Query 006865
Match_columns 628
No_of_seqs 216 out of 1260
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 11:00:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006865.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006865hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e0w_A Gamma-glutamyltranspept 100.0 1E-150 5E-155 1259.9 51.4 529 68-628 17-556 (556)
2 2nlz_A Cephalosporin acylase; 100.0 5E-146 2E-150 1220.9 55.8 511 68-628 16-539 (547)
3 2i3o_A Gamma-glutamyltransfera 100.0 2E-142 6E-147 1186.6 46.1 501 68-628 5-515 (516)
4 2v36_A Gamma-glutamyltranspept 100.0 2E-101 7E-106 827.5 34.4 355 68-427 13-375 (376)
5 2qmc_A GGT, gamma-glutamyltran 100.0 3.5E-95 1.2E-99 777.2 33.3 333 69-404 29-369 (377)
6 2dg5_A Gamma-glutamyltranspept 100.0 2E-94 6.9E-99 770.4 30.5 332 68-402 17-356 (366)
7 3g9k_L Capsule biosynthesis pr 100.0 2.1E-89 7.1E-94 718.0 28.7 298 70-391 15-314 (323)
8 2dg5_B Gamma-glutamyltranspept 100.0 7.2E-61 2.4E-65 469.4 21.4 188 412-628 1-190 (190)
9 2qmc_B GGT, gamma-glutamyltran 100.0 9.6E-59 3.3E-63 453.4 20.6 184 412-622 1-187 (188)
10 2v36_B Gamma-glutamyltranspept 100.0 6.9E-58 2.4E-62 448.3 17.5 179 412-628 1-180 (193)
11 3g9k_S Capsule biosynthesis pr 100.0 5.6E-55 1.9E-59 423.0 18.7 171 412-626 1-174 (177)
12 1apy_A Aspartylglucosaminidase 90.6 0.4 1.4E-05 45.3 6.4 43 81-123 12-55 (162)
13 1k2x_A Putative L-asparaginase 84.9 1 3.6E-05 43.0 5.4 40 83-122 32-71 (177)
14 1p4k_A N(4)-(beta-N-acetylgluc 84.2 1.4 4.8E-05 45.4 6.3 45 78-123 8-56 (295)
15 2gez_A L-asparaginase alpha su 84.0 1.2 4.1E-05 43.3 5.4 39 84-122 36-74 (195)
16 4gdv_A L-asparaginase; NTN enz 83.6 1.1 3.9E-05 46.4 5.4 41 83-123 30-70 (310)
17 3c17_A L-asparaginase precurso 73.2 3.6 0.00012 42.8 5.4 40 83-122 32-71 (320)
18 2a8j_A Taspase 1, threonine as 69.4 4.8 0.00016 43.4 5.4 39 84-123 67-106 (420)
19 4gdv_A L-asparaginase; NTN enz 64.7 30 0.001 35.7 10.1 26 408-433 166-191 (310)
20 3cuq_A Vacuolar-sorting protei 41.8 8.2 0.00028 38.4 1.3 71 210-291 23-102 (234)
21 1u5t_A Appears to BE functiona 41.5 16 0.00054 36.3 3.3 32 261-293 88-123 (233)
22 3c17_A L-asparaginase precurso 36.7 63 0.0022 33.4 7.1 26 408-433 174-199 (320)
23 1p4k_A N(4)-(beta-N-acetylgluc 33.2 68 0.0023 32.8 6.6 26 408-433 148-173 (295)
24 1apy_B Aspartylglucosaminidase 27.4 51 0.0017 30.2 4.0 22 412-433 1-22 (141)
25 1u5t_B Defective in vacuolar p 26.9 20 0.00068 33.7 1.2 27 263-290 11-46 (169)
26 2gez_B L-asparaginase beta sub 26.1 57 0.0019 29.5 4.0 22 412-433 1-22 (133)
27 1k2x_B Putative L-asparaginase 26.0 55 0.0019 30.0 3.9 22 412-433 1-22 (143)
28 3gxq_A Putative regulator of t 24.1 25 0.00084 25.8 1.0 15 82-96 35-49 (54)
29 3cuq_B Vacuolar protein-sortin 22.0 26 0.0009 34.2 1.0 29 262-291 71-103 (218)
30 2q6k_A Chlorinase; complex wit 21.3 46 0.0016 33.9 2.7 34 410-447 63-100 (283)
31 2a8j_A Taspase 1, threonine as 20.7 68 0.0023 34.5 4.0 26 409-434 231-256 (420)
No 1
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=100.00 E-value=1.4e-150 Score=1259.86 Aligned_cols=529 Identities=35% Similarity=0.556 Sum_probs=455.5
Q ss_pred CCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCCCeEEEEEecCCCCeeEEeeeccccc
Q 006865 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (628)
Q Consensus 68 ~~~~~~~~gaVas~~~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGGggf~lv~~~~~g~~~~id~re~AP~ 147 (628)
