06 59.8 5.8 85 225-318 329-426 (444)
399 2fp4_A Succinyl-COA ligase [GD 94.3 0.043 1.5E-06 56.9 5.5 106 226-338 10-124 (305)
400 3cps_A Glyceraldehyde 3-phosph 94.2 0.071 2.4E-06 56.4 7.2 86 230-320 18-139 (354)
401 3uog_A Alcohol dehydrogenase; 94.2 0.049 1.7E-06 57.2 6.0 45 228-272 189-234 (363)
402 1u8x_X Maltose-6'-phosphate gl 94.2 0.064 2.2E-06 58.9 7.1 114 229-342 28-194 (472)
403 3e5r_O PP38, glyceraldehyde-3- 94.2 0.053 1.8E-06 57.0 6.2 85 231-320 5-127 (337)
404 3tqh_A Quinone oxidoreductase; 94.2 0.026 8.9E-07 58.2 3.8 87 228-320 152-246 (321)
405 1iz0_A Quinone oxidoreductase; 94.1 0.043 1.5E-06 55.9 5.2 85 228-319 125-218 (302)
406 3uko_A Alcohol dehydrogenase c 94.1 0.091 3.1E-06 55.4 7.9 87 228-319 193-295 (378)
407 4eye_A Probable oxidoreductase 94.1 0.052 1.8E-06 56.5 5.9 86 228-319 159-257 (342)
408 3keo_A Redox-sensing transcrip 94.1 0.023 7.9E-07 55.9 2.9 64 230-293 85-158 (212)
409 1lnq_A MTHK channels, potassiu 94.1 0.041 1.4E-06 57.1 5.0 86 229-317 115-209 (336)
410 3fi9_A Malate dehydrogenase; s 94.1 0.033 1.1E-06 58.7 4.2 66 227-292 6-85 (343)
411 1nvm_B Acetaldehyde dehydrogen 93.9 0.06 2.1E-06 55.9 5.9 63 230-292 5-80 (312)
412 3fpc_A NADP-dependent alcohol 93.9 0.052 1.8E-06 56.6 5.5 87 228-319 166-266 (352)
413 2vn8_A Reticulon-4-interacting 93.8 0.13 4.6E-06 54.0 8.5 91 228-322 183-283 (375)
414 2hcy_A Alcohol dehydrogenase 1 93.8 0.073 2.5E-06 55.4 6.2 88 228-320 169-270 (347)
415 4dup_A Quinone oxidoreductase; 93.7 0.047 1.6E-06 57.1 4.7 86 228-319 167-265 (353)
416 3ius_A Uncharacterized conserv 93.7 0.064 2.2E-06 53.5 5.5 64 229-294 5-74 (286)
417 1f8f_A Benzyl alcohol dehydrog 93.7 0.049 1.7E-06 57.3 4.8 45 228-272 190-236 (371)
418 3fbg_A Putative arginate lyase 93.6 0.066 2.3E-06 55.8 5.6 45 228-272 150-196 (346)
419 2rir_A Dipicolinate synthase, 93.6 0.085 2.9E-06 54.0 6.3 105 227-338 5-120 (300)
420 3oqb_A Oxidoreductase; structu 93.6 0.16 5.5E-06 53.5 8.6 101 230-336 7-133 (383)
421 2h6e_A ADH-4, D-arabinose 1-de 93.5 0.065 2.2E-06 55.7 5.4 46 228-273 170-218 (344)
422 3mw9_A GDH 1, glutamate dehydr 93.5 0.22 7.5E-06 54.7 9.6 104 226-338 241-365 (501)
423 4gsl_A Ubiquitin-like modifier 93.5 0.12 4.2E-06 58.2 7.8 74 175-261 283-359 (615)
424 1xgk_A Nitrogen metabolite rep 93.5 0.089 3E-06 55.0 6.3 95 228-322 4-115 (352)
425 2yyy_A Glyceraldehyde-3-phosph 93.4 0.13 4.4E-06 54.1 7.3 28 231-258 4-32 (343)
426 3kzn_A Aotcase, N-acetylornith 93.3 1.1 3.8E-05 47.3 14.5 102 170-291 151-273 (359)
427 3vh1_A Ubiquitin-like modifier 93.3 0.14 4.7E-06 57.7 7.8 91 225-319 323-464 (598)
428 2c0c_A Zinc binding alcohol de 93.3 0.05 1.7E-06 57.2 4.1 45 228-272 163-209 (362)
429 2ejw_A HDH, homoserine dehydro 93.3 0.032 1.1E-06 58.6 2.5 99 231-336 5-116 (332)
430 3goh_A Alcohol dehydrogenase, 93.3 0.06 2.1E-06 55.2 4.6 86 228-319 142-229 (315)
431 3dqp_A Oxidoreductase YLBE; al 93.3 0.098 3.4E-06 50.2 5.8 65 230-295 1-75 (219)
432 1v3u_A Leukotriene B4 12- hydr 93.3 0.074 2.5E-06 54.9 5.2 35 228-262 145-180 (333)
433 3ip3_A Oxidoreductase, putativ 93.3 0.078 2.7E-06 55.1 5.4 62 230-292 3-76 (337)
434 3gms_A Putative NADPH:quinone 93.2 0.069 2.4E-06 55.4 5.0 45 228-272 144-190 (340)
435 4b7c_A Probable oxidoreductase 93.2 0.044 1.5E-06 56.7 3.5 45 228-272 149-196 (336)
436 4hv4_A UDP-N-acetylmuramate--L 93.2 0.092 3.2E-06 57.8 6.2 108 229-336 22-147 (494)
437 3qwb_A Probable quinone oxidor 93.2 0.069 2.4E-06 55.2 4.8 45 228-272 148-194 (334)
438 1mv8_A GMD, GDP-mannose 6-dehy 93.1 0.13 4.4E-06 55.6 7.1 85 228-318 312-419 (436)
439 1hdg_O Holo-D-glyceraldehyde-3 93.1 0.073 2.5E-06 55.8 4.9 30 230-259 1-33 (332)
440 3on5_A BH1974 protein; structu 93.1 0.16 5.5E-06 53.8 7.5 132 230-395 200-344 (362)
441 1vkn_A N-acetyl-gamma-glutamyl 93.1 0.18 6.1E-06 53.3 7.8 85 230-321 14-109 (351)
442 3i6i_A Putative leucoanthocyan 93.1 0.2 6.9E-06 51.6 8.2 66 227-292 8-92 (346)
443 2gas_A Isoflavone reductase; N 93.1 0.2 6.8E-06 50.3 8.0 65 229-293 2-86 (307)
444 4f3y_A DHPR, dihydrodipicolina 93.0 0.13 4.3E-06 52.5 6.4 87 230-321 8-106 (272)
445 1u8s_A Glycine cleavage system 93.0 0.17 5.9E-06 48.2 7.1 50 558-607 93-148 (192)
446 3oig_A Enoyl-[acyl-carrier-pro 92.9 0.39 1.3E-05 47.5 9.8 38 225-262 3-43 (266)
447 3jv7_A ADH-A; dehydrogenase, n 92.9 0.17 5.7E-06 52.5 7.3 88 228-320 171-271 (345)
448 1kol_A Formaldehyde dehydrogen 92.9 0.11 3.6E-06 55.2 5.9 46 228-273 185-232 (398)
449 3jyn_A Quinone oxidoreductase; 92.8 0.076 2.6E-06 54.7 4.5 45 228-272 140-186 (325)
450 2ep5_A 350AA long hypothetical 92.8 0.079 2.7E-06 55.8 4.7 84 230-319 5-108 (350)
451 1xq6_A Unknown protein; struct 92.8 0.14 4.7E-06 49.6 6.1 68 227-294 2-80 (253)
452 3upl_A Oxidoreductase; rossman 92.8 0.15 5E-06 55.6 6.8 101 230-335 24-156 (446)
453 4ina_A Saccharopine dehydrogen 92.8 0.065 2.2E-06 57.5 4.0 86 230-320 2-108 (405)
454 4id9_A Short-chain dehydrogena 92.8 0.12 4.2E-06 53.0 6.0 66 224-294 14-88 (347)
455 3gpi_A NAD-dependent epimerase 92.7 0.066 2.2E-06 53.6 3.8 62 228-292 2-72 (286)
456 2x5o_A UDP-N-acetylmuramoylala 92.7 0.085 2.9E-06 57.1 4.9 109 226-335 2-128 (439)
457 2dq4_A L-threonine 3-dehydroge 92.6 0.075 2.6E-06 55.2 4.2 35 228-262 164-199 (343)
458 3hn7_A UDP-N-acetylmuramate-L- 92.5 0.16 5.5E-06 56.3 6.9 110 227-336 17-147 (524)
459 1s6y_A 6-phospho-beta-glucosid 92.5 0.22 7.5E-06 54.3 7.8 113 230-342 8-175 (450)
460 2yv1_A Succinyl-COA ligase [AD 92.5 0.086 2.9E-06 54.3 4.3 102 230-338 14-122 (294)
461 3ijp_A DHPR, dihydrodipicolina 92.5 0.2 6.9E-06 51.4 7.0 87 230-321 22-121 (288)
462 2bka_A CC3, TAT-interacting pr 92.4 0.12 4.1E-06 50.1 5.2 68 227-294 16-95 (242)
463 3gqv_A Enoyl reductase; medium 92.4 0.31 1.1E-05 51.2 8.6 47 227-273 163-210 (371)
464 1vj0_A Alcohol dehydrogenase, 92.4 0.15 5E-06 53.9 6.1 45 228-272 195-241 (380)
465 1qyc_A Phenylcoumaran benzylic 92.3 0.19 6.3E-06 50.6 6.6 64 229-292 4-86 (308)
466 1qor_A Quinone oxidoreductase; 92.3 0.098 3.3E-06 53.8 4.5 35 228-262 140-175 (327)
467 3pi7_A NADH oxidoreductase; gr 92.3 0.22 7.6E-06 51.7 7.3 84 230-319 166-263 (349)
468 3k5i_A Phosphoribosyl-aminoimi 92.3 0.17 5.7E-06 54.1 6.4 67 222-289 17-92 (403)
469 2nyi_A Unknown protein; protei 92.2 0.21 7.1E-06 48.1 6.4 47 559-607 6-52 (195)
470 2j3h_A NADP-dependent oxidored 92.2 0.069 2.3E-06 55.4 3.2 35 228-262 155-190 (345)
471 3hhp_A Malate dehydrogenase; M 92.2 0.29 9.9E-06 50.8 7.9 99 230-330 1-127 (312)
472 3dr3_A N-acetyl-gamma-glutamyl 92.2 0.083 2.8E-06 55.5 3.8 86 230-321 5-108 (337)
473 2b5w_A Glucose dehydrogenase; 92.2 0.13 4.3E-06 53.8 5.2 46 228-273 172-224 (357)
474 3pid_A UDP-glucose 6-dehydroge 92.1 0.13 4.3E-06 56.0 5.3 63 228-292 331-404 (432)
475 3nv9_A Malic enzyme; rossmann 92.1 1.1 3.6E-05 48.9 12.4 177 176-389 187-395 (487)
476 3ff4_A Uncharacterized protein 92.0 0.12 4.1E-06 46.3 4.2 97 230-338 5-106 (122)
477 2wm3_A NMRA-like family domain 92.0 0.22 7.6E-06 50.0 6.7 64 229-292 5-81 (299)
478 2eih_A Alcohol dehydrogenase; 91.9 0.17 5.7E-06 52.5 5.8 35 228-262 166-201 (343)
479 2f06_A Conserved hypothetical 91.9 0.15 5.1E-06 46.3 4.7 59 559-621 7-65 (144)
480 3c8m_A Homoserine dehydrogenas 91.8 0.16 5.6E-06 53.0 5.6 106 230-336 7-139 (331)
481 2dph_A Formaldehyde dismutase; 91.8 0.1 3.5E-06 55.5 4.1 46 228-273 185-232 (398)
482 3ruf_A WBGU; rossmann fold, UD 91.8 0.21 7.3E-06 51.2 6.4 67 226-292 22-109 (351)
483 2zcu_A Uncharacterized oxidore 91.8 0.11 3.8E-06 51.5 4.1 62 231-292 1-74 (286)
484 3mtj_A Homoserine dehydrogenas 91.7 0.17 5.8E-06 55.1 5.7 62 231-292 12-87 (444)
485 3nkl_A UDP-D-quinovosamine 4-d 91.6 0.14 4.6E-06 45.9 4.1 66 229-294 4-76 (141)
486 2r6j_A Eugenol synthase 1; phe 91.6 0.21 7.3E-06 50.6 6.0 63 230-292 12-88 (318)
487 4g65_A TRK system potassium up 91.6 0.12 4E-06 56.6 4.3 64 229-292 3-77 (461)
488 1gad_O D-glyceraldehyde-3-phos 91.5 0.21 7.1E-06 52.3 6.0 31 231-261 3-34 (330)
489 4a0s_A Octenoyl-COA reductase/ 91.5 0.27 9.4E-06 52.9 7.1 87 228-320 220-337 (447)
490 2j8z_A Quinone oxidoreductase; 91.4 0.17 5.8E-06 52.9 5.2 35 228-262 162-197 (354)
491 1qyd_A Pinoresinol-lariciresin 91.4 0.49 1.7E-05 47.6 8.5 66 229-294 4-87 (313)
492 4dvj_A Putative zinc-dependent 91.3 0.32 1.1E-05 51.0 7.2 45 228-272 171-218 (363)
493 1wly_A CAAR, 2-haloacrylate re 91.3 0.17 5.7E-06 52.2 4.9 35 228-262 145-180 (333)
494 3orf_A Dihydropteridine reduct 91.3 0.18 6E-06 49.9 4.9 37 227-263 20-57 (251)
495 3cmc_O GAPDH, glyceraldehyde-3 91.3 0.18 6.1E-06 52.9 5.1 29 231-259 3-32 (334)
496 3h8v_A Ubiquitin-like modifier 91.2 0.17 5.6E-06 52.2 4.8 38 225-262 32-70 (292)
497 2r00_A Aspartate-semialdehyde 91.2 0.078 2.7E-06 55.6 2.3 86 230-320 4-97 (336)
498 1dlj_A UDP-glucose dehydrogena 91.1 0.25 8.7E-06 52.8 6.3 66 226-292 306-382 (402)
499 3ijr_A Oxidoreductase, short c 91.1 0.63 2.1E-05 47.1 8.9 38 225-262 43-81 (291)
500 1ebf_A Homoserine dehydrogenas 91.1 0.15 5.1E-06 54.0 4.3 30 231-260 6-40 (358)
No 1
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=1.1e-101 Score=867.87 Aligned_cols=520 Identities=35% Similarity=0.532 Sum_probs=492.1
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcc
Q 006864 88 TPKPTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNV 167 (628)
Q Consensus 88 ~~~~~vlv~~~l~~~~~~~l~~~~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~i 167 (628)
|.++|||+++++.++.++.|++..++++....+.+++.+.+++||++++++.+++++++++++ |+||||+++|+|||||
T Consensus 2 m~~~~vl~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~i 80 (529)
T 1ygy_A 2 VSLPVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVLAAA-PKLKIVARAGVGLDNV 80 (529)
T ss_dssp -CCCEEEECSSCCGGGGTTSCSSSEEEECCTTSHHHHHHHGGGCSEEEECSSSCBCHHHHHTC-TTCCEEEESSSCCTTB
T ss_pred CCCcEEEEeCCCCHHHHHHHhcCceEEEcCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCcEEEECCcCcCcc
Confidence 457899999999999888887766777766678899999999999999998889999999987 5999999999999999
Q ss_pred cHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHH
Q 006864 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARR 247 (628)
Q Consensus 168 Dl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~ 247 (628)
|+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.|.+++|||+||||+|+||+++|++
T Consensus 81 d~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~ 160 (529)
T 1ygy_A 81 DVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQR 160 (529)
T ss_dssp CHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987778999999999999999999999999
Q ss_pred HHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHH
Q 006864 248 AKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEE 327 (628)
Q Consensus 248 l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~ 327 (628)
|+++||+|++|||+...+.+.+.|+..+++++++++||+|++|+|++++|+++++++.+++||+|++|||++||+++|++
T Consensus 161 l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~ 240 (529)
T 1ygy_A 161 IAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEA 240 (529)
T ss_dssp HHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred HHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHH
Confidence 99999999999998866667778888789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccCCCCC
Q 006864 328 ALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAINAPMVP 407 (628)
Q Consensus 328 aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~vn~p~~~ 407 (628)
+|+++|++|+++||++|||+.||+ +++|||+++|||+|||++++|.|++++++..+++++.+++.|+.+.+.||.|.
T Consensus 241 aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~~~~v~~~~-- 317 (529)
T 1ygy_A 241 ALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVNVGG-- 317 (529)
T ss_dssp HHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCSCCS--
T ss_pred HHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--
Confidence 999999999999999999999997 68999999999999999999999999999999999999999999999999875
Q ss_pred cccccccccHHHHHHHHhHHHHHHhcCCCCceEEEEEEeecCCCCCCCcccchHHHHHhhccccccCcccccchHhHHhh
Q 006864 408 SEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLVNADFTAKQ 487 (628)
Q Consensus 408 ~~~~~~~~p~~~lAerlG~la~qL~~g~~~~~~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vnlvNA~~iAke 487 (628)
++.++++.||+.||+++|+++.||++| +|++++++|+|+++ + .+++++++++++|+|+.+.++.+|++||+.+|++
T Consensus 318 ~~~hd~i~P~l~La~~lg~~~~qla~g--~~~ditria~G~~~-~-~~i~~~n~a~l~g~L~~~~~~~~~~vnA~~iA~e 393 (529)
T 1ygy_A 318 GVVNEEVAPWLDLVRKLGVLAGVLSDE--LPVSLSVQVRGELA-A-EEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAE 393 (529)
T ss_dssp TTSCTTTTTHHHHHHHHHHHHHHTSSS--CCSEEEEEEEEGGG-G-SCCHHHHHHHHHHHTGGGSCTTCCCCCHHHHHHH
T ss_pred cccchhhhhHHHHHHHHHHHHHHHhCC--CceEEEEEEEeecc-c-cCCcHHHHHHHHHhcCCCCCCCccccCHHHHHHH
Confidence 889999999999999999999999998 89999999999998 6 6799999999999999999888999999999999
Q ss_pred cCceEEEEEeecCCCCCCCCceEEEEEEecccccceeeCCCcEEEEEEEEEC--CeeEEEEECceeEEeecCCcEEEEec
Q 006864 488 KGLRISEERVVADSSPEFPIDSIQVQLSNVDSKFAAAVSENGEISIEGKVKF--GIPHLTRVGSFGVDASLEGNLILCRQ 565 (628)
Q Consensus 488 ~GI~i~~~~~~~~~~~~~~~ntv~v~l~~~~~~~~~~~~~~~~~~v~Gt~~g--G~~~I~~Idgf~Vd~~~~~~~Llv~~ 565 (628)
+||++.|.+.+... .|+|+++++++ +.++++++|.|+|+| |.++|++||||++++.|++|+|++.|
T Consensus 394 ~Gi~i~~~~~~~~~---~~~n~v~v~~~---------~~~~~~~~v~Gt~~gg~g~~~i~~i~g~~v~~~~~~~~l~v~~ 461 (529)
T 1ygy_A 394 RGVTAEICKASESP---NHRSVVDVRAV---------GADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHY 461 (529)
T ss_dssp HSCEEEEEEESCCS---SSSEEEEEEEE---------CTTSCEEEEEEEEETTTTEEEEEEETTEEEEEESCSEEEEEEE
T ss_pred cCCEEEEEEccCCC---CCCCEEEEEEE---------ECCCCEEEEEEEEeCCCCcEEEEEECCEEEEecCCccEEEEEc
Confidence 99999998866443 79999999997 347889999999997 49999999999999999999999999
Q ss_pred cCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCCCCHHHHHHHhcccCcccc
Q 006864 566 VDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEEPNQDSLKEIGKVHFVARI 627 (628)
Q Consensus 566 ~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~~~~~~l~~L~~l~~v~~v 627 (628)
.|+||+|++|+++|++++|||++|+++|..+++.|+|+|++|++++++++++|+++++|.++
T Consensus 462 ~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~~~~~l~~l~~~~~i~~v 523 (529)
T 1ygy_A 462 VDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVDAYKL 523 (529)
T ss_dssp SCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHHHHHHHHHHTEEEE
T ss_pred CCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCCCHHHHHHHhcCCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 2
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=1.6e-79 Score=666.02 Aligned_cols=389 Identities=31% Similarity=0.440 Sum_probs=345.7
Q ss_pred CCCeEEEeCCCCHhHHHHhhcCC--cEEEec-CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccC
Q 006864 89 PKPTILVSEKLGEAGLAILRSFG--NVECLY-DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGID 165 (628)
Q Consensus 89 ~~~~vlv~~~l~~~~~~~l~~~~--~v~~~~-~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D 165 (628)
.|+|||+++++++.+++.|++.+ ++++.. .++++++.+.++++|++++++.+++++++++++ |+||+|+++|+|+|
T Consensus 3 ~~~kil~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d 81 (404)
T 1sc6_A 3 DKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAA-EKLVAIGAFAIGTN 81 (404)
T ss_dssp SSCCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHC-SSCCEEEECSSCCT
T ss_pred CceEEEEeCCCCHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCcEEEECCcccC
Confidence 46789999999999999998763 676643 568899999999999999999889999999998 59999999999999
Q ss_pred cccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHH
Q 006864 166 NVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVA 245 (628)
Q Consensus 166 ~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA 245 (628)
|||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.|.+++|||+||||+|+||+.+|
T Consensus 82 ~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA 161 (404)
T 1sc6_A 82 QVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLG 161 (404)
T ss_dssp TBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHH
T ss_pred ccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998766778999999999999999999999
Q ss_pred HHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006864 246 RRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (628)
Q Consensus 246 ~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~v 324 (628)
++|++|||+|++|||+.... ..++..+ ++++++++||+|++|+|++++|+++|+++.|++||+|++|||++||+++
T Consensus 162 ~~l~~~G~~V~~~d~~~~~~---~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~v 238 (404)
T 1sc6_A 162 ILAESLGMYVYFYDIENKLP---LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVV 238 (404)
T ss_dssp HHHHHTTCEEEEECSSCCCC---CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSB
T ss_pred HHHHHCCCEEEEEcCCchhc---cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHH
Confidence 99999999999999975321 1124444 8999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCeeEEEeeccCCCCCCC----CCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCc
Q 006864 325 DEEALVRALDSGVVAQAALDVFTEEPPAK----DSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATA 400 (628)
Q Consensus 325 de~aL~~aL~~g~i~ga~lDV~~~EP~~~----~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~ 400 (628)
|+++|+++|++|+++||+||||+.||++. ++|||++|||++|||+|++|.|++++++..+++|+.+|++|+.+.+.
T Consensus 239 d~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~ 318 (404)
T 1sc6_A 239 DIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSA 318 (404)
T ss_dssp CHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred hHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCcce
Confidence 99999999999999999999999999864 57999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcccccccccHHHHHHHHhHHHHHHhcCCCCceEEEEEEeecCCCCCCCcccchHHHHHhhccccccCcccccc
Q 006864 401 INAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLVN 480 (628)
Q Consensus 401 vn~p~~~~~~~~~~~p~~~lAerlG~la~qL~~g~~~~~~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vnlvN 480 (628)
||+|.+.. +
T Consensus 319 vn~p~~~~----------------------------~------------------------------------------- 327 (404)
T 1sc6_A 319 VNFPEVSL----------------------------P------------------------------------------- 327 (404)
T ss_dssp SSSCCCCC----------------------------C-------------------------------------------
T ss_pred eccccccc----------------------------C-------------------------------------------
Confidence 99997650 0
Q ss_pred hHhHHhhcCceEEEEEeecCCCCCCCCceEEEEEEecccccceeeCCCcEEEEEEEEECCeeEEEEECceeEEeecCCcE
Q 006864 481 ADFTAKQKGLRISEERVVADSSPEFPIDSIQVQLSNVDSKFAAAVSENGEISIEGKVKFGIPHLTRVGSFGVDASLEGNL 560 (628)
Q Consensus 481 A~~iAke~GI~i~~~~~~~~~~~~~~~ntv~v~l~~~~~~~~~~~~~~~~~~v~Gt~~gG~~~I~~Idgf~Vd~~~~~~~ 560 (628)
. + | .+.
T Consensus 328 --------------------~----~-~-------------------------------------------------~~r 333 (404)
T 1sc6_A 328 --------------------L----H-G-------------------------------------------------GRR 333 (404)
T ss_dssp --------------------C----C-S-------------------------------------------------SEE
T ss_pred --------------------c----C-C-------------------------------------------------cce
Confidence 0 0 0 123
Q ss_pred EEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCC--CCHHHHHHHhcccCccccC
Q 006864 561 ILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE--PNQDSLKEIGKVHFVARIL 628 (628)
Q Consensus 561 Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~--~~~~~l~~L~~l~~v~~v~ 628 (628)
|++.|+|+||+|++|+++|+++||||+.|++.| +|+.|+|++++|++ ++++++++|++++++.+++
T Consensus 334 l~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vidvD~~~~~~~~~l~~l~~i~~v~~vr 401 (404)
T 1sc6_A 334 LMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRAR 401 (404)
T ss_dssp EEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEEEEECCHHHHHHHHHHHHTSTTEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEEEcCCCCCCCHHHHHHHhcCCCeeEEE
Confidence 678899999999999999999999999999998 88999999999999 9999999999999998764
No 3
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=4.5e-73 Score=614.35 Aligned_cols=392 Identities=32% Similarity=0.479 Sum_probs=347.3
Q ss_pred cCCCCeEEEeCCCCHhHHHHhhcCC--cEEEec-CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccc
Q 006864 87 VTPKPTILVSEKLGEAGLAILRSFG--NVECLY-DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVG 163 (628)
Q Consensus 87 ~~~~~~vlv~~~l~~~~~~~l~~~~--~v~~~~-~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G 163 (628)
++.|+|||+++.+++.+.+.|++.+ ++++.. .++++++.+.++++|++++++.+++++++++++ |+||+|+++|+|
T Consensus 12 ~~~~~kIl~~~~i~~~~~~~l~~~g~~~v~~~~~~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G 90 (416)
T 3k5p_A 12 SRDRINVLLLEGISQTAVEYFKSSGYTNVTHLPKALDKADLIKAISSAHIIGIRSRTQLTEEIFAAA-NRLIAVGCFSVG 90 (416)
T ss_dssp CGGGSCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHC-TTCCEEEECSSC
T ss_pred CCCCcEEEEECCCCHHHHHHHHHCCCcEEEECCCCCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhC-CCcEEEEECccc
Confidence 4457899999999999999998764 666543 468899999999999999998889999999998 599999999999
Q ss_pred cCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHH
Q 006864 164 IDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSE 243 (628)
Q Consensus 164 ~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~ 243 (628)
+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.+.+++|||+||||+|+||+.
T Consensus 91 ~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~ 170 (416)
T 3k5p_A 91 TNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQ 170 (416)
T ss_dssp CTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHH
T ss_pred cCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998777789999999999999999999
Q ss_pred HHHHHHcCCCEEEEECCCCChhHHHHcCC-cccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006864 244 VARRAKGLGMNVIAHDPYAPADKARAVGV-ELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 244 vA~~l~~~G~~V~~~d~~~~~~~a~~~g~-~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~ 322 (628)
+|+++++|||+|++||++..... .+. ...++++++++||+|++|+|++++|+++|+++.|++||+|++|||++||+
T Consensus 171 vA~~l~~~G~~V~~yd~~~~~~~---~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~ 247 (416)
T 3k5p_A 171 VGNLAESLGMTVRYYDTSDKLQY---GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGS 247 (416)
T ss_dssp HHHHHHHTTCEEEEECTTCCCCB---TTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTT
T ss_pred HHHHHHHCCCEEEEECCcchhcc---cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCCh
Confidence 99999999999999998743211 122 23589999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHhCCCeeEEEeeccCCCCCCCC----CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 006864 323 VIDEEALVRALDSGVVAQAALDVFTEEPPAKD----SKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSA 398 (628)
Q Consensus 323 ~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~----~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~ 398 (628)
++|++||+++|++|+|+||+||||+.||++.+ +|||++|||++|||+|++|.|++++++..+++|+.+|++++.+.
T Consensus 248 vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~~~ 327 (416)
T 3k5p_A 248 DVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTV 327 (416)
T ss_dssp SBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred hhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 99999999999999999999999999998765 79999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCcccccccccHHHHHHHHhHHHHHHhcCCCCceEEEEEEeecCCCCCCCcccchHHHHHhhccccccCcccc
Q 006864 399 TAINAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINL 478 (628)
Q Consensus 399 ~~vn~p~~~~~~~~~~~p~~~lAerlG~la~qL~~g~~~~~~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vnl 478 (628)
+.||+|.+. + | . ..
T Consensus 328 ~~Vn~p~~~---~----~-----------------~-------------------------------------~~----- 341 (416)
T 3k5p_A 328 GAVNFPQVQ---L----P-----------------P-------------------------------------RP----- 341 (416)
T ss_dssp TBSSSCCCC---C----C-----------------C-------------------------------------CS-----
T ss_pred ceeeCCCcC---C----C-----------------C-------------------------------------CC-----
Confidence 999986432 1 0 0 00
Q ss_pred cchHhHHhhcCceEEEEEeecCCCCCCCCceEEEEEEecccccceeeCCCcEEEEEEEEECCeeEEEEECceeEEeecCC
Q 006864 479 VNADFTAKQKGLRISEERVVADSSPEFPIDSIQVQLSNVDSKFAAAVSENGEISIEGKVKFGIPHLTRVGSFGVDASLEG 558 (628)
Q Consensus 479 vNA~~iAke~GI~i~~~~~~~~~~~~~~~ntv~v~l~~~~~~~~~~~~~~~~~~v~Gt~~gG~~~I~~Idgf~Vd~~~~~ 558 (628)
+..+
T Consensus 342 -----------------------------~~~r----------------------------------------------- 345 (416)
T 3k5p_A 342 -----------------------------TGTR----------------------------------------------- 345 (416)
T ss_dssp -----------------------------SSEE-----------------------------------------------
T ss_pred -----------------------------CceE-----------------------------------------------
Confidence 0011
Q ss_pred cEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeC--CCCCHHHHHHHhcccCccccC
Q 006864 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVD--EEPNQDSLKEIGKVHFVARIL 628 (628)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD--~~~~~~~l~~L~~l~~v~~v~ 628 (628)
+++.|+++|||+++|.++|+++||||.+|... .+|+.|..++.+| ++.+++++++|++++++.++|
T Consensus 346 --~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~--~~~~~~y~~~d~~~~~~~~~~~~~~l~~~~~~~~~r 413 (416)
T 3k5p_A 346 --FMHVHENRPGILNSLMNVFSHHHINIASQFLQ--TDGEVGYLVMEADGVGEASDAVLQEIREIPGTIRAR 413 (416)
T ss_dssp --EEEEECCCTTHHHHHHHHHHHTTCCEEEEEEE--ECSSCEEEEEEECCCHHHHHHHHHHHHTSTTEEEEE
T ss_pred --EEEEecCCccHHHHHHHHHHHcCCCHHHHhcc--CCCceEEEEEEecCCCCCcHHHHHHHHhCCCEEEEE
Confidence 23569999999999999999999999999874 6788999999999 788889999999999998864
No 4
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=5.3e-70 Score=579.68 Aligned_cols=316 Identities=25% Similarity=0.460 Sum_probs=291.3
Q ss_pred cccCCCCeEEEeCCCCHhHHHHhhcCCcEEEec---CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecc
Q 006864 85 QAVTPKPTILVSEKLGEAGLAILRSFGNVECLY---DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAG 161 (628)
Q Consensus 85 ~~~~~~~~vlv~~~l~~~~~~~l~~~~~v~~~~---~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g 161 (628)
+..+.|||||++++++++.++.|++.+++.+.. ..+++++.+.++++|++++++.++++++++++++|+||+|+++|
T Consensus 23 ~~~~~~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~ 102 (345)
T 4g2n_A 23 MSTHPIQKAFLCRRFTPAIEAELRQRFDLEVNLEDTVLTPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLS 102 (345)
T ss_dssp ----CCCEEEESSCCCHHHHHHHHHHSEEEECTTCCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESS
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHccCCEEEecCCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcC
Confidence 345679999999999999999999888877643 35789999999999999999878999999998756999999999
Q ss_pred cccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc---ccceeeecCCeEEEEecC
Q 006864 162 VGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS---KYVGVSLVGKTLAVMGFG 238 (628)
Q Consensus 162 ~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~GktiGIIGlG 238 (628)
+||||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+|+|+|.+. .+.|.+++|||+||||+|
T Consensus 103 ~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG 182 (345)
T 4g2n_A 103 VGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMG 182 (345)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCS
T ss_pred CcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999853 346899999999999999
Q ss_pred hhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEE
Q 006864 239 KVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVN 317 (628)
Q Consensus 239 ~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN 317 (628)
+||+.+|++|++|||+|++|||+...... ..++..+ ++++++++||+|++|+|++++|+++|+++.|++||+|++|||
T Consensus 183 ~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN 261 (345)
T 4g2n_A 183 RIGRAIATRARGFGLAIHYHNRTRLSHAL-EEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVIN 261 (345)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSCCCHHH-HTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCcchhh-hcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEE
Confidence 99999999999999999999998632222 2277776 999999999999999999999999999999999999999999
Q ss_pred cCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 006864 318 VARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELS 397 (628)
Q Consensus 318 ~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~ 397 (628)
++||+++|++||+++|++|+|+||+||||+.|| +.++|||++|||++|||+|++|.|++++++..+++||.+|++|+++
T Consensus 262 ~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~ 340 (345)
T 4g2n_A 262 ISRGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVP 340 (345)
T ss_dssp CSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999 6899999999999999999999999999999999999999999999
Q ss_pred CCccc
Q 006864 398 ATAIN 402 (628)
Q Consensus 398 ~~~vn 402 (628)
.|.|+
T Consensus 341 ~~~V~ 345 (345)
T 4g2n_A 341 DNLIS 345 (345)
T ss_dssp TTBCC
T ss_pred CCCcC
Confidence 88874
No 5
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1.8e-68 Score=565.71 Aligned_cols=314 Identities=29% Similarity=0.469 Sum_probs=297.0
Q ss_pred CCeEEEeCCCCHhHHHHhhcCCcEEEec---CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006864 90 KPTILVSEKLGEAGLAILRSFGNVECLY---DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (628)
Q Consensus 90 ~~~vlv~~~l~~~~~~~l~~~~~v~~~~---~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~ 166 (628)
|||||++++++++.++.|++.+++.+.. .++.+++.+.++++|++++++.+++++++++++ |+||+|+++|+||||
T Consensus 2 ~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~ 80 (330)
T 4e5n_A 2 LPKLVITHRVHEEILQLLAPHCELITNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQAC-PELRVIGCALKGFDN 80 (330)
T ss_dssp CCEEEECSCCCHHHHHHHTTTCEEECCCSSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHC-TTCCEEEESSSCCTT
T ss_pred CCEEEEecCCCHHHHHHHHhCCeEEEecCCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhC-CCCcEEEECCCcccc
Confidence 6899999999999999999988776542 357899999999999999987789999999998 599999999999999
Q ss_pred ccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc--ccceeeecCCeEEEEecChhHHHH
Q 006864 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS--KYVGVSLVGKTLAVMGFGKVGSEV 244 (628)
Q Consensus 167 iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~--~~~g~~l~GktiGIIGlG~IG~~v 244 (628)
||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|+|... .+.|.+++|||+||||+|+||+.+
T Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~v 160 (330)
T 4e5n_A 81 FDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAM 160 (330)
T ss_dssp BCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHH
T ss_pred cCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999732 346889999999999999999999
Q ss_pred HHHHHcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006864 245 ARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 245 A~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 323 (628)
|++|++|||+|++||++. ..+.+...|+...++++++++||+|++|+|++++|+++++++.|++||+|++|||++||++
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~ 240 (330)
T 4e5n_A 161 ADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSV 240 (330)
T ss_dssp HHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGG
T ss_pred HHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence 999999999999999987 5566667788888999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHhCCCeeEEEeeccCCC-------CCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 006864 324 IDEEALVRALDSGVVAQAALDVFTEE-------PPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGEL 396 (628)
Q Consensus 324 vde~aL~~aL~~g~i~ga~lDV~~~E-------P~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~ 396 (628)
+|+++|+++|++|+|+||+||||+.| |++.++|||++|||++|||+|++|.|++++++..+++||.+|++|+.
T Consensus 241 vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~ 320 (330)
T 4e5n_A 241 VDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGER 320 (330)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred hCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999 98889999999999999999999999999999999999999999999
Q ss_pred CCCcccCC
Q 006864 397 SATAINAP 404 (628)
Q Consensus 397 ~~~~vn~p 404 (628)
+.+.||.|
T Consensus 321 ~~~~vn~~ 328 (330)
T 4e5n_A 321 PINAVNRL 328 (330)
T ss_dssp CTTBSSCC
T ss_pred CCCccCCC
Confidence 99999976
No 6
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.5e-68 Score=562.57 Aligned_cols=315 Identities=27% Similarity=0.402 Sum_probs=256.0
Q ss_pred ccccccCCCCeEEEeCCCCHhHHHHhhcCCcEEEecC-CCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEec
Q 006864 82 LNVQAVTPKPTILVSEKLGEAGLAILRSFGNVECLYD-LSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRA 160 (628)
Q Consensus 82 ~~~~~~~~~~~vlv~~~l~~~~~~~l~~~~~v~~~~~-~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~ 160 (628)
+.+...|.||+||++++++++.++.|++.+++...+. .+++++.+.++++|++++++.+++++++++++ |+||+|+++
T Consensus 22 ~~~~~~~~~~~vl~~~~~~~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~d~li~~~~~~i~~~~l~~~-p~Lk~I~~~ 100 (340)
T 4dgs_A 22 SMLEFRNVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAALPSIRAVATGGGAGLSNEWMEKL-PSLGIIAIN 100 (340)
T ss_dssp -----------CEECSCCCHHHHHTHHHHSCCEETTCGGGHHHHHHHGGGCCEEEEETTTCBCHHHHHHC-SSCCEEEEE
T ss_pred hhhccCCCCCEEEEECCCCHHHHHHHhcCCcEEEeCCCCCHHHHHHHhCCcEEEEEcCCCCCCHHHHhhC-CCCEEEEEC
Confidence 3344556799999999999999999988777765432 46778888889999999998889999999998 599999999
Q ss_pred ccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc-c-cceeeecCCeEEEEecC
Q 006864 161 GVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS-K-YVGVSLVGKTLAVMGFG 238 (628)
Q Consensus 161 g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~-~-~~g~~l~GktiGIIGlG 238 (628)
|+||||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+|+|+|.+. . ..|.+++|||+||||+|
T Consensus 101 g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG 180 (340)
T 4dgs_A 101 GVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLG 180 (340)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCS
T ss_pred CCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999874 2 25789999999999999
Q ss_pred hhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCc-ccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEE
Q 006864 239 KVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE-LVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVN 317 (628)
Q Consensus 239 ~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~-~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN 317 (628)
+||+.+|++|++|||+|++||++... ..++. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||
T Consensus 181 ~IG~~vA~~l~~~G~~V~~~dr~~~~----~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN 256 (340)
T 4dgs_A 181 QIGRALASRAEAFGMSVRYWNRSTLS----GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVN 256 (340)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSCCT----TSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCccc----ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEE
Confidence 99999999999999999999998643 12333 34899999999999999999999999999999999999999999
Q ss_pred cCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 006864 318 VARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELS 397 (628)
Q Consensus 318 ~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~ 397 (628)
++||+++|+++|+++|++|+|+||+||||++||++. +|||++|||++|||+|++|.|++++++..+++||.+|++|+++
T Consensus 257 ~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~ 335 (340)
T 4dgs_A 257 VARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKA 335 (340)
T ss_dssp CSCC--------------CCSSEEEESCCSSSSSCC-SHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999864 6999999999999999999999999999999999999999999
Q ss_pred CCccc
Q 006864 398 ATAIN 402 (628)
Q Consensus 398 ~~~vn 402 (628)
.+.||
T Consensus 336 ~~~Vn 340 (340)
T 4dgs_A 336 PNTVN 340 (340)
T ss_dssp TTBC-
T ss_pred CCCcC
Confidence 99987
No 7
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=1.5e-67 Score=559.55 Aligned_cols=275 Identities=29% Similarity=0.451 Sum_probs=258.1
Q ss_pred hcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchh
Q 006864 127 KISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVS 206 (628)
Q Consensus 127 ~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~ 206 (628)
.++++|++++++.+++++++|+++ |+||+|+++|+||||||+++|+++||.|+|+||+++.+||||++++||++.|++.
T Consensus 39 ~l~~ad~i~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~ 117 (334)
T 3kb6_A 39 ELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLK 117 (334)
T ss_dssp HHHHCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred HhcCCCEEEEeCCCCCCHHHHhcC-CCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccc
Confidence 457899999999899999999998 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccccc-ccceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCC
Q 006864 207 QADASIKAGKWLRS-KYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATAD 285 (628)
Q Consensus 207 ~~~~~~~~g~W~~~-~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aD 285 (628)
++++.+++|.|.+. ...|.+++|||+||||+|+||+.+|+++++|||+|++|||+... ...+.++.++++++++++||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~-~~~~~~~~~~~l~ell~~sD 196 (334)
T 3kb6_A 118 RIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE-DLKEKGCVYTSLDELLKESD 196 (334)
T ss_dssp HHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHTTCEECCHHHHHHHCS
T ss_pred cccccccccccccccccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccch-hhhhcCceecCHHHHHhhCC
Confidence 99999999998754 45689999999999999999999999999999999999998644 34566788889999999999
Q ss_pred EEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCC----------
Q 006864 286 FISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDS---------- 355 (628)
Q Consensus 286 vV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~---------- 355 (628)
+|++|||+|++|++|||++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++||++.++
T Consensus 197 ivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~ 276 (334)
T 3kb6_A 197 VISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDK 276 (334)
T ss_dssp EEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHH
T ss_pred EEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999986555
Q ss_pred -----ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q 006864 356 -----KLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAINA 403 (628)
Q Consensus 356 -----~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~vn~ 403 (628)
|||.+|||++|||+|++|.|++++++..+++||.+|++|+++...+|.
T Consensus 277 ~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n~ 329 (334)
T 3kb6_A 277 NLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGNF 329 (334)
T ss_dssp HHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGGE
T ss_pred cccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCCc
Confidence 688999999999999999999999999999999999999987666664
No 8
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=1.9e-66 Score=551.03 Aligned_cols=311 Identities=26% Similarity=0.378 Sum_probs=282.4
Q ss_pred eEEEeCCCC--HhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccH
Q 006864 92 TILVSEKLG--EAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDL 169 (628)
Q Consensus 92 ~vlv~~~l~--~~~~~~l~~~~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl 169 (628)
||++...-. .+.++.+.+..++++......+|+.+.++++|++++++.+++++++++++ |+||+|++.|+||||||+
T Consensus 2 ki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~id~ 80 (334)
T 2pi1_A 2 NVLFTSVPQEDVPFYQEALKDLSLKIYTTDVSKVPENELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDL 80 (334)
T ss_dssp EEEECSCCTTHHHHHHHHTTTSEEEECSSCGGGSCHHHHHHCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCH
T ss_pred EEEEEccChhhHHHHHHHhhcCCEEEECCCCcHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccCH
Confidence 778755322 23344444444666644444667888999999999987789999999998 489999999999999999
Q ss_pred hHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc-ccceeeecCCeEEEEecChhHHHHHHHH
Q 006864 170 QAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS-KYVGVSLVGKTLAVMGFGKVGSEVARRA 248 (628)
Q Consensus 170 ~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~-~~~g~~l~GktiGIIGlG~IG~~vA~~l 248 (628)
++|+++||.|+|+|++++.+||||++++||+++|+++++++.+++|.|.+. ...|.+|+|||+||||+|+||+++|++|
T Consensus 81 ~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l 160 (334)
T 2pi1_A 81 DYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYG 160 (334)
T ss_dssp HHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHH
T ss_pred HHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999876 5578999999999999999999999999
Q ss_pred HcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHH
Q 006864 249 KGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEA 328 (628)
Q Consensus 249 ~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~a 328 (628)
++|||+|++||++..... .+.|+..+++++++++||+|++|+|++++|+++|+++.|++||+|++|||++||+++|++|
T Consensus 161 ~~~G~~V~~~d~~~~~~~-~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~a 239 (334)
T 2pi1_A 161 LAFGMKVLCYDVVKREDL-KEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDA 239 (334)
T ss_dssp HHTTCEEEEECSSCCHHH-HHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHH
T ss_pred HHCcCEEEEECCCcchhh-HhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHH
Confidence 999999999999876543 2568888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeeEEEeeccCCCCC---------------CCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHc
Q 006864 329 LVRALDSGVVAQAALDVFTEEPP---------------AKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALR 393 (628)
Q Consensus 329 L~~aL~~g~i~ga~lDV~~~EP~---------------~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~ 393 (628)
|+++|++|+|+||+||||++||+ ++++|||++|||++|||+|++|.|+++++...+++||.+|++
T Consensus 240 L~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~ 319 (334)
T 2pi1_A 240 LYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVK 319 (334)
T ss_dssp HHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999997 568899999999999999999999999999999999999999
Q ss_pred CCCCCCcccCC
Q 006864 394 GELSATAINAP 404 (628)
Q Consensus 394 g~~~~~~vn~p 404 (628)
|+++.+.||..
T Consensus 320 g~~~~~~Vn~~ 330 (334)
T 2pi1_A 320 GDLEQIKGNFV 330 (334)
T ss_dssp TCGGGGGGGEE
T ss_pred CCCCCceECcc
Confidence 99999999963
No 9
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=2.2e-65 Score=546.01 Aligned_cols=315 Identities=30% Similarity=0.473 Sum_probs=285.9
Q ss_pred CeEEEeCCCCHh-----HHHHhhcCCcEEEecC--CCHhHHHhhcCCCeEEEE-cCCCCCCHHHHHhcCCcceeEEeccc
Q 006864 91 PTILVSEKLGEA-----GLAILRSFGNVECLYD--LSPEALCEKISQCDALIV-RSGTKVTRSVFEAANGKLKVVGRAGV 162 (628)
Q Consensus 91 ~~vlv~~~l~~~-----~~~~l~~~~~v~~~~~--~~~~el~~~~~~~d~liv-~~~~~v~~~~l~~~~~~Lk~I~~~g~ 162 (628)
+||++++..... .++.|+. .++++... .+++++.+.++++|++++ ++.+++++++++++ |+||+|++.|+
T Consensus 3 mki~~~d~~~~~~~~~~~~~~l~~-~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~-~~Lk~I~~~g~ 80 (352)
T 3gg9_A 3 LKIAVLDDYQDAVRKLDCFSLLQD-HEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRL-PKLKIISQTGR 80 (352)
T ss_dssp CEEEECCCTTCCGGGSGGGGGGTT-SEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTC-TTCCEEEESSC
T ss_pred eEEEEEcCccccchhhhhhhhhcC-ceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhC-CCCeEEEEeCc
Confidence 689999877543 2344543 56665443 367889999999999998 66689999999998 59999999999
Q ss_pred cc----CcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccc----------cceeeec
Q 006864 163 GI----DNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK----------YVGVSLV 228 (628)
Q Consensus 163 G~----D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~----------~~g~~l~ 228 (628)
|+ ||||+++|+++||.|+|+||+ +.+||||++++||+++|+++.+++.+++|+|.+.. ..|.+++
T Consensus 81 G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~ 159 (352)
T 3gg9_A 81 VSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLK 159 (352)
T ss_dssp CCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCT
T ss_pred ccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCC
Confidence 99 999999999999999999999 99999999999999999999999999999998742 3588999
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHh
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~ 307 (628)
|||+||||+|.||+.+|++|++|||+|++||++...+.+.+.|++.+ ++++++++||+|++|+|++++|+++++++.|+
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~ 239 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLT 239 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHh
Confidence 99999999999999999999999999999999864455667788877 99999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHH
Q 006864 308 KMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEA 387 (628)
Q Consensus 308 ~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~ 387 (628)
+||+|++|||++||+++|++||+++|++|+|+||+||||+.||++.++|||++|||++|||+|++|.|+++++...+++|
T Consensus 240 ~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~n 319 (352)
T 3gg9_A 240 RMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQN 319 (352)
T ss_dssp TSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHH
T ss_pred hCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcccCCCCCcc
Q 006864 388 VVGALRGELSATAINAPMVPSE 409 (628)
Q Consensus 388 i~~~l~g~~~~~~vn~p~~~~~ 409 (628)
|.+|++|++ .|.||...+.+.
T Consensus 320 i~~~~~G~p-~~~Vn~~~~~~~ 340 (352)
T 3gg9_A 320 ILDILQGNV-DSVANPTALAPA 340 (352)
T ss_dssp HHHHHTTCC-TTBSCGGGSSCT
T ss_pred HHHHHcCCC-CcccCHHHHHHH
Confidence 999999975 699997655443
No 10
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.5e-65 Score=538.76 Aligned_cols=310 Identities=48% Similarity=0.736 Sum_probs=283.0
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006864 88 TPKPTILVSEKLGEAGLAILRSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (628)
Q Consensus 88 ~~~~~vlv~~~l~~~~~~~l~~~-~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~ 166 (628)
+.+++||+++.+.+...+.|++. .++......+.+++.+.++++|++++++.+++++++++++ |+||||+++|+||||
T Consensus 24 ~~~~~vli~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~ 102 (335)
T 2g76_A 24 ANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDN 102 (335)
T ss_dssp --CCEEEECSCCCHHHHHHHHHHTCEEEECCSCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-SSCCEEEESSSSCTT
T ss_pred ccceEEEEcCCCCHHHHHHHHhCCCEEEECCCCCHHHHHHHhcCceEEEEcCCCCCCHHHHhhC-CCCcEEEECCCCcch
Confidence 44678999999999988888875 3665555568889999999999999988778999999998 599999999999999
Q ss_pred ccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHH
Q 006864 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVAR 246 (628)
Q Consensus 167 iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~ 246 (628)
||+++|+++||.|+|+|++|+.+||||++++||++.|+++++++.+++|.|.+..+.+.+++|||+||||+|+||+.+|+
T Consensus 103 id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~ 182 (335)
T 2g76_A 103 VDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVAT 182 (335)
T ss_dssp BCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHH
T ss_pred hChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987556788999999999999999999999
Q ss_pred HHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcH
Q 006864 247 RAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDE 326 (628)
Q Consensus 247 ~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde 326 (628)
+|++|||+|++||++.....+...|+...++++++++||+|++|+|++++|+++++++.|++||+|++|||++||+++|+
T Consensus 183 ~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~ 262 (335)
T 2g76_A 183 RMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDE 262 (335)
T ss_dssp HHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCH
T ss_pred HHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCH
Confidence 99999999999999876656667788778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 006864 327 EALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSAT 399 (628)
Q Consensus 327 ~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~ 399 (628)
++|+++|++|+|+||+||||+.||+ +++|||++||+|+|||++++|.|++++++..+++|+.+|++|+++.|
T Consensus 263 ~aL~~aL~~g~i~gA~lDV~~~EP~-~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 263 GALLRALQSGQCAGAALDVFTEEPP-RDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHHHHTSEEEEEESCCSSSSC-SCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHhCCccEEEEeecCCCCC-CCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999994 68999999999999999999999999999999999999999987754
No 11
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=2.1e-65 Score=547.54 Aligned_cols=310 Identities=20% Similarity=0.290 Sum_probs=276.7
Q ss_pred CCeEEEeCCC--------CHhHHHHhhcCCcEEEecCCCHhHHHh-hcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEec
Q 006864 90 KPTILVSEKL--------GEAGLAILRSFGNVECLYDLSPEALCE-KISQCDALIVRSGTKVTRSVFEAANGKLKVVGRA 160 (628)
Q Consensus 90 ~~~vlv~~~l--------~~~~~~~l~~~~~v~~~~~~~~~el~~-~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~ 160 (628)
.+++++.++. .++.++.|++.+++......+.+|+.+ .+.++|+++. .+++++++++++ |+||+|++.
T Consensus 27 ~r~ivll~~~~~~~~~~~~~~~~~~L~~~~~v~~~~~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~-p~Lk~I~~~ 103 (365)
T 4hy3_A 27 ERPLAISAPEPRSLDLIFSDEARAALHSKYEIVEADPENIAGLGDDILGRARYIIG--QPPLSAETLARM-PALRSILNV 103 (365)
T ss_dssp -CCEEEEECTTSCHHHHCCHHHHHHHHHHSEEEECCGGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTC-TTCCEEECC
T ss_pred CCCEEEEcCCcccccccCCHHHHHHHhCCcEEEECCCCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhC-CCCeEEEEe
Confidence 3345555554 566888898888876544445566554 4467888774 368999999998 599999975
Q ss_pred -ccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcc--ccc-ccceeeecCCeEEEEe
Q 006864 161 -GVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKW--LRS-KYVGVSLVGKTLAVMG 236 (628)
Q Consensus 161 -g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W--~~~-~~~g~~l~GktiGIIG 236 (628)
|+||||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+|+|+| .+. .+.+.+++|||+||||
T Consensus 104 ~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIG 183 (365)
T 4hy3_A 104 ESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVG 183 (365)
T ss_dssp SSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEEC
T ss_pred cccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEec
Confidence 899999999999999999999999999999999999999999999999999999995 432 3468899999999999
Q ss_pred cChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEE
Q 006864 237 FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIV 316 (628)
Q Consensus 237 lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailI 316 (628)
+|+||+.+|+++++|||+|++|||+...+.+...|+...++++++++||+|++|+|++++|+++++++.|++||+|++||
T Consensus 184 lG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailI 263 (365)
T 4hy3_A 184 FGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFI 263 (365)
T ss_dssp CSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEE
T ss_pred CCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEE
Confidence 99999999999999999999999997666667788888899999999999999999999999999999999999999999
Q ss_pred EcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 006864 317 NVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGEL 396 (628)
Q Consensus 317 N~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~ 396 (628)
|++||+++|++||+++|++|+|+ |+||||+.||++.++|||++|||++|||+|++|.|++++++..+++||.+|++|++
T Consensus 264 N~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~~ 342 (365)
T 4hy3_A 264 LLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMDRGLP 342 (365)
T ss_dssp ECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccC
Q 006864 397 SATAINA 403 (628)
Q Consensus 397 ~~~~vn~ 403 (628)
+.++||.
T Consensus 343 ~~~~vn~ 349 (365)
T 4hy3_A 343 PMRCKRA 349 (365)
T ss_dssp CCSSEEC
T ss_pred ccccccc
Confidence 9999996
No 12
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=6.2e-66 Score=544.11 Aligned_cols=313 Identities=23% Similarity=0.275 Sum_probs=279.7
Q ss_pred cCCCCeEEEeCCCCHhHHHHh-hcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEeccccc
Q 006864 87 VTPKPTILVSEKLGEAGLAIL-RSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGI 164 (628)
Q Consensus 87 ~~~~~~vlv~~~l~~~~~~~l-~~~-~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~ 164 (628)
+++|+|||+++++.+...+.| ++. .++++....+.+++.+.++++|+++++. ++++++++++ |+||||++.|+||
T Consensus 2 ~~~~mkili~~~~~~~~~~~L~~~~~p~~~~~~~~~~~~~~~~~~~ad~li~~~--~~~~~~l~~~-~~Lk~I~~~~~G~ 78 (324)
T 3hg7_A 2 SLSQRTLLLLSQDNAHYERLLKAAHLPHLRILRADNQSDAEKLIGEAHILMAEP--ARAKPLLAKA-NKLSWFQSTYAGV 78 (324)
T ss_dssp --CCEEEEEESTTHHHHHHHHHHSCCTTEEEEECSSHHHHHHHGGGCSEEEECH--HHHGGGGGGC-TTCCEEEESSSCC
T ss_pred CccccEEEEecCCCHHHHHHHhhccCCCeEEEeCCChhHHHHHhCCCEEEEECC--CCCHHHHhhC-CCceEEEECCCCC
Confidence 456789999999999999999 654 4777766567888889999999999853 5667888887 5999999999999
Q ss_pred CcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHH
Q 006864 165 DNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEV 244 (628)
Q Consensus 165 D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~v 244 (628)
||||+++|.+ ||.|+|+||+++.+||||++++||+++|+++++++.+++|+|.+ ..+.+++|||+||||+|+||+++
T Consensus 79 d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~--~~~~~l~g~tvGIIGlG~IG~~v 155 (324)
T 3hg7_A 79 DVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQS--HPYQGLKGRTLLILGTGSIGQHI 155 (324)
T ss_dssp GGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC--CCCCCSTTCEEEEECCSHHHHHH
T ss_pred CccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcC--CCCcccccceEEEEEECHHHHHH
Confidence 9999998865 99999999999999999999999999999999999999999986 35789999999999999999999
Q ss_pred HHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006864 245 ARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (628)
Q Consensus 245 A~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~v 324 (628)
|++|++|||+|++||++..............++++++++||+|++|+|++++|+++++++.|++||+|++|||++||+++
T Consensus 156 A~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~v 235 (324)
T 3hg7_A 156 AHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAI 235 (324)
T ss_dssp HHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGB
T ss_pred HHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhh
Confidence 99999999999999987632211111233468999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccCC
Q 006864 325 DEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAINAP 404 (628)
Q Consensus 325 de~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~vn~p 404 (628)
|++||+++|++|+|+||+||||++||++.++|||++|||++|||+|++|.+ .+++..+++|+.+|++|+++.|.||.+
T Consensus 236 de~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~~G~~~~~~V~~~ 313 (324)
T 3hg7_A 236 NEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFIDGQPLDGKIDFD 313 (324)
T ss_dssp CHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHHTTCCCTTBCCCC
T ss_pred CHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHHcCCCCcceEChh
Confidence 999999999999999999999999999999999999999999999999987 478899999999999999999999987
Q ss_pred CCC
Q 006864 405 MVP 407 (628)
Q Consensus 405 ~~~ 407 (628)
...
T Consensus 314 ~~~ 316 (324)
T 3hg7_A 314 KGY 316 (324)
T ss_dssp ---
T ss_pred hhc
Confidence 544
No 13
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=3.3e-65 Score=542.45 Aligned_cols=312 Identities=22% Similarity=0.329 Sum_probs=273.8
Q ss_pred CCeEEEeCCCC--HhHHHHh-hcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHH-HHHhcC-CcceeEEecccc
Q 006864 90 KPTILVSEKLG--EAGLAIL-RSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRS-VFEAAN-GKLKVVGRAGVG 163 (628)
Q Consensus 90 ~~~vlv~~~l~--~~~~~~l-~~~-~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~-~l~~~~-~~Lk~I~~~g~G 163 (628)
|+||++.+..+ ...++.+ ++. .++.+......+|+.+.++++|++++++.++++++ +|++++ ++||+|+++|+|
T Consensus 1 Mmki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G 80 (343)
T 2yq5_A 1 MTKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQALTSATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVG 80 (343)
T ss_dssp -CEEEEESCCGGGHHHHHHHHHHHTCEEEEESSCCSTTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSC
T ss_pred CceEEEEecCcccHHHHHHHHHhCCeEEEECCCCCCHHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECcee
Confidence 47899877322 2233333 333 35655544344678899999999999988899999 999874 369999999999
Q ss_pred cCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHH-cCcccc-cccceeeecCCeEEEEecChhH
Q 006864 164 IDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIK-AGKWLR-SKYVGVSLVGKTLAVMGFGKVG 241 (628)
Q Consensus 164 ~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~-~g~W~~-~~~~g~~l~GktiGIIGlG~IG 241 (628)
|||||+++|+++||.|+|+|++++.+||||++++||+++|+++.+++.++ +|+|.+ ..+.+.+++|||+||||+|+||
T Consensus 81 ~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG 160 (343)
T 2yq5_A 81 FNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIG 160 (343)
T ss_dssp CTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHH
T ss_pred ecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999 998765 3467899999999999999999
Q ss_pred HHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006864 242 SEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 242 ~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 321 (628)
+.+|++|++|||+|++||++.... .+.++..+++++++++||+|++|+|++++|+++++++.|++||+|++|||+|||
T Consensus 161 ~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 238 (343)
T 2yq5_A 161 SAVAEIFSAMGAKVIAYDVAYNPE--FEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARG 238 (343)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCGG--GTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred HHHHHHHhhCCCEEEEECCChhhh--hhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCC
Confidence 999999999999999999987542 233466779999999999999999999999999999999999999999999999
Q ss_pred chhcHHHHHHHHhCCCeeEEEeeccCCCC--CCCC-----------CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHH
Q 006864 322 GVIDEEALVRALDSGVVAQAALDVFTEEP--PAKD-----------SKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAV 388 (628)
Q Consensus 322 ~~vde~aL~~aL~~g~i~ga~lDV~~~EP--~~~~-----------~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i 388 (628)
+++|++||+++|++|+|+||+||||++|| ++.+ +|||++|||++|||+|++|.|++++++..+++||
T Consensus 239 ~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni 318 (343)
T 2yq5_A 239 ELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQ 318 (343)
T ss_dssp GGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 4455 4899999999999999999999999999999999
Q ss_pred HHHHcCCCCCCcccC
Q 006864 389 VGALRGELSATAINA 403 (628)
Q Consensus 389 ~~~l~g~~~~~~vn~ 403 (628)
.+|++|+.+.|.||.
T Consensus 319 ~~~l~g~~~~~~v~~ 333 (343)
T 2yq5_A 319 LTIAKGGRPRSIVNL 333 (343)
T ss_dssp HHHHTTCCCTTBC--
T ss_pred HHHHcCCCCCceECC
Confidence 999999999999985
No 14
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=3.1e-65 Score=544.44 Aligned_cols=314 Identities=30% Similarity=0.410 Sum_probs=285.9
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcCC-cEEEecC--CCHhHHHhhcCCCeEEEEcCC--CCCCHHHHHhcCCcceeEEeccc
Q 006864 88 TPKPTILVSEKLGEAGLAILRSFG-NVECLYD--LSPEALCEKISQCDALIVRSG--TKVTRSVFEAANGKLKVVGRAGV 162 (628)
Q Consensus 88 ~~~~~vlv~~~l~~~~~~~l~~~~-~v~~~~~--~~~~el~~~~~~~d~liv~~~--~~v~~~~l~~~~~~Lk~I~~~g~ 162 (628)
+.+|++|-.+.......++|++.+ ++.+... .+.+++.+.++++|++|+++. .++++++++++ |+||+|+++|+
T Consensus 17 ~~~~~~lg~~~~~l~~~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~-p~Lk~i~~~g~ 95 (351)
T 3jtm_A 17 TKNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKA-KNLKLLLTAGI 95 (351)
T ss_dssp HHCTTCCSSTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHC-SSCCEEEESSS
T ss_pred ccCCCEEEeccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhC-CCCeEEEEeCe
Confidence 346778877776667788888774 6665432 256789999999999998753 46999999998 59999999999
Q ss_pred ccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccc--cceeeecCCeEEEEecChh
Q 006864 163 GIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK--YVGVSLVGKTLAVMGFGKV 240 (628)
Q Consensus 163 G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~GktiGIIGlG~I 240 (628)
|+||||+++|+++||.|+|+||+|+.+||||++++||+++|++.++++.+++|.|.+.. ..+.+|+|||+||||+|+|
T Consensus 96 G~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~I 175 (351)
T 3jtm_A 96 GSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRI 175 (351)
T ss_dssp CCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHH
T ss_pred eecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHH
Confidence 99999999999999999999999999999999999999999999999999999998642 3478999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEc
Q 006864 241 GSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 241 G~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 318 (628)
|+.+|++|++|||+|++||++. +.+.+.+.|+..+ ++++++++||+|++|+|++++|+++|+++.|++||+|++|||+
T Consensus 176 G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 255 (351)
T 3jtm_A 176 GKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNN 255 (351)
T ss_dssp HHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEEC
Confidence 9999999999999999999885 5566677888776 8999999999999999999999999999999999999999999
Q ss_pred CCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--
Q 006864 319 ARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGEL-- 396 (628)
Q Consensus 319 aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~-- 396 (628)
|||+++|++||+++|++|+|+||+||||+.||++.++|||++||+++|||+|+.|.|++.+++..+++|+.+|++|++
T Consensus 256 aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~~~ 335 (351)
T 3jtm_A 256 ARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFP 335 (351)
T ss_dssp SCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCCccc
Q 006864 397 SATAIN 402 (628)
Q Consensus 397 ~~~~vn 402 (628)
+.|.|+
T Consensus 336 ~~~~i~ 341 (351)
T 3jtm_A 336 TENYIV 341 (351)
T ss_dssp GGGEEE
T ss_pred CceEEe
Confidence 555554
No 15
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=1.7e-65 Score=541.13 Aligned_cols=311 Identities=25% Similarity=0.347 Sum_probs=272.4
Q ss_pred CCeEEEeCCCCHhHHHHhhcCC-cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHH-HhcCCcceeEEecccccCcc
Q 006864 90 KPTILVSEKLGEAGLAILRSFG-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVF-EAANGKLKVVGRAGVGIDNV 167 (628)
Q Consensus 90 ~~~vlv~~~l~~~~~~~l~~~~-~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l-~~~~~~Lk~I~~~g~G~D~i 167 (628)
|+|||++++++++.++.|++.+ ++++.... +...+.+.++|+++++. .++ ++++ +++ |+||||+++|+|||||
T Consensus 1 m~kil~~~~~~~~~~~~L~~~~~~~~~~~~~--~~~~~~~~~ad~l~~~~-~~~-~~~l~~~~-~~Lk~I~~~~~G~d~i 75 (324)
T 3evt_A 1 MSLVLMAQATKPEQLQQLQTTYPDWTFKDAA--AVTAADYDQIEVMYGNH-PLL-KTILARPT-NQLKFVQVISAGVDYL 75 (324)
T ss_dssp -CEEEECSCCCHHHHHHHHHHCTTCEEEETT--SCCTTTGGGEEEEESCC-THH-HHHHHSTT-CCCCEEECSSSCCTTS
T ss_pred CcEEEEecCCCHHHHHHHHhhCCCeEEecCC--ccChHHhCCcEEEEECC-cCh-HHHHHhhC-CCceEEEECCcccccc
Confidence 4689999999999999998754 44332211 11223567899988764 457 8999 566 5999999999999999
Q ss_pred cHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHH-HHHHHcCcccccccceeeecCCeEEEEecChhHHHHHH
Q 006864 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQA-DASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVAR 246 (628)
Q Consensus 168 Dl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~-~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~ 246 (628)
|+++|+++||.|+|+||+++.+||||++++||+++|+++++ ++.+++|+|.+.. .+.+++|||+||||+|+||+.+|+
T Consensus 76 d~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~-~~~~l~gktvGIiGlG~IG~~vA~ 154 (324)
T 3evt_A 76 PLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM-TTSTLTGQQLLIYGTGQIGQSLAA 154 (324)
T ss_dssp CHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS-CCCCSTTCEEEEECCSHHHHHHHH
T ss_pred CHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC-CCccccCCeEEEECcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999 9999999998753 588999999999999999999999
Q ss_pred HHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcH
Q 006864 247 RAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDE 326 (628)
Q Consensus 247 ~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde 326 (628)
+|++|||+|++||++..........+...++++++++||+|++|+|++++|+++++++.|++||+|++|||+|||+++|+
T Consensus 155 ~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 234 (324)
T 3evt_A 155 KASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDT 234 (324)
T ss_dssp HHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCH
T ss_pred HHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhH
Confidence 99999999999998753221111123345899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC-CCCCcccCCC
Q 006864 327 EALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGE-LSATAINAPM 405 (628)
Q Consensus 327 ~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~-~~~~~vn~p~ 405 (628)
+||+++|++|+|+||+||||+.||++.++|||++|||++|||+|++|.|++++++..+++|+.+|++|+ ++.|.||.+.
T Consensus 235 ~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~~~n~V~~~~ 314 (324)
T 3evt_A 235 TALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTLVRNQVDLNR 314 (324)
T ss_dssp HHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCSCBCC---
T ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCCCCceECccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999755 6789999764
Q ss_pred C
Q 006864 406 V 406 (628)
Q Consensus 406 ~ 406 (628)
.
T Consensus 315 ~ 315 (324)
T 3evt_A 315 G 315 (324)
T ss_dssp -
T ss_pred c
Confidence 4
No 16
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=9.3e-64 Score=524.99 Aligned_cols=305 Identities=42% Similarity=0.684 Sum_probs=283.3
Q ss_pred CCCeEEEeCCCCHhHHHHhhcCC-cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcc
Q 006864 89 PKPTILVSEKLGEAGLAILRSFG-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNV 167 (628)
Q Consensus 89 ~~~~vlv~~~l~~~~~~~l~~~~-~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~i 167 (628)
.|+||++++.+.++..+.|++.+ ++......+.+++.+.+.++|++++++.+++++++++++ |+||||++.|+|||||
T Consensus 2 ~~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~i 80 (307)
T 1wwk_A 2 KRMKVLVAAPLHEKAIQVLKDAGLEVIYEEYPDEDRLVELVKDVEAIIVRSKPKVTRRVIESA-PKLKVIARAGVGLDNI 80 (307)
T ss_dssp --CEEEECSCCCHHHHHHHHHTTCEEEECSSCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTC-TTCCEEEESSSCCTTB
T ss_pred CceEEEEeCCCCHHHHHHHHhCCeEEEeCCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCeEEEECCcccccc
Confidence 36789999999988888888743 454433457889999999999999987667999999988 5999999999999999
Q ss_pred cHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHH
Q 006864 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARR 247 (628)
Q Consensus 168 Dl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~ 247 (628)
|+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|.+..+.+.++.|+|+||||+|+||+.+|++
T Consensus 81 d~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~ 160 (307)
T 1wwk_A 81 DVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKI 160 (307)
T ss_dssp CHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999864567889999999999999999999999
Q ss_pred HHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHH
Q 006864 248 AKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEE 327 (628)
Q Consensus 248 l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~ 327 (628)
|++|||+|++||++...+.+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++|++
T Consensus 161 l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~ 240 (307)
T 1wwk_A 161 ANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTN 240 (307)
T ss_dssp HHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred HHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHH
Confidence 99999999999998766556677888789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcC
Q 006864 328 ALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRG 394 (628)
Q Consensus 328 aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g 394 (628)
+|+++|++|+|+||++|||+.||+++++|||++||+++|||++++|.|++.++...+++|+.+|++|
T Consensus 241 aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 241 ALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp HHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999998899999999999999999999999999999999999999976
No 17
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=4.6e-63 Score=525.26 Aligned_cols=310 Identities=26% Similarity=0.370 Sum_probs=277.0
Q ss_pred CeEEEeCC--CCHhHHHHhhcCC---cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCc--ceeEEecccc
Q 006864 91 PTILVSEK--LGEAGLAILRSFG---NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGK--LKVVGRAGVG 163 (628)
Q Consensus 91 ~~vlv~~~--l~~~~~~~l~~~~---~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~--Lk~I~~~g~G 163 (628)
+||++... ..+..++.|++.. ++.+......+++.+.++++|++++++.++++++++++++ + ||+|+++|+|
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~-~~~Lk~I~~~~~G 80 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQALA-DNGITKMSLRNVG 80 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSCCCTTTGGGGTTCSEEEECCSSCBCHHHHHHHH-HTTCCEEEESSSC
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCCCcHHHHHHhcCCcEEEEcCCCCCCHHHHHhcc-ccCCeEEEECCcc
Confidence 47887643 3445566676533 4544433334678888999999999877789999999884 6 9999999999
Q ss_pred cCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHH
Q 006864 164 IDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSE 243 (628)
Q Consensus 164 ~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~ 243 (628)
|||||+++|+++||.|+|+||+++.+||||++++||++.|+++++++.+++|.|.+....+.+++|+|+||||+|+||+.
T Consensus 81 ~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~ 160 (333)
T 1j4a_A 81 VDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQV 160 (333)
T ss_dssp CTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHH
T ss_pred cccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999976556788999999999999999999
Q ss_pred HHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006864 244 VARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 244 vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~ 322 (628)
+|++|++|||+|++||++.... +.. .+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~ 238 (333)
T 1j4a_A 161 FMQIMEGFGAKVITYDIFRNPE-LEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGP 238 (333)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH-HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHHHHCCCEEEEECCCcchh-HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999987544 333 35666 89999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHhCCCeeEEEeeccCCCC--CCCCC-----------ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 006864 323 VIDEEALVRALDSGVVAQAALDVFTEEP--PAKDS-----------KLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVV 389 (628)
Q Consensus 323 ~vde~aL~~aL~~g~i~ga~lDV~~~EP--~~~~~-----------~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~ 389 (628)
++|+++|+++|++|+|+||+||||++|| ++.++ |||++|||++|||+|++|.|++++++..+++|+.
T Consensus 239 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~ 318 (333)
T 1j4a_A 239 LVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNL 318 (333)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 34443 6999999999999999999999999999999999
Q ss_pred HHHcCCCCCCcccC
Q 006864 390 GALRGELSATAINA 403 (628)
Q Consensus 390 ~~l~g~~~~~~vn~ 403 (628)
+|++|+++.+.||.
T Consensus 319 ~~~~g~~~~~~v~~ 332 (333)
T 1j4a_A 319 ELVEGKEAETPVKV 332 (333)
T ss_dssp HHHTTCCCSSBCCC
T ss_pred HHHcCCCCCccccC
Confidence 99999999999884
No 18
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=3.4e-63 Score=526.23 Aligned_cols=311 Identities=27% Similarity=0.406 Sum_probs=275.3
Q ss_pred eEEEeC--CCCHhHHHHhhc-CC-cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCc--ceeEEecccccC
Q 006864 92 TILVSE--KLGEAGLAILRS-FG-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGK--LKVVGRAGVGID 165 (628)
Q Consensus 92 ~vlv~~--~l~~~~~~~l~~-~~-~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~--Lk~I~~~g~G~D 165 (628)
||++.+ +.....++.+.+ .+ ++.+......+++.+.++++|++++++.++++++++++++ + ||+|+++|+|||
T Consensus 2 kil~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~-~~~Lk~I~~~~~G~d 80 (333)
T 1dxy_A 2 KIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMH-AYGIKFLTIRNVGTD 80 (333)
T ss_dssp EEEECSCCTTTHHHHHHHHHHHCCEEEECSSCCCTTGGGGGTTCSEEEECCSSCBCHHHHHHHH-HTTCCEEEESSSCCT
T ss_pred EEEEEeccccCHHHHHHHHHhCCeEEEEcCCCChHHHHHHhcCCeEEEEcCCCCCCHHHHHhCc-ccCceEEEEcCcccC
Confidence 677754 445556666644 22 4554443345677888999999999877789999999884 6 999999999999
Q ss_pred cccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccc-cccceeeecCCeEEEEecChhHHHH
Q 006864 166 NVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLR-SKYVGVSLVGKTLAVMGFGKVGSEV 244 (628)
Q Consensus 166 ~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~-~~~~g~~l~GktiGIIGlG~IG~~v 244 (628)
|||+++|+++||.|+|+||+++.+||||++++||++.|+++++++.+|+|.|.+ ....+.++.|+|+||||+|+||+.+
T Consensus 81 ~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~ 160 (333)
T 1dxy_A 81 NIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVA 160 (333)
T ss_dssp TBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHH
T ss_pred ccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999964 4457889999999999999999999
Q ss_pred HHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006864 245 ARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (628)
Q Consensus 245 A~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~v 324 (628)
|++|++|||+|++||++.... +.. .+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~v 238 (333)
T 1dxy_A 161 IKLFKGFGAKVIAYDPYPMKG-DHP-DFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLI 238 (333)
T ss_dssp HHHHHHTTCEEEEECSSCCSS-CCT-TCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSB
T ss_pred HHHHHHCCCEEEEECCCcchh-hHh-ccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCccc
Confidence 999999999999999986433 221 245669999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCeeEEEeeccCCCCC--C--------CC---CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHH
Q 006864 325 DEEALVRALDSGVVAQAALDVFTEEPP--A--------KD---SKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGA 391 (628)
Q Consensus 325 de~aL~~aL~~g~i~ga~lDV~~~EP~--~--------~~---~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~ 391 (628)
|+++|+++|++|+|+||+||||++||+ + .+ +|||++|||++|||+|++|.|++++++..+++|+.+|
T Consensus 239 d~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~ 318 (333)
T 1dxy_A 239 DTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDF 318 (333)
T ss_dssp CHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999983 1 12 5899999999999999999999999999999999999
Q ss_pred HcCCCCCCcccCCC
Q 006864 392 LRGELSATAINAPM 405 (628)
Q Consensus 392 l~g~~~~~~vn~p~ 405 (628)
++|+.+.+.||.|.
T Consensus 319 ~~g~~~~~~v~~~~ 332 (333)
T 1dxy_A 319 LTKGETSTEVTGPA 332 (333)
T ss_dssp HHHSCCTTEECC--
T ss_pred HcCCCCCceeCCCC
Confidence 99999999999873
No 19
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=4e-62 Score=513.89 Aligned_cols=304 Identities=36% Similarity=0.531 Sum_probs=283.1
Q ss_pred CCeEEEeCCCCHhHHHHhhcCC-cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccc
Q 006864 90 KPTILVSEKLGEAGLAILRSFG-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVD 168 (628)
Q Consensus 90 ~~~vlv~~~l~~~~~~~l~~~~-~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iD 168 (628)
++|||+++++.+...+.|++.+ ++.+....+.+++.+.++++|++++++.+++++++++++ |+||+|++.|+||||||
T Consensus 5 ~mkil~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id 83 (313)
T 2ekl_A 5 TVKALITDPIDEILIKTLREKGIQVDYMPEISKEELLNIIGNYDIIVVRSRTKVTKDVIEKG-KKLKIIARAGIGLDNID 83 (313)
T ss_dssp CCEEEECSCCCHHHHHHHHHTTCEEEECTTCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-TTCCEEEECSSCCTTBC
T ss_pred ceEEEEECCCCHHHHHHHHhCCcEEEeCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEEcCCCCCccC
Confidence 4589999999998888888763 554434467889999999999999987778999999998 59999999999999999
Q ss_pred HhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHH
Q 006864 169 LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRA 248 (628)
Q Consensus 169 l~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l 248 (628)
+++|+++||.|+|+||+|+.+||||++++||++.|+++++++.+++|.|. .+.+.++.|+|+||||+|+||+.+|++|
T Consensus 84 ~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~--~~~~~~l~g~~vgIIG~G~IG~~~A~~l 161 (313)
T 2ekl_A 84 TEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFK--KIEGLELAGKTIGIVGFGRIGTKVGIIA 161 (313)
T ss_dssp HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCC--CCCCCCCTTCEEEEESCSHHHHHHHHHH
T ss_pred HHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC--CCCCCCCCCCEEEEEeeCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996 3568899999999999999999999999
Q ss_pred HcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHH
Q 006864 249 KGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEA 328 (628)
Q Consensus 249 ~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~a 328 (628)
++|||+|++||++.....+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++|+++
T Consensus 162 ~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~a 241 (313)
T 2ekl_A 162 NAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKA 241 (313)
T ss_dssp HHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHH
T ss_pred HHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHH
Confidence 99999999999987665566778877799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeeEEEeeccCCCCCCCCC---ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 006864 329 LVRALDSGVVAQAALDVFTEEPPAKDS---KLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELS 397 (628)
Q Consensus 329 L~~aL~~g~i~ga~lDV~~~EP~~~~~---~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~ 397 (628)
|+++|++|+++||++|||+.||++ ++ |||++||+++|||++++|.|++++++..+++|+.+|++|++.
T Consensus 242 L~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 242 LLDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGM 312 (313)
T ss_dssp HHHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999987 66 999999999999999999999999999999999999999864
No 20
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=7.1e-62 Score=513.46 Aligned_cols=306 Identities=31% Similarity=0.483 Sum_probs=283.5
Q ss_pred CCeEEEeCCCCHhHHHHhhcCCcEEEec---CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCc-ceeEEecccccC
Q 006864 90 KPTILVSEKLGEAGLAILRSFGNVECLY---DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGK-LKVVGRAGVGID 165 (628)
Q Consensus 90 ~~~vlv~~~l~~~~~~~l~~~~~v~~~~---~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~-Lk~I~~~g~G~D 165 (628)
|++|++++.+.++.++.|++.+++++.. ..+.+++.+.++++|++++++.++++++++++++ + ||||++.|+|||
T Consensus 1 m~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~-~~Lk~I~~~~~G~d 79 (320)
T 1gdh_A 1 KKKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIP-ENIKCISTYSIGFD 79 (320)
T ss_dssp CCEEEESSCCCHHHHHHHHTTSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSC-TTCCEEEEESSCCT
T ss_pred CcEEEEcCCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhCC-ccceEEEECCcccc
Confidence 3689999999999899998766766543 2577899999999999999877789999999985 8 999999999999
Q ss_pred cccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc---ccceeeecCCeEEEEecChhHH
Q 006864 166 NVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS---KYVGVSLVGKTLAVMGFGKVGS 242 (628)
Q Consensus 166 ~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~GktiGIIGlG~IG~ 242 (628)
|||+++|+++||.|+|+||+|+.+||||++++||++.|+++++++.+++|.|... .+.+.++.|+||||||+|+||+
T Consensus 80 ~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~ 159 (320)
T 1gdh_A 80 HIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQ 159 (320)
T ss_dssp TBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHH
T ss_pred cccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHH
Confidence 9999999999999999999999999999999999999999999999999999731 3467899999999999999999
Q ss_pred HHHHHHHcCCCEEEEECC-CCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCC
Q 006864 243 EVARRAKGLGMNVIAHDP-YAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 243 ~vA~~l~~~G~~V~~~d~-~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR 320 (628)
.+|++|++|||+|++||+ +.....+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||++|
T Consensus 160 ~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 160 ALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp HHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred HHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 999999999999999999 876555666788777 899999999999999999999999999999999999999999999
Q ss_pred CchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 006864 321 GGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSA 398 (628)
Q Consensus 321 g~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~ 398 (628)
|+++|+++|.++|++|+|+||++|||+.|| +.++|||++||+|+|||++++|.|++++++..+ +|+.+|++|+++.
T Consensus 240 g~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~~ 315 (320)
T 1gdh_A 240 GDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGADM 315 (320)
T ss_dssp GGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSCC
T ss_pred CcccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCCc
Confidence 999999999999999999999999999999 789999999999999999999999999999999 9999999998753
No 21
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=1.8e-62 Score=520.30 Aligned_cols=308 Identities=24% Similarity=0.343 Sum_probs=275.2
Q ss_pred eEEEeC--CCCHhHHHHhhcCC--cEEEecC-CCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCc--ceeEEeccccc
Q 006864 92 TILVSE--KLGEAGLAILRSFG--NVECLYD-LSPEALCEKISQCDALIVRSGTKVTRSVFEAANGK--LKVVGRAGVGI 164 (628)
Q Consensus 92 ~vlv~~--~l~~~~~~~l~~~~--~v~~~~~-~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~--Lk~I~~~g~G~ 164 (628)
||++.+ +..++.++.|.+.. ++..... .+.+++.+.++++|++++++.++++++++++++ + ||+|++.|+||
T Consensus 2 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~-~~~Lk~I~~~~~G~ 80 (331)
T 1xdw_A 2 KVLCYGVRDVELPIFEACNKEFGYDIKCVPDYLNTKETAEMAAGFDAVILRGNCFANKQNLDIYK-KLGVKYILTRTAGT 80 (331)
T ss_dssp EEEECSCCTTTHHHHHHHGGGTCCEEEECSCCSCSHHHHHTTTTCSEEEECTTCCBCHHHHHHHH-HHTCCEEEESSSCC
T ss_pred EEEEEecCccCHHHHHHHHHhcCeEEEECCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhCc-ccCceEEEEccccc
Confidence 688854 55566777775533 3444332 355888899999999999877889999999884 7 99999999999
Q ss_pred CcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccc-cccceeeecCCeEEEEecChhHHH
Q 006864 165 DNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLR-SKYVGVSLVGKTLAVMGFGKVGSE 243 (628)
Q Consensus 165 D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~-~~~~g~~l~GktiGIIGlG~IG~~ 243 (628)
||||+++|+++||.|+|+||+++.+||||++++||++.|+++++++.+++|.|.+ ....+.++.|||+||||+|+||+.
T Consensus 81 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~ 160 (331)
T 1xdw_A 81 DHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRV 160 (331)
T ss_dssp TTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHH
T ss_pred cccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999964 445688999999999999999999
Q ss_pred HHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006864 244 VARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 244 vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 323 (628)
+|++|++|||+|++||++.... +. ..+...++++++++||+|++|+|++++|+++++++.|++||+|++|||++||++
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~ 238 (331)
T 1xdw_A 161 AAQIFHGMGATVIGEDVFEIKG-IE-DYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQL 238 (331)
T ss_dssp HHHHHHHTTCEEEEECSSCCCS-CT-TTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred HHHHHHHCCCEEEEECCCccHH-HH-hccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence 9999999999999999986433 22 225566999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHhCCCeeEEEeeccCCCCC--CCC-------C----ccccC-CcEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 006864 324 IDEEALVRALDSGVVAQAALDVFTEEPP--AKD-------S----KLVQH-ENVTVTPHLGASTKEAQEGVAIEIAEAVV 389 (628)
Q Consensus 324 vde~aL~~aL~~g~i~ga~lDV~~~EP~--~~~-------~----~L~~~-~nvilTPHig~~T~ea~~~~~~~~~~~i~ 389 (628)
+|+++|+++|++|+|+||+||||++||+ +.+ + |||++ |||++|||+|++|.|++++++..+++|+.
T Consensus 239 vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~ 318 (331)
T 1xdw_A 239 VDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLK 318 (331)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999994 222 3 79999 99999999999999999999999999999
Q ss_pred HHHcCCCCCCccc
Q 006864 390 GALRGELSATAIN 402 (628)
Q Consensus 390 ~~l~g~~~~~~vn 402 (628)
+|++|+++.|.||
T Consensus 319 ~~~~g~~~~~~v~ 331 (331)
T 1xdw_A 319 DLAETGDCPNKIK 331 (331)
T ss_dssp HHHHHSCCTTBCC
T ss_pred HHHcCCCCCCCCC
Confidence 9999999888886
No 22
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-61 Score=509.69 Aligned_cols=304 Identities=34% Similarity=0.493 Sum_probs=280.3
Q ss_pred CeEEEeCCCCHhHHHHhhcC-CcEEEec--CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcc
Q 006864 91 PTILVSEKLGEAGLAILRSF-GNVECLY--DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNV 167 (628)
Q Consensus 91 ~~vlv~~~l~~~~~~~l~~~-~~v~~~~--~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~i 167 (628)
||||+++.++++.++.|++. +++.+.. ..+.+++.+.++++|++++++.+++++++++++ |+||||+++|+|||||
T Consensus 1 ~~vl~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~i 79 (311)
T 2cuk_A 1 MRVLVTRTLPGKALDRLRERGLEVEVHRGLFLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRA-KGLKVIACYSVGVDHV 79 (311)
T ss_dssp CEEEESSCCSSSTTHHHHHTTCEEEECCSSCCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHS-TTCCEEECSSSCCTTB
T ss_pred CEEEEeCCCCHHHHHHHHhcCCeEEEecCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCcCcccc
Confidence 57899998888888888887 5766542 347789999999999999987778999999998 5999999999999999
Q ss_pred cHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc---ccceeeecCCeEEEEecChhHHHH
Q 006864 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS---KYVGVSLVGKTLAVMGFGKVGSEV 244 (628)
Q Consensus 168 Dl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~GktiGIIGlG~IG~~v 244 (628)
|+++|+++||.|+|+||+|+.+||||++++||++.|+++++++.+++|.|.+. .+.+.++.|+|+||||+|+||+.+
T Consensus 80 d~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~ 159 (311)
T 2cuk_A 80 DLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAV 159 (311)
T ss_dssp CHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHH
T ss_pred CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999642 235789999999999999999999
Q ss_pred HHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006864 245 ARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (628)
Q Consensus 245 A~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~v 324 (628)
|++|++|||+|++||++..... +...++++++++||+|++|+|++++|+++++++.|+.||+|+++||++||+++
T Consensus 160 A~~l~~~G~~V~~~d~~~~~~~-----~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~v 234 (311)
T 2cuk_A 160 AKRALAFGMRVVYHARTPKPLP-----YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALV 234 (311)
T ss_dssp HHHHHHTTCEEEEECSSCCSSS-----SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGB
T ss_pred HHHHHHCCCEEEEECCCCcccc-----cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCcc
Confidence 9999999999999999864322 34568999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Q 006864 325 DEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAI 401 (628)
Q Consensus 325 de~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~v 401 (628)
|+++|.++|+ |+|+||++|||+.||++.++|||++||+|+|||++++|.|++++++..+++|+.+|++|+.+.|.|
T Consensus 235 d~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 235 DTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPV 310 (311)
T ss_dssp CHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBC
T ss_pred CHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999999 999999999999999888999999999999999999999999999999999999999999887765
No 23
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.6e-62 Score=526.74 Aligned_cols=314 Identities=26% Similarity=0.355 Sum_probs=283.5
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcCC-cEEEecC--CCHhHHHhhcCCCeEEEEcCC--CCCCHHHHHhcCCcceeEEeccc
Q 006864 88 TPKPTILVSEKLGEAGLAILRSFG-NVECLYD--LSPEALCEKISQCDALIVRSG--TKVTRSVFEAANGKLKVVGRAGV 162 (628)
Q Consensus 88 ~~~~~vlv~~~l~~~~~~~l~~~~-~v~~~~~--~~~~el~~~~~~~d~liv~~~--~~v~~~~l~~~~~~Lk~I~~~g~ 162 (628)
..+|+||+.+...+...+.|++.+ ++.+... .+.+++.+.++++|+++++.. .++++++++++ |+||+|+++|+
T Consensus 15 ~~~~~vl~~d~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~ 93 (364)
T 2j6i_A 15 ADEEKLYGCTENKLGIANWLKDQGHELITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKA-KKLKLVVVAGV 93 (364)
T ss_dssp HHCTTCTTBTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHC-TTCCEEEESSS
T ss_pred ccCceEEEecCccHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhC-CCCeEEEECCc
Confidence 357889999988888788888754 6655432 246788899999999998652 46999999998 59999999999
Q ss_pred ccCcccHhHHHhc--CceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccc--cceeeecCCeEEEEecC
Q 006864 163 GIDNVDLQAATEF--GCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK--YVGVSLVGKTLAVMGFG 238 (628)
Q Consensus 163 G~D~iDl~aa~~~--GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~GktiGIIGlG 238 (628)
|+||||+++|+++ ||.|+|+||+|+.+||||++++||++.|+++++++.+++|.|.+.. ..+.+++|+|+||||+|
T Consensus 94 G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G 173 (364)
T 2j6i_A 94 GSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAG 173 (364)
T ss_dssp CCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCS
T ss_pred ccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcC
Confidence 9999999999999 9999999999999999999999999999999999999999997532 35789999999999999
Q ss_pred hhHHHHHHHHHcCCCE-EEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEE
Q 006864 239 KVGSEVARRAKGLGMN-VIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRI 315 (628)
Q Consensus 239 ~IG~~vA~~l~~~G~~-V~~~d~~~-~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gail 315 (628)
+||+.+|++|++|||+ |++||++. ..+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|++||+|++|
T Consensus 174 ~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~l 253 (364)
T 2j6i_A 174 RIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWL 253 (364)
T ss_dssp HHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEE
Confidence 9999999999999997 99999876 4455667787665 8999999999999999999999999999999999999999
Q ss_pred EEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccC--C---cEEEcCCCCCCcHHHHHHHHHHHHHHHHH
Q 006864 316 VNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQH--E---NVTVTPHLGASTKEAQEGVAIEIAEAVVG 390 (628)
Q Consensus 316 IN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~--~---nvilTPHig~~T~ea~~~~~~~~~~~i~~ 390 (628)
||++||+++|+++|+++|++|+|+||+||||++||++.++|||.+ | ||++|||+|++|.|++.+++..+++|+.+
T Consensus 254 In~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~ 333 (364)
T 2j6i_A 254 VNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILES 333 (364)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHH
T ss_pred EECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 9 99999999999999999999999999999
Q ss_pred HHcCCCCCCccc
Q 006864 391 ALRGELSATAIN 402 (628)
Q Consensus 391 ~l~g~~~~~~vn 402 (628)
|++|+.+...+|
T Consensus 334 ~~~g~~~~~~~n 345 (364)
T 2j6i_A 334 FFTGKFDYRPQD 345 (364)
T ss_dssp HHTTCCCCCGGG
T ss_pred HHcCCCCCCCCc
Confidence 999995444444
No 24
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=1.7e-61 Score=516.02 Aligned_cols=321 Identities=26% Similarity=0.356 Sum_probs=290.1
Q ss_pred CCCCeEEEeCC-C--CHhHHHHhhcCCcEEEecCCCHhHHHhhcC-----CCeEEEEcC------CCCCCHHHHHhcCCc
Q 006864 88 TPKPTILVSEK-L--GEAGLAILRSFGNVECLYDLSPEALCEKIS-----QCDALIVRS------GTKVTRSVFEAANGK 153 (628)
Q Consensus 88 ~~~~~vlv~~~-l--~~~~~~~l~~~~~v~~~~~~~~~el~~~~~-----~~d~liv~~------~~~v~~~~l~~~~~~ 153 (628)
|.||+||++++ + .+..++.|++.+++......+.+++.+.++ ++|++++++ .+++++++|++++++
T Consensus 1 m~~~~vl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~ 80 (348)
T 2w2k_A 1 MPRPRVLLLGDPARHLDDLWSDFQQKFEVIPANLTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSS 80 (348)
T ss_dssp -CCCEEEECSSCCSSCHHHHHHHHHHSEEEECCCCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTT
T ss_pred CCCcEEEEECCccccChHHHHHHHhcceEEecCCCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccC
Confidence 45789999987 5 367788887766776655568899988887 899988752 358999999988546
Q ss_pred ceeEEecccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCc---ccccc----cceee
Q 006864 154 LKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGK---WLRSK----YVGVS 226 (628)
Q Consensus 154 Lk~I~~~g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~---W~~~~----~~g~~ 226 (628)
||+|+++|+||||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|. |.+.. ..|.+
T Consensus 81 Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~ 160 (348)
T 2w2k_A 81 LKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHN 160 (348)
T ss_dssp CCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCC
T ss_pred ceEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999 95321 35789
Q ss_pred ecCCeEEEEecChhHHHHHHHHH-cCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccH
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAK-GLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~-~~G~~V~~~d~~~-~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
++||||||||+|+||+.+|++++ +|||+|++||++. ..+.+.+.|+..+ ++++++++||+|++|+|++++|++++++
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~ 240 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDE 240 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCH
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhH
Confidence 99999999999999999999999 9999999999986 4444556687776 8999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHH
Q 006864 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIE 383 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~ 383 (628)
+.++.||+|++|||++||+++|+++|.++|++|+|+||++|||+.|| +.+++||.+||||+|||+|+.|.|++.+++..
T Consensus 241 ~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~ 319 (348)
T 2w2k_A 241 AFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTTHIGGVAIETFHEFERL 319 (348)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECCSCTTCSHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 56889999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCcc
Q 006864 384 IAEAVVGALRGELSATAINAPMVPSE 409 (628)
Q Consensus 384 ~~~~i~~~l~g~~~~~~vn~p~~~~~ 409 (628)
+++||.+|++|+.+.+.||.|.+.++
T Consensus 320 ~~~ni~~~~~g~~~~~~v~~~~~~~~ 345 (348)
T 2w2k_A 320 TMTNIDRFLLQGKPLLTPAGKVFAPS 345 (348)
T ss_dssp HHHHHHHHHHTCCCCSSBCSCCCCCC
T ss_pred HHHHHHHHHcCCCCcceecccccCcc
Confidence 99999999999999999999887664
No 25
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=2.7e-61 Score=511.27 Aligned_cols=309 Identities=25% Similarity=0.352 Sum_probs=282.2
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcCCcEEEec-CCCHhH-HHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccC
Q 006864 88 TPKPTILVSEKLGEAGLAILRSFGNVECLY-DLSPEA-LCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGID 165 (628)
Q Consensus 88 ~~~~~vlv~~~l~~~~~~~l~~~~~v~~~~-~~~~~e-l~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D 165 (628)
|.||+||+++++.+..++.|++.+++.... ..+.++ +.+.++++|++++++.+++++++++++ |+||+|+++|+|||
T Consensus 21 m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-p~Lk~I~~~~~G~d 99 (333)
T 3ba1_A 21 MEAIGVLMMCPMSTYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDAL-PKLEIVSSFSVGLD 99 (333)
T ss_dssp -CCCEEEECSCCCHHHHHHHHHHSEEEEGGGCSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHC-TTCCEEEESSSCCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHhcCCEEEecCCCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhC-CCCcEEEEcCcccc
Confidence 667899999999999999998766766543 234445 666789999999987778999999998 59999999999999
Q ss_pred cccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccc-cceeeecCCeEEEEecChhHHHH
Q 006864 166 NVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK-YVGVSLVGKTLAVMGFGKVGSEV 244 (628)
Q Consensus 166 ~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~-~~g~~l~GktiGIIGlG~IG~~v 244 (628)
|||+++|+++||.|+|+||+|+.+||||++++||+++|++.++++.+|+|.|.+.. ..|.+++||+|||||+|+||+.+
T Consensus 100 ~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~v 179 (333)
T 3ba1_A 100 KVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAV 179 (333)
T ss_dssp TBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHH
T ss_pred ccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997533 35789999999999999999999
Q ss_pred HHHHHcCCCEEEEECCCCChhHHHHcCCc-ccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006864 245 ARRAKGLGMNVIAHDPYAPADKARAVGVE-LVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 245 A~~l~~~G~~V~~~d~~~~~~~a~~~g~~-~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 323 (628)
|++|++|||+|++||++.... .|+. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||.+
T Consensus 180 A~~l~~~G~~V~~~dr~~~~~----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~ 255 (333)
T 3ba1_A 180 AERAEAFDCPISYFSRSKKPN----TNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPH 255 (333)
T ss_dssp HHHHHTTTCCEEEECSSCCTT----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred HHHHHHCCCEEEEECCCchhc----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 999999999999999886432 2544 34899999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q 006864 324 IDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAIN 402 (628)
Q Consensus 324 vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~vn 402 (628)
+|+++|+++|++|+++||++|||+.||++. +|||++||||+|||+|+.|.|++++++..+++|+.+|++|+++.+.||
T Consensus 256 vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 256 VDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp BCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCSSBCC
T ss_pred hCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999999999865 999999999999999999999999999999999999999999988886
No 26
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1.7e-61 Score=521.82 Aligned_cols=298 Identities=26% Similarity=0.369 Sum_probs=272.0
Q ss_pred HHhhcCC-cEEEecC--CCHhHHHhhcCCCeEEEEcC--CCCCCHHHHHhcCCcceeEEecccccCcccHhHHHhcCceE
Q 006864 105 AILRSFG-NVECLYD--LSPEALCEKISQCDALIVRS--GTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLV 179 (628)
Q Consensus 105 ~~l~~~~-~v~~~~~--~~~~el~~~~~~~d~liv~~--~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl~aa~~~GI~V 179 (628)
+.|++.+ ++.+.++ .+.+++.+.++++|+++++. .+++++++|+++ |+||+|+++|+|+||||+++|+++||.|
T Consensus 61 ~~l~~~g~~v~~~~~~~~~~~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d~iD~~aa~~~gI~V 139 (393)
T 2nac_A 61 KYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKA-KNLKLALTAGIGSDHVDLQSAIDRNVTV 139 (393)
T ss_dssp HHHHHTTCEEEEESCCSSTTSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHTTCEE
T ss_pred HHHHhCCCEEEEecCCCCCHHHHHHhccCCCEEEEcCccCCCCCHHHHhhC-CCCcEEEEcCccccccCHHHHhcCCEEE
Confidence 4666654 6655333 24567889999999999874 357999999998 5999999999999999999999999999
Q ss_pred EcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccc--cceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEE
Q 006864 180 VNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK--YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA 257 (628)
Q Consensus 180 ~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~ 257 (628)
+|+|++|+.+||||++++||++.|++.++++.+++|+|+... ..+.+|+|||+||||+|+||+.+|++|++|||+|++
T Consensus 140 ~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~ 219 (393)
T 2nac_A 140 AEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHY 219 (393)
T ss_dssp EECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEE
T ss_pred EeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE
Confidence 999999999999999999999999999999999999997532 247899999999999999999999999999999999
Q ss_pred ECCCC-ChhHHHHcCCcc-cCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 258 HDPYA-PADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 258 ~d~~~-~~~~a~~~g~~~-~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
||++. ..+.+...|+.. .++++++++||+|++|+|++++|+++|+++.|++||+|++|||++||+++|+++|+++|++
T Consensus 220 ~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 220 TDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp ECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred EcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHc
Confidence 99986 445566678775 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q 006864 336 GVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAINA 403 (628)
Q Consensus 336 g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~vn~ 403 (628)
|+|+||+||||+.||++.++|||++|||++|||+|+.|.|++++++..+++||.+|++|+++.|.++.
T Consensus 300 g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~~~ 367 (393)
T 2nac_A 300 GRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYLI 367 (393)
T ss_dssp TSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGGEE
T ss_pred CCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCcceeEe
Confidence 99999999999999998999999999999999999999999999999999999999999999887763
No 27
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=7.5e-61 Score=510.38 Aligned_cols=315 Identities=29% Similarity=0.480 Sum_probs=279.2
Q ss_pred cCCCCeEEEeCCCC-HhHHHHhhcCCcEEEecCCCHhHHHhhc-CCCeEEEEcCCCCCCHHHHHhcCCcceeEEeccccc
Q 006864 87 VTPKPTILVSEKLG-EAGLAILRSFGNVECLYDLSPEALCEKI-SQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGI 164 (628)
Q Consensus 87 ~~~~~~vlv~~~l~-~~~~~~l~~~~~v~~~~~~~~~el~~~~-~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~ 164 (628)
.+.||+|++.+... +..++.++...++......+.+|+.+.+ .++|+++++..+++++++++++ ++||+|+++|+||
T Consensus 18 ~~~kp~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~ 96 (347)
T 1mx3_A 18 GSHMPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKF-KALRIIVRIGSGF 96 (347)
T ss_dssp ---CCEEEESSCSCCTTTHHHHTTTCEEEECCCSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTC-SSCCEEEESSSCC
T ss_pred CCCCCEEEEEcCCcchhhHHHhhccceEEecCCCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhC-CCCCEEEEccccc
Confidence 35589999887432 2236777776677665556677777764 7899988887778999999988 5999999999999
Q ss_pred CcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccc------cce-eeecCCeEEEEec
Q 006864 165 DNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK------YVG-VSLVGKTLAVMGF 237 (628)
Q Consensus 165 D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~------~~g-~~l~GktiGIIGl 237 (628)
||||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|.... ..| .+++|+|+||||+
T Consensus 97 d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~ 176 (347)
T 1mx3_A 97 DNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGL 176 (347)
T ss_dssp TTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECC
T ss_pred CcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeE
Confidence 999999999999999999999999999999999999999999999999999996421 113 6899999999999
Q ss_pred ChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEE
Q 006864 238 GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIV 316 (628)
Q Consensus 238 G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailI 316 (628)
|+||+.+|++|++|||+|++||++.....+...|+..+ ++++++++||+|++|+|++++|+++++++.|++||+|++||
T Consensus 177 G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailI 256 (347)
T 1mx3_A 177 GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLV 256 (347)
T ss_dssp SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEE
Confidence 99999999999999999999999875545566777655 89999999999999999999999999999999999999999
Q ss_pred EcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCC-CCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 006864 317 NVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPA-KDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGE 395 (628)
Q Consensus 317 N~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~-~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~ 395 (628)
|++||+++|+++|+++|++|+|+||++|||+.||++ .++||+.+||+++|||++++|+++++++...+++|+.+|++|+
T Consensus 257 N~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~ 336 (347)
T 1mx3_A 257 NTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGR 336 (347)
T ss_dssp ECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999986 4789999999999999999999999999999999999999998
Q ss_pred CCC---Cccc
Q 006864 396 LSA---TAIN 402 (628)
Q Consensus 396 ~~~---~~vn 402 (628)
.+. |+||
T Consensus 337 ~~~~l~~~v~ 346 (347)
T 1mx3_A 337 IPDSLKNCVN 346 (347)
T ss_dssp TTTTCSSBCC
T ss_pred CCcccCCCCC
Confidence 765 5554
No 28
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=9.9e-61 Score=507.35 Aligned_cols=312 Identities=31% Similarity=0.502 Sum_probs=289.1
Q ss_pred CCeEEEeCCCCHhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccH
Q 006864 90 KPTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDL 169 (628)
Q Consensus 90 ~~~vlv~~~l~~~~~~~l~~~~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl 169 (628)
|+|||+++.+.++.++.|++.+++++....+.+++.+.++++|++++++.+++++++++++ |+||+|++.|+|+||||+
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~ 80 (333)
T 2d0i_A 2 RPKVGVLLKMKREALEELKKYADVEIILYPSGEELKGVIGRFDGIIVSPTTKITREVLENA-ERLKVISCHSAGYDNIDL 80 (333)
T ss_dssp CSEEEECSCCCHHHHHHHHTTSEEEECCSCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCH
T ss_pred CcEEEEECCCCHHHHHHHHhcCCEEEeCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhC-CCceEEEECCcccccccH
Confidence 5799999999999999998876766543357888999999999999888788999999988 599999999999999999
Q ss_pred hHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc--ccce----eeecCCeEEEEecChhHHH
Q 006864 170 QAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS--KYVG----VSLVGKTLAVMGFGKVGSE 243 (628)
Q Consensus 170 ~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~--~~~g----~~l~GktiGIIGlG~IG~~ 243 (628)
++|+++||.|+|+||+++.+||||++++||+++|+++++++.+|+|.|.+. .+.| .++.|++|||||+|.||+.
T Consensus 81 ~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~ 160 (333)
T 2d0i_A 81 EEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKA 160 (333)
T ss_dssp HHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHH
T ss_pred HHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHH
Confidence 999999999999999999999999999999999999999999999999641 1346 7999999999999999999
Q ss_pred HHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006864 244 VARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 244 vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 323 (628)
+|++++++||+|++||++...+.+...|+...++++++++||+|++|+|++++|+++++++.++.||+| +|||++||.+
T Consensus 161 vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~ 239 (333)
T 2d0i_A 161 IARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGAL 239 (333)
T ss_dssp HHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGG
T ss_pred HHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcc
Confidence 999999999999999998765555566777779999999999999999999999999999999999999 9999999999
Q ss_pred hcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCC-cEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q 006864 324 IDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHE-NVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAIN 402 (628)
Q Consensus 324 vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~-nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~vn 402 (628)
+|+++|+++|++|+++||++|||+.||++ ++|||++| |||+|||+++.|.|++++++..+++|+.+|++|+.+.+.||
T Consensus 240 vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v~ 318 (333)
T 2d0i_A 240 VDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVPEDLVN 318 (333)
T ss_dssp BCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCCTTBSC
T ss_pred cCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcCccC
Confidence 99999999999999999999999999987 89999999 99999999999999999999999999999999999999998
Q ss_pred CC
Q 006864 403 AP 404 (628)
Q Consensus 403 ~p 404 (628)
..
T Consensus 319 ~~ 320 (333)
T 2d0i_A 319 KE 320 (333)
T ss_dssp TT
T ss_pred HH
Confidence 53
No 29
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=6.7e-60 Score=501.22 Aligned_cols=311 Identities=35% Similarity=0.604 Sum_probs=288.4
Q ss_pred CCeEEEeCCCCHhHHHHhhcCCcEEEecC---CCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006864 90 KPTILVSEKLGEAGLAILRSFGNVECLYD---LSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (628)
Q Consensus 90 ~~~vlv~~~l~~~~~~~l~~~~~v~~~~~---~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~ 166 (628)
|++||+++.+.+..++.|++.+++.+... .+.+++.+.++++|++++++.+++++++++++ |+||||++.|+||||
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~ 80 (334)
T 2dbq_A 2 KPKVFITREIPEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENA-PKLRIVANYAVGYDN 80 (334)
T ss_dssp CCEEEESSCCCHHHHHHHHTTSEEEECCCSSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTT
T ss_pred CcEEEEecCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhC-CCceEEEECCccccc
Confidence 57899999999988998987667765432 46788999999999999987778999999988 599999999999999
Q ss_pred ccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccc----c---cccceeeecCCeEEEEecCh
Q 006864 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWL----R---SKYVGVSLVGKTLAVMGFGK 239 (628)
Q Consensus 167 iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~----~---~~~~g~~l~GktiGIIGlG~ 239 (628)
||+++|+++||.|+|+||+++.+||||++++||++.|+++++++.+++|.|. + ..+.|.++.|++|||||+|.
T Consensus 81 id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~ 160 (334)
T 2dbq_A 81 IDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGR 160 (334)
T ss_dssp BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSH
T ss_pred ccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCH
Confidence 9999999999999999999999999999999999999999999999999996 2 12347899999999999999
Q ss_pred hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 240 VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 240 IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
||+.+|++|+++||+|++||++...+.+...|+...++++++++||+|++|+|++++|+++++++.++.||+|++|||++
T Consensus 161 iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 161 IGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 99999999999999999999987655455667777799999999999999999999999999999999999999999999
Q ss_pred CCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 006864 320 RGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSAT 399 (628)
Q Consensus 320 Rg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~ 399 (628)
||.++|+++|.++|++|+|+||++|||+.|| +.++|||.+||||+|||+|+.|.+++++++..+++|+.+|++|+.+.+
T Consensus 241 rg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~ 319 (334)
T 2dbq_A 241 RGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIPPT 319 (334)
T ss_dssp CGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred CCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 9999999999999999999999999999999 678999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 006864 400 AIN 402 (628)
Q Consensus 400 ~vn 402 (628)
.||
T Consensus 320 ~v~ 322 (334)
T 2dbq_A 320 LVN 322 (334)
T ss_dssp BSC
T ss_pred ccC
Confidence 998
No 30
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=6.2e-60 Score=500.66 Aligned_cols=318 Identities=27% Similarity=0.435 Sum_probs=289.2
Q ss_pred ccCCCCeEEEeCCCCHhHHHHhhcC--CcEEEec---CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEec
Q 006864 86 AVTPKPTILVSEKLGEAGLAILRSF--GNVECLY---DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRA 160 (628)
Q Consensus 86 ~~~~~~~vlv~~~l~~~~~~~l~~~--~~v~~~~---~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~ 160 (628)
.++.|++||+++.+.+..++.|++. .++.... ..+.+++.+.++++|++++++.++++++++++++|+||||++.
T Consensus 4 ~~~~~~~il~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~ 83 (330)
T 2gcg_A 4 RPVRLMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTM 83 (330)
T ss_dssp ---CCEEEEESSCCCHHHHHHHHHCTTEEEEECCSSSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEES
T ss_pred CCCCCCEEEEECCCCHHHHHHHHhcCCceEEEecCCCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEEC
Confidence 3445789999999998889988876 4555432 2467899999999999999877789999999873599999999
Q ss_pred ccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc---ccceeeecCCeEEEEec
Q 006864 161 GVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS---KYVGVSLVGKTLAVMGF 237 (628)
Q Consensus 161 g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~GktiGIIGl 237 (628)
|+||||||+++|+++||.|+|+||+++.+||||++++||++.|+++++++.+++|.|.+. .+.|.++.|++|||||+
T Consensus 84 ~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~ 163 (330)
T 2gcg_A 84 SVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGL 163 (330)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECC
T ss_pred CcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999999999999999742 24578999999999999
Q ss_pred ChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEE
Q 006864 238 GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIV 316 (628)
Q Consensus 238 G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailI 316 (628)
|.||+.+|++++++||+|++||++. ..+.....|+..+++++++++||+|++|+|.+++|+++++++.++.||+|++||
T Consensus 164 G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailI 243 (330)
T 2gcg_A 164 GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFI 243 (330)
T ss_dssp SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEE
Confidence 9999999999999999999999876 344455567766699999999999999999999999999999999999999999
Q ss_pred EcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 006864 317 NVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGEL 396 (628)
Q Consensus 317 N~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~ 396 (628)
|++||+++|+++|.++|++|++.||++|||+.||++.++|||+++||++|||+|+.|.|++++++..+++|+.+|++|++
T Consensus 244 n~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~ 323 (330)
T 2gcg_A 244 NISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEP 323 (330)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred CCCcccC
Q 006864 397 SATAINA 403 (628)
Q Consensus 397 ~~~~vn~ 403 (628)
+.+.||.
T Consensus 324 ~~~~v~~ 330 (330)
T 2gcg_A 324 MPSELKL 330 (330)
T ss_dssp CTTEECC
T ss_pred CCCCCCC
Confidence 9998874
No 31
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=1.8e-60 Score=501.17 Aligned_cols=299 Identities=20% Similarity=0.238 Sum_probs=258.8
Q ss_pred CeEEEeCCCC--HhHHHHhhcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcc
Q 006864 91 PTILVSEKLG--EAGLAILRSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNV 167 (628)
Q Consensus 91 ~~vlv~~~l~--~~~~~~l~~~-~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~i 167 (628)
+||++..+.. +...+.|++. .++++... +.+ ...++|+++++. ++++++++ |+||||++.|+|||||
T Consensus 4 mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~-~~~----~~~~ad~~i~~~---~~~~~l~~--~~Lk~I~~~~aG~d~i 73 (315)
T 3pp8_A 4 MEIIFYHPTFNAAWWVNALEKALPHARVREW-KVG----DNNPADYALVWQ---PPVEMLAG--RRLKAVFVLGAGVDAI 73 (315)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHSTTEEEEEC-CTT----CCSCCSEEEESS---CCHHHHTT--CCCSEEEESSSCCHHH
T ss_pred eEEEEEcCCCchHHHHHHHHHHCCCCEEEec-CCC----CccCcEEEEECC---CCHHHhCC--CCceEEEECCEecccc
Confidence 6788877654 4455666653 46655432 111 356999999864 57999987 5999999999999999
Q ss_pred -c-HhH---HHhcCceEEcCCCCC-hhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhH
Q 006864 168 -D-LQA---ATEFGCLVVNAPIAN-TVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVG 241 (628)
Q Consensus 168 -D-l~a---a~~~GI~V~n~p~~~-~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG 241 (628)
| +++ |.++||.|+|+|+++ +.+||||++++||++.|+++++++.+++|+|.+. .+.+++|||+||||+|+||
T Consensus 74 ~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~--~~~~l~g~tvGIiG~G~IG 151 (315)
T 3pp8_A 74 LSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL--PEYTREEFSVGIMGAGVLG 151 (315)
T ss_dssp HHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC--CCCCSTTCCEEEECCSHHH
T ss_pred cchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC--CCCCcCCCEEEEEeeCHHH
Confidence 7 987 789999999999875 8999999999999999999999999999999864 5789999999999999999
Q ss_pred HHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006864 242 SEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 242 ~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 321 (628)
+.+|++|++|||+|++||++..............++++++++||+|++|+|++++|+++|+++.|++||+|++|||++||
T Consensus 152 ~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG 231 (315)
T 3pp8_A 152 AKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARG 231 (315)
T ss_dssp HHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred HHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCC
Confidence 99999999999999999987532110000011247999999999999999999999999999999999999999999999
Q ss_pred chhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Q 006864 322 GVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAI 401 (628)
Q Consensus 322 ~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~v 401 (628)
+++|++||+++|++|+|+||+||||++||++.++|||++|||++|||+|++|.+ +++...+++||.+|++|+++.|.|
T Consensus 232 ~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~~~~~~V 309 (315)
T 3pp8_A 232 VHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGEPVTGQV 309 (315)
T ss_dssp GGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTCCCCCBC
T ss_pred hhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCCCCCceE
Confidence 999999999999999999999999999999999999999999999999999986 578999999999999999999999
Q ss_pred cC
Q 006864 402 NA 403 (628)
Q Consensus 402 n~ 403 (628)
|.
T Consensus 310 ~~ 311 (315)
T 3pp8_A 310 DR 311 (315)
T ss_dssp CC
T ss_pred Cc
Confidence 85
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=6.5e-59 Score=487.26 Aligned_cols=292 Identities=22% Similarity=0.270 Sum_probs=265.7
Q ss_pred eEEEeCCCCHhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccHhH
Q 006864 92 TILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQA 171 (628)
Q Consensus 92 ~vlv~~~l~~~~~~~l~~~~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl~a 171 (628)
|||++++++++.++.|++.+ .++. .+.+.++|+++++. .+.++++++ |+||||+++|+||||||+++
T Consensus 2 ~il~~~~~~~~~~~~l~~~~-~~v~--------~~~~~~~d~~i~~~---~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~ 68 (303)
T 1qp8_A 2 ELYVNFELPPEAEEELRKYF-KIVR--------GGDLGNVEAALVSR---ITAEELAKM-PRLKFIQVVTAGLDHLPWES 68 (303)
T ss_dssp EEECCSCCCHHHHHHHHTTC-EEEC--------SSCCTTBCCCCBSC---CCHHHHHHC-TTCCCEEBSSSCCTTSCCTT
T ss_pred EEEEccCCCHHHHHHHHhcC-Cccc--------hhhhCCCEEEEECC---CCHHHHhhC-CCCcEEEECCcCcccccHHH
Confidence 78999999999999888752 2221 25678999999864 457999988 59999999999999999998
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcC
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGL 251 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~ 251 (628)
+ ++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.+. ..+.++.|||+||||+|+||+.+|++|++|
T Consensus 69 ~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~-~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 146 (303)
T 1qp8_A 69 I-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRD-VEIPLIQGEKVAVLGLGEIGTRVGKILAAL 146 (303)
T ss_dssp S-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-SCCCCCTTCEEEEESCSTHHHHHHHHHHHT
T ss_pred H-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCC-CCCCCCCCCEEEEEccCHHHHHHHHHHHHC
Confidence 5 79999999999999999999999999999999999999999999753 234589999999999999999999999999
Q ss_pred CCEEEEECCCCChhHHHHcCC-cccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHH
Q 006864 252 GMNVIAHDPYAPADKARAVGV-ELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALV 330 (628)
Q Consensus 252 G~~V~~~d~~~~~~~a~~~g~-~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~ 330 (628)
||+|++||++.. +. +. ...++++++++||+|++|+|++++|+++++++.|++||+|++|||++||+++|+++|+
T Consensus 147 G~~V~~~dr~~~-~~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~ 221 (303)
T 1qp8_A 147 GAQVRGFSRTPK-EG----PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVL 221 (303)
T ss_dssp TCEEEEECSSCC-CS----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHH
T ss_pred CCEEEEECCCcc-cc----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHH
Confidence 999999998765 21 33 3458999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeeEEEeecc-CCCCCCCCCccccCCcEEEcCCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q 006864 331 RALDSGVVAQAALDVF-TEEPPAKDSKLVQHENVTVTPHLGAS--TKEAQEGVAIEIAEAVVGALRGELSATAINA 403 (628)
Q Consensus 331 ~aL~~g~i~ga~lDV~-~~EP~~~~~~L~~~~nvilTPHig~~--T~ea~~~~~~~~~~~i~~~l~g~~~~~~vn~ 403 (628)
++|++|+|+||++||| ++||+++++|||++||+++|||++++ |.|++++++..+++|+.+|++|+++.+.||.
T Consensus 222 ~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~~ 297 (303)
T 1qp8_A 222 RILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGGRPRNIAKR 297 (303)
T ss_dssp HHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTSCCSCBCCG
T ss_pred HHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceeCH
Confidence 9999999999999999 88999889999999999999999998 9999999999999999999999999999884
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=2.5e-57 Score=486.17 Aligned_cols=281 Identities=28% Similarity=0.422 Sum_probs=250.9
Q ss_pred CCCeEEEeCCCCHhHHHHhhcCCcEEEecC--CCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006864 89 PKPTILVSEKLGEAGLAILRSFGNVECLYD--LSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (628)
Q Consensus 89 ~~~~vlv~~~l~~~~~~~l~~~~~v~~~~~--~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~ 166 (628)
.|+|||+.+.++ ...+.+++.+++.+... ++. +.++++|++++++.+++++++++ ++ +||||+++|+|+||
T Consensus 2 ~mmkIl~~~~~p-~~~~~~~~~~~v~~~~~~~~~~----~~l~~ad~li~~~~~~v~~~ll~-~~-~Lk~I~~~~~G~D~ 74 (381)
T 3oet_A 2 NAMKILVDENMP-YARELFSRLGEVKAVPGRPIPV----EELNHADALMVRSVTKVNESLLS-GT-PINFVGTATAGTDH 74 (381)
T ss_dssp CCCEEEEETTST-THHHHHTTSSEEEEECC---CH----HHHTTCSEEEECTTSCBSHHHHT-TS-CCCEEEESSSCCTT
T ss_pred CceEEEECCCCc-HHHHHHhhCCcEEEeCCCCCCH----HHHCCCEEEEECCCCCCCHHHHc-CC-CCEEEEEccccccc
Confidence 357999998875 46788888888776532 233 34789999999988899999998 43 69999999999999
Q ss_pred ccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHH
Q 006864 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVAR 246 (628)
Q Consensus 167 iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~ 246 (628)
||+++|+++||.|+|+||+|+.+||||++++||+++|+. |.+++|||+||||+|+||+.+|+
T Consensus 75 iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~------------------g~~l~gktvGIIGlG~IG~~vA~ 136 (381)
T 3oet_A 75 VDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD------------------GFSLRDRTIGIVGVGNVGSRLQT 136 (381)
T ss_dssp BCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT------------------TCCGGGCEEEEECCSHHHHHHHH
T ss_pred cCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc------------------CCccCCCEEEEEeECHHHHHHHH
Confidence 999999999999999999999999999999999999863 46899999999999999999999
Q ss_pred HHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCcc----ccccccHHHHhcCCCCcEEEEcCCCc
Q 006864 247 RAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPT----TSKIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 247 ~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~----t~~li~~~~l~~mk~gailIN~aRg~ 322 (628)
+|++|||+|++|||+.. ....+....++++++++||+|++|+|++++ |+++++++.|++||+|++|||++||+
T Consensus 137 ~l~a~G~~V~~~d~~~~---~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~ 213 (381)
T 3oet_A 137 RLEALGIRTLLCDPPRA---ARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGP 213 (381)
T ss_dssp HHHHTTCEEEEECHHHH---HTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHCCCEEEEECCChH---HhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCc
Confidence 99999999999998531 112345677999999999999999999999 99999999999999999999999999
Q ss_pred hhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 006864 323 VIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSAT 399 (628)
Q Consensus 323 ~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~ 399 (628)
++|++||+++|++|+++||+||||++||++ +++||.++ +++|||+||+|.|++.++..++++|+.+|+++.....
T Consensus 214 vvde~aL~~aL~~g~i~gA~LDV~e~EP~~-~~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~~~~ 288 (381)
T 3oet_A 214 VVDNAALLARLNAGQPLSVVLDVWEGEPDL-NVALLEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQRVA 288 (381)
T ss_dssp GBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred ccCHHHHHHHHHhCCCeEEEeeccccCCCC-cchhhhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 999999999999999999999999999986 56798875 8999999999999999999999999999998865433
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.4e-56 Score=466.25 Aligned_cols=278 Identities=26% Similarity=0.363 Sum_probs=240.9
Q ss_pred eEEEeCCCC----HhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcc
Q 006864 92 TILVSEKLG----EAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNV 167 (628)
Q Consensus 92 ~vlv~~~l~----~~~~~~l~~~~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~i 167 (628)
+|++..++. +.+.+.|+.+. ++. .+.++++|++|++ ..++ ++ |+||||+++|+|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~---------~~~~~~ad~li~~-~~~~------~~-~~Lk~I~~~~~G~d~i 63 (290)
T 3gvx_A 2 DVYVNFPADGHVREIAKTVLDGFD-LHW---------YPDYYDAEAQVIK-DRYV------LG-KRTKMIQAISAGVDHI 63 (290)
T ss_dssp CEEECSCCCHHHHHHHHHHTTTSC-EEE---------TTSCCCCSEEEES-SCCC------CC-SSCCEEEECSSCCTTS
T ss_pred ceEEecCCcchHHHHHHHHhcccc-ccc---------Ccchhhhhhhhhh-hhhh------hh-hhhHHHHHHhcCCcee
Confidence 455566654 44455555432 222 1678999999983 4443 45 6999999999999999
Q ss_pred cHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHH
Q 006864 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARR 247 (628)
Q Consensus 168 Dl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~ 247 (628)
|+++|+++||.+.| ++.|+.+||||++++||++.|+++.+++.+++|+|.+.. ..+++|||+||||+|.||+.+|++
T Consensus 64 d~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~--~~~l~g~tvGIIGlG~IG~~vA~~ 140 (290)
T 3gvx_A 64 DVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSP--TTLLYGKALGILGYGGIGRRVAHL 140 (290)
T ss_dssp CGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC--CCCCTTCEEEEECCSHHHHHHHHH
T ss_pred ecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCC--ceeeecchheeeccCchhHHHHHH
Confidence 99999987765555 689999999999999999999999999999999998753 378999999999999999999999
Q ss_pred HHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcH
Q 006864 248 AKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDE 326 (628)
Q Consensus 248 l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde 326 (628)
|++|||+|++||++..... .+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++|+
T Consensus 141 l~~~G~~V~~~dr~~~~~~----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 216 (290)
T 3gvx_A 141 AKAFGMRVIAYTRSSVDQN----VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSK 216 (290)
T ss_dssp HHHHTCEEEEECSSCCCTT----CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCH
T ss_pred HHhhCcEEEEEeccccccc----cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCC
Confidence 9999999999999863321 13444 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 006864 327 EALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLG-ASTKEAQEGVAIEIAEAVVGALRGELS 397 (628)
Q Consensus 327 ~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig-~~T~ea~~~~~~~~~~~i~~~l~g~~~ 397 (628)
++|+++|++|++.||++|||+.||+ +|||++||+++|||+| ++|.|+++++...+++||.+|++|+.-
T Consensus 217 ~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~~ 285 (290)
T 3gvx_A 217 PDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEGH 285 (290)
T ss_dssp HHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC----
T ss_pred cchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCCc
Confidence 9999999999999999999999997 8999999999999999 999999999999999999999999864
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.6e-54 Score=465.37 Aligned_cols=282 Identities=31% Similarity=0.441 Sum_probs=249.3
Q ss_pred eEEEeCCCCHhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccHhH
Q 006864 92 TILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQA 171 (628)
Q Consensus 92 ~vlv~~~l~~~~~~~l~~~~~v~~~~~~~~~el~~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl~a 171 (628)
||++.+.++. ..+.+++.+++.+... .+...+.+.++|++++++.+++++++++ + ++||+|+++|+|+||||+++
T Consensus 2 kil~~~~~~~-~~~~~~~~~~v~~~~~--~~~~~~~l~~ad~li~~~~~~~~~~~l~-~-~~Lk~I~~~~~G~D~iD~~~ 76 (380)
T 2o4c_A 2 RILADENIPV-VDAFFADQGSIRRLPG--RAIDRAALAEVDVLLVRSVTEVSRAALA-G-SPVRFVGTCTIGTDHLDLDY 76 (380)
T ss_dssp EEEEETTCTT-HHHHHGGGSEEEEECG--GGCSTTTTTTCSEEEECTTSCBCHHHHT-T-SCCCEEEECSSCSTTBCHHH
T ss_pred EEEEecCchH-HHHHHHhCCcEEEecC--CcCChHHHCCcEEEEEcCCCCCCHHHhc-C-CCceEEEEcCcccchhhHHH
Confidence 7888877654 4677777677655331 1112234689999999988899999998 6 59999999999999999999
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcC
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGL 251 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~ 251 (628)
|+++||.|+|+||+|+.+||||++++||++.|++ |.+++||||||||+|+||+.+|++|++|
T Consensus 77 ~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~------------------~~~l~g~tvGIIGlG~IG~~vA~~l~~~ 138 (380)
T 2o4c_A 77 FAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR------------------GADLAERTYGVVGAGQVGGRLVEVLRGL 138 (380)
T ss_dssp HHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH------------------TCCGGGCEEEEECCSHHHHHHHHHHHHT
T ss_pred HHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh------------------hcccCCCEEEEEeCCHHHHHHHHHHHHC
Confidence 9999999999999999999999999999999962 3589999999999999999999999999
Q ss_pred CCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCcc----ccccccHHHHhcCCCCcEEEEcCCCchhcHH
Q 006864 252 GMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPT----TSKIFNDETFAKMKKGVRIVNVARGGVIDEE 327 (628)
Q Consensus 252 G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~----t~~li~~~~l~~mk~gailIN~aRg~~vde~ 327 (628)
||+|++|||+... ...+....++++++++||+|++|+|++++ |+++++++.|++||+|++|||++||+++|++
T Consensus 139 G~~V~~~d~~~~~---~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~ 215 (380)
T 2o4c_A 139 GWKVLVCDPPRQA---REPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQ 215 (380)
T ss_dssp TCEEEEECHHHHH---HSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHH
T ss_pred CCEEEEEcCChhh---hccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHH
Confidence 9999999986321 12455667999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Q 006864 328 ALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAI 401 (628)
Q Consensus 328 aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~v 401 (628)
+|+++|++|+|.||+||||++||++ +++|+. +|+++|||+|++|.|++.++...+++|+.+|++|+...+.-
T Consensus 216 aL~~aL~~g~i~~A~LDV~~~EP~~-~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~~~~~ 287 (380)
T 2o4c_A 216 ALRRLLEGGADLEVALDVWEGEPQA-DPELAA-RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERVSLQ 287 (380)
T ss_dssp HHHHHHHTTCCEEEEESCCTTTTSC-CHHHHT-TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCCCCGG
T ss_pred HHHHHHHhCCCceEEeeeeccCCCC-chhhcc-CCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcCCCccchh
Confidence 9999999999999999999999974 678887 59999999999999999999999999999999998755443
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=1.4e-39 Score=357.79 Aligned_cols=275 Identities=17% Similarity=0.180 Sum_probs=234.6
Q ss_pred CcceeEE-ecccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCC
Q 006864 152 GKLKVVG-RAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (628)
Q Consensus 152 ~~Lk~I~-~~g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~Gk 230 (628)
++++.|+ .+++|+|++ ++|+++||.|+|+|++|. ++|| +++|++....+.++.| |.+ +.+.++.||
T Consensus 192 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r--~~~~~l~Gk 258 (479)
T 1v8b_A 192 KKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR--ATDFLISGK 258 (479)
T ss_dssp TTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH--HHCCCCTTS
T ss_pred cCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh--ccccccCCC
Confidence 4899998 889999998 899999999999999999 9999 4578999899999988 975 467899999
Q ss_pred eEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcC
Q 006864 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~m 309 (628)
|+||||+|.||+.+|++|++|||+|++||++... ..+...|+...++++++++||+|++|+ +|+++|+++.|++|
T Consensus 259 tVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~M 334 (479)
T 1v8b_A 259 IVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVIKLEHLLKM 334 (479)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSBCHHHHTTC
T ss_pred EEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----ChhhhcCHHHHhhc
Confidence 9999999999999999999999999999998643 245566887789999999999999995 68999999999999
Q ss_pred CCCcEEEEcCCCch-hcHHHHHH--HHhCCCeeEEEeeccCCCCCCCCCccccC--CcEEEcCCCC-CCcHH-HHHHHHH
Q 006864 310 KKGVRIVNVARGGV-IDEEALVR--ALDSGVVAQAALDVFTEEPPAKDSKLVQH--ENVTVTPHLG-ASTKE-AQEGVAI 382 (628)
Q Consensus 310 k~gailIN~aRg~~-vde~aL~~--aL~~g~i~ga~lDV~~~EP~~~~~~L~~~--~nvilTPHig-~~T~e-a~~~~~~ 382 (628)
|+|++|||++||++ ||+++|.+ +|++|+|+ +++||| |++.++|||.+ ||+++| |+| +++.+ ++.+++.
T Consensus 335 K~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~ 409 (479)
T 1v8b_A 335 KNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPNGNKIIVLARGRLLNL-GCATGHPAFVMSFSFCN 409 (479)
T ss_dssp CTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCCCCeeeEecCCCEEEE-eccCCCCchhHHHHHHH
Confidence 99999999999999 99999999 99999998 999998 44457899988 999999 999 67766 7889999
Q ss_pred HHHHHHHHHHcCC--CCCCcccCCCCCcccccccccHHHHHHHHhHHHHHHhcCCCCceEEEEEEeecCCCCCC
Q 006864 383 EIAEAVVGALRGE--LSATAINAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDL 454 (628)
Q Consensus 383 ~~~~~i~~~l~g~--~~~~~vn~p~~~~~~~~~~~p~~~lAerlG~la~qL~~g~~~~~~v~i~~~Gs~a~~~~ 454 (628)
.+++|+..|++|+ .+.|.|+. ++....+++.+ +.| +++|....||..+ ..+.+.|.+.|.+.+..|
T Consensus 410 ~~~~ni~~~~~g~~~~l~n~V~~--lp~~~de~va~-l~L-~~lG~~l~~lt~~--q~~yi~v~~~g~~~~~~~ 477 (479)
T 1v8b_A 410 QTFAQLDLWQNKDTNKYENKVYL--LPKHLDEKVAL-YHL-KKLNASLTELDDN--QCQFLGVNKSGPFKSNEY 477 (479)
T ss_dssp HHHHHHHHHHTTTSSSCCSSEEC--CCHHHHHHHHH-HHH-GGGTCCCCCCCHH--HHHHHTCCTTSCCSCTTC
T ss_pred HHHHHHHHHHcCCCCcCCcceEe--CChhhHHHHHH-HHH-HHcCChHhhcChh--hhhhEeeeeCCCCCcccC
Confidence 9999999999999 88887762 33444444555 456 7777777777665 566677778887764444
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=7.1e-40 Score=361.35 Aligned_cols=274 Identities=17% Similarity=0.209 Sum_probs=231.0
Q ss_pred CcceeEE-ecccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCC
Q 006864 152 GKLKVVG-RAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (628)
Q Consensus 152 ~~Lk~I~-~~g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~Gk 230 (628)
+++|.|+ .+++|+|++ ++|+++||.|+|+|++|. +|||+ ++|++....+.++.| |.+ ..|.++.||
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g-w~~--~~g~~L~Gk 278 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG-IKR--ATDVMIAGK 278 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH-HHH--HHCCCCTTC
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh-hhh--ccccccCCC
Confidence 4899998 889999998 899999999999999999 99994 458888887788877 865 467899999
Q ss_pred eEEEEecChhHHHHHHHHHcCCCEEEEECCCCChh-HHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcC
Q 006864 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPAD-KARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~m 309 (628)
|+||||+|+||+.+|++|++|||+|++||++.... .+...|+...++++++++||+|++|+ +|+++|+++.|++|
T Consensus 279 tVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~M 354 (494)
T 3d64_A 279 IAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVINHDHMKAM 354 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSBCHHHHHHC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----CcccccCHHHHhhC
Confidence 99999999999999999999999999999986432 34456788889999999999999997 68999999999999
Q ss_pred CCCcEEEEcCCCch-hcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccC--CcEEEcCCCC-CCcHH-HHHHHHHHH
Q 006864 310 KKGVRIVNVARGGV-IDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQH--ENVTVTPHLG-ASTKE-AQEGVAIEI 384 (628)
Q Consensus 310 k~gailIN~aRg~~-vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~--~nvilTPHig-~~T~e-a~~~~~~~~ 384 (628)
|+|++|||++||++ ||+++| ++|++|+|+ +++|+ +|++.++|||.+ ||+++| |+| +++.+ ++.+++..+
T Consensus 355 K~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~~~ 428 (494)
T 3d64_A 355 RHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNSFTNQT 428 (494)
T ss_dssp CTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHHHHHHH
T ss_pred CCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHHHHHHH
Confidence 99999999999999 699999 999999997 55555 577778999998 999999 999 66754 888999999
Q ss_pred HHHHHHHHcCCCCCCcccCCCCCcccccccccHHHHHHHHhHHHHHHhcCCCCceEEEEEEeecCCCCCC
Q 006864 385 AEAVVGALRGELSATAINAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDL 454 (628)
Q Consensus 385 ~~~i~~~l~g~~~~~~vn~p~~~~~~~~~~~p~~~lAerlG~la~qL~~g~~~~~~v~i~~~Gs~a~~~~ 454 (628)
++|+..|++|+.+.+.|+. ++.+.-+++.+ +.| +++|....||..+ ..+.+.|.+.|.+.+..|
T Consensus 429 ~~ni~~~~~g~~~~n~V~~--lp~~~d~~va~-l~L-~~~g~~~~~l~~~--q~~y~~v~~~g~~~~~~~ 492 (494)
T 3d64_A 429 LAQIELFTRGGEYANKVYV--LPKHLDEKVAR-LHL-ARIGAQLSELSDD--QAAYIGVSKAGPFKPDHY 492 (494)
T ss_dssp HHHHHHHHHGGGSCSSEEE--CCHHHHHHHHH-HHH-TTTTCCCCCCCHH--HHHHHTCCTTSCCSCTTC
T ss_pred HHHHHHHHcCCCCCCceee--CChhHHHHHHH-HHH-HHcCChHHhhChh--hHHhEeeccCCCCCcccC
Confidence 9999999999999999862 23343334544 667 7778777777766 566677778888774444
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.95 E-value=2.1e-28 Score=254.56 Aligned_cols=206 Identities=20% Similarity=0.226 Sum_probs=167.3
Q ss_pred CCCCeEEEeCC--CCHhHHHHhhcCC-cEEEecC----------CCHhHHHhhcCCCeEEEEc----------------C
Q 006864 88 TPKPTILVSEK--LGEAGLAILRSFG-NVECLYD----------LSPEALCEKISQCDALIVR----------------S 138 (628)
Q Consensus 88 ~~~~~vlv~~~--l~~~~~~~l~~~~-~v~~~~~----------~~~~el~~~~~~~d~liv~----------------~ 138 (628)
|.+++|++... ...+..+.|.+.+ ++..... ...+++.+.++++|+++++ .
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccccC
Confidence 44567888753 3345566676654 6654321 0125667778899999985 2
Q ss_pred CCCCCHHHHHhcCCcceeEEecccccCcccH-hHHHhcCceEEcCC------CCChhhHHHHHHHHHHHHHHchhHHHHH
Q 006864 139 GTKVTRSVFEAANGKLKVVGRAGVGIDNVDL-QAATEFGCLVVNAP------IANTVAAAEHGIALLASMARNVSQADAS 211 (628)
Q Consensus 139 ~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl-~aa~~~GI~V~n~p------~~~~~avAE~~l~l~L~~~R~i~~~~~~ 211 (628)
.+++++++++++ |+||+|+ +|+||+|+ ++|+++||.|+|+| ++|+.+|||++++++|..
T Consensus 83 ~~~~~~~~l~~~-~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~---------- 148 (293)
T 3d4o_A 83 SIVLTEEMIEKT-PNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH---------- 148 (293)
T ss_dssp CCBCCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred CccchHHHHHhC-CCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh----------
Confidence 346899999988 5899997 89999998 89999999999998 899999999999998852
Q ss_pred HHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCcc---cCHHHHhccCCEE
Q 006864 212 IKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVEL---VSFDQALATADFI 287 (628)
Q Consensus 212 ~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~---~sl~ell~~aDvV 287 (628)
.+.++.|+|+||||+|.||+.+|++|++|||+|++||++... +.+.+.|+.. .++++++++||+|
T Consensus 149 -----------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvV 217 (293)
T 3d4o_A 149 -----------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVC 217 (293)
T ss_dssp -----------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEE
T ss_pred -----------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEE
Confidence 256799999999999999999999999999999999998532 3344567654 3789999999999
Q ss_pred EEcCCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006864 288 SLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 288 ~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 323 (628)
++|+|+ ++++++.|+.||+++++||++||..
T Consensus 218 i~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 218 INTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred EECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 999995 7889999999999999999999754
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.94 E-value=5.3e-29 Score=275.47 Aligned_cols=273 Identities=18% Similarity=0.180 Sum_probs=218.4
Q ss_pred cceeE-EecccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCe
Q 006864 153 KLKVV-GRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKT 231 (628)
Q Consensus 153 ~Lk~I-~~~g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~Gkt 231 (628)
+++-| ...|+|||++ .++.++||.++|++++|. ++||+ ++|++....+.+..+ |.+ ..+..+.|++
T Consensus 210 ~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g-~~r--~~~~~l~Gkt 276 (494)
T 3ce6_A 210 SVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG-INR--GTDALIGGKK 276 (494)
T ss_dssp HCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH-HHH--HHCCCCTTCE
T ss_pred CeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH-HHh--ccCCCCCcCE
Confidence 45545 4789999998 788999999999999999 99994 346666665555555 654 2355789999
Q ss_pred EEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCC
Q 006864 232 LAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMK 310 (628)
Q Consensus 232 iGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk 310 (628)
++|+|+|.||+.+|++++++|++|+++|++... +.+.+.|+...+++++++++|+|+.|++ +.++++.+.|+.||
T Consensus 277 V~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~~mk 352 (494)
T 3ce6_A 277 VLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATG----NKDIIMLEHIKAMK 352 (494)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSS----SSCSBCHHHHHHSC
T ss_pred EEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCC----CHHHHHHHHHHhcC
Confidence 999999999999999999999999999998633 4567788887899999999999999975 56788989999999
Q ss_pred CCcEEEEcCCCch-hcHHHHHH-HHhCCCeeEEEeeccCCCCCCCCCc--cccCCcEE----EcCCCCCCcHHHHHHHHH
Q 006864 311 KGVRIVNVARGGV-IDEEALVR-ALDSGVVAQAALDVFTEEPPAKDSK--LVQHENVT----VTPHLGASTKEAQEGVAI 382 (628)
Q Consensus 311 ~gailIN~aRg~~-vde~aL~~-aL~~g~i~ga~lDV~~~EP~~~~~~--L~~~~nvi----lTPHig~~T~ea~~~~~~ 382 (628)
+|++++|++|++. +|+++|.+ +|++++|. +++|+|+.++. +++ |+..+|++ +|||+++.+.+++ ..
T Consensus 353 ~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~--~~~l~LL~~grlvnL~~~TPH~a~~~~~s~---~~ 426 (494)
T 3ce6_A 353 DHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT--GRSIIVLSEGRLLNLGNATGHPSFVMSNSF---AN 426 (494)
T ss_dssp TTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT--CCEEEEEGGGSCHHHHHSCCSCHHHHHHHH---HH
T ss_pred CCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc--chHHHHHhCCCEEeccCCCCCccccchHHH---HH
Confidence 9999999999999 99999998 88888886 67899876432 344 67788998 9999999888764 67
Q ss_pred HHHHHHHHHHcCCCCCCcccCCCCCcccccccccHHHHHHHHhHHHHHHhcCCCCceEEEEEEeecCCCCCC
Q 006864 383 EIAEAVVGALRGELSATAINAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDL 454 (628)
Q Consensus 383 ~~~~~i~~~l~g~~~~~~vn~p~~~~~~~~~~~p~~~lAerlG~la~qL~~g~~~~~~v~i~~~Gs~a~~~~ 454 (628)
++.+++..+++|+...+.| .+.++.+|+...+++| .++|....+|..+ ..+-+.+.+.|.|.+..|
T Consensus 427 qa~~ai~~~~~g~~~~~~V---~~~P~~~De~vA~lhL-~~lg~~l~~lt~~--q~~y~~v~~~G~~k~~~~ 492 (494)
T 3ce6_A 427 QTIAQIELWTKNDEYDNEV---YRLPKHLDEKVARIHV-EALGGHLTKLTKE--QAEYLGVDVEGPYKPDHY 492 (494)
T ss_dssp HHHHHHHHHHTGGGCCSSE---ECCCHHHHHHHHHHHH-HHHTCCCCCCCHH--HHHHHTCCTTSCCSCTTC
T ss_pred HHHHHHHHHHcCCCCCCEE---EECHHHHHHHHHHhhH-HHHHHHHHHhChh--HHHHcccccCCCCCcccC
Confidence 8899999999988777776 3457778776666777 6667666666655 445556667777764443
No 40
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.93 E-value=3.9e-26 Score=238.11 Aligned_cols=210 Identities=16% Similarity=0.188 Sum_probs=162.4
Q ss_pred CCCCeEEEeCC--CCHhHHHHhhcCC-cEEEecCCCH-----------hHHHhhcCCCeEEEE----cC----------C
Q 006864 88 TPKPTILVSEK--LGEAGLAILRSFG-NVECLYDLSP-----------EALCEKISQCDALIV----RS----------G 139 (628)
Q Consensus 88 ~~~~~vlv~~~--l~~~~~~~l~~~~-~v~~~~~~~~-----------~el~~~~~~~d~liv----~~----------~ 139 (628)
|+.+||++... ......+.|.+.+ ++... .++. +++.+.++++|++++ .. .
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~-~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~ 83 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLV-GFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSN 83 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEE-SCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEE-eccccccccccceeccchHHHHhcCCEEEeccccccCCccccccccc
Confidence 44568888854 3345566676654 55543 2222 235667889999997 21 3
Q ss_pred CC--CCHHHHHhcCCcceeEEecccccCccc-HhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCc
Q 006864 140 TK--VTRSVFEAANGKLKVVGRAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGK 216 (628)
Q Consensus 140 ~~--v~~~~l~~~~~~Lk~I~~~g~G~D~iD-l~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~ 216 (628)
.+ +++++++++ ++||+|+ +|+||+| +++|+++||.|+|+|++++ + ++.|+++.+ +|.
T Consensus 84 ~~~~~~~~~l~~~-~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~~--v---------~~~r~~~~~-----~g~ 143 (300)
T 2rir_A 84 EEVVLKQDHLDRT-PAHCVIF---SGISNAYLENIAAQAKRKLVKLFERDD--I---------AIYNSIPTV-----EGT 143 (300)
T ss_dssp SCEECCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSHH--H---------HHHHHHHHH-----HHH
T ss_pred CCccchHHHHhhc-CCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCCc--e---------EEEcCccHH-----HHH
Confidence 56 899999988 4899998 8999999 9999999999999999853 2 345666554 456
Q ss_pred cccc-ccceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCc---ccCHHHHhccCCEEEEcC
Q 006864 217 WLRS-KYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVE---LVSFDQALATADFISLHM 291 (628)
Q Consensus 217 W~~~-~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~---~~sl~ell~~aDvV~l~~ 291 (628)
|... ...+.++.|+|+||||+|.||+.+|++|++|||+|++||++... +...+.|+. ..++++++++||+|++|+
T Consensus 144 ~~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~ 223 (300)
T 2rir_A 144 IMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTI 223 (300)
T ss_dssp HHHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECC
T ss_pred HHHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECC
Confidence 7532 23578999999999999999999999999999999999997532 223345664 247999999999999999
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006864 292 PLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 292 Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 323 (628)
|+ ++++++.|+.||+|+++||++||+.
T Consensus 224 p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 224 PS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp SS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred Ch-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 96 6889999999999999999999854
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.91 E-value=2.5e-23 Score=223.91 Aligned_cols=245 Identities=18% Similarity=0.220 Sum_probs=182.7
Q ss_pred CCHhHHHHhhcCC-cEEEe------cCCCHhHHH-----------hhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEec
Q 006864 99 LGEAGLAILRSFG-NVECL------YDLSPEALC-----------EKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRA 160 (628)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~------~~~~~~el~-----------~~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~ 160 (628)
+.|+..+.|.+.+ +|.+. ..+++++.. +.+.++|+| +....++++++.... ++..+++..
T Consensus 18 ltP~~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii-~~vk~p~~~e~~~l~-~~~~l~~~~ 95 (377)
T 2vhw_A 18 ITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLL-LKVKEPIAAEYGRLR-HGQILFTFL 95 (377)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEE-ECSSCCCGGGGGGCC-TTCEEEECC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEE-EEeCCCChHHHhhcC-CCCEEEEEe
Confidence 5567777776554 55442 244555554 234568976 455556666666544 578888888
Q ss_pred ccccCcccHhHHHhcCceEE----------cCCCCChhhHHHHHHHHHHHHH-HchhHHHHHHHcCcccccccceeeecC
Q 006864 161 GVGIDNVDLQAATEFGCLVV----------NAPIANTVAAAEHGIALLASMA-RNVSQADASIKAGKWLRSKYVGVSLVG 229 (628)
Q Consensus 161 g~G~D~iDl~aa~~~GI~V~----------n~p~~~~~avAE~~l~l~L~~~-R~i~~~~~~~~~g~W~~~~~~g~~l~G 229 (628)
..++|..+++++.++||.++ |.|.+++. ||++..+++.+. |++. ..+.|+|..... ..++.|
T Consensus 96 ~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s~~--ae~ag~~a~~~a~r~l~----~~~~g~~~~~~~-~~~l~g 168 (377)
T 2vhw_A 96 HLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPM--SEVAGRLAAQVGAYHLM----RTQGGRGVLMGG-VPGVEP 168 (377)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHH--HHHHHHHHHHHHHHHTS----GGGTSCCCCTTC-BTTBCC
T ss_pred cccCCHHHHHHHHHcCCeEEEeeeccccCCCccccCch--HHHHHHHHHHHHHHHHH----HhcCCCcccccC-CCCCCC
Confidence 88999999999999999997 67776654 499985554444 7773 344555432111 136899
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-cCCc-------ccCHHHHhccCCEEEEcC--CCCcccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-VGVE-------LVSFDQALATADFISLHM--PLNPTTS 298 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-~g~~-------~~sl~ell~~aDvV~l~~--Plt~~t~ 298 (628)
++++|+|+|.||+.+|++++++|++|+++|++... +.+.+ .|.. ..+++++++++|+|+.++ |.+ ++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~ 247 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAP 247 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCc
Confidence 99999999999999999999999999999987532 23333 4543 236788899999999966 655 789
Q ss_pred ccccHHHHhcCCCCcEEEEcC--CCchhcHHHHHHHHhCCCeeEEEeeccCC-CCCCCCCccccCCcEE--EcCCCCCCc
Q 006864 299 KIFNDETFAKMKKGVRIVNVA--RGGVIDEEALVRALDSGVVAQAALDVFTE-EPPAKDSKLVQHENVT--VTPHLGAST 373 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~a--Rg~~vde~aL~~aL~~g~i~ga~lDV~~~-EP~~~~~~L~~~~nvi--lTPHig~~T 373 (628)
++++++.++.||+|++|||++ +|+ ||+. ||.+.++|+|..+|++ +|||+++.+
T Consensus 248 ~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~ 305 (377)
T 2vhw_A 248 KLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYCVANMPASV 305 (377)
T ss_dssp CCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEECBTTGGGGS
T ss_pred ceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEecCCcchhh
Confidence 999999999999999999998 332 6887 8887789999999998 999999998
Q ss_pred HH
Q 006864 374 KE 375 (628)
Q Consensus 374 ~e 375 (628)
..
T Consensus 306 ~~ 307 (377)
T 2vhw_A 306 PK 307 (377)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.81 E-value=2e-19 Score=192.86 Aligned_cols=277 Identities=17% Similarity=0.199 Sum_probs=179.8
Q ss_pred CCHhHHHHhhcCC-cEEEe------cCCCHhHHHh----------hcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecc
Q 006864 99 LGEAGLAILRSFG-NVECL------YDLSPEALCE----------KISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAG 161 (628)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~------~~~~~~el~~----------~~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g 161 (628)
+.|+..+.|.+.+ +|.+. ..+++++..+ .+ ++|+|+ ....++.++ ++.+++++++|+...
T Consensus 18 l~P~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il-~vk~p~~~~-~~~l~~~~~~~~~~~ 94 (369)
T 2eez_A 18 LTPGGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVV-KVKEPLPEE-YGFLREGLILFTYLH 94 (369)
T ss_dssp SCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEE-CSSCCCGGG-GGGCCTTCEEEECCC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEE-EECCCCHHH-HhhcCCCcEEEEEec
Confidence 5677777776654 55442 3456666554 45 899876 444455444 666656899999999
Q ss_pred cccCcccHhHHHhcCceEE---cCCCC-Ch----hhHHHHHH--HHHHHHHHchhHHHHHHHcCcccccccceeeecCCe
Q 006864 162 VGIDNVDLQAATEFGCLVV---NAPIA-NT----VAAAEHGI--ALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKT 231 (628)
Q Consensus 162 ~G~D~iDl~aa~~~GI~V~---n~p~~-~~----~avAE~~l--~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~Gkt 231 (628)
.+.|+.+++++.++||.+. +.+.. .. .++++.+- +.++++ +.+..... ..+.|... ..++.|++
T Consensus 95 ~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~-~~l~~~~~--g~~~~~~~---~~~l~~~~ 168 (369)
T 2eez_A 95 LAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGA-QFLEKPKG--GRGVLLGG---VPGVAPAS 168 (369)
T ss_dssp GGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHH-HHTSGGGT--SCCCCTTC---BTBBCCCE
T ss_pred ccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHH-HHHHHhcC--CCceecCC---CCCCCCCE
Confidence 9999999999999999998 55542 11 34444443 444333 22322210 11223221 13689999
Q ss_pred EEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-cCCc-------ccCHHHHhccCCEEEEcCCCCc-cccccc
Q 006864 232 LAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-VGVE-------LVSFDQALATADFISLHMPLNP-TTSKIF 301 (628)
Q Consensus 232 iGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-~g~~-------~~sl~ell~~aDvV~l~~Plt~-~t~~li 301 (628)
++|+|.|.||+.+|+.++++|++|+++|++... +.+.+ .|.. ..+++++++++|+|+.|++... .+.+++
T Consensus 169 V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li 248 (369)
T 2eez_A 169 VVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLV 248 (369)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCS
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhH
Confidence 999999999999999999999999999987532 22333 4442 2357788999999999999775 678889
Q ss_pred cHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEE---------EcCCCCCC
Q 006864 302 NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVT---------VTPHLGAS 372 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvi---------lTPHig~~ 372 (628)
.++.++.||+|+++||++- ..| |+ +|++ ||.+.+.|++..+|+. +|||.++.
T Consensus 249 ~~~~l~~mk~gg~iV~v~~-------------~~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~ 309 (369)
T 2eez_A 249 TRDMLSLMKEGAVIVDVAV-------------DQG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTF 309 (369)
T ss_dssp CHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGGSHHHHHH
T ss_pred HHHHHHhhcCCCEEEEEec-------------CCC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHHH
Confidence 9999999999999999982 122 44 8988 7766678899999999 88998875
Q ss_pred --cHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q 006864 373 --TKEAQEGVAIEIAEAVVGALRGELSATAINA 403 (628)
Q Consensus 373 --T~ea~~~~~~~~~~~i~~~l~g~~~~~~vn~ 403 (628)
+.+.+..+...+.+++..++.++...+.+|.
T Consensus 310 ~~~~~~~~~l~~l~~~g~~~~~~~~~l~~~~~~ 342 (369)
T 2eez_A 310 ALTNQTLPYVLKLAEKGLDALLEDAALLKGLNT 342 (369)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHSCHHHHTTEEE
T ss_pred HHHHHHHHHHHHHHhcChhhhhcChHHhcCEEe
Confidence 5677778878888877667777666666653
No 43
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.80 E-value=8.3e-21 Score=206.33 Aligned_cols=155 Identities=21% Similarity=0.341 Sum_probs=128.0
Q ss_pred eee-ecCCeEEEEecChhHHHHHHHHHc-CCCEEEEE-CCCCChhHHHHcCCcccCHHHHhccCCE-EEEcCCCCccccc
Q 006864 224 GVS-LVGKTLAVMGFGKVGSEVARRAKG-LGMNVIAH-DPYAPADKARAVGVELVSFDQALATADF-ISLHMPLNPTTSK 299 (628)
Q Consensus 224 g~~-l~GktiGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~~~a~~~g~~~~sl~ell~~aDv-V~l~~Plt~~t~~ 299 (628)
|.+ |+|||+||+|+|+||+.+|++|++ |||+|++| |++... .+...++++++++.+|. .++ +|+ ++|++
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~-----~~~~gvdl~~L~~~~d~~~~l-~~l-~~t~~ 278 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGI-----YNPDGLNADEVLKWKNEHGSV-KDF-PGATN 278 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEE-----EEEEEECHHHHHHHHHHHSSS-TTC-TTSEE
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccc-----cCccCCCHHHHHHHHHhcCEe-ecC-ccCee
Confidence 567 999999999999999999999999 99999999 554310 11123477777775553 333 577 67888
Q ss_pred cccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCC-CccccCCcEEEcCCC----C----
Q 006864 300 IFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKD-SKLVQHENVTVTPHL----G---- 370 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~-~~L~~~~nvilTPHi----g---- 370 (628)
++.+.|..||+ .++||||||++||+++ +++|+.+.|++++ +||++++ ++||..+||++|||+ |
T Consensus 279 -i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt~ 350 (419)
T 1gtm_A 279 -ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVTV 350 (419)
T ss_dssp -ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHHH
T ss_pred -eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCccee
Confidence 79999999998 5999999999999999 6999999999887 8997644 689999999999999 6
Q ss_pred -------------CCcHHHHHHHHHHHHHHHHHHHc
Q 006864 371 -------------ASTKEAQEGVAIEIAEAVVGALR 393 (628)
Q Consensus 371 -------------~~T~ea~~~~~~~~~~~i~~~l~ 393 (628)
|.++|.++++...+.+++.++++
T Consensus 351 s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~ 386 (419)
T 1gtm_A 351 SYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYN 386 (419)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeehhhhcccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888888888773
No 44
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.79 E-value=9.8e-19 Score=189.58 Aligned_cols=220 Identities=18% Similarity=0.204 Sum_probs=155.3
Q ss_pred CCHhHHHHhhcCC-cEEEe------cCCCHhHHHhh---------cCCCeEEEEcCCCCCCHHHHHhcCCcceeEEeccc
Q 006864 99 LGEAGLAILRSFG-NVECL------YDLSPEALCEK---------ISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGV 162 (628)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~------~~~~~~el~~~---------~~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~ 162 (628)
+.|+....|...+ +|.+. ..+++++..+. +-++|+|+.. .. ..++.++.+++++++|+..+.
T Consensus 25 ltP~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~adiil~v-k~-p~~~~i~~l~~~~~li~~~~~ 102 (401)
T 1x13_A 25 ATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILKV-NA-PLDDEIALLNPGTTLVSFIWP 102 (401)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGSSSEEECS-SC-CCHHHHTTCCTTCEEEECCCG
T ss_pred CCHHHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhcCCeEEEe-CC-CCHHHHHHhcCCCcEEEEecC
Confidence 4455555554443 44432 23455554422 3338987743 22 457778877678999999999
Q ss_pred ccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhH--HHHHHHcCcccccc-ccee-----eecCCeEEE
Q 006864 163 GIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQ--ADASIKAGKWLRSK-YVGV-----SLVGKTLAV 234 (628)
Q Consensus 163 G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~--~~~~~~~g~W~~~~-~~g~-----~l~GktiGI 234 (628)
|+|++|++++.++||.|+ +.++|+|++.++.|.+++.+.. .+..++.+.|.... +.+. ++.|++++|
T Consensus 103 ~~d~~~~~al~~~gI~v~-----~~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~V 177 (401)
T 1x13_A 103 AQNPELMQKLAERNVTVM-----AMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMV 177 (401)
T ss_dssp GGCHHHHHHHHHTTCEEE-----EGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEE
T ss_pred CCCHHHHHHHHHCCCEEE-----EeehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeeccCcCCCEEEE
Confidence 999999999999999996 4566667666654333333322 23444444442111 1111 688999999
Q ss_pred EecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc----------------------------CHHHHhccCC
Q 006864 235 MGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV----------------------------SFDQALATAD 285 (628)
Q Consensus 235 IGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~----------------------------sl~ell~~aD 285 (628)
+|+|.||..+++.++++|++|+++|++.. .+.+.++|...+ +++++++.+|
T Consensus 178 iGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aD 257 (401)
T 1x13_A 178 IGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVD 257 (401)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHHCS
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999863 344566776543 2678889999
Q ss_pred EEEEc--CCCCccccccccHHHHhcCCCCcEEEEcC--CCchhcH
Q 006864 286 FISLH--MPLNPTTSKIFNDETFAKMKKGVRIVNVA--RGGVIDE 326 (628)
Q Consensus 286 vV~l~--~Plt~~t~~li~~~~l~~mk~gailIN~a--Rg~~vde 326 (628)
+|+.| +|.. .+..+++++.++.||+|++|||++ ||+.+++
T Consensus 258 vVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 258 IIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp EEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred EEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 99999 5543 366889999999999999999999 7776654
No 45
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.75 E-value=1.3e-17 Score=179.76 Aligned_cols=220 Identities=18% Similarity=0.232 Sum_probs=153.5
Q ss_pred CCHhHHHHhhcCC-cEEEe------cCCCHhHHH-----------hhcCCCeEEEEcCCCCC----CHHHHHhcCCccee
Q 006864 99 LGEAGLAILRSFG-NVECL------YDLSPEALC-----------EKISQCDALIVRSGTKV----TRSVFEAANGKLKV 156 (628)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~------~~~~~~el~-----------~~~~~~d~liv~~~~~v----~~~~l~~~~~~Lk~ 156 (628)
+.|+..+.|.+.+ +|.+. ..++.++.. +.++++|+|+... .++ +++.++.+++.+++
T Consensus 18 l~P~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v~-~p~~~~~~~~~i~~l~~~~~~ 96 (384)
T 1l7d_A 18 ISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQ-RPMTAEEGTDEVALIKEGAVL 96 (384)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEEE-CCCCGGGSCCGGGGSCTTCEE
T ss_pred CCHHHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEec-CcccccCCHHHHHhhccCCEE
Confidence 4566666665554 44432 234555544 3567899988653 455 67888888768999
Q ss_pred EEecccccCcccHhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccc-----e-eeecCC
Q 006864 157 VGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYV-----G-VSLVGK 230 (628)
Q Consensus 157 I~~~g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~-----g-~~l~Gk 230 (628)
|+....+.|+.|++++.++||.++|. ......++++.+. +|+..+.+ ..+..+..+.|....+. + .++.|+
T Consensus 97 i~~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~ 173 (384)
T 1l7d_A 97 MCHLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGTVPPA 173 (384)
T ss_dssp EEECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEEECCC
T ss_pred EEEecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCCCCCC
Confidence 99999999999999999999999974 2222212222333 22222222 23344444444321111 1 478999
Q ss_pred eEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc---C---------------------------HHH
Q 006864 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV---S---------------------------FDQ 279 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~---s---------------------------l~e 279 (628)
+++|+|+|.||+.+++.++++|++|+++|++. ..+.++++|...+ . +++
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~ 253 (384)
T 1l7d_A 174 RVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLK 253 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHH
Confidence 99999999999999999999999999999886 3455566776543 1 778
Q ss_pred HhccCCEEEEcC--CCCccccccccHHHHhcCCCCcEEEEcC--CCch
Q 006864 280 ALATADFISLHM--PLNPTTSKIFNDETFAKMKKGVRIVNVA--RGGV 323 (628)
Q Consensus 280 ll~~aDvV~l~~--Plt~~t~~li~~~~l~~mk~gailIN~a--Rg~~ 323 (628)
+++.+|+|+.|+ |..+ +.++++++.++.||+|++|||++ ||+.
T Consensus 254 ~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~ 300 (384)
T 1l7d_A 254 ELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGN 300 (384)
T ss_dssp HHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred HhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCC
Confidence 889999999877 4332 46788999999999999999998 6653
No 46
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.72 E-value=1.9e-17 Score=179.51 Aligned_cols=183 Identities=20% Similarity=0.291 Sum_probs=133.3
Q ss_pred CeEEEEcCCCCCCHHHHHhcC---CcceeEE-ecccccCccc-HhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHch
Q 006864 131 CDALIVRSGTKVTRSVFEAAN---GKLKVVG-RAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNV 205 (628)
Q Consensus 131 ~d~liv~~~~~v~~~~l~~~~---~~Lk~I~-~~g~G~D~iD-l~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i 205 (628)
.+.|+ ..+..++.-+....+ ++++-+. -.++|+.... +.++.+.+|+|+|++...+....+...+..-++.+.+
T Consensus 123 p~~il-DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi 201 (436)
T 3h9u_A 123 PNMLL-DDGGDLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGI 201 (436)
T ss_dssp CSEEE-ESSSHHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH
T ss_pred CceEe-ccccHHHHHHHHHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHH
Confidence 45444 444445554444432 2334443 3577877643 4566789999999987555554443333222222211
Q ss_pred hHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcccCHHHHhccC
Q 006864 206 SQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALATA 284 (628)
Q Consensus 206 ~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~sl~ell~~a 284 (628)
. + ..+.++.||++||+|+|.||+.+|++|++|||+|++||++.. ...+...|+..+++++++++|
T Consensus 202 ~------r--------atg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~A 267 (436)
T 3h9u_A 202 K------R--------ATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEA 267 (436)
T ss_dssp H------H--------HHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTC
T ss_pred H------H--------hcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhC
Confidence 1 1 136789999999999999999999999999999999999752 234566788888999999999
Q ss_pred CEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCch-hcHHHHHHH
Q 006864 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV-IDEEALVRA 332 (628)
Q Consensus 285 DvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~-vde~aL~~a 332 (628)
|+|++ ++.|+++|+++.|++||+|++|||++||.+ ||.++|.+.
T Consensus 268 DVVil----t~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 268 HIFVT----TTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp SEEEE----CSSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred CEEEE----CCCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 99997 456899999999999999999999999997 899998764
No 47
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.68 E-value=9.8e-17 Score=173.70 Aligned_cols=155 Identities=21% Similarity=0.236 Sum_probs=117.8
Q ss_pred ecccccCccc-HhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec
Q 006864 159 RAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF 237 (628)
Q Consensus 159 ~~g~G~D~iD-l~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl 237 (628)
-.++|+-.+- +...-...++++|+.+ ++..+-+-......+.+..+... ..+.++.|||+||+|+
T Consensus 190 eTtTGv~rL~~m~~~g~L~~PvinVnd----s~tK~~fDn~yG~~eslvdgI~R----------atg~~L~GKTVgVIG~ 255 (464)
T 3n58_A 190 ETTTGVNRLYQLQKKGLLPFPAINVND----SVTKSKFDNKYGCKESLVDGIRR----------GTDVMMAGKVAVVCGY 255 (464)
T ss_dssp CSHHHHHHHHHHHHHTCCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHHHH----------HHCCCCTTCEEEEECC
T ss_pred ccccchHHHHHHHHcCCCCCCEEeecc----HhhhhhhhhhhcchHHHHHHHHH----------hcCCcccCCEEEEECc
Confidence 3577776642 2333345678888754 45555554444444433322211 1367899999999999
Q ss_pred ChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEE
Q 006864 238 GKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIV 316 (628)
Q Consensus 238 G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailI 316 (628)
|.||+.+|++|++|||+|+++|+... ...+...|++.+++++++++||+|+++. .|+++|+++.|++||+|++||
T Consensus 256 G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GAILI 331 (464)
T 3n58_A 256 GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMCIVG 331 (464)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCeEEE
Confidence 99999999999999999999987642 2344567888889999999999999864 478999999999999999999
Q ss_pred EcCCCch-hcHHHHHH
Q 006864 317 NVARGGV-IDEEALVR 331 (628)
Q Consensus 317 N~aRg~~-vde~aL~~ 331 (628)
|++||.+ +|.++|.+
T Consensus 332 NvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 332 NIGHFDNEIQVAALRN 347 (464)
T ss_dssp ECSSSTTTBTCGGGTT
T ss_pred EcCCCCcccCHHHHHh
Confidence 9999998 89988764
No 48
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.65 E-value=8.7e-18 Score=182.25 Aligned_cols=210 Identities=17% Similarity=0.172 Sum_probs=164.6
Q ss_pred cceeEEecccccCcccHhHHH-----hcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccc----ccc
Q 006864 153 KLKVVGRAGVGIDNVDLQAAT-----EFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS----KYV 223 (628)
Q Consensus 153 ~Lk~I~~~g~G~D~iDl~aa~-----~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~----~~~ 223 (628)
.+++|.+.|+|+|++++.++. ++++.++|.+|+ ...++++.+.+++.+.|++...... ..+.|.-. ...
T Consensus 81 a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~-~~~~~s~a~~av~~a 158 (404)
T 1gpj_A 81 AVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRI-SEGAVSIGSAAVELA 158 (404)
T ss_dssp HHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSST-TCSCCSHHHHHHHHH
T ss_pred HhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhh-cCCCccHHHHHHHHH
Confidence 688999999999999999998 899999999988 5789999999999999998766433 34555321 011
Q ss_pred e---eeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCCh--hHHHHcCCcc---cCHHHHhccCCEEEEcCCCC
Q 006864 224 G---VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVGVEL---VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 224 g---~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g~~~---~sl~ell~~aDvV~l~~Plt 294 (628)
. .++.|++++|||+|.||+.+++.|+++|+ +|+++|+.... +.+..+|... .++.+++.++|+|+.|+|.
T Consensus 159 ~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~- 237 (404)
T 1gpj_A 159 ERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA- 237 (404)
T ss_dssp HHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS-
T ss_pred HHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC-
Confidence 1 14789999999999999999999999999 99999997532 3445567543 3678888999999999874
Q ss_pred ccccccccHHHHhc--CC----CCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEE--c
Q 006864 295 PTTSKIFNDETFAK--MK----KGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTV--T 366 (628)
Q Consensus 295 ~~t~~li~~~~l~~--mk----~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvil--T 366 (628)
+..+++++.++. || ++.++||++ +|.+.+++++++|||++ +
T Consensus 238 --~~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d~ 286 (404)
T 1gpj_A 238 --PHPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRTI 286 (404)
T ss_dssp --SSCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEEH
T ss_pred --CCceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEeH
Confidence 356778888876 43 556677665 36555788999999999 9
Q ss_pred CCCCCCcHHHHH----------HHHHHHHHHHHHHHcCCC
Q 006864 367 PHLGASTKEAQE----------GVAIEIAEAVVGALRGEL 396 (628)
Q Consensus 367 PHig~~T~ea~~----------~~~~~~~~~i~~~l~g~~ 396 (628)
||+++.+.++++ .+..+.++++..|+.+..
T Consensus 287 d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~~ 326 (404)
T 1gpj_A 287 DDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKLK 326 (404)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999998765 555666778888887654
No 49
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.60 E-value=2.6e-15 Score=162.38 Aligned_cols=159 Identities=19% Similarity=0.273 Sum_probs=115.6
Q ss_pred cceeEE-ecccccCccc-HhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCC
Q 006864 153 KLKVVG-RAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (628)
Q Consensus 153 ~Lk~I~-~~g~G~D~iD-l~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~Gk 230 (628)
+++-+. -..+|+-.+- +...-+..++|+|+.+..+..--+. .......+..+.. + ..+..+.||
T Consensus 156 ~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn----~yGt~~s~~~gi~--r--------at~~~L~Gk 221 (435)
T 3gvp_A 156 KIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDN----LYCCRESILDGLK--R--------TTDMMFGGK 221 (435)
T ss_dssp TCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHT----HHHHHHHHHHHHH--H--------HHCCCCTTC
T ss_pred hcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhh----hhhhHHHHHHHHH--H--------hhCceecCC
Confidence 344442 3567776542 2334467799999987555443332 1111111111110 0 135789999
Q ss_pred eEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcC
Q 006864 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~m 309 (628)
+++|+|+|.||+.+|++|++|||+|+++|+.. ....+...|++..++++++++||+|++| +.|+++|+++.|+.|
T Consensus 222 tV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~M 297 (435)
T 3gvp_A 222 QVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRM 297 (435)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhc
Confidence 99999999999999999999999999999864 2334566788788999999999999995 567899999999999
Q ss_pred CCCcEEEEcCCCch-hcHHHH
Q 006864 310 KKGVRIVNVARGGV-IDEEAL 329 (628)
Q Consensus 310 k~gailIN~aRg~~-vde~aL 329 (628)
|+|++|||++||.. +|.++|
T Consensus 298 K~gailINvgrg~~EId~~~L 318 (435)
T 3gvp_A 298 KNSCIVCNMGHSNTEIDVASL 318 (435)
T ss_dssp CTTEEEEECSSTTTTBTGGGG
T ss_pred CCCcEEEEecCCCccCCHHHH
Confidence 99999999999998 677665
No 50
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.51 E-value=3.9e-15 Score=156.25 Aligned_cols=237 Identities=18% Similarity=0.133 Sum_probs=162.7
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCC-ChhHHHHcCC--c-ccCHHH-HhccCCEEEEcCCCCcccc
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYA-PADKARAVGV--E-LVSFDQ-ALATADFISLHMPLNPTTS 298 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~-~~~~a~~~g~--~-~~sl~e-ll~~aDvV~l~~Plt~~t~ 298 (628)
++..++|||||+|.||+.+|+.|+..|+ +|++||+.. ..+.+.+.|+ . ..++++ ++++||+|++|+|... +.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~-~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT-FR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGG-HH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHH-HH
Confidence 3445899999999999999999999999 999999985 3345566776 2 247888 8999999999999553 34
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCC---CCCCCCccccCCcEEEcCCCCCCcHH
Q 006864 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE---PPAKDSKLVQHENVTVTPHLGASTKE 375 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~E---P~~~~~~L~~~~nvilTPHig~~T~e 375 (628)
.++ ++....++++++|++++..+....+++.+.+.. ++.+. --++..| |..+...||....+++||+-+.. .+
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~-hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~-~~ 184 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGG-HPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KK 184 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECE-EECCCCCCCSGGGCCTTTTTTCEEEECCCTTSC-HH
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEec-CcccCCcccchhhhhhhhhcCCEEEEEeCCCCC-HH
Confidence 444 556667999999999998887667777777755 44321 1244433 32345678999999999996554 33
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcccCCCCCcccccccc------cHHHHHHHHhHH----------HHHHhcCCCCce
Q 006864 376 AQEGVAIEIAEAVVGALRGELSATAINAPMVPSEVLSELA------PYVVLAKKLGRL----------AVQLVSGGSGIK 439 (628)
Q Consensus 376 a~~~~~~~~~~~i~~~l~g~~~~~~vn~p~~~~~~~~~~~------p~~~lAerlG~l----------a~qL~~g~~~~~ 439 (628)
+ .+.+.++++.-.. .++ .+.++.++.+- |++. +.-++.. +.+++++ +|+
T Consensus 185 ~--------~~~v~~l~~~~G~-~v~---~~~~~~hD~~~a~~s~lph~~-a~~l~~~~~~~~~~~~~~~~~a~~--~fr 249 (314)
T 3ggo_A 185 R--------LKLVKRVWEDVGG-VVE---YMSPELHDYVFGVVSHLPHAV-AFALVDTLIHMSTPEVDLFKYPGG--GFK 249 (314)
T ss_dssp H--------HHHHHHHHHHTTC-EEE---ECCHHHHHHHHHHHTHHHHHH-HHHHHHHHHHHCCSSCCGGGCCTT--TTT
T ss_pred H--------HHHHHHHHHHcCC-EEE---EcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCcchHHHHhhccc--cHH
Confidence 2 2333333332121 111 35667776544 4332 2222222 2345666 899
Q ss_pred EEEEEEeecCCCCCCCcccchHHHHHhhccccccCcccccchHh
Q 006864 440 SVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLVNADF 483 (628)
Q Consensus 440 ~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vnlvNA~~ 483 (628)
++++++.+++. +|.+....|+..+...|+.+.++...+.++..
T Consensus 250 d~tRia~~~p~-~w~di~~~N~~~~~~~l~~~~~~l~~l~~~l~ 292 (314)
T 3ggo_A 250 DFTRIAKSDPI-MWRDIFLENKENVMKAIEGFEKSLNHLKELIV 292 (314)
T ss_dssp THHHHTTSCHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 99999999998877778777766556665554
No 51
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=4.7e-15 Score=157.33 Aligned_cols=242 Identities=12% Similarity=0.064 Sum_probs=156.6
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHHhcc----CCEEEEcCCCCcccccccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL-VSFDQALAT----ADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~-~sl~ell~~----aDvV~l~~Plt~~t~~li~ 302 (628)
-++|||||+|.||+++|+.|+..|++|++||++. ..+.+.+.|+.. .++++++++ ||+|++|+|. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 3689999999999999999999999999999875 334566778754 478888765 6999999994 3455555
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCC---CCCCCCccccCCcEEEcCCCCCCcHHHHHH
Q 006864 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE---PPAKDSKLVQHENVTVTPHLGASTKEAQEG 379 (628)
Q Consensus 303 ~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~E---P~~~~~~L~~~~nvilTPHig~~T~ea~~~ 379 (628)
+.+..++++++|+|++..+....+++.+.+...++.+. --+++.| |..++..||...++++||+-+......+ .
T Consensus 86 -~~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~-HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~-~ 162 (341)
T 3ktd_A 86 -DAVHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGS-HPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDIN-S 162 (341)
T ss_dssp -HHHHHHCTTCCEEECCSCSHHHHHHHHHTTCGGGEECE-EECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCC-H
T ss_pred -HHHHccCCCCEEEEcCCCChHHHHHHHHhCCCCcEecC-CccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhc-c
Confidence 23444699999999998877655666655532223221 1234433 2234567999999999998654422000 0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcccCCCCCcccccccc------cHHHHH---HH---HhHHHHHHhcCCCCceEEEEEEee
Q 006864 380 VAIEIAEAVVGALRGELSATAINAPMVPSEVLSELA------PYVVLA---KK---LGRLAVQLVSGGSGIKSVKLIYRS 447 (628)
Q Consensus 380 ~~~~~~~~i~~~l~g~~~~~~vn~p~~~~~~~~~~~------p~~~lA---er---lG~la~qL~~g~~~~~~v~i~~~G 447 (628)
......+.+..+++.-.. .++ .+.++.+|.+- |++... .. -...+.+|+++ +|++++++..+
T Consensus 163 ~~~~~~~~v~~l~~~~Ga-~v~---~~~~~~HD~~~A~vshlPh~ia~aL~~~~~~~~~~~~~laa~--gfrd~tRia~s 236 (341)
T 3ktd_A 163 TWISIWKDVVQMALAVGA-EVV---PSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAG--SYRDSTRVAGT 236 (341)
T ss_dssp HHHHHHHHHHHHHHHTTC-EEE---ECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTHHHHHHHCCH--HHHHHTGGGGS
T ss_pred chHHHHHHHHHHHHHcCC-EEE---EeCHHHHHHHHHHHhHHHHHHHHHHHHHhhcchHHHHHHccc--cHHHHHHHhcC
Confidence 011123334444432221 111 35666776654 433211 11 11234567777 89999999999
Q ss_pred cCCCCCCCcccchHHHHHhhccccccCcccccchH
Q 006864 448 ARDPDDLDTRILRAMITKGIIEPISASFINLVNAD 482 (628)
Q Consensus 448 s~a~~~~~~~~~~~a~l~GlL~~~~~~~vnlvNA~ 482 (628)
++. +|.+....|+..+...|+.+.++...+.++.
T Consensus 237 ~p~-lw~di~~~N~~~~~~~l~~~~~~L~~l~~~l 270 (341)
T 3ktd_A 237 DPG-LVRAMCESNAGPLVKALDEALAILHEAREGL 270 (341)
T ss_dssp CHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHH-HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 9999999999777667766666544555444
No 52
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.30 E-value=1.3e-11 Score=126.25 Aligned_cols=213 Identities=16% Similarity=0.143 Sum_probs=134.0
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCC-hhHHHHcCCc---ccCHHHHhc-cCCEEEEcCCCCcccccccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAP-ADKARAVGVE---LVSFDQALA-TADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~-~~~a~~~g~~---~~sl~ell~-~aDvV~l~~Plt~~t~~li~ 302 (628)
++|||||+|.||+.+|+.|+..|+ +|++||+... .+.+.+.|+. ..+++++++ +||+|++|+|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 589999999999999999999998 9999998752 2344556764 237888999 999999999954 3455543
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCC---CCCCCCccccCCcEEEcCCCCCCcHHHHHH
Q 006864 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE---PPAKDSKLVQHENVTVTPHLGASTKEAQEG 379 (628)
Q Consensus 303 ~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~E---P~~~~~~L~~~~nvilTPHig~~T~ea~~~ 379 (628)
+....++++++|++++++.....+.+.+.+..+.+.+ .-++..| |..+...|+...+++++||.++.. +.
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~-~~--- 153 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDK-KR--- 153 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCH-HH---
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEecCCCCCH-HH---
Confidence 4556789999999999988877788888887642211 2234433 333455788888999999987763 22
Q ss_pred HHHHHHHHHHHHHcCCCCCCcccCCCCCcccccccc------c-H--HHHHHHHhH------HHHHHhcCCCCceEEEEE
Q 006864 380 VAIEIAEAVVGALRGELSATAINAPMVPSEVLSELA------P-Y--VVLAKKLGR------LAVQLVSGGSGIKSVKLI 444 (628)
Q Consensus 380 ~~~~~~~~i~~~l~g~~~~~~vn~p~~~~~~~~~~~------p-~--~~lAerlG~------la~qL~~g~~~~~~v~i~ 444 (628)
.+.+.++++.-... ++ .+..+.++.+. | | ..+.+.++. .+..|+++ +++++...
T Consensus 154 -----~~~v~~l~~~~g~~-~~---~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~r~ 222 (281)
T 2g5c_A 154 -----LKLVKRVWEDVGGV-VE---YMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGG--GFKDFTRI 222 (281)
T ss_dssp -----HHHHHHHHHHTTCE-EE---ECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGCCTT--TGGGC---
T ss_pred -----HHHHHHHHHHcCCE-EE---EcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhhccc--cHHHHhHH
Confidence 23333444322211 11 12223332211 2 1 123333332 12345545 78777777
Q ss_pred EeecCCCCCCCcccchHH
Q 006864 445 YRSARDPDDLDTRILRAM 462 (628)
Q Consensus 445 ~~Gs~a~~~~~~~~~~~a 462 (628)
..+++. .|.+...++..
T Consensus 223 ~~~~p~-~~~~~~~sn~~ 239 (281)
T 2g5c_A 223 AKSDPI-MWRDIFLENKE 239 (281)
T ss_dssp CCSCHH-HHHHHHHHTHH
T ss_pred hcCCHH-HHHHHHHHCHH
Confidence 666665 66666666664
No 53
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.24 E-value=2.6e-11 Score=128.96 Aligned_cols=109 Identities=24% Similarity=0.336 Sum_probs=93.6
Q ss_pred ee-eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcccCHHHHhc-cCCEEEEcCCCCcccccc
Q 006864 224 GV-SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALA-TADFISLHMPLNPTTSKI 300 (628)
Q Consensus 224 g~-~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~sl~ell~-~aDvV~l~~Plt~~t~~l 300 (628)
|. ++.|||++|+|+|+||+.+|++|+++||+|+++|++.. .+.+...+++.+++++++. +||+++-| .+.++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-----A~~~~ 243 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-----AMGGV 243 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-----SCSCC
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-----HHHhh
Confidence 55 79999999999999999999999999999999998743 2334556777888899998 99999753 57899
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCee
Q 006864 301 FNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (628)
Q Consensus 301 i~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 339 (628)
|+++.++.|| ..+|+|++|+.+.++++ .++|+++.+.
T Consensus 244 I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 244 ITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp BCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred cCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 9999999998 78999999999999888 5888887764
No 54
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.24 E-value=4.5e-10 Score=120.26 Aligned_cols=210 Identities=15% Similarity=0.136 Sum_probs=132.5
Q ss_pred CCHhHHHHhhcCC-cEEEec------CCCHhHHHhh---c---CCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccC
Q 006864 99 LGEAGLAILRSFG-NVECLY------DLSPEALCEK---I---SQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGID 165 (628)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~~------~~~~~el~~~---~---~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D 165 (628)
+.|+..+.|.+.+ +|.+.. .+++++..+. + -.+|.|+- - ...+.+.++...++-.+++..---.|
T Consensus 40 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIlk-V-k~p~~~e~~~l~~g~~l~~~lh~~~~ 117 (381)
T 3p2y_A 40 LVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVK-V-NPPTSDEISQLKPGSVLIGFLAPRTQ 117 (381)
T ss_dssp SCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEEC-S-SCCCHHHHTTSCTTCEEEECCCTTTC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEEE-e-CCCChhHHhhccCCCEEEEEeccccC
Confidence 4567777776554 555543 2455555331 1 12676652 1 23556667766666777766555445
Q ss_pred cccHhHHHhcCceEEcCCCCC----hh------hHHHHHHHHHHHHHHchhHHHHHHHcCcccccccce-eeecCCeEEE
Q 006864 166 NVDLQAATEFGCLVVNAPIAN----TV------AAAEHGIALLASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAV 234 (628)
Q Consensus 166 ~iDl~aa~~~GI~V~n~p~~~----~~------avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~GktiGI 234 (628)
.=-++++.++||...---... +. +++|.+= .+-+..+.+. -++.......+ ..+.+++++|
T Consensus 118 ~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAG------y~Av~~aa~~--l~~~~~~l~~~~~~v~~~kV~V 189 (381)
T 3p2y_A 118 PELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAG------YKAVLLGASL--STRFVPMLTTAAGTVKPASALV 189 (381)
T ss_dssp HHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHH------HHHHHHHHHH--CSSCSSCEECSSCEECCCEEEE
T ss_pred HHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHH------HHHHHHHHHH--hhhhhhhhhcccCCcCCCEEEE
Confidence 444688899999885322221 11 2222221 1111111111 11111100011 2578999999
Q ss_pred EecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc--------------------------CHHHHhccCCEE
Q 006864 235 MGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV--------------------------SFDQALATADFI 287 (628)
Q Consensus 235 IGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~--------------------------sl~ell~~aDvV 287 (628)
||+|.||..+|+.++++|++|++||++.. .+.+.++|.+++ ++++++++||+|
T Consensus 190 iG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIV 269 (381)
T 3p2y_A 190 LGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIV 269 (381)
T ss_dssp ESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEE
T ss_pred ECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEE
Confidence 99999999999999999999999999863 345566665432 467899999999
Q ss_pred EEcC--CCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 288 SLHM--PLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 288 ~l~~--Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
+.++ |.. .+..+++++.++.||+|++|||++
T Consensus 270 I~tv~iPg~-~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 270 ITTALVPGR-PAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp EECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETT
T ss_pred EECCCCCCc-ccceeecHHHHhcCCCCcEEEEEe
Confidence 9875 542 356789999999999999999997
No 55
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.22 E-value=1.2e-11 Score=129.61 Aligned_cols=131 Identities=17% Similarity=0.163 Sum_probs=93.6
Q ss_pred HHHHHcCcccccccc-----eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHh
Q 006864 209 DASIKAGKWLRSKYV-----GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQAL 281 (628)
Q Consensus 209 ~~~~~~g~W~~~~~~-----g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell 281 (628)
++.++...|..+.+. ......++|||||+|.||+.+|+.|...|++|.+||+... .+...+.|+... ++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~ 85 (320)
T 4dll_A 6 HHSSGVDLGTENLYFQSMTVESDPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA 85 (320)
T ss_dssp -----------------------CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH
T ss_pred cccccccccccccceechhhccccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH
Confidence 345566666554321 1234567999999999999999999999999999998753 233444576654 899999
Q ss_pred ccCCEEEEcCCCCccccccccH-HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCee
Q 006864 282 ATADFISLHMPLNPTTSKIFND-ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (628)
Q Consensus 282 ~~aDvV~l~~Plt~~t~~li~~-~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 339 (628)
++||+|++|+|....++.++.. +.+..++++.++||++++...+.+.+.+.+++..+.
T Consensus 86 ~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 86 RDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp TTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 9999999999976666666543 566779999999999999999999999998876553
No 56
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.20 E-value=1.7e-11 Score=127.79 Aligned_cols=126 Identities=17% Similarity=0.105 Sum_probs=99.2
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCcccccccc
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~ 302 (628)
.++..++|||||+|.||+.+|++|...|++|.+||+... .+...+.|+... ++++++++||+|++++|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 345678999999999999999999999999999998752 233445576554 899999999999999997766777775
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCC
Q 006864 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEP 350 (628)
Q Consensus 303 ~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP 350 (628)
.+.+..+++|.++||++++...+.+.+.+.+++..+....--|+...|
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~ 132 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPR 132 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGG
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcc
Confidence 334666889999999999999999999999877555322223444433
No 57
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.19 E-value=6.3e-10 Score=120.04 Aligned_cols=180 Identities=17% Similarity=0.200 Sum_probs=113.7
Q ss_pred CCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccHhHHHhcCceEEcCCCCC------h----hhHHHHHHHHH
Q 006864 129 SQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIAN------T----VAAAEHGIALL 198 (628)
Q Consensus 129 ~~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl~aa~~~GI~V~n~p~~~------~----~avAE~~l~l~ 198 (628)
.++|+|+-- ...+.+-++...++-.+++..--.-|.--++++.++||...---... . .+++|.+=
T Consensus 89 ~~adiIlkV--k~p~~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAG--- 163 (405)
T 4dio_A 89 KTADVILKV--RRPSAQEISGYRSGAVVIAIMDPYGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAG--- 163 (405)
T ss_dssp GGCSEEEEE--ECCCTTTGGGSCTTCEEEEECCCTTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHH---
T ss_pred ccCCEEEEe--CCCChhHHhhcCCCcEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHH---
Confidence 457877631 12333444555556666665444334444688889999885332221 1 12222221
Q ss_pred HHHHHchhHHHHHHHcCcccccccce-eeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCcc--
Q 006864 199 ASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVEL-- 274 (628)
Q Consensus 199 L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~-- 274 (628)
.+-+..+.+.+ ++.......+ ..+.+.+++|+|+|.||..+|+.++++|++|++||++... +.+.++|..+
T Consensus 164 ---y~Av~~aa~~l--~~~~~~l~t~~g~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~ 238 (405)
T 4dio_A 164 ---YQAVIDAAYEY--DRALPMMMTAAGTVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIA 238 (405)
T ss_dssp ---HHHHHHHHHHC--SSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECC
T ss_pred ---HHHHHHHHHHh--HhhhchhhccCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceee
Confidence 11111111111 1111100111 2578999999999999999999999999999999998743 4455566532
Q ss_pred ----------------------------cCHHHHhccCCEEEEcC--CCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 275 ----------------------------VSFDQALATADFISLHM--PLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 275 ----------------------------~sl~ell~~aDvV~l~~--Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
.++.+++++||+|+.++ |.. ....+++++.++.||+|++|||++
T Consensus 239 ~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 239 VEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp CCC-----------------CHHHHHHHHHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETT
T ss_pred cccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEe
Confidence 14788899999998875 533 357889999999999999999997
No 58
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.18 E-value=3.1e-11 Score=125.79 Aligned_cols=113 Identities=20% Similarity=0.274 Sum_probs=96.1
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCcccccccc--HHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~--~~~ 305 (628)
|+|||||+|.||..+|++|...|++|.+||+... .+...+.|.... ++.|+++.||+|++|+|..+..+.++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 6899999999999999999999999999999852 344556677655 899999999999999998887777663 346
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEee
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALD 344 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lD 344 (628)
++.+++|.++||++....-+...+.+.+++..+ ..+|
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~--~~lD 120 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGL--AMLD 120 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC--EEEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC--EEEe
Confidence 788999999999999999999999999998877 4456
No 59
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.17 E-value=4.4e-11 Score=124.77 Aligned_cols=115 Identities=9% Similarity=0.103 Sum_probs=93.9
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li 301 (628)
.....-++|||||+|.||..+|++|...|++|.+||+... .+...+.|+... ++++++++||+|++|+|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 3455568999999999999999999999999999999863 344556677654 89999999999999999766666655
Q ss_pred --cHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 302 --NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 302 --~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
.++.+..+++|.+|||+++......+.+.+.+.+..+
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 134 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG 134 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 2455677999999999999999999999988877544
No 60
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.16 E-value=8.8e-12 Score=126.98 Aligned_cols=176 Identities=16% Similarity=0.154 Sum_probs=124.0
Q ss_pred CCCHhHHHhhcCC----CeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccHhHHHhcCceEEcCCCCChhhHHHH
Q 006864 118 DLSPEALCEKISQ----CDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEH 193 (628)
Q Consensus 118 ~~~~~el~~~~~~----~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE~ 193 (628)
+.+++++.+.+.+ ++++.+. .++.+++++.+ ++|.-+++...|+|.++. +.| +..|+|++.
T Consensus 37 ~~~~~~l~~~i~~l~~~~~G~~vt--~P~k~~i~~~~-~~l~~~a~~~gavn~i~~----~~g----~~~g~ntd~---- 101 (263)
T 2d5c_A 37 DTPLEALPGRLKEVRRAFRGVNLT--LPLKEAALAHL-DWVSPEAQRIGAVNTVLQ----VEG----RLFGFNTDA---- 101 (263)
T ss_dssp ECCGGGHHHHHHHHHHHCSEEEEC--TTCTTGGGGGC-SEECHHHHHHTCCCEEEE----ETT----EEEEECCHH----
T ss_pred eCCHHHHHHHHHhccccCceEEEc--ccCHHHHHHHH-HHHhHHHHHhCCCCcEEc----cCC----eEEEeCCCH----
Confidence 4566677665544 4455543 46778888887 489999999999999976 344 234566654
Q ss_pred HHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh--hHHHHcC
Q 006864 194 GIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVG 271 (628)
Q Consensus 194 ~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g 271 (628)
.+++.++.| .+.++.| +++|||+|.+|+.+|+.|..+|++|.++|+.... ..+...+
T Consensus 102 -~g~~~~l~~-------------------~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~ 160 (263)
T 2d5c_A 102 -PGFLEALKA-------------------GGIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG 160 (263)
T ss_dssp -HHHHHHHHH-------------------TTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT
T ss_pred -HHHHHHHHH-------------------hCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 244444433 1346889 9999999999999999999999999999987522 2233445
Q ss_pred CcccCHHHHhccCCEEEEcCCCCc--cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 272 VELVSFDQALATADFISLHMPLNP--TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 272 ~~~~sl~ell~~aDvV~l~~Plt~--~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
....+++++ +++|+|++|+|... ++...+. .+.+++|.+++|++.+.. +. .|.+++++
T Consensus 161 ~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~ 220 (263)
T 2d5c_A 161 LRAVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKA 220 (263)
T ss_dssp CEECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHH
T ss_pred cchhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHH
Confidence 544578888 99999999999762 3334443 466899999999998743 33 36666554
No 61
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.16 E-value=7e-11 Score=123.87 Aligned_cols=138 Identities=17% Similarity=0.141 Sum_probs=97.3
Q ss_pred HHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcCC-CEEEEECCCCC--------hhHHHHcCCccc-CH
Q 006864 208 ADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLG-MNVIAHDPYAP--------ADKARAVGVELV-SF 277 (628)
Q Consensus 208 ~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~--------~~~a~~~g~~~~-sl 277 (628)
++.+.+-+.|.+..++.. --++|||||+|.||..+|+.|...| ++|++||+... .+...+.|+ .. ++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~ 81 (317)
T 4ezb_A 5 HHHSSGVDLGTENLYFQS--MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDD 81 (317)
T ss_dssp ----------CCCHHHHT--SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESS
T ss_pred cccccccccCcccCcccc--cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCH
Confidence 344555566776543221 1368999999999999999999999 99999998741 122334566 56 88
Q ss_pred HHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCC
Q 006864 278 DQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEP 350 (628)
Q Consensus 278 ~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP 350 (628)
++++++||+|++|+|.......+ ++.+..++++.+|||+++......+.+.+.+++..+....--|+..+|
T Consensus 82 ~e~~~~aDvVi~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~ 152 (317)
T 4ezb_A 82 VAGIACADVVLSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVP 152 (317)
T ss_dssp GGGGGGCSEEEECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCST
T ss_pred HHHHhcCCEEEEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCch
Confidence 99999999999999966554433 566778999999999999999999999999987654333223666443
No 62
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.15 E-value=9.4e-11 Score=122.49 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=93.7
Q ss_pred HHHHHcCccccccc--ceeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC---ChhHHHHcCCccc-CHHHHh
Q 006864 209 DASIKAGKWLRSKY--VGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA---PADKARAVGVELV-SFDQAL 281 (628)
Q Consensus 209 ~~~~~~g~W~~~~~--~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~---~~~~a~~~g~~~~-sl~ell 281 (628)
++.++.+.|.+... .......++|||||+|.||+.+|+.|...|+ +|.+||+.. ..+...+.|+... ++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 35567777875421 1223445799999999999999999999999 999999962 2334456677654 899999
Q ss_pred ccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC--CeeEEEeeccCCCC
Q 006864 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG--VVAQAALDVFTEEP 350 (628)
Q Consensus 282 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g--~i~ga~lDV~~~EP 350 (628)
++||+|++|+|...... .+ .+....++++.+|||+++.......++.+.+.+. .+....--|+..+|
T Consensus 82 ~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~ 150 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVK 150 (312)
T ss_dssp HHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCST
T ss_pred hcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCch
Confidence 99999999999665443 32 5667789999999999999999999999888764 33222223666544
No 63
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.15 E-value=4.6e-11 Score=124.24 Aligned_cols=120 Identities=15% Similarity=0.219 Sum_probs=95.9
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHh
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~ 307 (628)
++|||||+|.||..+|++|...|++|++||+... .+...+.|+..+ ++.|++++||+|++++|-.+..+..+....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5799999999999999999999999999998763 233455676655 89999999999999999777777778888899
Q ss_pred cCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCC
Q 006864 308 KMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE 349 (628)
Q Consensus 308 ~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~E 349 (628)
.++++.++||++....-..+.+.+.+++..+...---|+..+
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~ 127 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARP 127 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCH
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCc
Confidence 999999999999999999999999998877743322244433
No 64
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.14 E-value=8.5e-11 Score=121.82 Aligned_cols=117 Identities=20% Similarity=0.187 Sum_probs=95.8
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHH
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETF 306 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l 306 (628)
.++|||||+|.||+.+|++|...|++|.+||+... .+...+.|+... +++++++ ||+|++|+|....++..+ ++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999998863 345566677654 8999999 999999999766667666 6777
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccC
Q 006864 307 AKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFT 347 (628)
Q Consensus 307 ~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~ 347 (628)
..++++.++||+++......+.+.+.+.+..+......|+.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g 133 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSG 133 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEES
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcC
Confidence 78999999999999999999999999987655333223443
No 65
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.12 E-value=1.5e-10 Score=123.49 Aligned_cols=121 Identities=11% Similarity=0.186 Sum_probs=99.0
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccC---CEEEEcCCCCccccccc
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATA---DFISLHMPLNPTTSKIF 301 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~a---DvV~l~~Plt~~t~~li 301 (628)
+.+++|||||+|.||+.+|++|...|++|.+||+... .+...+.|+... +++++++.+ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 5678999999999999999999999999999998752 233444566554 899999999 9999999966 666666
Q ss_pred cHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCC
Q 006864 302 NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE 349 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~E 349 (628)
.+.+..+++|.+|||++++...+...+.+.+++..+......|+..+
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~ 145 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGI 145 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCH
Confidence 56777899999999999999999999999998877755555566654
No 66
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.12 E-value=2.4e-10 Score=117.40 Aligned_cols=139 Identities=19% Similarity=0.170 Sum_probs=100.0
Q ss_pred CeEEEEecChhHHHHHHHHHcC--CCEEEEECCCCC-hhHHHHcCCc---ccCHHHHhccCCEEEEcCCCCccccccccH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL--GMNVIAHDPYAP-ADKARAVGVE---LVSFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~-~~~a~~~g~~---~~sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
++|||||+|.||+.+|+.|... |++|++||+... .+...+.|.. ..++++++++||+|++++|... ...++ +
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~-~ 84 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFI-K 84 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHH-H
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHH-H
Confidence 6899999999999999999865 789999998752 2334455652 2478888999999999999443 34444 3
Q ss_pred HHHhc-CCCCcEEEEcCCCchhcHHHHHHHHhC-C-CeeE----EEeeccCCCCCCCCCccccCCcEEEcCCCCCC
Q 006864 304 ETFAK-MKKGVRIVNVARGGVIDEEALVRALDS-G-VVAQ----AALDVFTEEPPAKDSKLVQHENVTVTPHLGAS 372 (628)
Q Consensus 304 ~~l~~-mk~gailIN~aRg~~vde~aL~~aL~~-g-~i~g----a~lDV~~~EP~~~~~~L~~~~nvilTPHig~~ 372 (628)
+.... ++++++|++++++.....+.+.+.+.. + ++.+ ++.+.. .|......++...+++++||.++.
T Consensus 85 ~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~--g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 85 ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKS--GAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----C--CTTSCCTTTTTTSEEEEEECTTCC
T ss_pred HHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcc--hHHHhhHHHhCCCeEEEecCCCCC
Confidence 34556 899999999999887777888888875 2 2222 111221 233345578888899999998776
No 67
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.11 E-value=1.1e-10 Score=119.97 Aligned_cols=109 Identities=13% Similarity=0.160 Sum_probs=91.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCcccccccc--HHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~--~~~ 305 (628)
++|||||+|.||+.+|+.|...|++|.+||+... .+...+.|+... ++++++++||+|++|+|....++..+. ++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999999863 344555677654 899999999999999996666666652 456
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
+..+++|.++||+++....+.+.+.+.+++..+
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG 114 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 677999999999999999999999998877654
No 68
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.10 E-value=3.8e-11 Score=127.05 Aligned_cols=138 Identities=24% Similarity=0.306 Sum_probs=100.6
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh--hHHHHcCCcccCHHHHhccCCEEEEcCCCCcccccccc
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~ 302 (628)
..+.+++|||||+|.||+++|+.|+..|++|++||+.... +.+.+.|+...++++++++||+|++|+|... ...++.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 4588999999999999999999999999999999987643 4556678766689999999999999999554 355554
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCC---cccc---CCcEEEcCCCCCC
Q 006864 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDS---KLVQ---HENVTVTPHLGAS 372 (628)
Q Consensus 303 ~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~---~L~~---~~nvilTPHig~~ 372 (628)
++....|++|++|++++ + +.. ..+.+. .+.++||+..+|..+.+ .|++ ..++++|||....
T Consensus 91 ~~i~~~l~~~~ivi~~~--g-v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~ 157 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH--G-FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDAS 157 (338)
T ss_dssp HHTGGGCCTTCEEEESC--C-HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSS
T ss_pred HHHHhhCCCCCEEEEcC--C-chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCCC
Confidence 35556799999999884 3 332 222222 12345666666643333 3555 7789999996543
No 69
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.09 E-value=3.5e-10 Score=124.43 Aligned_cols=152 Identities=20% Similarity=0.255 Sum_probs=109.3
Q ss_pred cceeEE-ecccccCccc-HhHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCC
Q 006864 153 KLKVVG-RAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (628)
Q Consensus 153 ~Lk~I~-~~g~G~D~iD-l~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~Gk 230 (628)
+++-+. -..+|+..+. +.+..+..|+|+|+.+..+...-+...+ . .+.+..+-|. ..+..+.||
T Consensus 201 ~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yG----t-------~~sl~dgi~r---~tg~~L~GK 266 (488)
T 3ond_A 201 RVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYG----C-------RHSLPDGLMR---ATDVMIAGK 266 (488)
T ss_dssp HCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHH----H-------HHHHHHHHHH---HHCCCCTTC
T ss_pred hcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhcc----c-------cHHHHHHHHH---HcCCcccCC
Confidence 344443 3578887752 2333457799999977554432222111 1 1112222221 235679999
Q ss_pred eEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhcC
Q 006864 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~m 309 (628)
+++|+|+|.||+.+|++|+++|++|+++|+... ...+...++...++++++..+|+|+.+. .+.++++.+.|+.|
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~at----G~~~vl~~e~l~~m 342 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTT----GNKDIIMLDHMKKM 342 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECS----SCSCSBCHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCC----CChhhhhHHHHHhc
Confidence 999999999999999999999999999998752 2345566777778999999999999754 46788999999999
Q ss_pred CCCcEEEEcCCCc
Q 006864 310 KKGVRIVNVARGG 322 (628)
Q Consensus 310 k~gailIN~aRg~ 322 (628)
|++++|+|++++.
T Consensus 343 k~gaiVvNaG~~~ 355 (488)
T 3ond_A 343 KNNAIVCNIGHFD 355 (488)
T ss_dssp CTTEEEEESSSTT
T ss_pred CCCeEEEEcCCCC
Confidence 9999999999983
No 70
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.08 E-value=9.4e-11 Score=121.26 Aligned_cols=109 Identities=18% Similarity=0.252 Sum_probs=90.2
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCcccccccc--HHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~--~~~ 305 (628)
++|||||+|.||+.+|+.|...|++|.+||+... .+...+.|+... ++++++++||+|++|+|....++.++. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999998752 234455577654 899999999999999997666666553 155
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
+..++++.++||++++.....+.+.+.+++..+
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677999999999999999998899998876433
No 71
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.08 E-value=1.1e-10 Score=119.94 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=90.7
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCcccccccc--HHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~--~~~ 305 (628)
++|||||+|.||+.+|++|...|++|.+||+... .+...+.|+... ++++++++||+|++|+|..+.++..+. ++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 5899999999999999999999999999999863 344455677654 899999999999999997656666552 455
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
+..+++|.++||++++.....+.+.+.+.+..+
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG 114 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677999999999999999999999988877544
No 72
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.07 E-value=3.9e-10 Score=117.01 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=93.6
Q ss_pred HHHHHHHcCcccccccceeeecCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCC
Q 006864 207 QADASIKAGKWLRSKYVGVSLVGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATAD 285 (628)
Q Consensus 207 ~~~~~~~~g~W~~~~~~g~~l~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aD 285 (628)
+.+.+++...|..... ..++||||| +|.||+.+|+.|+..|++|.+||+... .++++++++||
T Consensus 4 ~~~~~~~~~~~~~~~~-----~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-----------~~~~~~~~~aD 67 (298)
T 2pv7_A 4 ESYANENQFGFKTINS-----DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-----------AVAESILANAD 67 (298)
T ss_dssp ---------CCCCSCT-----TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-----------GGHHHHHTTCS
T ss_pred hHHhhhhccCccccCC-----CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-----------cCHHHHhcCCC
Confidence 4556667778964322 357899999 999999999999999999999998642 15678889999
Q ss_pred EEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCC-CCCccccCCcEE
Q 006864 286 FISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPA-KDSKLVQHENVT 364 (628)
Q Consensus 286 vV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~-~~~~L~~~~nvi 364 (628)
+|++|+|... +..++ ++....++++++|+|+++.+....+++.+.+. . ++....|.. +..+++...+++
T Consensus 68 vVilavp~~~-~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~-~-------~~v~~hP~~g~~~~~~~g~~~~ 137 (298)
T 2pv7_A 68 VVIVSVPINL-TLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVHT-G-------AVLGLHPMFGADIASMAKQVVV 137 (298)
T ss_dssp EEEECSCGGG-HHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS-S-------EEEEEEECSCTTCSCCTTCEEE
T ss_pred EEEEeCCHHH-HHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC-C-------CEEeeCCCCCCCchhhcCCeEE
Confidence 9999999554 55555 34455689999999999888766666665542 1 223333421 123567777899
Q ss_pred EcCCC
Q 006864 365 VTPHL 369 (628)
Q Consensus 365 lTPHi 369 (628)
+|||-
T Consensus 138 l~~~~ 142 (298)
T 2pv7_A 138 RCDGR 142 (298)
T ss_dssp EEEEE
T ss_pred EecCC
Confidence 99974
No 73
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.07 E-value=1.3e-10 Score=120.73 Aligned_cols=110 Identities=16% Similarity=0.174 Sum_probs=90.8
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcc--cCHHHHhccCCEEEEcCCCCcccccccc--H
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVEL--VSFDQALATADFISLHMPLNPTTSKIFN--D 303 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~--~sl~ell~~aDvV~l~~Plt~~t~~li~--~ 303 (628)
.++|||||+|.||+.+|+.|...|++|.+||+... .+...+.|... .++++++++||+|++++|....++.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 46899999999999999999999999999998752 23445557654 4889999999999999997656666542 4
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
+.+..++++.++||+++......+.+.+.+++..+
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 45677999999999999999999999999887654
No 74
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.05 E-value=1.4e-09 Score=111.86 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=97.2
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHc-----------C--------------Cc-ccCHHHHhc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAV-----------G--------------VE-LVSFDQALA 282 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~-----------g--------------~~-~~sl~ell~ 282 (628)
++|||||.|.||+.+|+.+...|++|++||+.... +.+.+. + +. ..+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 68999999999999999999999999999987522 222211 1 12 237889999
Q ss_pred cCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC-CeeEEEeeccCCCCCCCCCccccCC
Q 006864 283 TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG-VVAQAALDVFTEEPPAKDSKLVQHE 361 (628)
Q Consensus 283 ~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g-~i~ga~lDV~~~EP~~~~~~L~~~~ 361 (628)
+||+|+.++|.+.+.+..+-++....+++++++++.+.+- ....+.+++..+ ++ .++..|. |.+..+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~--~~~~la~~~~~~~~~--ig~h~~~--------p~~~~~ 152 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL--LPSDLVGYTGRGDKF--LALHFAN--------HVWVNN 152 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHHHHSCGGGE--EEEEECS--------STTTSC
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC--CHHHHHhhcCCCcce--EEEccCC--------CcccCc
Confidence 9999999999887677766677778899999999765553 456777777543 44 5555543 345667
Q ss_pred cEEEcCCCCCC
Q 006864 362 NVTVTPHLGAS 372 (628)
Q Consensus 362 nvilTPHig~~ 372 (628)
.+.++||-..+
T Consensus 153 lvevv~~~~t~ 163 (283)
T 4e12_A 153 TAEVMGTTKTD 163 (283)
T ss_dssp EEEEEECTTSC
T ss_pred eEEEEeCCCCC
Confidence 88999995443
No 75
>2iaf_A Hypothetical protein SDHL; MCSG, PSI2, MAD, structural genomics, L-serine dehydratase, structure initiative; 2.05A {Legionella pneumophila} SCOP: d.81.2.1 PDB: 2iqq_A
Probab=99.04 E-value=1.5e-10 Score=108.33 Aligned_cols=112 Identities=9% Similarity=-0.064 Sum_probs=80.0
Q ss_pred HHHHhHHHHHHhcCC---CCceEEEEEEeecCCCCCCCcccchHHHHHhhccccccCccc----------ccch--HhHH
Q 006864 421 AKKLGRLAVQLVSGG---SGIKSVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFIN----------LVNA--DFTA 485 (628)
Q Consensus 421 AerlG~la~qL~~g~---~~~~~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn----------lvNA--~~iA 485 (628)
+-|+|+++++++... ..++++++.++|||+ .|+++|++|+|++.||+ ++.+++++ +.++ +.+|
T Consensus 13 pmraa~~f~~~l~~~~~l~~~~~v~v~LyGSla-~TgkGHgTD~Aii~GL~-G~~pd~~~~~~~~~~~~~i~~~~~l~la 90 (151)
T 2iaf_A 13 PMLAANAFLQLLEQKNLFDKTQRVKVELYGSLA-LTGKGHGTDKAILNGLE-NKAPETVDPASMIPRMHEILDSNLLNLA 90 (151)
T ss_dssp HHHHHHHHHHHHHHTTCTTTCCEEEEEEEHHHH-HTCTTSSHHHHHHHHTT-TCCCC-----CHHHHHHHHHHHTEEEET
T ss_pred HHHHHHHHHHHHhhccccCCCcEEEEEEEchHH-hhCCCccccHHHHhhhc-CCCCCccChhhhHHHHHHHHhcCccccC
Confidence 457899899988521 158999999999999 99999999999999999 55666676 4444 4578
Q ss_pred hhcCceEE----EEEeecCCCCCCCCceEEEEEEecccccceeeCCCcE-EEEEEEEEC-CeeEE
Q 006864 486 KQKGLRIS----EERVVADSSPEFPIDSIQVQLSNVDSKFAAAVSENGE-ISIEGKVKF-GIPHL 544 (628)
Q Consensus 486 ke~GI~i~----~~~~~~~~~~~~~~ntv~v~l~~~~~~~~~~~~~~~~-~~v~Gt~~g-G~~~I 544 (628)
++++|.+. +...+.. ....|||++++++. ..++.. .++.+.|+| |.++.
T Consensus 91 ~~~~i~f~~~~di~f~~~~-~lp~HpN~m~~~a~---------~~~g~~l~~~~~ySIGGGfI~~ 145 (151)
T 2iaf_A 91 GKKEIPFHEATDFLFLQKE-LLPKHSNGMRFSAF---------DGNANLLIEQVYYSIGGGFITT 145 (151)
T ss_dssp TTEEEECCHHHHEEEETTC-CCSSCSSEEEEEEE---------CTTSCEEEEEEEEECSSSCEEE
T ss_pred CcceeEEccccceeEcCCC-CCCCCCCeeEEEEE---------eCCCCEEEEEEEEEeCCceEEE
Confidence 88887765 1111111 11269999999998 344554 589999997 66543
No 76
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.02 E-value=2.1e-10 Score=117.81 Aligned_cols=165 Identities=18% Similarity=0.214 Sum_probs=116.6
Q ss_pred CCCHhHHHhhcC-----CCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccHhHHHhcCceEEcCCCCChhhHHH
Q 006864 118 DLSPEALCEKIS-----QCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAE 192 (628)
Q Consensus 118 ~~~~~el~~~~~-----~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl~aa~~~GI~V~n~p~~~~~avAE 192 (628)
+.+++++.+.+. +++++.+. .+..++++..+ +.|.-.++...+++.++. +.|-. .|+|++..
T Consensus 48 ~~~~~~l~~~i~~l~~~~~~G~nvt--iP~k~~i~~~l-d~l~~~A~~~gavnti~~----~~g~~----~g~nTd~~-- 114 (275)
T 2hk9_A 48 EINPEELKKAFEGFKALKVKGINVT--VPFKEEIIPLL-DYVEDTAKEIGAVNTVKF----ENGKA----YGYNTDWI-- 114 (275)
T ss_dssp ECCGGGHHHHHHHHHHHTCCEEEEC--TTSTTTTGGGC-SEECHHHHHHTCCCEEEE----ETTEE----EEECCHHH--
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEC--ccCHHHHHHHH-HHhhHHHHHhCCcceEEe----eCCEE----EeecCCHH--
Confidence 456666655442 57788875 46777788776 478888888888998865 34522 35666443
Q ss_pred HHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh--hHHHHc
Q 006864 193 HGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAV 270 (628)
Q Consensus 193 ~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~ 270 (628)
+++.++.| .+.++.|++++|||.|.+|+.+|+.|...|++|.+||+.... ..+...
T Consensus 115 ---G~~~~l~~-------------------~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~ 172 (275)
T 2hk9_A 115 ---GFLKSLKS-------------------LIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 172 (275)
T ss_dssp ---HHHHHHHH-------------------HCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS
T ss_pred ---HHHHHHHH-------------------hCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc
Confidence 44444432 133578899999999999999999999999999999987422 112233
Q ss_pred CCccc-CHHHHhccCCEEEEcCCCCc--cccccccHHHHhcCCCCcEEEEcCC
Q 006864 271 GVELV-SFDQALATADFISLHMPLNP--TTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 271 g~~~~-sl~ell~~aDvV~l~~Plt~--~t~~li~~~~l~~mk~gailIN~aR 320 (628)
++... +++++++++|+|++++|... ++...+. +..++++.+++|++.
T Consensus 173 g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 173 PLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred CCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 44444 78889999999999999764 2223443 456899999999987
No 77
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.97 E-value=4.5e-09 Score=107.11 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=97.3
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCc---ccCHHHHhccCCEEEEcCCCCccccccccHHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVE---LVSFDQALATADFISLHMPLNPTTSKIFNDET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~---~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~ 305 (628)
++|+|||+|.||+.+|+.|...|++|.+||+... .+...+.|+. ..+++++ ++||+|++++|. ..+..++ ++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH-HHH
Confidence 4799999999999999999999999999998752 2334455653 2378888 999999999993 3344444 345
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCC---CCCCCCccccCCcEEEcCCCCCC
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE---PPAKDSKLVQHENVTVTPHLGAS 372 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~E---P~~~~~~L~~~~nvilTPHig~~ 372 (628)
...++++++|||++..+....+.+.+.+. ++.+. .-++..+ |......++....++++|+-+..
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~ 144 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTD 144 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECTTCC
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCCCCC
Confidence 56689999999998887777777766654 34332 2333222 32233456777789999986654
No 78
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.90 E-value=1.5e-09 Score=111.62 Aligned_cols=109 Identities=16% Similarity=0.272 Sum_probs=87.8
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCcccccccc--HHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~--~~~ 305 (628)
++|+|||+|.||+.+|+.|...|++|.+||+... .+...+.|+... +++++++++|+|++++|....++.++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 4899999999999999999999999999998752 233344466543 789999999999999996666666653 344
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
...++++.+|||++.|...+.+.|.+.+....+
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 118 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGV 118 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 567899999999999988888889998877433
No 79
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=98.89 E-value=3.4e-09 Score=117.19 Aligned_cols=120 Identities=16% Similarity=0.190 Sum_probs=95.5
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHc---CCc---ccCHHHHhc---cCCEEEEcCCCCcccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAV---GVE---LVSFDQALA---TADFISLHMPLNPTTS 298 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~---g~~---~~sl~ell~---~aDvV~l~~Plt~~t~ 298 (628)
.++|||||+|.||+.+|++|...|++|.+||+.... +...+. +.. ..+++++++ ++|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 368999999999999999999999999999998632 223332 222 247888887 5999999999876777
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE 349 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~E 349 (628)
.++ ++.+..|++|.+|||++++...+...+.+.+++..+.....-|++.+
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~ 133 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE 133 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHH
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCH
Confidence 776 56778899999999999999999999999998776654444566554
No 80
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.36 E-value=2.7e-10 Score=111.84 Aligned_cols=94 Identities=16% Similarity=0.253 Sum_probs=75.9
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHH
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l 306 (628)
+.+++|||||+|.||+.+|++|...|++|.+||+....+.....|+...++++++++||+|++++|.. .++.++ .+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~---~l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA---EL 92 (201)
Confidence 67889999999999999999999999999999987542222334555557889999999999999964 566666 24
Q ss_pred hcCCCCcEEEEcCCCchh
Q 006864 307 AKMKKGVRIVNVARGGVI 324 (628)
Q Consensus 307 ~~mk~gailIN~aRg~~v 324 (628)
..++++.+|||+++|-..
T Consensus 93 ~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 93 ADSLKGRVLIDVSNNQKM 110 (201)
Confidence 557789999999998754
No 81
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.85 E-value=2e-09 Score=108.45 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=66.4
Q ss_pred cccccccceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh---------------hH-HHHcC-CcccCHH
Q 006864 216 KWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA---------------DK-ARAVG-VELVSFD 278 (628)
Q Consensus 216 ~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---------------~~-a~~~g-~~~~sl~ 278 (628)
+|....+...++.+++|||||+|.||+.+|+.|...|++|++||+.... .. ....+ ....++.
T Consensus 6 ~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (245)
T 3dtt_A 6 IHHHHHHENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFA 85 (245)
T ss_dssp -------------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHH
T ss_pred ccccccccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHH
Confidence 4444456678999999999999999999999999999999999987432 11 11223 2345799
Q ss_pred HHhccCCEEEEcCCCCccccccccHHH-HhcCCCCcEEEEcCC
Q 006864 279 QALATADFISLHMPLNPTTSKIFNDET-FAKMKKGVRIVNVAR 320 (628)
Q Consensus 279 ell~~aDvV~l~~Plt~~t~~li~~~~-l~~mk~gailIN~aR 320 (628)
+++++||+|++++|..... ..+. +. ...+ ++.+|||++-
T Consensus 86 e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 86 DVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp HHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECCC
T ss_pred HHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECCC
Confidence 9999999999999955432 2222 22 2234 8999999993
No 82
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.85 E-value=1.7e-09 Score=118.28 Aligned_cols=104 Identities=20% Similarity=0.320 Sum_probs=80.2
Q ss_pred cCcccccccceeeecC-CeEEEEecChhHHHHHHHHHcC------CCEEEEECCC-C-ChhHHHHcCCcc-----cCHHH
Q 006864 214 AGKWLRSKYVGVSLVG-KTLAVMGFGKVGSEVARRAKGL------GMNVIAHDPY-A-PADKARAVGVEL-----VSFDQ 279 (628)
Q Consensus 214 ~g~W~~~~~~g~~l~G-ktiGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~-~-~~~~a~~~g~~~-----~sl~e 279 (628)
.|+|... .....|+| |+|||||+|.||.++|+.|+.. |++|++.++. . ..+.+.+.|+.. .++.+
T Consensus 39 ~~~w~~~-~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aE 117 (525)
T 3fr7_A 39 GGRNLFP-LLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWE 117 (525)
T ss_dssp CCGGGGG-GHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHH
T ss_pred ccccccc-cChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHH
Confidence 3456542 22457899 9999999999999999999987 9998765443 2 455677788864 58999
Q ss_pred HhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006864 280 ALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 280 ll~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 321 (628)
++++||+|++++|..... .++. +.+..||+|++| -.+-|
T Consensus 118 Aa~~ADVVILaVP~~~~~-eVl~-eI~p~LK~GaIL-s~AaG 156 (525)
T 3fr7_A 118 TVSGSDLVLLLISDAAQA-DNYE-KIFSHMKPNSIL-GLSHG 156 (525)
T ss_dssp HHHHCSEEEECSCHHHHH-HHHH-HHHHHSCTTCEE-EESSS
T ss_pred HHhcCCEEEECCChHHHH-HHHH-HHHHhcCCCCeE-EEeCC
Confidence 999999999999976553 4565 688899999995 44445
No 83
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.85 E-value=3.1e-09 Score=109.41 Aligned_cols=107 Identities=18% Similarity=0.251 Sum_probs=86.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCcccccccc--HHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~--~~~ 305 (628)
++|||||+|.||+.+|+.|...|++|.+||+... .+...+.|+... +++++++++|+|++++|....++.++. ++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999998742 222333466543 789999999999999997666666664 255
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
...++++.+||++++|...+.+.+.+.+...
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999999999877888888888764
No 84
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.84 E-value=3e-09 Score=109.14 Aligned_cols=106 Identities=19% Similarity=0.250 Sum_probs=85.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHHhccCCEEEEcCCCCccccccccH--HH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFND--ET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~-~sl~ell~~aDvV~l~~Plt~~t~~li~~--~~ 305 (628)
++|||||+|.||+.+|+.|...|++|.+|| +. ..+...+.|+.. .+++++++++|+|++++|....++.++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999999 65 333344446654 37899999999999999966655555532 44
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
...++++.+||+++.|...+.+.+.+.+.+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4568999999999999888888899988874
No 85
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.84 E-value=3.5e-09 Score=108.74 Aligned_cols=106 Identities=18% Similarity=0.312 Sum_probs=84.0
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccH--HH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND--ET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~--~~ 305 (628)
++|||||+|.||+.+|+.|...|++|.+||+... .+...+.|+... +++++++++|+|++|+|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 4799999999999999999999999999998753 233444566543 7899999999999999977666665543 24
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
+..++++.++|+++.....+.+.+.+.+.+
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 556899999999888777777777777764
No 86
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.84 E-value=3.8e-09 Score=107.91 Aligned_cols=106 Identities=13% Similarity=0.144 Sum_probs=84.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAK 308 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~ 308 (628)
++|||||+|.||+.+|+.|.. |++|.+||+.... +...+.|+...+++++++++|+|++|+|....++.++ ++....
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVA-EALYPY 79 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHH-HHHTTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHH-HHHHhh
Confidence 479999999999999999999 9999999987532 3333345544447788899999999999665566555 445567
Q ss_pred CCCCcEEEEcCCCchhcHHHHHHHHhCCC
Q 006864 309 MKKGVRIVNVARGGVIDEEALVRALDSGV 337 (628)
Q Consensus 309 mk~gailIN~aRg~~vde~aL~~aL~~g~ 337 (628)
++++.++|+++.+...+.+.+.+.+.+..
T Consensus 80 l~~~~~vv~~s~~~~~~~~~l~~~~~~~g 108 (289)
T 2cvz_A 80 LREGTYWVDATSGEPEASRRLAERLREKG 108 (289)
T ss_dssp CCTTEEEEECSCCCHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 89999999999998888889999988743
No 87
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.82 E-value=8.7e-09 Score=114.03 Aligned_cols=112 Identities=15% Similarity=0.141 Sum_probs=88.9
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHc----CCcc-cCHHHHhcc---CCEEEEcCCCCcc
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAV----GVEL-VSFDQALAT---ADFISLHMPLNPT 296 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~----g~~~-~sl~ell~~---aDvV~l~~Plt~~ 296 (628)
-+..++|||||+|.||+.+|++|...|++|.+||+.... +...+. |+.. .+++++++. ||+|++++|..+.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 355679999999999999999999999999999987522 222222 5543 378898887 9999999997667
Q ss_pred ccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 297 TSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 297 t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
++.++ ++....+++|.+|||++.|...+.+.+.+.+++..+
T Consensus 92 v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 92 TDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp HHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 77777 456677999999999999998888888888876444
No 88
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.80 E-value=7.4e-09 Score=107.64 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=85.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccH--HH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND--ET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~--~~ 305 (628)
++|||||+|.||+.+|+.|...|++|.+||+... .+...+.|+... +++++++++|+|++++|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999998753 233445566543 7889999999999999966556555433 23
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
+..++++.++|+++++.....+.+.+.+...
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 141 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSR 141 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4678999999999998887788888888643
No 89
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.77 E-value=9.8e-09 Score=103.78 Aligned_cols=102 Identities=15% Similarity=0.228 Sum_probs=80.5
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh---hHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA---DKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l 306 (628)
++|||||+|.||+.+|+.|...|++|++||+.... +...+.|+. .++++++++||+|++++|.....+.+ .+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~~ 77 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAA--RRAG 77 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHH--HHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHH--HHHH
Confidence 47999999999999999999999999999884222 223345766 77889999999999999965544443 4555
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 307 AKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 307 ~~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
..+++ ++||++.+...+.+.+.+.+...
T Consensus 78 ~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 78 RHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp TTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 66776 99999988888888888888663
No 90
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.76 E-value=2.1e-08 Score=111.33 Aligned_cols=109 Identities=14% Similarity=0.196 Sum_probs=88.5
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-----cCCcc-cCHHHHhcc---CCEEEEcCCCCcccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-----VGVEL-VSFDQALAT---ADFISLHMPLNPTTS 298 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----~g~~~-~sl~ell~~---aDvV~l~~Plt~~t~ 298 (628)
.++|||||+|.||+.+|+.|...|++|.+||+.... +...+ .|+.. .+++++++. ||+|++++|-...++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 358999999999999999999999999999998632 23333 35543 378898877 999999999766777
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
.++ ++....+++|.+|||++.+...+...+.+.+.+..+
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~ 128 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGI 128 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCC
Confidence 777 556678999999999999998888888888876433
No 91
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.75 E-value=2e-08 Score=104.22 Aligned_cols=130 Identities=16% Similarity=0.176 Sum_probs=88.1
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHc-------CCccc-CHHHHhccCCEEEEcCCCCccc
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAV-------GVELV-SFDQALATADFISLHMPLNPTT 297 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~-------g~~~~-sl~ell~~aDvV~l~~Plt~~t 297 (628)
-+.|+|||||+|.||..+|+.+. .|++|++||+... .+.+.+. ++... ++++ +++||+|+.++|-..+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 35699999999999999999999 9999999998752 2333333 34333 5666 89999999999988876
Q ss_pred cccccHHHHhcCCCCcEEE-EcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCC
Q 006864 298 SKIFNDETFAKMKKGVRIV-NVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGAS 372 (628)
Q Consensus 298 ~~li~~~~l~~mk~gailI-N~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~ 372 (628)
+..+-.+ ++.+ ++++++ |++.-.+ ..+.+.++. .....++..|. |.+ ..+-+.++|+-.++
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~~-~~r~~G~Hf~~--Pv~------~~~lveiv~g~~t~ 149 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLDS-PSRFLGVHWMN--PPH------VMPLVEIVISRFTD 149 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSSC-GGGEEEEEECS--STT------TCCEEEEEECTTCC
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhhc-ccceEeEEecC--ccc------cCCEEEEECCCCCC
Confidence 6555333 6667 998885 7776443 344444432 22235666665 432 24566677765544
No 92
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.74 E-value=1.5e-08 Score=108.11 Aligned_cols=106 Identities=21% Similarity=0.283 Sum_probs=86.0
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh--hHHHHcCCcccCHHHHhc-cCCEEEEcCCCCcccccccc
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVGVELVSFDQALA-TADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~~~~sl~ell~-~aDvV~l~~Plt~~t~~li~ 302 (628)
+|.|||++|+|+|+||+.+|++|.++|++|+++|+.... +.+.+.+.+.++.++++. +||+++.|. +.++|+
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-----~~~~I~ 244 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-----LGAVLN 244 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-----CSCCBS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-----hHHHhC
Confidence 699999999999999999999999999999999987532 223445777778888887 899998874 577888
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 303 ~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
.+.++.|+ ..+|++.+++.+.++++ .+.|+++.+
T Consensus 245 ~~~~~~lg-~~iV~e~An~p~t~~ea-~~~L~~~Gi 278 (364)
T 1leh_A 245 DFTIPQLK-AKVIAGSADNQLKDPRH-GKYLHELGI 278 (364)
T ss_dssp TTHHHHCC-CSEECCSCSCCBSSHHH-HHHHHHHTC
T ss_pred HHHHHhCC-CcEEEeCCCCCcccHHH-HHHHHhCCC
Confidence 88888885 57899999999888664 456666555
No 93
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.71 E-value=3.3e-07 Score=97.59 Aligned_cols=180 Identities=14% Similarity=0.151 Sum_probs=114.7
Q ss_pred CCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcccHhHHHhcCceEEcC---CCCC-----hhhHHHHH--HHHHH
Q 006864 130 QCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNA---PIAN-----TVAAAEHG--IALLA 199 (628)
Q Consensus 130 ~~d~liv~~~~~v~~~~l~~~~~~Lk~I~~~g~G~D~iDl~aa~~~GI~V~n~---p~~~-----~~avAE~~--l~l~L 199 (628)
++|+|+- ...+...+. ....+++.++...-..++.-.++++.++||...|. |.-. -.++++.+ ++.++
T Consensus 66 ~ad~i~~-vksP~~~~~-~~~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~ 143 (361)
T 1pjc_A 66 SREMVVK-VKEPLPAEY-DLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQF 143 (361)
T ss_dssp TSSEEEC-SSCCCGGGG-GGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHH
T ss_pred cCCeEEE-ECCCCHHHH-HhhcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHH
Confidence 6898663 333443332 22234666666656666665678888999988754 5321 13344433 34454
Q ss_pred HHHHchhHHHHHHHcC--cccccccceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCcc--
Q 006864 200 SMARNVSQADASIKAG--KWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVEL-- 274 (628)
Q Consensus 200 ~~~R~i~~~~~~~~~g--~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~-- 274 (628)
++. ++... ..| -+.. .. ..+.+++++|+|.|.+|+.+++.++.+|++|+++|++... +...+.+...
T Consensus 144 gA~-nt~~~----~~g~G~~l~-~l--~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~ 215 (361)
T 1pjc_A 144 GAR-FLERQ----QGGRGVLLG-GV--PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVE 215 (361)
T ss_dssp HHH-HTSGG----GTSCCCCTT-CB--TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSE
T ss_pred HHH-HHhhc----cCCCceecc-CC--CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeE
Confidence 432 22211 112 1111 01 2377899999999999999999999999999999987522 2333333221
Q ss_pred ------cCHHHHhccCCEEEEcCCCCc-cccccccHHHHhcCCCCcEEEEcC
Q 006864 275 ------VSFDQALATADFISLHMPLNP-TTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 275 ------~sl~ell~~aDvV~l~~Plt~-~t~~li~~~~l~~mk~gailIN~a 319 (628)
.++.+.+..+|+|+.+++... .+..++.+..++.||++.+++|++
T Consensus 216 ~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 216 LLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp EEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred eeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 245677789999999997543 234567888999999999999997
No 94
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.71 E-value=6.7e-08 Score=106.07 Aligned_cols=169 Identities=14% Similarity=0.110 Sum_probs=107.9
Q ss_pred CCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccc----cceee-ecCCeEEEEecChhHHHHHHHHHcCCCEEEE
Q 006864 183 PIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK----YVGVS-LVGKTLAVMGFGKVGSEVARRAKGLGMNVIA 257 (628)
Q Consensus 183 p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~----~~g~~-l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~ 257 (628)
.|-|-..|.|.+.+.+|. +....++|.... +.... ..=++|||||+|.||..+|..+...|++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~---------a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 12 TGENLYFQGSEVRSYLME---------AHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp TSGGGGGCBCHHHHHHHH---------TTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cccchhhhhHHHHHHHHh---------HHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 355566666777777765 233346686542 11111 1227899999999999999999999999999
Q ss_pred ECCCCCh---------hHHHHcCC-------------cc-cCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcE
Q 006864 258 HDPYAPA---------DKARAVGV-------------EL-VSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVR 314 (628)
Q Consensus 258 ~d~~~~~---------~~a~~~g~-------------~~-~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gai 314 (628)
||+.... +...+.|. .. .+++ .+++||+|+.++|-..+.+.-+-++..+.++++++
T Consensus 83 ~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aI 161 (460)
T 3k6j_A 83 VVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTCI 161 (460)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCE
T ss_pred EECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCE
Confidence 9987531 11122232 11 2564 68999999999997766655444566677999999
Q ss_pred EEEcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCC
Q 006864 315 IVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGAS 372 (628)
Q Consensus 315 lIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~ 372 (628)
|++.+++ +....+.+.+... -...++..|. |.+ . .+-+.+.|+-..+
T Consensus 162 lasnTSs--l~i~~ia~~~~~p-~r~iG~Hffn--Pv~-~-----m~LvEIv~g~~Ts 208 (460)
T 3k6j_A 162 FGTNTSS--LDLNEISSVLRDP-SNLVGIHFFN--PAN-V-----IRLVEIIYGSHTS 208 (460)
T ss_dssp EEECCSS--SCHHHHHTTSSSG-GGEEEEECCS--STT-T-----CCEEEEECCSSCC
T ss_pred EEecCCC--hhHHHHHHhccCC-cceEEEEecc--hhh-h-----CCEEEEEeCCCCC
Confidence 9755444 3345666666542 2336667676 432 2 3345677764433
No 95
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.70 E-value=3.4e-08 Score=109.04 Aligned_cols=117 Identities=11% Similarity=0.134 Sum_probs=89.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHc----CCcc-cCHHHHhcc---CCEEEEcCCCCcccccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAV----GVEL-VSFDQALAT---ADFISLHMPLNPTTSKI 300 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~----g~~~-~sl~ell~~---aDvV~l~~Plt~~t~~l 300 (628)
++|||||+|.||+.+|+.|...|++|.+||+.... +...+. |+.. .+++++++. +|+|++++|....+...
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 58999999999999999999999999999987422 222222 5543 378898876 99999999976666766
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccC
Q 006864 301 FNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFT 347 (628)
Q Consensus 301 i~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~ 347 (628)
+ ++....+++|.+||+++.|...+.+.+.+.+.+..+.....-|+.
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g 131 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSG 131 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECS
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCC
Confidence 6 455667899999999999988888888888876544333333443
No 96
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.70 E-value=5.4e-08 Score=102.18 Aligned_cols=131 Identities=18% Similarity=0.137 Sum_probs=91.2
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHH-----------HcC--------------Ccc-cCHHHHhc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKAR-----------AVG--------------VEL-VSFDQALA 282 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g--------------~~~-~sl~ell~ 282 (628)
++|||||+|.||..+|..+...|++|.+||+.... +.+. +.| +.. .+++++++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav~ 86 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVE 86 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTT
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHHh
Confidence 68999999999999999999999999999987522 2221 123 122 37899999
Q ss_pred cCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC-CeeEEEeeccCCCCCCCCCccccCC
Q 006864 283 TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG-VVAQAALDVFTEEPPAKDSKLVQHE 361 (628)
Q Consensus 283 ~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g-~i~ga~lDV~~~EP~~~~~~L~~~~ 361 (628)
+||+|+.++|-..+.+.-+-++....++++++|++++.+ +....+.+.+... ++ .+...|. |+. ..+
T Consensus 87 ~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~~~r~--ig~Hp~~--P~~------~~~ 154 (319)
T 2dpo_A 87 GVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAHVKQC--IVAHPVN--PPY------YIP 154 (319)
T ss_dssp TEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTTGGGE--EEEEECS--STT------TCC
T ss_pred cCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCCCCCe--EEeecCC--chh------hcc
Confidence 999999999977665554445666778999999877665 3445666666542 34 4444443 321 234
Q ss_pred cEEEcCCCCCC
Q 006864 362 NVTVTPHLGAS 372 (628)
Q Consensus 362 nvilTPHig~~ 372 (628)
-+.++|+-.++
T Consensus 155 lveiv~g~~t~ 165 (319)
T 2dpo_A 155 LVELVPHPETS 165 (319)
T ss_dssp EEEEEECTTCC
T ss_pred eEEEeCCCCCC
Confidence 46677875544
No 97
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.69 E-value=3.4e-08 Score=109.33 Aligned_cols=117 Identities=15% Similarity=0.156 Sum_probs=89.8
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-----cCCcc-cCHHHHhc---cCCEEEEcCCCCccccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-----VGVEL-VSFDQALA---TADFISLHMPLNPTTSK 299 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----~g~~~-~sl~ell~---~aDvV~l~~Plt~~t~~ 299 (628)
++|||||+|.||+.+|..|...|++|.+||+.... +...+ .++.. .+++++++ ++|+|++++|....++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 47999999999999999999999999999987532 23333 45543 37888874 89999999997666777
Q ss_pred cccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccC
Q 006864 300 IFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFT 347 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~ 347 (628)
++ ++....+++|.+||+++.|...+...+.+.+.+..+.....-|+.
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g 129 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSG 129 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCC
Confidence 66 355667999999999999988888888888876444333334444
No 98
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.65 E-value=8.3e-08 Score=105.71 Aligned_cols=134 Identities=16% Similarity=0.179 Sum_probs=92.3
Q ss_pred CeEEEEecChhHHHHHHHHHcC--CCEEEEECCCCChhHH----------------HH----cCCcc-cCHHHHhccCCE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL--GMNVIAHDPYAPADKA----------------RA----VGVEL-VSFDQALATADF 286 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~a----------------~~----~g~~~-~sl~ell~~aDv 286 (628)
++|+|||+|.||..+|..|... |++|++||+....... .. .++.. .++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999877 8999999986421111 00 13333 368889999999
Q ss_pred EEEcCCCCcccccc-----------c--cHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEee---ccCCCC
Q 006864 287 ISLHMPLNPTTSKI-----------F--NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALD---VFTEEP 350 (628)
Q Consensus 287 V~l~~Plt~~t~~l-----------i--~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lD---V~~~EP 350 (628)
|++|+|......+. . -+.....|++|+++|++++..+-..+.+.+.+++... .++| ++..|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~--~~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTK--PNLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCC--TTCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCC--CCCCeEEEeCHHH
Confidence 99999954433321 1 1234557899999999999888888888888876532 1223 355665
Q ss_pred CCCCC---ccccCCcEEE
Q 006864 351 PAKDS---KLVQHENVTV 365 (628)
Q Consensus 351 ~~~~~---~L~~~~nvil 365 (628)
..... .++..+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 54333 2456667764
No 99
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.65 E-value=3.3e-08 Score=97.57 Aligned_cols=94 Identities=14% Similarity=0.222 Sum_probs=71.6
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHH
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l 306 (628)
.+++|+|||+|.||+.+|+.|...|++|.++|+.... +...+.|+...+++++++++|+|++++|. .....++. +
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~-~~~~~v~~---l 102 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFR-EHYSSLCS---L 102 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCG-GGSGGGGG---G
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCCh-HHHHHHHH---H
Confidence 4579999999999999999999999999999987421 22222366556888999999999999994 44555553 4
Q ss_pred hcCCCCcEEEEcCCCchhc
Q 006864 307 AKMKKGVRIVNVARGGVID 325 (628)
Q Consensus 307 ~~mk~gailIN~aRg~~vd 325 (628)
+.+.+++++|++++|.-.+
T Consensus 103 ~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp HHHHTTCEEEECCCCCHHH
T ss_pred HHhcCCCEEEEeCCCcccc
Confidence 3334899999999987654
No 100
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.63 E-value=7.3e-08 Score=106.53 Aligned_cols=117 Identities=13% Similarity=0.182 Sum_probs=88.9
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHH-HcC-------Ccc-cCHHHHhcc---CCEEEEcCCCCcc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKAR-AVG-------VEL-VSFDQALAT---ADFISLHMPLNPT 296 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~g-------~~~-~sl~ell~~---aDvV~l~~Plt~~ 296 (628)
++|||||+|.||+.+|..|...|++|.+||+.... +... ..| +.. .+++++++. +|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 47999999999999999999999999999987422 2222 224 332 378888874 9999999997666
Q ss_pred ccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEeeccC
Q 006864 297 TSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFT 347 (628)
Q Consensus 297 t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~lDV~~ 347 (628)
++..+ ++....+++|.+||+++.|...+.+.+.+.+.+..+.....-|+.
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~g 131 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISG 131 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEES
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccC
Confidence 66666 455667899999999999988888888888887544333334443
No 101
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.59 E-value=6.4e-08 Score=95.19 Aligned_cols=81 Identities=15% Similarity=0.292 Sum_probs=62.4
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccH
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
..++.+++|+|||+|.||+.+|+.|...|++|.+||+... .+++||+|++++| .+.++.++.
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----------------~~~~aD~vi~av~-~~~~~~v~~- 75 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----------------ATTLGEIVIMAVP-YPALAALAK- 75 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----------------CSSCCSEEEECSC-HHHHHHHHH-
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----------------HhccCCEEEEcCC-cHHHHHHHH-
Confidence 3578899999999999999999999999999999998643 4578999999999 555665553
Q ss_pred HHHhcCCCCcEEEEcCCCch
Q 006864 304 ETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~~ 323 (628)
+....++ ++++|++++|--
T Consensus 76 ~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 76 QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp HTHHHHT-TSEEEECCCCBC
T ss_pred HHHHhcC-CCEEEEECCCCC
Confidence 3344577 999999998654
No 102
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.58 E-value=3.3e-08 Score=100.12 Aligned_cols=108 Identities=10% Similarity=0.147 Sum_probs=77.9
Q ss_pred ceeeecCCeEEEEecChhHHHHHHHHHcCCCE-EEEECCCCCh-hHH-HHcCCccc-CHHHHhccCCEEEEcCCCCcccc
Q 006864 223 VGVSLVGKTLAVMGFGKVGSEVARRAKGLGMN-VIAHDPYAPA-DKA-RAVGVELV-SFDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~-V~~~d~~~~~-~~a-~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~ 298 (628)
+..++.+++|||||+|.||+.+|+.|...|++ |.+||+.... +.. ...|+... ++++++++||+|++++|.. ...
T Consensus 4 m~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~ 82 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFA 82 (266)
T ss_dssp ---CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHH
T ss_pred hhcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHH
Confidence 34456678999999999999999999988998 8999987422 222 23366543 7889999999999999944 334
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHh
Q 006864 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALD 334 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~ 334 (628)
.++ ++....+++++++|+++.|...+. +.+.+.
T Consensus 83 ~v~-~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~ 115 (266)
T 3d1l_A 83 ELL-QGIVEGKREEALMVHTAGSIPMNV--WEGHVP 115 (266)
T ss_dssp HHH-HHHHTTCCTTCEEEECCTTSCGGG--STTTCS
T ss_pred HHH-HHHHhhcCCCcEEEECCCCCchHH--HHHHHH
Confidence 444 344456889999999998876543 444443
No 103
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.56 E-value=4.2e-08 Score=100.65 Aligned_cols=91 Identities=22% Similarity=0.410 Sum_probs=72.2
Q ss_pred CeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHh
Q 006864 230 KTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (628)
Q Consensus 230 ktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~ 307 (628)
++|||||+ |.||+.+|+.|...|++|++||+... .+...+.|+...++.+++++||+|++++|... +..++ ++...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~~ 89 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI-IEKVA-EDIVP 89 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHHH
Confidence 58999999 99999999999999999999998742 23334456655577889999999999999543 44444 34555
Q ss_pred cCCCCcEEEEcCCCc
Q 006864 308 KMKKGVRIVNVARGG 322 (628)
Q Consensus 308 ~mk~gailIN~aRg~ 322 (628)
.++++++||+++.|.
T Consensus 90 ~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 90 RVRPGTIVLILDAAA 104 (286)
T ss_dssp GSCTTCEEEESCSHH
T ss_pred hCCCCCEEEECCCCc
Confidence 689999999988765
No 104
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.56 E-value=3.7e-07 Score=91.65 Aligned_cols=103 Identities=19% Similarity=0.297 Sum_probs=75.1
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC----EEEEECCCCCh-hHH-HHcCCccc-CHHHHhccCCEEEEcCCCCcccccccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM----NVIAHDPYAPA-DKA-RAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~----~V~~~d~~~~~-~~a-~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~ 302 (628)
++|||||+|+||+.+|+.|...|+ +|.+||+.... +.. ...|+... ++++++++||+|++++|.. ....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~-~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPD-LYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTT-THHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHH-HHHHHH-
Confidence 689999999999999999999998 99999987522 222 34577654 8899999999999999732 334444
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 303 ~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
++....++++.++|.+.-|- ..+.+.+.+..+
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~~ 112 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNKK 112 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCSC
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCCC
Confidence 34445678999999776543 345666666543
No 105
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.55 E-value=1.1e-07 Score=87.56 Aligned_cols=87 Identities=16% Similarity=0.197 Sum_probs=69.1
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh--hHHHHcCCc---ccCHHHHhccCCEEEEcCCCCccccccccH
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVGVE---LVSFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~~---~~sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
|++++|||.|.||+.+++.|+.+|++|.++|+.... ..+...+.. ..+++++++++|+|+.++|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 899999999999999999999999999999987532 224455553 237899999999999999965 334444
Q ss_pred HHHhcCCCCcEEEEcCCC
Q 006864 304 ETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg 321 (628)
+.+++|.+++|++..
T Consensus 98 ---~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNP 112 (144)
T ss_dssp ---GGCCTTCEEEECCSS
T ss_pred ---HHcCCCCEEEEccCC
Confidence 457889999999864
No 106
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.50 E-value=3.4e-07 Score=99.83 Aligned_cols=115 Identities=15% Similarity=0.113 Sum_probs=81.8
Q ss_pred cceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH------------------cCCcc-cCHHHHh
Q 006864 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA------------------VGVEL-VSFDQAL 281 (628)
Q Consensus 222 ~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~------------------~g~~~-~sl~ell 281 (628)
.++++..-++|+|||+|.+|..+|..|.. |++|++||+.... +...+ .++.. .++++.+
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~ 107 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAY 107 (432)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH
T ss_pred ccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHH
Confidence 34666777899999999999999999988 9999999987422 11111 12333 3788999
Q ss_pred ccCCEEEEcCCCCccc-------ccccc--HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 282 ATADFISLHMPLNPTT-------SKIFN--DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 282 ~~aDvV~l~~Plt~~t-------~~li~--~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
++||+|++++|...+. ..+.. +.... |++|+++|+.+.-.+-..+.+.+.+.+..+
T Consensus 108 ~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 108 RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 9999999999954321 12221 34455 999999999999888888888888877544
No 107
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.49 E-value=6.9e-07 Score=92.37 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=84.2
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHH-----------HHcC------------------Cc-ccCHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKA-----------RAVG------------------VE-LVSFD 278 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~g------------------~~-~~sl~ 278 (628)
++|+|||+|.||..+|..|...|++|++||+.... +.+ .+.| +. ..+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 68999999999999999999999999999987421 111 0112 12 23688
Q ss_pred HHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC-CeeEEEeeccCCCCCCCCCcc
Q 006864 279 QALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG-VVAQAALDVFTEEPPAKDSKL 357 (628)
Q Consensus 279 ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g-~i~ga~lDV~~~EP~~~~~~L 357 (628)
+.+++||+|++++|-..+.+.-+-++....++++++|+....|- ....+.+.+... ++ .+.+.+. |..
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~~~~--~g~h~~~--P~~----- 164 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQDRF--AGLHFFN--PVP----- 164 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCGGGE--EEEEECS--STT-----
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCcccE--EEEecCC--Ccc-----
Confidence 88999999999999665443333344445688999998655553 334566655432 34 4445444 321
Q ss_pred ccCCcEEEcCCCCC
Q 006864 358 VQHENVTVTPHLGA 371 (628)
Q Consensus 358 ~~~~nvilTPHig~ 371 (628)
..+.+.+.++...
T Consensus 165 -~~~~~~i~~g~~~ 177 (302)
T 1f0y_A 165 -VMKLVEVIKTPMT 177 (302)
T ss_dssp -TCCEEEEECCTTC
T ss_pred -cCceEEEeCCCCC
Confidence 2345556665443
No 108
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.42 E-value=7.7e-07 Score=89.59 Aligned_cols=101 Identities=13% Similarity=0.213 Sum_probs=75.8
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHH-HHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKA-RAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETF 306 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l 306 (628)
++|||||+|.||+.+++.|...|.+|.+||+.... +.. ...|+... +++++++++|+|++++| .... .+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHH
Confidence 58999999999999999999999999999987422 222 23476544 78999999999999999 3332 3445
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHHHHhCC-Ce
Q 006864 307 AKMKKGVRIVNVARGGVIDEEALVRALDSG-VV 338 (628)
Q Consensus 307 ~~mk~gailIN~aRg~~vde~aL~~aL~~g-~i 338 (628)
..+++|.++|++..|-- .+.+.+.+..+ ++
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~~~~ 108 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQDLPL 108 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTTSCE
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCCCCE
Confidence 55778999999976543 34567777654 44
No 109
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.42 E-value=3.2e-07 Score=96.02 Aligned_cols=104 Identities=19% Similarity=0.295 Sum_probs=78.1
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCC----CEEEEECCCCC---hhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLG----MNVIAHDPYAP---ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSK 299 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G----~~V~~~d~~~~---~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~ 299 (628)
..++|||||+|.||..+|..|...| .+|.+||+... .+...+.|+... +..+++++||+|++++| ......
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~ 99 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPF 99 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHH
Confidence 3468999999999999999999888 79999998763 233445677655 78899999999999999 444444
Q ss_pred cccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 300 IFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
++ .+....++++.+||+++-|-- .+.+.+.+.+
T Consensus 100 vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 100 IL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 44 344456889999999976543 3456666654
No 110
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.40 E-value=9.8e-07 Score=90.64 Aligned_cols=109 Identities=14% Similarity=0.175 Sum_probs=79.7
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCC---EEEEECCCCCh-hHHHH-cCCccc-CHHHHhccCCEEEEcCCCCcccccccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGM---NVIAHDPYAPA-DKARA-VGVELV-SFDQALATADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~---~V~~~d~~~~~-~~a~~-~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~ 302 (628)
.++|||||+|+||+.+|+.|...|+ +|.+||++... +...+ .|+... +..+++++||+|++++|- .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4789999999999999999999898 89999998632 22333 477655 789999999999999983 2333333
Q ss_pred HHHHhc-CCCCcEEEEcCCCchhcHHHHHHHHhCC-CeeEE
Q 006864 303 DETFAK-MKKGVRIVNVARGGVIDEEALVRALDSG-VVAQA 341 (628)
Q Consensus 303 ~~~l~~-mk~gailIN~aRg~~vde~aL~~aL~~g-~i~ga 341 (628)
++.-.. ++++.+||+++-|- ..+.|.+.+..+ ++.++
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGV--TTPLIEKWLGKASRIVRA 119 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTCCSSEEEE
T ss_pred HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCCCCeEEEE
Confidence 333334 68888999887554 346777788653 55444
No 111
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.39 E-value=8.6e-07 Score=96.68 Aligned_cols=106 Identities=15% Similarity=0.183 Sum_probs=76.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-------------------cC-Ccc-cCHHHHhccCCEE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-------------------VG-VEL-VSFDQALATADFI 287 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-------------------~g-~~~-~sl~ell~~aDvV 287 (628)
++|+|||+|.||..+|..|...|++|++||+.... +...+ .| +.. .++++++++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 47999999999999999999999999999986422 11111 22 222 3688889999999
Q ss_pred EEcCCCCcccccccc--------HHHHhcCCC---CcEEEEcCCCchhc-HHHHHHHHhC
Q 006864 288 SLHMPLNPTTSKIFN--------DETFAKMKK---GVRIVNVARGGVID-EEALVRALDS 335 (628)
Q Consensus 288 ~l~~Plt~~t~~li~--------~~~l~~mk~---gailIN~aRg~~vd-e~aL~~aL~~ 335 (628)
++|+|...+..+..+ ++....|++ +.++|+++...+-. .+.+.+.+++
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999996554222221 334455888 99999998766655 6667777765
No 112
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.34 E-value=3.3e-07 Score=92.36 Aligned_cols=101 Identities=18% Similarity=0.269 Sum_probs=72.8
Q ss_pred CeEEEEecChhHHHHHHHHHcCC-CEEEEECCCCCh-hHHH-HcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLG-MNVIAHDPYAPA-DKAR-AVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDET 305 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~~-~~a~-~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~ 305 (628)
++|||||+|.||+.+|+.|...| .+|.+||+.... +... ..|+... ++++++ +||+|++++| ....+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---- 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---- 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH----
Confidence 47999999999999999999889 999999987422 2222 2476544 677788 9999999999 44443333
Q ss_pred HhcCC-CCcEEEEcCCCchhcHHHHHHHHhCC-Cee
Q 006864 306 FAKMK-KGVRIVNVARGGVIDEEALVRALDSG-VVA 339 (628)
Q Consensus 306 l~~mk-~gailIN~aRg~~vde~aL~~aL~~g-~i~ 339 (628)
..++ ++.++|+++.|--. +.+.+.+..+ ++.
T Consensus 75 -~~l~~~~~ivv~~~~g~~~--~~l~~~~~~~~~~v 107 (263)
T 1yqg_A 75 -KNIRTNGALVLSVAAGLSV--GTLSRYLGGTRRIV 107 (263)
T ss_dssp -TTCCCTTCEEEECCTTCCH--HHHHHHTTSCCCEE
T ss_pred -HHhccCCCEEEEecCCCCH--HHHHHHcCCCCcEE
Confidence 3332 28999999655433 6777777764 443
No 113
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.32 E-value=1.6e-06 Score=96.00 Aligned_cols=130 Identities=23% Similarity=0.219 Sum_probs=86.3
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-----------cCC-------------cc-cCHHHHhc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-----------VGV-------------EL-VSFDQALA 282 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~g~-------------~~-~sl~ell~ 282 (628)
-++|||||+|.||..+|..+...|++|++||+.... +.+.+ .|. .. .+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 368999999999999999999999999999987522 22111 221 11 2454 689
Q ss_pred cCCEEEEcCCCCccccccccHHHHhcCCCCcEEE-EcCCCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCC
Q 006864 283 TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIV-NVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHE 361 (628)
Q Consensus 283 ~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailI-N~aRg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~ 361 (628)
+||+|+.++|-..+.+.-+-++..+.++++++|+ |++.-. ...+.+.+... -...++..|..-|. . +
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~---i~~ia~~~~~p-~~~ig~hf~~Pa~v---~-----~ 151 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS---ITAIAAEIKNP-ERVAGLHFFNPAPV---M-----K 151 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSC---HHHHTTTSSSG-GGEEEEEECSSTTT---C-----C
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCC---HHHHHHHccCc-cceEEeeecChhhh---C-----C
Confidence 9999999999776555444455667799999994 666433 34556665432 22366676664432 1 4
Q ss_pred cEEEcCCCCC
Q 006864 362 NVTVTPHLGA 371 (628)
Q Consensus 362 nvilTPHig~ 371 (628)
-+.+.|+-..
T Consensus 152 Lvevv~g~~T 161 (483)
T 3mog_A 152 LVEVVSGLAT 161 (483)
T ss_dssp EEEEEECSSC
T ss_pred eEEEecCCCC
Confidence 4666666543
No 114
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.31 E-value=7.5e-07 Score=92.98 Aligned_cols=90 Identities=21% Similarity=0.179 Sum_probs=69.3
Q ss_pred cCCeEEEEecChhHHHHHHHHHc-CCC-EEEEECCCCCh-h-HHHHcC--Ccc-cCHHHHhccCCEEEEcCCCCcccccc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKG-LGM-NVIAHDPYAPA-D-KARAVG--VEL-VSFDQALATADFISLHMPLNPTTSKI 300 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~-~G~-~V~~~d~~~~~-~-~a~~~g--~~~-~sl~ell~~aDvV~l~~Plt~~t~~l 300 (628)
.+++|||||+|.+|+.+++.+.. +|. +|.+||+.... + .....+ +.. .++++++++||+|++++|. +..+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcc
Confidence 46799999999999999999865 487 89999987522 2 223335 443 3799999999999999994 3556
Q ss_pred ccHHHHhcCCCCcEEEEcCCCch
Q 006864 301 FNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 301 i~~~~l~~mk~gailIN~aRg~~ 323 (628)
+.. +.+++|.+|++++....
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCST
T ss_pred cCH---HHcCCCcEEEeCCCCCC
Confidence 654 56899999999976554
No 115
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.29 E-value=1e-06 Score=88.27 Aligned_cols=133 Identities=13% Similarity=0.169 Sum_probs=84.8
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAK 308 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~ 308 (628)
-++|||||+|+||.++|+.|+..|++|.+||+. ++ +++|| ++++|.. ....++ .+....
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~----------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~ 64 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP----------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAF 64 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG----------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH----------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHh
Confidence 368999999999999999999999999999972 12 57899 8899965 455554 445556
Q ss_pred CCCCcEEEEcC-CCchhcHHHHHHHHhCCCeeEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHH
Q 006864 309 MKKGVRIVNVA-RGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEA 387 (628)
Q Consensus 309 mk~gailIN~a-Rg~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig~~T~ea~~~~~~~~~~~ 387 (628)
+++|+++++|+ .-+.-..+ .+...|.. ..+ .||++..+.++.++ ..+ +...++.
T Consensus 65 l~~g~ivvd~sgs~~~~vl~---~~~~~g~~-fvg-----------~HPm~g~~~~i~a~-----d~~-----a~~~l~~ 119 (232)
T 3dfu_A 65 ARRGQMFLHTSLTHGITVMD---PLETSGGI-VMS-----------AHPIGQDRWVASAL-----DEL-----GETIVGL 119 (232)
T ss_dssp CCTTCEEEECCSSCCGGGGH---HHHHTTCE-EEE-----------EEEEETTEEEEEES-----SHH-----HHHHHHH
T ss_pred cCCCCEEEEECCcCHHHHHH---HHHhCCCc-EEE-----------eeeCCCCceeeeCC-----CHH-----HHHHHHH
Confidence 89999999974 32221111 22233321 111 24566666666655 222 2445566
Q ss_pred HHHHHcCCCCCCcccCCCCCccccccc
Q 006864 388 VVGALRGELSATAINAPMVPSEVLSEL 414 (628)
Q Consensus 388 i~~~l~g~~~~~~vn~p~~~~~~~~~~ 414 (628)
+...+.++.. .++++.++..
T Consensus 120 L~~~lG~~vv-------~~~~~~hd~~ 139 (232)
T 3dfu_A 120 LVGELGGSIV-------EIADDKRAQL 139 (232)
T ss_dssp HHHHTTCEEC-------CCCGGGHHHH
T ss_pred HHHHhCCEEE-------EeCHHHHhHH
Confidence 6666655544 4556665544
No 116
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.29 E-value=6e-06 Score=84.88 Aligned_cols=81 Identities=21% Similarity=0.285 Sum_probs=68.4
Q ss_pred ceeeecCCeEEEEecCh-hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccc
Q 006864 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li 301 (628)
.+.+++||++.|||.|. +|+.+|..|.+.|+.|...+++. .+|++.+++||+|+.+++. .+++
T Consensus 154 ~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~I 217 (285)
T 3p2o_A 154 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------KDLSLYTRQADLIIVAAGC----VNLL 217 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHTTCSEEEECSSC----TTCB
T ss_pred hCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhhcCCEEEECCCC----CCcC
Confidence 35789999999999998 69999999999999999998642 2688999999999999983 3456
Q ss_pred cHHHHhcCCCCcEEEEcCCCc
Q 006864 302 NDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aRg~ 322 (628)
..+. +|+|+++||++.-.
T Consensus 218 ~~~~---vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 218 RSDM---VKEGVIVVDVGINR 235 (285)
T ss_dssp CGGG---SCTTEEEEECCCEE
T ss_pred CHHH---cCCCeEEEEeccCc
Confidence 6644 59999999999655
No 117
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.25 E-value=3.4e-06 Score=92.40 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=76.9
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcC---------------------Ccc-cCHHHHhccCCEE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVG---------------------VEL-VSFDQALATADFI 287 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g---------------------~~~-~sl~ell~~aDvV 287 (628)
-+|+|||+|.+|..+|..|...|++|++||+....-.....+ +.. .++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 479999999999999999999999999999875322111111 223 3788999999999
Q ss_pred EEcCCCCcc----------ccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 288 SLHMPLNPT----------TSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 288 ~l~~Plt~~----------t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
++|+|...+ .+..+ +.....|++|.++|+++.-.+-..+.+.+.+.+
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999985432 11121 455678999999999986665556666666654
No 118
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.23 E-value=1.6e-06 Score=87.15 Aligned_cols=98 Identities=16% Similarity=0.264 Sum_probs=69.3
Q ss_pred CCeEEEEecChhHHHHHHHHHcCC----CEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccH
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLG----MNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G----~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
.++|||||+|.||+.+|+.|...| .+|.+||+.... .|+... ++++++++||+|++++| ....+.++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~- 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN- 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-
Confidence 468999999999999999998888 689999987543 466554 78899999999999999 444444442
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
+....++ +..+|.+..| ++.+.+.+.+..+
T Consensus 77 ~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 77 NIKPYLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp HSGGGCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred HHHHhcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 3334454 4445554433 2334666666654
No 119
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.23 E-value=4.1e-06 Score=92.13 Aligned_cols=131 Identities=20% Similarity=0.242 Sum_probs=84.6
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-----------cC-----------Cc-ccCHHHHhccC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-----------VG-----------VE-LVSFDQALATA 284 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~g-----------~~-~~sl~ell~~a 284 (628)
=++|||||+|.||..+|..+...|++|++||+.... +.+.+ .| .. ..++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 368999999999999999999999999999987421 11111 11 01 1255 568899
Q ss_pred CEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC-CCeeEEEeeccCCCCCCCCCccccCCcE
Q 006864 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVFTEEPPAKDSKLVQHENV 363 (628)
Q Consensus 285 DvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~-g~i~ga~lDV~~~EP~~~~~~L~~~~nv 363 (628)
|+|+.++|-..+.+.-+-++....++++++|+....+- ....+.+.++. .++ .+.+.|. |.+ ..+.+
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~--~~~~la~~~~~~~~~--ig~hf~~--P~~------~~~lv 183 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDRPQLV--IGTHFFS--PAH------VMRLL 183 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSCGGGE--EEEEECS--STT------TCCEE
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCc--CHHHHHHHhcCCcce--EEeecCC--Ccc------cceeE
Confidence 99999999654333333344556689999999744333 33466666643 244 5556663 321 23456
Q ss_pred EEcCCCCCC
Q 006864 364 TVTPHLGAS 372 (628)
Q Consensus 364 ilTPHig~~ 372 (628)
.+.++..++
T Consensus 184 evv~g~~t~ 192 (463)
T 1zcj_A 184 EVIPSRYSS 192 (463)
T ss_dssp EEEECSSCC
T ss_pred EEeCCCCCC
Confidence 666666554
No 120
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.22 E-value=2.9e-06 Score=93.10 Aligned_cols=105 Identities=22% Similarity=0.223 Sum_probs=75.5
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-------------------cC-Ccc-cCHHHHhccCCEE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-------------------VG-VEL-VSFDQALATADFI 287 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-------------------~g-~~~-~sl~ell~~aDvV 287 (628)
++|+|||+|.+|..+|..|...|++|++||+.... +...+ .+ +.. .++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 58999999999999999999999999999987422 11111 11 222 3788899999999
Q ss_pred EEcCCCCcc---------ccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 288 SLHMPLNPT---------TSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 288 ~l~~Plt~~---------t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
++|+|...+ .+..+ +.....++++.++|+++.-.+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 999995532 22222 445567899999999996555455556665544
No 121
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.20 E-value=1.2e-06 Score=85.21 Aligned_cols=114 Identities=16% Similarity=0.213 Sum_probs=79.2
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCCh-hHH-HHcC-------CcccCHHHHhccCCEEEEcCCCCccccc
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPA-DKA-RAVG-------VELVSFDQALATADFISLHMPLNPTTSK 299 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-~~~g-------~~~~sl~ell~~aDvV~l~~Plt~~t~~ 299 (628)
++|+|+| .|.||+.+++.|...|++|.++|+.... +.. ...+ +...+++++++++|+|++++|. ..++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~-~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPW-EHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCH-HHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCCh-hhHHH
Confidence 4799999 9999999999999999999999986422 111 1112 3334788899999999999993 33443
Q ss_pred cccHHHHhcCCCCcEEEEcCCCchhc------------HHHHHHHHhCCCeeEEEeeccCCCC
Q 006864 300 IFNDETFAKMKKGVRIVNVARGGVID------------EEALVRALDSGVVAQAALDVFTEEP 350 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~aRg~~vd------------e~aL~~aL~~g~i~ga~lDV~~~EP 350 (628)
++. +....++ +.++|+++.|--.+ .+.+.+.+...++ ++.+.+.|
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----v~~~~~~~ 136 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKV----VSALHTIP 136 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSCE----EECCTTCC
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCCeE----EEEccchH
Confidence 332 2333454 89999999865432 5677777764343 46666655
No 122
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.19 E-value=3.6e-06 Score=88.30 Aligned_cols=103 Identities=22% Similarity=0.227 Sum_probs=72.7
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHc-CC--------------c-ccCHHHHhccCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAV-GV--------------E-LVSFDQALATADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~-g~--------------~-~~sl~ell~~aDvV~l~~P 292 (628)
++|+|||+|.||..+|..|...|++|.+||++.. .+...+. +. . ..+++++++.+|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999999999998742 2222222 21 1 2378888999999999999
Q ss_pred CCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 293 LNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
... +..++ +.....+++++++|++ -|.......+.+.+..
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 554 34443 4455668999999999 4412233334555543
No 123
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.13 E-value=2.2e-06 Score=87.95 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=74.5
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcc-------------cCHHHHhc---cCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVEL-------------VSFDQALA---TADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~-------------~sl~ell~---~aDvV~l~~P 292 (628)
++|+|||+|.||+.+|..|...|.+|.+||+... .+...+.|... .+.+++.+ ++|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5899999999999999999999999999998642 22233334321 23445544 8999999999
Q ss_pred CCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCee
Q 006864 293 LNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 339 (628)
- ..+..++ ++....++++.++|++..| +-..+.+.+.+...++.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g-~~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNG-LGHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSS-SCTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCC-CCcHHHHHHHcCCccEE
Confidence 3 3444443 3344568899999999764 33456666667655554
No 124
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.11 E-value=4.1e-06 Score=82.72 Aligned_cols=108 Identities=18% Similarity=0.249 Sum_probs=73.2
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEE-ECCCCCh-h-HHHHcCCcc-cCHHHHhccCCEEEEcCCCCccccccccHH
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPYAPA-D-KARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDE 304 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~-~-~a~~~g~~~-~sl~ell~~aDvV~l~~Plt~~t~~li~~~ 304 (628)
-++|||||+|.||+.+|+.|...|++|.+ ||+.... + .+...|+.. .+..+.++++|+|++++|.. ....++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~-- 99 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYD-SIADIVT-- 99 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGG-GHHHHHT--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChH-HHHHHHH--
Confidence 36899999999999999999999999999 9987532 2 233456543 35556689999999999932 2222221
Q ss_pred HHhcCCCCcEEEEcCCCch------------hcHHHHHHHHhCCCeeE
Q 006864 305 TFAKMKKGVRIVNVARGGV------------IDEEALVRALDSGVVAQ 340 (628)
Q Consensus 305 ~l~~mk~gailIN~aRg~~------------vde~aL~~aL~~g~i~g 340 (628)
.+.. .++.++|+++-|-- ...+.+.+.+...++..
T Consensus 100 ~l~~-~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv~ 146 (220)
T 4huj_A 100 QVSD-WGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVVK 146 (220)
T ss_dssp TCSC-CTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEEE
T ss_pred Hhhc-cCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEEE
Confidence 1122 35889999985431 14566777776545543
No 125
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.09 E-value=7.9e-06 Score=88.20 Aligned_cols=106 Identities=14% Similarity=0.130 Sum_probs=76.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCC------------------cc-cCHHHHhccCCEEEE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGV------------------EL-VSFDQALATADFISL 289 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~------------------~~-~sl~ell~~aDvV~l 289 (628)
++|+|||+|.||..+|..|.. |++|++||+.... +...+.+. .. .++.+.+++||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999998 9999999986422 22222222 22 257788899999999
Q ss_pred cCCCCcc----------ccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 290 HMPLNPT----------TSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 290 ~~Plt~~----------t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
++|.... ....+ +.... ++++.++|+.+.-++-..+.+.+.+....+
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v 136 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDRI 136 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSCE
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCeE
Confidence 9996531 22222 33445 899999999877777777788887766544
No 126
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.09 E-value=8.6e-06 Score=89.99 Aligned_cols=106 Identities=14% Similarity=0.079 Sum_probs=74.1
Q ss_pred CeEEEEecChhHHHHHHHHHcC--CCEEEEECCCCChhHHHHc--------------------CCcc-cCHHHHhccCCE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL--GMNVIAHDPYAPADKARAV--------------------GVEL-VSFDQALATADF 286 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~--------------------g~~~-~sl~ell~~aDv 286 (628)
++|+|||+|.||..+|..|... |++|++||+.......... ++.. .++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999876 7999999976421111111 1222 256788899999
Q ss_pred EEEcCCCCccc-----------cccc--cHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 287 ISLHMPLNPTT-----------SKIF--NDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 287 V~l~~Plt~~t-----------~~li--~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
|++|+|..... ..+. -+.....++++.+||+++.-.+-..+.+.+.+.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 99999854321 0111 1344567999999999886666556667777765
No 127
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.06 E-value=4.9e-06 Score=86.50 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=71.9
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECC--CCC-hhHHHHcCC-----------ccc---CHHHHhccCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDP--YAP-ADKARAVGV-----------ELV---SFDQALATADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~--~~~-~~~a~~~g~-----------~~~---sl~ell~~aDvV~l~~P 292 (628)
++|+|||+|.||+.+|..|...|++|.+||+ ... .+...+.+. ... ++.+.++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999988999999998 532 222233332 222 57788899999999999
Q ss_pred CCccccccccHHHHhcCCCCcEEEEcCCCc---h-hcHHHHHHHHhC
Q 006864 293 LNPTTSKIFNDETFAKMKKGVRIVNVARGG---V-IDEEALVRALDS 335 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~gailIN~aRg~---~-vde~aL~~aL~~ 335 (628)
-. .+..++ ..... ++++.++|++..|- - -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 44 344443 33445 78899999998764 1 122345555554
No 128
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.03 E-value=9.6e-06 Score=89.58 Aligned_cols=104 Identities=19% Similarity=0.163 Sum_probs=70.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHc-------C-------------Ccc-cCHHHHhccCCEE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAV-------G-------------VEL-VSFDQALATADFI 287 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~-------g-------------~~~-~sl~ell~~aDvV 287 (628)
++|+|||+|.||..+|..|...|++|++||+.... +...+. | +.. .++++.+++||+|
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDvv 88 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQ 88 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSEE
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCEE
Confidence 69999999999999999999999999999986421 111111 1 122 2677888999999
Q ss_pred EEcCCCCc---------cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHh
Q 006864 288 SLHMPLNP---------TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALD 334 (628)
Q Consensus 288 ~l~~Plt~---------~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~ 334 (628)
++|+|... ..+..+ +.....+++++++|+.+.-.+=..+.+.+.+.
T Consensus 89 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 89 FIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 99999531 122222 33455699999999998433333344444443
No 129
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.02 E-value=1.2e-05 Score=85.54 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=75.0
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcC--------------Ccc-cCHHHHhccCCEEEEcCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVG--------------VEL-VSFDQALATADFISLHMP 292 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g--------------~~~-~sl~ell~~aDvV~l~~P 292 (628)
-++|+|||.|.+|..+|..|...|.+|.+||+... .+...+.+ +.. .++++.++.||+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 46899999999999999999999999999998642 22222222 112 378899999999999999
Q ss_pred CCccccccccHHHHhcCCCCcEEEEcCCCchhcH----HHHHHHHh
Q 006864 293 LNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDE----EALVRALD 334 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~gailIN~aRg~~vde----~aL~~aL~ 334 (628)
-. ..+.++ ++....+++++++|++..|=..+. +.+.+.+.
T Consensus 109 ~~-~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~ 152 (356)
T 3k96_A 109 SF-AFHEVI-TRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELG 152 (356)
T ss_dssp HH-HHHHHH-HHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHC
T ss_pred HH-HHHHHH-HHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcC
Confidence 33 334333 444556889999999987655442 44555554
No 130
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=98.02 E-value=5.1e-06 Score=81.64 Aligned_cols=68 Identities=10% Similarity=0.196 Sum_probs=57.3
Q ss_pred EEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecC---ccEEEEEEeCCCCCHHHHHHHhcccCcccc
Q 006864 560 LILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRR---NHGIMAIGVDEEPNQDSLKEIGKVHFVARI 627 (628)
Q Consensus 560 ~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~g---g~Al~~i~vD~~~~~~~l~~L~~l~~v~~v 627 (628)
.|.+.+.|+||+++.|+++|+++++||.+|+..+..+| +.|.+.+++++...++++++|+++++|.+|
T Consensus 6 tL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~~Le~LL~kLrkI~gV~~V 76 (223)
T 1y7p_A 6 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKTFDYIIEI 76 (223)
T ss_dssp EEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHHTCTTEEEE
T ss_pred EEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCCCHHHHHHHHhCCCCeeEE
Confidence 57788999999999999999999999999999887643 479999999999666999999999999886
No 131
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.00 E-value=1.2e-05 Score=93.13 Aligned_cols=113 Identities=18% Similarity=0.270 Sum_probs=77.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHH-----------HHcCC-------------cc-cCHHHHhcc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKA-----------RAVGV-------------EL-VSFDQALAT 283 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~g~-------------~~-~sl~ell~~ 283 (628)
++|||||+|.||..+|..+...|++|++||+.... +.. .+.|. .. .++ +.+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 393 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGN 393 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGG
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCC
Confidence 68999999999999999999999999999987421 111 11221 11 245 67899
Q ss_pred CCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC-CeeEEEeeccC
Q 006864 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG-VVAQAALDVFT 347 (628)
Q Consensus 284 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g-~i~ga~lDV~~ 347 (628)
||+|+.++|-..+.+.-+-.+..+.++++++|+..+.+-.+ ..+.+.++.. ++ .+++.|.
T Consensus 394 aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i--~~la~~~~~~~~~--ig~hf~~ 454 (715)
T 1wdk_A 394 VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISI--SLLAKALKRPENF--VGMHFFN 454 (715)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCH--HHHGGGCSCGGGE--EEEECCS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCH--HHHHHHhcCccce--EEEEccC
Confidence 99999999977665544445556678999999855444333 4555655432 34 5566665
No 132
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.00 E-value=1.2e-05 Score=82.79 Aligned_cols=82 Identities=13% Similarity=0.262 Sum_probs=68.9
Q ss_pred ceeeecCCeEEEEecCh-hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccc
Q 006864 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li 301 (628)
.+.++.||++.|||.|. +|+.+|+.|.+.|+.|..++++. .+|.+.+++||+|+.+++. .+++
T Consensus 153 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~lI 216 (288)
T 1b0a_A 153 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------KNLRHHVENADLLIVAVGK----PGFI 216 (288)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------SCHHHHHHHCSEEEECSCC----TTCB
T ss_pred cCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhccCCEEEECCCC----cCcC
Confidence 35789999999999997 59999999999999999998543 3688999999999999982 3367
Q ss_pred cHHHHhcCCCCcEEEEcCCCch
Q 006864 302 NDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aRg~~ 323 (628)
..+. +|+|+++||+|.-.+
T Consensus 217 ~~~~---vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 217 PGDW---IKEGAIVIDVGINRL 235 (288)
T ss_dssp CTTT---SCTTCEEEECCCEEC
T ss_pred CHHH---cCCCcEEEEccCCcc
Confidence 6655 499999999997553
No 133
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=97.99 E-value=1.6e-05 Score=86.59 Aligned_cols=107 Identities=17% Similarity=0.230 Sum_probs=74.1
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCc---ccCHHHH---------------hccCCEEE
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE---LVSFDQA---------------LATADFIS 288 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~---~~sl~el---------------l~~aDvV~ 288 (628)
-+|.++-|||+|.+|..+|..|...|++|++||+....-.....|.. ...++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 46889999999999999999999999999999987532222222211 1134433 35799999
Q ss_pred EcCCCCcccc--------cccc--HHHHhcCCCCcEEEEcCCCchhcHHHHHHHH
Q 006864 289 LHMPLNPTTS--------KIFN--DETFAKMKKGVRIVNVARGGVIDEEALVRAL 333 (628)
Q Consensus 289 l~~Plt~~t~--------~li~--~~~l~~mk~gailIN~aRg~~vde~aL~~aL 333 (628)
+|+|...... .+.. +...+.|++|.++|+.+.-.+-..+.+.+.+
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 9999544221 2222 4556679999999999977776677776654
No 134
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.99 E-value=7.6e-06 Score=86.02 Aligned_cols=92 Identities=21% Similarity=0.208 Sum_probs=67.3
Q ss_pred CeEEEEecChhHHHHHHHHHcCC-------CEEEEECCCCC-----h-hHHHHc--------------CCcc-cCHHHHh
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLG-------MNVIAHDPYAP-----A-DKARAV--------------GVEL-VSFDQAL 281 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G-------~~V~~~d~~~~-----~-~~a~~~--------------g~~~-~sl~ell 281 (628)
++|+|||+|.||..+|..|...| .+|.+||+... . +...+. ++.. .++++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA 88 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHHH
Confidence 58999999999999999998878 89999998754 2 111211 1222 3688889
Q ss_pred ccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006864 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 282 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 323 (628)
++||+|++++|- ..+..++ ++....+++++++|++..|-.
T Consensus 89 ~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 89 EDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp TTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred cCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 999999999994 3334433 334456788999999987654
No 135
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.99 E-value=1.2e-05 Score=83.30 Aligned_cols=81 Identities=26% Similarity=0.310 Sum_probs=67.4
Q ss_pred ceeeecCCeEEEEecCh-hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHH--HHhccCCEEEEcCCCCccccc
Q 006864 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFD--QALATADFISLHMPLNPTTSK 299 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~--ell~~aDvV~l~~Plt~~t~~ 299 (628)
.+.++.||++.|||.|. +|+.+|..|.+.|+.|..++++.. +++ +.+++||+|+.++|. .+
T Consensus 159 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------~l~l~~~~~~ADIVI~Avg~----p~ 222 (300)
T 4a26_A 159 CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------TEDMIDYLRTADIVIAAMGQ----PG 222 (300)
T ss_dssp HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------HHHHHHHHHTCSEEEECSCC----TT
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------CchhhhhhccCCEEEECCCC----CC
Confidence 35789999999999998 699999999999999999987532 344 889999999999994 34
Q ss_pred cccHHHHhcCCCCcEEEEcCCCc
Q 006864 300 IFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~aRg~ 322 (628)
++..+. +|+|+++||++.-.
T Consensus 223 ~I~~~~---vk~GavVIDvgi~~ 242 (300)
T 4a26_A 223 YVKGEW---IKEGAAVVDVGTTP 242 (300)
T ss_dssp CBCGGG---SCTTCEEEECCCEE
T ss_pred CCcHHh---cCCCcEEEEEeccC
Confidence 566644 59999999998544
No 136
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.98 E-value=1.4e-05 Score=82.04 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=68.3
Q ss_pred ceeeecCCeEEEEecCh-hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccc
Q 006864 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li 301 (628)
.+.++.||++.|||.|. +|+.+|..|.+.|+.|...+++. .+|++.+++||+|+.++|. .+++
T Consensus 155 ~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------~~L~~~~~~ADIVI~Avg~----p~~I 218 (286)
T 4a5o_A 155 TGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------RDLADHVSRADLVVVAAGK----PGLV 218 (286)
T ss_dssp TTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHTCSEEEECCCC----TTCB
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------cCHHHHhccCCEEEECCCC----CCCC
Confidence 46789999999999987 79999999999999999987642 2688999999999999983 3467
Q ss_pred cHHHHhcCCCCcEEEEcCCCc
Q 006864 302 NDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aRg~ 322 (628)
..+. +|+|+++||++.-.
T Consensus 219 ~~~~---vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 219 KGEW---IKEGAIVIDVGINR 236 (286)
T ss_dssp CGGG---SCTTCEEEECCSCS
T ss_pred CHHH---cCCCeEEEEecccc
Confidence 6654 59999999998654
No 137
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.98 E-value=1.1e-05 Score=87.00 Aligned_cols=94 Identities=20% Similarity=0.286 Sum_probs=76.2
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECC-------CCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCcccc
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDP-------YAPADKARAVGVELVSFDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~-------~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~ 298 (628)
-|+||||+|||||.-|.+-|..|+.-|.+|++--+ +.+...+.+.|++..+..|+.++||+|.+.+|-..+ .
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q-~ 112 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQH-S 112 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGGH-H
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhhH-H
Confidence 48999999999999999999999999999887532 123456788899989999999999999999994432 3
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCc
Q 006864 299 KIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg~ 322 (628)
.++ +.....||+|+.|. .+.|=
T Consensus 113 ~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 113 DVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp HHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred HHH-HHHHhhCCCCCEEE-ecCcc
Confidence 344 46888999999887 45553
No 138
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.98 E-value=1.3e-05 Score=88.59 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=73.2
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CC-EEEEECCCCC----hhHHHH----------------------cC-CcccCHHHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GM-NVIAHDPYAP----ADKARA----------------------VG-VELVSFDQA 280 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~-~V~~~d~~~~----~~~a~~----------------------~g-~~~~sl~el 280 (628)
++|+|||+|.+|..+|..|... |+ +|++||+... .-.... .+ +...+-.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea 98 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSR 98 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHH
Confidence 6899999999999999999999 99 9999998765 221111 11 122222678
Q ss_pred hccCCEEEEcCCCCc--------ccccccc--HHHHhcCCCCcEEEEcCCCchhcHHHHHH
Q 006864 281 LATADFISLHMPLNP--------TTSKIFN--DETFAKMKKGVRIVNVARGGVIDEEALVR 331 (628)
Q Consensus 281 l~~aDvV~l~~Plt~--------~t~~li~--~~~l~~mk~gailIN~aRg~~vde~aL~~ 331 (628)
+++||+|++++|... +...+.. +.....|++|.++|+++.-.+-..+.+.+
T Consensus 99 ~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 99 ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 899999999999653 2222322 45667799999999998766655555554
No 139
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.97 E-value=1.8e-05 Score=81.43 Aligned_cols=81 Identities=16% Similarity=0.287 Sum_probs=67.9
Q ss_pred ceeeecCCeEEEEecCh-hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccc
Q 006864 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li 301 (628)
.+.++.||++.|||.|. +|+.+|..|.+.|+.|...+++. .+|++.+++||+|+.+++. .+++
T Consensus 155 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I 218 (285)
T 3l07_A 155 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------TDLKSHTTKADILIVAVGK----PNFI 218 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCB
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------hhHHHhcccCCEEEECCCC----CCCC
Confidence 45689999999999998 69999999999999999987642 2688999999999999983 3456
Q ss_pred cHHHHhcCCCCcEEEEcCCCc
Q 006864 302 NDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aRg~ 322 (628)
..+. +|+|+++||++.-.
T Consensus 219 ~~~~---vk~GavVIDvgi~~ 236 (285)
T 3l07_A 219 TADM---VKEGAVVIDVGINH 236 (285)
T ss_dssp CGGG---SCTTCEEEECCCEE
T ss_pred CHHH---cCCCcEEEEecccC
Confidence 6644 59999999998544
No 140
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.96 E-value=2.3e-06 Score=90.67 Aligned_cols=92 Identities=16% Similarity=0.188 Sum_probs=67.1
Q ss_pred eEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcC--------------Ccc-cCHHHHhccCCEEEEcCCCC
Q 006864 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVG--------------VEL-VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g--------------~~~-~sl~ell~~aDvV~l~~Plt 294 (628)
+|+|||+|.||..+|..|...|++|.+||+... .+...+.+ +.. .+++++++.||+|++++|-
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999998742 22222222 222 3688889999999999993
Q ss_pred ccccccccHH---HHhcCCC-CcEEEEcCCCch
Q 006864 295 PTTSKIFNDE---TFAKMKK-GVRIVNVARGGV 323 (628)
Q Consensus 295 ~~t~~li~~~---~l~~mk~-gailIN~aRg~~ 323 (628)
..+..++... ....+++ ++++|++..|-.
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~ 128 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIE 128 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCC
Confidence 4444444320 3445678 899999987643
No 141
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.96 E-value=1.4e-05 Score=79.55 Aligned_cols=95 Identities=15% Similarity=0.249 Sum_probs=70.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEE-EEECCCCChhHHHHcCCcccCHHHHh-ccCCEEEEcCCCCccccccccHHHHh
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNV-IAHDPYAPADKARAVGVELVSFDQAL-ATADFISLHMPLNPTTSKIFNDETFA 307 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~~~~a~~~g~~~~sl~ell-~~aDvV~l~~Plt~~t~~li~~~~l~ 307 (628)
.+|||||+|.||+.+++.+...|+++ .+||+....+ . ...++++++ .++|+|++++|-.. .-+....
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~~---~---~~~~~~~l~~~~~DvVv~~~~~~~-----~~~~~~~ 69 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEHE---K---MVRGIDEFLQREMDVAVEAASQQA-----VKDYAEK 69 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCCT---T---EESSHHHHTTSCCSEEEECSCHHH-----HHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcchh---h---hcCCHHHHhcCCCCEEEECCCHHH-----HHHHHHH
Confidence 37999999999999999998889997 6889864211 1 344799999 69999999998321 1122345
Q ss_pred cCCCCcEEEEcCCCchhcH---HHHHHHHhC
Q 006864 308 KMKKGVRIVNVARGGVIDE---EALVRALDS 335 (628)
Q Consensus 308 ~mk~gailIN~aRg~~vde---~aL~~aL~~ 335 (628)
.++.|..+|+..-+..-+. +.|.++.++
T Consensus 70 ~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~ 100 (236)
T 2dc1_A 70 ILKAGIDLIVLSTGAFADRDFLSRVREVCRK 100 (236)
T ss_dssp HHHTTCEEEESCGGGGGSHHHHHHHHHHHHH
T ss_pred HHHCCCcEEEECcccCChHHHHHHHHHHHHh
Confidence 5788999999987776555 566666654
No 142
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.95 E-value=1.9e-05 Score=80.88 Aligned_cols=81 Identities=14% Similarity=0.258 Sum_probs=68.2
Q ss_pred eeeecCCeEEEEecChh-HHHHHHHHHcC--CCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCcccccc
Q 006864 224 GVSLVGKTLAVMGFGKV-GSEVARRAKGL--GMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKI 300 (628)
Q Consensus 224 g~~l~GktiGIIGlG~I-G~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~l 300 (628)
+.++.||++.|||.|.| |+.+|+.|.+. |+.|...++.. .+|.+.+++||+|+.+++. .++
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~ 216 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT------------RDLPALTRQADIVVAAVGV----AHL 216 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC------------SCHHHHHTTCSEEEECSCC----TTC
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch------------hHHHHHHhhCCEEEECCCC----Ccc
Confidence 67899999999999985 99999999999 89999987653 3688999999999999982 335
Q ss_pred ccHHHHhcCCCCcEEEEcCCCch
Q 006864 301 FNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 301 i~~~~l~~mk~gailIN~aRg~~ 323 (628)
+..+. +|+|+++||++.-.+
T Consensus 217 I~~~~---vk~GavVIDVgi~r~ 236 (281)
T 2c2x_A 217 LTADM---VRPGAAVIDVGVSRT 236 (281)
T ss_dssp BCGGG---SCTTCEEEECCEEEE
T ss_pred cCHHH---cCCCcEEEEccCCCC
Confidence 77665 489999999996553
No 143
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.95 E-value=2e-05 Score=80.58 Aligned_cols=77 Identities=10% Similarity=0.136 Sum_probs=65.5
Q ss_pred ecCCeEEEEecCh-hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHH
Q 006864 227 LVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDET 305 (628)
Q Consensus 227 l~GktiGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~ 305 (628)
+.||++.|||.|. +|+.+|+.|.+.|++|..++++. .++++.+++||+|+.++|. .+++..+.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT------------KDIGSMTRSSKIVVVAVGR----PGFLNREM 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHHSSEEEECSSC----TTCBCGGG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc------------ccHHHhhccCCEEEECCCC----CccccHhh
Confidence 8999999999986 79999999999999999998642 3688999999999999984 34666654
Q ss_pred HhcCCCCcEEEEcCCCc
Q 006864 306 FAKMKKGVRIVNVARGG 322 (628)
Q Consensus 306 l~~mk~gailIN~aRg~ 322 (628)
+|+|+++||++.-.
T Consensus 212 ---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 ---VTPGSVVIDVGINY 225 (276)
T ss_dssp ---CCTTCEEEECCCEE
T ss_pred ---ccCCcEEEEeccCc
Confidence 59999999998644
No 144
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=97.93 E-value=2.7e-05 Score=90.19 Aligned_cols=113 Identities=12% Similarity=0.110 Sum_probs=76.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH-----------cCC-------------cc-cCHHHHhcc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-----------VGV-------------EL-VSFDQALAT 283 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~g~-------------~~-~sl~ell~~ 283 (628)
++|||||+|.||..+|..+...|++|++||+.... +.... .|. .. .++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 68999999999999999999999999999987421 11110 121 11 245 57899
Q ss_pred CCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC-CCeeEEEeeccC
Q 006864 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVFT 347 (628)
Q Consensus 284 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~-g~i~ga~lDV~~ 347 (628)
||+|+.++|-..+.+.-+-.+..+.++++++|+....+-.+ ..+.+.++. .++ .+.+.|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i--~~la~~~~~p~~~--iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDL--NKIGERTKSQDRI--VGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH--HHHTTTCSCTTTE--EEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCH--HHHHHHhcCCCCE--EEecCCC
Confidence 99999999977655544445566679999999655444333 345555533 244 5556665
No 145
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.93 E-value=2.1e-05 Score=81.34 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=68.9
Q ss_pred ceeeecCCeEEEEecCh-hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccc
Q 006864 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li 301 (628)
.+.++.||++.|||.|. +|+.+|+.|.+.|++|..+++.. .+|.+.+++||+|+.+++. .+++
T Consensus 159 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I 222 (301)
T 1a4i_A 159 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT------------AHLDEEVNKGDILVVATGQ----PEMV 222 (301)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCB
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc------------ccHHHHhccCCEEEECCCC----cccC
Confidence 46789999999999997 69999999999999999997542 3688999999999999984 3457
Q ss_pred cHHHHhcCCCCcEEEEcCCCchh
Q 006864 302 NDETFAKMKKGVRIVNVARGGVI 324 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aRg~~v 324 (628)
..+. +|+|+++||++.-.+-
T Consensus 223 ~~~~---vk~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 223 KGEW---IKPGAIVIDCGINYVP 242 (301)
T ss_dssp CGGG---SCTTCEEEECCCBC--
T ss_pred CHHH---cCCCcEEEEccCCCcc
Confidence 6655 5899999999976543
No 146
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.93 E-value=2e-05 Score=80.75 Aligned_cols=105 Identities=16% Similarity=0.088 Sum_probs=75.2
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChh-HHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHh
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPAD-KARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~ 307 (628)
||++.|||.|.+|++++..|...|.+|.+++|..... ...+.++...+++++- ++|+|+.++|..-.....+..+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l~-~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKS-AFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCSS-CCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHhc-cCCEEEEcccCCCCCCCCCChHHHH
Confidence 8999999999999999999999999999999986432 2225566555665543 8999999999764322345555333
Q ss_pred -cCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 308 -KMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 308 -~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
.++++.+++|+.... ...-+.+|-+.|
T Consensus 197 ~~l~~~~~v~D~vY~P--~T~ll~~A~~~G 224 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF--LTPFLSLAKELK 224 (269)
T ss_dssp HHHHHCSEEEESCCSS--CCHHHHHHHHTT
T ss_pred hhCCCCCEEEEeCCCC--chHHHHHHHHCc
Confidence 567888888888765 444444444444
No 147
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.92 E-value=7e-06 Score=85.92 Aligned_cols=93 Identities=19% Similarity=0.247 Sum_probs=69.7
Q ss_pred ceeeecCCeEEEEecChh-HHHHHHHHHcCCCEEEEECCCCCh--hHHHHcCC---cc--------cCHHHHhccCCEEE
Q 006864 223 VGVSLVGKTLAVMGFGKV-GSEVARRAKGLGMNVIAHDPYAPA--DKARAVGV---EL--------VSFDQALATADFIS 288 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~---~~--------~sl~ell~~aDvV~ 288 (628)
.|.++.|+++.|||.|.| |+.+|+.|.+.|++|..+|+.... .++..++. .. .++.+.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 577899999999999976 999999999999999999875211 11111111 11 35889999999999
Q ss_pred EcCCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006864 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 289 l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 321 (628)
.+++.. ..+|..+. +|+|+++||+|..
T Consensus 251 sAtg~p---~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPSE---NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp ECCCCT---TCCBCTTT---SCTTEEEEECSSS
T ss_pred ECCCCC---cceeCHHH---cCCCeEEEEcCCC
Confidence 999842 22366655 4899999999854
No 148
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.91 E-value=9.1e-06 Score=82.40 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=68.8
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHc---CC----c-ccCHHHHhccCCEEEEcCCCCcccccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAV---GV----E-LVSFDQALATADFISLHMPLNPTTSKI 300 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~---g~----~-~~sl~ell~~aDvV~l~~Plt~~t~~l 300 (628)
++|+|||+|.||..+|..|...|++|.+||+.... +..... +. . ..+..+.++.+|+|++++|-. .+...
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 47999999999999999999999999999987532 111111 11 0 123346778999999999954 34444
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHh
Q 006864 301 FNDETFAKMKKGVRIVNVARGGVIDEEALVRALD 334 (628)
Q Consensus 301 i~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~ 334 (628)
+ ++....+++++++|++..| +-..+.+.+.+.
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g-~~~~~~l~~~~~ 111 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNG-MGTIEELQNIQQ 111 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSS-SCTTGGGTTCCS
T ss_pred H-HHHHhhCCCCCEEEEecCC-CCcHHHHHHhcC
Confidence 3 3445568889999998654 322234444443
No 149
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.90 E-value=4.2e-06 Score=86.22 Aligned_cols=106 Identities=22% Similarity=0.203 Sum_probs=72.6
Q ss_pred CeEEEEecChhHHHHHHHHHcC-----C-CEEEEECCCCChhHHHH-cCCccc--------------CHHHHhccCCEEE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-----G-MNVIAHDPYAPADKARA-VGVELV--------------SFDQALATADFIS 288 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-----G-~~V~~~d~~~~~~~a~~-~g~~~~--------------sl~ell~~aDvV~ 288 (628)
++|+|||+|.||..+|..|... | .+|.+||+....+...+ .|+... +..+.+..+|+|+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 88 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYIL 88 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEEE
Confidence 4799999999999999999887 8 99999998212233334 454322 2335678999999
Q ss_pred EcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 289 l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
+++|-.. +...+ +.....++++.+||++.-| +-.++.+.+.+...++
T Consensus 89 l~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~v 135 (317)
T 2qyt_A 89 FCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDTVV 135 (317)
T ss_dssp ECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTTB
T ss_pred EecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCcE
Confidence 9999543 33333 2333456788999998765 3334666666655443
No 150
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.89 E-value=1e-05 Score=74.50 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=74.5
Q ss_pred ecCCeEEEEec----ChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccc
Q 006864 227 LVGKTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 227 l~GktiGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li 301 (628)
++-++|+|||. |++|..+++.|+..|++|+.+||.... -.|+... +++|+.+..|++++++| .+....++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~ 86 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA 86 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH
Confidence 35579999999 999999999999999999999987421 1466554 79999999999999999 45555555
Q ss_pred cHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 302 NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
. +..+ +..++++++++. . .+.+.++.++..+
T Consensus 87 ~-~~~~-~g~~~i~~~~~~---~-~~~l~~~a~~~Gi 117 (138)
T 1y81_A 87 K-EAVE-AGFKKLWFQPGA---E-SEEIRRFLEKAGV 117 (138)
T ss_dssp H-HHHH-TTCCEEEECTTS---C-CHHHHHHHHHHTC
T ss_pred H-HHHH-cCCCEEEEcCcc---H-HHHHHHHHHHCCC
Confidence 3 3444 666777777743 2 4666676666544
No 151
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.89 E-value=1e-05 Score=84.72 Aligned_cols=86 Identities=17% Similarity=0.280 Sum_probs=64.1
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcC-----------Ccc-cCHHHHhccCCEEEEcCCCCc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVG-----------VEL-VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g-----------~~~-~sl~ell~~aDvV~l~~Plt~ 295 (628)
-.+|+|||+|.||..+|.+|...|.+|.+||+... .+...+.| +.. .++++ ++.+|+|++++| ..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-VQ 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-GG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-HH
Confidence 36899999999999999999999999999998742 22223333 232 26778 899999999999 34
Q ss_pred cccccccHHHHhcCC-CCcEEEEcCCC
Q 006864 296 TTSKIFNDETFAKMK-KGVRIVNVARG 321 (628)
Q Consensus 296 ~t~~li~~~~l~~mk-~gailIN~aRg 321 (628)
.++..+ ..++ ++.++|++..|
T Consensus 92 ~~~~v~-----~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 92 YIREHL-----LRLPVKPSMVLNLSKG 113 (335)
T ss_dssp GHHHHH-----TTCSSCCSEEEECCCC
T ss_pred HHHHHH-----HHhCcCCCEEEEEeCC
Confidence 444333 3344 78999999876
No 152
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.88 E-value=1.8e-05 Score=81.36 Aligned_cols=108 Identities=10% Similarity=0.172 Sum_probs=71.8
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHHHHcCCccc---CHHHHhccCCEEEEcCCCC--cccc
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKARAVGVELV---SFDQALATADFISLHMPLN--PTTS 298 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~g~~~~---sl~ell~~aDvV~l~~Plt--~~t~ 298 (628)
.++.||++.|+|.|.+|+.++..|...|+ +|.+++|...........+... ++.++++++|+|+.++|.. ++..
T Consensus 113 ~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~ 192 (277)
T 3don_A 113 EGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTD 192 (277)
T ss_dssp TTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------C
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCc
Confidence 35789999999999999999999999998 8999998753221111122222 4566788999999999964 3222
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
..+. .+.++++.+++|+..... ...-+.+|-+.|
T Consensus 193 ~~l~---~~~l~~~~~V~D~vY~P~-~T~ll~~A~~~G 226 (277)
T 3don_A 193 SVIS---LNRLASHTLVSDIVYNPY-KTPILIEAEQRG 226 (277)
T ss_dssp CSSC---CTTCCSSCEEEESCCSSS-SCHHHHHHHHTT
T ss_pred CCCC---HHHcCCCCEEEEecCCCC-CCHHHHHHHHCc
Confidence 2232 455789999999986643 233333444444
No 153
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.87 E-value=1.1e-05 Score=85.88 Aligned_cols=90 Identities=10% Similarity=0.149 Sum_probs=65.5
Q ss_pred CeEEEEecChhHHHHHHHHHcCC-------CEEEEECCCCC-----hh-HHHHc--------------CCcc-cCHHHHh
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLG-------MNVIAHDPYAP-----AD-KARAV--------------GVEL-VSFDQAL 281 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G-------~~V~~~d~~~~-----~~-~a~~~--------------g~~~-~sl~ell 281 (628)
++|+|||.|.||..+|..|...| .+|.+||+... .. ...+. ++.. .++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998777 89999998754 22 12221 1222 2678889
Q ss_pred ccCCEEEEcCCCCccccccccHHHHh----cCCCCcEEEEcCCC
Q 006864 282 ATADFISLHMPLNPTTSKIFNDETFA----KMKKGVRIVNVARG 321 (628)
Q Consensus 282 ~~aDvV~l~~Plt~~t~~li~~~~l~----~mk~gailIN~aRg 321 (628)
++||+|++++|- ...+.++ .+... .+++++++|++..|
T Consensus 102 ~~aDvVilav~~-~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVL-ASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHH-HHHTC---CCCCTTCEEEECCCS
T ss_pred cCCCEEEEcCCH-HHHHHHH-HHHhhhhhccCCCCCEEEEeCCc
Confidence 999999999993 4444443 22333 57889999999876
No 154
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.87 E-value=3.8e-05 Score=79.55 Aligned_cols=106 Identities=12% Similarity=0.172 Sum_probs=73.7
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCCh--hHHHHcCC---ccc---CHHHHhccCCEEEEcCCCCc
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVGV---ELV---SFDQALATADFISLHMPLNP 295 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g~---~~~---sl~ell~~aDvV~l~~Plt~ 295 (628)
.++.|++++|+|.|.+|+.++..|...|+ +|.++|+.... ..+...+. ... ++.+.+.++|+|+.++|...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 35789999999999999999999999998 99999987422 22333333 233 45667889999999999764
Q ss_pred ccc--c-cccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 296 TTS--K-IFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 296 ~t~--~-li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
... . .+. .+.++++.+++|+.-.. .... |.+..++
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~P-~~T~-ll~~A~~ 254 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYNP-LETK-WLKEAKA 254 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCSS-SSCH-HHHHHHH
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCCC-CCCH-HHHHHHH
Confidence 211 1 233 24578899999998743 2333 4444444
No 155
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.86 E-value=8.5e-06 Score=77.54 Aligned_cols=95 Identities=14% Similarity=0.261 Sum_probs=65.7
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcC-CCEEEEECCCCC-hhHHHHcCCccc-----C---HHHH--hccCCEEEEcC
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGL-GMNVIAHDPYAP-ADKARAVGVELV-----S---FDQA--LATADFISLHM 291 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~~-~~~a~~~g~~~~-----s---l~el--l~~aDvV~l~~ 291 (628)
+.++.+++++|+|+|.+|+.+|+.|+.. |++|+++|+... .+...+.|+..+ + +.++ +.++|+|++++
T Consensus 34 ~~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 34 LINPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp CBCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CcCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 3467789999999999999999999998 999999998752 233445565432 2 3444 67899999999
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCC
Q 006864 292 PLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 292 Plt~~t~~li~~~~l~~mk~gailIN~aR 320 (628)
|-.+.+... ...+..+.+...++..+.
T Consensus 114 ~~~~~~~~~--~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 114 PHHQGNQTA--LEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp SSHHHHHHH--HHHHHHTTCCSEEEEEES
T ss_pred CChHHHHHH--HHHHHHHCCCCEEEEEEC
Confidence 854333222 234555666666665443
No 156
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.83 E-value=1.4e-05 Score=83.87 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=76.6
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcc--------------cCHHHHhccCCEEEEcCCCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL--------------VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~--------------~sl~ell~~aDvV~l~~Plt 294 (628)
.++|+|||.|.||..+|.+|...|.+|.+||+....+...+.|... .++++ +..+|+|++++|-
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 4689999999999999999999999999999852223334445421 25666 5899999999994
Q ss_pred ccccccccHHHHhcCCCCcEEEEcCCCc------------------hhcHHHHHHHHhCCCeeE
Q 006864 295 PTTSKIFNDETFAKMKKGVRIVNVARGG------------------VIDEEALVRALDSGVVAQ 340 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~gailIN~aRg~------------------~vde~aL~~aL~~g~i~g 340 (628)
..++..+ +..-..++++++||.+.-|= +-.++.+.+.+...++.+
T Consensus 81 ~~~~~~~-~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~ 143 (335)
T 3ghy_A 81 PALESVA-AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLG 143 (335)
T ss_dssp HHHHHHH-GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEE
T ss_pred hhHHHHH-HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEE
Confidence 3444333 22333467899999998882 234556777776666543
No 157
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.81 E-value=7.5e-05 Score=78.03 Aligned_cols=88 Identities=20% Similarity=0.371 Sum_probs=67.3
Q ss_pred CCeEEEEecChhHHHHHHHHHc-CC-CEEEEECCCCChhHHHH----cCCc--ccCHHHHhccCCEEEEcCCCCcccccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKG-LG-MNVIAHDPYAPADKARA----VGVE--LVSFDQALATADFISLHMPLNPTTSKI 300 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~-~G-~~V~~~d~~~~~~~a~~----~g~~--~~sl~ell~~aDvV~l~~Plt~~t~~l 300 (628)
.++++|||.|.+|+.+++.+.. ++ -+|.+||+......+.+ .|+. .+++++++++||+|++|+|.. ..+
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~---~pv 197 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRST---TPL 197 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCS---SCS
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCC---Ccc
Confidence 5899999999999999999875 44 58999999832222222 3553 349999999999999999864 355
Q ss_pred ccHHHHhcCCCCcEEEEcCCCc
Q 006864 301 FNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 301 i~~~~l~~mk~gailIN~aRg~ 322 (628)
+.. +.+|+|+.+++++...
T Consensus 198 l~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 198 FAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp SCG---GGCCTTCEEEECCCSS
T ss_pred cCH---HHcCCCcEEEECCCCC
Confidence 553 3589999999998643
No 158
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.76 E-value=3.8e-05 Score=77.88 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=74.1
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHHHHcCC-----cccCHHHHhccCCEEEEcCCCC--cccc
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKARAVGV-----ELVSFDQALATADFISLHMPLN--PTTS 298 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~g~-----~~~sl~ell~~aDvV~l~~Plt--~~t~ 298 (628)
+.| +++|||.|.+|++++..|...|. +|.++||.. ++++++-- ...++.+.++++|+|+.++|.. ++ .
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~--~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~ 182 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI--ERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-E 182 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH--HHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-C
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH--HHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-C
Confidence 578 99999999999999999999998 899999864 33333211 2336778899999999999964 32 2
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
..+..+. ++++.+++|+.-+ ...-|.++.+.|
T Consensus 183 ~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 183 LPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 2344333 5789999999988 555555666555
No 159
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.75 E-value=7.5e-05 Score=77.74 Aligned_cols=107 Identities=17% Similarity=0.145 Sum_probs=76.5
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCc---------------c-cCHHHHhccCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE---------------L-VSFDQALATADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~---------------~-~sl~ell~~aDvV~l~~Pl 293 (628)
++|+|||.|.||..+|..|...|.+|.+|++.. .+..++.|+. . .+++++.+.+|+|++++|-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 589999999999999999999999999999875 3333333321 1 2466666689999999995
Q ss_pred CccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeE
Q 006864 294 NPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQ 340 (628)
Q Consensus 294 t~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~g 340 (628)
.. +...+ +..-..++++..||.+.-| +-.++.+.+.+...++.+
T Consensus 82 ~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl~ 125 (320)
T 3i83_A 82 VE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVIS 125 (320)
T ss_dssp CT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEEE
T ss_pred CC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEEE
Confidence 54 44433 3334457888999988755 334577777776655543
No 160
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.75 E-value=4e-05 Score=71.04 Aligned_cols=99 Identities=17% Similarity=0.186 Sum_probs=61.9
Q ss_pred cceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHH-HcCCccc-----C---HHHH-hccCCEEEEc
Q 006864 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKAR-AVGVELV-----S---FDQA-LATADFISLH 290 (628)
Q Consensus 222 ~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~g~~~~-----s---l~el-l~~aDvV~l~ 290 (628)
.+.....++++.|+|+|.+|+.+|+.|+..|.+|+++|+.... +... ..|+..+ + +.+. +..+|+|+++
T Consensus 12 ~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred hhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 3556778899999999999999999999999999999986422 2222 3444322 2 3333 6789999999
Q ss_pred CCCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006864 291 MPLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 291 ~Plt~~t~~li~~~~l~~mk~gailIN~aRg~ 322 (628)
+|.... . ..-......+.+...++-..++.
T Consensus 92 ~~~~~~-~-~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 92 TNDDST-N-FFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp SSCHHH-H-HHHHHHHHHTSCCSEEEEECSSG
T ss_pred eCCcHH-H-HHHHHHHHHHCCCCeEEEEECCH
Confidence 984322 1 11122334445555666555544
No 161
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.73 E-value=1.6e-05 Score=73.75 Aligned_cols=102 Identities=13% Similarity=0.181 Sum_probs=74.8
Q ss_pred CCeEEEEec----ChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccH
Q 006864 229 GKTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 229 GktiGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
-++|+|||+ |++|..+++.|+..|++|+.+||....+ .-.|+... +++++....|++++++| .+....++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~--~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~- 88 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGK--TLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ- 88 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTS--EETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH-
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccc--ccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH-
Confidence 478999999 8999999999999999999999875101 11466554 78898889999999999 455555553
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCee
Q 006864 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 339 (628)
+..+ ...+.++++.+ .. ++.+.+++++..+.
T Consensus 89 ~~~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi~ 119 (145)
T 2duw_A 89 EAIA-IGAKTLWLQLG--VI--NEQAAVLAREAGLS 119 (145)
T ss_dssp HHHH-HTCCEEECCTT--CC--CHHHHHHHHTTTCE
T ss_pred HHHH-cCCCEEEEcCC--hH--HHHHHHHHHHcCCE
Confidence 3333 56677777753 22 66777777776553
No 162
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.64 E-value=5e-05 Score=69.33 Aligned_cols=89 Identities=20% Similarity=0.347 Sum_probs=61.5
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-----C---HHHH-hccCCEEEEcCCCCccccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-----S---FDQA-LATADFISLHMPLNPTTSK 299 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-----s---l~el-l~~aDvV~l~~Plt~~t~~ 299 (628)
+++.|+|+|++|+.+|+.|+..|++|+++|+... .+...+.|+..+ + |+++ +.++|+|++++|-..++..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~ 87 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGE 87 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHH
Confidence 5799999999999999999999999999998752 233445566432 2 2222 5689999999995544332
Q ss_pred cccHHHHhcCCCCcEEEEcCC
Q 006864 300 IFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~aR 320 (628)
+ ...+..+.++..+|--++
T Consensus 88 ~--~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 88 I--VASARAKNPDIEIIARAH 106 (140)
T ss_dssp H--HHHHHHHCSSSEEEEEES
T ss_pred H--HHHHHHHCCCCeEEEEEC
Confidence 2 234455666666665443
No 163
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.64 E-value=7.8e-06 Score=83.42 Aligned_cols=85 Identities=8% Similarity=0.040 Sum_probs=55.1
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEE-EEECCCCCh-hHH-HHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNV-IAHDPYAPA-DKA-RAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~~-~~a-~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l 306 (628)
++|||||+|+||+.+|+.|... ++| .+||+.... +.. ...+....++++++++||+|++++|-.. . .+.+
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~-----~~v~ 75 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-I-----KTVA 75 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-H-----HHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-H-----HHHH
Confidence 4799999999999999999877 888 489987422 222 2345522367788899999999999542 2 3334
Q ss_pred hcC-CCCcEEEEcCCC
Q 006864 307 AKM-KKGVRIVNVARG 321 (628)
Q Consensus 307 ~~m-k~gailIN~aRg 321 (628)
..+ +++.+|||++-+
T Consensus 76 ~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 76 NHLNLGDAVLVHCSGF 91 (276)
T ss_dssp TTTCCSSCCEEECCSS
T ss_pred HHhccCCCEEEECCCC
Confidence 444 688999999844
No 164
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.63 E-value=0.00016 Score=74.87 Aligned_cols=107 Identities=15% Similarity=0.186 Sum_probs=75.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCc--------------c-cCHHHHhccCCEEEEcCCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE--------------L-VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~--------------~-~sl~ell~~aDvV~l~~Plt 294 (628)
++|+|||.|.||..+|..|...|.+|.+|++.. .+...+.|+. . .+.++ +..+|+|++++|-.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCC
Confidence 589999999999999999999999999999875 3444444431 1 14444 68999999999944
Q ss_pred ccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEE
Q 006864 295 PTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQA 341 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga 341 (628)
. ++..+ +..-..++++++||.+.-| +-.++.+.+.+...++.++
T Consensus 81 ~-~~~~l-~~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 81 A-NSRYE-ELIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp G-GGGHH-HHHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEEE
T ss_pred C-cHHHH-HHHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEEE
Confidence 3 34333 3333457889999998765 3346677777766665543
No 165
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.61 E-value=6.8e-05 Score=62.49 Aligned_cols=65 Identities=12% Similarity=0.121 Sum_probs=50.7
Q ss_pred EEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCC---CCHHHHHHHhcccCcccc
Q 006864 561 ILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE---PNQDSLKEIGKVHFVARI 627 (628)
Q Consensus 561 Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~---~~~~~l~~L~~l~~v~~v 627 (628)
|-+...|+||+++.|+++|+++|+||.++...+.. + .+.+.+.++-. .-++++++|+++++|.++
T Consensus 8 l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~-~-~~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v 75 (88)
T 2ko1_A 8 IRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKD-G-IFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTV 75 (88)
T ss_dssp EEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECS-S-EEEEEEEEEESSHHHHHHHHHHHTTCTTEEEE
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcC-C-EEEEEEEEEECCHHHHHHHHHHHhcCCCceEE
Confidence 44567899999999999999999999999997643 2 66666554422 234789999999998765
No 166
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.61 E-value=0.00013 Score=65.14 Aligned_cols=88 Identities=16% Similarity=0.239 Sum_probs=57.3
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHH-HcCCccc-----CHHH---H-hccCCEEEEcCCCCccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKAR-AVGVELV-----SFDQ---A-LATADFISLHMPLNPTT 297 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~g~~~~-----sl~e---l-l~~aDvV~l~~Plt~~t 297 (628)
+++++|+|+|.+|+.+|+.|...|.+|.++|+.... +... ..++... +.+. . +.++|+|++++|....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~- 82 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV- 82 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH-
Confidence 578999999999999999999999999999986422 2222 2354321 2222 2 6789999999984322
Q ss_pred cccccHHHHhcCCCCcEEEEc
Q 006864 298 SKIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 298 ~~li~~~~l~~mk~gailIN~ 318 (628)
+..-......++++.+++-+
T Consensus 83 -~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 83 -NLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp -HHHHHHHHHHTTCCCEEEEC
T ss_pred -HHHHHHHHHHcCCCEEEEEe
Confidence 12222344456666665544
No 167
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.59 E-value=0.00012 Score=63.48 Aligned_cols=98 Identities=22% Similarity=0.231 Sum_probs=64.1
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCC-CEEEEECCCCCh-hHHHHcCCcc--------cCHHHHhccCCEEEEcCCCCccc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLG-MNVIAHDPYAPA-DKARAVGVEL--------VSFDQALATADFISLHMPLNPTT 297 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~~-~~a~~~g~~~--------~sl~ell~~aDvV~l~~Plt~~t 297 (628)
.+++++|+|.|.||+.+++.|...| .+|+++|+.... +.....++.. .++.++++++|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 3578999999999999999999999 899999986422 2222334322 135677889999999997432 1
Q ss_pred cccccHHHHhcCCCCcEEEEcCCCchhcHHHHHH
Q 006864 298 SKIFNDETFAKMKKGVRIVNVARGGVIDEEALVR 331 (628)
Q Consensus 298 ~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~ 331 (628)
..++ -...+.|...++.+ +.+-..+.+.+
T Consensus 83 ~~~~----~~~~~~g~~~~~~~-~~~~~~~~~~~ 111 (118)
T 3ic5_A 83 PIIA----KAAKAAGAHYFDLT-EDVAATNAVRA 111 (118)
T ss_dssp HHHH----HHHHHTTCEEECCC-SCHHHHHHHHH
T ss_pred HHHH----HHHHHhCCCEEEec-CcHHHHHHHHH
Confidence 1111 11235677777765 33333444433
No 168
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.59 E-value=0.00022 Score=74.67 Aligned_cols=130 Identities=15% Similarity=0.097 Sum_probs=88.9
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHH-----------HHcCC--------------c-ccCHHHHh
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKA-----------RAVGV--------------E-LVSFDQAL 281 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~g~--------------~-~~sl~ell 281 (628)
-++|+|||.|.||+.+|..+...|++|+.||+.... +.+ .+.|. . ..++++.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 468999999999999999999999999999986421 110 11110 1 13688999
Q ss_pred ccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC-CeeEEEeeccCCCCCCCCCccccC
Q 006864 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG-VVAQAALDVFTEEPPAKDSKLVQH 360 (628)
Q Consensus 282 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g-~i~ga~lDV~~~EP~~~~~~L~~~ 360 (628)
+.||+|+=++|-+-+.+.-+-++.=+.++++++|-...++ +.-..|.+.++.. ++ .++..|.+-|. -||.+
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~p~r~--ig~HffNP~~~---m~LVE- 157 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAHVKQC--IVAHPVNPPYY---IPLVE- 157 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTTGGGE--EEEEECSSTTT---CCEEE-
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccCCCcE--EEecCCCCccc---cchHH-
Confidence 9999999999987777766656666668999998766555 3445566666542 55 44555554332 34544
Q ss_pred CcEEEcCC
Q 006864 361 ENVTVTPH 368 (628)
Q Consensus 361 ~nvilTPH 368 (628)
||-+|+
T Consensus 158 --iv~g~~ 163 (319)
T 3ado_A 158 --LVPHPE 163 (319)
T ss_dssp --EEECTT
T ss_pred --hcCCCC
Confidence 555554
No 169
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.55 E-value=0.00018 Score=76.31 Aligned_cols=90 Identities=19% Similarity=0.232 Sum_probs=65.8
Q ss_pred cCCeEEEEecChhHHHHHHHHH-cCC-CEEEEECCCCCh-h-HHHHc----CC--c-ccCHHHHhccCCEEEEcCCCCcc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAK-GLG-MNVIAHDPYAPA-D-KARAV----GV--E-LVSFDQALATADFISLHMPLNPT 296 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~-~~G-~~V~~~d~~~~~-~-~a~~~----g~--~-~~sl~ell~~aDvV~l~~Plt~~ 296 (628)
.++++||||.|.+|+.+++.+. .++ .+|.+||+.... + .+..+ |+ . ..++++++++||+|++|+|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 4579999999999999998875 344 589999987522 2 22222 43 2 2379999999999999999652
Q ss_pred ccccccHHHHhcCCCCcEEEEcCCC
Q 006864 297 TSKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 297 t~~li~~~~l~~mk~gailIN~aRg 321 (628)
...++.. +.+++|..+++++..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 2345543 457999999999864
No 170
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.48 E-value=0.00013 Score=66.12 Aligned_cols=65 Identities=17% Similarity=0.204 Sum_probs=48.0
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-----C---HHHH-hccCCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-----S---FDQA-LATADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-----s---l~el-l~~aDvV~l~~P 292 (628)
.++++.|+|+|.+|+.+|+.|...|++|+++|+... .+...+.++..+ + ++++ +.++|+|++++|
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 357899999999999999999999999999998642 223344455321 2 2222 467999999998
No 171
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.44 E-value=8.8e-05 Score=76.33 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=66.2
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCCh--hHHHHcC----CcccCHHHHhccCCEEEEcCCCCcc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVG----VELVSFDQALATADFISLHMPLNPT 296 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g----~~~~sl~ell~~aDvV~l~~Plt~~ 296 (628)
+.++.||++.|+|.|.+|+.++..|...|+ +|.++++.... ..+...+ +...+++++..++|+|+.++|..-.
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~ 200 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLD 200 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC-
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCC
Confidence 346889999999999999999999999996 99999987422 1222222 3344677776899999999996532
Q ss_pred cc-ccccHHHHhcCCCCcEEEEcCCCc
Q 006864 297 TS-KIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 297 t~-~li~~~~l~~mk~gailIN~aRg~ 322 (628)
.. ..+.. +.++++.+++|+.-..
T Consensus 201 ~~~~~l~~---~~l~~~~~V~DlvY~P 224 (281)
T 3o8q_A 201 GELPAIDP---VIFSSRSVCYDMMYGK 224 (281)
T ss_dssp ---CSCCG---GGEEEEEEEEESCCCS
T ss_pred CCCCCCCH---HHhCcCCEEEEecCCC
Confidence 11 12322 3356677777776543
No 172
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.44 E-value=0.0001 Score=78.63 Aligned_cols=108 Identities=14% Similarity=0.081 Sum_probs=69.0
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCc--------ccCHHHHhccCCEEEEcCCCCc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE--------LVSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~--------~~sl~ell~~aDvV~l~~Plt~ 295 (628)
..+-++++++|||+|.||+.+|+.|... .+|.++|+............. ..+++++++++|+|+.++|...
T Consensus 11 ~~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~ 89 (365)
T 2z2v_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL 89 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHH
T ss_pred cccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhh
Confidence 3466789999999999999999999877 899999987422111111111 1257889999999999998432
Q ss_pred cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 296 TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 296 ~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
. . .-..+.++.|..+++++-- .-+..+|.+..++..+
T Consensus 90 ~-~----~v~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~ 126 (365)
T 2z2v_A 90 G-F----KSIKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQV 126 (365)
T ss_dssp H-H----HHHHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTC
T ss_pred h-H----HHHHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCC
Confidence 1 1 1123446789999998742 2233455555544433
No 173
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.43 E-value=0.00017 Score=75.07 Aligned_cols=107 Identities=21% Similarity=0.249 Sum_probs=71.2
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCc-------------c-cCHHHHhccCCEEEEcC
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVE-------------L-VSFDQALATADFISLHM 291 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~-------------~-~sl~ell~~aDvV~l~~ 291 (628)
...++|+|||.|.||..+|..|...|.+|..| ++. ..+...+.|.. . .++++ +..+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 34579999999999999999999999999999 553 22333333321 1 23444 58999999999
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCee
Q 006864 292 PLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (628)
Q Consensus 292 Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 339 (628)
|-. .++..+ +..-..+++++++|.+.-| +-.++.+.+.+. .++.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nG-i~~~~~l~~~~~-~~vl 138 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNG-VENADTLRSLLE-QEVA 138 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSS-SSHHHHHHHHCC-SEEE
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCC-CCcHHHHHHHcC-CcEE
Confidence 954 444433 3333457889999998765 333456667665 4443
No 174
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.36 E-value=0.0002 Score=72.99 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=51.5
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh--hHHHHcC----CcccCHHHHhc-cCCEEEEcCCCCc
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVG----VELVSFDQALA-TADFISLHMPLNP 295 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----~~~~sl~ell~-~aDvV~l~~Plt~ 295 (628)
..+.||+++|+|.|.+|++++..|...|.+|.++|+.... ..+...+ +...+++++.+ ++|+|+.++|...
T Consensus 115 ~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 115 WLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp CCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 4578999999999999999999999999999999987422 1222221 22234555444 8999999999653
No 175
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.35 E-value=0.00037 Score=70.95 Aligned_cols=95 Identities=13% Similarity=0.118 Sum_probs=64.6
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh--hHHHHcC----CcccCHHHHh-ccCCEEEEcCCCCccc
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVG----VELVSFDQAL-ATADFISLHMPLNPTT 297 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----~~~~sl~ell-~~aDvV~l~~Plt~~t 297 (628)
..+.||++.|+|.|.+|+.+|+.|...|.+|.++|+.... +.+...+ +...+++++. .++|+|+.++|.....
T Consensus 115 ~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~ 194 (271)
T 1nyt_A 115 FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG 194 (271)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCC
Confidence 3578999999999999999999999999999999987422 1222222 1223444444 5899999999965421
Q ss_pred c-ccccHHHHhcCCCCcEEEEcCCCc
Q 006864 298 S-KIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 298 ~-~li~~~~l~~mk~gailIN~aRg~ 322 (628)
. .-+.. ..++++.+++|+.-..
T Consensus 195 ~~~~i~~---~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 195 DIPAIPS---SLIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCCG---GGCCTTCEEEESCCCS
T ss_pred CCCCCCH---HHcCCCCEEEEeccCC
Confidence 0 01222 2256788888877654
No 176
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.35 E-value=0.00015 Score=77.75 Aligned_cols=83 Identities=20% Similarity=0.307 Sum_probs=69.1
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCC---EEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccH
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGM---NVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~---~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
...++.|||. |+.|+.-++.++++|. .|.++|.... ..|-. + +.+.++|+|+.++......-.++.+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~-----~~g~~---~-~~i~~aDivIn~vlig~~aP~Lvt~ 283 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKET-----SRGGP---F-DEIPQADIFINCIYLSKPIAPFTNM 283 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHH-----TTCSC---C-THHHHSSEEEECCCCCSSCCCSCCH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccc-----ccCCc---h-hhHhhCCEEEECcCcCCCCCcccCH
Confidence 3568999999 9999999999999998 8999997531 11322 2 3456999999999997667789999
Q ss_pred HHHhcC-CCCcEEEEcC
Q 006864 304 ETFAKM-KKGVRIVNVA 319 (628)
Q Consensus 304 ~~l~~m-k~gailIN~a 319 (628)
+.++.| |||++|||++
T Consensus 284 e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 284 EKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHHCCTTCCCCEEEETT
T ss_pred HHHhcCcCCCeEEEEEe
Confidence 999999 9999999996
No 177
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.34 E-value=0.00015 Score=65.05 Aligned_cols=94 Identities=14% Similarity=0.238 Sum_probs=58.0
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCcc-----cC---HHHH-hccCCEEEEcCCCCcc
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVEL-----VS---FDQA-LATADFISLHMPLNPT 296 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~-----~s---l~el-l~~aDvV~l~~Plt~~ 296 (628)
+.+++++|+|+|.+|+.+++.|...|++|+++|+.... +.....+... .+ ++++ +.++|+|++++|...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 56789999999999999999999999999999976321 1122223321 12 2233 5789999999885422
Q ss_pred ccccccHHHHhcCCCCcEEEEcCCCc
Q 006864 297 TSKIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 297 t~~li~~~~l~~mk~gailIN~aRg~ 322 (628)
+ ++.-......+.+. .+|-...+.
T Consensus 84 ~-~~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 A-STLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp H-HHHHHHHHHHTTCS-EEEEECCSH
T ss_pred H-HHHHHHHHHHcCCC-eEEEEeCCH
Confidence 1 11222334445565 555544443
No 178
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.34 E-value=0.00032 Score=71.84 Aligned_cols=95 Identities=9% Similarity=0.112 Sum_probs=65.5
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCCh--hHHHHcC---CcccCHHHHh-ccCCEEEEcCCCCcc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVG---VELVSFDQAL-ATADFISLHMPLNPT 296 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g---~~~~sl~ell-~~aDvV~l~~Plt~~ 296 (628)
+.++.||++.|+|.|.+|+.++..|...|. +|.+++|.... +.+...+ +...+++++- .++|+|+.++|..-.
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 456889999999999999999999999996 99999987522 1222332 2334556654 789999999996422
Q ss_pred cc-ccccHHHHhcCCCCcEEEEcCCC
Q 006864 297 TS-KIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 297 t~-~li~~~~l~~mk~gailIN~aRg 321 (628)
.. ..+.. +.++++.+++|+.-.
T Consensus 195 ~~~~~i~~---~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 195 ADLPPLPA---DVLGEAALAYELAYG 217 (272)
T ss_dssp TCCCCCCG---GGGTTCSEEEESSCS
T ss_pred CCCCCCCH---HHhCcCCEEEEeecC
Confidence 11 12332 235677777777544
No 179
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.33 E-value=0.00064 Score=74.18 Aligned_cols=135 Identities=18% Similarity=0.180 Sum_probs=79.3
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHH--------------------HHcC-Ccc-cCHHHHhccCCEE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKA--------------------RAVG-VEL-VSFDQALATADFI 287 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a--------------------~~~g-~~~-~sl~ell~~aDvV 287 (628)
++|+|||+|-+|..+|..+...|++|++||.....-.. .+.| ..+ .+.++.++.||++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~~ 101 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDAT 101 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCce
Confidence 68999999999999999999999999999965321101 1112 122 2678889999999
Q ss_pred EEcCCCCcccccccc--------HHHHhcCC---CCcEEEEcCCCchhcHHHH-HHHHhCCCeeEEEee-ccCCCCCCCC
Q 006864 288 SLHMPLNPTTSKIFN--------DETFAKMK---KGVRIVNVARGGVIDEEAL-VRALDSGVVAQAALD-VFTEEPPAKD 354 (628)
Q Consensus 288 ~l~~Plt~~t~~li~--------~~~l~~mk---~gailIN~aRg~~vde~aL-~~aL~~g~i~ga~lD-V~~~EP~~~~ 354 (628)
++|+|......+-.| +..-..|+ +|.++|.-+.-.+=-.+.+ ...+.+.. .|.-++ +|.+|-+.+.
T Consensus 102 ~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~~~PErl~eG 180 (444)
T 3vtf_A 102 FIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVASNPEFLREG 180 (444)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEEECCCCCCTT
T ss_pred EEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceeecCcccccCC
Confidence 999984222111111 12222343 6789999877555333333 23333321 011111 3456655433
Q ss_pred C---ccccCCcEEE
Q 006864 355 S---KLVQHENVTV 365 (628)
Q Consensus 355 ~---~L~~~~nvil 365 (628)
. .++..+++++
T Consensus 181 ~a~~d~~~~~riVi 194 (444)
T 3vtf_A 181 SALEDFFKPDRIVI 194 (444)
T ss_dssp SHHHHHHSCSCEEE
T ss_pred ccccccccCCcEEE
Confidence 3 3456677763
No 180
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.31 E-value=0.0005 Score=71.94 Aligned_cols=86 Identities=13% Similarity=0.139 Sum_probs=62.7
Q ss_pred cCCeEEEEecChhHHHHHHHHHc-CC-CEEEEECCCCCh-h-HHHHc-----CCcccCHHHHhccCCEEEEcCCCCcccc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKG-LG-MNVIAHDPYAPA-D-KARAV-----GVELVSFDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~-~G-~~V~~~d~~~~~-~-~a~~~-----g~~~~sl~ell~~aDvV~l~~Plt~~t~ 298 (628)
..+++||||.|.+|+.+++.+.. ++ -+|.+||+.... + .+... .+...++++++ ++|+|++++|.. .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~---~ 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSR---K 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCS---S
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCC---C
Confidence 35799999999999999999876 44 589999987522 1 12221 12334789999 999999999954 3
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aR 320 (628)
.++.. +.+++|..+++++.
T Consensus 200 pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 200 PVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp CCBCG---GGCCTTCEEEECSC
T ss_pred ceecH---HHcCCCeEEEECCC
Confidence 44543 45789998888853
No 181
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.31 E-value=0.00021 Score=74.07 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=69.1
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcccC----------H-HHHhccCCEEEEcCCCCccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVS----------F-DQALATADFISLHMPLNPTT 297 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~s----------l-~ell~~aDvV~l~~Plt~~t 297 (628)
++|+|||.|.||..+|..|. .|.+|.++++... .+..++.|+...+ . .+....+|+|++++|-. ++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 68999999999999999999 8999999998752 2334444543221 1 24567899999999833 23
Q ss_pred cccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeE
Q 006864 298 SKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQ 340 (628)
Q Consensus 298 ~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~g 340 (628)
...+ +.++.+.++. ||.+.-| +-.++.+.+.+...++.+
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nG-i~~~e~l~~~~~~~~vl~ 119 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNG-MGHIHDLKDWHVGHSIYV 119 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSS-SHHHHHHHTCCCSCEEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCC-ccHHHHHHHhCCCCcEEE
Confidence 3332 2334445666 8887655 334455666555555543
No 182
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.29 E-value=0.0015 Score=69.77 Aligned_cols=94 Identities=24% Similarity=0.255 Sum_probs=75.2
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCC----CCh----------hHHHHcCC--cccCHHHHhccCCE
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPY----APA----------DKARAVGV--ELVSFDQALATADF 286 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~----~~~----------~~a~~~g~--~~~sl~ell~~aDv 286 (628)
|..+...++.|+|.|..|..+|+.|.+.|. +|+.+|+. ... ..+..... ...+|.|.++.+|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 557889999999999999999999999998 89999987 211 11222111 13479999999999
Q ss_pred EEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006864 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 287 V~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~ 322 (628)
++-+. +-+++.++.++.|+++++|+.+++..
T Consensus 267 lIG~S-----ap~l~t~emVk~Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 267 FIGVS-----RGNILKPEWIKKMSRKPVIFALANPV 297 (388)
T ss_dssp EEECS-----CSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred EEEeC-----CCCccCHHHHHhcCCCCEEEEcCCCC
Confidence 98763 24899999999999999999999755
No 183
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.28 E-value=0.00034 Score=72.79 Aligned_cols=103 Identities=15% Similarity=0.176 Sum_probs=67.1
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHHH--H-------c--C--Ccc-cCHHHHhccCCEEEEcCCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKAR--A-------V--G--VEL-VSFDQALATADFISLHMPL 293 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~--~-------~--g--~~~-~sl~ell~~aDvV~l~~Pl 293 (628)
.++|+|||.|.||..+|..|...|+ +|..||+........ + . . +.. .++ +.++.||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999988888 999999875322110 0 0 1 222 356 778999999999953
Q ss_pred Cccccccc-------c----H---HHHhcCCCCcEEEEcCCCchhcHHHHHHHH
Q 006864 294 NPTTSKIF-------N----D---ETFAKMKKGVRIVNVARGGVIDEEALVRAL 333 (628)
Q Consensus 294 t~~t~~li-------~----~---~~l~~mk~gailIN~aRg~~vde~aL~~aL 333 (628)
.. ..++- + + +.+....+++++++++.+.-+....+.+..
T Consensus 83 p~-~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PG-RPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SS-CCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CC-CCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 21 11110 0 1 122333569999999876555555555543
No 184
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.23 E-value=0.00054 Score=71.27 Aligned_cols=64 Identities=23% Similarity=0.402 Sum_probs=51.4
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCcccCHHHHhc--cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVELVSFDQALA--TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~~~sl~ell~--~aDvV~l~~Pl 293 (628)
.+|||||+|.||+..++.++.. ++++. ++|+.... ..+...|+.+.+++++++ ++|+|++++|-
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCc
Confidence 4799999999999999999875 78877 58887522 234556777558999998 89999999984
No 185
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.21 E-value=0.00076 Score=72.21 Aligned_cols=87 Identities=20% Similarity=0.220 Sum_probs=60.1
Q ss_pred CeEEEEecChhHHHHHHHHHc-CCCEEEEECCCCC-hhHH----HHcC------------C------c-c-cCHHHHhcc
Q 006864 230 KTLAVMGFGKVGSEVARRAKG-LGMNVIAHDPYAP-ADKA----RAVG------------V------E-L-VSFDQALAT 283 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~-~G~~V~~~d~~~~-~~~a----~~~g------------~------~-~-~sl~ell~~ 283 (628)
++|+|||.|.||..+|..|.. .|.+|.+||++.. .+.. ...+ . . . .+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 479999999999999999977 5999999993321 1111 1111 1 1 1 268888999
Q ss_pred CCEEEEcCCCCccccccccHHHHhcCCCCcEEEEc
Q 006864 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 284 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 318 (628)
||+|++++|-.. .+.++ ++.-..++++++|+..
T Consensus 83 aD~Vilav~~~~-~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFA-HEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHH-HHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999443 33332 2333457789999985
No 186
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.19 E-value=0.00092 Score=69.43 Aligned_cols=109 Identities=20% Similarity=0.217 Sum_probs=67.4
Q ss_pred CeEEEEecChhHHHHHHHHHc--CCCEEEEECCCCChhHHH----Hc-------C--Ccc-cCHHHHhccCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKG--LGMNVIAHDPYAPADKAR----AV-------G--VEL-VSFDQALATADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~--~G~~V~~~d~~~~~~~a~----~~-------g--~~~-~sl~ell~~aDvV~l~~Pl 293 (628)
++|+|||.|.+|..+|..|.. +|.+|..||+........ .. . +.. .++++ ++.||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999976 589999999875322211 11 1 112 35666 8999999999984
Q ss_pred Ccccccc-------ccH-------HHHhcCCCCcEEEEcCCCchhcH--HHHHHH--HhCCCeeEEE
Q 006864 294 NPTTSKI-------FND-------ETFAKMKKGVRIVNVARGGVIDE--EALVRA--LDSGVVAQAA 342 (628)
Q Consensus 294 t~~t~~l-------i~~-------~~l~~mk~gailIN~aRg~~vde--~aL~~a--L~~g~i~ga~ 342 (628)
. ...++ .|. +.+....+++++++++- .+|. ..+.+. +...++.|.|
T Consensus 80 p-~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN--P~~~~~~~~~~~~~~~~~rviG~g 143 (310)
T 1guz_A 80 P-RKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN--PLDIMTHVAWVRSGLPKERVIGMA 143 (310)
T ss_dssp C-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS--SHHHHHHHHHHHHCSCGGGEEEEC
T ss_pred C-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC--chHHHHHHHHHhcCCChHHEEECC
Confidence 3 22222 111 12222357889999843 3433 233332 3344666653
No 187
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.18 E-value=0.00092 Score=69.71 Aligned_cols=110 Identities=15% Similarity=0.118 Sum_probs=67.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCCh-hH-HHHc--------C--CcccCHHHHhccCCEEEEcCCCCc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPA-DK-ARAV--------G--VELVSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~-~~-a~~~--------g--~~~~sl~ell~~aDvV~l~~Plt~ 295 (628)
++|+|||.|.||..+|..|...|+ +|..||+.... +. ...+ . +...+ .+.++.||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 479999999999999999988888 99999986421 11 1111 1 11124 356789999999999543
Q ss_pred cccccc-----------cHHH---HhcCCCCcEEEEcCCCchhcHHHHHHHH--hCCCeeEE
Q 006864 296 TTSKIF-----------NDET---FAKMKKGVRIVNVARGGVIDEEALVRAL--DSGVVAQA 341 (628)
Q Consensus 296 ~t~~li-----------~~~~---l~~mk~gailIN~aRg~~vde~aL~~aL--~~g~i~ga 341 (628)
. .++- -++. +....+++++|+++-+--+....+.+.. ...++.|.
T Consensus 80 ~-~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 80 K-PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp C-SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 2 1110 0222 2233578899988654433333333332 34456554
No 188
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.15 E-value=0.00083 Score=69.14 Aligned_cols=103 Identities=15% Similarity=0.163 Sum_probs=65.6
Q ss_pred CCeEEEEecChhHHH-HHHHHHc-CCCEEE-EECCCCCh--hHHHHcCCc-ccCHHHHhccCCEEEEcCCCCcccccccc
Q 006864 229 GKTLAVMGFGKVGSE-VARRAKG-LGMNVI-AHDPYAPA--DKARAVGVE-LVSFDQALATADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 229 GktiGIIGlG~IG~~-vA~~l~~-~G~~V~-~~d~~~~~--~~a~~~g~~-~~sl~ell~~aDvV~l~~Plt~~t~~li~ 302 (628)
-.++||||+|.||+. +++.++. -++++. ++|+.... ..+...|+. +.++++++++.|+|++++|-.. ..
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~--h~--- 80 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTET--HY--- 80 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGG--HH---
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHh--HH---
Confidence 368999999999996 8888876 468887 58887522 233455664 4589999999999999999332 21
Q ss_pred HHHHhcCCCCc-EEEE-cCCCchhcHHHHHHHHhCC
Q 006864 303 DETFAKMKKGV-RIVN-VARGGVIDEEALVRALDSG 336 (628)
Q Consensus 303 ~~~l~~mk~ga-ilIN-~aRg~~vde~aL~~aL~~g 336 (628)
+-....++.|. +++. ..--.+-+.+.|.++.++.
T Consensus 81 ~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~ 116 (308)
T 3uuw_A 81 EIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKK 116 (308)
T ss_dssp HHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHc
Confidence 11122234443 3332 2223444555666666553
No 189
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.15 E-value=0.00091 Score=69.11 Aligned_cols=79 Identities=16% Similarity=0.242 Sum_probs=65.5
Q ss_pred ceeeecCCeEEEEecChh-HHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccc
Q 006864 223 VGVSLVGKTLAVMGFGKV-GSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li 301 (628)
.+.++.||++.|||-+.| |+.+|..|...++.|..+.... .+|.+.+++||+|+.++.. .+++
T Consensus 173 ~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T------------~dl~~~~~~ADIvV~A~G~----p~~i 236 (303)
T 4b4u_A 173 NNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT------------QNLPELVKQADIIVGAVGK----AELI 236 (303)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHHTCSEEEECSCS----TTCB
T ss_pred HCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC------------CCHHHHhhcCCeEEeccCC----CCcc
Confidence 467899999999998865 9999999999999999886542 2588899999999998762 3567
Q ss_pred cHHHHhcCCCCcEEEEcCC
Q 006864 302 NDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aR 320 (628)
..+. .|+|+++||++-
T Consensus 237 ~~d~---vk~GavVIDVGi 252 (303)
T 4b4u_A 237 QKDW---IKQGAVVVDAGF 252 (303)
T ss_dssp CGGG---SCTTCEEEECCC
T ss_pred cccc---ccCCCEEEEece
Confidence 6654 599999999983
No 190
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.14 E-value=0.00045 Score=65.47 Aligned_cols=70 Identities=16% Similarity=0.192 Sum_probs=57.7
Q ss_pred CcEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCC--CCHHHHHHHhcccCcccc
Q 006864 558 GNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE--PNQDSLKEIGKVHFVARI 627 (628)
Q Consensus 558 ~~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~--~~~~~l~~L~~l~~v~~v 627 (628)
.|.|-+...|+||++++|+.+|++.|+||.++.++..+..+.+.+.|.++.. .-+.+.++|+++++|.+|
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d~~~leqI~kqL~Kl~dV~~V 74 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRV 74 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEE
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEeccHHHHHHHHHHHcCCCCEEEE
Confidence 3677778899999999999999999999999999876666788888788743 223678888888888775
No 191
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.14 E-value=0.00054 Score=63.08 Aligned_cols=90 Identities=12% Similarity=0.094 Sum_probs=58.0
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh---hHH--HHcCCccc--------CHHHH-hccCCEEEEcCCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA---DKA--RAVGVELV--------SFDQA-LATADFISLHMPL 293 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~a--~~~g~~~~--------sl~el-l~~aDvV~l~~Pl 293 (628)
..+++.|+|+|.+|+.+++.|...|++|.+.|+.... ... ...|+..+ .++++ +..+|+|+++++-
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 3578999999999999999999999999999986311 111 12244321 24454 7899999999984
Q ss_pred CccccccccHHHHhcCCCCcEEEEcC
Q 006864 294 NPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 294 t~~t~~li~~~~l~~mk~gailIN~a 319 (628)
.+ .++.-......+.+...+|...
T Consensus 82 d~--~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 82 DA--DNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp HH--HHHHHHHHHHHHTSSSCEEEEC
T ss_pred hH--HHHHHHHHHHHHCCCCEEEEEE
Confidence 32 2333233444454444444433
No 192
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.13 E-value=0.00074 Score=70.61 Aligned_cols=64 Identities=27% Similarity=0.390 Sum_probs=50.1
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCcc-cCHHHHhc--cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVEL-VSFDQALA--TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~~-~sl~ell~--~aDvV~l~~Pl 293 (628)
.+|||||+|.||+..++.++.. +++++ ++|+.... ..+...|+.. .+++++++ ++|+|++++|-
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCc
Confidence 4799999999999999999876 68877 57886522 2234456543 48999998 89999999994
No 193
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.12 E-value=0.00054 Score=70.95 Aligned_cols=64 Identities=20% Similarity=0.277 Sum_probs=47.5
Q ss_pred CeEEEEecChhHHHHHHHHHcCC--CEEEEECCCCChh--HHHHcC---------Ccc--cCHHHHhccCCEEEEcCCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLG--MNVIAHDPYAPAD--KARAVG---------VEL--VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~~--~a~~~g---------~~~--~sl~ell~~aDvV~l~~Plt 294 (628)
++|+|||.|.||..+|..|...| .+|..||+..... .+..++ +.. .++ +.++.||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998777 6999999864211 111111 222 356 7789999999999953
No 194
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.10 E-value=0.0008 Score=70.73 Aligned_cols=65 Identities=9% Similarity=0.186 Sum_probs=50.9
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCcc-cCHHHHh--ccCCEEEEcCCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVEL-VSFDQAL--ATADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~~-~sl~ell--~~aDvV~l~~Plt 294 (628)
.+|||||+|.||+..++.++.. ++++. ++|+.... ..+...|+.. .++++++ .+.|+|++++|-.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 77 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPND 77 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChH
Confidence 4799999999999999999887 78866 57887522 2234557654 4899999 5699999999954
No 195
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.09 E-value=0.0015 Score=67.52 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=67.4
Q ss_pred CeEEEEecChhHHH-HHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCcc-cCHHHHhccCCEEEEcCCCCccccccccH
Q 006864 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAPA--DKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 230 ktiGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~~-~sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
.+|||||+|.||+. +++.++.. ++++. ++|+.... ..++..|+.. .+++++..++|+|++++|-... -+
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h-----~~ 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASH-----FD 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHH-----HH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhH-----HH
Confidence 47999999999997 88888764 67876 78887633 2344456653 3677776789999999994321 12
Q ss_pred HHHhcCCCCc-EEEEc-CCCchhcHHHHHHHHhCCC
Q 006864 304 ETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDSGV 337 (628)
Q Consensus 304 ~~l~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~ 337 (628)
-....++.|. +++.- .-..+-+.+.|.++.++..
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g 116 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKK 116 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 2223355665 55542 2234456667777776643
No 196
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.08 E-value=0.0011 Score=68.14 Aligned_cols=91 Identities=19% Similarity=0.252 Sum_probs=61.5
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHHHHc--CCcccCHHHH--hccCCEEEEcCCCC--cc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKARAV--GVELVSFDQA--LATADFISLHMPLN--PT 296 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~--g~~~~sl~el--l~~aDvV~l~~Plt--~~ 296 (628)
+.++.||++.|+|.|.+|++++..|...|. +|.+++|.. ++++++ .+...+++++ + ++|+|+.++|.. ++
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~--~ka~~La~~~~~~~~~~l~~l-~~DivInaTp~Gm~~~ 193 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP--EKTSEIYGEFKVISYDELSNL-KGDVIINCTPKGMYPK 193 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH--HHHHHHCTTSEEEEHHHHTTC-CCSEEEECSSTTSTTS
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH--HHHHHHHHhcCcccHHHHHhc-cCCEEEECCccCccCC
Confidence 345789999999999999999999999998 999999864 333332 2222333333 4 899999999963 22
Q ss_pred cc-ccccHHHHhcCCCCcEEEEcCC
Q 006864 297 TS-KIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 297 t~-~li~~~~l~~mk~gailIN~aR 320 (628)
.. -.+..+. ++++.+++|+.-
T Consensus 194 ~~~~pi~~~~---l~~~~~v~DlvY 215 (282)
T 3fbt_A 194 EGESPVDKEV---VAKFSSAVDLIY 215 (282)
T ss_dssp TTCCSSCHHH---HTTCSEEEESCC
T ss_pred CccCCCCHHH---cCCCCEEEEEee
Confidence 11 1233333 356666677653
No 197
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.08 E-value=0.0007 Score=69.41 Aligned_cols=94 Identities=16% Similarity=0.226 Sum_probs=65.1
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh--hHHHHcC----------CcccCHHHHhccCCEEEEcCC
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVG----------VELVSFDQALATADFISLHMP 292 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----------~~~~sl~ell~~aDvV~l~~P 292 (628)
.++.||++.|+|.|.||+++|+.|...| +|+++|+.... ..+.+.+ +...++.+.+.++|+|+.++|
T Consensus 124 ~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 124 GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 202 (287)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCC
Confidence 3578999999999999999999999999 99999986421 1111111 112233566788999999998
Q ss_pred CCcccc---ccccHHHHhcCCCCcEEEEcCCC
Q 006864 293 LNPTTS---KIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 293 lt~~t~---~li~~~~l~~mk~gailIN~aRg 321 (628)
...... ..+. ..+.++++.+++|+...
T Consensus 203 ~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~ 232 (287)
T 1nvt_A 203 IGMYPNIDVEPIV--KAEKLREDMVVMDLIYN 232 (287)
T ss_dssp TTCTTCCSSCCSS--CSTTCCSSSEEEECCCS
T ss_pred CCCCCCCCCCCCC--CHHHcCCCCEEEEeeeC
Confidence 654211 0120 13457889999998764
No 198
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=97.03 E-value=0.00099 Score=55.91 Aligned_cols=62 Identities=18% Similarity=0.112 Sum_probs=47.6
Q ss_pred cEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeC--CCC-CHHHHHHHhccc
Q 006864 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVD--EEP-NQDSLKEIGKVH 622 (628)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD--~~~-~~~~l~~L~~l~ 622 (628)
..|.+..+|+||+++.|+++|+++|+||.+++..+.. +...+.+.++ ... -++++++|+++.
T Consensus 6 ~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~--~~~~~~i~v~~~~~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 6 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD--EYFTMMAVVSSDEKQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET--TEEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc--CEEEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4566778999999999999999999999999998764 6777766663 322 246777777653
No 199
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.02 E-value=0.0014 Score=67.87 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=63.6
Q ss_pred eEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCC-c-ccCHHHHh-ccCCEEEEcCCCCccccccccH
Q 006864 231 TLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGV-E-LVSFDQAL-ATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~-~-~~sl~ell-~~aDvV~l~~Plt~~t~~li~~ 303 (628)
++||||+|.||+.+++.++.. ++++. ++|+.... ..+...|. . +.++++++ .++|+|++++|-. ... +
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~--~h~---~ 77 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNS--LHF---A 77 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGG--GHH---H
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChH--HHH---H
Confidence 799999999999999999876 57765 67876422 22334454 3 34899999 7899999999932 221 1
Q ss_pred HHHhcCCCCc-EEEEc-CCCchhcHHHHHHHHhCC
Q 006864 304 ETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDSG 336 (628)
Q Consensus 304 ~~l~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g 336 (628)
-..+.++.|. +++.- .--.+-+.+.|.++.++.
T Consensus 78 ~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~ 112 (325)
T 2ho3_A 78 QAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKN 112 (325)
T ss_dssp HHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHc
Confidence 1222344554 44442 222334455666666543
No 200
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.02 E-value=0.00078 Score=69.26 Aligned_cols=92 Identities=17% Similarity=0.189 Sum_probs=63.3
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChh--HHHHcC-----Cc--c---cCHHHHhccCCEEEEcCC
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPAD--KARAVG-----VE--L---VSFDQALATADFISLHMP 292 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~--~a~~~g-----~~--~---~sl~ell~~aDvV~l~~P 292 (628)
.+.||++.|+|.|.+|+.++..|...|. +|.++++..... .++..+ +. . .++++.++++|+|+.++|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 5789999999999999999999999998 799999875321 111111 11 1 267788899999999999
Q ss_pred CCcccc--ccccHHHHhcCCCCcEEEEcCC
Q 006864 293 LNPTTS--KIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 293 lt~~t~--~li~~~~l~~mk~gailIN~aR 320 (628)
..-... -.+. .+.++++.+++|+.-
T Consensus 204 ~Gm~~~~~~pi~---~~~l~~~~~v~DlvY 230 (283)
T 3jyo_A 204 MGMPAHPGTAFD---VSCLTKDHWVGDVVY 230 (283)
T ss_dssp TTSTTSCSCSSC---GGGCCTTCEEEECCC
T ss_pred CCCCCCCCCCCC---HHHhCCCCEEEEecC
Confidence 642111 1122 233566666666654
No 201
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.00 E-value=0.0012 Score=68.89 Aligned_cols=65 Identities=11% Similarity=0.092 Sum_probs=50.7
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCc--ccCHHHHhc--cCCEEEEcCCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVE--LVSFDQALA--TADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~--~~sl~ell~--~aDvV~l~~Plt 294 (628)
.++||||+|.||+.+++.++.. ++++. ++|+.... ..+...|+. +.++++++. ++|+|++++|-.
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQ 78 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGG
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCH
Confidence 4899999999999999999875 67877 57887532 234455663 458999998 799999999943
No 202
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.00 E-value=0.0013 Score=68.18 Aligned_cols=103 Identities=12% Similarity=0.157 Sum_probs=64.3
Q ss_pred CeEEEEecChhHH-HHHHHHHcC-CCEEEEECCCCCh--hHHHHcCCc--ccCHHHHh-ccCCEEEEcCCCCcccccccc
Q 006864 230 KTLAVMGFGKVGS-EVARRAKGL-GMNVIAHDPYAPA--DKARAVGVE--LVSFDQAL-ATADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 230 ktiGIIGlG~IG~-~vA~~l~~~-G~~V~~~d~~~~~--~~a~~~g~~--~~sl~ell-~~aDvV~l~~Plt~~t~~li~ 302 (628)
.++||||+|.||+ .+++.++.. +.++.++|+.... ..+...|+. ..+..+++ .++|+|++++|-. ...
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~--~h~--- 77 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATD--VHS--- 77 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGG--GHH---
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCch--hHH---
Confidence 3799999999999 499988765 6788889987522 233455665 34555666 7899999999932 221
Q ss_pred HHHHhcCCCCc-EEEEc-CCCchhcHHHHHHHHhCCC
Q 006864 303 DETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDSGV 337 (628)
Q Consensus 303 ~~~l~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~ 337 (628)
+-..+.++.|. +++.- .--.+-+.+.|.++.++..
T Consensus 78 ~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g 114 (323)
T 1xea_A 78 TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHH 114 (323)
T ss_dssp HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcC
Confidence 12223345554 55542 1223345556777665543
No 203
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.00 E-value=0.0013 Score=68.14 Aligned_cols=100 Identities=15% Similarity=0.207 Sum_probs=63.0
Q ss_pred eEEEEecChhHHHH-HHHHHcCCCEEE-EECCCCCh--hHHHHcCCc--ccCHHHHhc--cCCEEEEcCCCCcccccccc
Q 006864 231 TLAVMGFGKVGSEV-ARRAKGLGMNVI-AHDPYAPA--DKARAVGVE--LVSFDQALA--TADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 231 tiGIIGlG~IG~~v-A~~l~~~G~~V~-~~d~~~~~--~~a~~~g~~--~~sl~ell~--~aDvV~l~~Plt~~t~~li~ 302 (628)
++||||+|.||+.+ ++.++..+++++ ++|+.... ..+...|+. +.+++++++ ++|+|++++|-. .. -
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~--~h---~ 76 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNE--LH---R 76 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGG--GH---H
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChh--Hh---H
Confidence 79999999999998 777766778876 57887522 223455663 348999997 499999999932 21 1
Q ss_pred HHHHhcCCCCc-EEEEc-CCCchhcHHHHHHHHhC
Q 006864 303 DETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDS 335 (628)
Q Consensus 303 ~~~l~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~ 335 (628)
+-....++.|. +++.- .-...-+.+.|.++.++
T Consensus 77 ~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~ 111 (332)
T 2glx_A 77 EQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAARE 111 (332)
T ss_dssp HHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH
Confidence 22223355565 33331 12233444556666554
No 204
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.98 E-value=0.01 Score=61.50 Aligned_cols=135 Identities=19% Similarity=0.129 Sum_probs=91.0
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec-ChhHHHHHHHHHc
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-GKVGSEVARRAKG 250 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl-G~IG~~vA~~l~~ 250 (628)
|...+|+|+|+-+....++- +++=++.+.+++ | .+.|.+|+++|= +++..+.+..+..
T Consensus 118 a~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~------------------g-~l~gl~ia~vGD~~rva~Sl~~~~~~ 176 (301)
T 2ef0_A 118 ARHAKVPVVNALSDRAHPLQ--ALADLLTLKEVF------------------G-GLAGLEVAWVGDGNNVLNSLLEVAPL 176 (301)
T ss_dssp HHHCSSCEEEEECSSCCHHH--HHHHHHHHHHHH------------------S-CCTTCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHCCCCEEeCCCCccCchH--HHHHHHHHHHHh------------------C-CcCCcEEEEECCCchhHHHHHHHHHH
Confidence 33457899997665544432 333333333311 2 478999999997 8999999999999
Q ss_pred CCCEEEEECCCC--Ch-hHHHHcCCcc-cCHHHHhccCCEEEEcCCCC------cc------ccccccHHHHhcCCCCcE
Q 006864 251 LGMNVIAHDPYA--PA-DKARAVGVEL-VSFDQALATADFISLHMPLN------PT------TSKIFNDETFAKMKKGVR 314 (628)
Q Consensus 251 ~G~~V~~~d~~~--~~-~~a~~~g~~~-~sl~ell~~aDvV~l~~Plt------~~------t~~li~~~~l~~mk~gai 314 (628)
||++|....|.. +. +......+.. .++++.++.||+|..-.=.. .. ....++.+.++++|++++
T Consensus 177 ~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai 256 (301)
T 2ef0_A 177 AGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGV 256 (301)
T ss_dssp HTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCE
T ss_pred cCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcE
Confidence 999999998854 22 2222223543 48999999999998833210 01 135578999999999999
Q ss_pred EEEcC---CCchhcHH
Q 006864 315 IVNVA---RGGVIDEE 327 (628)
Q Consensus 315 lIN~a---Rg~~vde~ 327 (628)
|.-|. ||.=|+.+
T Consensus 257 ~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 257 FLHCLPAHYGEETTEE 272 (301)
T ss_dssp EEECSCCCBTTTBCHH
T ss_pred EECCCCCCCCCccCHH
Confidence 99996 55544443
No 205
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.97 E-value=0.0008 Score=69.72 Aligned_cols=110 Identities=15% Similarity=0.125 Sum_probs=65.9
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChh--HHHHcC--------Ccc--cCHHHHhccCCEEEEcCCCCc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPAD--KARAVG--------VEL--VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~--~a~~~g--------~~~--~sl~ell~~aDvV~l~~Plt~ 295 (628)
++|+|||.|.+|..+|..|...|+ +|..||...... .+.++. ... .+ .+.++.||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 479999999999999999998898 999999864211 111111 111 13 357899999999995332
Q ss_pred ccccc-----c--c----H---HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEE
Q 006864 296 TTSKI-----F--N----D---ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQA 341 (628)
Q Consensus 296 ~t~~l-----i--~----~---~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga 341 (628)
..++ + | + +.+....|++++++++-+-=+....+.+.....++.|.
T Consensus 80 -~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 -KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred -CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1111 0 0 1 23333468899999765444444444444434445443
No 206
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.95 E-value=0.002 Score=67.33 Aligned_cols=97 Identities=12% Similarity=0.241 Sum_probs=65.2
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCC-hhHHHH--------cCC--ccc---C---HHHHhccCC
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAP-ADKARA--------VGV--ELV---S---FDQALATAD 285 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~~--------~g~--~~~---s---l~ell~~aD 285 (628)
+.++.||++.|+|.|.+|++++..|...|. +|.+++|... .+++++ .++ ... + +.+.+.++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 456889999999999999999999999998 8999998732 222221 121 122 2 456678999
Q ss_pred EEEEcCCCC--ccc-cccccHHHHhcCCCCcEEEEcCCCc
Q 006864 286 FISLHMPLN--PTT-SKIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 286 vV~l~~Plt--~~t-~~li~~~~l~~mk~gailIN~aRg~ 322 (628)
+|+.++|.. +.. ...+. ....++++.+++|+.-..
T Consensus 229 iIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 229 IFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP 266 (315)
T ss_dssp EEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS
T ss_pred EEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC
Confidence 999999964 211 11121 223467777777776443
No 207
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.94 E-value=0.002 Score=67.59 Aligned_cols=113 Identities=19% Similarity=0.195 Sum_probs=70.4
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHH--H-------HcC----Ccc-cCHHHHhccCCEEEEcC--C
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKA--R-------AVG----VEL-VSFDQALATADFISLHM--P 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a--~-------~~g----~~~-~sl~ell~~aDvV~l~~--P 292 (628)
++|+|||.|.+|..+|..|...|+ +|..||........ . ..+ +.. .++++.++.||+|++++ |
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~p 89 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGLT 89 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCCC
Confidence 689999999999999999988887 99999987532111 1 011 122 37888899999999999 6
Q ss_pred CCccc------cccc---c----H---HHHhcCCCCcEEEEcCCCchhcHHHHHHHH--hCCCeeEEE
Q 006864 293 LNPTT------SKIF---N----D---ETFAKMKKGVRIVNVARGGVIDEEALVRAL--DSGVVAQAA 342 (628)
Q Consensus 293 lt~~t------~~li---~----~---~~l~~mk~gailIN~aRg~~vde~aL~~aL--~~g~i~ga~ 342 (628)
..+.. +..+ | + +.+....|.+++++++-.-=+....+.+.- ...++.|.+
T Consensus 90 ~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~~~~~~~~~~rviG~g 157 (331)
T 1pzg_A 90 KVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGMA 157 (331)
T ss_dssp SCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred CCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHHHHhcCCChhcEEecc
Confidence 54432 1110 0 1 223334588999988543323333333322 333565553
No 208
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.94 E-value=0.00063 Score=64.53 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=56.9
Q ss_pred cEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCC--CCHHHHHHHhcccCcccc
Q 006864 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE--PNQDSLKEIGKVHFVARI 627 (628)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~--~~~~~l~~L~~l~~v~~v 627 (628)
|.|-+...|+||++++|+.++.+.|+||.++.++.....+.+.|.|.++.. .-+.+.++|.++.+|.+|
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d~~~leql~kQL~Kl~dV~~V 75 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKL 75 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEeccHHHHHHHHHHhcCCCCEEEE
Confidence 677778899999999999999999999999999877666788887777633 333677788888888765
No 209
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.89 E-value=0.00097 Score=70.08 Aligned_cols=63 Identities=22% Similarity=0.298 Sum_probs=50.2
Q ss_pred CeEEEEecChhHHHHHHHHHcC--CCEEE-EECCCCCh--hHHHHcCCcc-cCHHHHhc--cCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL--GMNVI-AHDPYAPA--DKARAVGVEL-VSFDQALA--TADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~g~~~-~sl~ell~--~aDvV~l~~P 292 (628)
.++||||+|.||+..++.++.. +++++ ++|+.... ..++..|+.. .+++++++ +.|+|++++|
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 84 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTP 84 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSC
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCC
Confidence 4899999999999999999876 78866 67887522 2344567754 48999997 7999999999
No 210
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.89 E-value=0.0015 Score=59.90 Aligned_cols=58 Identities=16% Similarity=0.216 Sum_probs=46.5
Q ss_pred cEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCCCCHHHHHHHhc
Q 006864 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEEPNQDSLKEIGK 620 (628)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~~~~~~l~~L~~ 620 (628)
+.+.+..+|+||+++++.+.|+++||||.+|...+ .++.+.+++.+++ .+.+.+.|.+
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~--~~~~~~~~i~~~d--~~~A~~~L~~ 130 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA--NNNVANVVIRPSN--MDKCIEVLKE 130 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEEEEEEEESC--HHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc--cCCcEEEEEEeCC--HHHHHHHHHH
Confidence 44556789999999999999999999999988875 4567888888863 4566666655
No 211
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.88 E-value=0.0018 Score=68.20 Aligned_cols=105 Identities=10% Similarity=0.041 Sum_probs=66.1
Q ss_pred ecCCeEEEEecChhHH-HHHHHHHcC-CCEEE-EECCCCC--hhHHHHcCCcc-cCHHHHhc--cCCEEEEcCCCCcccc
Q 006864 227 LVGKTLAVMGFGKVGS-EVARRAKGL-GMNVI-AHDPYAP--ADKARAVGVEL-VSFDQALA--TADFISLHMPLNPTTS 298 (628)
Q Consensus 227 l~GktiGIIGlG~IG~-~vA~~l~~~-G~~V~-~~d~~~~--~~~a~~~g~~~-~sl~ell~--~aDvV~l~~Plt~~t~ 298 (628)
..-.++||||+|.||+ .+++.++.. +++|. ++|+... ...++..|+.. .+++++++ +.|+|++++|-.. .
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~--h 102 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVL--H 102 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGG--H
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHH--H
Confidence 3345899999999999 789988876 78876 5687642 22344567754 48999997 5899999999332 2
Q ss_pred ccccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHHHHhCC
Q 006864 299 KIFNDETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDSG 336 (628)
Q Consensus 299 ~li~~~~l~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g 336 (628)
.-+ ....++.|. +++.- ---.+-+.+.|.++.++.
T Consensus 103 ~~~---~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~ 139 (350)
T 3rc1_A 103 AEW---IDRALRAGKHVLAEKPLTTDRPQAERLFAVARER 139 (350)
T ss_dssp HHH---HHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHT
T ss_pred HHH---HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 111 222234443 33332 223445566666666554
No 212
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.83 E-value=0.003 Score=65.77 Aligned_cols=64 Identities=20% Similarity=0.345 Sum_probs=48.4
Q ss_pred CeEEEEecChhHHHHHHHHH-c-CCCEEE-EECCCCCh--hHHHHcCC-c-ccCHHHHhc--cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAK-G-LGMNVI-AHDPYAPA--DKARAVGV-E-LVSFDQALA--TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~g~-~-~~sl~ell~--~aDvV~l~~Pl 293 (628)
.+|||||+|.||+..++.++ . -+++++ ++|+.... ..++..|+ . +.+++++++ ++|+|++++|-
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~ 81 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPT 81 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCG
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 48999999999999999988 5 478865 57887532 22344566 3 348999997 69999999983
No 213
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.81 E-value=0.022 Score=59.11 Aligned_cols=127 Identities=20% Similarity=0.189 Sum_probs=87.1
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC--hhHHHHHHHHH
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAK 249 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG--~IG~~vA~~l~ 249 (628)
|...+|+|+|+-+....++- +++=++.+.+++ | .+.|.+|+++|=| ++..+.+..+.
T Consensus 112 A~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~~rva~Sl~~~~~ 170 (307)
T 2i6u_A 112 ASVATVPVINALSDEFHPCQ--VLADLQTIAERK------------------G-ALRGLRLSYFGDGANNMAHSLLLGGV 170 (307)
T ss_dssp HHHCSSCEEESCCSSCCHHH--HHHHHHHHHHHH------------------S-CCTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred HhhCCCCEEcCCCCCcCccH--HHHHHHHHHHHh------------------C-CcCCeEEEEECCCCcCcHHHHHHHHH
Confidence 34457999998765544442 333333333311 2 4789999999986 99999999999
Q ss_pred cCCCEEEEECCCC--Chh-H---H----HHcCCc---ccCHHHHhccCCEEEEcCCC-------Ccc-----ccccccHH
Q 006864 250 GLGMNVIAHDPYA--PAD-K---A----RAVGVE---LVSFDQALATADFISLHMPL-------NPT-----TSKIFNDE 304 (628)
Q Consensus 250 ~~G~~V~~~d~~~--~~~-~---a----~~~g~~---~~sl~ell~~aDvV~l~~Pl-------t~~-----t~~li~~~ 304 (628)
.||++|....|.. +.. . + ++.|.. ..++++.++.||+|..-.=. .++ ....++.+
T Consensus 171 ~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~ 250 (307)
T 2i6u_A 171 TAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSR 250 (307)
T ss_dssp HTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHH
T ss_pred HCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHH
Confidence 9999999998753 221 1 1 245633 23899999999999983320 011 12456888
Q ss_pred HHhcCCCCcEEEEcC
Q 006864 305 TFAKMKKGVRIVNVA 319 (628)
Q Consensus 305 ~l~~mk~gailIN~a 319 (628)
.++++|++++|.-|.
T Consensus 251 ~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 251 LLALADSDAIVLHCL 265 (307)
T ss_dssp HHHHSCTTCEEEECS
T ss_pred HHhhcCCCcEEECCC
Confidence 999999999999985
No 214
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.80 E-value=0.0019 Score=59.39 Aligned_cols=101 Identities=21% Similarity=0.302 Sum_probs=69.5
Q ss_pred CCeEEEEec----ChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccH
Q 006864 229 GKTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 229 GktiGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
-++|+|||. |++|..+++.|+..|++|+..+|..... .-.|+... +++|+-...|++++++|- +.....+.
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~--~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~- 88 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE--ELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP- 88 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS--EETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH-
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccC--cCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH-
Confidence 478999999 8999999999999999988888762111 11365544 799988899999999995 44555553
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
+..+ .....++++.+- . ++.+.+..++..+
T Consensus 89 ~~~~-~gi~~i~~~~g~---~-~~~~~~~a~~~Gi 118 (140)
T 1iuk_A 89 EVLA-LRPGLVWLQSGI---R-HPEFEKALKEAGI 118 (140)
T ss_dssp HHHH-HCCSCEEECTTC---C-CHHHHHHHHHTTC
T ss_pred HHHH-cCCCEEEEcCCc---C-HHHHHHHHHHcCC
Confidence 3333 333456665432 2 4566666665433
No 215
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.79 E-value=0.0027 Score=66.57 Aligned_cols=111 Identities=15% Similarity=0.213 Sum_probs=67.1
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHH------HH---c--C--Ccc-cCHHHHhccCCEEEEcC--C
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKA------RA---V--G--VEL-VSFDQALATADFISLHM--P 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a------~~---~--g--~~~-~sl~ell~~aDvV~l~~--P 292 (628)
++|+|||.|.+|..+|..+...|+ +|..||........ .. . . +.. .++ +.++.||+|++++ |
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999998888 99999987532111 00 0 1 222 356 7889999999998 4
Q ss_pred CCcc-ccc-cc--c----H---HHHhcCCCCcEEEEcCCCchhcHHHHHHHH--hCCCeeEE
Q 006864 293 LNPT-TSK-IF--N----D---ETFAKMKKGVRIVNVARGGVIDEEALVRAL--DSGVVAQA 341 (628)
Q Consensus 293 lt~~-t~~-li--~----~---~~l~~mk~gailIN~aRg~~vde~aL~~aL--~~g~i~ga 341 (628)
..+. |+. ++ | + +.+....|++++++++-.-=+....+.+.- ...++.|.
T Consensus 94 ~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAMVYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred CCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHhcCCChhhEEEe
Confidence 4322 111 10 1 1 122333488999887542222222222221 34466665
No 216
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.79 E-value=0.00095 Score=69.57 Aligned_cols=90 Identities=14% Similarity=0.117 Sum_probs=57.9
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhHHHHcC----Cc-------c-cCHHHHhccCCEEEEcCCCCc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADKARAVG----VE-------L-VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~~~g----~~-------~-~sl~ell~~aDvV~l~~Plt~ 295 (628)
++|+|||.|.||.++|..++..|. +|..||...........+ .. . .+..+.++.||+|++++|...
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~~ 86 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQ 86 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCCC
Confidence 689999999999999999986564 899999864221111111 11 0 134567899999999988543
Q ss_pred ccccc-----c--c----H---HHHhcCCCCcEEEEcCC
Q 006864 296 TTSKI-----F--N----D---ETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 296 ~t~~l-----i--~----~---~~l~~mk~gailIN~aR 320 (628)
. .++ + | . +.+....|++++++++-
T Consensus 87 ~-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 87 K-PGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp C-TTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred C-CCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 1 211 1 0 1 12233357888888754
No 217
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.78 E-value=0.0029 Score=66.15 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=48.0
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHH--HH-------c--C--Ccc-cCHHHHhccCCEEEEcC--C
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKA--RA-------V--G--VEL-VSFDQALATADFISLHM--P 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a--~~-------~--g--~~~-~sl~ell~~aDvV~l~~--P 292 (628)
++|+|||.|.+|..+|..+...|+ +|..||........ .. . . +.. .++ +.++.||+|++++ |
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGFT 83 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 589999999999999999998887 99999976532110 00 1 1 122 356 7799999999998 5
Q ss_pred CCc
Q 006864 293 LNP 295 (628)
Q Consensus 293 lt~ 295 (628)
..+
T Consensus 84 ~k~ 86 (322)
T 1t2d_A 84 KAP 86 (322)
T ss_dssp SCT
T ss_pred CCC
Confidence 443
No 218
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.78 E-value=0.0023 Score=66.54 Aligned_cols=102 Identities=14% Similarity=0.053 Sum_probs=62.4
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCc--ccCHHHHhc--cCCEEEEcCCCCccccccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVE--LVSFDQALA--TADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~--~~sl~ell~--~aDvV~l~~Plt~~t~~li 301 (628)
.++||||+|.||+..++.++.. ++++. ++|+.... ..+...|+. +.+++++++ +.|+|++++|-.. ..
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~--h~-- 81 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQD--HY-- 81 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGG--HH--
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHH--HH--
Confidence 4899999999999999998765 56666 56876532 334455663 458999998 7999999999432 21
Q ss_pred cHHHHhcCCCCcE-EEEc-CCCchhcHHHHHHHHhCC
Q 006864 302 NDETFAKMKKGVR-IVNV-ARGGVIDEEALVRALDSG 336 (628)
Q Consensus 302 ~~~~l~~mk~gai-lIN~-aRg~~vde~aL~~aL~~g 336 (628)
+-....++.|.- ++.- ---.+-+.+.|.++.++.
T Consensus 82 -~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 117 (329)
T 3evn_A 82 -KVAKAALLAGKHVLVEKPFTLTYDQANELFALAESC 117 (329)
T ss_dssp -HHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHc
Confidence 112223444433 3221 122344555666665554
No 219
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.76 E-value=0.0015 Score=68.97 Aligned_cols=64 Identities=25% Similarity=0.402 Sum_probs=50.2
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEEE-ECCCCCh-hHHHHcCCcc-cCHHHHhc--cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVIA-HDPYAPA-DKARAVGVEL-VSFDQALA--TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~~-~~a~~~g~~~-~sl~ell~--~aDvV~l~~Pl 293 (628)
.++||||+|.||+..++.++.. ++++.+ +|+.... +.+...|+.. .+++++++ +.|+|++++|-
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPN 75 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCc
Confidence 4799999999999999999877 788765 6876422 2344556654 48999998 79999999993
No 220
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.76 E-value=0.01 Score=61.46 Aligned_cols=94 Identities=15% Similarity=0.102 Sum_probs=71.2
Q ss_pred eecCCeEEEEec---ChhHHHHHHHHHcC-CCEEEEECCCC---ChhHHHHcCCcc---cCHHHHhccCCEEEEcCCCCc
Q 006864 226 SLVGKTLAVMGF---GKVGSEVARRAKGL-GMNVIAHDPYA---PADKARAVGVEL---VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 226 ~l~GktiGIIGl---G~IG~~vA~~l~~~-G~~V~~~d~~~---~~~~a~~~g~~~---~sl~ell~~aDvV~l~~Plt~ 295 (628)
.+.|++|+++|= |++..+++..+..| |++|....|.. +....++.|... .+++++++.||+|..-.=-.+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~e 225 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKE 225 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCST
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccc
Confidence 478999999998 59999999999999 99999998753 222234456542 379999999999988654321
Q ss_pred cc-----------cccccHHHHhcCCCCcEEEEcC
Q 006864 296 TT-----------SKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 296 ~t-----------~~li~~~~l~~mk~gailIN~a 319 (628)
.- ...++.+.++++|++++|.-|.
T Consensus 226 r~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 226 RFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp TSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred cccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 10 2456888888888898888885
No 221
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.76 E-value=0.0023 Score=68.45 Aligned_cols=96 Identities=22% Similarity=0.229 Sum_probs=75.4
Q ss_pred ceeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC--Ch-----------hHHHHcCC--cccCHHHHhccCCE
Q 006864 223 VGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA--PA-----------DKARAVGV--ELVSFDQALATADF 286 (628)
Q Consensus 223 ~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~--~~-----------~~a~~~g~--~~~sl~ell~~aDv 286 (628)
.|..+...+|.|+|.|..|..+|+.+.++|. +|+.+|+.. .. ..+..... ...+|.|.++.+|+
T Consensus 182 ~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV 261 (398)
T 2a9f_A 182 LKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADI 261 (398)
T ss_dssp TTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCS
T ss_pred hCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCE
Confidence 4667888999999999999999999999999 999998751 11 11111110 12369999999999
Q ss_pred EEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006864 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (628)
Q Consensus 287 V~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 323 (628)
++=.- +-+++.++.++.|+++++|+.+++...
T Consensus 262 ~IG~S-----apgl~T~EmVk~Ma~~pIIfalsNPt~ 293 (398)
T 2a9f_A 262 FIGVS-----APGVLKAEWISKMAARPVIFAMANPIP 293 (398)
T ss_dssp EEECC-----STTCCCHHHHHTSCSSCEEEECCSSSC
T ss_pred EEecC-----CCCCCCHHHHHhhCCCCEEEECCCCCc
Confidence 87652 358999999999999999999998653
No 222
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.76 E-value=0.003 Score=69.07 Aligned_cols=101 Identities=20% Similarity=0.284 Sum_probs=73.1
Q ss_pred eeeecCCeEEEEecC----------hhHHHHHHHHHcCCCEEEEECCCCChhHHHHc-CCccc-CHHHHhccCCEEEEcC
Q 006864 224 GVSLVGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKARAV-GVELV-SFDQALATADFISLHM 291 (628)
Q Consensus 224 g~~l~GktiGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~-g~~~~-sl~ell~~aDvV~l~~ 291 (628)
+..+.|++|+|+|+. .-...+++.|...|++|.+|||+...+....+ ++.++ ++++.++.||+|++++
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 557899999999997 56789999999999999999999753322233 45554 7899999999999998
Q ss_pred CCCccccccccHHHHh-cCCCCcEEEEcCCCchhcHHHH
Q 006864 292 PLNPTTSKIFNDETFA-KMKKGVRIVNVARGGVIDEEAL 329 (628)
Q Consensus 292 Plt~~t~~li~~~~l~-~mk~gailIN~aRg~~vde~aL 329 (628)
+-. +-+. ++-+.+. .|+ +.+|+|+ |+ +.|.+.+
T Consensus 397 ~~~-~f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 397 EWD-AFRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CCT-TTTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred CCH-Hhhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 733 2222 4555544 465 4678885 43 4565544
No 223
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.75 E-value=0.0022 Score=59.16 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=69.2
Q ss_pred CCeEEEEec----ChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccH
Q 006864 229 GKTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 229 GktiGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~ 303 (628)
-++|+|||. |++|..+++.|+..|++|+..+|... .-.|+... +++++....|++++++|- +....++ +
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~----~i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv-~ 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE----EVLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYV-E 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS----EETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHH-H
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCC----eECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH-H
Confidence 579999999 79999999999999999888888642 11366544 799998899999999994 4444444 2
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
+..+ ....++++.. |. .++.+.++.++..+
T Consensus 96 ~~~~-~gi~~i~~~~--g~--~~~~l~~~a~~~Gi 125 (144)
T 2d59_A 96 QAIK-KGAKVVWFQY--NT--YNREASKKADEAGL 125 (144)
T ss_dssp HHHH-HTCSEEEECT--TC--CCHHHHHHHHHTTC
T ss_pred HHHH-cCCCEEEECC--Cc--hHHHHHHHHHHcCC
Confidence 3333 3334565543 32 25667777766544
No 224
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.75 E-value=0.0016 Score=68.23 Aligned_cols=64 Identities=17% Similarity=0.259 Sum_probs=50.0
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCc--ccCHHHHhc--cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVE--LVSFDQALA--TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~--~~sl~ell~--~aDvV~l~~Pl 293 (628)
.+|||||+|.||+..++.++.. +++++ ++|+.... ..+...++. +.+++++++ ++|+|++++|-
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 3799999999999999999875 67877 57886422 234455653 458999998 89999999993
No 225
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.69 E-value=0.0016 Score=69.35 Aligned_cols=65 Identities=23% Similarity=0.393 Sum_probs=47.5
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcC----CcccC---HHHHhccCCEEEE
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVG----VELVS---FDQALATADFISL 289 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g----~~~~s---l~ell~~aDvV~l 289 (628)
.-+.||||+|+|.|.+|+.+++.++.+|++|+++|++.......... ..+.+ +.++++++|+|+.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 34789999999999999999999999999999999865221111000 11222 6678888998854
No 226
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.67 E-value=0.0079 Score=62.37 Aligned_cols=92 Identities=24% Similarity=0.300 Sum_probs=67.8
Q ss_pred eecCCeEEEEecC---hhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEcCCCCcc-----
Q 006864 226 SLVGKTLAVMGFG---KVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPT----- 296 (628)
Q Consensus 226 ~l~GktiGIIGlG---~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~----- 296 (628)
.+.|++|+++|=| ++..+.+..+..||++|.+..|.. ..+. ...| ...++++.++.||+|..-.--.+.
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~-~~~g-~~~d~~eav~~aDvvyt~~~q~er~~~~~ 221 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEE-NTFG-TYVSMDEAVESSDVVMLLRIQNERHQSAV 221 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-CSSC-EECCHHHHHHHCSEEEECCCCTTTCCSSC
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcch-hhcC-ccCCHHHHhCCCCEEEeccchhhccccch
Confidence 4789999999975 699999999999999999988743 1111 1223 345899999999999884311110
Q ss_pred ------ccccccHHHHhcCCCCcEEEEcC
Q 006864 297 ------TSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 297 ------t~~li~~~~l~~mk~gailIN~a 319 (628)
....++.+.++++|++++|.-|.
T Consensus 222 ~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 222 SQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp CSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred hHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 12347888888899999998885
No 227
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.67 E-value=0.0015 Score=67.53 Aligned_cols=99 Identities=12% Similarity=0.145 Sum_probs=60.8
Q ss_pred CeEEEEecChhHHHHHHHHHc-CCCEEE-EECCCCChhHHHHcCCcc---cCHHHHhccCCEEEEcCCCCccccccccHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKG-LGMNVI-AHDPYAPADKARAVGVEL---VSFDQALATADFISLHMPLNPTTSKIFNDE 304 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~-~G~~V~-~~d~~~~~~~a~~~g~~~---~sl~ell~~aDvV~l~~Plt~~t~~li~~~ 304 (628)
.+|||||+|+||+.+++.++. -++++. ++|+.... ++..|+.. .++.++ .++|+|++|+|-.. . -+.
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~--~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~--h---~~~ 81 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAE--VPFELQPFRVVSDIEQL-ESVDVALVCSPSRE--V---ERT 81 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------CCTTSCEESSGGGS-SSCCEEEECSCHHH--H---HHH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHH--HHHcCCCcCCHHHHHhC-CCCCEEEECCCchh--h---HHH
Confidence 489999999999999999986 468887 58876432 22256542 244444 68999999998332 1 122
Q ss_pred HHhcCCCCcEEEEcCC--C-chhcHHHHHHHHhCC
Q 006864 305 TFAKMKKGVRIVNVAR--G-GVIDEEALVRALDSG 336 (628)
Q Consensus 305 ~l~~mk~gailIN~aR--g-~~vde~aL~~aL~~g 336 (628)
....++.|.-+++..- + ...+.+.|.++.++.
T Consensus 82 ~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~ 116 (304)
T 3bio_A 82 ALEILKKGICTADSFDIHDGILALRRSLGDAAGKS 116 (304)
T ss_dssp HHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhC
Confidence 3344677877776432 1 223345666666553
No 228
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.67 E-value=0.002 Score=62.87 Aligned_cols=87 Identities=14% Similarity=0.205 Sum_probs=56.5
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hH-HHHcCCccc-----C---HHHH-hccCCEEEEcCCCCcccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DK-ARAVGVELV-----S---FDQA-LATADFISLHMPLNPTTS 298 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~-a~~~g~~~~-----s---l~el-l~~aDvV~l~~Plt~~t~ 298 (628)
+++.|+|+|.+|+.+|+.|...|.+|+++|+.... +. ....++..+ + |+++ +.+||+|++++|-.. .
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~--~ 78 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE--V 78 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH--H
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH--H
Confidence 47899999999999999999999999999986422 11 223454321 2 4444 678999999998443 2
Q ss_pred ccccHHHHhcCCCCcEEEEc
Q 006864 299 KIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~ 318 (628)
+++-......+.+...+|-.
T Consensus 79 n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 79 NLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp HHHHHHHHHHTSCCCEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEEE
Confidence 22223333333344455543
No 229
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.64 E-value=0.02 Score=59.93 Aligned_cols=127 Identities=20% Similarity=0.242 Sum_probs=86.4
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC--hhHHHHHHHHH
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAK 249 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG--~IG~~vA~~l~ 249 (628)
|...+|+|+|+-+....++- +++=++.+.++ .| .+.|.+|+++|=| ++..+.+..+.
T Consensus 131 A~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~~ 189 (325)
T 1vlv_A 131 AEYSGVPVYNGLTDEFHPTQ--ALADLMTIEEN------------------FG-RLKGVKVVFMGDTRNNVATSLMIACA 189 (325)
T ss_dssp HHHHCSCEEESCCSSCCHHH--HHHHHHHHHHH------------------HS-CSTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHH------------------hC-CcCCcEEEEECCCCcCcHHHHHHHHH
Confidence 33447999998665444432 23333333331 12 4789999999996 99999999999
Q ss_pred cCCCEEEEECCCC---ChhH---H----HHcCCc---ccCHHHHhccCCEEEEcCCC-------Ccc-----ccccccHH
Q 006864 250 GLGMNVIAHDPYA---PADK---A----RAVGVE---LVSFDQALATADFISLHMPL-------NPT-----TSKIFNDE 304 (628)
Q Consensus 250 ~~G~~V~~~d~~~---~~~~---a----~~~g~~---~~sl~ell~~aDvV~l~~Pl-------t~~-----t~~li~~~ 304 (628)
.||++|.+..|.. +.+. + ++.|.. ..++++++++||+|..-.=. .++ ....++.+
T Consensus 190 ~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~e 269 (325)
T 1vlv_A 190 KMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNER 269 (325)
T ss_dssp HTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHH
T ss_pred HCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHH
Confidence 9999999988753 2211 1 255643 23899999999999883321 011 13557889
Q ss_pred HHhcC-CCCcEEEEcC
Q 006864 305 TFAKM-KKGVRIVNVA 319 (628)
Q Consensus 305 ~l~~m-k~gailIN~a 319 (628)
.++++ |++++|.-|.
T Consensus 270 ll~~a~k~dai~mH~L 285 (325)
T 1vlv_A 270 VMEMTGKSETIFMHCL 285 (325)
T ss_dssp HHHTTCCTTCEEEECS
T ss_pred HHHhccCCCeEEECCC
Confidence 99999 9999999985
No 230
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.63 E-value=0.0013 Score=68.08 Aligned_cols=99 Identities=19% Similarity=0.291 Sum_probs=61.0
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCChhHHHHcC--Cc-ccCHHHHhc--cCCEEEEcCCCCcccccccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPADKARAVG--VE-LVSFDQALA--TADFISLHMPLNPTTSKIFN 302 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~~a~~~g--~~-~~sl~ell~--~aDvV~l~~Plt~~t~~li~ 302 (628)
.+|||||+|.||+.+++.++.. +++++ ++|+.. +.++... +. +.+++++++ ++|+|++++|-.. . -
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~--~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~--h---~ 83 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNP--DNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPAT--H---A 83 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCH--HHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGG--H---H
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHH--H---H
Confidence 4799999999999999999876 67755 678763 2221111 32 347899996 7999999999322 1 1
Q ss_pred HHHHhcCCCCc-EEEEc-CCCchhcHHHHHHHHhC
Q 006864 303 DETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDS 335 (628)
Q Consensus 303 ~~~l~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~ 335 (628)
+-..+.++.|. +++.- .--.+-+.+.|.++.++
T Consensus 84 ~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~ 118 (315)
T 3c1a_A 84 EITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKA 118 (315)
T ss_dssp HHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHH
Confidence 22223355564 44441 22233444556666544
No 231
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.63 E-value=0.0044 Score=65.48 Aligned_cols=63 Identities=22% Similarity=0.382 Sum_probs=46.6
Q ss_pred CeEEEEecChhHHH-HHHHHHcC-CCEEE-EECCCCChhHHHHc-CCc-ccCHHHHhc--cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAPADKARAV-GVE-LVSFDQALA--TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-g~~-~~sl~ell~--~aDvV~l~~Pl 293 (628)
.++||||+|.||+. .+..++.. +++|. ++|+..... .... ++. +.+++++++ +.|+|++++|-
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKV-KRDLPDVTVIASPEAAVQHPDVDLVVIASPN 77 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHH-HHHCTTSEEESCHHHHHTCTTCSEEEECSCG
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH-HhhCCCCcEECCHHHHhcCCCCCEEEEeCCh
Confidence 47999999999997 77777766 78876 568764222 2233 344 348999998 79999999983
No 232
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.62 E-value=0.016 Score=60.92 Aligned_cols=128 Identities=17% Similarity=0.164 Sum_probs=87.4
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC--hhHHHHHHHHH
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAK 249 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG--~IG~~vA~~l~ 249 (628)
|...+|+|.|.-+....++- +++=++.+.++ .|..+.|.+|+++|=| ++..+++..+.
T Consensus 118 A~~s~vPVINa~~~~~HPtQ--~LaDl~Ti~e~------------------~g~~l~gl~va~vGD~~~~va~Sl~~~~~ 177 (335)
T 1dxh_A 118 AKFAGVPVFNGLTDEYHPTQ--MLADVLTMREH------------------SDKPLHDISYAYLGDARNNMGNSLLLIGA 177 (335)
T ss_dssp HHHSSSCEEEEECSSCCHHH--HHHHHHHHHHT------------------CSSCGGGCEEEEESCCSSHHHHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcHH--HHHHHHHHHHH------------------cCCCcCCeEEEEecCCccchHHHHHHHHH
Confidence 34457999997665444432 23333333331 1325889999999996 99999999999
Q ss_pred cCCCEEEEECCCC---ChhH---H----HHcCCc---ccCHHHHhccCCEEEEcCCC--C------cc-----ccccccH
Q 006864 250 GLGMNVIAHDPYA---PADK---A----RAVGVE---LVSFDQALATADFISLHMPL--N------PT-----TSKIFND 303 (628)
Q Consensus 250 ~~G~~V~~~d~~~---~~~~---a----~~~g~~---~~sl~ell~~aDvV~l~~Pl--t------~~-----t~~li~~ 303 (628)
.|||+|....|.. +.+. + ++.|.. ..++++.++.||+|..-.=. . .+ ...-++.
T Consensus 178 ~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~ 257 (335)
T 1dxh_A 178 KLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNM 257 (335)
T ss_dssp HTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCH
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCH
Confidence 9999999988753 2211 1 245643 23899999999999883321 0 00 1246788
Q ss_pred HHHhcC-CCCcEEEEcC
Q 006864 304 ETFAKM-KKGVRIVNVA 319 (628)
Q Consensus 304 ~~l~~m-k~gailIN~a 319 (628)
+.++++ ||+++|.-|.
T Consensus 258 ~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 258 EIMKATGNPRAKFMHCL 274 (335)
T ss_dssp HHHHTTCCSSCEEEECS
T ss_pred HHHHhccCCCeEEECCC
Confidence 999999 9999999985
No 233
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.60 E-value=0.0024 Score=66.52 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=65.5
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCChhHHHHcCCcc-cCHHHHhccCCEEEEcCCCCccccccccHHHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~~a~~~g~~~-~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l 306 (628)
.+|||||+|+||+.+++.+... +++++ ++|+..... .. .|+.. .++++++.++|+|++++|-... -+...
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~-~~-~gv~~~~d~~~ll~~~DvViiatp~~~h-----~~~~~ 76 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD-TK-TPVFDVADVDKHADDVDVLFLCMGSATD-----IPEQA 76 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS-SS-SCEEEGGGGGGTTTTCSEEEECSCTTTH-----HHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHh-hc-CCCceeCCHHHHhcCCCEEEEcCCcHHH-----HHHHH
Confidence 3799999999999999999876 67765 578764321 11 34432 3678888889999999984321 12334
Q ss_pred hcCCCCcEEEEcCCCchh--cH-HHHHHHHhCCC
Q 006864 307 AKMKKGVRIVNVARGGVI--DE-EALVRALDSGV 337 (628)
Q Consensus 307 ~~mk~gailIN~aRg~~v--de-~aL~~aL~~g~ 337 (628)
..++.|.-++...-..+- +. +.|.++.+++.
T Consensus 77 ~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 77 PKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 456778777765444322 22 45566555443
No 234
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.60 E-value=0.00028 Score=72.47 Aligned_cols=94 Identities=14% Similarity=0.057 Sum_probs=63.3
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCc---c-cCHHHHh-ccCCEEEEcCCCCccccccccH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVE---L-VSFDQAL-ATADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~---~-~sl~ell-~~aDvV~l~~Plt~~t~~li~~ 303 (628)
++|+|||.|.||..+|..|...|.+|.+|++.... +.....|.. . .+..+.+ ..+|+|++++|-. ++...+ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 58999999999999999999889999999887421 111112321 1 1333444 8899999999944 344433 2
Q ss_pred HHHhcCCCCcEEEEcCCCchhc
Q 006864 304 ETFAKMKKGVRIVNVARGGVID 325 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~~vd 325 (628)
..-..++++.+||.+.-|=-..
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCCG
T ss_pred HHHHhhCCCCEEEEeccCcccH
Confidence 2333467888999998764443
No 235
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.57 E-value=0.029 Score=58.46 Aligned_cols=127 Identities=17% Similarity=0.166 Sum_probs=86.6
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec-ChhHHHHHHHHHc
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-GKVGSEVARRAKG 250 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl-G~IG~~vA~~l~~ 250 (628)
|...+|+|+|+-+....++- +++=++.+.+++ | .+.|.+|+++|= +++..+++..+..
T Consensus 119 A~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~rva~Sl~~~~~~ 177 (315)
T 1pvv_A 119 AKYATVPVINGLSDFSHPCQ--ALADYMTIWEKK------------------G-TIKGVKVVYVGDGNNVAHSLMIAGTK 177 (315)
T ss_dssp HHHCSSCEEEEECSSCCHHH--HHHHHHHHHHHH------------------S-CCTTCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcHH--HHHHHHHHHHHh------------------C-CcCCcEEEEECCCcchHHHHHHHHHH
Confidence 34456899997665444432 333333333321 2 478999999997 8999999999999
Q ss_pred CCCEEEEECCCC--Chh-H---H----HHcCCc---ccCHHHHhccCCEEEEcCCC-------Ccc-----ccccccHHH
Q 006864 251 LGMNVIAHDPYA--PAD-K---A----RAVGVE---LVSFDQALATADFISLHMPL-------NPT-----TSKIFNDET 305 (628)
Q Consensus 251 ~G~~V~~~d~~~--~~~-~---a----~~~g~~---~~sl~ell~~aDvV~l~~Pl-------t~~-----t~~li~~~~ 305 (628)
||++|.+..|.. +.. . + ++.|.. ..++++.++.||+|..-.=. .++ ....++.+.
T Consensus 178 ~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~el 257 (315)
T 1pvv_A 178 LGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDL 257 (315)
T ss_dssp TTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHH
T ss_pred CCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHH
Confidence 999999988753 221 1 1 245633 23899999999999884321 011 125578899
Q ss_pred HhcCCCCcEEEEcC
Q 006864 306 FAKMKKGVRIVNVA 319 (628)
Q Consensus 306 l~~mk~gailIN~a 319 (628)
++++|++++|.-|.
T Consensus 258 l~~a~~~ai~mH~l 271 (315)
T 1pvv_A 258 VKHAKPDYMFMHCL 271 (315)
T ss_dssp HHTSCTTCEEEECS
T ss_pred HhhcCCCcEEECCC
Confidence 99999999999985
No 236
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.56 E-value=0.0023 Score=64.76 Aligned_cols=97 Identities=14% Similarity=0.205 Sum_probs=69.3
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEE-EEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHH
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNV-IAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDET 305 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~ 305 (628)
+.++|+++|+|.||+.+++. . ++++ .+|+ .. ..++|+..+ +++++++++|+|+=|.+ .+ -+.+..
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k----~gelgv~a~~d~d~lla~pD~VVe~A~-~~----av~e~~ 77 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RI----SKDIPGVVRLDEFQVPSDVSTVVECAS-PE----AVKEYS 77 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SS----CCCCSSSEECSSCCCCTTCCEEEECSC-HH----HHHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-cc----ccccCceeeCCHHHHhhCCCEEEECCC-HH----HHHHHH
Confidence 45799999999999999998 4 7876 4567 21 112266543 69999999999977664 21 233334
Q ss_pred HhcCCCCcEEEEcCCCchhcH---HHHHHHHhCCC
Q 006864 306 FAKMKKGVRIVNVARGGVIDE---EALVRALDSGV 337 (628)
Q Consensus 306 l~~mk~gailIN~aRg~~vde---~aL~~aL~~g~ 337 (628)
..-|+.|.-+|-++-|.+.|. +.|.++.+.|.
T Consensus 78 ~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg 112 (253)
T 1j5p_A 78 LQILKNPVNYIIISTSAFADEVFRERFFSELKNSP 112 (253)
T ss_dssp HHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCS
T ss_pred HHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCC
Confidence 556899999999998888887 45566666654
No 237
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.55 E-value=0.0075 Score=65.63 Aligned_cols=108 Identities=19% Similarity=0.223 Sum_probs=72.1
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEE--------ECCCC-ChhH------------------HHHcCCcccC
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA--------HDPYA-PADK------------------ARAVGVELVS 276 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~------------------a~~~g~~~~s 276 (628)
+.++.|||+.|=|+|++|+.+|+.|...|++|++ |||.- +.+. +...|.+.++
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 4568999999999999999999999999999986 44442 2211 1122444444
Q ss_pred HHHHhc-cCCEEEEcCCCCccccccccHHHHhcCCCC--cEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 277 FDQALA-TADFISLHMPLNPTTSKIFNDETFAKMKKG--VRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 277 l~ell~-~aDvV~l~~Plt~~t~~li~~~~l~~mk~g--ailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
-++++. .||+.+=|. +.+.|+.+...+++.. .++++-|-+.+-.+ +- +.|.+..|
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A~-~iL~~rGI 367 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIE-AT-ELFQQAGV 367 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-HH-HHHHHTTC
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHH-HH-HHHHHCCC
Confidence 444443 689887765 4667888888777653 47777777665433 32 44555444
No 238
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.54 E-value=0.0029 Score=65.95 Aligned_cols=71 Identities=24% Similarity=0.359 Sum_probs=53.0
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCC-hhHHHH--------cCC--c---ccCH---HHHhccCC
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAP-ADKARA--------VGV--E---LVSF---DQALATAD 285 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~~--------~g~--~---~~sl---~ell~~aD 285 (628)
+.++.||++.|+|.|.+|++++..|...|. +|.+++|... .+++++ .+. . ..++ .+.+.++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 356889999999999999999999999998 8999998732 222221 121 1 1233 55688999
Q ss_pred EEEEcCCCC
Q 006864 286 FISLHMPLN 294 (628)
Q Consensus 286 vV~l~~Plt 294 (628)
+|+.++|..
T Consensus 223 iIINaTp~G 231 (312)
T 3t4e_A 223 ILTNGTKVG 231 (312)
T ss_dssp EEEECSSTT
T ss_pred EEEECCcCC
Confidence 999999964
No 239
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.53 E-value=0.0022 Score=69.41 Aligned_cols=90 Identities=19% Similarity=0.304 Sum_probs=64.0
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCccc-----C---HHHH-hccCCEEEEcCCCCcccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-----S---FDQA-LATADFISLHMPLNPTTS 298 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-----s---l~el-l~~aDvV~l~~Plt~~t~ 298 (628)
+.++.|+|+|++|+.+|+.|+..|.+|++.|.... .+..+..|+..+ + |+++ +.+||+|++++|-.. .
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~--~ 81 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQ--T 81 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHH--H
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChH--H
Confidence 45799999999999999999999999999998752 234455666432 2 3444 688999999998433 3
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aR 320 (628)
++.-......+.+...+|--++
T Consensus 82 n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 82 NLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHhCCCCeEEEEEC
Confidence 3333445566777766665544
No 240
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.50 E-value=0.0044 Score=64.46 Aligned_cols=64 Identities=11% Similarity=0.133 Sum_probs=48.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCC---CEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLG---MNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G---~~V~~-~d~~~~--~~~a~~~g~~--~~sl~ell~--~aDvV~l~~Pl 293 (628)
.++||||+|.||+..++.++..+ +++.+ +|+... ...++..|+. +.+++++++ +.|+|++++|-
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 37999999999999999998664 46554 687642 2334556763 458999997 69999999983
No 241
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.50 E-value=0.0031 Score=61.07 Aligned_cols=70 Identities=20% Similarity=0.311 Sum_probs=56.6
Q ss_pred CcEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeC--CCCCHHHHHHHhcccCcccc
Q 006864 558 GNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVD--EEPNQDSLKEIGKVHFVARI 627 (628)
Q Consensus 558 ~~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD--~~~~~~~l~~L~~l~~v~~v 627 (628)
.+.|-+...|+||++++|+.++.+.|+||..+.++.....+..-|.|.++ +..-+.+.++|.++.+|.+|
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e~~ieqL~kQL~KLidVikV 100 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAYKLVEVVKV 100 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHTTSTTEEEE
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCHHHHHHHHHHhcCcCceEEE
Confidence 47787888999999999999999999999999999777767777766665 34455777888887777664
No 242
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.49 E-value=0.019 Score=60.85 Aligned_cols=128 Identities=20% Similarity=0.144 Sum_probs=85.4
Q ss_pred HHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC--hhHHHHHHHH
Q 006864 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRA 248 (628)
Q Consensus 171 aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG--~IG~~vA~~l 248 (628)
.|..-+|+|.|+-+...-++- +++=++.+.++ .| .+.|++|+++|=| ++..+++..+
T Consensus 143 lA~~s~vPVINa~~~~~HPtQ--aLaDl~Ti~E~------------------~G-~l~glkva~vGD~~nnva~Sl~~~~ 201 (365)
T 4amu_A 143 LVKYSGVPVWNGLTDDEHPTQ--IIADFMTMKEK------------------FG-NLKNKKIVFIGDYKNNVGVSTMIGA 201 (365)
T ss_dssp HHHHHCSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-SCTTCEEEEESSTTSHHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHH------------------hC-CCCCCEEEEECCCCcchHHHHHHHH
Confidence 344568999998654433331 22222322221 12 2789999999988 7899999999
Q ss_pred HcCCCEEEEECCCC--C---hhH-------HHHcCCc--c-cCHHHHhccCCEEEEcC--CCCccc-----------ccc
Q 006864 249 KGLGMNVIAHDPYA--P---ADK-------ARAVGVE--L-VSFDQALATADFISLHM--PLNPTT-----------SKI 300 (628)
Q Consensus 249 ~~~G~~V~~~d~~~--~---~~~-------a~~~g~~--~-~sl~ell~~aDvV~l~~--Plt~~t-----------~~l 300 (628)
..+||+|.+..|.. + .+. +.+.|.. . .++++.++.||+|..-+ ...++. ..-
T Consensus 202 ~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y~ 281 (365)
T 4amu_A 202 AFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNFQ 281 (365)
T ss_dssp HHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTCC
T ss_pred HHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhcccc
Confidence 99999999988743 2 111 2334533 2 38999999999998732 222211 245
Q ss_pred ccHHHHhcCCCCcEEEEcC
Q 006864 301 FNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 301 i~~~~l~~mk~gailIN~a 319 (628)
++.+.++.+|++++|.-|.
T Consensus 282 vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 282 VDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp BCHHHHHHSCTTCEEEECS
T ss_pred cCHHHHHhcCCCcEEECCC
Confidence 7888888899999999885
No 243
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.49 E-value=0.016 Score=60.85 Aligned_cols=129 Identities=19% Similarity=0.161 Sum_probs=87.8
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC--hhHHHHHHHHH
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAK 249 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG--~IG~~vA~~l~ 249 (628)
|...+|+|.|.-+....++- +++=++.+.+++ .|..+.|.+|+++|=| ++..+++..+.
T Consensus 117 A~~~~vPVINa~~~~~HPtQ--~LaDl~Ti~e~~-----------------~g~~l~gl~ia~vGD~~~~va~Sl~~~~~ 177 (333)
T 1duv_G 117 AEYASVPVWNGLTNEFHPTQ--LLADLLTMQEHL-----------------PGKAFNEMTLVYAGDARNNMGNSMLEAAA 177 (333)
T ss_dssp HHHHSSCEEESCCSSCCHHH--HHHHHHHHHHHS-----------------TTCCGGGCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHhCCCCeEcCCCCCCCchH--HHHHHHHHHHHh-----------------cCCCCCCcEEEEECCCccchHHHHHHHHH
Confidence 33447999998765544442 333333333320 1325789999999986 99999999999
Q ss_pred cCCCEEEEECCCC---ChhH-------HHHcCCc---ccCHHHHhccCCEEEEcCCC--Cc------c-----ccccccH
Q 006864 250 GLGMNVIAHDPYA---PADK-------ARAVGVE---LVSFDQALATADFISLHMPL--NP------T-----TSKIFND 303 (628)
Q Consensus 250 ~~G~~V~~~d~~~---~~~~-------a~~~g~~---~~sl~ell~~aDvV~l~~Pl--t~------~-----t~~li~~ 303 (628)
.|||+|.+..|.. +.+. +++.|.. ..++++.++.||+|..-.=. .. + ....++.
T Consensus 178 ~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~ 257 (333)
T 1duv_G 178 LTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNS 257 (333)
T ss_dssp HHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCH
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCH
Confidence 9999999988753 2211 1255643 23899999999999883321 10 0 1256788
Q ss_pred HHHhcC-CCCcEEEEcC
Q 006864 304 ETFAKM-KKGVRIVNVA 319 (628)
Q Consensus 304 ~~l~~m-k~gailIN~a 319 (628)
+.++++ |++++|.-|.
T Consensus 258 ~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 258 KMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp HHHHTTCCTTCEEEECS
T ss_pred HHHHhccCCCcEEECCC
Confidence 999999 9999999985
No 244
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.48 E-value=0.0064 Score=66.47 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=68.2
Q ss_pred eeeecCCeEEEEecC----------hhHHHHHHHHHcCCCEEEEECCCCChhHHHHcC--Cccc-CHHHHhccCCEEEEc
Q 006864 224 GVSLVGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKARAVG--VELV-SFDQALATADFISLH 290 (628)
Q Consensus 224 g~~l~GktiGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g--~~~~-sl~ell~~aDvV~l~ 290 (628)
+..+.|++|+|+|+- .=...+++.|...|.+|.+|||+...+.....+ +.++ ++++.++.||.|+++
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 456899999999984 236889999999999999999998543323333 4444 788999999999999
Q ss_pred CCCCccccccccHHHH-hcCCCCcEEEEcCCC
Q 006864 291 MPLNPTTSKIFNDETF-AKMKKGVRIVNVARG 321 (628)
Q Consensus 291 ~Plt~~t~~li~~~~l-~~mk~gailIN~aRg 321 (628)
++- ++-+. ++-+.+ +.|+ +.+|+|+ |+
T Consensus 393 t~~-~~f~~-~~~~~~~~~~~-~~~i~D~-r~ 420 (450)
T 3gg2_A 393 TEW-KEFRM-PDWSALSQAMA-ASLVIDG-RN 420 (450)
T ss_dssp SCC-GGGSS-CCHHHHHHHSS-SCEEEES-SC
T ss_pred cCC-HHHhh-cCHHHHHHhcC-CCEEEEC-CC
Confidence 873 33333 354444 4465 6689995 44
No 245
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.47 E-value=0.009 Score=62.83 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=66.8
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCC----c-ccCHHHHhc--cCCEEEEcCCCCcccc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGV----E-LVSFDQALA--TADFISLHMPLNPTTS 298 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~----~-~~sl~ell~--~aDvV~l~~Plt~~t~ 298 (628)
.++||||+|.||+.+++.++.. ++++. ++|+.... ..+...|+ . +.+++++++ ++|+|++++|-. ..
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~--~h 84 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS--LH 84 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG--GH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH--HH
Confidence 4799999999999999998875 57765 57876422 23344553 2 348999996 599999999832 22
Q ss_pred ccccHHHHhcCCCCcEEE-Ec-CCCchhcHHHHHHHHhCCCe
Q 006864 299 KIFNDETFAKMKKGVRIV-NV-ARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 299 ~li~~~~l~~mk~gailI-N~-aRg~~vde~aL~~aL~~g~i 338 (628)
-+-....++.|.-++ .- ---.+-+.+.|.++.++..+
T Consensus 85 ---~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~ 123 (362)
T 1ydw_A 85 ---VEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV 123 (362)
T ss_dssp ---HHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred ---HHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 122333466676444 32 12233455677777766543
No 246
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.43 E-value=0.0035 Score=65.51 Aligned_cols=63 Identities=21% Similarity=0.242 Sum_probs=48.6
Q ss_pred CeEEEEecChhHHHHHHHHH-c-CCCEEE-EECCCCCh--hHHHHcC--Cc-ccCHHHHhcc--CCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAK-G-LGMNVI-AHDPYAPA--DKARAVG--VE-LVSFDQALAT--ADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~g--~~-~~sl~ell~~--aDvV~l~~P 292 (628)
.+|||||+|.||+..++.++ . -++++. ++|+.... ..++..| .. +.++++++++ .|+|++++|
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp 75 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSW 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSC
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCC
Confidence 37999999999999999998 5 468876 57886422 2344556 33 3489999986 999999998
No 247
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.43 E-value=0.0012 Score=66.49 Aligned_cols=105 Identities=16% Similarity=0.195 Sum_probs=66.8
Q ss_pred HHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-------------------ChhH-
Q 006864 208 ADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-------------------PADK- 266 (628)
Q Consensus 208 ~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~~~- 266 (628)
+.++++-.+|... .-..|.+++|.|||+|.+|..+|+.|...|. ++..+|+.. +...
T Consensus 12 y~Rq~~l~~~g~~--~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~ 89 (249)
T 1jw9_B 12 YNRQIILRGFDFD--GQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVES 89 (249)
T ss_dssp THHHHTSTTTHHH--HHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHH
T ss_pred hhheecccccCHH--HHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHH
Confidence 3344444446431 1235889999999999999999999999997 899998764 1111
Q ss_pred ----HHHc--CCc--c----c---CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEc
Q 006864 267 ----ARAV--GVE--L----V---SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 267 ----a~~~--g~~--~----~---sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 318 (628)
..+. +++ . . +++++++++|+|+.+++ +.+++.++++...+. +..+|+.
T Consensus 90 ~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 90 ARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp HHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred HHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 0111 111 1 1 24567788888888876 456777776655543 3345554
No 248
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.43 E-value=0.0053 Score=60.97 Aligned_cols=90 Identities=18% Similarity=0.224 Sum_probs=63.7
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHH---HHcCCccc--C-HHHHhccCCEEEEcCCCCccc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKA---RAVGVELV--S-FDQALATADFISLHMPLNPTT 297 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a---~~~g~~~~--s-l~ell~~aDvV~l~~Plt~~t 297 (628)
..++.||++.|||.|.+|...++.|...|.+|.+++|....+.. ...++... . -++.+..+|+|+.++. .++
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~-d~~- 103 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN-DQA- 103 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-CTH-
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-CHH-
Confidence 45899999999999999999999999999999999998754321 22234322 1 2356788999987653 322
Q ss_pred cccccHHHHhcCCCCcEEEEcC
Q 006864 298 SKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 298 ~~li~~~~l~~mk~gailIN~a 319 (628)
+|.......+ -.++||++
T Consensus 104 ---~N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 104 ---VNKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp ---HHHHHHHHSC-TTCEEEC-
T ss_pred ---HHHHHHHHHh-CCCEEEEe
Confidence 3555555566 55778875
No 249
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.42 E-value=0.0031 Score=62.06 Aligned_cols=86 Identities=16% Similarity=0.278 Sum_probs=57.5
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCccc-----C---HHHH-hccCCEEEEcCCCCcccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELV-----S---FDQA-LATADFISLHMPLNPTTS 298 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~-----s---l~el-l~~aDvV~l~~Plt~~t~ 298 (628)
.+++.|+|+|.+|+.+|+.|...|. |+++|+.... +... .++..+ + |+++ +.+||.|++++|-.. .
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~--~ 84 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS--E 84 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH--H
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH--H
Confidence 4689999999999999999999999 9999987532 2222 454322 2 3344 778999999988432 3
Q ss_pred ccccHHHHhcCCCCcEEEEc
Q 006864 299 KIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~ 318 (628)
++.-......+.+...+|--
T Consensus 85 n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 33334445556676444443
No 250
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.41 E-value=0.028 Score=58.34 Aligned_cols=127 Identities=14% Similarity=0.128 Sum_probs=83.3
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec-ChhHHHHHHHHHc
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-GKVGSEVARRAKG 250 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl-G~IG~~vA~~l~~ 250 (628)
|...+|+|+|+-+....++- +++=++.+.++ .| .+.|++|+++|= +++..+.+..+..
T Consensus 118 A~~~~vPVINag~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~glkva~vGD~~~va~Sl~~~~~~ 176 (309)
T 4f2g_A 118 AENSRVPVINGLTNEYHPCQ--VLADIFTYYEH------------------RG-PIRGKTVAWVGDANNMLYTWIQAARI 176 (309)
T ss_dssp HHTCSSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhCCCCEEECCCCccCcHH--HHHHHHHHHHH------------------hC-CCCCCEEEEECCCcchHHHHHHHHHH
Confidence 44467899998765544432 22222322221 12 478999999986 5788888889999
Q ss_pred CCCEEEEECCCC--C-hhH-HHHcCC--c-ccCHHHHhccCCEEEEcC--CCCcc----------ccccccHHHHhcCCC
Q 006864 251 LGMNVIAHDPYA--P-ADK-ARAVGV--E-LVSFDQALATADFISLHM--PLNPT----------TSKIFNDETFAKMKK 311 (628)
Q Consensus 251 ~G~~V~~~d~~~--~-~~~-a~~~g~--~-~~sl~ell~~aDvV~l~~--Plt~~----------t~~li~~~~l~~mk~ 311 (628)
||++|....|.. + .+. +++.|. . ..++++.++.||+|..-. ....+ ....++.+.++++|+
T Consensus 177 ~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~ 256 (309)
T 4f2g_A 177 LDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANS 256 (309)
T ss_dssp HTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCT
T ss_pred cCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCC
Confidence 999999988742 2 221 122332 2 238999999999998743 00010 124578999999999
Q ss_pred CcEEEEcC
Q 006864 312 GVRIVNVA 319 (628)
Q Consensus 312 gailIN~a 319 (628)
+++|.-|.
T Consensus 257 ~ai~mH~l 264 (309)
T 4f2g_A 257 DALFMHCL 264 (309)
T ss_dssp TCEEEECS
T ss_pred CeEEECCC
Confidence 99999985
No 251
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.40 E-value=0.038 Score=58.10 Aligned_cols=128 Identities=20% Similarity=0.269 Sum_probs=84.8
Q ss_pred HHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec-ChhHHHHHHHHH
Q 006864 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-GKVGSEVARRAK 249 (628)
Q Consensus 171 aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl-G~IG~~vA~~l~ 249 (628)
.|...+|+|+|+-+....++ .+++=++.+.++ .| .+.|++|+++|= +++..+.+..+.
T Consensus 142 lA~~~~vPVINag~~~~HPt--QaLaDl~TI~E~------------------~G-~l~glkva~vGD~~nva~Sl~~~~~ 200 (340)
T 4ep1_A 142 LAKESSIPVINGLTDDHHPC--QALADLMTIYEE------------------TN-TFKGIKLAYVGDGNNVCHSLLLASA 200 (340)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHH------------------hC-CCCCCEEEEECCCchhHHHHHHHHH
Confidence 34556799999765443333 122223333331 12 378999999986 578888999999
Q ss_pred cCCCEEEEECCCC--C-hhH-------HHHcCCc--c-cCHHHHhccCCEEEEcCCCCc----c-------ccccccHHH
Q 006864 250 GLGMNVIAHDPYA--P-ADK-------ARAVGVE--L-VSFDQALATADFISLHMPLNP----T-------TSKIFNDET 305 (628)
Q Consensus 250 ~~G~~V~~~d~~~--~-~~~-------a~~~g~~--~-~sl~ell~~aDvV~l~~Plt~----~-------t~~li~~~~ 305 (628)
.||++|.+..|.. + .+. +++.|.. . .+++++++.||+|..-.=... + ....++.+.
T Consensus 201 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~el 280 (340)
T 4ep1_A 201 KVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKEL 280 (340)
T ss_dssp HHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHHH
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHHH
Confidence 9999999988753 2 221 1245633 2 389999999999987442110 0 124578889
Q ss_pred HhcCCCCcEEEEcC
Q 006864 306 FAKMKKGVRIVNVA 319 (628)
Q Consensus 306 l~~mk~gailIN~a 319 (628)
++.+|++++|.-|.
T Consensus 281 l~~ak~dai~MHcL 294 (340)
T 4ep1_A 281 VKHAKQTYHFLHCL 294 (340)
T ss_dssp HTTSCTTCEEEECS
T ss_pred HHhcCCCcEEECCC
Confidence 99999999999986
No 252
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.39 E-value=0.035 Score=57.99 Aligned_cols=127 Identities=17% Similarity=0.099 Sum_probs=84.4
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC-hhHHHHHHHHHc
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG-KVGSEVARRAKG 250 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG-~IG~~vA~~l~~ 250 (628)
|...+|+|+|+-+....++- +++=++.+.+++ | .+.|.+|+++|=| ++..+.+..+..
T Consensus 119 A~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~~va~Sl~~~~~~ 177 (321)
T 1oth_A 119 AKEASIPIINGLSDLYHPIQ--ILADYLTLQEHY------------------S-SLKGLTLSWIGDGNNILHSIMMSAAK 177 (321)
T ss_dssp HHHCSSCEEESCCSSCCHHH--HHHHHHHHHHHH------------------S-CCTTCEEEEESCSSHHHHHHHTTTGG
T ss_pred HHhCCCCEEcCCCCCCCcHH--HHHHHHHHHHHh------------------C-CcCCcEEEEECCchhhHHHHHHHHHH
Confidence 34457999998765544442 333333333321 2 4789999999985 588888888889
Q ss_pred CCCEEEEECCCC---ChhH---H----HHcCC--c-ccCHHHHhccCCEEEEcCCC--Ccc----------ccccccHHH
Q 006864 251 LGMNVIAHDPYA---PADK---A----RAVGV--E-LVSFDQALATADFISLHMPL--NPT----------TSKIFNDET 305 (628)
Q Consensus 251 ~G~~V~~~d~~~---~~~~---a----~~~g~--~-~~sl~ell~~aDvV~l~~Pl--t~~----------t~~li~~~~ 305 (628)
||++|.+..|.. +.+. + ++.|. . ..++++.++.||+|..-+-. ..+ ....++.+.
T Consensus 178 ~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~ 257 (321)
T 1oth_A 178 FGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKT 257 (321)
T ss_dssp GTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHH
T ss_pred cCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHH
Confidence 999999988753 2221 1 13453 3 23899999999999984311 111 114568888
Q ss_pred HhcCCCCcEEEEcC
Q 006864 306 FAKMKKGVRIVNVA 319 (628)
Q Consensus 306 l~~mk~gailIN~a 319 (628)
++++|++++|.-|.
T Consensus 258 l~~a~~dai~mH~l 271 (321)
T 1oth_A 258 AKVAASDWTFLHCL 271 (321)
T ss_dssp HHTSCTTCEEEECS
T ss_pred HhhcCCCCEEECCC
Confidence 88888888888885
No 253
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.38 E-value=0.0047 Score=65.08 Aligned_cols=64 Identities=16% Similarity=0.292 Sum_probs=49.7
Q ss_pred CCeEEEEecChhHHHHHHHHH-c-CCCEEE-EECCCCCh--hHHHHcC--Cc-ccCHHHHhc--cCCEEEEcCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAK-G-LGMNVI-AHDPYAPA--DKARAVG--VE-LVSFDQALA--TADFISLHMP 292 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~g--~~-~~sl~ell~--~aDvV~l~~P 292 (628)
-.+|||||+|.||+..++.++ . -++++. ++|+.... ..++..| +. +.+++++++ +.|+|++++|
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp 96 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITAS 96 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSC
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCC
Confidence 358999999999999999998 5 378876 57887643 2345556 33 348999998 4899999998
No 254
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.37 E-value=0.011 Score=61.37 Aligned_cols=101 Identities=12% Similarity=0.147 Sum_probs=63.1
Q ss_pred CeEEEEecChhHH-HHHHHHHcCCCEEE-EECCCCC--hhHHHHc-CCc-ccCHHHHhc--cCCEEEEcCCCCccccccc
Q 006864 230 KTLAVMGFGKVGS-EVARRAKGLGMNVI-AHDPYAP--ADKARAV-GVE-LVSFDQALA--TADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 230 ktiGIIGlG~IG~-~vA~~l~~~G~~V~-~~d~~~~--~~~a~~~-g~~-~~sl~ell~--~aDvV~l~~Plt~~t~~li 301 (628)
.++||||+|.+|. .++..++.-++++. ++|+... ...++.. ++. +.+++++++ +.|+|++++|-. +.
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~--~h--- 79 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPC--DR--- 79 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGG--GH---
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChh--hH---
Confidence 4899999999996 67777776789965 6787753 2334455 343 348999997 699999999933 22
Q ss_pred cHHHHhcCCCCc-EEEEc-CCCchhcHHHHHHHHhC
Q 006864 302 NDETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDS 335 (628)
Q Consensus 302 ~~~~l~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~ 335 (628)
-+-..+.|+.|. +++.- ---.+-+.+.|.++.++
T Consensus 80 ~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~ 115 (336)
T 2p2s_A 80 AELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAE 115 (336)
T ss_dssp HHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 122233345554 44442 12233344556665544
No 255
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.33 E-value=0.0056 Score=63.82 Aligned_cols=112 Identities=18% Similarity=0.133 Sum_probs=67.5
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCCh--hHHHHcC--C------cc-cCHHHHhccCCEEEEcCCCCc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPA--DKARAVG--V------EL-VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~--~~a~~~g--~------~~-~sl~ell~~aDvV~l~~Plt~ 295 (628)
.++|+|||.|.+|..+|..+...|. +|..||..... ..+.++. . .. .+-.+.++.||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3689999999999999999998887 99999976421 1122211 1 11 123567899999999998533
Q ss_pred ccccc-------cc-------HHHHhcCCCCcEEEEcCCCchhcHHHHHHH--HhCCCeeEE
Q 006864 296 TTSKI-------FN-------DETFAKMKKGVRIVNVARGGVIDEEALVRA--LDSGVVAQA 341 (628)
Q Consensus 296 ~t~~l-------i~-------~~~l~~mk~gailIN~aRg~~vde~aL~~a--L~~g~i~ga 341 (628)
..++ .| .+.+....|++++++++-.-=+....+.+. +...++.|.
T Consensus 87 -k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 87 -KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred -CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEecc
Confidence 2222 01 122333468999999753322334444444 345578776
No 256
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.31 E-value=0.057 Score=56.76 Aligned_cols=130 Identities=15% Similarity=0.186 Sum_probs=83.6
Q ss_pred HHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec-ChhHHHHHHHHH
Q 006864 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-GKVGSEVARRAK 249 (628)
Q Consensus 171 aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl-G~IG~~vA~~l~ 249 (628)
.|...+|+|+|+-+....++ .+++=++.+.++++ .|..+.|++|+++|= +++..+.+..+.
T Consensus 135 lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~~----------------~G~~l~glkva~vGD~~rva~Sl~~~~~ 196 (339)
T 4a8t_A 135 LANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP----------------EGKKLEDCKVVFVGDATQVCFSLGLITT 196 (339)
T ss_dssp HHHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC----------------TTCCGGGCEEEEESSCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEECCCCCcCcH--HHHHHHHHHHHHhh----------------cCCCCCCCEEEEECCCchhHHHHHHHHH
Confidence 34456799999876543333 12222333333210 032588999999986 688899999999
Q ss_pred cCCCEEEEECCCC--Ch-hH-------HHHcCCc--c-cCHHHHhccCCEEEEcC--CCCc--cc----------ccccc
Q 006864 250 GLGMNVIAHDPYA--PA-DK-------ARAVGVE--L-VSFDQALATADFISLHM--PLNP--TT----------SKIFN 302 (628)
Q Consensus 250 ~~G~~V~~~d~~~--~~-~~-------a~~~g~~--~-~sl~ell~~aDvV~l~~--Plt~--~t----------~~li~ 302 (628)
.||++|....|.. +. .. ++..|.. . .+++ .++.||+|..-+ ...+ +. ...++
T Consensus 197 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~vt 275 (339)
T 4a8t_A 197 KMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVN 275 (339)
T ss_dssp HTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCBC
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccccC
Confidence 9999999988753 22 11 2334533 2 3788 999999998732 1111 10 14567
Q ss_pred HHHHhcCCCCcEEEEcC
Q 006864 303 DETFAKMKKGVRIVNVA 319 (628)
Q Consensus 303 ~~~l~~mk~gailIN~a 319 (628)
.+.++++|++++|.-|.
T Consensus 276 ~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 276 QEMMDRAGANCKFMHCL 292 (339)
T ss_dssp HHHHHHHCTTCEEEECS
T ss_pred HHHHHhcCCCcEEECCC
Confidence 88888888888888885
No 257
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.31 E-value=0.017 Score=66.96 Aligned_cols=130 Identities=19% Similarity=0.262 Sum_probs=88.8
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHH---------------cCC-------cccCHHHHhccCCE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA---------------VGV-------ELVSFDQALATADF 286 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~---------------~g~-------~~~sl~ell~~aDv 286 (628)
+++||||.|.||+.+|..+...|++|+.+|+.... +.+.. ... ...+-.+.+++||+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDl 396 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 396 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSE
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCE
Confidence 79999999999999999999999999999986421 11100 000 11222345789999
Q ss_pred EEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCC-CeeEEEeeccCCCCCCCCCccccCCcEEE
Q 006864 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG-VVAQAALDVFTEEPPAKDSKLVQHENVTV 365 (628)
Q Consensus 287 V~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g-~i~ga~lDV~~~EP~~~~~~L~~~~nvil 365 (628)
|+=++|-+-+.+.-+-++.=+.++++++|-...++ +.-..|.++++.. ++ +++..|.+-| --||.+ ||-
T Consensus 397 VIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~~p~r~--ig~HFfnP~~---~m~LVE---vi~ 466 (742)
T 3zwc_A 397 VVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDRPQLV--IGTHFFSPAH---VMRLLE---VIP 466 (742)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSCGGGE--EEEECCSSTT---TCCEEE---EEE
T ss_pred EEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcCCcccc--ccccccCCCC---CCceEE---Eec
Confidence 99999988877776666666679999998876555 4444566666432 44 6677665332 235555 676
Q ss_pred cCCC
Q 006864 366 TPHL 369 (628)
Q Consensus 366 TPHi 369 (628)
+++.
T Consensus 467 g~~T 470 (742)
T 3zwc_A 467 SRYS 470 (742)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 6653
No 258
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.27 E-value=0.0063 Score=66.26 Aligned_cols=109 Identities=21% Similarity=0.170 Sum_probs=77.8
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCC---EEEEEC----CC--CChh-H---HH----H----cCC--cccCHHHH
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM---NVIAHD----PY--APAD-K---AR----A----VGV--ELVSFDQA 280 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~---~V~~~d----~~--~~~~-~---a~----~----~g~--~~~sl~el 280 (628)
|..+.++++.|+|.|..|+.+++.|...|. +|+.+| +. .... . .. . .+. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 456788999999999999999999999998 799999 65 2111 1 10 1 111 13468899
Q ss_pred hccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCC
Q 006864 281 LATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGV 337 (628)
Q Consensus 281 l~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~ 337 (628)
++++|+++.+.|..+ +++.++.++.|+++.++++++... .+.-+.+|.+.|.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 999999999998532 566667788899999999995433 3333444444453
No 259
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.25 E-value=0.0078 Score=65.77 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=74.2
Q ss_pred cCCeEEEEecChh--HHHHHHHHHc----CCCEEEEECCCCCh-hHHHHc---------CCcc-cCHHHHhccCCEEEEc
Q 006864 228 VGKTLAVMGFGKV--GSEVARRAKG----LGMNVIAHDPYAPA-DKARAV---------GVEL-VSFDQALATADFISLH 290 (628)
Q Consensus 228 ~GktiGIIGlG~I--G~~vA~~l~~----~G~~V~~~d~~~~~-~~a~~~---------g~~~-~sl~ell~~aDvV~l~ 290 (628)
..++|+|||.|.+ |..++..+.. .| +|..||..... +..... .+.. .+++++++.||||+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4569999999998 5788877653 46 99999986421 111111 1222 3799999999999999
Q ss_pred CCCC-----------ccccccccH------------------------HHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 291 MPLN-----------PTTSKIFND------------------------ETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 291 ~Plt-----------~~t~~li~~------------------------~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
++.. |.-.++... ..+....|++++||.+..-=+-..++.+.+..
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~~p~ 162 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPG 162 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTT
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHHCCC
Confidence 9642 223333211 23444568999999987666666676665555
Q ss_pred CCeeE
Q 006864 336 GVVAQ 340 (628)
Q Consensus 336 g~i~g 340 (628)
.++.|
T Consensus 163 ~rviG 167 (450)
T 3fef_A 163 IKAIG 167 (450)
T ss_dssp CEEEE
T ss_pred CCEEE
Confidence 56666
No 260
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.25 E-value=0.0046 Score=67.05 Aligned_cols=64 Identities=20% Similarity=0.240 Sum_probs=48.2
Q ss_pred CeEEEEecChhHH-HHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCc------ccCHHHHhc--cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGS-EVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVE------LVSFDQALA--TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~-~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~------~~sl~ell~--~aDvV~l~~Pl 293 (628)
.+|||||+|.||+ .+++.++.. ++++. ++|+.... ..++..|+. +.+++++++ +.|+|++++|-
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~ 160 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPN 160 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCc
Confidence 4899999999997 899988865 57764 67876422 223445653 348999997 79999999983
No 261
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.25 E-value=0.045 Score=57.29 Aligned_cols=134 Identities=15% Similarity=0.124 Sum_probs=85.5
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC--hhHHHHHHHHH
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAK 249 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG--~IG~~vA~~l~ 249 (628)
|...+|+|+|+-.....++ .+++=++.+.+++. |.. .....+.|++|+++|=| ++..+.+..+.
T Consensus 118 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~g----------~~~--~~~~~l~gl~va~vGD~~~~va~Sl~~~~~ 183 (328)
T 3grf_A 118 AQHASVPCINALDDFGHPL--QMVCDFMTIKEKFT----------AAG--EFSNGFKGIKFAYCGDSMNNVTYDLMRGCA 183 (328)
T ss_dssp HHHCSSCEEESSCSSCCHH--HHHHHHHHHHHHHH----------HTT--CCTTTGGGCCEEEESCCSSHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhC----------Ccc--ccccccCCcEEEEeCCCCcchHHHHHHHHH
Confidence 4445789999876554333 22333333333221 100 01124889999999986 88999999999
Q ss_pred cCCCEEEEECCCC----Ch-h---HHH----H--cCCc--c-cCHHHHhccCCEEEEc----CCCCcc---------ccc
Q 006864 250 GLGMNVIAHDPYA----PA-D---KAR----A--VGVE--L-VSFDQALATADFISLH----MPLNPT---------TSK 299 (628)
Q Consensus 250 ~~G~~V~~~d~~~----~~-~---~a~----~--~g~~--~-~sl~ell~~aDvV~l~----~Plt~~---------t~~ 299 (628)
.||++|.+..|.. +. + .++ + .|.. . .++++.++.||+|..- +-..++ ...
T Consensus 184 ~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y 263 (328)
T 3grf_A 184 LLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPF 263 (328)
T ss_dssp HHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGG
T ss_pred HcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCC
Confidence 9999999988743 11 1 112 2 3532 2 3899999999999863 221111 124
Q ss_pred cccHHHHhcCCCCcEEEEcC
Q 006864 300 IFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~a 319 (628)
.++.+.++++|++++|.-|.
T Consensus 264 ~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 264 QVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp CBCHHHHTTSCTTCEEEECS
T ss_pred CCCHHHHHhcCCCCEEECCC
Confidence 57889999999999999985
No 262
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.22 E-value=0.0074 Score=60.65 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=54.9
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEE-ECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCccccccccHHHHh
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~ 307 (628)
.+|+|+|+|+||+.+++.+...+.++.+ +|+.... ..|+... ++++++ ++|+|+-..+ |+.. .+.+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----~~gv~v~~dl~~l~-~~DVvIDft~--p~a~----~~~~~ 72 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----TTPYQQYQHIADVK-GADVAIDFSN--PNLL----FPLLD 72 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------CCSCBCSCTTTCT-TCSEEEECSC--HHHH----HHHHT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----cCCCceeCCHHHHh-CCCEEEEeCC--hHHH----HHHHH
Confidence 5899999999999999999877657665 7876532 3566544 788888 9999874442 2211 12333
Q ss_pred cCCCCcEEEEcCCC
Q 006864 308 KMKKGVRIVNVARG 321 (628)
Q Consensus 308 ~mk~gailIN~aRg 321 (628)
++.|.-+|....|
T Consensus 73 -l~~g~~vVigTTG 85 (243)
T 3qy9_A 73 -EDFHLPLVVATTG 85 (243)
T ss_dssp -SCCCCCEEECCCS
T ss_pred -HhcCCceEeCCCC
Confidence 7778777765554
No 263
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.22 E-value=0.0056 Score=64.65 Aligned_cols=88 Identities=20% Similarity=0.262 Sum_probs=64.1
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC-hhHHH-HcCCccc----C---HHHHhccCCEEEEcCCCCcccc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKAR-AVGVELV----S---FDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~-~~g~~~~----s---l~ell~~aDvV~l~~Plt~~t~ 298 (628)
.|+++.|+|.|.||..+++.++.+|++|++.++... .+.+. ++|...+ + +.++....|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 588999999999999999999999999999987653 23334 6675422 2 33344567888888764321
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aR 320 (628)
-...++.|+++..+++++.
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCC
T ss_pred ---HHHHHHHHhcCCEEEEEcc
Confidence 2456777888888888874
No 264
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.21 E-value=0.017 Score=59.99 Aligned_cols=94 Identities=15% Similarity=0.218 Sum_probs=68.8
Q ss_pred eecCCeEEEEec---ChhHHHHHHHHHcCCCEEEEECCCC--Chh----HHHHcCCcc---cCHHHHhccCCEEEEcCCC
Q 006864 226 SLVGKTLAVMGF---GKVGSEVARRAKGLGMNVIAHDPYA--PAD----KARAVGVEL---VSFDQALATADFISLHMPL 293 (628)
Q Consensus 226 ~l~GktiGIIGl---G~IG~~vA~~l~~~G~~V~~~d~~~--~~~----~a~~~g~~~---~sl~ell~~aDvV~l~~Pl 293 (628)
.+.|++|+++|= |++..+++..+..||++|....|.. +.. .+++.|... .+++++++.||+|..-.=-
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 478999999998 4899999999999999999988753 221 233446542 3799999999999885421
Q ss_pred Cc------c-----ccccccHHHHhcCCCCcEEEEcC
Q 006864 294 NP------T-----TSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 294 t~------~-----t~~li~~~~l~~mk~gailIN~a 319 (628)
.+ + ....++.+.++++|++++|.-|.
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 11 0 02456777888888888888875
No 265
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.19 E-value=0.019 Score=60.05 Aligned_cols=112 Identities=14% Similarity=0.182 Sum_probs=69.2
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhH--HHHc---------CCcc--cCHHHHhccCCEEEEcCCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADK--ARAV---------GVEL--VSFDQALATADFISLHMPL 293 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~--a~~~---------g~~~--~sl~ell~~aDvV~l~~Pl 293 (628)
..++|+|||.|.+|..+|..+...|+ +|..+|....... +.++ .... .+-.+.++.||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 45799999999999999999987776 9999998754321 1111 1111 2335789999999999763
Q ss_pred Ccccccc-----c--cH-------HHHhcCCCCcEEEEcCCCchhcHH--HHHHH--HhCCCeeEEE
Q 006864 294 NPTTSKI-----F--ND-------ETFAKMKKGVRIVNVARGGVIDEE--ALVRA--LDSGVVAQAA 342 (628)
Q Consensus 294 t~~t~~l-----i--~~-------~~l~~mk~gailIN~aRg~~vde~--aL~~a--L~~g~i~ga~ 342 (628)
. ...++ + |. +.+....|++++++++ ..+|.- .+.+. +...++.|.+
T Consensus 84 p-~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 84 P-RKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp C-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred C-CCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHHHHHHHHhcCCCHHHEEeec
Confidence 2 22222 1 11 1233345889999995 444443 33333 2224566654
No 266
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.19 E-value=0.0051 Score=63.84 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=57.2
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHH--HHc---------C--Ccc-cCHHHHhccCCEEEEcCCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKA--RAV---------G--VEL-VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a--~~~---------g--~~~-~sl~ell~~aDvV~l~~Plt 294 (628)
++|+|||.|.+|..+|..+...|+ +|..+|........ .++ . +.. .++ +.++.||+|+++++..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 589999999999999999998886 99999976532111 111 1 112 356 6789999999998643
Q ss_pred cccccc-------cc----H---HHHhcCCCCcEEEEcCC
Q 006864 295 PTTSKI-------FN----D---ETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 295 ~~t~~l-------i~----~---~~l~~mk~gailIN~aR 320 (628)
. ..++ .| + +.+....|++++++++-
T Consensus 82 ~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 82 R-KPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp --------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 2 2221 01 1 12333458889998743
No 267
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.18 E-value=0.012 Score=60.61 Aligned_cols=112 Identities=16% Similarity=0.142 Sum_probs=67.0
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhH--HH--HcCC------c--ccCHHHHhccCCEEEEcCCCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--AR--AVGV------E--LVSFDQALATADFISLHMPLN 294 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~--~~g~------~--~~sl~ell~~aDvV~l~~Plt 294 (628)
.++|+|||.|.+|..+|..|...|+ +|..+|+...... +. ..+. . ..+-.+.++.||+|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~ 86 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 86 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence 3689999999999999999998898 9999998742111 11 1121 1 111235678999999999633
Q ss_pred cccccc------------cc--HHHHhcCCCCcEEEEcCCCchhcHHHHHH--HHhCCCeeEE
Q 006864 295 PTTSKI------------FN--DETFAKMKKGVRIVNVARGGVIDEEALVR--ALDSGVVAQA 341 (628)
Q Consensus 295 ~~t~~l------------i~--~~~l~~mk~gailIN~aRg~~vde~aL~~--aL~~g~i~ga 341 (628)
. ..+. +. ...+....++++++++.-|--+.+....+ .+...++.|.
T Consensus 87 ~-~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~ 148 (319)
T 1lld_A 87 Q-KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIFGS 148 (319)
T ss_dssp C-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEEC
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHHHHHHhcCCCHHHEeec
Confidence 2 1211 00 11222346889999987554333322221 2334456553
No 268
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.18 E-value=0.089 Score=54.56 Aligned_cols=127 Identities=14% Similarity=0.074 Sum_probs=84.4
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeec-CCeEEEEec-ChhHHHHHHHHH
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLV-GKTLAVMGF-GKVGSEVARRAK 249 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~-GktiGIIGl-G~IG~~vA~~l~ 249 (628)
|...+|+|+|+-+....++- +++=++.+.++ .| .+. |++|+++|= +++..+.+..+.
T Consensus 109 A~~~~vPVINag~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~~gl~va~vGD~~~va~Sl~~~~~ 167 (307)
T 3tpf_A 109 ARYSKAPVINALSELYHPTQ--VLGDLFTIKEW------------------NK-MQNGIAKVAFIGDSNNMCNSWLITAA 167 (307)
T ss_dssp HHHCSSCEEEEECSSCCHHH--HHHHHHHHHHT------------------TC-CGGGCCEEEEESCSSHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCcCcHH--HHHHHHHHHHH------------------hC-CCCCCCEEEEEcCCCccHHHHHHHHH
Confidence 44567899998665443331 22223333321 12 467 999999996 578888888999
Q ss_pred cCCCEEEEECCCC--C-hhH---HH----HcCCc--c-cCHHHHhccCCEEEEcC--CCCcc----------ccccccHH
Q 006864 250 GLGMNVIAHDPYA--P-ADK---AR----AVGVE--L-VSFDQALATADFISLHM--PLNPT----------TSKIFNDE 304 (628)
Q Consensus 250 ~~G~~V~~~d~~~--~-~~~---a~----~~g~~--~-~sl~ell~~aDvV~l~~--Plt~~----------t~~li~~~ 304 (628)
.||++|....|.. + .+. ++ ..|.. . .++++.++.||+|..-. ....+ ....++.+
T Consensus 168 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e 247 (307)
T 3tpf_A 168 ILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEK 247 (307)
T ss_dssp HHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHH
T ss_pred HcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHH
Confidence 9999999988753 2 221 11 34543 2 38999999999998754 11111 12457888
Q ss_pred HHhcCCCCcEEEEcC
Q 006864 305 TFAKMKKGVRIVNVA 319 (628)
Q Consensus 305 ~l~~mk~gailIN~a 319 (628)
.++++|++++|.-|.
T Consensus 248 ~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 248 AMSVANKDAILLHCL 262 (307)
T ss_dssp HHHHSCTTCEEEECS
T ss_pred HHHhcCCCcEEECCC
Confidence 999999999999986
No 269
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.16 E-value=0.016 Score=63.39 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=67.9
Q ss_pred eecCCeEEEEecCh----------hHHHHHHHHHcCCCEEEEECCCCChhHHHH-c-------------CCccc-CHHHH
Q 006864 226 SLVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARA-V-------------GVELV-SFDQA 280 (628)
Q Consensus 226 ~l~GktiGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~-~-------------g~~~~-sl~el 280 (628)
.+.|++|+|+|+.- -...+++.|...|.+|.+|||+...+.... . ++.+. +..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 48999999999874 678899999999999999999975543211 1 23333 67889
Q ss_pred hccCCEEEEcCCCCccccccccHHHH-hcCCCCcEEEEcCCC
Q 006864 281 LATADFISLHMPLNPTTSKIFNDETF-AKMKKGVRIVNVARG 321 (628)
Q Consensus 281 l~~aDvV~l~~Plt~~t~~li~~~~l-~~mk~gailIN~aRg 321 (628)
++.||+|++++.- ++-+. ++-+.+ ..|+...+|+|+ |+
T Consensus 406 ~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~ 444 (467)
T 2q3e_A 406 CDGAHAVVICTEW-DMFKE-LDYERIHKKMLKPAFIFDG-RR 444 (467)
T ss_dssp HTTCSEEEECSCC-GGGGG-SCHHHHHHHSCSSCEEEES-SC
T ss_pred HhCCcEEEEecCC-hhhhc-CCHHHHHHhcCCCCEEEeC-CC
Confidence 9999999999874 33333 354444 567776668886 44
No 270
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.15 E-value=0.0077 Score=63.11 Aligned_cols=91 Identities=16% Similarity=0.109 Sum_probs=60.3
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhHH----HHcC-------Ccc-cCHHHHhccCCEEEEcCCCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADKA----RAVG-------VEL-VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a----~~~g-------~~~-~sl~ell~~aDvV~l~~Plt 294 (628)
.++|+|||.|.||..+|..|...|+ +|..+|........ ...+ +.. .+..+.++.||+|+++.+..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGAN 84 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccC
Confidence 5789999999999999999987776 99999986321111 1111 111 12346889999999998642
Q ss_pred cccccc-----c--cH-------HHHhcCCCCcEEEEcCC
Q 006864 295 PTTSKI-----F--ND-------ETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 295 ~~t~~l-----i--~~-------~~l~~mk~gailIN~aR 320 (628)
...++ + |. +.+....|++++++++-
T Consensus 85 -~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 85 -QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp -CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 22222 1 21 22334568899999974
No 271
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.14 E-value=0.0056 Score=67.26 Aligned_cols=93 Identities=17% Similarity=0.230 Sum_probs=58.3
Q ss_pred cceeeecCCeEEEEecChhHHHHHHHHHcC-CCEEEEECCCCChhH--HHHcCCcc-----c---CHHHHhccCCEEEEc
Q 006864 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGL-GMNVIAHDPYAPADK--ARAVGVEL-----V---SFDQALATADFISLH 290 (628)
Q Consensus 222 ~~g~~l~GktiGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~~~~~--a~~~g~~~-----~---sl~ell~~aDvV~l~ 290 (628)
+.+..+.+++++|+|.|.+|+.+++.|... |.+|.++|+...... +...++.. . ++.++++.+|+|+.+
T Consensus 16 ~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred ccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 456788999999999999999999999987 789999998742211 11123321 1 356778899999999
Q ss_pred CCCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 291 MPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 291 ~Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
+|.... .-+.. +.+++|..+++++
T Consensus 96 tp~~~~--~~v~~---a~l~~g~~vvd~~ 119 (467)
T 2axq_A 96 IPYTFH--PNVVK---SAIRTKTDVVTSS 119 (467)
T ss_dssp SCGGGH--HHHHH---HHHHHTCEEEECS
T ss_pred Cchhhh--HHHHH---HHHhcCCEEEEee
Confidence 995421 11111 2245566777764
No 272
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.10 E-value=0.071 Score=56.32 Aligned_cols=129 Identities=16% Similarity=0.190 Sum_probs=81.9
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec-ChhHHHHHHHHHc
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-GKVGSEVARRAKG 250 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl-G~IG~~vA~~l~~ 250 (628)
|...+|+|+|+-+....++ .+++=++.+.++++ .|..+.|++|+++|= +++..+.+..+..
T Consensus 114 A~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~~----------------~G~~l~glkva~vGD~~rva~Sl~~~~~~ 175 (355)
T 4a8p_A 114 ANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP----------------EGKKLEDCKVVFVGDATQVCFSLGLITTK 175 (355)
T ss_dssp HHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC----------------TTCCGGGCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhh----------------cCCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence 4456799999866443333 12222333333210 032578999999986 6888999999999
Q ss_pred CCCEEEEECCCC--Ch-hH-------HHHcCCc--c-cCHHHHhccCCEEEEcC--CCCc--cc----------cccccH
Q 006864 251 LGMNVIAHDPYA--PA-DK-------ARAVGVE--L-VSFDQALATADFISLHM--PLNP--TT----------SKIFND 303 (628)
Q Consensus 251 ~G~~V~~~d~~~--~~-~~-------a~~~g~~--~-~sl~ell~~aDvV~l~~--Plt~--~t----------~~li~~ 303 (628)
||++|.+..|.. +. .. +...|.. . .+++ .++.||+|..-+ ...+ +. ...++.
T Consensus 176 ~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~vt~ 254 (355)
T 4a8p_A 176 MGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQ 254 (355)
T ss_dssp TTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCBCH
T ss_pred cCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhccccccCH
Confidence 999999988753 22 11 2334543 2 3788 999999998632 1111 00 144677
Q ss_pred HHHhcCCCCcEEEEcC
Q 006864 304 ETFAKMKKGVRIVNVA 319 (628)
Q Consensus 304 ~~l~~mk~gailIN~a 319 (628)
+.++++|++++|.-|.
T Consensus 255 ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 255 EMMDRAGANCKFMHCL 270 (355)
T ss_dssp HHHHHHCTTCEEEECS
T ss_pred HHHHhcCCCcEEECCC
Confidence 7777788888888775
No 273
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.10 E-value=0.043 Score=58.03 Aligned_cols=127 Identities=22% Similarity=0.268 Sum_probs=86.4
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC--hhHHHHHHHHH
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAK 249 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG--~IG~~vA~~l~ 249 (628)
|...+|+|+|+-+....++- +++=++.+.++ .| .+.|.+|+++|=| ++..+++..+.
T Consensus 140 A~~s~vPVINa~~~~~HPtQ--aLaDl~Ti~E~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~~ 198 (359)
T 2w37_A 140 ARDSGVPVWNGLTDEWHPTQ--MLADFMTVKEN------------------FG-KLQGLTLTFMGDGRNNVANSLLVTGA 198 (359)
T ss_dssp HHHSSSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCccH--HHHHHHHHHHH------------------hC-CcCCeEEEEECCCccchHHHHHHHHH
Confidence 44557999997665444432 33333333331 12 4789999999996 99999999999
Q ss_pred cCCCEEEEECCCC---ChhH-------HHHcCCc--c-cCHHHHhccCCEEEEcCCC--Ccc---------ccccccHHH
Q 006864 250 GLGMNVIAHDPYA---PADK-------ARAVGVE--L-VSFDQALATADFISLHMPL--NPT---------TSKIFNDET 305 (628)
Q Consensus 250 ~~G~~V~~~d~~~---~~~~-------a~~~g~~--~-~sl~ell~~aDvV~l~~Pl--t~~---------t~~li~~~~ 305 (628)
.||++|.+..|.. +.+. +++.|.. . .++++.++.||+|..-.=. ..+ ....++.+.
T Consensus 199 ~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~el 278 (359)
T 2w37_A 199 ILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEA 278 (359)
T ss_dssp HHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHH
T ss_pred HcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHH
Confidence 9999999988753 2211 1245633 2 3899999999999884321 110 135568888
Q ss_pred HhcCC---CCcEEEEcC
Q 006864 306 FAKMK---KGVRIVNVA 319 (628)
Q Consensus 306 l~~mk---~gailIN~a 319 (628)
++++| ++++|.-|.
T Consensus 279 l~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 279 MKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp HHTTCCCGGGCEEEECS
T ss_pred HHhhCCCCCCEEEECCC
Confidence 88888 899998885
No 274
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.03 E-value=0.006 Score=64.33 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=46.6
Q ss_pred CeEEEEecChhHHH-HHHHHHcC-CCEEE-EECCCCCh--hHHHHcC-Cc-ccCHHHHhccC--CEEEEcCC
Q 006864 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAPA--DKARAVG-VE-LVSFDQALATA--DFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g-~~-~~sl~ell~~a--DvV~l~~P 292 (628)
.+|||||+|.||+. .++.++.. +.++. ++|+.... ..+...+ .. +.++++++++. |+|++++|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC
Confidence 48999999999995 88988876 68876 67886422 1222332 33 34899999865 99999998
No 275
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.02 E-value=0.011 Score=61.57 Aligned_cols=95 Identities=19% Similarity=0.211 Sum_probs=61.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhHH--HH-------c--CCcc--cCHHHHhccCCEEEEcCCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADKA--RA-------V--GVEL--VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a--~~-------~--g~~~--~sl~ell~~aDvV~l~~Plt 294 (628)
++|+|||.|.||+.+|..+...|+ +|..+|........ .+ . .... .+..+.++.||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 479999999999999999987776 99999987533211 01 1 1222 24678899999999998743
Q ss_pred cccccc-----c--cH-------HHHhcCCCCcEEEEcCCCchhcHH
Q 006864 295 PTTSKI-----F--ND-------ETFAKMKKGVRIVNVARGGVIDEE 327 (628)
Q Consensus 295 ~~t~~l-----i--~~-------~~l~~mk~gailIN~aRg~~vde~ 327 (628)
. ..++ + |. +.+....|.+++++++ ..+|.-
T Consensus 81 ~-kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 124 (314)
T 3nep_X 81 R-SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA--NPLDVM 124 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC--SSHHHH
T ss_pred C-CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC--CchhHH
Confidence 2 2222 1 11 2334457889999987 344443
No 276
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.02 E-value=0.0073 Score=63.02 Aligned_cols=62 Identities=19% Similarity=0.311 Sum_probs=47.2
Q ss_pred eEEEEecChhHHH-HHHHHHcC-CCEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEcCC
Q 006864 231 TLAVMGFGKVGSE-VARRAKGL-GMNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMP 292 (628)
Q Consensus 231 tiGIIGlG~IG~~-vA~~l~~~-G~~V~~-~d~~~~--~~~a~~~g~~--~~sl~ell~--~aDvV~l~~P 292 (628)
++||||+|.||+. .+..++.. +++|.+ +|+... ...+++.|+. +.+++++++ +.|+|++++|
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP 95 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLP 95 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSC
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCC
Confidence 8999999999986 56677665 678775 687642 2345667774 358999996 4799999999
No 277
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.00 E-value=0.0063 Score=63.49 Aligned_cols=111 Identities=15% Similarity=0.045 Sum_probs=66.7
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhH--HHHc--------CCcc-cCHHHHhccCCEEEEcCCCCcc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--ARAV--------GVEL-VSFDQALATADFISLHMPLNPT 296 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~--------g~~~-~sl~ell~~aDvV~l~~Plt~~ 296 (628)
++|+|||.|.+|.+++..+...++ ++..||....... +.++ .+.. .+..+.++.||+|+++.+....
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~~ 85 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQK 85 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 689999999999999999986665 8999998532111 1111 1111 1456779999999999875432
Q ss_pred cccc-------ccH-------HHHhcCCCCcEEEEcCCCchhcHHHHHHH--HhCCCeeEE
Q 006864 297 TSKI-------FND-------ETFAKMKKGVRIVNVARGGVIDEEALVRA--LDSGVVAQA 341 (628)
Q Consensus 297 t~~l-------i~~-------~~l~~mk~gailIN~aRg~~vde~aL~~a--L~~g~i~ga 341 (628)
.++ .|. +.+....|++++++++-.-=+....+.+. +...++.|.
T Consensus 86 -~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 86 -PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEec
Confidence 221 111 22333478999999843322333344443 333466665
No 278
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.97 E-value=0.085 Score=57.31 Aligned_cols=107 Identities=21% Similarity=0.294 Sum_probs=71.7
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEE-EC-------CCC-ChhHH----HHcC-------CcccCHHHHhc-
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA-HD-------PYA-PADKA----RAVG-------VELVSFDQALA- 282 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~-~d-------~~~-~~~~a----~~~g-------~~~~sl~ell~- 282 (628)
|.++.|+++.|.|+|++|+.+|+.|...|++|++ .| |.- +.+.. .+.| .+.++.++++.
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 4579999999999999999999999999999984 34 321 22211 1112 23446677765
Q ss_pred cCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 283 TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 283 ~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
.||+++-|.. .+.++.+....++ ..+|+-.|-+.+- .++- +.|.+..|
T Consensus 310 ~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~eA~-~iL~~~GI 357 (440)
T 3aog_A 310 PVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PAAD-DILLEKGV 357 (440)
T ss_dssp CCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHHH-HHHHHHTC
T ss_pred CCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HHHH-HHHHHCCC
Confidence 7999998875 4556666666663 5577777877764 4443 44444333
No 279
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.94 E-value=0.032 Score=58.00 Aligned_cols=94 Identities=14% Similarity=0.221 Sum_probs=68.4
Q ss_pred eecCCeEEEEec---ChhHHHHHHHHHcC-CCEEEEECCCC--C-h---hHHHHcCCcc---cCHHHHhccCCEEEEcCC
Q 006864 226 SLVGKTLAVMGF---GKVGSEVARRAKGL-GMNVIAHDPYA--P-A---DKARAVGVEL---VSFDQALATADFISLHMP 292 (628)
Q Consensus 226 ~l~GktiGIIGl---G~IG~~vA~~l~~~-G~~V~~~d~~~--~-~---~~a~~~g~~~---~sl~ell~~aDvV~l~~P 292 (628)
.+.|++|+++|= |++..+++..+..| |++|.+..|.. + . +.+++.|... .+++++++.||+|..-.=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 478999999998 59999999999999 99999988753 2 2 1233446542 379999999999987542
Q ss_pred CCc----cc------cccccHHHHhcCCCCcEEEEcC
Q 006864 293 LNP----TT------SKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 293 lt~----~t------~~li~~~~l~~mk~gailIN~a 319 (628)
-.+ +. ...++.+.++++|++++|.-|.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 111 10 2456788888888888888885
No 280
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.94 E-value=0.024 Score=57.78 Aligned_cols=66 Identities=17% Similarity=0.154 Sum_probs=49.2
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCCh--hHHHHcCCccc-CHHHHhccCCEEEEcCCCCc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVGVELV-SFDQALATADFISLHMPLNP 295 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~ 295 (628)
.++++.|||.|.+|+.++..|...|. +|.+++|.... ..+...+.... ++. +.++|+|+.++|..-
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm 187 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGM 187 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCc
Confidence 47899999999999999999999997 79999987422 22333343322 222 468999999999653
No 281
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.93 E-value=0.0077 Score=63.04 Aligned_cols=112 Identities=15% Similarity=0.057 Sum_probs=66.7
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhH--HHHc--C------Ccc-cCHHHHhccCCEEEEcCCCCc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--ARAV--G------VEL-VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~--g------~~~-~sl~ell~~aDvV~l~~Plt~ 295 (628)
.++|+|||.|.+|..++..+...++ ++..||....... +.++ . +.. .+..+.++.||+|+++.+...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~ 88 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3699999999999999999986665 8999998532111 1111 1 111 145677999999999987543
Q ss_pred ccccc-------ccH-------HHHhcCCCCcEEEEcCCCchhcHHHHHHH--HhCCCeeEE
Q 006864 296 TTSKI-------FND-------ETFAKMKKGVRIVNVARGGVIDEEALVRA--LDSGVVAQA 341 (628)
Q Consensus 296 ~t~~l-------i~~-------~~l~~mk~gailIN~aRg~~vde~aL~~a--L~~g~i~ga 341 (628)
..++ .|. +.+....|++++++++-.-=+....+.+. +...++.|.
T Consensus 89 -k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 89 -KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEc
Confidence 2222 111 12233468999999843322333343343 333466665
No 282
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.92 E-value=0.019 Score=62.40 Aligned_cols=84 Identities=20% Similarity=0.272 Sum_probs=64.2
Q ss_pred eecCCeEEEEecC----------hhHHHHHHHHHcC-CCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCC
Q 006864 226 SLVGKTLAVMGFG----------KVGSEVARRAKGL-GMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLN 294 (628)
Q Consensus 226 ~l~GktiGIIGlG----------~IG~~vA~~l~~~-G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt 294 (628)
.+.|++|+|+|+- .-...+++.|... |.+|.+|||+.... ....++++.++.||.|+++++-
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~------~~~~~~~~~~~~ad~vvi~t~~- 384 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD------FVEHDMSHAVKDASLVLILSDH- 384 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT------TBCSTTHHHHTTCSEEEECSCC-
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc------cccCCHHHHHhCCCEEEEecCC-
Confidence 4789999999984 2368899999999 99999999997542 2334789999999999999873
Q ss_pred ccccccccHHHHhcCCCCcEEEEc
Q 006864 295 PTTSKIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~gailIN~ 318 (628)
++-+. ++-+.+..|+ +.+|+|+
T Consensus 385 ~~f~~-~d~~~~~~~~-~~~i~D~ 406 (431)
T 3ojo_A 385 SEFKN-LSDSHFDKMK-HKVIFDT 406 (431)
T ss_dssp GGGTS-CCGGGGTTCS-SCEEEES
T ss_pred HHHhc-cCHHHHHhCC-CCEEEEC
Confidence 33333 3445556676 6789996
No 283
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.91 E-value=0.016 Score=60.46 Aligned_cols=93 Identities=19% Similarity=0.211 Sum_probs=60.6
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC--ChhHHH--H---------cC--CcccCHHHHhccCCEEEEcC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA--PADKAR--A---------VG--VELVSFDQALATADFISLHM 291 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~--~~~~a~--~---------~g--~~~~sl~ell~~aDvV~l~~ 291 (628)
..++|+|||.|.+|..+|..+...|+ +|..||... ...... + .. +...+-.+.+++||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46799999999999999999998898 999999872 111110 0 01 11122256789999999997
Q ss_pred CCC--c-ccc-ccc--cH-------HHHhcCCCCcEEEEcCC
Q 006864 292 PLN--P-TTS-KIF--ND-------ETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 292 Plt--~-~t~-~li--~~-------~~l~~mk~gailIN~aR 320 (628)
... + +++ .++ |. +.+....|++++++++-
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 532 2 111 112 11 22334468899999974
No 284
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.91 E-value=0.0074 Score=62.57 Aligned_cols=111 Identities=12% Similarity=0.134 Sum_probs=66.3
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCC-hhHHHH---c---CCcc-cCHHHHhccCCEEEEcCCCCc--cc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAP-ADKARA---V---GVEL-VSFDQALATADFISLHMPLNP--TT 297 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~-~~~a~~---~---g~~~-~sl~ell~~aDvV~l~~Plt~--~t 297 (628)
++|+|||.|.+|..+|..+...|+ +|..+|.... ...+.+ . .+.. .++ +.++.||+|+++..... +|
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~t 93 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQS 93 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----CC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCCC
Confidence 799999999999999999987777 9999998642 111111 1 1222 366 67899999999974311 11
Q ss_pred c--------cccc--HHHHhcCCCCcEEEEcCCCchhcHHHHHHH--HhCCCeeEE
Q 006864 298 S--------KIFN--DETFAKMKKGVRIVNVARGGVIDEEALVRA--LDSGVVAQA 341 (628)
Q Consensus 298 ~--------~li~--~~~l~~mk~gailIN~aRg~~vde~aL~~a--L~~g~i~ga 341 (628)
+ .++. ...+....|.+++++++-.-=+....+.+. +...++.|.
T Consensus 94 R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 94 YLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 1 0110 112233348999999876333334444333 224477776
No 285
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.89 E-value=0.011 Score=64.60 Aligned_cols=67 Identities=18% Similarity=0.234 Sum_probs=48.9
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhH--HHHcC-Cc-----cc---CHHHHhccCCEEEEcCCCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADK--ARAVG-VE-----LV---SFDQALATADFISLHMPLN 294 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~--a~~~g-~~-----~~---sl~ell~~aDvV~l~~Plt 294 (628)
.+|+++|+|.|.||+.+++.|...|.+|.++|+...... +...+ +. .. +++++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 478999999999999999999999999999998642111 11111 11 11 3557888999999999964
No 286
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=95.88 E-value=0.1 Score=54.43 Aligned_cols=127 Identities=19% Similarity=0.189 Sum_probs=83.2
Q ss_pred HHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec-ChhHHHHHHHHHc
Q 006864 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-GKVGSEVARRAKG 250 (628)
Q Consensus 172 a~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl-G~IG~~vA~~l~~ 250 (628)
|...+|+|+|+-+....++- +++=++.+.++ .| .+.|++|+++|= +++..+.+..+..
T Consensus 121 A~~~~vPVINag~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~glkva~vGD~~rva~Sl~~~~~~ 179 (323)
T 3gd5_A 121 AHYAGIPVINALTDHEHPCQ--VVADLLTIREN------------------FG-RLAGLKLAYVGDGNNVAHSLLLGCAK 179 (323)
T ss_dssp HHHHCSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHH------------------hC-CCCCCEEEEECCCCcHHHHHHHHHHH
Confidence 34457899998664433331 22223333321 12 378999999986 6888899999999
Q ss_pred CCCEEEEECCCC--Ch-hH-------HHHcCC--cc-cCHHHHhccCCEEEEcCCCC--cc----------ccccccHHH
Q 006864 251 LGMNVIAHDPYA--PA-DK-------ARAVGV--EL-VSFDQALATADFISLHMPLN--PT----------TSKIFNDET 305 (628)
Q Consensus 251 ~G~~V~~~d~~~--~~-~~-------a~~~g~--~~-~sl~ell~~aDvV~l~~Plt--~~----------t~~li~~~~ 305 (628)
+|++|.+..|.. +. +. ++..|. +. .++++.++.||+|..-.=.. .+ ....++.+.
T Consensus 180 ~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~el 259 (323)
T 3gd5_A 180 VGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAAL 259 (323)
T ss_dssp HTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHHH
T ss_pred cCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHH
Confidence 999999988753 22 11 123453 22 38999999999998753111 00 124578889
Q ss_pred HhcCCCCcEEEEcC
Q 006864 306 FAKMKKGVRIVNVA 319 (628)
Q Consensus 306 l~~mk~gailIN~a 319 (628)
++.+|++++|.-|.
T Consensus 260 l~~ak~dai~mHcl 273 (323)
T 3gd5_A 260 LNCAAAEAIVLHCL 273 (323)
T ss_dssp HHTSCTTCEEEECS
T ss_pred HhhcCCCcEEECCC
Confidence 99999999999885
No 287
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.87 E-value=0.017 Score=60.36 Aligned_cols=92 Identities=15% Similarity=0.234 Sum_probs=60.5
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhH------HHH-----cCCc--c-cCHHHHhccCCEEEEcC
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADK------ARA-----VGVE--L-VSFDQALATADFISLHM 291 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~------a~~-----~g~~--~-~sl~ell~~aDvV~l~~ 291 (628)
+..++|+|||.|.+|..+|..|...|+ +|..||....... ... .... . .+. +.++.||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 456799999999999999999988887 9999998754211 110 1222 1 244 7899999999997
Q ss_pred CCCcccccc-----c--cH-------HHHhcCCCCcEEEEcCC
Q 006864 292 PLNPTTSKI-----F--ND-------ETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 292 Plt~~t~~l-----i--~~-------~~l~~mk~gailIN~aR 320 (628)
+.. ...++ + |. ..+....|++++++++-
T Consensus 84 g~p-~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 84 GVP-RKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SCC-CC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CcC-CCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 632 22222 1 21 12333458899999874
No 288
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.86 E-value=0.0085 Score=62.38 Aligned_cols=113 Identities=15% Similarity=0.039 Sum_probs=69.1
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChh--HHHHc---------CCcc-cCHHHHhccCCEEEEcCCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPAD--KARAV---------GVEL-VSFDQALATADFISLHMPL 293 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~--~a~~~---------g~~~-~sl~ell~~aDvV~l~~Pl 293 (628)
..++|+|||.|.+|..+|..+...|. +|..||...... .+.++ .+.. .+..+.++.||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 34699999999999999999986664 899999753111 11110 1111 1446779999999999975
Q ss_pred Ccccccc-------ccH-------HHHhcCCCCcEEEEcCCCchhcHHHHHHH--HhCCCeeEE
Q 006864 294 NPTTSKI-------FND-------ETFAKMKKGVRIVNVARGGVIDEEALVRA--LDSGVVAQA 341 (628)
Q Consensus 294 t~~t~~l-------i~~-------~~l~~mk~gailIN~aRg~~vde~aL~~a--L~~g~i~ga 341 (628)
... .++ .|. +.+....|++++++++-.-=+....+.+. +...++.|.
T Consensus 85 ~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 85 AQK-PGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCC-TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCC-CCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEec
Confidence 432 221 111 22334478999999763332334444444 333466665
No 289
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.86 E-value=0.01 Score=62.13 Aligned_cols=63 Identities=19% Similarity=0.293 Sum_probs=46.9
Q ss_pred CeEEEEecChhHH-HHHHHHHcC-CCEEE-EECCCCChhHHHH---cCCcc-cCHHHHhcc--CCEEEEcCC
Q 006864 230 KTLAVMGFGKVGS-EVARRAKGL-GMNVI-AHDPYAPADKARA---VGVEL-VSFDQALAT--ADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~-~vA~~l~~~-G~~V~-~~d~~~~~~~a~~---~g~~~-~sl~ell~~--aDvV~l~~P 292 (628)
.++||||+|.||+ ..+..++.. +++|. ++|+......+.. .++.. .++++++++ .|+|++++|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 74 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTP 74 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSC
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCC
Confidence 3799999999999 577777665 68876 5787743344444 34543 489999986 899999998
No 290
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.85 E-value=0.0075 Score=63.26 Aligned_cols=65 Identities=15% Similarity=0.237 Sum_probs=46.4
Q ss_pred CeEEEEecChhHHH-HHHHHHcC-CCEEE-EECCCCChhHHHHcCCc-ccCHHHHhcc--CCEEEEcCCCC
Q 006864 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAPADKARAVGVE-LVSFDQALAT--ADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~g~~-~~sl~ell~~--aDvV~l~~Plt 294 (628)
.++||||+|.||+. .+..++.. +++|. ++|+..........++. +.++++++++ .|+|++++|-.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 78 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPND 78 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChH
Confidence 47999999999997 78888766 68876 56876422111111333 3489999976 99999999843
No 291
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.84 E-value=0.015 Score=61.29 Aligned_cols=84 Identities=15% Similarity=0.225 Sum_probs=51.7
Q ss_pred eEEEEecChhHHHHHHHHHcC-CCEEEE-ECCCCCh--hHHHHcCCccc------------------CHHHHhccCCEEE
Q 006864 231 TLAVMGFGKVGSEVARRAKGL-GMNVIA-HDPYAPA--DKARAVGVELV------------------SFDQALATADFIS 288 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~~--~~a~~~g~~~~------------------sl~ell~~aDvV~ 288 (628)
++||+|+|+||+.+++.+... ++++.+ .|+.... ..+...|+... ++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999999865 578765 4654321 12222233211 3446667899999
Q ss_pred EcCCCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 289 l~~Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
.|+|.... .. .... .++.|+.+|+.+
T Consensus 83 ~aTp~~~s-~~--~a~~--~~~aG~kvV~~s 108 (340)
T 1b7g_O 83 DTTPNGVG-AQ--YKPI--YLQLQRNAIFQG 108 (340)
T ss_dssp ECCSTTHH-HH--HHHH--HHHTTCEEEECT
T ss_pred ECCCCchh-HH--HHHH--HHHcCCeEEEeC
Confidence 99984421 11 1111 235577677654
No 292
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.82 E-value=0.0099 Score=63.08 Aligned_cols=64 Identities=22% Similarity=0.350 Sum_probs=46.6
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcC-C---ccc---CHHHHhccCCEEEE
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVG-V---ELV---SFDQALATADFISL 289 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g-~---~~~---sl~ell~~aDvV~l 289 (628)
.+.||+|||+|.|.+|+.+++.++.+|++|+++|++.......-.. . ... .+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 4679999999999999999999999999999999875321111000 0 111 26677888998854
No 293
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.81 E-value=0.011 Score=62.06 Aligned_cols=63 Identities=19% Similarity=0.306 Sum_probs=46.3
Q ss_pred CeEEEEecChhHHHHHHHHHcC--------CCEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL--------GMNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~--------G~~V~~-~d~~~~--~~~a~~~g~~--~~sl~ell~--~aDvV~l~~P 292 (628)
-+|||||+|.||+.-++.++.+ +++|.+ +|+... ...+++.|+. +.+++++++ +.|+|++++|
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP 103 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP 103 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC
Confidence 4899999999999877766543 567765 687653 3345667774 348999996 4799999999
No 294
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.79 E-value=0.098 Score=55.26 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=83.2
Q ss_pred HHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccc---ccccceeeecCCeEEEEecC-hhHHHHHH
Q 006864 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWL---RSKYVGVSLVGKTLAVMGFG-KVGSEVAR 246 (628)
Q Consensus 171 aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~---~~~~~g~~l~GktiGIIGlG-~IG~~vA~ 246 (628)
.|...+|+|+|+-+....++ .+++=++.+.+++ |.+. ........+.|++|++||=+ ++..+++.
T Consensus 138 lA~~s~vPVINag~d~~HPt--QaLaDl~TI~E~~---------G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~ 206 (353)
T 3sds_A 138 LAKHSSVPVINALCDTFHPL--QAIADFLTIHESF---------ASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAI 206 (353)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHT---------C--------CTTCCSCTTCEEEEESCCCHHHHHHHH
T ss_pred HHhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHh---------CCCcccccccccccccCCCEEEEECCCchHHHHHHH
Confidence 34556899999854433222 1233333333322 2110 00112345799999999976 57788888
Q ss_pred HHHcCCCEEEEECCCC---ChhH---HHHc------C--Ccc-cCHHHHhccCCEEEEcC--CCCcc----------ccc
Q 006864 247 RAKGLGMNVIAHDPYA---PADK---ARAV------G--VEL-VSFDQALATADFISLHM--PLNPT----------TSK 299 (628)
Q Consensus 247 ~l~~~G~~V~~~d~~~---~~~~---a~~~------g--~~~-~sl~ell~~aDvV~l~~--Plt~~----------t~~ 299 (628)
.+..||++|.+..|.. +.+. +++. | +.. .+++|.++.||+|..-. +...+ ...
T Consensus 207 ~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y 286 (353)
T 3sds_A 207 AATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDF 286 (353)
T ss_dssp HHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTTC
T ss_pred HHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCc
Confidence 8899999999988753 2221 1221 2 222 38999999999998743 22221 124
Q ss_pred cccHHHHhc--CCCCcEEEEcC
Q 006864 300 IFNDETFAK--MKKGVRIVNVA 319 (628)
Q Consensus 300 li~~~~l~~--mk~gailIN~a 319 (628)
.++.+.+++ +|++++|.-|.
T Consensus 287 ~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 287 KVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CBCHHHHHHHTCCTTCEEEECS
T ss_pred eecHHHHhhcccCCCcEEECCC
Confidence 578888887 78888888885
No 295
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.78 E-value=0.014 Score=64.31 Aligned_cols=97 Identities=22% Similarity=0.342 Sum_probs=69.5
Q ss_pred eeeecCCeEEEEecC----------hhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcc-cCHHHHhccCCEEEEcCC
Q 006864 224 GVSLVGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL-VSFDQALATADFISLHMP 292 (628)
Q Consensus 224 g~~l~GktiGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-~sl~ell~~aDvV~l~~P 292 (628)
+..+.|++|+|+|+- .=...+++.|...|.+|.+|||+.... . .+.+ .++++.++.||+|+++++
T Consensus 348 ~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~--~--~~~~~~~~~~~~~~ad~vvi~t~ 423 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNY--P--GVEISDNLEEVVRNADAIVVLAG 423 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCB--T--TBCEESCHHHHHTTCSEEEECSC
T ss_pred ccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccc--c--CcceecCHHHHHhcCCEEEEecC
Confidence 457899999999974 235889999999999999999997521 1 1222 378999999999999987
Q ss_pred CCccccccccHHH-HhcCC-CCcEEEEcCCCchhcHHH
Q 006864 293 LNPTTSKIFNDET-FAKMK-KGVRIVNVARGGVIDEEA 328 (628)
Q Consensus 293 lt~~t~~li~~~~-l~~mk-~gailIN~aRg~~vde~a 328 (628)
.++-+. ++-+. .+.|+ +..+|+|+ |+ +.|.+.
T Consensus 424 -~~~f~~-~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~ 457 (478)
T 3g79_A 424 -HSAYSS-LKADWAKKVSAKANPVIIDG-RN-VIEPDE 457 (478)
T ss_dssp -CHHHHS-CCHHHHHHHHCCSSCEEEES-SS-CSCHHH
T ss_pred -CHHHHh-hhHHHHHHHhccCCCEEEEC-CC-CCCHHH
Confidence 333333 34443 44577 47899995 44 456554
No 296
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.77 E-value=0.014 Score=60.07 Aligned_cols=104 Identities=18% Similarity=0.248 Sum_probs=66.3
Q ss_pred CCeEEEEec-ChhHHHHHHHHHcCCCEEE-EECCCCChhHHHHcCCccc-CHHHHhc--cCCEEEEcCCCCccccccccH
Q 006864 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVI-AHDPYAPADKARAVGVELV-SFDQALA--TADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 229 GktiGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~~-sl~ell~--~aDvV~l~~Plt~~t~~li~~ 303 (628)
..+|+|+|+ |++|+.+++.++..|++++ .+||..... ...|+... +++++.+ ..|++++++|-. .....+ .
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~--~~~G~~vy~sl~el~~~~~~D~viI~tP~~-~~~~~~-~ 82 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT--THLGLPVFNTVREAVAATGATASVIYVPAP-FCKDSI-L 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCGG-GHHHHH-H
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc--eeCCeeccCCHHHHhhcCCCCEEEEecCHH-HHHHHH-H
Confidence 368999999 9999999999998899855 578753201 13465544 7999998 899999999932 222222 2
Q ss_pred HHHhcCCCCcEEEEcCCCc-hhcHHHHHHHHhCCCe
Q 006864 304 ETFAKMKKGVRIVNVARGG-VIDEEALVRALDSGVV 338 (628)
Q Consensus 304 ~~l~~mk~gailIN~aRg~-~vde~aL~~aL~~g~i 338 (628)
+.++ .... .+|..+-|- .-+.+.|.++.++..+
T Consensus 83 ea~~-~Gi~-~iVi~t~G~~~~~~~~l~~~A~~~gv 116 (288)
T 2nu8_A 83 EAID-AGIK-LIITITEGIPTLDMLTVKVKLDEAGV 116 (288)
T ss_dssp HHHH-TTCS-EEEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 2232 2222 234444443 3345578887766443
No 297
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.0089 Score=64.17 Aligned_cols=89 Identities=16% Similarity=0.234 Sum_probs=61.1
Q ss_pred eEEEEecChhHHHHHHHHHcCC--------CEEEEECCCCC---hhHHHHc-----------CCc------c-cCHHHHh
Q 006864 231 TLAVMGFGKVGSEVARRAKGLG--------MNVIAHDPYAP---ADKARAV-----------GVE------L-VSFDQAL 281 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~G--------~~V~~~d~~~~---~~~a~~~-----------g~~------~-~sl~ell 281 (628)
+|+|||.|.-|.++|..|...| .+|..|.+... ....+.. |++ . .++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999997543 46888865431 1111110 121 1 2799999
Q ss_pred ccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006864 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 282 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 321 (628)
+.||+|++++|. ...+.++ ++.-..++++..+|+++-|
T Consensus 116 ~~ad~ii~avPs-~~~r~~l-~~l~~~~~~~~~iv~~~KG 153 (391)
T 4fgw_A 116 KDVDIIVFNIPH-QFLPRIC-SQLKGHVDSHVRAISCLKG 153 (391)
T ss_dssp TTCSEEEECSCG-GGHHHHH-HHHTTTSCTTCEEEECCCS
T ss_pred hcCCEEEEECCh-hhhHHHH-HHhccccCCCceeEEeccc
Confidence 999999999993 2233332 3334457889999999877
No 298
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.72 E-value=0.0063 Score=66.34 Aligned_cols=111 Identities=14% Similarity=0.173 Sum_probs=72.9
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC---h--hHHHHcCCccc---CHHHHhcc-CCEEEEcCCCCcc
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP---A--DKARAVGVELV---SFDQALAT-ADFISLHMPLNPT 296 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~---~--~~a~~~g~~~~---sl~ell~~-aDvV~l~~Plt~~ 296 (628)
++.||++.|||+|..|.++|+.|+..|++|.++|.... . +..++.|++.. ..++++.. +|+|++.--..++
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 46799999999999999999999999999999997541 1 23345677543 23456676 8999885322222
Q ss_pred c----------cccccHH-HHhc-CCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 297 T----------SKIFNDE-TFAK-MKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 297 t----------~~li~~~-~l~~-mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
. ..++.+- .+.. ++.-.+-|-=+.|+.--..-+...|+..
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 137 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAG 137 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 1 1134432 3333 3333344444578888787777777653
No 299
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.71 E-value=0.017 Score=60.34 Aligned_cols=88 Identities=22% Similarity=0.264 Sum_probs=63.9
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc--CHHHHhccCCEEEEcCCCCccccccccHH
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV--SFDQALATADFISLHMPLNPTTSKIFNDE 304 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~--sl~ell~~aDvV~l~~Plt~~t~~li~~~ 304 (628)
.|.++.|+|.|.||...++.++.+|++|++.++.. ..+.++++|+..+ +.+++.+..|+|+-++.... .-..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~-----~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY-----DLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC-----CHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH-----HHHH
Confidence 47899999999999999999999999999998765 4566777776432 22333335788877765321 1245
Q ss_pred HHhcCCCCcEEEEcCC
Q 006864 305 TFAKMKKGVRIVNVAR 320 (628)
Q Consensus 305 ~l~~mk~gailIN~aR 320 (628)
.++.++++..++.++.
T Consensus 251 ~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 251 YLKLLTYNGDLALVGL 266 (348)
T ss_dssp HHTTEEEEEEEEECCC
T ss_pred HHHHHhcCCEEEEECC
Confidence 6667788888888764
No 300
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.69 E-value=0.0065 Score=59.97 Aligned_cols=64 Identities=17% Similarity=0.271 Sum_probs=41.0
Q ss_pred CeEEEEecChhHHHHHHH--HHcCCCEEEE-ECCCCChhHHHHcCCc---ccCHHHHhccCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARR--AKGLGMNVIA-HDPYAPADKARAVGVE---LVSFDQALATADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~--l~~~G~~V~~-~d~~~~~~~a~~~g~~---~~sl~ell~~aDvV~l~~Pl 293 (628)
++++|||.|++|+.+++. ....|+++.+ +|...........|+. ..++++++++.|++++++|-
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 479999999999999993 4466888776 4654322111112222 33789999777999999993
No 301
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.68 E-value=0.013 Score=61.43 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=61.3
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhH--HHHc--------CCcc-cCHHHHhccCCEEEEcCCC
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--ARAV--------GVEL-VSFDQALATADFISLHMPL 293 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~--------g~~~-~sl~ell~~aDvV~l~~Pl 293 (628)
-.+++|+|||.|.||+.+|..+...|+ ++..||....... +.++ .+.. .+..+.++.||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 356899999999999999999987776 9999998532111 1111 1111 2346789999999998753
Q ss_pred Cc---cccc-cc--cH-------HHHhcCCCCcEEEEcCCCchhcH
Q 006864 294 NP---TTSK-IF--ND-------ETFAKMKKGVRIVNVARGGVIDE 326 (628)
Q Consensus 294 t~---~t~~-li--~~-------~~l~~mk~gailIN~aRg~~vde 326 (628)
.. +++. ++ |. +.+....|++++++++ ..+|.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvdi 130 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDI 130 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECS--SSHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchHH
Confidence 21 1221 22 11 2344456788999986 44443
No 302
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.67 E-value=0.067 Score=55.07 Aligned_cols=67 Identities=18% Similarity=0.221 Sum_probs=54.0
Q ss_pred eecCCeEEEEec---ChhHHHHHHHHHcCCCEEEEECCCC--ChhHHHHcCCcc-cCHHHHhccCCEEEEcCCCC
Q 006864 226 SLVGKTLAVMGF---GKVGSEVARRAKGLGMNVIAHDPYA--PADKARAVGVEL-VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 226 ~l~GktiGIIGl---G~IG~~vA~~l~~~G~~V~~~d~~~--~~~~a~~~g~~~-~sl~ell~~aDvV~l~~Plt 294 (628)
.+.|.+|+++|= +++..+.+..+..||++|....|.. +.. ..+.|++. .++++.++.||+|.. +-..
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~-~~~~g~~~~~d~~eav~~aDvvy~-~~~q 215 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRD-VEVFKVDVFDDVDKGIDWADVVIW-LRLQ 215 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-GGGGCEEEESSHHHHHHHCSEEEE-CCCC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCch-HHHCCCEEEcCHHHHhCCCCEEEE-eCcc
Confidence 478999999997 8999999999999999999988753 222 23456553 389999999999998 6654
No 303
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=95.66 E-value=0.12 Score=55.79 Aligned_cols=107 Identities=21% Similarity=0.311 Sum_probs=73.3
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEE-ECC-------CC-ChhHHHHc----C------CcccCHHHHhc-c
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA-HDP-------YA-PADKARAV----G------VELVSFDQALA-T 283 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~-~d~-------~~-~~~~a~~~----g------~~~~sl~ell~-~ 283 (628)
|.++.|+|+.|-|+|++|+.+|+.|..+|.+|++ .|. .- +.+...+. | .+.++-++++. .
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 4579999999999999999999999999999864 343 31 22222211 2 23456677664 7
Q ss_pred CCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 284 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
||+++-|.. .+.|+.+....++ -.+|+-.|-+.+ ..++ .+.|.+..|
T Consensus 296 ~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t~eA-~~iL~~rGI 342 (424)
T 3k92_A 296 CDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-TIDA-TKILNERGV 342 (424)
T ss_dssp CSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTC
T ss_pred ccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-CHHH-HHHHHHCCC
Confidence 999987764 4677777777774 567777788875 4444 355555444
No 304
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=95.66 E-value=0.013 Score=61.26 Aligned_cols=64 Identities=16% Similarity=0.193 Sum_probs=44.7
Q ss_pred CeEEEEecChhHHH-HHH-HHHc-CCCEEE-EECCCCChh-HHHH-cCCcc-cCHHHHhcc--CCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSE-VAR-RAKG-LGMNVI-AHDPYAPAD-KARA-VGVEL-VSFDQALAT--ADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~-vA~-~l~~-~G~~V~-~~d~~~~~~-~a~~-~g~~~-~sl~ell~~--aDvV~l~~Pl 293 (628)
.++||||+|.||+. .+. .++. -++++. ++|+..... .+.. .++.. .++++++++ .|+|++++|-
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHA 75 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCG
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCCh
Confidence 37999999999996 455 3343 478877 578875332 2222 24443 489999986 8999999983
No 305
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.57 E-value=0.031 Score=61.51 Aligned_cols=100 Identities=22% Similarity=0.274 Sum_probs=69.7
Q ss_pred eeeecCCeEEEEecC----------hhHHHHHHHHHcCCCEEEEECCCCChhHHHHcC------------Cccc-CHHHH
Q 006864 224 GVSLVGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKARAVG------------VELV-SFDQA 280 (628)
Q Consensus 224 g~~l~GktiGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g------------~~~~-sl~el 280 (628)
+..+.|++|+|+|+- .=...+++.|...|++|.+|||....+....++ +..+ ++++.
T Consensus 323 ~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (478)
T 2y0c_A 323 GEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQA 402 (478)
T ss_dssp CSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHH
T ss_pred cccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHH
Confidence 456899999999984 256789999999999999999996432112222 3433 68899
Q ss_pred hccCCEEEEcCCCCccccccccHHHH-hcCCCCcEEEEcCCCchhcHHH
Q 006864 281 LATADFISLHMPLNPTTSKIFNDETF-AKMKKGVRIVNVARGGVIDEEA 328 (628)
Q Consensus 281 l~~aDvV~l~~Plt~~t~~li~~~~l-~~mk~gailIN~aRg~~vde~a 328 (628)
++.||+|++++.-. +-+. ++-+.+ +.|+ ..+|+|+ |+ +.|.+.
T Consensus 403 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~~ 446 (478)
T 2y0c_A 403 ARDADALVIVTEWK-IFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPET 446 (478)
T ss_dssp TTTCSEEEECSCCG-GGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHHH
T ss_pred HhCCCEEEEecCCh-Hhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHHH
Confidence 99999999998743 3332 355544 4455 4789997 43 455543
No 306
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.57 E-value=0.031 Score=53.26 Aligned_cols=93 Identities=16% Similarity=0.240 Sum_probs=57.8
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc--CHH----HHhccCCEEEEcCCCCccccc---
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV--SFD----QALATADFISLHMPLNPTTSK--- 299 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~--sl~----ell~~aDvV~l~~Plt~~t~~--- 299 (628)
++|.|.| .|.||+.+++.|...|++|++.++..........+++.+ ++. +.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 4789999 599999999999999999999988753221111333322 221 678889999888865432211
Q ss_pred cccHHHHhcCCC--CcEEEEcCCCc
Q 006864 300 IFNDETFAKMKK--GVRIVNVARGG 322 (628)
Q Consensus 300 li~~~~l~~mk~--gailIN~aRg~ 322 (628)
......++.|++ ...+|.++...
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCceEEEEecce
Confidence 011334444443 24666665543
No 307
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.55 E-value=0.027 Score=59.70 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=54.9
Q ss_pred CCeEEEEe-cChhHHHHHHHHHcCC-CEEEEECCCCCh--hHHHH----cC-----CcccCHHHHhccCCEEEEcCCCCc
Q 006864 229 GKTLAVMG-FGKVGSEVARRAKGLG-MNVIAHDPYAPA--DKARA----VG-----VELVSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 229 GktiGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~--~~a~~----~g-----~~~~sl~ell~~aDvV~l~~Plt~ 295 (628)
..++||+| +|.||+.+.+.|.... +++.+....... ..... .+ +...+ ++.+..+|+|++|+|...
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~~ 94 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGT 94 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCchh
Confidence 45899999 9999999999998765 587776433211 11111 11 11123 556678999999998443
Q ss_pred cccccccHHHHhcCCCCcEEEEcCC
Q 006864 296 TTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 296 ~t~~li~~~~l~~mk~gailIN~aR 320 (628)
. .+.....+.|+.+|+.+.
T Consensus 95 s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 95 T------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp H------HHHHHTSCTTCEEEECSS
T ss_pred H------HHHHHHHhCCCEEEECCc
Confidence 1 222233377999999874
No 308
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.53 E-value=0.0074 Score=63.58 Aligned_cols=91 Identities=11% Similarity=0.063 Sum_probs=62.1
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC---C-hhHHHHcCCcccC---HHHHh----ccCCEEEEcCCCC
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA---P-ADKARAVGVELVS---FDQAL----ATADFISLHMPLN 294 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~---~-~~~a~~~g~~~~s---l~ell----~~aDvV~l~~Plt 294 (628)
.+.|+++.|+|.|.||..+++.++.+|++|++.++.. . .+.++++|+..++ +.+.+ ...|+|+-++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 5679999999999999999999999999999998764 2 2345556654331 11111 2478887777632
Q ss_pred ccccccccHHHHhcCCCCcEEEEcCC
Q 006864 295 PTTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~gailIN~aR 320 (628)
... + ...+..|+++..+++++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 211 0 445666777778887763
No 309
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.50 E-value=0.021 Score=59.96 Aligned_cols=89 Identities=21% Similarity=0.288 Sum_probs=65.2
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc-------CHHHHh-ccCCEEEEcCCCC-ccc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-------SFDQAL-ATADFISLHMPLN-PTT 297 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-------sl~ell-~~aDvV~l~~Plt-~~t 297 (628)
.|+++.|+|.|.||...++.++.+|++|++.++.. ..+.++++|+..+ ++.+.+ ...|+|+-++..+ +++
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~ 258 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID 258 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH
Confidence 47899999999999999999999999999998765 4556677786432 222222 3689999888742 111
Q ss_pred cccccHHHHhcCCCCcEEEEcCC
Q 006864 298 SKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 298 ~~li~~~~l~~mk~gailIN~aR 320 (628)
-...++.|+++..++.++.
T Consensus 259 ----~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 259 ----FNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ----TTTGGGGEEEEEEEEECCC
T ss_pred ----HHHHHHHhcCCCEEEEecC
Confidence 2345677889999998874
No 310
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.50 E-value=0.011 Score=63.37 Aligned_cols=62 Identities=18% Similarity=0.309 Sum_probs=47.1
Q ss_pred eEEEEecChhHHHHHHHHHcC---------CCEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEcCC
Q 006864 231 TLAVMGFGKVGSEVARRAKGL---------GMNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMP 292 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~---------G~~V~~-~d~~~~--~~~a~~~g~~--~~sl~ell~--~aDvV~l~~P 292 (628)
+|||||+|.||+.-++.++.. +.+|.+ +|+... ...+++.|+. +.+++++++ +.|+|++++|
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp 105 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSP 105 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSC
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCC
Confidence 899999999999988888753 457665 687642 2334566764 348999996 5899999999
No 311
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.48 E-value=0.014 Score=61.42 Aligned_cols=64 Identities=13% Similarity=0.248 Sum_probs=47.3
Q ss_pred CeEEEEecChhHHH-HHHHHHcC-CCEEEE-ECCCCChhHHHHc-CCcc-cCHHHHhc--cCCEEEEcCCCC
Q 006864 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVIA-HDPYAPADKARAV-GVEL-VSFDQALA--TADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGlG~IG~~-vA~~l~~~-G~~V~~-~d~~~~~~~a~~~-g~~~-~sl~ell~--~aDvV~l~~Plt 294 (628)
.++||||+|.||+. .+..++.. +++|.+ +|+... ..+... ++.. .+++++++ +.|+|++++|-.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~-~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTE-EVKRDFPDAEVVHELEEITNDPAIELVIVTTPSG 76 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHH-HHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHH-HHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcH
Confidence 48999999999997 67777766 688764 677642 233344 4443 48999998 789999999943
No 312
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.48 E-value=0.029 Score=57.15 Aligned_cols=96 Identities=20% Similarity=0.309 Sum_probs=64.8
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChh--HHHHcC-----CcccCHHHHhccCCEEEEcCCCCc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPAD--KARAVG-----VELVSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~--~a~~~g-----~~~~sl~ell~~aDvV~l~~Plt~ 295 (628)
|.++.|+++.|+|.|-.+++++..|...|. +|..++|..... .++..+ .......+.++++|+|+.++|+--
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 456789999999999999999999999996 899999874221 111111 111223344678999999999642
Q ss_pred c--ccccccHHHHhcCCCCcEEEEcC
Q 006864 296 T--TSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 296 ~--t~~li~~~~l~~mk~gailIN~a 319 (628)
. ...-+....++.++++.++.|+-
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred CCCCCCCCChHHHhccCCCcEEEEEc
Confidence 2 12235566677777777766654
No 313
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.47 E-value=0.021 Score=62.80 Aligned_cols=102 Identities=11% Similarity=0.127 Sum_probs=66.0
Q ss_pred CeEEEEec----ChhHHHHHHHHHcC--CCEEE-EECCCCCh--hHHHHcCCc----ccCHHHHhc--cCCEEEEcCCCC
Q 006864 230 KTLAVMGF----GKVGSEVARRAKGL--GMNVI-AHDPYAPA--DKARAVGVE----LVSFDQALA--TADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGl----G~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~g~~----~~sl~ell~--~aDvV~l~~Plt 294 (628)
.+|||||+ |.||+..++.++.. +++|. ++|+.... ..++..|+. +.+++++++ +.|+|++++|-.
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~~ 119 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVP 119 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHH
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCcH
Confidence 48999999 99999999999876 67865 57876422 234455664 458999996 699999999932
Q ss_pred ccccccccHHHHhcCCCC-------cEEEEc-CCCchhcHHHHHHHHhCC
Q 006864 295 PTTSKIFNDETFAKMKKG-------VRIVNV-ARGGVIDEEALVRALDSG 336 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~g-------ailIN~-aRg~~vde~aL~~aL~~g 336 (628)
+.. +-..+.|+.| .+++.- ---.+-+.++|+++.++.
T Consensus 120 --~H~---~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~ 164 (479)
T 2nvw_A 120 --EHY---EVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQR 164 (479)
T ss_dssp --HHH---HHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTC
T ss_pred --HHH---HHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHc
Confidence 221 1222234444 366653 122344556666666553
No 314
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.46 E-value=0.011 Score=62.83 Aligned_cols=63 Identities=14% Similarity=0.301 Sum_probs=48.9
Q ss_pred CeEEEEecC-hhHHHHHHHHHcC-CCEEE-EECCCCCh--hHHHHcCCcc-cCHHHHhcc--CCEEEEcCC
Q 006864 230 KTLAVMGFG-KVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVEL-VSFDQALAT--ADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG-~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g~~~-~sl~ell~~--aDvV~l~~P 292 (628)
.+|||||+| .+|+..+..++.. ++++. ++|+.... ..+...|+.. .++++++++ .|+|++++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCC
Confidence 479999999 9999999999875 57776 47876422 2345567754 489999985 999999999
No 315
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.42 E-value=0.25 Score=53.32 Aligned_cols=108 Identities=25% Similarity=0.323 Sum_probs=71.4
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHc-CCCEEEE-EC-------CCC-ChhHH----HHcC-------CcccCHHHHhc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKG-LGMNVIA-HD-------PYA-PADKA----RAVG-------VELVSFDQALA 282 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~-~G~~V~~-~d-------~~~-~~~~a----~~~g-------~~~~sl~ell~ 282 (628)
|.++.|+++.|.|+|++|+.+|+.|.. .|.+|++ .| |.- +.+.. ...+ .+.++.++++.
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~ 283 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE 283 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc
Confidence 557999999999999999999999998 9999984 34 321 22211 1111 23446677764
Q ss_pred -cCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 283 -TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 283 -~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
.||+++-|.. .+.++.+....++ ..+|+-.+-+.+- .++-....+.|.+
T Consensus 284 ~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~a~~~l~~~Gi~ 333 (415)
T 2tmg_A 284 LDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PEADEILSRRGIL 333 (415)
T ss_dssp CSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HHHHHHHHHTTCE
T ss_pred CCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HHHHHHHHHCCCE
Confidence 7999988875 4556777777773 4577777777764 4443333334433
No 316
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.41 E-value=0.026 Score=58.30 Aligned_cols=63 Identities=19% Similarity=0.308 Sum_probs=47.4
Q ss_pred CeEEEEec-ChhHHHHHHHHHcCCCEEEE-ECCCCChhHH-HHc-CCc-ccCHHHHh----------ccCCEEEEcCC
Q 006864 230 KTLAVMGF-GKVGSEVARRAKGLGMNVIA-HDPYAPADKA-RAV-GVE-LVSFDQAL----------ATADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGl-G~IG~~vA~~l~~~G~~V~~-~d~~~~~~~a-~~~-g~~-~~sl~ell----------~~aDvV~l~~P 292 (628)
.++||||+ |.||+..++.++..+.++.+ +|+......+ +.. +.. +.++++++ .+.|+|++++|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 58999999 78999999999988988765 6877543222 222 233 34788887 67999999998
No 317
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=95.40 E-value=0.019 Score=63.21 Aligned_cols=113 Identities=17% Similarity=0.172 Sum_probs=73.2
Q ss_pred CCeEEEEecChhH--HHHHHHHH---cC-CCEEEEECCCCChh-----HHH----HcC----Ccc-cCHHHHhccCCEEE
Q 006864 229 GKTLAVMGFGKVG--SEVARRAK---GL-GMNVIAHDPYAPAD-----KAR----AVG----VEL-VSFDQALATADFIS 288 (628)
Q Consensus 229 GktiGIIGlG~IG--~~vA~~l~---~~-G~~V~~~d~~~~~~-----~a~----~~g----~~~-~sl~ell~~aDvV~ 288 (628)
.++|+|||.|.+| .++|..+. ++ |.+|..||...... ... ..+ +.. .++++.++.||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 4689999999975 55566663 34 88999999864211 001 111 112 27888999999999
Q ss_pred EcCCCC---------------------cccc-------ccc----c-------HHHHhcCCCCcEEEEcCCCchhcHHHH
Q 006864 289 LHMPLN---------------------PTTS-------KIF----N-------DETFAKMKKGVRIVNVARGGVIDEEAL 329 (628)
Q Consensus 289 l~~Plt---------------------~~t~-------~li----~-------~~~l~~mk~gailIN~aRg~~vde~aL 329 (628)
+++|.. .+|. +++ + .+.+....|++++||++-.-=+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 999741 1110 111 0 133445678999999987666666777
Q ss_pred HHHHhCCCeeEEE
Q 006864 330 VRALDSGVVAQAA 342 (628)
Q Consensus 330 ~~aL~~g~i~ga~ 342 (628)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 66 6667888864
No 318
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.39 E-value=0.024 Score=55.26 Aligned_cols=71 Identities=21% Similarity=0.288 Sum_probs=48.5
Q ss_pred eeeecCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCC-cc------cCHHHHhccCCEEEEcCCCC
Q 006864 224 GVSLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGV-EL------VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 224 g~~l~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~-~~------~sl~ell~~aDvV~l~~Plt 294 (628)
-..+.||++.|.|. |.||+.+++.|...|++|++.++.... ......++ .. .++.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 35689999999997 999999999999999999999887532 22222344 32 13456677788887766543
No 319
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.39 E-value=0.015 Score=61.43 Aligned_cols=68 Identities=15% Similarity=0.212 Sum_probs=46.3
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHc----CCcc---cCHHHHhccCCEEEEcCCCC
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAV----GVEL---VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~----g~~~---~sl~ell~~aDvV~l~~Plt 294 (628)
+-+.++|+|+|.|.+|+.+|+.|.. ..+|.+.|+.... +...+. .+.. .+|.++++++|+|+.++|-.
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred cCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 3344589999999999999999975 4788888876421 111111 1111 14778899999999999843
No 320
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.38 E-value=0.05 Score=59.81 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=70.7
Q ss_pred eecCCeEEEEec----------ChhHHHHHHHHHcCCCEEEEECCCCChhHH----HH-c-------CCcc-cCHHHHhc
Q 006864 226 SLVGKTLAVMGF----------GKVGSEVARRAKGLGMNVIAHDPYAPADKA----RA-V-------GVEL-VSFDQALA 282 (628)
Q Consensus 226 ~l~GktiGIIGl----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a----~~-~-------g~~~-~sl~ell~ 282 (628)
.+.|++|+|+|+ ..-...+++.|...|.+|.+|||+.+...+ .. + .+.. .++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 589999999997 346788999999999999999999754321 11 1 1233 36788999
Q ss_pred cCCEEEEcCCCCccccccccHHHH-hcCCCCcEEEEcCCCchhcHHHHH
Q 006864 283 TADFISLHMPLNPTTSKIFNDETF-AKMKKGVRIVNVARGGVIDEEALV 330 (628)
Q Consensus 283 ~aDvV~l~~Plt~~t~~li~~~~l-~~mk~gailIN~aRg~~vde~aL~ 330 (628)
.||+|++++.- ++-+. ++-+.+ +.|+...+|+|+ |+ ++|.+.+.
T Consensus 412 ~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~ 456 (481)
T 2o3j_A 412 GAHAIVVLTEW-DEFVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKALR 456 (481)
T ss_dssp TCSEEEECSCC-GGGTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHHH
T ss_pred CCCEEEEcCCc-HHhhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHHH
Confidence 99999999874 33333 354444 467776689986 43 45655443
No 321
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=95.34 E-value=0.15 Score=53.11 Aligned_cols=126 Identities=13% Similarity=0.008 Sum_probs=80.5
Q ss_pred HHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccce-eeecCCeEEE-----EecChhHHHH
Q 006864 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAV-----MGFGKVGSEV 244 (628)
Q Consensus 171 aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~GktiGI-----IGlG~IG~~v 244 (628)
.|...+|+|+|.-+....+.- +++=++.+.++ .| ..+. .+|++ +|=+++..+.
T Consensus 130 lA~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~------------------~g~~~l~-l~ia~a~~~~vGD~rva~Sl 188 (324)
T 1js1_X 130 FIQHSGRPVFSMEAATRHPLQ--SFADLITIEEY------------------KKTARPK-VVMTWAPHPRPLPQAVPNSF 188 (324)
T ss_dssp HHHHSSSCEEESSCSSCCHHH--HHHHHHHHHHH------------------CSSSSCE-EEEECCCCSSCCCSHHHHHH
T ss_pred HHhhCCCCEEECCCCCCCcHH--HHHHHHHHHHH------------------cCCCCee-EEEEEEcccccCCcchHHHH
Confidence 344567999998765444442 33333333332 12 1356 78999 9999999999
Q ss_pred HHHHHcCCCEEEEECCCC--ChhHHHHcCCcc-cCHHHHhccCCEEEEcCCCC--c---------cccccccHHHHhcCC
Q 006864 245 ARRAKGLGMNVIAHDPYA--PADKARAVGVEL-VSFDQALATADFISLHMPLN--P---------TTSKIFNDETFAKMK 310 (628)
Q Consensus 245 A~~l~~~G~~V~~~d~~~--~~~~a~~~g~~~-~sl~ell~~aDvV~l~~Plt--~---------~t~~li~~~~l~~mk 310 (628)
+..+..||++|....|.. +..... .++.. .+++++++.||+|..-.=.. . .....++.+.++++|
T Consensus 189 ~~~~~~~G~~v~~~~P~~~~~~~~~~-~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~ 267 (324)
T 1js1_X 189 AEWMNATDYEFVITHPEGYELDPKFV-GNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN 267 (324)
T ss_dssp HHHHHTSSSEEEEECCTTCCCCHHHH-TTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS
T ss_pred HHHHHHCCCEEEEeCCcccCCChhhc-cceEEECCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC
Confidence 999999999999998854 222111 24543 48999999999998833211 0 012445666666666
Q ss_pred CCcEEEEcC
Q 006864 311 KGVRIVNVA 319 (628)
Q Consensus 311 ~gailIN~a 319 (628)
+++|.-|.
T Consensus 268 -~ai~MHcL 275 (324)
T 1js1_X 268 -NAYFMHCL 275 (324)
T ss_dssp -SCEEECCS
T ss_pred -CcEEECCC
Confidence 66666663
No 322
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.33 E-value=0.028 Score=58.28 Aligned_cols=63 Identities=22% Similarity=0.351 Sum_probs=47.0
Q ss_pred CeEEEEec-ChhHHHHHHHHHcCCCEEEE-ECCCCChhHH-HHc-CCc-ccCHHHHh-----------ccCCEEEEcCC
Q 006864 230 KTLAVMGF-GKVGSEVARRAKGLGMNVIA-HDPYAPADKA-RAV-GVE-LVSFDQAL-----------ATADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGl-G~IG~~vA~~l~~~G~~V~~-~d~~~~~~~a-~~~-g~~-~~sl~ell-----------~~aDvV~l~~P 292 (628)
.++||||+ |.||+..++.++..+.++.+ +|+......+ ... +.. +.++++++ .+.|+|++++|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP 82 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSP 82 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSC
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCC
Confidence 58999999 79999999999988988765 6876543222 222 233 34788887 57999999998
No 323
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.32 E-value=0.26 Score=52.21 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=84.1
Q ss_pred HHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecC--hhHHHHHHHH
Q 006864 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRA 248 (628)
Q Consensus 171 aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG--~IG~~vA~~l 248 (628)
.+..-+|+|.|.-|....++- +++=++.+.++ +.+..+.|++|+++|=| ++..+.+..+
T Consensus 142 la~~s~vPVING~g~~~HPtQ--aL~Dl~Ti~e~-----------------~~~~~l~gl~ia~vGD~~~~va~S~~~~~ 202 (358)
T 4h31_A 142 LGAFAGVPVWNGLTDEFHPTQ--ILADFLTMLEH-----------------SQGKALADIQFAYLGDARNNVGNSLMVGA 202 (358)
T ss_dssp HHHHSSSCEEESCCSSCCHHH--HHHHHHHHHHT-----------------TTTCCGGGCEEEEESCTTSHHHHHHHHHH
T ss_pred hhhhccCceECCCCcCCCchH--HHHHHHHHHHH-----------------hcCCCcCceEEEecCCCCcccchHHHHHH
Confidence 455667999996555443332 22223332221 12346889999999954 8999999999
Q ss_pred HcCCCEEEEECCCC---Chh-------HHHHcCCcc---cCHHHHhccCCEEEEcCCCC----cc---------cccccc
Q 006864 249 KGLGMNVIAHDPYA---PAD-------KARAVGVEL---VSFDQALATADFISLHMPLN----PT---------TSKIFN 302 (628)
Q Consensus 249 ~~~G~~V~~~d~~~---~~~-------~a~~~g~~~---~sl~ell~~aDvV~l~~Plt----~~---------t~~li~ 302 (628)
..||++|....|.. +.+ .+.+.|... .+++|.++.||+|..-.=.. ++ ...-++
T Consensus 203 ~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~v~ 282 (358)
T 4h31_A 203 AKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVN 282 (358)
T ss_dssp HHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBC
T ss_pred HhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCcccC
Confidence 99999999998742 221 123345432 38999999999998532211 11 113467
Q ss_pred HHHHhc-CCCCcEEEEcC
Q 006864 303 DETFAK-MKKGVRIVNVA 319 (628)
Q Consensus 303 ~~~l~~-mk~gailIN~a 319 (628)
.+.+++ .||+++|.-|.
T Consensus 283 ~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 283 MNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp HHHHHHTTCTTCEEEECS
T ss_pred HHHHHhcCCCCcEEECCC
Confidence 788876 47889998885
No 324
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=95.30 E-value=0.27 Score=51.97 Aligned_cols=128 Identities=19% Similarity=0.112 Sum_probs=83.5
Q ss_pred hHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCccccccccee-eecCCe--EEEEec---C--hhH
Q 006864 170 QAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGV-SLVGKT--LAVMGF---G--KVG 241 (628)
Q Consensus 170 ~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~-~l~Gkt--iGIIGl---G--~IG 241 (628)
..|...+|+|+|+-... .++- +++=++.+.++ .|. .+.|++ |+++|= | ++.
T Consensus 151 ~lA~~~~vPVINag~g~-HPtQ--aLaDl~TI~E~------------------~g~~~l~glkvvva~vGDl~~~~nrva 209 (359)
T 1zq6_A 151 SFAKYSPVPVINMETIT-HPCQ--ELAHALALQEH------------------FGTPDLRGKKYVLTWTYHPKPLNTAVA 209 (359)
T ss_dssp HHHHHCSSCEEESSSSC-CHHH--HHHHHHHHHHH------------------HTSSCCTTCEEEEEECCCSSCCCSHHH
T ss_pred HHHHhCCCCEEeCCCCC-CcHH--HHHHHHHHHHH------------------hCCCcccCCeeEEEEEecccccccchH
Confidence 34456789999987665 4442 23333333332 122 378999 999997 4 899
Q ss_pred HHHHHHHHcCCCEEEEECCC-C---ChhH---H----HHcCCc--c-cCHHHHhccCCEEEEcCCCC-----cc------
Q 006864 242 SEVARRAKGLGMNVIAHDPY-A---PADK---A----RAVGVE--L-VSFDQALATADFISLHMPLN-----PT------ 296 (628)
Q Consensus 242 ~~vA~~l~~~G~~V~~~d~~-~---~~~~---a----~~~g~~--~-~sl~ell~~aDvV~l~~Plt-----~~------ 296 (628)
.+.+..+..||++|.+..|. . +.+. + ++.|.. . .+++++++.||+|..-.=.. ++
T Consensus 210 ~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~~ 289 (359)
T 1zq6_A 210 NSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPI 289 (359)
T ss_dssp HHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHHH
Confidence 99999999999999999876 2 2221 1 144433 2 38999999999998755222 10
Q ss_pred ----ccccccHHHHhcCCCCcEEEEcC
Q 006864 297 ----TSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 297 ----t~~li~~~~l~~mk~gailIN~a 319 (628)
....++.+.++++| +++|.-|.
T Consensus 290 ~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 290 RDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp HGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred HHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 12345677777777 77777764
No 325
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.30 E-value=0.017 Score=62.60 Aligned_cols=102 Identities=10% Similarity=0.125 Sum_probs=65.4
Q ss_pred CeEEEEec----ChhHHHHHHHHHcC--CCEEE-EECCCCCh--hHHHHcCCc----ccCHHHHhc--cCCEEEEcCCCC
Q 006864 230 KTLAVMGF----GKVGSEVARRAKGL--GMNVI-AHDPYAPA--DKARAVGVE----LVSFDQALA--TADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIGl----G~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~g~~----~~sl~ell~--~aDvV~l~~Plt 294 (628)
.+|||||+ |.||+..++.++.. ++++. ++|+.... ..++..|+. +.+++++++ +.|+|++++|-.
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCcH
Confidence 48999999 99999999999887 67875 57876422 234455664 348999997 699999999832
Q ss_pred ccccccccHHHHhcCCCC-------cEEEEc-CCCchhcHHHHHHHHhCC
Q 006864 295 PTTSKIFNDETFAKMKKG-------VRIVNV-ARGGVIDEEALVRALDSG 336 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~g-------ailIN~-aRg~~vde~aL~~aL~~g 336 (628)
... +-..+.++.| .+++.- .--.+-+.+.|.++.++.
T Consensus 101 --~H~---~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~ 145 (438)
T 3btv_A 101 --SHY---EVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAER 145 (438)
T ss_dssp --HHH---HHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTT
T ss_pred --HHH---HHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHc
Confidence 221 1122223344 355552 222344556666666554
No 326
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.27 E-value=0.047 Score=59.11 Aligned_cols=95 Identities=19% Similarity=0.233 Sum_probs=58.7
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEE-CCCC-------------ChhH---H-HHcC-------CcccCHH
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAH-DPYA-------------PADK---A-RAVG-------VELVSFD 278 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~-d~~~-------------~~~~---a-~~~g-------~~~~sl~ 278 (628)
|.++.|+++.|.|+|++|+.+|+.|..+|++|++. |.+. +.+. . .+.| .+.++.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 45789999999999999999999999999999953 4441 1111 1 1111 1233344
Q ss_pred HHhc-cCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006864 279 QALA-TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (628)
Q Consensus 279 ell~-~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~v 324 (628)
+++. .||+++-|.+ .+.|+.+....+ ...+|+-.+-+.+-
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t 327 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT 327 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC
Confidence 5544 6898888764 456778777777 35677777877764
No 327
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.24 E-value=0.013 Score=61.80 Aligned_cols=62 Identities=15% Similarity=0.157 Sum_probs=46.8
Q ss_pred CeEEEEecChhHHH-HHHHHHcC-CCEEE-EECCCCChhHHHHc-CCc-ccCHHHHhcc--CCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAPADKARAV-GVE-LVSFDQALAT--ADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-g~~-~~sl~ell~~--aDvV~l~~P 292 (628)
.++||||+|.||+. .+..++.. ++++. ++|+.... .+... ++. +.++++++++ .|+|++|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL-SKERYPQASIVRSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG-GGTTCTTSEEESCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHHhCCCCceECCHHHHhcCCCCCEEEEeCC
Confidence 47999999999997 77777766 68876 46877543 23334 444 3489999987 999999999
No 328
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.23 E-value=0.029 Score=58.35 Aligned_cols=107 Identities=18% Similarity=0.151 Sum_probs=67.2
Q ss_pred CCeEEEEecChhHHH-HHHHHHcCCCEEEEECCCCCh---hHHHHcCCccc---CHHHHh-ccCCEEEEc--CCC-Cccc
Q 006864 229 GKTLAVMGFGKVGSE-VARRAKGLGMNVIAHDPYAPA---DKARAVGVELV---SFDQAL-ATADFISLH--MPL-NPTT 297 (628)
Q Consensus 229 GktiGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~---~~a~~~g~~~~---sl~ell-~~aDvV~l~--~Pl-t~~t 297 (628)
.|++.|||.|.+|.+ +|+.|+..|++|.++|..... +..++.|++.. +.+++. .++|+|+.. +|. +|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 478999999999996 999999999999999976422 23445677543 345555 579999885 332 1211
Q ss_pred c-------ccccHH-HHhc-CCCC--cEEEEcCCCchhcHHHHHHHHhC
Q 006864 298 S-------KIFNDE-TFAK-MKKG--VRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 298 ~-------~li~~~-~l~~-mk~g--ailIN~aRg~~vde~aL~~aL~~ 335 (628)
. .++.+- .|.. +.++ .+-|-=+.|+.--..-+...|+.
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~ 132 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEY 132 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHH
Confidence 1 123332 2332 2222 33344456777777766677765
No 329
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.22 E-value=0.014 Score=58.69 Aligned_cols=104 Identities=17% Similarity=0.244 Sum_probs=65.2
Q ss_pred HHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-Ch----------------hHH---
Q 006864 209 DASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PA----------------DKA--- 267 (628)
Q Consensus 209 ~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~----------------~~a--- 267 (628)
.++++-..|... .-..|++++|.|+|+|.+|..+|+.|...|. ++..+|+.. .. .++
T Consensus 10 ~Rq~~l~~~g~~--~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~ 87 (251)
T 1zud_1 10 SRQILLDDIALD--GQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVS 87 (251)
T ss_dssp HHHHTSTTTHHH--HHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHH
T ss_pred hhhcchhhcCHH--HHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHH
Confidence 344444446431 1246899999999999999999999999996 788887642 00 011
Q ss_pred ----HHc--CCc--c----c---CHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEc
Q 006864 268 ----RAV--GVE--L----V---SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 268 ----~~~--g~~--~----~---sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 318 (628)
.+. +++ . . +++++++++|+|+.++. +.+++.++++..... +.-+|..
T Consensus 88 ~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~ 149 (251)
T 1zud_1 88 QQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITA 149 (251)
T ss_dssp HHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEE
T ss_pred HHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEE
Confidence 111 111 1 1 24567778888888876 556777777665542 3345554
No 330
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.19 E-value=0.03 Score=57.72 Aligned_cols=111 Identities=18% Similarity=0.082 Sum_probs=70.7
Q ss_pred CeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhH--H----H-H--c--CC--ccc-CHHHHhccCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--A----R-A--V--GV--ELV-SFDQALATADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a----~-~--~--g~--~~~-sl~ell~~aDvV~l~~Pl 293 (628)
++|+|||.|.+|.++|..|...|. +|..||....... + . . . .. ... + .+.++.||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 479999999999999999987777 9999998642211 1 1 1 1 11 112 5 7899999999999864
Q ss_pred Ccccccc-----c--cH-------HHHhcCCCCcEEEEcCCCchhcHHHHHHH----HhCCCeeEEE--ee
Q 006864 294 NPTTSKI-----F--ND-------ETFAKMKKGVRIVNVARGGVIDEEALVRA----LDSGVVAQAA--LD 344 (628)
Q Consensus 294 t~~t~~l-----i--~~-------~~l~~mk~gailIN~aRg~~vde~aL~~a----L~~g~i~ga~--lD 344 (628)
.. ..++ + |. +.+....|++++++++ ..+|.-..+-. +...++.|.+ ||
T Consensus 80 ~~-kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 80 AR-KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CC-CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CC-CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 32 2222 1 21 2344567899999998 55554432221 1134666654 55
No 331
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.18 E-value=0.011 Score=62.23 Aligned_cols=64 Identities=28% Similarity=0.353 Sum_probs=43.4
Q ss_pred eEEEEecChhHHHHHHHHHc-CCCEEEEE-CCCCCh--hHHHHc------------------CCcc-cCHHHHhccCCEE
Q 006864 231 TLAVMGFGKVGSEVARRAKG-LGMNVIAH-DPYAPA--DKARAV------------------GVEL-VSFDQALATADFI 287 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~--~~a~~~------------------g~~~-~sl~ell~~aDvV 287 (628)
++||+|+|.||+.+++.|.. -++++.+. |+.... ..+... ++.. .+.++++..+|+|
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDvV 82 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV 82 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCEE
Confidence 79999999999999999986 56888665 443211 111111 1111 1567778899999
Q ss_pred EEcCCCC
Q 006864 288 SLHMPLN 294 (628)
Q Consensus 288 ~l~~Plt 294 (628)
+.|+|-.
T Consensus 83 ~~atp~~ 89 (337)
T 1cf2_P 83 IDCTPEG 89 (337)
T ss_dssp EECCSTT
T ss_pred EECCCch
Confidence 9999844
No 332
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.18 E-value=0.017 Score=61.68 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=49.0
Q ss_pred CeEEEEecCh---hHHHHHHHHHcCC-CEEEE--ECCCCC--hhHHHHcCCc----ccCHHHHhcc-------CCEEEEc
Q 006864 230 KTLAVMGFGK---VGSEVARRAKGLG-MNVIA--HDPYAP--ADKARAVGVE----LVSFDQALAT-------ADFISLH 290 (628)
Q Consensus 230 ktiGIIGlG~---IG~~vA~~l~~~G-~~V~~--~d~~~~--~~~a~~~g~~----~~sl~ell~~-------aDvV~l~ 290 (628)
.+|||||+|. ||+..+..++..+ +++++ +|+... ...+++.|+. +.++++++++ .|+|+++
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~ 92 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIA 92 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEE
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEEC
Confidence 5899999999 9999998887665 78764 688652 2334567773 3489999975 9999999
Q ss_pred CC
Q 006864 291 MP 292 (628)
Q Consensus 291 ~P 292 (628)
+|
T Consensus 93 tp 94 (398)
T 3dty_A 93 TP 94 (398)
T ss_dssp SC
T ss_pred CC
Confidence 99
No 333
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.18 E-value=0.03 Score=59.04 Aligned_cols=85 Identities=22% Similarity=0.291 Sum_probs=53.2
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCC-CEEEEECCCCChh-HHHH--------cCCcccCHHHHhccCCEEEEcCCCCcccc
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLG-MNVIAHDPYAPAD-KARA--------VGVELVSFDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~~-~a~~--------~g~~~~sl~ell~~aDvV~l~~Plt~~t~ 298 (628)
.+|||+| .|.||+.+.+.|.... +++.+........ ...+ ......++++ +..+|+|++|+|.... +
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s-~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVF-A 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHH-H
Confidence 4899999 8999999999998665 5776653322111 1110 1122234444 5789999999995532 2
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aR 320 (628)
... . ..++.|+.+|+.+-
T Consensus 83 ~~a--~--~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 83 REF--D--RYSALAPVLVDLSA 100 (345)
T ss_dssp HTH--H--HHHTTCSEEEECSS
T ss_pred HHH--H--HHHHCCCEEEEcCc
Confidence 111 1 22477899999874
No 334
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=95.16 E-value=0.022 Score=58.80 Aligned_cols=53 Identities=11% Similarity=0.040 Sum_probs=45.0
Q ss_pred CCcEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCC
Q 006864 557 EGNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE 609 (628)
Q Consensus 557 ~~~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~ 609 (628)
....|.+.-+|+||+|++|++.|+++|+||.+++-.-+...|.-.|.++++-+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 61 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHAT 61 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEcc
Confidence 34567778899999999999999999999999998866667788888887654
No 335
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.15 E-value=0.018 Score=60.84 Aligned_cols=85 Identities=18% Similarity=0.138 Sum_probs=50.8
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCC-CEEEEE--CCCCC-hhHHHHcC---------------CcccCHHHHhc-cCCEEE
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLG-MNVIAH--DPYAP-ADKARAVG---------------VELVSFDQALA-TADFIS 288 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G-~~V~~~--d~~~~-~~~a~~~g---------------~~~~sl~ell~-~aDvV~ 288 (628)
.+|||+| +|.||+.+++.|.... ++|.+. ++... .......+ +...+++++++ .+|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4899999 9999999999998654 687665 33221 11111111 11124556556 899999
Q ss_pred EcCCCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 289 l~~Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
+|+|... ++.. .-..++.|+.+|+.+
T Consensus 89 ~atp~~~-~~~~----a~~~~~aG~~VId~s 114 (354)
T 1ys4_A 89 SALPSDL-AKKF----EPEFAKEGKLIFSNA 114 (354)
T ss_dssp ECCCHHH-HHHH----HHHHHHTTCEEEECC
T ss_pred ECCCchH-HHHH----HHHHHHCCCEEEECC
Confidence 9998332 1111 111235677777765
No 336
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=95.13 E-value=0.012 Score=60.54 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=43.5
Q ss_pred CCcEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCC
Q 006864 557 EGNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDE 608 (628)
Q Consensus 557 ~~~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~ 608 (628)
....|.+.-+|+||+|++|++.|+++|+||.+++...+...|.-.|.+.++-
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~ 56 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNA 56 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEc
Confidence 3456777889999999999999999999999999876666777788777753
No 337
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=95.13 E-value=0.031 Score=57.46 Aligned_cols=103 Identities=19% Similarity=0.296 Sum_probs=67.1
Q ss_pred CCeEEEEec-ChhHHHHHHHHHcCCCEEE-EECCCCChhHHHHcCCccc-CHHHHhc--cCCEEEEcCCCCccccccccH
Q 006864 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVI-AHDPYAPADKARAVGVELV-SFDQALA--TADFISLHMPLNPTTSKIFND 303 (628)
Q Consensus 229 GktiGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~~-sl~ell~--~aDvV~l~~Plt~~t~~li~~ 303 (628)
.++|+|+|. |++|+.+++.++..|++++ ..+|..... ...|+... +++++.+ .+|++++++|- +.+...+ +
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~-~ 82 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM--EVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAA-L 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHH-H
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc--eECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHH-H
Confidence 468999999 9999999999998899854 678764211 12466544 7999998 89999999982 2222222 2
Q ss_pred HHHhcCCCCcE-EEEcCCC-chhcHHHHHHHHhCCCe
Q 006864 304 ETFAKMKKGVR-IVNVARG-GVIDEEALVRALDSGVV 338 (628)
Q Consensus 304 ~~l~~mk~gai-lIN~aRg-~~vde~aL~~aL~~g~i 338 (628)
+.. +.|.- +|..+.| ...+++.+.++.++..+
T Consensus 83 ea~---~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi 116 (288)
T 1oi7_A 83 EAA---HAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 (288)
T ss_dssp HHH---HTTCSEEEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred HHH---HCCCCEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 222 23333 4555544 22345677777766444
No 338
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.12 E-value=0.062 Score=56.57 Aligned_cols=87 Identities=26% Similarity=0.272 Sum_probs=60.0
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCccc--------CHHHHhc-----cCCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV--------SFDQALA-----TADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~--------sl~ell~-----~aDvV~l~~P 292 (628)
.|+++.|+|.|.||...++.++.+|+ +|++.++.. ..+.++++|+..+ ++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 47899999999999999999999999 899998765 3455667775321 2333222 3677777665
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006864 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~g-ailIN~a 319 (628)
..+ + -...++.++++ ..++.++
T Consensus 272 ~~~-~----~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 272 NVG-V----MRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECS
T ss_pred CHH-H----HHHHHHHhhcCCcEEEEEc
Confidence 211 1 24556667777 7777765
No 339
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.12 E-value=0.027 Score=58.93 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=45.4
Q ss_pred eEEEEecChhHHHHHHHHHcC-CCEEEE-ECCCCCh--hHHHHcCCc-------------------ccCHHHHhccCCEE
Q 006864 231 TLAVMGFGKVGSEVARRAKGL-GMNVIA-HDPYAPA--DKARAVGVE-------------------LVSFDQALATADFI 287 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~~--~~a~~~g~~-------------------~~sl~ell~~aDvV 287 (628)
++||+|+|.||+.+++.+... ++++.+ .|+.... ..++..|+. ..++++++.++|+|
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV 83 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII 83 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCEE
Confidence 799999999999999999865 577765 4554321 122333321 12688888899999
Q ss_pred EEcCCCC
Q 006864 288 SLHMPLN 294 (628)
Q Consensus 288 ~l~~Plt 294 (628)
+.|+|-.
T Consensus 84 ~~aTp~~ 90 (334)
T 2czc_A 84 VDATPGG 90 (334)
T ss_dssp EECCSTT
T ss_pred EECCCcc
Confidence 9999843
No 340
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.09 E-value=0.063 Score=55.68 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=62.7
Q ss_pred CeEEEEec-ChhHHHHHHHHHcCC--CEEEEECCCCChhHHHHcC-------Ccc----cCHHHHhccCCEEEEcCCCCc
Q 006864 230 KTLAVMGF-GKVGSEVARRAKGLG--MNVIAHDPYAPADKARAVG-------VEL----VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 230 ktiGIIGl-G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~a~~~g-------~~~----~sl~ell~~aDvV~l~~Plt~ 295 (628)
++|+|||. |.+|+.++..|...| .+|..+|.......+.++. +.. .++++.++.||+|+++.....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 37999998 999999999998777 6899999765222222221 111 257888999999999986432
Q ss_pred c---ccc-c--ccH-------HHHhcCCCCcEEEEcCCCchhcHHH
Q 006864 296 T---TSK-I--FND-------ETFAKMKKGVRIVNVARGGVIDEEA 328 (628)
Q Consensus 296 ~---t~~-l--i~~-------~~l~~mk~gailIN~aRg~~vde~a 328 (628)
. ++. + .|. +.+....|++++++++ ..+|.-.
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s--NPv~~~~ 124 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS--NPVNSTI 124 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CCcchhH
Confidence 1 111 1 011 1222335888999974 5666543
No 341
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.07 E-value=0.033 Score=52.38 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=47.4
Q ss_pred CCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCChhHHH-HcCCcc--------cCHHHHhccCCEEEEcCCCC
Q 006864 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPADKAR-AVGVEL--------VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 229 GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~-~~g~~~--------~sl~ell~~aDvV~l~~Plt 294 (628)
+|++.|.|. |.||+.+++.|...|.+|++.++........ ..++.. .++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 478999997 9999999999999999999998764221100 112221 13667788899998877643
No 342
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.04 E-value=0.03 Score=60.27 Aligned_cols=65 Identities=15% Similarity=0.268 Sum_probs=48.7
Q ss_pred CeEEEEecCh---hHHHHHHHHHcCC-CEEE--EECCCCC--hhHHHHcCCc----ccCHHHHhcc-------CCEEEEc
Q 006864 230 KTLAVMGFGK---VGSEVARRAKGLG-MNVI--AHDPYAP--ADKARAVGVE----LVSFDQALAT-------ADFISLH 290 (628)
Q Consensus 230 ktiGIIGlG~---IG~~vA~~l~~~G-~~V~--~~d~~~~--~~~a~~~g~~----~~sl~ell~~-------aDvV~l~ 290 (628)
.+|||||+|. ||+..+..++..+ ++++ ++|+... ...+++.|+. +.++++++++ .|+|+++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~ 117 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIV 117 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEEC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEEC
Confidence 4899999999 9999988887665 6776 4687652 2334566773 3489999986 9999999
Q ss_pred CCCC
Q 006864 291 MPLN 294 (628)
Q Consensus 291 ~Plt 294 (628)
+|-.
T Consensus 118 tp~~ 121 (417)
T 3v5n_A 118 TPNH 121 (417)
T ss_dssp SCTT
T ss_pred CCcH
Confidence 9943
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.03 E-value=0.025 Score=58.78 Aligned_cols=88 Identities=23% Similarity=0.361 Sum_probs=59.0
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHh----ccCCEEEEcCCCCcc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV------SFDQAL----ATADFISLHMPLNPT 296 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------sl~ell----~~aDvV~l~~Plt~~ 296 (628)
.|+++.|+|.|.||..+++.++.+|++|++.++.. ..+.++++|+..+ ++.+.+ ...|+|+-++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~- 242 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP- 242 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH-
Confidence 47899999999999999999999999999999764 2344556665321 222211 34677777664211
Q ss_pred ccccccHHHHhcCCCCcEEEEcCC
Q 006864 297 TSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 297 t~~li~~~~l~~mk~gailIN~aR 320 (628)
+ -...++.|+++..++.++.
T Consensus 243 ~----~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 243 A----FQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp H----HHHHHHHEEEEEEEEECCC
T ss_pred H----HHHHHHHhhcCCEEEEecc
Confidence 1 2445566777777777764
No 344
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.02 E-value=0.065 Score=56.36 Aligned_cols=87 Identities=28% Similarity=0.272 Sum_probs=57.6
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCcc-cC-------HHHHhc-----cCCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVEL-VS-------FDQALA-----TADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~-~s-------l~ell~-----~aDvV~l~~P 292 (628)
.|+++.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|+.. ++ +.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 47899999999999999999999999 899998765 345566677532 11 222222 3577766654
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006864 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~g-ailIN~a 319 (628)
.. ++ -...++.++++ ..++.++
T Consensus 271 ~~-~~----~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 271 RL-DT----MVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp CH-HH----HHHHHHHBCTTTCEEEECS
T ss_pred CH-HH----HHHHHHHhhcCCcEEEEec
Confidence 21 11 13445566666 6666665
No 345
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=94.98 E-value=0.025 Score=59.01 Aligned_cols=63 Identities=21% Similarity=0.310 Sum_probs=48.0
Q ss_pred CeEEEEecC-hhHHHHHHHHHcC--CCEEE-EECCCCCh--hHHHHcCC-c-ccCHHHHhc--cCCEEEEcCC
Q 006864 230 KTLAVMGFG-KVGSEVARRAKGL--GMNVI-AHDPYAPA--DKARAVGV-E-LVSFDQALA--TADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG-~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~g~-~-~~sl~ell~--~aDvV~l~~P 292 (628)
.++||||+| .+|+..+..++.. ++++. ++|+.... ..++..++ . +.+++++++ +.|+|++++|
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLP 91 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCC
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 479999999 8999999999876 57775 57876422 23345565 3 348999996 5899999998
No 346
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.97 E-value=0.0083 Score=62.98 Aligned_cols=92 Identities=12% Similarity=0.045 Sum_probs=60.5
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhHH------HHcC------Ccc-cCHHHHhccCCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADKA------RAVG------VEL-VSFDQALATADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a------~~~g------~~~-~sl~ell~~aDvV~l~~P 292 (628)
..++|+|||.|.||..+|..+...|+ +|..+|........ .... +.. .++++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999987776 99999985421111 1000 111 15655 899999999865
Q ss_pred CCc---ccc-ccc--cH-------HHHhcCCCCcEEEEcCC
Q 006864 293 LNP---TTS-KIF--ND-------ETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 293 lt~---~t~-~li--~~-------~~l~~mk~gailIN~aR 320 (628)
... +++ .++ |. +.+....|++++++++-
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 322 122 122 11 23444588999999974
No 347
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.96 E-value=0.099 Score=56.52 Aligned_cols=107 Identities=25% Similarity=0.267 Sum_probs=66.0
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEE-EC-------CCC-ChhHHHHcC----C------------ccc-CH
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA-HD-------PYA-PADKARAVG----V------------ELV-SF 277 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~-~d-------~~~-~~~~a~~~g----~------------~~~-sl 277 (628)
|.++.|+++.|.|+|++|+.+|+.|..+|++|++ .| |.- +.+...+.. . +.+ +-
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 5579999999999999999999999999999984 34 331 222111111 0 222 33
Q ss_pred HHHhc-cCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 278 DQALA-TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 278 ~ell~-~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
++++. .||+++-|. +.+.|+.+....++ -.+|+--|-+.+ ..++- +.|.+..|
T Consensus 285 ~~~~~~~~Dil~P~A-----~~~~I~~~~a~~l~-ak~V~EgAN~p~-t~~a~-~~l~~~Gi 338 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAA-----IENVIRGDNAGLVK-ARLVVEGANGPT-TPEAE-RILYERGV 338 (421)
T ss_dssp TGGGGCCCSEEEECS-----CSSCBCTTTTTTCC-CSEEECCSSSCB-CHHHH-HHHHTTTC
T ss_pred hhhhcCCccEEEecC-----cCCccchhhHHHcC-ceEEEecCCCcC-CHHHH-HHHHHCCC
Confidence 45554 688887766 24455555555553 346666666665 34443 34444433
No 348
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=94.94 E-value=0.02 Score=59.35 Aligned_cols=111 Identities=17% Similarity=0.107 Sum_probs=66.1
Q ss_pred CeEEEEecChhHHHHHHHHHcCC--CEEEEECCCCChhH--HHHc--------CCcc-cCHHHHhccCCEEEEcCCCCcc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLG--MNVIAHDPYAPADK--ARAV--------GVEL-VSFDQALATADFISLHMPLNPT 296 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~~~--a~~~--------g~~~-~sl~ell~~aDvV~l~~Plt~~ 296 (628)
++|+|||.|.+|.+++..+...+ -++..+|....... +.++ .+.. .+-.+.++.||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 48999999999999999998666 58999998632111 1111 1111 1336779999999999875432
Q ss_pred cccc-------ccH-------HHHhcCCCCcEEEEcCCCchhcHHHHHHH--HhCCCeeEE
Q 006864 297 TSKI-------FND-------ETFAKMKKGVRIVNVARGGVIDEEALVRA--LDSGVVAQA 341 (628)
Q Consensus 297 t~~l-------i~~-------~~l~~mk~gailIN~aRg~~vde~aL~~a--L~~g~i~ga 341 (628)
.++ .|. +.+....|.+++++++-.-=+....+.+. +...++.|.
T Consensus 81 -~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 140 (310)
T 2xxj_A 81 -PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPPGRVVGS 140 (310)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred -CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCCHHHEEec
Confidence 222 111 12233478899999853222233333333 333355554
No 349
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=94.91 E-value=0.03 Score=58.34 Aligned_cols=59 Identities=24% Similarity=0.355 Sum_probs=46.0
Q ss_pred CCeEEEEecChhHH-HHHHHHHcC-CCEEEE-ECCCCChhHHHHcCCc-ccCHHHHhcc---CCEEEEcCC
Q 006864 229 GKTLAVMGFGKVGS-EVARRAKGL-GMNVIA-HDPYAPADKARAVGVE-LVSFDQALAT---ADFISLHMP 292 (628)
Q Consensus 229 GktiGIIGlG~IG~-~vA~~l~~~-G~~V~~-~d~~~~~~~a~~~g~~-~~sl~ell~~---aDvV~l~~P 292 (628)
-.++||||+|.||+ ..++.++.. +++|.+ +|+... ..|+. +.++++++++ .|+|++++|
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~-----~~g~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT-----VEGVNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC-----CTTSEEESSHHHHHHHCTTCCEEEECSC
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh-----hcCCCccCCHHHHHhCCCCCCEEEEeCC
Confidence 35899999999999 688888876 678765 677642 13554 3489999876 999999998
No 350
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.91 E-value=0.033 Score=60.11 Aligned_cols=64 Identities=19% Similarity=0.270 Sum_probs=47.2
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcC----Cccc---CHHHHhccCCEEEE
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVG----VELV---SFDQALATADFISL 289 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g----~~~~---sl~ell~~aDvV~l 289 (628)
-+.||+|+|+|-|.+|+.+++.++.+|++|+++|++.......-.. ..+. .+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 4679999999999999999999999999999999875322111111 1111 25667788999973
No 351
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=94.91 E-value=0.035 Score=58.52 Aligned_cols=64 Identities=9% Similarity=0.080 Sum_probs=47.6
Q ss_pred CCeEEEEecChhHH-HHHHHHHcCCCEEEE-ECCCCCh--hHHHHcCC-c-ccCHHHHhcc--CCEEEEcCC
Q 006864 229 GKTLAVMGFGKVGS-EVARRAKGLGMNVIA-HDPYAPA--DKARAVGV-E-LVSFDQALAT--ADFISLHMP 292 (628)
Q Consensus 229 GktiGIIGlG~IG~-~vA~~l~~~G~~V~~-~d~~~~~--~~a~~~g~-~-~~sl~ell~~--aDvV~l~~P 292 (628)
-.+|||||+|.+|. .++..++.-++++.+ +|+.... ..+++.+. . +.++++++++ .|+|++++|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 35899999999995 567777777899764 6876422 23445553 3 3589999985 899999998
No 352
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=94.88 E-value=0.012 Score=57.80 Aligned_cols=63 Identities=17% Similarity=0.211 Sum_probs=43.3
Q ss_pred CeEEEEecChhHHHHHHH--HHcCCCEEEEE-CCCCChhHHHHcCCc---ccCHHHHhc-cCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARR--AKGLGMNVIAH-DPYAPADKARAVGVE---LVSFDQALA-TADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~--l~~~G~~V~~~-d~~~~~~~a~~~g~~---~~sl~ell~-~aDvV~l~~Pl 293 (628)
++++|||.|.+|+.+++. ... |+++.++ |...........|+. ..+++++++ +.|.|++++|.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps 150 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPR 150 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCH
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCc
Confidence 579999999999999995 335 8887764 654322111112322 347888887 59999999993
No 353
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.88 E-value=0.021 Score=59.55 Aligned_cols=45 Identities=31% Similarity=0.437 Sum_probs=37.4
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+|.|.||..+++.++.+|+ +|++.++.. ..+.++++|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga 213 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA 213 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence 68999999999999999999999999 999999864 2234455564
No 354
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.87 E-value=0.039 Score=59.85 Aligned_cols=63 Identities=16% Similarity=0.274 Sum_probs=46.8
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEE-EECCCCCh-hHH-H---HcC---Cc-cc----CHHHHhc--cCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA-DKA-R---AVG---VE-LV----SFDQALA--TADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~-~~a-~---~~g---~~-~~----sl~ell~--~aDvV~l~~P 292 (628)
.+|||||+|.||+..++.++.. ++++. ++|+.... +.+ + +.| .. +. +++++++ +.|+|++++|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 4899999999999999999875 67865 57876422 111 1 234 23 34 8999997 5899999999
No 355
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.87 E-value=0.064 Score=56.43 Aligned_cols=87 Identities=21% Similarity=0.183 Sum_probs=59.7
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCccc--------CHHHHhc-----cCCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV--------SFDQALA-----TADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~--------sl~ell~-----~aDvV~l~~P 292 (628)
.|.++.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|+..+ ++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 47899999999999999999999999 899998765 3455677776421 1322222 3677777664
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006864 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~g-ailIN~a 319 (628)
.. ++ -...++.++++ ..++.++
T Consensus 271 ~~-~~----~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 271 RI-ET----MMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECC
T ss_pred CH-HH----HHHHHHHHhcCCCEEEEEc
Confidence 21 11 24456667777 7777765
No 356
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.87 E-value=0.029 Score=59.26 Aligned_cols=88 Identities=24% Similarity=0.350 Sum_probs=62.5
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc----C---HHHHhccCCEEEEcCCCCccccc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV----S---FDQALATADFISLHMPLNPTTSK 299 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~----s---l~ell~~aDvV~l~~Plt~~t~~ 299 (628)
.|.++.|+|.|.||...++.++.+|++|++.++.. ..+.++++|+..+ + ++++....|+|+-++.... +
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~-~-- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPH-N-- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCC-C--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHH-H--
Confidence 47899999999999999999999999999998764 3455667776422 1 2223345788887775321 1
Q ss_pred cccHHHHhcCCCCcEEEEcCC
Q 006864 300 IFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~aR 320 (628)
-...++.|+++..++.++.
T Consensus 271 --~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 271 --LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp --HHHHHTTEEEEEEEEECCC
T ss_pred --HHHHHHHhccCCEEEEecc
Confidence 2455677788888888764
No 357
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.86 E-value=0.023 Score=62.07 Aligned_cols=67 Identities=16% Similarity=0.072 Sum_probs=47.7
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHH---cCCccc--CH-HHHhccCCEEEEc
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARA---VGVELV--SF-DQALATADFISLH 290 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~---~g~~~~--sl-~ell~~aDvV~l~ 290 (628)
..++.||++.|||.|.+|...++.|...|.+|.++|+....+...- .+++.. .+ ++.+..+|+|+.+
T Consensus 7 ~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~a 79 (457)
T 1pjq_A 7 FCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAA 79 (457)
T ss_dssp EECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEEC
T ss_pred EEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEc
Confidence 4578999999999999999999999999999999999765432211 123221 11 2344567776653
No 358
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.85 E-value=0.08 Score=55.74 Aligned_cols=87 Identities=24% Similarity=0.202 Sum_probs=58.4
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCccc--------CHHHHhc-----cCCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV--------SFDQALA-----TADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~--------sl~ell~-----~aDvV~l~~P 292 (628)
.|.++.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|+..+ ++.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 47899999999999999999999999 899998765 3455667775321 1222221 3677776654
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006864 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~g-ailIN~a 319 (628)
.. ++ -...++.++++ ..++.++
T Consensus 275 ~~-~~----~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 275 TA-QT----LKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECC
T ss_pred CH-HH----HHHHHHHhhcCCCEEEEEC
Confidence 21 11 13455666776 6666665
No 359
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.83 E-value=0.049 Score=58.15 Aligned_cols=88 Identities=18% Similarity=0.225 Sum_probs=57.6
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCccc------CHHH----Hhc--cCCEEEEcCCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV------SFDQ----ALA--TADFISLHMPL 293 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~------sl~e----ll~--~aDvV~l~~Pl 293 (628)
.|.++.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|+..+ ++.+ +.. ..|+|+-++..
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 999998765 3355667776421 2222 111 36777766652
Q ss_pred CccccccccHHHHhcC----CCCcEEEEcC
Q 006864 294 NPTTSKIFNDETFAKM----KKGVRIVNVA 319 (628)
Q Consensus 294 t~~t~~li~~~~l~~m----k~gailIN~a 319 (628)
...+ -...++.+ +++..++.++
T Consensus 293 ~~~~----~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 293 PQLV----WPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp HHHH----HHHHHHHHHHCSCCCCEEEECS
T ss_pred cHHH----HHHHHHHHHhccCCCcEEEEeC
Confidence 2111 12223334 7777777765
No 360
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.83 E-value=0.13 Score=56.21 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=31.6
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEE
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA 257 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~ 257 (628)
|.++.|+|+.|-|+|++|+..|+.|..+|.+|++
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVa 280 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLT 280 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECE
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 5678999999999999999999999999999984
No 361
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.83 E-value=0.033 Score=58.95 Aligned_cols=95 Identities=19% Similarity=0.173 Sum_probs=59.2
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCC------CEEEEEC-CC-CChhHH---------HHcCCcccCHHHHhccCCEEEEcC
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLG------MNVIAHD-PY-APADKA---------RAVGVELVSFDQALATADFISLHM 291 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G------~~V~~~d-~~-~~~~~a---------~~~g~~~~sl~ell~~aDvV~l~~ 291 (628)
++|+|+| .|.+|+.+.++|...+ .++..+. +. ...... ....+...+. +.+..+|+|++|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEECC
Confidence 5899999 9999999999998766 4776653 22 111110 0111111243 3456899999999
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHH
Q 006864 292 PLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVR 331 (628)
Q Consensus 292 Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~ 331 (628)
|-.. ..+....++.|+.+|+.+..--.+..+.++
T Consensus 89 g~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~~~ 122 (352)
T 2nqt_A 89 PHGH------SAVLAQQLSPETLIIDCGADFRLTDAAVWE 122 (352)
T ss_dssp TTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHHHH
T ss_pred CCcc------hHHHHHHHhCCCEEEEECCCccCCcchhhh
Confidence 9543 344444456789999997554444334443
No 362
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.81 E-value=0.05 Score=56.32 Aligned_cols=92 Identities=15% Similarity=0.224 Sum_probs=59.1
Q ss_pred eEEEEecChhHHHHHHHHHcCCC-EEEEECCCCChhHH--HH-------c--C--Ccc-cCHHHHhccCCEEEEcCCCCc
Q 006864 231 TLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKA--RA-------V--G--VEL-VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a--~~-------~--g--~~~-~sl~ell~~aDvV~l~~Plt~ 295 (628)
+|+|||.|.+|..+|..+...|+ +|..+|........ .+ . . +.. .+. +.++.||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999999876676 79999987532111 11 1 2 122 244 67999999999977543
Q ss_pred cccccc-------c----H---HHHhcCCCCcEEEEcCCCchhcH
Q 006864 296 TTSKIF-------N----D---ETFAKMKKGVRIVNVARGGVIDE 326 (628)
Q Consensus 296 ~t~~li-------~----~---~~l~~mk~gailIN~aRg~~vde 326 (628)
..++- | + +.+....|++++|+++- .+|.
T Consensus 80 -k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN--Pv~~ 121 (308)
T 2d4a_B 80 -KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN--PVDA 121 (308)
T ss_dssp -CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC--chHH
Confidence 22221 1 1 12333358899999853 4443
No 363
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.81 E-value=0.027 Score=54.27 Aligned_cols=65 Identities=20% Similarity=0.158 Sum_probs=46.7
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCc-----c---cCHHHHhccCCEEEEcCCCC
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE-----L---VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~-----~---~sl~ell~~aDvV~l~~Plt 294 (628)
++|.|.| .|.||+.+++.|...|++|++.++..........+++ . .+++++++.+|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 6899998 6999999999999999999999987422111001221 1 13677889999998876543
No 364
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.80 E-value=0.26 Score=53.27 Aligned_cols=107 Identities=26% Similarity=0.374 Sum_probs=70.5
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEE--------ECCCC-ChhHH----HHcC-Cc--ccCHHHHhc-cCCE
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA--------HDPYA-PADKA----RAVG-VE--LVSFDQALA-TADF 286 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~a----~~~g-~~--~~sl~ell~-~aDv 286 (628)
|.++.||++.|.|+|++|+.+|+.|...|++|++ |||.- +.+.. .+.+ +. ..+-++++. .||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 4578999999999999999999999999999983 34432 22211 1122 11 122244443 7999
Q ss_pred EEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 287 V~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
++-|.. .+.|+.+.-..++ -.+|+..|-+.+- .+|- +.|.+..|
T Consensus 293 liP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~t-~~A~-~~L~~~Gi 336 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGLN-PEAE-AYLLGKGA 336 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCBC-HHHH-HHHHHHTC
T ss_pred EEeccc-----ccccccchHhhCC-ceEEEECCCCcCC-HHHH-HHHHHCCC
Confidence 988863 4566777777774 3588888888864 4443 44444433
No 365
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.79 E-value=0.067 Score=56.22 Aligned_cols=87 Identities=23% Similarity=0.240 Sum_probs=59.4
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCccc--------CHHHHhc-----cCCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV--------SFDQALA-----TADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~--------sl~ell~-----~aDvV~l~~P 292 (628)
.|.++.|+|.|.||...++.++.+|+ +|++.++.. ..+.++++|+..+ ++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 47899999999999999999999999 899998765 3455666775321 1322222 3677777665
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006864 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~g-ailIN~a 319 (628)
..+ + -...++.++++ ..++.++
T Consensus 270 ~~~-~----~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 270 NVK-V----MRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECS
T ss_pred cHH-H----HHHHHHhhccCCcEEEEEe
Confidence 211 1 24456667777 7777765
No 366
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=94.79 E-value=0.097 Score=56.46 Aligned_cols=64 Identities=28% Similarity=0.371 Sum_probs=49.8
Q ss_pred ecCCeEEEEe-----cCh---hHHHHHHHHHcCCCEEEEECCCC---ChhH-------HHHcCC--cc-cCHHHHhccCC
Q 006864 227 LVGKTLAVMG-----FGK---VGSEVARRAKGLGMNVIAHDPYA---PADK-------ARAVGV--EL-VSFDQALATAD 285 (628)
Q Consensus 227 l~GktiGIIG-----lG~---IG~~vA~~l~~~G~~V~~~d~~~---~~~~-------a~~~g~--~~-~sl~ell~~aD 285 (628)
+.|++|+|+| +|+ +..+++..+..|||+|.+..|.. .++. +++.|. .. .+++++++.||
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 7899999998 454 99999999999999999998853 2221 223564 32 37999999999
Q ss_pred EEEEc
Q 006864 286 FISLH 290 (628)
Q Consensus 286 vV~l~ 290 (628)
+|..-
T Consensus 266 VVytd 270 (418)
T 2yfk_A 266 VVYPK 270 (418)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99984
No 367
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=94.78 E-value=0.042 Score=56.45 Aligned_cols=53 Identities=9% Similarity=-0.001 Sum_probs=44.8
Q ss_pred CCcEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCC
Q 006864 557 EGNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE 609 (628)
Q Consensus 557 ~~~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~ 609 (628)
....|.+.-+|+||+|++|++.|+++|+||.+++-.-+...|.-.|.+.++-+
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 59 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP 59 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC
Confidence 34567778899999999999999999999999998866667777888888653
No 368
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=94.75 E-value=0.067 Score=56.27 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=32.7
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCC
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPY 261 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~ 261 (628)
..|++++|.|||.|.+|..+|+.|...|. ++..+|+.
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46899999999999999999999999996 77888753
No 369
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=94.73 E-value=0.1 Score=55.86 Aligned_cols=87 Identities=20% Similarity=0.184 Sum_probs=65.8
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAK 308 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~ 308 (628)
-.++-|+|.|.+|+++++.++.+|++|.++|++.... . .+-+..+|-++...| .+.+..
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~--~---------~~~fp~a~~~~~~~p----------~~~~~~ 262 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA--T---------TARFPTADEVVVDWP----------HRYLAA 262 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS--C---------TTTCSSSSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc--c---------cccCCCceEEEeCCh----------HHHHHh
Confidence 3589999999999999999999999999999875211 0 112355665555444 122222
Q ss_pred ------CCCCcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 309 ------MKKGVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 309 ------mk~gailIN~aRg~~vde~aL~~aL~~g 336 (628)
+.++..+|=..++.-.|...|..+|+.+
T Consensus 263 ~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~ 296 (386)
T 2we8_A 263 QAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLP 296 (386)
T ss_dssp HHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSS
T ss_pred hccccCCCCCcEEEEEECChHhHHHHHHHHhcCC
Confidence 6788899999999999999999999887
No 370
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.70 E-value=0.071 Score=55.76 Aligned_cols=88 Identities=23% Similarity=0.289 Sum_probs=59.7
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCC-hhHHHHcCCccc---C---HH----HHh----ccCCEEEEcC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAP-ADKARAVGVELV---S---FD----QAL----ATADFISLHM 291 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~~~g~~~~---s---l~----ell----~~aDvV~l~~ 291 (628)
.|.++.|+|.|.+|...++.++.+|. +|++.|+... .+.++++|+..+ + -+ ++. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 9999987642 345667776321 1 11 111 2378887766
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCC
Q 006864 292 PLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 292 Plt~~t~~li~~~~l~~mk~gailIN~aR 320 (628)
.... + -...++.++++..++.++-
T Consensus 251 g~~~-~----~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GAEA-S----IQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCHH-H----HHHHHHHSCTTCEEEECSC
T ss_pred CChH-H----HHHHHHHhcCCCEEEEEec
Confidence 5211 1 1345666777777777753
No 371
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=94.70 E-value=0.019 Score=60.11 Aligned_cols=63 Identities=11% Similarity=0.208 Sum_probs=45.8
Q ss_pred CeEEEEecChhHHHHHHHHHcC--------CCEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL--------GMNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~--------G~~V~~-~d~~~~--~~~a~~~g~~--~~sl~ell~--~aDvV~l~~P 292 (628)
-+|||||+|.||+.-++.++.. +.+|.+ +|+... ...+++.|+. +.+++++++ +.|+|++++|
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP 84 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTP 84 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSC
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 3799999999999888777643 236554 687642 2334566764 348999996 4899999999
No 372
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=94.68 E-value=0.23 Score=51.40 Aligned_cols=65 Identities=17% Similarity=0.263 Sum_probs=51.6
Q ss_pred eecCCeEEEEec---ChhHHHHHHHHHcC-CCEEEEECCCC---Chh---HHHHcCCcc---cCHHHHhccCCEEEEc
Q 006864 226 SLVGKTLAVMGF---GKVGSEVARRAKGL-GMNVIAHDPYA---PAD---KARAVGVEL---VSFDQALATADFISLH 290 (628)
Q Consensus 226 ~l~GktiGIIGl---G~IG~~vA~~l~~~-G~~V~~~d~~~---~~~---~a~~~g~~~---~sl~ell~~aDvV~l~ 290 (628)
.+.|++|++||= |++..+.+..+..| |++|.+..|.. +.+ .+++.|... .++++.++.||+|..-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~ 225 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVT 225 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEEC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeC
Confidence 378999999998 58999999999999 99999988742 222 234556543 3899999999999874
No 373
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=94.67 E-value=0.035 Score=58.43 Aligned_cols=36 Identities=33% Similarity=0.683 Sum_probs=31.6
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEE-ECCCCChh
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPYAPAD 265 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~~ 265 (628)
.++||.|||+||+.+++++..+|++|++ +||+.+.+
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~~ 44 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPE 44 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCHH
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCChh
Confidence 4899999999999999999999999888 78876544
No 374
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.67 E-value=0.064 Score=58.43 Aligned_cols=34 Identities=38% Similarity=0.636 Sum_probs=31.9
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEE
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA 257 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~ 257 (628)
|.++.|+++.|.|+|++|+.+|+.|...|.+|++
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVa 258 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVT 258 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 5678999999999999999999999999999986
No 375
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=94.66 E-value=0.021 Score=58.45 Aligned_cols=60 Identities=23% Similarity=0.246 Sum_probs=45.6
Q ss_pred CeEEEEecChhHHHHHHHHHc----CCCEEEE-ECCCCChhHHHHcCCcccCHHHHhc--cCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKG----LGMNVIA-HDPYAPADKARAVGVELVSFDQALA--TADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~----~G~~V~~-~d~~~~~~~a~~~g~~~~sl~ell~--~aDvV~l~~P 292 (628)
.+|||||+|.||+..++.+.. -++++.+ +|+... +...|+...+++++++ +.|+|++++|
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~---a~~~g~~~~~~~ell~~~~vD~V~i~tp 74 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL---GSLDEVRQISLEDALRSQEIDVAYICSE 74 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC---CEETTEEBCCHHHHHHCSSEEEEEECSC
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH---HHHcCCCCCCHHHHhcCCCCCEEEEeCC
Confidence 379999999999999988865 3577664 676431 2234555568999997 6899999998
No 376
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.64 E-value=0.019 Score=54.54 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.7
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.|+++.|+| .|.||+.+++.++..|++|++.++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578999999 69999999999999999999998753
No 377
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.64 E-value=0.02 Score=55.16 Aligned_cols=64 Identities=11% Similarity=0.123 Sum_probs=44.3
Q ss_pred CeEEEEe-cChhHHHHHHHHH-cCCCEEEEECCCCC-hhHH---HHcCCcc--------cCHHHHhccCCEEEEcCCC
Q 006864 230 KTLAVMG-FGKVGSEVARRAK-GLGMNVIAHDPYAP-ADKA---RAVGVEL--------VSFDQALATADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~-~~G~~V~~~d~~~~-~~~a---~~~g~~~--------~sl~ell~~aDvV~l~~Pl 293 (628)
|++.|.| .|.||+.+++.|. ..|++|++.++... .... ...++.. .+++++++.+|+|+.++..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 6799999 6999999999999 89999999987632 1111 1111211 1356677788888777653
No 378
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=94.63 E-value=0.019 Score=59.50 Aligned_cols=55 Identities=18% Similarity=0.093 Sum_probs=45.2
Q ss_pred eecCCc-EEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCC
Q 006864 554 ASLEGN-LILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDE 608 (628)
Q Consensus 554 ~~~~~~-~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~ 608 (628)
|.|... .|.+.-+|+||+|++|++.|+++|+||.+++..-....|.-.|.++++-
T Consensus 17 ~~~~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~ 72 (302)
T 3o1l_A 17 FQGMRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRA 72 (302)
T ss_dssp TCCCCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEG
T ss_pred ecccceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEec
Confidence 344443 5666779999999999999999999999999886656788888888875
No 379
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.61 E-value=0.023 Score=60.59 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=49.2
Q ss_pred CeEEEEecChhHHHHHHHHHcC--CCEEEE-ECCCCC--hhHHHHcCCcc-cCHHHHhccCCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL--GMNVIA-HDPYAP--ADKARAVGVEL-VSFDQALATADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~--G~~V~~-~d~~~~--~~~a~~~g~~~-~sl~ell~~aDvV~l~~Pl 293 (628)
.+|||||.| +|+.-++.++.. ++++.+ +|+... ...+++.|+.. .++++++++.|++++++|.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~ 76 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRS 76 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC-
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCC
Confidence 589999999 799888877765 578775 687752 34466778864 4899999999999999983
No 380
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.59 E-value=0.032 Score=57.93 Aligned_cols=87 Identities=20% Similarity=0.252 Sum_probs=57.7
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHh----ccCCEEEEcCCCCcc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV------SFDQAL----ATADFISLHMPLNPT 296 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------sl~ell----~~aDvV~l~~Plt~~ 296 (628)
.|+++.|+|.|.||...++.++.+|.+|++.|+.. ..+.++++|+..+ ++.+.+ ...|+|+.++... +
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~-~ 244 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSP-K 244 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCH-H
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCH-H
Confidence 47899999999999999999999999999998764 3345666775321 222222 1456666655411 1
Q ss_pred ccccccHHHHhcCCCCcEEEEcC
Q 006864 297 TSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 297 t~~li~~~~l~~mk~gailIN~a 319 (628)
+ -...+..++++..++.++
T Consensus 245 ~----~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 245 A----FSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp H----HHHHHHHEEEEEEEEECS
T ss_pred H----HHHHHHHhccCCEEEEeC
Confidence 1 234455666777776665
No 381
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.52 E-value=0.046 Score=57.32 Aligned_cols=94 Identities=13% Similarity=0.193 Sum_probs=60.8
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCC--EEEEECCCCChhH--HHHc--C-----C-cc---cCHHHHhccCCEEEEc
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--ARAV--G-----V-EL---VSFDQALATADFISLH 290 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~--g-----~-~~---~sl~ell~~aDvV~l~ 290 (628)
....++|+|||.|.||..+|..+...|. ++..+|....... +.++ . . .. .+.+ .++.||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 4567899999999999999999887776 8999998642111 1111 1 0 11 1444 58999999998
Q ss_pred CCCCc---cccc-ccc--H-------HHHhcCCCCcEEEEcCC
Q 006864 291 MPLNP---TTSK-IFN--D-------ETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 291 ~Plt~---~t~~-li~--~-------~~l~~mk~gailIN~aR 320 (628)
.-... +|+. ++. . +.+....|++++++++-
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 64322 2232 221 1 23344578999999974
No 382
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.52 E-value=0.04 Score=58.17 Aligned_cols=87 Identities=24% Similarity=0.261 Sum_probs=57.3
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCccc------CHHHHhc--------cCCEEEEcC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV------SFDQALA--------TADFISLHM 291 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~------sl~ell~--------~aDvV~l~~ 291 (628)
.|.++.|+|.|.+|...++.++.+|+ +|++.|+.. ..+.++++|+..+ ++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 47899999999999999999999999 899998764 3345566776421 2333332 256666655
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 292 PLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 292 Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
.. +++ -...+..++++..++.++
T Consensus 262 G~-~~~----~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 262 GV-AET----VKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CC-HHH----HHHHHHHEEEEEEEEECS
T ss_pred CC-HHH----HHHHHHHhccCCEEEEEe
Confidence 31 111 134455566666666665
No 383
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=94.51 E-value=0.12 Score=54.08 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=67.6
Q ss_pred eEEEEecChhHHHHHHHHHc---------CCCEEEE-ECCCCC------hhH--HH--HcCCcc--cCHHHHhc--cCCE
Q 006864 231 TLAVMGFGKVGSEVARRAKG---------LGMNVIA-HDPYAP------ADK--AR--AVGVEL--VSFDQALA--TADF 286 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~---------~G~~V~~-~d~~~~------~~~--a~--~~g~~~--~sl~ell~--~aDv 286 (628)
+|||||+|.||+.+++.++. .+.+|.+ +|+... ... .. ..+... .++++++. +.|+
T Consensus 4 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iDv 83 (327)
T 3do5_A 4 KIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYDV 83 (327)
T ss_dssp EEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCSE
T ss_pred EEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCCE
Confidence 79999999999999999975 4677766 466531 111 11 112222 28999986 5899
Q ss_pred EEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchh-cHHHHHHHHhCCCe
Q 006864 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI-DEEALVRALDSGVV 338 (628)
Q Consensus 287 V~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~v-de~aL~~aL~~g~i 338 (628)
|+.++|-...+.. .-.-....|+.|.-++-..-+.+. ..+.|.++.++...
T Consensus 84 Vv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~ 135 (327)
T 3do5_A 84 LIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGV 135 (327)
T ss_dssp EEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCC
Confidence 9999995432111 123345568888888877544443 56677776665543
No 384
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=94.47 E-value=0.13 Score=55.85 Aligned_cols=36 Identities=25% Similarity=0.261 Sum_probs=32.1
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEE-EEC
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVI-AHD 259 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~-~~d 259 (628)
|.++.|+|+.|-|+|++|+..|+.|...|++|+ +.|
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 457999999999999999999999999999987 444
No 385
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.45 E-value=0.013 Score=59.87 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=36.7
Q ss_pred eeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC
Q 006864 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP 263 (628)
Q Consensus 224 g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~ 263 (628)
..++.||++.|||.|.+|...++.|...|++|.+++|...
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4678999999999999999999999999999999998653
No 386
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.42 E-value=0.051 Score=57.05 Aligned_cols=87 Identities=21% Similarity=0.329 Sum_probs=53.5
Q ss_pred CeEEEEecChhHHHHHHHHHc-CCCEEEEE-CCCCChhHHH---Hc----C-------------------Ccc---cCHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKG-LGMNVIAH-DPYAPADKAR---AV----G-------------------VEL---VSFD 278 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~~~a~---~~----g-------------------~~~---~sl~ 278 (628)
.+|||+|+|+||+.+++.+.. -+++|.+. |+....+... +. | +.. .+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 489999999999999999865 46888765 5422232211 10 0 000 1455
Q ss_pred HH-h--ccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006864 279 QA-L--ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 279 el-l--~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 321 (628)
++ + ..+|+|+.|+|.... + +..-..++.|+..|.++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~-~----e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTT-M----EKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCS-H----HHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhh-H----HHHHHHHhCCCeEEEeccC
Confidence 55 2 578999999984432 1 2223446778777777644
No 387
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.41 E-value=0.067 Score=51.19 Aligned_cols=64 Identities=20% Similarity=0.239 Sum_probs=45.3
Q ss_pred CeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCChhHH-HHcCCccc--CHH----HHhccCCEEEEcCCC
Q 006864 230 KTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPADKA-RAVGVELV--SFD----QALATADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a-~~~g~~~~--sl~----ell~~aDvV~l~~Pl 293 (628)
++|.|.|. |.||+.+++.|...|++|++.++....... ...+++.+ ++. +.+..+|+|+.++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 46889987 999999999999999999999886422111 11233322 221 677889999887765
No 388
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.41 E-value=0.037 Score=57.97 Aligned_cols=88 Identities=16% Similarity=0.275 Sum_probs=61.0
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHH-HcCCccc----C---HHHHhccCCEEEEcCCCCcccc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKAR-AVGVELV----S---FDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~g~~~~----s---l~ell~~aDvV~l~~Plt~~t~ 298 (628)
.|.++.|+|.|.||...++.++.+|.+|++.++.... +.++ ++|+..+ + +.++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 5789999999999999999999999999999877543 3344 6675422 2 22223356888777653211
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aR 320 (628)
-...++.++++..++.++-
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2445666778878877763
No 389
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.41 E-value=0.027 Score=55.10 Aligned_cols=67 Identities=10% Similarity=0.121 Sum_probs=46.7
Q ss_pred ecCCeEEEEe-cChhHHHHHHHHHcCC-CEEEEECCCCChhHH-HHcCCc-----c---cCHHHHhccCCEEEEcCCC
Q 006864 227 LVGKTLAVMG-FGKVGSEVARRAKGLG-MNVIAHDPYAPADKA-RAVGVE-----L---VSFDQALATADFISLHMPL 293 (628)
Q Consensus 227 l~GktiGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~~~a-~~~g~~-----~---~sl~ell~~aDvV~l~~Pl 293 (628)
...|++.|.| .|.||+.+++.|...| ++|+++++....... ...++. . .+++++++.+|+|+.++..
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 4458999999 7999999999999999 899999876421110 011221 1 1366788889999877653
No 390
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=94.38 E-value=0.49 Score=50.73 Aligned_cols=66 Identities=27% Similarity=0.360 Sum_probs=49.9
Q ss_pred eecCCeEEEEec-----C---hhHHHHHHHHHcCCCEEEEECCCC---ChhH-------HHHcCCc---ccCHHHHhccC
Q 006864 226 SLVGKTLAVMGF-----G---KVGSEVARRAKGLGMNVIAHDPYA---PADK-------ARAVGVE---LVSFDQALATA 284 (628)
Q Consensus 226 ~l~GktiGIIGl-----G---~IG~~vA~~l~~~G~~V~~~d~~~---~~~~-------a~~~g~~---~~sl~ell~~a 284 (628)
.|.|++|+|+|- | ++..+.+..+..|||+|.+..|.. .++. ++..|.. ..++++.++.|
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~a 267 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA 267 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTC
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCC
Confidence 378999999973 4 688999999999999999988752 2221 1244643 23899999999
Q ss_pred CEEEEcC
Q 006864 285 DFISLHM 291 (628)
Q Consensus 285 DvV~l~~ 291 (628)
|+|..-+
T Consensus 268 DvVytd~ 274 (399)
T 3q98_A 268 DIVYPKS 274 (399)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9998743
No 391
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=94.37 E-value=0.069 Score=55.67 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=60.6
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCC--CEEEEECCCCChhHHHHc---CC----cc----cCHHHHhccCCEEEEcCCCCc
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLG--MNVIAHDPYAPADKARAV---GV----EL----VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G--~~V~~~d~~~~~~~a~~~---g~----~~----~sl~ell~~aDvV~l~~Plt~ 295 (628)
++|+|+| .|.+|+.++..|...| .+|..+|.......+.++ .. .. .++.+.++.||+|+++.+...
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~~ 88 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPR 88 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcCC
Confidence 5899999 8999999999998777 789999865432121111 11 11 146788999999999987433
Q ss_pred ccccc-------cc----H---HHHhcCCCCcEEEEcCCCchhcH
Q 006864 296 TTSKI-------FN----D---ETFAKMKKGVRIVNVARGGVIDE 326 (628)
Q Consensus 296 ~t~~l-------i~----~---~~l~~mk~gailIN~aRg~~vde 326 (628)
..++ .| + +.+....+.+++++++ ..+|.
T Consensus 89 -~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 89 -KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNS 130 (326)
T ss_dssp -CSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHH
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHH
Confidence 1221 11 1 1222335778999974 55555
No 392
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=94.37 E-value=0.031 Score=53.91 Aligned_cols=51 Identities=14% Similarity=0.057 Sum_probs=40.0
Q ss_pred CcEEEEeccCCCCchhhHHhhhhcCCccccceEEeeee----cCccEEEEEEeCC
Q 006864 558 GNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTF----RRNHGIMAIGVDE 608 (628)
Q Consensus 558 ~~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~----~gg~Al~~i~vD~ 608 (628)
.+.|.+.-+|+||+++.|+++|+++|+||..++..... ..+.-.|.+.++-
T Consensus 93 ~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~ 147 (195)
T 2nyi_A 93 EYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAF 147 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEE
T ss_pred EEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEc
Confidence 45666677999999999999999999999999987554 3345566666653
No 393
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=94.34 E-value=0.042 Score=56.47 Aligned_cols=51 Identities=16% Similarity=0.163 Sum_probs=44.1
Q ss_pred cEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCC
Q 006864 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE 609 (628)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~ 609 (628)
..|.+.-+|+||+|++|++.|+++|+||.+++...+..+|.=.|.++++-+
T Consensus 8 ~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 58 (287)
T 3nrb_A 8 YVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP 58 (287)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC
Confidence 466677899999999999999999999999999866677888888888754
No 394
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.34 E-value=0.062 Score=55.41 Aligned_cols=111 Identities=13% Similarity=0.082 Sum_probs=65.2
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCCC--EEEEECC--CCChhH--HHHc--------CCccc-CHHHHhccCCEEEEcCCC
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLGM--NVIAHDP--YAPADK--ARAV--------GVELV-SFDQALATADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G~--~V~~~d~--~~~~~~--a~~~--------g~~~~-sl~ell~~aDvV~l~~Pl 293 (628)
++|+|+| .|.+|+.++..|...|. ++..+|. ...... +.++ .+... +-.+.++.||+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4799999 99999999999986665 7888997 421110 1111 00110 225678999999998864
Q ss_pred Cccccccc-------c----H---HHHhcCCCCcEEEEcCCCchhcHHHHHHH--HhCCCeeEE
Q 006864 294 NPTTSKIF-------N----D---ETFAKMKKGVRIVNVARGGVIDEEALVRA--LDSGVVAQA 341 (628)
Q Consensus 294 t~~t~~li-------~----~---~~l~~mk~gailIN~aRg~~vde~aL~~a--L~~g~i~ga 341 (628)
.. ..++- | + +.+....+.+++++++-.-=+....+.+. +...++.|.
T Consensus 81 ~~-~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 81 PR-QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp CC-CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeec
Confidence 32 12210 1 1 22333467899999754322333444444 444467665
No 395
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=94.32 E-value=0.038 Score=52.94 Aligned_cols=48 Identities=13% Similarity=0.149 Sum_probs=38.6
Q ss_pred cEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCC
Q 006864 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDE 608 (628)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~ 608 (628)
..|.+.-+|+||++++|+++|+++|+||...+... .++.-.|.+.++.
T Consensus 7 ~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~--~~~~f~~~~~v~~ 54 (192)
T 1u8s_A 7 LVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM--FGKEFTLLMLISG 54 (192)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTEEEEEEEEEE
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeee--cCCceEEEEEEec
Confidence 45667789999999999999999999999999886 3345555666654
No 396
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.31 E-value=0.087 Score=54.93 Aligned_cols=87 Identities=16% Similarity=0.179 Sum_probs=56.2
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc-------C-HHHH---h-----ccCCEEEEc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-------S-FDQA---L-----ATADFISLH 290 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-------s-l~el---l-----~~aDvV~l~ 290 (628)
.|+++.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|+..+ + .+++ . ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 47899999999999999999999999999998764 2344556665311 1 1122 1 136777666
Q ss_pred CCCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 291 MPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 291 ~Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
+.... + -...+..++++..++.++
T Consensus 248 ~g~~~-~----~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 248 SGNEK-C----ITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCHH-H----HHHHHHHSCTTCEEEECS
T ss_pred CCCHH-H----HHHHHHHHhcCCEEEEEe
Confidence 54211 1 134455666666666665
No 397
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.27 E-value=0.065 Score=54.47 Aligned_cols=38 Identities=29% Similarity=0.307 Sum_probs=34.1
Q ss_pred eeecCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 225 VSLVGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 225 ~~l~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.++.||++.|+| .|.||+++++.|...|++|+++++..
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 346789999999 99999999999999999999998863
No 398
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.26 E-value=0.043 Score=59.82 Aligned_cols=85 Identities=25% Similarity=0.350 Sum_probs=62.0
Q ss_pred eeecCCeEEEEecC---h-------hHHHHHHHHHcCCCEEEEECCCCChhHHHHcC--Cccc-CHHHHhccCCEEEEcC
Q 006864 225 VSLVGKTLAVMGFG---K-------VGSEVARRAKGLGMNVIAHDPYAPADKARAVG--VELV-SFDQALATADFISLHM 291 (628)
Q Consensus 225 ~~l~GktiGIIGlG---~-------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g--~~~~-sl~ell~~aDvV~l~~ 291 (628)
..+.|++|+|+|+. . =...+++.|+..|++|.+|||+...+....++ +..+ ++++++++||.|++++
T Consensus 329 ~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t 408 (444)
T 3vtf_A 329 GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIAT 408 (444)
T ss_dssp TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECS
T ss_pred cccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEcc
Confidence 35899999999986 1 27789999999999999999987443333333 4444 7899999999999998
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEc
Q 006864 292 PLNPTTSKIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 292 Plt~~t~~li~~~~l~~mk~gailIN~ 318 (628)
+-. +-+.+ + + ++.+++|+
T Consensus 409 ~h~-ef~~l-d------~-~~~vv~D~ 426 (444)
T 3vtf_A 409 AWP-QYEGL-D------Y-RGKVVVDG 426 (444)
T ss_dssp CCG-GGGGS-C------C-TTCEEEES
T ss_pred CCH-HHhCC-C------c-CCCEEEEC
Confidence 632 22222 1 2 46788885
No 399
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=94.25 E-value=0.043 Score=56.89 Aligned_cols=106 Identities=19% Similarity=0.233 Sum_probs=71.2
Q ss_pred eecCCeEEEE-ec-ChhHHHHHHHHHcCCCEEE-EECCCCChhHHHHcCCccc-CHHHHhc--cCCEEEEcCCCCccccc
Q 006864 226 SLVGKTLAVM-GF-GKVGSEVARRAKGLGMNVI-AHDPYAPADKARAVGVELV-SFDQALA--TADFISLHMPLNPTTSK 299 (628)
Q Consensus 226 ~l~GktiGII-Gl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~~-sl~ell~--~aDvV~l~~Plt~~t~~ 299 (628)
-+..+++.|| |+ |+.|+.+++.++.+|++++ ..||..... .-.|+... +++|+.+ ..|++++++|-. ....
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~vD~avI~vP~~-~~~~ 86 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGK--THLGLPVFNTVKEAKEQTGATASVIYVPPP-FAAA 86 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcc--eECCeeeechHHHhhhcCCCCEEEEecCHH-HHHH
Confidence 4567899999 99 9999999999999999855 578864111 12466655 7999998 899999999922 2222
Q ss_pred cccHHHHhcCCCCc-EEEEcCCCc-hhcHHHHHHHHhCC-Ce
Q 006864 300 IFNDETFAKMKKGV-RIVNVARGG-VIDEEALVRALDSG-VV 338 (628)
Q Consensus 300 li~~~~l~~mk~ga-ilIN~aRg~-~vde~aL~~aL~~g-~i 338 (628)
.+ ++.++ .|. .+++.+-|- .-++..+.+..++. .+
T Consensus 87 ~~-~e~i~---~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi 124 (305)
T 2fp4_A 87 AI-NEAID---AEVPLVVCITEGIPQQDMVRVKHRLLRQGKT 124 (305)
T ss_dssp HH-HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHTTCSSC
T ss_pred HH-HHHHH---CCCCEEEEECCCCChHHHHHHHHHHHhcCCc
Confidence 22 22232 232 346666663 33455788888776 44
No 400
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=94.22 E-value=0.071 Score=56.39 Aligned_cols=86 Identities=23% Similarity=0.374 Sum_probs=54.4
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEEEE-CCCCChhH-HH--Hc----C-------------------Cccc---CHH
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVIAH-DPYAPADK-AR--AV----G-------------------VELV---SFD 278 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~~~-a~--~~----g-------------------~~~~---sl~ 278 (628)
.+|||+|+|+||+.+.+.|... +++|.+. ||....+. +. +. | +... +.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 97 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPA 97 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChH
Confidence 3899999999999999999866 6888776 44543321 01 00 0 0011 334
Q ss_pred HH-h--ccCCEEEEcCCCCccccccccHHHHhcCCCCc--EEEEcCC
Q 006864 279 QA-L--ATADFISLHMPLNPTTSKIFNDETFAKMKKGV--RIVNVAR 320 (628)
Q Consensus 279 el-l--~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga--ilIN~aR 320 (628)
++ + ..+|+|+.|+|.... + +..-..++.|+ ++|+.+.
T Consensus 98 ~i~w~~~~vDvV~eatg~~~s-~----e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 98 EIPWGASGAQIVCESTGVFTT-E----EKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GCCHHHHTCCEEEECSSSCCS-H----HHHGGGGTTTCSEEEESSCC
T ss_pred HCCcccCCCCEEEECCCchhh-H----HHHHHHHHcCCcEEEEeCCC
Confidence 43 2 479999999985432 1 22223467888 9998863
No 401
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.21 E-value=0.049 Score=57.23 Aligned_cols=45 Identities=31% Similarity=0.347 Sum_probs=37.4
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+|.|.||...++.++.+|++|++.++.. ..+.++++|+
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 234 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA 234 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC
Confidence 47899999999999999999999999999998764 2344555665
No 402
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=94.21 E-value=0.064 Score=58.94 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=71.8
Q ss_pred CCeEEEEecChh-HHHHHHHHHcC-----CCEEEEECCCCChhH-----HH----HcCC----cc-cCHHHHhccCCEEE
Q 006864 229 GKTLAVMGFGKV-GSEVARRAKGL-----GMNVIAHDPYAPADK-----AR----AVGV----EL-VSFDQALATADFIS 288 (628)
Q Consensus 229 GktiGIIGlG~I-G~~vA~~l~~~-----G~~V~~~d~~~~~~~-----a~----~~g~----~~-~sl~ell~~aDvV~ 288 (628)
.++|+|||.|.. |.++|..|... +.+|..||....... .. ..+. .. .++++.++.||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 469999999998 66576555433 668999998642110 01 1111 12 27889999999999
Q ss_pred EcCCCCcc---cc--------c--------------------ccc--HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 289 LHMPLNPT---TS--------K--------------------IFN--DETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 289 l~~Plt~~---t~--------~--------------------li~--~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
+++|.... ++ + ++- .+.+....|+++++|++-.-=+-..++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99986321 11 0 010 123444568999999986655555666665545
Q ss_pred CCeeEEE
Q 006864 336 GVVAQAA 342 (628)
Q Consensus 336 g~i~ga~ 342 (628)
.++.|.+
T Consensus 188 ~rViG~c 194 (472)
T 1u8x_X 188 SKILNIC 194 (472)
T ss_dssp CCEEECC
T ss_pred CCEEEeC
Confidence 5777753
No 403
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.20 E-value=0.053 Score=57.01 Aligned_cols=85 Identities=22% Similarity=0.395 Sum_probs=52.0
Q ss_pred eEEEEecChhHHHHHHHHHcC-CCEEEEE-CCCCChhHH-HH------cCC---------------------ccc---CH
Q 006864 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAH-DPYAPADKA-RA------VGV---------------------ELV---SF 277 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~~~a-~~------~g~---------------------~~~---sl 277 (628)
+|||+|+|+||+.+++.|... +++|.+. |+....+.. .. .|. ... ++
T Consensus 5 kVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~dp 84 (337)
T 3e5r_O 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNP 84 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCSCG
T ss_pred EEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecCCh
Confidence 799999999999999999865 6787765 543222211 10 010 011 44
Q ss_pred HHH-h--ccCCEEEEcCCCCccccccccHHHHhcCCCCc--EEEEcCC
Q 006864 278 DQA-L--ATADFISLHMPLNPTTSKIFNDETFAKMKKGV--RIVNVAR 320 (628)
Q Consensus 278 ~el-l--~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga--ilIN~aR 320 (628)
+++ + ..+|+|+.|+|.... + +..-..++.|+ ++|+...
T Consensus 85 ~~l~w~~~~vDvV~eaTg~~~~-~----e~a~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 85 DEIPWAEAGAEYVVESTGVFTD-K----EKAAAHLKGGAKKVVISAPS 127 (337)
T ss_dssp GGCCHHHHTCSEEEECSSSCCS-H----HHHTHHHHTTCSEEEESSCC
T ss_pred HHccccccCCCEEEECCCchhh-H----HHHHHHHHcCCCEEEEecCC
Confidence 544 2 478999999984432 2 22223356687 8888753
No 404
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.19 E-value=0.026 Score=58.16 Aligned_cols=87 Identities=20% Similarity=0.148 Sum_probs=66.0
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc------C-HHHHhccCCEEEEcCCCCccccc
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV------S-FDQALATADFISLHMPLNPTTSK 299 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~------s-l~ell~~aDvV~l~~Plt~~t~~ 299 (628)
.|.++.|+| .|.+|...++.++.+|++|++.+.....+.++++|+..+ + +.+.+...|+|+-++.. .
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~-----~ 226 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-----D 226 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH-----H
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc-----H
Confidence 478999997 999999999999999999998864433455677787522 3 56666778999887752 1
Q ss_pred cccHHHHhcCCCCcEEEEcCC
Q 006864 300 IFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 300 li~~~~l~~mk~gailIN~aR 320 (628)
.. ...++.++++..++.++.
T Consensus 227 ~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 227 VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp HH-HHHGGGEEEEEEEEECCS
T ss_pred HH-HHHHHhccCCCEEEEeCC
Confidence 12 567788999999998853
No 405
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.13 E-value=0.043 Score=55.90 Aligned_cols=85 Identities=20% Similarity=0.298 Sum_probs=57.5
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc-C------HHHHhccCCEEEEcCCCCcccc
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-S------FDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-s------l~ell~~aDvV~l~~Plt~~t~ 298 (628)
.|+++.|+|. |.||..+++.++.+|++|++.++.. ..+.++++|+..+ + +.+.+...|+|+- +.. +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~--~-- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG--K-- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC--T--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH--H--
Confidence 4789999998 9999999999999999999998754 3344566665421 1 1222245677776 542 1
Q ss_pred ccccHHHHhcCCCCcEEEEcC
Q 006864 299 KIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~a 319 (628)
.-...++.|+++..++.++
T Consensus 200 --~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC-
T ss_pred --HHHHHHHhhccCCEEEEEe
Confidence 1245566677777777765
No 406
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.11 E-value=0.091 Score=55.39 Aligned_cols=87 Identities=24% Similarity=0.313 Sum_probs=56.8
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCccc--------CHHHHhc-----cCCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV--------SFDQALA-----TADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~~~--------sl~ell~-----~aDvV~l~~P 292 (628)
.|.+|.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|+..+ ++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 57899999999999999999999999 899999765 3455666775321 1222221 2566666554
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006864 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (628)
Q Consensus 293 lt~~t~~li~~~~l~~mk~g-ailIN~a 319 (628)
.. ++ -...++.++++ ..++.++
T Consensus 273 ~~-~~----~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 273 NV-SV----MRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECS
T ss_pred CH-HH----HHHHHHHhhccCCEEEEEc
Confidence 21 11 13445556664 6666654
No 407
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.11 E-value=0.052 Score=56.54 Aligned_cols=86 Identities=24% Similarity=0.391 Sum_probs=54.8
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc-----CHHH----Hhc--cCCEEEEcCCCC
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-----SFDQ----ALA--TADFISLHMPLN 294 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-----sl~e----ll~--~aDvV~l~~Plt 294 (628)
.|+++.|+|. |.||...++.++.+|++|++.++.. ..+.++++|...+ ++.+ +.. ..|+|+-++...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 5889999998 9999999999999999999998764 3345555665321 1211 111 356666555421
Q ss_pred ccccccccHHHHhcCCCCcEEEEcC
Q 006864 295 PTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~gailIN~a 319 (628)
.-...+..|+++..++.++
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 1234555566666666654
No 408
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.07 E-value=0.023 Score=55.89 Aligned_cols=64 Identities=14% Similarity=0.230 Sum_probs=44.3
Q ss_pred CeEEEEecChhHHHHHHHH--HcCCCEEEEE-CCCCC-hhHH-HHcCCcc---cCHHHHhcc--CCEEEEcCCC
Q 006864 230 KTLAVMGFGKVGSEVARRA--KGLGMNVIAH-DPYAP-ADKA-RAVGVEL---VSFDQALAT--ADFISLHMPL 293 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l--~~~G~~V~~~-d~~~~-~~~a-~~~g~~~---~sl~ell~~--aDvV~l~~Pl 293 (628)
++++|+|.|++|+.+++.+ ...|+++.++ |.... ..-. .-.|+.. .++++++++ .|.+++++|-
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCG
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCc
Confidence 5799999999999999973 4568998774 65433 2111 1235543 367888874 9999999994
No 409
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.06 E-value=0.041 Score=57.08 Aligned_cols=86 Identities=16% Similarity=0.285 Sum_probs=58.2
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-----C---HHHH-hccCCEEEEcCCCCccccc
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-----S---FDQA-LATADFISLHMPLNPTTSK 299 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-----s---l~el-l~~aDvV~l~~Plt~~t~~ 299 (628)
.+++.|+|+|++|+.+++.|...|. |++.|+........+.++..+ + |+++ +++||.++++++-. ..+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d--~~n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SET 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSH--HHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCcc--HHH
Confidence 5689999999999999999999999 999998753222334555322 2 4444 67899999988732 334
Q ss_pred cccHHHHhcCCCCcEEEE
Q 006864 300 IFNDETFAKMKKGVRIVN 317 (628)
Q Consensus 300 li~~~~l~~mk~gailIN 317 (628)
+.-....+.+.+...++-
T Consensus 192 ~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 192 IHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 444455566666644443
No 410
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.05 E-value=0.033 Score=58.74 Aligned_cols=66 Identities=26% Similarity=0.421 Sum_probs=47.7
Q ss_pred ecCCeEEEEec-ChhHHHHHHHHHcCCC--EEEEECCCCChhHH-----HHc-----CCcc-cCHHHHhccCCEEEEcCC
Q 006864 227 LVGKTLAVMGF-GKVGSEVARRAKGLGM--NVIAHDPYAPADKA-----RAV-----GVEL-VSFDQALATADFISLHMP 292 (628)
Q Consensus 227 l~GktiGIIGl-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a-----~~~-----g~~~-~sl~ell~~aDvV~l~~P 292 (628)
+.+++|+|||. |.+|+.+|..+..+|. +|..+|........ ... .+.. .++.+.++.||+|+++.-
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 34689999998 9999999998887774 89999975321111 111 1122 367888999999999864
No 411
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=93.94 E-value=0.06 Score=55.90 Aligned_cols=63 Identities=16% Similarity=0.253 Sum_probs=46.1
Q ss_pred CeEEEEecChhHHHHHHHHHc--CCCEEE-EECCCCCh---hHHHHcCCcc--cCHHHHhc-----cCCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKG--LGMNVI-AHDPYAPA---DKARAVGVEL--VSFDQALA-----TADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~--~G~~V~-~~d~~~~~---~~a~~~g~~~--~sl~ell~-----~aDvV~l~~P 292 (628)
.++||||+|.||+.+++.+.. -++++. ++|+.... ..++..|+.. .+.+++++ +.|+|+.++|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp 80 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS 80 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC
Confidence 479999999999999999943 467655 46776432 3455667652 35777764 5899999999
No 412
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.92 E-value=0.052 Score=56.62 Aligned_cols=87 Identities=23% Similarity=0.239 Sum_probs=56.4
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCCC-hhHHHHcCCccc------CHHHH----hc--cCCEEEEcCCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAP-ADKARAVGVELV------SFDQA----LA--TADFISLHMPL 293 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~~~g~~~~------sl~el----l~--~aDvV~l~~Pl 293 (628)
.|.++.|+|.|.||...++.++.+|. +|++.|+... .+.++++|+..+ ++.+. .. ..|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 47899999999999999999999999 8999998652 355667775421 22211 11 25666655542
Q ss_pred CccccccccHHHHhcCCCCcEEEEcC
Q 006864 294 NPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 294 t~~t~~li~~~~l~~mk~gailIN~a 319 (628)
.. .-...++.++++..++.++
T Consensus 246 ~~-----~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VH-----TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TT-----HHHHHHHHEEEEEEEEECC
T ss_pred hH-----HHHHHHHHHhcCCEEEEec
Confidence 11 1234455566666666654
No 413
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.81 E-value=0.13 Score=54.01 Aligned_cols=91 Identities=24% Similarity=0.266 Sum_probs=64.8
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc------CHHHHh---ccCCEEEEcCCCCccc
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV------SFDQAL---ATADFISLHMPLNPTT 297 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~------sl~ell---~~aDvV~l~~Plt~~t 297 (628)
.|+++.|+| .|.||...++.++.+|++|++.+.....+.++++|+..+ ++.+.+ ...|+|+-++.....+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~ 262 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTET 262 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhh
Confidence 588999999 799999999999999999998874334455677776432 233322 3589999887633111
Q ss_pred cccccHHHHhcCCCCcEEEEcCCCc
Q 006864 298 SKIFNDETFAKMKKGVRIVNVARGG 322 (628)
Q Consensus 298 ~~li~~~~l~~mk~gailIN~aRg~ 322 (628)
-...+..++++..++.++...
T Consensus 263 ----~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 263 ----WAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp ----HGGGGBCSSSCCEEEESCCSH
T ss_pred ----hHHHHHhhcCCcEEEEeCCCc
Confidence 134566789999999997543
No 414
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.75 E-value=0.073 Score=55.40 Aligned_cols=88 Identities=20% Similarity=0.174 Sum_probs=56.8
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCC-hhHHHHcCCcc-------cCHHHHhc-----cCCEEEEcCCC
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVEL-------VSFDQALA-----TADFISLHMPL 293 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~-------~sl~ell~-----~aDvV~l~~Pl 293 (628)
.|+++.|+|. |.||+.+++.++..|++|++.++... .+.++++|... .++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4789999999 89999999999999999999987653 23445555421 12333322 35676665542
Q ss_pred CccccccccHHHHhcCCCCcEEEEcCC
Q 006864 294 NPTTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 294 t~~t~~li~~~~l~~mk~gailIN~aR 320 (628)
.+ .-...+..|+++..+++++.
T Consensus 249 ~~-----~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 EA-----AIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HH-----HHHHHTTSEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHHhcCCEEEEEeC
Confidence 11 12344555666667776653
No 415
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.73 E-value=0.047 Score=57.09 Aligned_cols=86 Identities=16% Similarity=0.276 Sum_probs=55.4
Q ss_pred cCCeEEEE-ecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHhc-----cCCEEEEcCCCC
Q 006864 228 VGKTLAVM-GFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV------SFDQALA-----TADFISLHMPLN 294 (628)
Q Consensus 228 ~GktiGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------sl~ell~-----~aDvV~l~~Plt 294 (628)
.|+++.|+ |.|.||..+++.++..|++|++.++.. ..+.++++|...+ ++.+.+. ..|+++-++..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 57899999 689999999999999999999998764 2344555564321 2222221 35666665541
Q ss_pred ccccccccHHHHhcCCCCcEEEEcC
Q 006864 295 PTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~gailIN~a 319 (628)
+ .-...+..|+++..++.++
T Consensus 246 -~----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 246 -A----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp -G----GHHHHHHTEEEEEEEEECC
T ss_pred -H----HHHHHHHHhccCCEEEEEE
Confidence 1 1234455566666666654
No 416
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.71 E-value=0.064 Score=53.52 Aligned_cols=64 Identities=19% Similarity=0.241 Sum_probs=47.1
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hHHHHcCCccc-----CHHHHhccCCEEEEcCCCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELV-----SFDQALATADFISLHMPLN 294 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~-----sl~ell~~aDvV~l~~Plt 294 (628)
.++|.|.|.|.||+.+++.|...|++|++.++.... ......+++.+ +++ +..+|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 378999999999999999999999999999887532 22223444322 333 77889988777643
No 417
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.69 E-value=0.049 Score=57.29 Aligned_cols=45 Identities=27% Similarity=0.301 Sum_probs=36.4
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|+
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa 236 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA 236 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence 47899999999999999999999999 799998764 2344555564
No 418
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.63 E-value=0.066 Score=55.76 Aligned_cols=45 Identities=33% Similarity=0.513 Sum_probs=36.6
Q ss_pred cCCeEEEE-ecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVM-GFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+ |.|.||...++.++.+|++|++.++.. ..+.++++|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 196 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA 196 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC
Confidence 68999999 799999999999999999999999854 2334444553
No 419
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.62 E-value=0.085 Score=54.03 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=70.9
Q ss_pred ecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCCCCc----------
Q 006864 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNP---------- 295 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~Plt~---------- 295 (628)
+.|++|.|+|........++.|...|++|..+.-. ..+ ....|.... ++.+.++++|+|++..|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~-~~~-~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a 82 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFD-QLD-HGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFS 82 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCT-TSS-CCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEecc-ccc-cccccceeccchHHHHhcCCEEEeccccccCCcccccccc
Confidence 56889999999999999999999999999877421 111 111233322 46677889999987554321
Q ss_pred cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 296 TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 296 ~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
.+...++++.++.++++.+|+ + ++ |..++.+++.+..+
T Consensus 83 ~~~~~~~~~~l~~~~~l~~i~-~---g~-~~~d~~~~~~~~gi 120 (300)
T 2rir_A 83 NEEVVLKQDHLDRTPAHCVIF-S---GI-SNAYLENIAAQAKR 120 (300)
T ss_dssp SSCEECCHHHHHTSCTTCEEE-E---SS-CCHHHHHHHHHTTC
T ss_pred cCCccchHHHHhhcCCCCEEE-E---ec-CCHHHHHHHHHCCC
Confidence 223347899999999998887 3 33 55664455555444
No 420
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.60 E-value=0.16 Score=53.53 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=61.7
Q ss_pred CeEEEEe-cChhHHH-HH----HHHHcCC-CEE----------EEECCCCCh--hHHHHcCCc--ccCHHHHhcc--CCE
Q 006864 230 KTLAVMG-FGKVGSE-VA----RRAKGLG-MNV----------IAHDPYAPA--DKARAVGVE--LVSFDQALAT--ADF 286 (628)
Q Consensus 230 ktiGIIG-lG~IG~~-vA----~~l~~~G-~~V----------~~~d~~~~~--~~a~~~g~~--~~sl~ell~~--aDv 286 (628)
.+||||| +|.||+. .+ +.++..+ ..+ .++|+.... ..++..|+. +.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4799999 9999998 66 6665443 332 378887532 334566774 3589999975 899
Q ss_pred EEEcCCCCccccccccHHHHhcCCCCcEEEEcCC---CchhcHHHHHHHHhCC
Q 006864 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVAR---GGVIDEEALVRALDSG 336 (628)
Q Consensus 287 V~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR---g~~vde~aL~~aL~~g 336 (628)
|++++|-.. . -+-..+.|+.|.-++ |-- -.+-+.+.|.++.++.
T Consensus 87 V~i~tp~~~--h---~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~ 133 (383)
T 3oqb_A 87 FFDAATTQA--R---PGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSK 133 (383)
T ss_dssp EEECSCSSS--S---HHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHT
T ss_pred EEECCCchH--H---HHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHc
Confidence 999999432 2 122333455555444 321 2333455566555443
No 421
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.54 E-value=0.065 Score=55.70 Aligned_cols=46 Identities=17% Similarity=0.246 Sum_probs=38.1
Q ss_pred cCCeEEEEecChhHHHHHHHHHcC--CCEEEEECCCC-ChhHHHHcCCc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGL--GMNVIAHDPYA-PADKARAVGVE 273 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~-~~~~a~~~g~~ 273 (628)
.|.++.|+|.|.||...++.++.+ |++|++.++.. ..+.++++|+.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 218 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD 218 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC
Confidence 689999999999999999999999 99999999764 33445566653
No 422
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.52 E-value=0.22 Score=54.73 Aligned_cols=104 Identities=21% Similarity=0.297 Sum_probs=67.6
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEE--------ECCCC-ChhHHH----HcC-------CcccCHHHHh-ccC
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA--------HDPYA-PADKAR----AVG-------VELVSFDQAL-ATA 284 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~a~----~~g-------~~~~sl~ell-~~a 284 (628)
++.|+|+.|-|+|++|+..|+.|..+|++|++ |||.- +.+... +.| .+.++ ++++ ..|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-GSILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-SCGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-cccccccc
Confidence 58999999999999999999999999999987 44442 222211 111 11121 1334 468
Q ss_pred CEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 285 DvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
|+.+-|. +.+.|+.+...+++ -.+|+-.|.+. ...+|- +.|.+..|
T Consensus 320 DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p-~T~eA~-~iL~~rGI 365 (501)
T 3mw9_A 320 DILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGP-TTPEAD-KIFLERNI 365 (501)
T ss_dssp SEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSC-BCHHHH-HHHHHTTC
T ss_pred eEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCc-CCHHHH-HHHHHCCC
Confidence 9887765 35677777777775 45777777776 455543 44444333
No 423
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=93.50 E-value=0.12 Score=58.16 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=50.6
Q ss_pred cCceEEcCCCC-ChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccce-eeecCCeEEEEecChhHHHHHHHHHcCC
Q 006864 175 FGCLVVNAPIA-NTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAVMGFGKVGSEVARRAKGLG 252 (628)
Q Consensus 175 ~GI~V~n~p~~-~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~GktiGIIGlG~IG~~vA~~l~~~G 252 (628)
.+-..++-... +....||.+.-+-|-+.| |.--...| ..|++++|.|||+|.+|..+|+.|...|
T Consensus 283 l~~~~~~l~~~~dp~~la~~~~~Lnlklm~-------------wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aG 349 (615)
T 4gsl_A 283 LAPRVVDLSSLLDPLKIADQSVDLNLKLMK-------------WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWG 349 (615)
T ss_dssp SCCEEEECHHHHCHHHHHHHHHHHHHHHHH-------------HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred cceeEEeccccCCHHHHHhhhhhhhhHHHH-------------HhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcC
Confidence 33455554433 556677777666554444 32111122 3689999999999999999999999999
Q ss_pred C-EEEEECCC
Q 006864 253 M-NVIAHDPY 261 (628)
Q Consensus 253 ~-~V~~~d~~ 261 (628)
. ++..+|..
T Consensus 350 VG~ItLvD~D 359 (615)
T 4gsl_A 350 VRKITFVDNG 359 (615)
T ss_dssp CCEEEEECCC
T ss_pred CCEEEEEcCC
Confidence 6 78888864
No 424
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=93.48 E-value=0.089 Score=55.02 Aligned_cols=95 Identities=20% Similarity=0.224 Sum_probs=60.5
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCChhH---HHHc-CCc------cc---CHHHHhccCCEEEEcCCC
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADK---ARAV-GVE------LV---SFDQALATADFISLHMPL 293 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---a~~~-g~~------~~---sl~ell~~aDvV~l~~Pl 293 (628)
.++++.|.| .|.||+.+++.|...|++|++.++...... .... +++ .. ++.++++.+|+|+.++..
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 368899998 599999999999989999999887653321 1111 221 11 266778999999876653
Q ss_pred CccccccccHHHHhcCCC-C--cEEEEcCCCc
Q 006864 294 NPTTSKIFNDETFAKMKK-G--VRIVNVARGG 322 (628)
Q Consensus 294 t~~t~~li~~~~l~~mk~-g--ailIN~aRg~ 322 (628)
.....+......++.+++ | ..||+++...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 311112223444444432 3 4788887754
No 425
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.37 E-value=0.13 Score=54.14 Aligned_cols=28 Identities=29% Similarity=0.494 Sum_probs=24.5
Q ss_pred eEEEEecChhHHHHHHHHHcC-CCEEEEE
Q 006864 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAH 258 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~-G~~V~~~ 258 (628)
++||+|+|+||+.+++.|... +++|.+.
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~evvaV 32 (343)
T 2yyy_A 4 KVLINGYGSIGKRVADAVSMQDDMEVIGV 32 (343)
T ss_dssp EEEEECCSHHHHHHHHHHHHSSSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEE
Confidence 799999999999999998765 5887765
No 426
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=93.34 E-value=1.1 Score=47.31 Aligned_cols=102 Identities=20% Similarity=0.132 Sum_probs=66.2
Q ss_pred hHHHhcCceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEec-------ChhHH
Q 006864 170 QAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-------GKVGS 242 (628)
Q Consensus 170 ~aa~~~GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGl-------G~IG~ 242 (628)
..|....|+|.|. |.+..++- +++=++.+.+++ ...++.|++++++|. .++..
T Consensus 151 ~~a~~~~vPVIN~-g~~~HPtQ--aL~Dl~Ti~e~~-----------------G~~dl~g~kv~~~~~~~gd~~~~~Va~ 210 (359)
T 3kzn_A 151 SFAKYSPVPVINM-ETITHPCQ--ELAHALALQEHF-----------------GTPDLRGKKYVLTWTYHPKPLNTAVAN 210 (359)
T ss_dssp HHHHHCSSCEEES-SSSCCHHH--HHHHHHHHHHHH-----------------TSSCCTTCEEEEEECCCSSCCCSHHHH
T ss_pred HHHHhCCCcccCc-ccccCchH--HHHHHHHHHHHc-----------------CCccccCCeEEEEEeecCCccccchhh
Confidence 4456678999996 54443332 222233333211 123688999999976 36888
Q ss_pred HHHHHHHcCCCEEEEECCCC---C-hh-------HHHHcCCc--c-cCHHHHhccCCEEEEcC
Q 006864 243 EVARRAKGLGMNVIAHDPYA---P-AD-------KARAVGVE--L-VSFDQALATADFISLHM 291 (628)
Q Consensus 243 ~vA~~l~~~G~~V~~~d~~~---~-~~-------~a~~~g~~--~-~sl~ell~~aDvV~l~~ 291 (628)
+....+..||++|...-|.. + .. .+.+.|.. . .++++.++.||+|..-.
T Consensus 211 S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDvvyt~r 273 (359)
T 3kzn_A 211 SALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp HHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEEC
T ss_pred hhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHHhcCCeEEEEEE
Confidence 99999999999999987741 1 11 12233432 2 38999999999998754
No 427
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=93.34 E-value=0.14 Score=57.69 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=62.3
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-------------------Chh-----HHHHc--CCc--c-
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-------------------PAD-----KARAV--GVE--L- 274 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~~-----~a~~~--g~~--~- 274 (628)
..|++++|.|||+|.+|..+|+.|...|. ++..+|... +.. ...+. +++ .
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~ 402 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 402 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence 57899999999999999999999999996 788887531 000 01111 111 0
Q ss_pred ---------------------cCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 275 ---------------------VSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 275 ---------------------~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
..++++++++|+|+.++. +.+++.++++..... +..+|+.+
T Consensus 403 ~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 403 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp CCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred eccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 013567889999998886 556788887766543 33566643
No 428
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.34 E-value=0.05 Score=57.15 Aligned_cols=45 Identities=20% Similarity=0.212 Sum_probs=36.4
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+| .|.||..+++.++.+|++|++.++.. ..+.++++|+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga 209 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC 209 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC
Confidence 478999999 79999999999999999999998763 2234455554
No 429
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.28 E-value=0.032 Score=58.59 Aligned_cols=99 Identities=16% Similarity=0.108 Sum_probs=58.7
Q ss_pred eEEEEecChhHHHHHHHHHcC---------CCEEEE-ECCCCChhHHHHcCC--cccCHHHHhccCCEEEEcCCCCcccc
Q 006864 231 TLAVMGFGKVGSEVARRAKGL---------GMNVIA-HDPYAPADKARAVGV--ELVSFDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~---------G~~V~~-~d~~~~~~~a~~~g~--~~~sl~ell~~aDvV~l~~Plt~~t~ 298 (628)
++||||+|.||+.+++.++.. +++|.+ +|+..... +..+. ...++++++ +.|+|+.|+|-.. ..
T Consensus 5 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~--~~~~~~~~~~d~~~ll-~iDvVve~t~~~~-~a 80 (332)
T 2ejw_A 5 KIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP--RAIPQELLRAEPFDLL-EADLVVEAMGGVE-AP 80 (332)
T ss_dssp EEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC--CSSCGGGEESSCCCCT-TCSEEEECCCCSH-HH
T ss_pred EEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh--hccCcccccCCHHHHh-CCCEEEECCCCcH-HH
Confidence 799999999999999998765 467655 56653211 11111 123778888 9999999988432 11
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCch-hcHHHHHHHHhCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVARGGV-IDEEALVRALDSG 336 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg~~-vde~aL~~aL~~g 336 (628)
. .-..+.|+.|.-+|...-..+ ...+.|.++.++.
T Consensus 81 ~---~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 81 L---RLVLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H---HHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H---HHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 1 112233555655555321122 2445666666665
No 430
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.28 E-value=0.06 Score=55.17 Aligned_cols=86 Identities=15% Similarity=0.116 Sum_probs=56.2
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc--CHHHHhccCCEEEEcCCCCccccccccHHH
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV--SFDQALATADFISLHMPLNPTTSKIFNDET 305 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~--sl~ell~~aDvV~l~~Plt~~t~~li~~~~ 305 (628)
.|.++.|+|.|.+|...++.++.+|++|++.+.....+.++++|+..+ +.+++-...|+|+-++.. +.+ ...
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~-~~~-----~~~ 215 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNS-QNA-----AAL 215 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCc-hhH-----HHH
Confidence 478999999999999999999999999999993335566777776432 211222346666665542 111 234
Q ss_pred HhcCCCCcEEEEcC
Q 006864 306 FAKMKKGVRIVNVA 319 (628)
Q Consensus 306 l~~mk~gailIN~a 319 (628)
++.++++..++.++
T Consensus 216 ~~~l~~~G~~v~~g 229 (315)
T 3goh_A 216 VPSLKANGHIICIQ 229 (315)
T ss_dssp GGGEEEEEEEEEEC
T ss_pred HHHhcCCCEEEEEe
Confidence 55667777777663
No 431
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.27 E-value=0.098 Score=50.16 Aligned_cols=65 Identities=14% Similarity=0.116 Sum_probs=46.3
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCc-----c----cCHHHHhccCCEEEEcCCCCc
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE-----L----VSFDQALATADFISLHMPLNP 295 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~-----~----~sl~ell~~aDvV~l~~Plt~ 295 (628)
++|.|.| .|.||+.+++.|...|++|++.++........ .+++ . .++.++++.+|+|+.+.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 3688998 89999999999999999999998764221100 1111 1 135567788999988876554
No 432
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.27 E-value=0.074 Score=54.87 Aligned_cols=35 Identities=34% Similarity=0.335 Sum_probs=32.0
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.|+++.|.|. |.||..+++.++..|++|++.|+..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 180 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD 180 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5799999998 9999999999999999999998753
No 433
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=93.26 E-value=0.078 Score=55.06 Aligned_cols=62 Identities=8% Similarity=0.066 Sum_probs=44.8
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEE-ECCCC--ChhHHH----HcCC--c-ccCHHHHhcc--CCEEEEcCC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPYA--PADKAR----AVGV--E-LVSFDQALAT--ADFISLHMP 292 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~--~~~~a~----~~g~--~-~~sl~ell~~--aDvV~l~~P 292 (628)
.++||||+|.+|+..++.+ .-+++|.+ +|+.. ..+.+. +.|+ . +.++++++++ .|+|++++|
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 76 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTV 76 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSS
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 4799999999999777777 56788775 68764 222222 2354 2 3489999975 899999998
No 434
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.25 E-value=0.069 Score=55.41 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=37.5
Q ss_pred cCCeEEEEecC-hhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMGFG-KVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIGlG-~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+|.| .||...++.++.+|++|++.++.. ..+.++++|.
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga 190 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA 190 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC
Confidence 57899999998 999999999999999999998765 3455566665
No 435
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.23 E-value=0.044 Score=56.66 Aligned_cols=45 Identities=27% Similarity=0.314 Sum_probs=36.2
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCC-hhHH-HHcCC
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAP-ADKA-RAVGV 272 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a-~~~g~ 272 (628)
.|+++.|+|. |.||..+++.++.+|++|++.++... .+.+ +++|+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 196 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF 196 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence 4789999999 99999999999999999999987642 2333 44554
No 436
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.23 E-value=0.092 Score=57.82 Aligned_cols=108 Identities=15% Similarity=0.241 Sum_probs=71.4
Q ss_pred CCeEEEEecChhHHH-HHHHHHcCCCEEEEECCCCCh--hHHHHcCCccc--CHHHHhccCCEEEEc--CCCC-ccc---
Q 006864 229 GKTLAVMGFGKVGSE-VARRAKGLGMNVIAHDPYAPA--DKARAVGVELV--SFDQALATADFISLH--MPLN-PTT--- 297 (628)
Q Consensus 229 GktiGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~--~~a~~~g~~~~--sl~ell~~aDvV~l~--~Plt-~~t--- 297 (628)
.|++.|||+|.+|.+ +|+.|+..|++|.++|..... +..++.|++.. .-.+.+..+|+|++. +|.+ |+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a 101 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAA 101 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHH
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHH
Confidence 589999999999996 899999999999999976533 23455677543 122346789999885 4432 211
Q ss_pred --c--ccccH-HHHhc-CCCC-cEEEEcCCCchhcHHHHHHHHhCC
Q 006864 298 --S--KIFND-ETFAK-MKKG-VRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 298 --~--~li~~-~~l~~-mk~g-ailIN~aRg~~vde~aL~~aL~~g 336 (628)
+ .++.+ +.|.. |+.. .+-|-=+.|+.--..-+...|+..
T Consensus 102 ~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 147 (494)
T 4hv4_A 102 REARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEA 147 (494)
T ss_dssp HHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred HHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhc
Confidence 1 12333 23333 3322 355555689988888888888753
No 437
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.15 E-value=0.069 Score=55.21 Aligned_cols=45 Identities=22% Similarity=0.226 Sum_probs=36.9
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+| .|.||...++.++.+|++|++.++.. ..+.++++|.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga 194 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA 194 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 578999999 89999999999999999999998754 2334555554
No 438
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.15 E-value=0.13 Score=55.60 Aligned_cols=85 Identities=15% Similarity=0.179 Sum_probs=59.8
Q ss_pred cCCeEEEEecC----------hhHHHHHHHHHcCCCEEEEECCCCChhHH----HHcC--------Ccc-cCHHHHhccC
Q 006864 228 VGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKA----RAVG--------VEL-VSFDQALATA 284 (628)
Q Consensus 228 ~GktiGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a----~~~g--------~~~-~sl~ell~~a 284 (628)
.|++|+|+|+. .-...+++.|...|++|.+|||+.+.... ..++ ..+ .++.+.++.|
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 79999999997 46789999999999999999998422110 1111 122 3688899999
Q ss_pred CEEEEcCCCCccccccccHHHHhcCCCCcEEEEc
Q 006864 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (628)
Q Consensus 285 DvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 318 (628)
|+|++++.- ++-+.+ + .+.|+ +.+|+|+
T Consensus 392 d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 392 DVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp SEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred cEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 999998874 332211 1 34455 6788887
No 439
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.12 E-value=0.073 Score=55.84 Aligned_cols=30 Identities=30% Similarity=0.491 Sum_probs=25.0
Q ss_pred CeEEEEecChhHHHHHHHHHcC---CCEEEEEC
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL---GMNVIAHD 259 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~---G~~V~~~d 259 (628)
.+|||+|+|+||+.+.+.|... .++|.+.+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain 33 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIN 33 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 4799999999999999998754 58988664
No 440
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=93.09 E-value=0.16 Score=53.79 Aligned_cols=132 Identities=17% Similarity=0.248 Sum_probs=88.2
Q ss_pred CeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEcCCCCccccccccHHHHhc-
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAK- 308 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~- 308 (628)
.++-|+|.|.+|+++++.++.+|++|.++|++..... .+-+..+|-++..-| .+.+..
T Consensus 200 ~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~-----------~~~fp~a~~v~~~~p----------~~~~~~~ 258 (362)
T 3on5_A 200 ERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCE-----------KHFFPDADEIIVDFP----------ADFLRKF 258 (362)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGC-----------GGGCTTCSEEEESCH----------HHHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccc-----------cccCCCceEEecCCH----------HHHHhhc
Confidence 4799999999999999999999999999998742110 112345665554333 223333
Q ss_pred -CCCCcEEEEcCCCchhcHHHHHHHHhCCCeeEEEe---e-----ccCCCCCCCCCccccCCcEEEcC---CCCCCcHHH
Q 006864 309 -MKKGVRIVNVARGGVIDEEALVRALDSGVVAQAAL---D-----VFTEEPPAKDSKLVQHENVTVTP---HLGASTKEA 376 (628)
Q Consensus 309 -mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga~l---D-----V~~~EP~~~~~~L~~~~nvilTP---Hig~~T~ea 376 (628)
+.+++.+|=..++.-.|...|.++|+.. ....|+ - ..+..- ...+ |-+| .+|+.|.+
T Consensus 259 ~~~~~t~vvv~TH~h~~D~~~L~~aL~~~-~~YiG~iGSr~R~~rl~~~g~--------~~~r-i~~PIGL~Iga~tP~- 327 (362)
T 3on5_A 259 LIRPDDFVLIMTHHFQKDQEILHFLLEKE-LRYIGILGSKERTRRLLQNRK--------PPDH-LYSPVGLSIDAQGPE- 327 (362)
T ss_dssp CCCTTCEEEECCSCHHHHHHHHHHHSSSC-CSEEEESSCHHHHHHHHTSCC--------CCTT-EESSCSCCSCCCSHH-
T ss_pred CCCCCeEEEEEeCCchhhHHHHHHHhcCC-CCEEEEeCCHHHHHHHHhcCC--------cHhh-eECCCCCCCCCCCHH-
Confidence 6778888888899999999999999875 222222 1 111110 0112 3444 47888875
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q 006864 377 QEGVAIEIAEAVVGALRGE 395 (628)
Q Consensus 377 ~~~~~~~~~~~i~~~l~g~ 395 (628)
.++.-++-+|....+|.
T Consensus 328 --EIAvSI~AEiia~~~~~ 344 (362)
T 3on5_A 328 --EIAISIVAQLIQLIRSR 344 (362)
T ss_dssp --HHHHHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHHHHhCC
Confidence 56788888888888877
No 441
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.08 E-value=0.18 Score=53.26 Aligned_cols=85 Identities=14% Similarity=0.206 Sum_probs=56.5
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCC-CEEEEECCCCC--hhHH-------HHcCCcccCHHHHhccCCEEEEcCCCCcccc
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLG-MNVIAHDPYAP--ADKA-------RAVGVELVSFDQALATADFISLHMPLNPTTS 298 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~--~~~a-------~~~g~~~~sl~ell~~aDvV~l~~Plt~~t~ 298 (628)
.++|||| .|.+|+++.++|.... .++........ .... .++-++..+.++++.++|++++|+|-..
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~--- 90 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGA--- 90 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTH---
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHH---
Confidence 5799996 7999999999998765 46665532211 1111 1122223356677788999999999432
Q ss_pred ccccHHHHhcCCCCcEEEEcCCC
Q 006864 299 KIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 299 ~li~~~~l~~mk~gailIN~aRg 321 (628)
..+....+ .|+.+||.+.-
T Consensus 91 ---s~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 91 ---SYDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp ---HHHHHTTC-CSCEEEESSST
T ss_pred ---HHHHHHHh-CCCEEEECChh
Confidence 34555556 79999998743
No 442
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.06 E-value=0.2 Score=51.57 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=45.9
Q ss_pred ecCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC--ChhHH------HHcCCccc--------CHHHHhc--cCCEE
Q 006864 227 LVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA--PADKA------RAVGVELV--------SFDQALA--TADFI 287 (628)
Q Consensus 227 l~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~--~~~~a------~~~g~~~~--------sl~ell~--~aDvV 287 (628)
+..++|.|.|. |.||+.+++.|...|.+|.+.++.. ..... ...+++.+ ++.++++ .+|+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 34679999997 9999999999999999999998764 22221 12344321 3566777 88888
Q ss_pred EEcCC
Q 006864 288 SLHMP 292 (628)
Q Consensus 288 ~l~~P 292 (628)
+.+..
T Consensus 88 i~~a~ 92 (346)
T 3i6i_A 88 VSTVG 92 (346)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 77665
No 443
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.05 E-value=0.2 Score=50.32 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=46.0
Q ss_pred CCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC----Ch-hHH------HHcCCccc--------CHHHHhccCCEEE
Q 006864 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA----PA-DKA------RAVGVELV--------SFDQALATADFIS 288 (628)
Q Consensus 229 GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~----~~-~~a------~~~g~~~~--------sl~ell~~aDvV~ 288 (628)
+++|.|.|. |.||+.+++.|...|++|++.++.. .. +.. ...+++.+ ++.++++.+|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999995 9999999999998899999987764 11 111 12344321 3567777888887
Q ss_pred EcCCC
Q 006864 289 LHMPL 293 (628)
Q Consensus 289 l~~Pl 293 (628)
.+++.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 76653
No 444
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=93.03 E-value=0.13 Score=52.51 Aligned_cols=87 Identities=18% Similarity=0.271 Sum_probs=55.0
Q ss_pred CeEEEEe-cChhHHHHHHHHHc-CCCEEEE-ECCCCChhH----HH----HcCCcc-cCHHHHhccCCEEEEcCCCCccc
Q 006864 230 KTLAVMG-FGKVGSEVARRAKG-LGMNVIA-HDPYAPADK----AR----AVGVEL-VSFDQALATADFISLHMPLNPTT 297 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~-~G~~V~~-~d~~~~~~~----a~----~~g~~~-~sl~ell~~aDvV~l~~Plt~~t 297 (628)
.+|+|+| +|+||+.+++.+.. -++++.+ +|+..+... .. ..|+.. .++++++.++|+|+-+.| ++.
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~--p~a 85 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL--PEG 85 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC--HHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC--HHH
Confidence 5899999 99999999998874 5788877 687532111 00 013433 379999999999998875 332
Q ss_pred cccccHHHHhcCCCCcEEEEcCCC
Q 006864 298 SKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 298 ~~li~~~~l~~mk~gailIN~aRg 321 (628)
.. +..-..++.|.-+|-...|
T Consensus 86 ~~---~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 86 TL---VHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp HH---HHHHHHHHHTCEEEECCCC
T ss_pred HH---HHHHHHHHcCCCEEEECCC
Confidence 11 1111224556556654444
No 445
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=93.02 E-value=0.17 Score=48.25 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=37.7
Q ss_pred CcEEEEeccCCCCchhhHHhhhhcCCccccceEEeeee------cCccEEEEEEeC
Q 006864 558 GNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTF------RRNHGIMAIGVD 607 (628)
Q Consensus 558 ~~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~------~gg~Al~~i~vD 607 (628)
.+.|.+.-+|+||++++|+.+|+++++||.+++..... ..+.-.|.+.++
T Consensus 93 ~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~ 148 (192)
T 1u8s_A 93 TVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISAR 148 (192)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEE
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEe
Confidence 34566677999999999999999999999999887543 334555666554
No 446
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.92 E-value=0.39 Score=47.47 Aligned_cols=38 Identities=29% Similarity=0.395 Sum_probs=33.2
Q ss_pred eeecCCeEEEEec-Ch--hHHHHHHHHHcCCCEEEEECCCC
Q 006864 225 VSLVGKTLAVMGF-GK--VGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 225 ~~l~GktiGIIGl-G~--IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.++.||++.|.|. |. ||+++|+.|...|++|++.++..
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 3578999999997 45 99999999999999999987764
No 447
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.89 E-value=0.17 Score=52.55 Aligned_cols=88 Identities=20% Similarity=0.148 Sum_probs=63.3
Q ss_pred cCCeEEEEecChhHHHHHHHHHcC-CCEEEEECCCC-ChhHHHHcCCccc-----CHH----HHhc--cCCEEEEcCCCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGL-GMNVIAHDPYA-PADKARAVGVELV-----SFD----QALA--TADFISLHMPLN 294 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~-~~~~a~~~g~~~~-----sl~----ell~--~aDvV~l~~Plt 294 (628)
.|.++.|+|.|.+|...++.++.+ |.+|++.|+.. ..+.++++|+..+ ++. ++.. ..|+|+-++...
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~ 250 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQ 250 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCH
Confidence 478999999999999999999988 78999998765 3456677886432 222 2222 589998887632
Q ss_pred ccccccccHHHHhcCCCCcEEEEcCC
Q 006864 295 PTTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 295 ~~t~~li~~~~l~~mk~gailIN~aR 320 (628)
. .-...++.++++..++.++-
T Consensus 251 ~-----~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 251 S-----TIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp H-----HHHHHHHHEEEEEEEEECSC
T ss_pred H-----HHHHHHHHHhcCCEEEEECC
Confidence 1 12456677888888888763
No 448
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.88 E-value=0.11 Score=55.22 Aligned_cols=46 Identities=39% Similarity=0.435 Sum_probs=37.9
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVE 273 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~ 273 (628)
.|.++.|+|.|.||...++.++.+|+ +|++.|+.. ..+.++++|+.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 232 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE 232 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 47899999999999999999999999 799998764 33456667754
No 449
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.84 E-value=0.076 Score=54.74 Aligned_cols=45 Identities=31% Similarity=0.417 Sum_probs=36.5
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+| .|.||...++.++.+|++|++.++.. ..+.++++|.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga 186 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA 186 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 578999999 89999999999999999999998754 2334455554
No 450
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=92.83 E-value=0.079 Score=55.82 Aligned_cols=84 Identities=17% Similarity=0.284 Sum_probs=48.5
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCC-CEEEEE-CCC--CChhHHHHc-------------CCccc--CHHHHhccCCEEEE
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLG-MNVIAH-DPY--APADKARAV-------------GVELV--SFDQALATADFISL 289 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G-~~V~~~-d~~--~~~~~a~~~-------------g~~~~--sl~ell~~aDvV~l 289 (628)
.++||+| +|.||+.+.+.|.... +++.+. +.. ......... ..... +.++ +..+|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 4799999 9999999999997654 677666 322 111111111 11122 3333 478999999
Q ss_pred cCCCCccccccccHHHHhcCCCCcEEEEcC
Q 006864 290 HMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 290 ~~Plt~~t~~li~~~~l~~mk~gailIN~a 319 (628)
|+|-.. ++.+ .-..++.|+.+|+.+
T Consensus 84 atp~~~-s~~~----a~~~~~aG~~VId~s 108 (350)
T 2ep5_A 84 ALPNEL-AESI----ELELVKNGKIVVSNA 108 (350)
T ss_dssp CCCHHH-HHHH----HHHHHHTTCEEEECS
T ss_pred CCChHH-HHHH----HHHHHHCCCEEEECC
Confidence 998332 1111 111235577777765
No 451
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.81 E-value=0.14 Score=49.61 Aligned_cols=68 Identities=16% Similarity=0.081 Sum_probs=47.6
Q ss_pred ecCCeEEEEe-cChhHHHHHHHHHcC--CCEEEEECCCCChhHHHHcCCcc--------cCHHHHhccCCEEEEcCCCC
Q 006864 227 LVGKTLAVMG-FGKVGSEVARRAKGL--GMNVIAHDPYAPADKARAVGVEL--------VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 227 l~GktiGIIG-lG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~g~~~--------~sl~ell~~aDvV~l~~Plt 294 (628)
..+|++.|.| .|.||+.+++.|... |++|++.++..........++.. .+++++++.+|+|+.+....
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~ 80 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAV 80 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEecccc
Confidence 3578999998 699999999999988 89999998763211111112221 13667788899988776543
No 452
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=92.78 E-value=0.15 Score=55.63 Aligned_cols=101 Identities=21% Similarity=0.311 Sum_probs=60.2
Q ss_pred CeEEEEecChhHHHHHHHHHcC-CCEEEE-ECCCCChh--HHHHc-C----------------------Cc-ccCHHHHh
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL-GMNVIA-HDPYAPAD--KARAV-G----------------------VE-LVSFDQAL 281 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~~~--~a~~~-g----------------------~~-~~sl~ell 281 (628)
-+|||||+|.||+.+++.++.. ++++.+ +|+..... .+.+. | +. ..++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 3799999999999999988754 677665 57765221 12222 4 12 23899999
Q ss_pred c--cCCEEEEcCCCCccccccccHHHHhcCCCCcEEE--EcCCCchhcHHHHHHHHhC
Q 006864 282 A--TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIV--NVARGGVIDEEALVRALDS 335 (628)
Q Consensus 282 ~--~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailI--N~aRg~~vde~aL~~aL~~ 335 (628)
+ +.|+|++++|.. +... +-.++.|+.|.-++ |.+- ....-+.|.++-++
T Consensus 104 ~d~dIDaVviaTp~p-~~H~---e~a~~AL~AGKHVv~~nk~l-~~~eg~eL~~~A~e 156 (446)
T 3upl_A 104 SNPLIDVIIDATGIP-EVGA---ETGIAAIRNGKHLVMMNVEA-DVTIGPYLKAQADK 156 (446)
T ss_dssp TCTTCCEEEECSCCH-HHHH---HHHHHHHHTTCEEEECCHHH-HHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCCh-HHHH---HHHHHHHHcCCcEEecCccc-CHHHHHHHHHHHHH
Confidence 7 589999999843 2111 22333455565555 4320 11123455555544
No 453
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=92.77 E-value=0.065 Score=57.51 Aligned_cols=86 Identities=13% Similarity=0.144 Sum_probs=55.3
Q ss_pred CeEEEEecChhHHHHHHHHHcCC---CEEEEECCCCChh--HHHHc------CCc--------ccCHHHHhcc--CCEEE
Q 006864 230 KTLAVMGFGKVGSEVARRAKGLG---MNVIAHDPYAPAD--KARAV------GVE--------LVSFDQALAT--ADFIS 288 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~G---~~V~~~d~~~~~~--~a~~~------g~~--------~~sl~ell~~--aDvV~ 288 (628)
++++|+|.|.||+.+++.|...| .+|.++|+..... .+..+ .+. ..++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999887 4999998874221 11211 121 1246778887 89999
Q ss_pred EcCCCCccccccccHHHHhcCCCCcEEEEcCC
Q 006864 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 289 l~~Plt~~t~~li~~~~l~~mk~gailIN~aR 320 (628)
.++|... ..-+-+ ..++.|.-+++++.
T Consensus 82 n~ag~~~--~~~v~~---a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 82 NIALPYQ--DLTIME---ACLRTGVPYLDTAN 108 (405)
T ss_dssp ECSCGGG--HHHHHH---HHHHHTCCEEESSC
T ss_pred ECCCccc--ChHHHH---HHHHhCCCEEEecC
Confidence 9987322 111111 22345666777643
No 454
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.77 E-value=0.12 Score=52.98 Aligned_cols=66 Identities=20% Similarity=0.173 Sum_probs=46.0
Q ss_pred eeeecCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcc--------cCHHHHhccCCEEEEcCCCC
Q 006864 224 GVSLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL--------VSFDQALATADFISLHMPLN 294 (628)
Q Consensus 224 g~~l~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~--------~sl~ell~~aDvV~l~~Plt 294 (628)
.....+|+|.|.|. |.||+.+++.|...|++|++.++.... .++.. .+++++++.+|+|+.+....
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 35688999999997 999999999999999999999876532 12211 13678888999998776543
No 455
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.73 E-value=0.066 Score=53.59 Aligned_cols=62 Identities=19% Similarity=0.290 Sum_probs=45.1
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcc--------cCHHHHhcc-CCEEEEcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL--------VSFDQALAT-ADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~--------~sl~ell~~-aDvV~l~~P 292 (628)
.+++|.|.|.|.||+.+++.|...|++|++.++..... ..+++. .+++++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 46899999999999999999999999999998764321 112221 134556666 999876653
No 456
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.71 E-value=0.085 Score=57.08 Aligned_cols=109 Identities=18% Similarity=0.180 Sum_probs=71.3
Q ss_pred eecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh---hHHHHcCCccc---CHHHHhccCCEEEEcCCCCc---c
Q 006864 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA---DKARAVGVELV---SFDQALATADFISLHMPLNP---T 296 (628)
Q Consensus 226 ~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~a~~~g~~~~---sl~ell~~aDvV~l~~Plt~---~ 296 (628)
++.||++.|||+|..|.+.|+.|+..|++|.++|..... .... .|++.. ...+.+..+|+|++.-...+ +
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGIALAHPS 80 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTTSCTTCHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCCCCCCCHH
Confidence 357899999999999999999999999999999976422 2223 566542 12455668999988643322 1
Q ss_pred c-------cccccHH-HH-hcCCCCcEEEEcCCCchhcHHHHHHHHhC
Q 006864 297 T-------SKIFNDE-TF-AKMKKGVRIVNVARGGVIDEEALVRALDS 335 (628)
Q Consensus 297 t-------~~li~~~-~l-~~mk~gailIN~aRg~~vde~aL~~aL~~ 335 (628)
. ...+.+- .+ ..++...+-|-=+.|+---..-|...|+.
T Consensus 81 ~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~ 128 (439)
T 2x5o_A 81 LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKA 128 (439)
T ss_dssp HHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHh
Confidence 1 1223331 12 22454455565567888777777777765
No 457
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.61 E-value=0.075 Score=55.20 Aligned_cols=35 Identities=26% Similarity=0.489 Sum_probs=32.5
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA 262 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~ 262 (628)
.|+++.|+|.|.+|...++.++.+|+ +|++.++..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 68999999999999999999999999 999999763
No 458
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.54 E-value=0.16 Score=56.33 Aligned_cols=110 Identities=15% Similarity=0.195 Sum_probs=71.9
Q ss_pred ecCCeEEEEecChhHHH-HHHHHHcCCCEEEEECCCCCh---hHHHHcCCccc---CHHHHhccCCEEEEc--CCCC-cc
Q 006864 227 LVGKTLAVMGFGKVGSE-VARRAKGLGMNVIAHDPYAPA---DKARAVGVELV---SFDQALATADFISLH--MPLN-PT 296 (628)
Q Consensus 227 l~GktiGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~---~~a~~~g~~~~---sl~ell~~aDvV~l~--~Plt-~~ 296 (628)
..++++-|||.|.+|.+ +|+.|+..|++|.++|..... +..++.|++.. ..+.+...+|+|+.. +|.+ |+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 45789999999999997 799999999999999976422 23455677643 344555779999885 4422 22
Q ss_pred cc-------ccccHH-HHhc--CCC-CcEEEEcCCCchhcHHHHHHHHhCC
Q 006864 297 TS-------KIFNDE-TFAK--MKK-GVRIVNVARGGVIDEEALVRALDSG 336 (628)
Q Consensus 297 t~-------~li~~~-~l~~--mk~-gailIN~aRg~~vde~aL~~aL~~g 336 (628)
.. .++.+. .|.. ++. ..+-|-=+.|+.--..-+...|+..
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~ 147 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYA 147 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHc
Confidence 11 133333 3333 332 2455555788888888777777653
No 459
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=92.48 E-value=0.22 Score=54.33 Aligned_cols=113 Identities=18% Similarity=0.191 Sum_probs=72.9
Q ss_pred CeEEEEecChh-HHHHHHHHHc----C-CCEEEEECCCC--ChhH-----HH----HcCC----cc-cCHHHHhccCCEE
Q 006864 230 KTLAVMGFGKV-GSEVARRAKG----L-GMNVIAHDPYA--PADK-----AR----AVGV----EL-VSFDQALATADFI 287 (628)
Q Consensus 230 ktiGIIGlG~I-G~~vA~~l~~----~-G~~V~~~d~~~--~~~~-----a~----~~g~----~~-~sl~ell~~aDvV 287 (628)
++|+|||.|.. |..++..|.. + +.+|..||... .... .. ..+. .. .++++.++.||+|
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~V 87 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV 87 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCEE
Confidence 58999999998 8776655543 3 56899999865 2111 11 1121 12 3788999999999
Q ss_pred EEcCCCCcc---cc--------ccc---------------c-------HHHHhcCCCCcEEEEcCCCchhcHHHHHHHHh
Q 006864 288 SLHMPLNPT---TS--------KIF---------------N-------DETFAKMKKGVRIVNVARGGVIDEEALVRALD 334 (628)
Q Consensus 288 ~l~~Plt~~---t~--------~li---------------~-------~~~l~~mk~gailIN~aRg~~vde~aL~~aL~ 334 (628)
++++|.... ++ +++ + .+.+....|+++++|.+-.-=+-..++.+...
T Consensus 88 Vitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~p 167 (450)
T 1s6y_A 88 TTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTK 167 (450)
T ss_dssp EECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHCC
T ss_pred EEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCC
Confidence 999995321 11 110 0 12344457899999998766666677777654
Q ss_pred CCCeeEEE
Q 006864 335 SGVVAQAA 342 (628)
Q Consensus 335 ~g~i~ga~ 342 (628)
..++.|.+
T Consensus 168 ~~rViG~c 175 (450)
T 1s6y_A 168 QEKVVGLC 175 (450)
T ss_dssp CCCEEECC
T ss_pred CCCEEEeC
Confidence 45777753
No 460
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=92.47 E-value=0.086 Score=54.26 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=64.0
Q ss_pred CeEEEEec-ChhHHHHHHHHHcCCCEE-EEECCCCChhHHHHcCCccc-CHHHHhc--cCCEEEEcCCCCccccccccHH
Q 006864 230 KTLAVMGF-GKVGSEVARRAKGLGMNV-IAHDPYAPADKARAVGVELV-SFDQALA--TADFISLHMPLNPTTSKIFNDE 304 (628)
Q Consensus 230 ktiGIIGl-G~IG~~vA~~l~~~G~~V-~~~d~~~~~~~a~~~g~~~~-sl~ell~--~aDvV~l~~Plt~~t~~li~~~ 304 (628)
.++.|+|. |++|+.+++.++..|+++ ...+|..... .-.|+... +++++.+ .+|++++++|-. .+...+ ++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~-~~~~~v-~e 89 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQ--NVHGVPVFDTVKEAVKETDANASVIFVPAP-FAKDAV-FE 89 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHH-HH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCc--eECCEeeeCCHHHHhhcCCCCEEEEccCHH-HHHHHH-HH
Confidence 35778899 999999999999889873 3567753211 11465543 7999998 899999999822 222222 22
Q ss_pred HHhcCCCCcE-EEEcCCC-chhcHHHHHHHHhCCCe
Q 006864 305 TFAKMKKGVR-IVNVARG-GVIDEEALVRALDSGVV 338 (628)
Q Consensus 305 ~l~~mk~gai-lIN~aRg-~~vde~aL~~aL~~g~i 338 (628)
..+ .|.- +|..+.| ...+++.|.++.++..+
T Consensus 90 a~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi 122 (294)
T 2yv1_A 90 AID---AGIELIVVITEHIPVHDTMEFVNYAEDVGV 122 (294)
T ss_dssp HHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred HHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 232 3333 4444444 22456678887776444
No 461
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=92.47 E-value=0.2 Score=51.43 Aligned_cols=87 Identities=18% Similarity=0.185 Sum_probs=55.7
Q ss_pred CeEEEEe-cChhHHHHHHHHH-cCCCEEEE-ECCCCCh----hHHH-----HcCCccc-CHHHHhccCCEEEEcCCCCcc
Q 006864 230 KTLAVMG-FGKVGSEVARRAK-GLGMNVIA-HDPYAPA----DKAR-----AVGVELV-SFDQALATADFISLHMPLNPT 296 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~-~~G~~V~~-~d~~~~~----~~a~-----~~g~~~~-sl~ell~~aDvV~l~~Plt~~ 296 (628)
.+|+|+| +|+||+.+++.+. .-++++.+ +|+..+. +... ..|+... ++++++.++|+|+-..+ ++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~--p~ 99 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ--PQ 99 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC--HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC--HH
Confidence 4899999 9999999999987 45788765 5765321 1111 2344443 89999999999987764 32
Q ss_pred ccccccHHHHhcCCCCcEEEEcCCC
Q 006864 297 TSKIFNDETFAKMKKGVRIVNVARG 321 (628)
Q Consensus 297 t~~li~~~~l~~mk~gailIN~aRg 321 (628)
.. .+..-..++.|.-+|-...|
T Consensus 100 a~---~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 100 AS---VLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp HH---HHHHHHHHHHTCEEEECCCC
T ss_pred HH---HHHHHHHHHcCCCEEEECCC
Confidence 21 11112224566667655555
No 462
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.44 E-value=0.12 Score=50.09 Aligned_cols=68 Identities=15% Similarity=0.159 Sum_probs=47.6
Q ss_pred ecCCeEEEEe-cChhHHHHHHHHHcCCC--EEEEECCCCChh-HHHHcCCc--------ccCHHHHhccCCEEEEcCCCC
Q 006864 227 LVGKTLAVMG-FGKVGSEVARRAKGLGM--NVIAHDPYAPAD-KARAVGVE--------LVSFDQALATADFISLHMPLN 294 (628)
Q Consensus 227 l~GktiGIIG-lG~IG~~vA~~l~~~G~--~V~~~d~~~~~~-~a~~~g~~--------~~sl~ell~~aDvV~l~~Plt 294 (628)
+.||++.|.| .|.||+.+++.|...|. +|++.++..... .....++. ..+++++++.+|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5679999999 69999999999999999 999988764211 10111221 113556777889888877643
No 463
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.39 E-value=0.31 Score=51.24 Aligned_cols=47 Identities=19% Similarity=0.031 Sum_probs=37.3
Q ss_pred ecCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCc
Q 006864 227 LVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE 273 (628)
Q Consensus 227 l~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~ 273 (628)
-.|.++.|+|. |.+|...++.++.+|++|++.......+.++++|+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~ 210 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAE 210 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCc
Confidence 46899999999 899999999999999999887522234556677753
No 464
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.37 E-value=0.15 Score=53.92 Aligned_cols=45 Identities=31% Similarity=0.372 Sum_probs=36.8
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCC-CEEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLG-MNVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|+++.|+|.|.+|...++.++.+| .+|++.++.. ..+.++++|+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa 241 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA 241 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC
Confidence 4789999999999999999999999 6999998764 2344555664
No 465
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.34 E-value=0.19 Score=50.58 Aligned_cols=64 Identities=23% Similarity=0.365 Sum_probs=46.8
Q ss_pred CCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCC----hhHH------HHcCCccc--------CHHHHhccCCEEEE
Q 006864 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAP----ADKA------RAVGVELV--------SFDQALATADFISL 289 (628)
Q Consensus 229 GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~----~~~a------~~~g~~~~--------sl~ell~~aDvV~l 289 (628)
.++|.|.|. |.||+.+++.|...|++|++.++... .+.. ...+++.+ ++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 478999995 99999999999999999999987642 1111 12344322 35677888998877
Q ss_pred cCC
Q 006864 290 HMP 292 (628)
Q Consensus 290 ~~P 292 (628)
+++
T Consensus 84 ~a~ 86 (308)
T 1qyc_A 84 TVG 86 (308)
T ss_dssp CCC
T ss_pred CCc
Confidence 765
No 466
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.28 E-value=0.098 Score=53.82 Aligned_cols=35 Identities=26% Similarity=0.262 Sum_probs=31.9
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.|+++.|+| .|.||..+++.++..|++|++.++..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 478999999 79999999999999999999998763
No 467
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.28 E-value=0.22 Score=51.73 Aligned_cols=84 Identities=18% Similarity=0.200 Sum_probs=54.5
Q ss_pred CeEEEE-ecChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHh------ccCCEEEEcCCCCc
Q 006864 230 KTLAVM-GFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV------SFDQAL------ATADFISLHMPLNP 295 (628)
Q Consensus 230 ktiGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~------sl~ell------~~aDvV~l~~Plt~ 295 (628)
+++.|. |.|.||...++.++.+|++|++.++.. ..+.++++|+..+ ++.+.+ ...|+|+-++.. +
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~-~ 244 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG-P 244 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH-H
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC-h
Confidence 566665 999999999999999999999998764 3455666665321 222211 246777666541 1
Q ss_pred cccccccHHHHhcCCCCcEEEEcC
Q 006864 296 TTSKIFNDETFAKMKKGVRIVNVA 319 (628)
Q Consensus 296 ~t~~li~~~~l~~mk~gailIN~a 319 (628)
. + ...+..|+++..++.++
T Consensus 245 ---~-~-~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 245 ---L-A-SAIFNAMPKRARWIIYG 263 (349)
T ss_dssp ---H-H-HHHHHHSCTTCEEEECC
T ss_pred ---h-H-HHHHhhhcCCCEEEEEe
Confidence 1 1 44566677777777665
No 468
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=92.26 E-value=0.17 Score=54.13 Aligned_cols=67 Identities=22% Similarity=0.321 Sum_probs=45.8
Q ss_pred cceeeecCCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCC--hhHHHHc-CC---ccc---CHHHHhccCCEEEE
Q 006864 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP--ADKARAV-GV---ELV---SFDQALATADFISL 289 (628)
Q Consensus 222 ~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~--~~~a~~~-g~---~~~---sl~ell~~aDvV~l 289 (628)
|++..+.+++|+|+|-|..|+.+++.++.+|++|+++| +.. ..+.... .. .+. .+.++++++|+|+.
T Consensus 17 ~~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 17 FQGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp ----CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred EeccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 44555678999999999999999999999999999998 432 1111110 11 111 26678889998865
No 469
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=92.21 E-value=0.21 Score=48.07 Aligned_cols=47 Identities=13% Similarity=0.158 Sum_probs=36.9
Q ss_pred cEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeC
Q 006864 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVD 607 (628)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD 607 (628)
..|.+.-+|+||++++|++.|+++|.||-..+... ..++-++ .+.++
T Consensus 6 ~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~-~~~~f~m-~~~v~ 52 (195)
T 2nyi_A 6 FVVSVAGSDRVGIVHDFSWALKNISANVESSRMAC-LGGDFAM-IVLVS 52 (195)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ETTEEEE-EEEEE
T ss_pred EEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEE-ECCeEEE-EEEEE
Confidence 35666789999999999999999999999999985 3444444 45554
No 470
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.21 E-value=0.069 Score=55.36 Aligned_cols=35 Identities=31% Similarity=0.352 Sum_probs=32.0
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.|+++.|+|. |.||..+++.++.+|++|++.++..
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~ 190 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK 190 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999997 9999999999999999999998763
No 471
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=92.18 E-value=0.29 Score=50.76 Aligned_cols=99 Identities=19% Similarity=0.223 Sum_probs=62.4
Q ss_pred CeEEEEe-cChhHHHHHHHHHc---CCCEEEEECCCCC-hhHHHHc-CC----ccc-----CHHHHhccCCEEEEcCCCC
Q 006864 230 KTLAVMG-FGKVGSEVARRAKG---LGMNVIAHDPYAP-ADKARAV-GV----ELV-----SFDQALATADFISLHMPLN 294 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~---~G~~V~~~d~~~~-~~~a~~~-g~----~~~-----sl~ell~~aDvV~l~~Plt 294 (628)
++|+||| .|.+|+++|..|.. +.-++..+|.... ...+.++ .. ... +..+.++.||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 4799999 99999999999964 5568999997641 1111111 11 111 3568899999999988643
Q ss_pred c---cccc-cc--cH-------HHHhcCCCCcEEEEcCCCchhcHHHHH
Q 006864 295 P---TTSK-IF--ND-------ETFAKMKKGVRIVNVARGGVIDEEALV 330 (628)
Q Consensus 295 ~---~t~~-li--~~-------~~l~~mk~gailIN~aRg~~vde~aL~ 330 (628)
. +++. ++ |. +.+....|.+++++++ ..+|.-..+
T Consensus 81 rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 81 RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 2 1221 11 11 1233346788999995 566655444
No 472
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=92.17 E-value=0.083 Score=55.53 Aligned_cols=86 Identities=15% Similarity=0.173 Sum_probs=53.3
Q ss_pred CeEEEEe-cChhHHHHHHHHHc-CCCEEEEECCCC---C--hhHHH----HcC---Cccc---CHHHHhccCCEEEEcCC
Q 006864 230 KTLAVMG-FGKVGSEVARRAKG-LGMNVIAHDPYA---P--ADKAR----AVG---VELV---SFDQALATADFISLHMP 292 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~-~G~~V~~~d~~~---~--~~~a~----~~g---~~~~---sl~ell~~aDvV~l~~P 292 (628)
.+++|+| .|.+|+++.++|.. -++++....... . ..... -.+ .... +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 4799999 69999999999987 456776653221 1 11110 011 1211 44555589999999998
Q ss_pred CCccccccccHHHH-hcCCCCcEEEEcCCC
Q 006864 293 LNPTTSKIFNDETF-AKMKKGVRIVNVARG 321 (628)
Q Consensus 293 lt~~t~~li~~~~l-~~mk~gailIN~aRg 321 (628)
-.. ..+.. ..++.|+.+|+.+.-
T Consensus 85 ~~~------s~~~~~~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 HEV------SHDLAPQFLEAGCVVFDLSGA 108 (337)
T ss_dssp HHH------HHHHHHHHHHTTCEEEECSST
T ss_pred hHH------HHHHHHHHHHCCCEEEEcCCc
Confidence 322 12221 125779999998743
No 473
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.16 E-value=0.13 Score=53.82 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=37.5
Q ss_pred cCCeEEEEecChhHHHH-HHHH-HcCCCE-EEEECCCCC----hhHHHHcCCc
Q 006864 228 VGKTLAVMGFGKVGSEV-ARRA-KGLGMN-VIAHDPYAP----ADKARAVGVE 273 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~v-A~~l-~~~G~~-V~~~d~~~~----~~~a~~~g~~ 273 (628)
.+.++.|+|.|.||... ++.+ +.+|.+ |++.++... .+.++++|+.
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~ 224 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT 224 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc
Confidence 34899999999999999 9999 999997 999988654 3455666653
No 474
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.14 E-value=0.13 Score=55.95 Aligned_cols=63 Identities=19% Similarity=0.187 Sum_probs=49.0
Q ss_pred cCCeEEEEecC----------hhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcc-cCHHHHhccCCEEEEcCC
Q 006864 228 VGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL-VSFDQALATADFISLHMP 292 (628)
Q Consensus 228 ~GktiGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-~sl~ell~~aDvV~l~~P 292 (628)
.|++|+|+|+- .-...++++|++.|.+|.+|||..+... -.+... .++++.++.||+|++.-.
T Consensus 331 ~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~~~~--~~~~~~~~~~~~~~~~aD~iv~~~~ 404 (432)
T 3pid_A 331 KPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQEDE--FFNSRVVRDLNAFKQEADVIISNRM 404 (432)
T ss_dssp CCSSEEEECC-----------CHHHHHHHHHHHTTCCEEEECTTCCSSE--ETTEEECCCHHHHHHHCSEEECSSC
T ss_pred cCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEEEECCCCChhh--cCCceEECCHHHHHhcCCEEEECCC
Confidence 48999999985 2368899999999999999999985432 123333 389999999999987654
No 475
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=92.14 E-value=1.1 Score=48.86 Aligned_cols=177 Identities=15% Similarity=0.091 Sum_probs=115.4
Q ss_pred CceEEcCCCCChhhHHHHHHHHHHHHHHchhHHHHHHHcCcccccccceeeecCCeEEEEecChhHHHHHHHHHcCCC--
Q 006864 176 GCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-- 253 (628)
Q Consensus 176 GI~V~n~p~~~~~avAE~~l~l~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~GktiGIIGlG~IG~~vA~~l~~~G~-- 253 (628)
.|+|.|.- -.-+|=-+++-+++.+| ..|..|...++.|.|.|.-|-.+|+.+...|+
T Consensus 187 ~ipvFnDD---~qGTA~V~lAgllnAlk------------------i~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~ 245 (487)
T 3nv9_A 187 DIPVWHDD---QQGTASVTLAGLLNALK------------------LVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADP 245 (487)
T ss_dssp SSCEEETT---THHHHHHHHHHHHHHHH------------------HHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCG
T ss_pred cCCccccc---cchHHHHHHHHHHHHHH------------------HhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 79999985 33455556777777766 24677888999999999999999999999998
Q ss_pred -EEEEECCCC----C-hhH------------HHHcCC-cccCHHHHhccCCEEEEcCCCCccccccccHHHHhcCCCCcE
Q 006864 254 -NVIAHDPYA----P-ADK------------ARAVGV-ELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVR 314 (628)
Q Consensus 254 -~V~~~d~~~----~-~~~------------a~~~g~-~~~sl~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gai 314 (628)
+++.+|+.- . .+. +....- ...+|.|+++.+|+++=.- .. .-+.+.++.++.|.+..+
T Consensus 246 ~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S-~~--~pg~ft~e~V~~Ma~~PI 322 (487)
T 3nv9_A 246 KKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLS-TP--GPGVVKAEWIKSMGEKPI 322 (487)
T ss_dssp GGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECC-CS--SCCCCCHHHHHTSCSSCE
T ss_pred ccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEec-cc--CCCCCCHHHHHhhcCCCE
Confidence 799988641 1 110 111111 2347999999999775432 11 147899999999999999
Q ss_pred EEEcCCCch-hcHHHHHHHHhCCC-eeEEEeeccCCCCCCCCCccccCCcEEEcCCCC---------CCcHHHHHHHHHH
Q 006864 315 IVNVARGGV-IDEEALVRALDSGV-VAQAALDVFTEEPPAKDSKLVQHENVTVTPHLG---------ASTKEAQEGVAIE 383 (628)
Q Consensus 315 lIN~aRg~~-vde~aL~~aL~~g~-i~ga~lDV~~~EP~~~~~~L~~~~nvilTPHig---------~~T~ea~~~~~~~ 383 (628)
|.-.+.... +..++ +.+.|+ |.+.|- -+.|. +..|+++-|-++ .-|++.+...+..
T Consensus 323 IFaLSNPtpEi~pe~---A~~~G~aIvATGr-----sd~Pn-----Q~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA~A 389 (487)
T 3nv9_A 323 VFCCANPVPEIYPYE---AKEAGAYIVATGR-----GDFPN-----QVNNSVGFPGILKGALIVRARKITDNMAIAASRA 389 (487)
T ss_dssp EEECCSSSCSSCHHH---HHHTTCSEEEESC-----TTSSS-----BCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred EEECCCCCccCCHHH---HHHhCCEEEEECC-----CCCcc-----cCcceeEcchhhHHHHHcCCcccCHHHHHHHHHH
Confidence 999987553 12222 233564 444431 12221 345676666544 3466766665555
Q ss_pred HHHHHH
Q 006864 384 IAEAVV 389 (628)
Q Consensus 384 ~~~~i~ 389 (628)
+++-+.
T Consensus 390 LA~~v~ 395 (487)
T 3nv9_A 390 LAEFAE 395 (487)
T ss_dssp HHHHHH
T ss_pred HHhhCC
Confidence 555443
No 476
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=92.03 E-value=0.12 Score=46.26 Aligned_cols=97 Identities=18% Similarity=0.166 Sum_probs=64.3
Q ss_pred CeEEEEec----ChhHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCcc-cCHHHHhccCCEEEEcCCCCccccccccHH
Q 006864 230 KTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDE 304 (628)
Q Consensus 230 ktiGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-~sl~ell~~aDvV~l~~Plt~~t~~li~~~ 304 (628)
|+|+|||. |+.|..+.+.|+..|++|+-.+|.... -.|... -++.++-. -|++++++|- +.+..++. +
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~----i~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v~-e 77 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE----VLGKTIINERPVIEG-VDTVTLYINP-QNQLSEYN-Y 77 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE----ETTEECBCSCCCCTT-CCEEEECSCH-HHHGGGHH-H
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc----CCCeeccCChHHCCC-CCEEEEEeCH-HHHHHHHH-H
Confidence 68999998 579999999999999999999987422 134443 36777777 8999999992 33444443 2
Q ss_pred HHhcCCCCcEEEEcCCCchhcHHHHHHHHhCCCe
Q 006864 305 TFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (628)
Q Consensus 305 ~l~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 338 (628)
.. .+...++++..+ ..+ +.+.+..++..+
T Consensus 78 ~~-~~g~k~v~~~~G---~~~-~e~~~~a~~~Gi 106 (122)
T 3ff4_A 78 IL-SLKPKRVIFNPG---TEN-EELEEILSENGI 106 (122)
T ss_dssp HH-HHCCSEEEECTT---CCC-HHHHHHHHHTTC
T ss_pred HH-hcCCCEEEECCC---CCh-HHHHHHHHHcCC
Confidence 22 234446666543 334 455555555444
No 477
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=91.99 E-value=0.22 Score=50.00 Aligned_cols=64 Identities=27% Similarity=0.228 Sum_probs=47.9
Q ss_pred CCeEEEEec-ChhHHHHHHHHHcCC-CEEEEECCCCChhH---HHHcCCccc--------CHHHHhccCCEEEEcCC
Q 006864 229 GKTLAVMGF-GKVGSEVARRAKGLG-MNVIAHDPYAPADK---ARAVGVELV--------SFDQALATADFISLHMP 292 (628)
Q Consensus 229 GktiGIIGl-G~IG~~vA~~l~~~G-~~V~~~d~~~~~~~---a~~~g~~~~--------sl~ell~~aDvV~l~~P 292 (628)
.|+|.|.|. |.||+.+++.|...| ++|.+.++...... ....+++.+ ++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999987 999999999999888 99999887653321 123344321 36678899999988765
No 478
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.94 E-value=0.17 Score=52.53 Aligned_cols=35 Identities=29% Similarity=0.263 Sum_probs=32.1
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.|+++.|+|. |.||..+++.++.+|++|++.++..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~ 201 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE 201 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999 9999999999999999999998763
No 479
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=91.89 E-value=0.15 Score=46.31 Aligned_cols=59 Identities=15% Similarity=0.269 Sum_probs=41.6
Q ss_pred cEEEEeccCCCCchhhHHhhhhcCCccccceEEeeeecCccEEEEEEeCCCCCHHHHHHHhcc
Q 006864 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEEPNQDSLKEIGKV 621 (628)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INIa~m~v~R~~~gg~Al~~i~vD~~~~~~~l~~L~~l 621 (628)
+.+.+.-+|+||++++|.+.|+++||||..+.+....+ .++..+..++ ++.+.+.|++.
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~--~~~~~~~~~d--~~~a~~~L~~~ 65 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENAD--FGILRGIVSD--PDKAYKALKDN 65 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSS--CEEEEEEESC--HHHHHHHHHHT
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCC--CCEEEEEeCC--HHHHHHHHHHc
Confidence 45666778999999999999999999999998864322 2444444432 35556656543
No 480
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=91.82 E-value=0.16 Score=52.98 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=63.0
Q ss_pred CeEEEEecChhHHHHHHHHHcC--------CCEEEE-ECCCCChhH--------HH---HcCCc-c-c---CHHHHh-cc
Q 006864 230 KTLAVMGFGKVGSEVARRAKGL--------GMNVIA-HDPYAPADK--------AR---AVGVE-L-V---SFDQAL-AT 283 (628)
Q Consensus 230 ktiGIIGlG~IG~~vA~~l~~~--------G~~V~~-~d~~~~~~~--------a~---~~g~~-~-~---sl~ell-~~ 283 (628)
.++||||+|.||+.+++.++.. +++|.+ +|+...... .. ..++. . . ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 3799999999999999998653 367654 576531110 11 11221 1 2 788888 36
Q ss_pred CCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCCCchh-cHHHHHHHHhCC
Q 006864 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI-DEEALVRALDSG 336 (628)
Q Consensus 284 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~v-de~aL~~aL~~g 336 (628)
.|+|+.++|-. .+.+.--+-..+.|+.|.-+|.+.-..+. ..+.|.++.++.
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~ 139 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSN 139 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHc
Confidence 89999999964 22222122344456777777765333332 335666655543
No 481
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.80 E-value=0.1 Score=55.46 Aligned_cols=46 Identities=30% Similarity=0.349 Sum_probs=37.6
Q ss_pred cCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC-ChhHHHHcCCc
Q 006864 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVE 273 (628)
Q Consensus 228 ~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~g~~ 273 (628)
.|.++.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|+.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 232 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE 232 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc
Confidence 47899999999999999999999999 999998764 23445566653
No 482
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.77 E-value=0.21 Score=51.20 Aligned_cols=67 Identities=18% Similarity=0.254 Sum_probs=47.1
Q ss_pred eecCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCCh--hHHH---H-------cCCccc--------CHHHHhccC
Q 006864 226 SLVGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPA--DKAR---A-------VGVELV--------SFDQALATA 284 (628)
Q Consensus 226 ~l~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~---~-------~g~~~~--------sl~ell~~a 284 (628)
.+.+|+|.|.| .|.||+.+++.|...|.+|++.++.... .... . .+++.+ +++++++.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 35689999999 5999999999999999999999876421 1111 1 222211 256677788
Q ss_pred CEEEEcCC
Q 006864 285 DFISLHMP 292 (628)
Q Consensus 285 DvV~l~~P 292 (628)
|+|+-+..
T Consensus 102 d~Vih~A~ 109 (351)
T 3ruf_A 102 DHVLHQAA 109 (351)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 88876654
No 483
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=91.76 E-value=0.11 Score=51.51 Aligned_cols=62 Identities=18% Similarity=0.241 Sum_probs=43.6
Q ss_pred eEEEEec-ChhHHHHHHHHHcC--CCEEEEECCCCCh-hHHHHcCCcc--------cCHHHHhccCCEEEEcCC
Q 006864 231 TLAVMGF-GKVGSEVARRAKGL--GMNVIAHDPYAPA-DKARAVGVEL--------VSFDQALATADFISLHMP 292 (628)
Q Consensus 231 tiGIIGl-G~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a~~~g~~~--------~sl~ell~~aDvV~l~~P 292 (628)
+|.|.|. |.||+.+++.|... |++|++.++.... ......++.. .+++++++.+|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4678886 99999999999988 9999998876432 1112234322 136678889999977654
No 484
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=91.67 E-value=0.17 Score=55.10 Aligned_cols=62 Identities=16% Similarity=0.197 Sum_probs=0.0
Q ss_pred eEEEEecChhHHHHHHHHHc----------CCCEEEE-ECCCCChhHHHHcCCccc-CHHHHhc--cCCEEEEcCC
Q 006864 231 TLAVMGFGKVGSEVARRAKG----------LGMNVIA-HDPYAPADKARAVGVELV-SFDQALA--TADFISLHMP 292 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~----------~G~~V~~-~d~~~~~~~a~~~g~~~~-sl~ell~--~aDvV~l~~P 292 (628)
+|||||+|.||+.+++.++. .+.+|.+ +|+..........+.... ++++++. +.|+|+.++|
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp 87 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIG 87 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCC
No 485
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=91.58 E-value=0.14 Score=45.90 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=44.4
Q ss_pred CCeEEEEecChhHHHHHHHHHcC-CCEEEEE-CCCCChhHHHHcCCccc---CHHHHhc--cCCEEEEcCCCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGL-GMNVIAH-DPYAPADKARAVGVELV---SFDQALA--TADFISLHMPLN 294 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~~~a~~~g~~~~---sl~ell~--~aDvV~l~~Plt 294 (628)
.+++.|+|.|..|+.+++.++.. |+++++| |.........-.|+... ++.++++ ..|.|++++|..
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCCCC
Confidence 56899999999999999999754 8998876 64421110011233322 4556554 578999999854
No 486
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=91.57 E-value=0.21 Score=50.61 Aligned_cols=63 Identities=13% Similarity=0.277 Sum_probs=46.2
Q ss_pred CeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCC-hhH----HHHcCCccc--------CHHHHhccCCEEEEcCC
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAP-ADK----ARAVGVELV--------SFDQALATADFISLHMP 292 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~----a~~~g~~~~--------sl~ell~~aDvV~l~~P 292 (628)
++|.|.| .|.||+.+++.|...|++|.+.++... ... ....+++.+ ++.++++.+|+|+.+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 6899999 599999999999999999999887653 111 123354322 36677888999887765
No 487
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.57 E-value=0.12 Score=56.62 Aligned_cols=64 Identities=17% Similarity=0.279 Sum_probs=47.8
Q ss_pred CCeEEEEecChhHHHHHHHHHcCCCEEEEECCCCCh-hH-HHHcCCccc-----C---HHHH-hccCCEEEEcCC
Q 006864 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DK-ARAVGVELV-----S---FDQA-LATADFISLHMP 292 (628)
Q Consensus 229 GktiGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~-a~~~g~~~~-----s---l~el-l~~aDvV~l~~P 292 (628)
.++|-|+|+|++|+.+|+.|...|++|.+.|..... +. ...+++..+ + |+++ +++||+++.+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence 468999999999999999999999999999987422 22 234455322 2 4443 688999987776
No 488
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=91.52 E-value=0.21 Score=52.28 Aligned_cols=31 Identities=26% Similarity=0.541 Sum_probs=25.4
Q ss_pred eEEEEecChhHHHHHHHHHcC-CCEEEEECCC
Q 006864 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAHDPY 261 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~ 261 (628)
++||+|+|+||+.+.+.|... .++|.+....
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 799999999999999998754 5788776433
No 489
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.48 E-value=0.27 Score=52.91 Aligned_cols=87 Identities=21% Similarity=0.215 Sum_probs=60.8
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC-ChhHHHHcCCccc-CH------------------------H--
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SF------------------------D-- 278 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-sl------------------------~-- 278 (628)
.|+++.|+|. |.||...++.++.+|.+|++.++.. ..+.++++|+..+ +. +
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV 299 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence 5899999998 9999999999999999999987653 2344566776422 11 1
Q ss_pred -HHh-ccCCEEEEcCCCCccccccccHHHHhcCCCCcEEEEcCC
Q 006864 279 -QAL-ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 279 -ell-~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR 320 (628)
++. ...|+|+-++.. + .-...+..|+++..+++++.
T Consensus 300 ~~~~g~g~Dvvid~~G~--~----~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 300 VEKAGREPDIVFEHTGR--V----TFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHSSCCSEEEECSCH--H----HHHHHHHHSCTTCEEEESCC
T ss_pred HHHhCCCceEEEECCCc--h----HHHHHHHHHhcCCEEEEEec
Confidence 111 247888877652 1 12456677888888888863
No 490
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.44 E-value=0.17 Score=52.86 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=31.9
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.|+++.|+| .|.||..+++.++..|++|++.++..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~ 197 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ 197 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 478999999 79999999999999999999998763
No 491
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=91.44 E-value=0.49 Score=47.56 Aligned_cols=66 Identities=18% Similarity=0.283 Sum_probs=48.4
Q ss_pred CCeEEEEe-cChhHHHHHHHHHcCCCEEEEECCCCC---hhHH------HHcCCccc--------CHHHHhccCCEEEEc
Q 006864 229 GKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAP---ADKA------RAVGVELV--------SFDQALATADFISLH 290 (628)
Q Consensus 229 GktiGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~---~~~a------~~~g~~~~--------sl~ell~~aDvV~l~ 290 (628)
.++|.|.| .|.||+.+++.|...|++|.+.++... .+.. ...+++.+ ++.++++.+|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 47899998 599999999999999999999988642 2221 12344322 366788899999887
Q ss_pred CCCC
Q 006864 291 MPLN 294 (628)
Q Consensus 291 ~Plt 294 (628)
+...
T Consensus 84 a~~~ 87 (313)
T 1qyd_A 84 LAGG 87 (313)
T ss_dssp CCCS
T ss_pred Cccc
Confidence 7643
No 492
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.28 E-value=0.32 Score=50.96 Aligned_cols=45 Identities=22% Similarity=0.381 Sum_probs=36.5
Q ss_pred cCCeEEEEe-cChhHHHHHHHHHc-CCCEEEEECCCC-ChhHHHHcCC
Q 006864 228 VGKTLAVMG-FGKVGSEVARRAKG-LGMNVIAHDPYA-PADKARAVGV 272 (628)
Q Consensus 228 ~GktiGIIG-lG~IG~~vA~~l~~-~G~~V~~~d~~~-~~~~a~~~g~ 272 (628)
.|.++.|+| .|.||...++.++. .|.+|++.++.. ..+.++++|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa 218 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA 218 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC
Confidence 578999999 99999999999998 589999999864 3344555664
No 493
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.27 E-value=0.17 Score=52.24 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=31.7
Q ss_pred cCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 228 ~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.|+++.|+|. |.||..+++.++..|++|++.++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~ 180 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE 180 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999995 9999999999999999999998763
No 494
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=91.27 E-value=0.18 Score=49.86 Aligned_cols=37 Identities=30% Similarity=0.351 Sum_probs=31.2
Q ss_pred ecCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCCC
Q 006864 227 LVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAP 263 (628)
Q Consensus 227 l~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~ 263 (628)
-.||++.|.|. |.||+++|++|...|++|++.++...
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 34789999985 68999999999999999999987753
No 495
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=91.25 E-value=0.18 Score=52.89 Aligned_cols=29 Identities=31% Similarity=0.582 Sum_probs=24.7
Q ss_pred eEEEEecChhHHHHHHHHHcC-CCEEEEEC
Q 006864 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAHD 259 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~-G~~V~~~d 259 (628)
+|||+|+|+||+.+.+.|... .++|.+.+
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain 32 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVN 32 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEe
Confidence 799999999999999998765 57887654
No 496
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.25 E-value=0.17 Score=52.17 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=33.2
Q ss_pred eeecCCeEEEEecChhHHHHHHHHHcCCC-EEEEECCCC
Q 006864 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA 262 (628)
Q Consensus 225 ~~l~GktiGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~ 262 (628)
..|++++|.|||+|.+|..+|+.|...|. ++..+|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 35899999999999999999999998885 788888653
No 497
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=91.20 E-value=0.078 Score=55.58 Aligned_cols=86 Identities=10% Similarity=0.081 Sum_probs=49.9
Q ss_pred CeEEEEe-cChhHHHHHHHHHcC---CCEEEEEC-CCCC-hhH-HHHcCCcccCHH-HHhccCCEEEEcCCCCccccccc
Q 006864 230 KTLAVMG-FGKVGSEVARRAKGL---GMNVIAHD-PYAP-ADK-ARAVGVELVSFD-QALATADFISLHMPLNPTTSKIF 301 (628)
Q Consensus 230 ktiGIIG-lG~IG~~vA~~l~~~---G~~V~~~d-~~~~-~~~-a~~~g~~~~sl~-ell~~aDvV~l~~Plt~~t~~li 301 (628)
.++||+| +|.||+.+.+.|... .+++.++. +... ... .....+...+++ +.+..+|+|+.|+|... ++..
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~-s~~~- 81 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGEL-SAKW- 81 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHH-HHHH-
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchH-HHHH-
Confidence 5799999 999999999998765 36766654 3211 100 000011111221 24468999999998432 1111
Q ss_pred cHHHHhcCCCCcEEEEcCC
Q 006864 302 NDETFAKMKKGVRIVNVAR 320 (628)
Q Consensus 302 ~~~~l~~mk~gailIN~aR 320 (628)
.-..++.|+.+|+.+.
T Consensus 82 ---a~~~~~~G~~vId~s~ 97 (336)
T 2r00_A 82 ---APIAAEAGVVVIDNTS 97 (336)
T ss_dssp ---HHHHHHTTCEEEECSS
T ss_pred ---HHHHHHcCCEEEEcCC
Confidence 1112466888888763
No 498
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.08 E-value=0.25 Score=52.81 Aligned_cols=66 Identities=15% Similarity=0.067 Sum_probs=51.5
Q ss_pred eecCCeEEEEecCh----------hHHHHHHHHHcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEcCC
Q 006864 226 SLVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMP 292 (628)
Q Consensus 226 ~l~GktiGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-sl~ell~~aDvV~l~~P 292 (628)
.+.|++|+|+|+-- =...+++.|+..|.+|.+|||..+..+ ...+..++ +++++++.||+|+++..
T Consensus 306 ~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~d~~v~~~~ 382 (402)
T 1dlj_A 306 ESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLE-SEDQSVLVNDLENFKKQANIIVTNRY 382 (402)
T ss_dssp CCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCC-TTCCSEECCCHHHHHHHCSEEECSSC
T ss_pred CCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCCCChHH-HHcCCeecCCHHHHHhCCcEEEEecC
Confidence 58899999999842 467899999999999999999864321 11344433 68999999999999665
No 499
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.07 E-value=0.63 Score=47.06 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=33.7
Q ss_pred eeecCCeEEEEec-ChhHHHHHHHHHcCCCEEEEECCCC
Q 006864 225 VSLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA 262 (628)
Q Consensus 225 ~~l~GktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 262 (628)
.++.||++.|.|- |.||+++|++|...|++|++.++..
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4688999999975 7899999999999999999988764
No 500
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=91.06 E-value=0.15 Score=54.00 Aligned_cols=30 Identities=27% Similarity=0.451 Sum_probs=24.2
Q ss_pred eEEEEecChhHHHHHHHHHcC----CCEEEE-ECC
Q 006864 231 TLAVMGFGKVGSEVARRAKGL----GMNVIA-HDP 260 (628)
Q Consensus 231 tiGIIGlG~IG~~vA~~l~~~----G~~V~~-~d~ 260 (628)
++||||+|.||+.+++.++.. +++|.+ +|+
T Consensus 6 ~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 799999999999999999864 356654 464
Done!