++++.+++|||+|+||+||++|++||++||||||||||+++||+||||++||||||+|||||+ +++++++|||||+||+
T Consensus 17 ~~~v~~~~g~Vas~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~-~~~~~~~id~re~AP~ 95 (556)
T 2e0w_A 17 FHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRS-KNGNTTAIDFREMAPA 95 (556)
T ss_dssp SCCEEESSCEEEESSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCC
T ss_pred cCceeccceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCcc
Confidence 456778999999999999999999999999999999999999999999999999999999997 7899999999999999
Q ss_pred CCChhhhhcC-----CCCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhcCcccCHHHHHHHHHhhhhhc
Q 006865 148 AASQDMYENN-----PGANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRIL 222 (628)
Q Consensus 148 ~a~~~~~~~~-----~~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~ 222 (628)
+++++||.+. +..+..|++||+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.|.
T Consensus 96 ~at~d~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~V~~~la~~~~~~~~~l~ 175 (556)
T 2e0w_A 96 KATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVL 175 (556)
T ss_dssp C--------------------CCCCCCBCCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHHS
T ss_pred cCCHhHHhhccCCcCCccccCCccccccchhHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHhHHHhh
Confidence 9999999643 33457899999999999999999999999999999999999999999999999999998888898
Q ss_pred CCcccccccc-cCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhcCCceEEEcCeE
Q 006865 223 NDRGLQEVFA-PNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVS 301 (628)
Q Consensus 223 ~~p~~~~~f~-~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~ 301 (628)
.+|+++++|+ |+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+
T Consensus 176 ~~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 255 (556)
T 2e0w_A 176 PNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS 255 (556)
T ss_dssp TTSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHHSHHHHHHHHHHHHSSCCCCHHHHHTCCCEEECCEE
T ss_pred cCchHHHhccCCCCccCCCCCEeeCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCcCHHHHhhCCcceeCceE
Confidence 9999999998 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCeEEecCCCCCCcHHHHHHHHHHHhcCCCCCC-CCchhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHHhhcCH
Q 006865 302 VNVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSDS-AKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSL 379 (628)
Q Consensus 302 ~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~-~~~~~~~H~liEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls~ 379 (628)
++|+||+||++||||||+++++++|||||+|++... ..+++++|+++||+|+||+||. ++|||+|++++ +++|||+
T Consensus 256 ~~yrg~~v~~~pPpssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls~ 333 (556)
T 2e0w_A 256 GDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALTNK 333 (556)
T ss_dssp EEETTEEEEECCTTBSSHHHHHHHHHHHHTSCSSSSCTTCHHHHHHHHHHHHHHHHHHGGGC-------CC--GGGGGCH
T ss_pred EEeCCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhcCH
Confidence 999999999999999998888899999999998753 4578999999999999999998 69999999887 7999999
Q ss_pred HHHHHHHhhcCCCCCCCCCccccccc-cCCCCCceEEEEEcCCCCEEEEEeccCCCCCceeeeCCcceeeccCCCCccC-
Q 006865 380 SFAKQIQQKIFDNTTFPPDYYMNRWS-QLRDHGTSHFCIVDAERNAVSMTTTVNYPFGAGILSPSTGIVLNNEMGDFSI- 457 (628)
Q Consensus 380 ~~a~~~~~~I~~~~~~~~~~~~~~~~-~~~~~~Tth~sVvD~~GnaVS~T~Sin~~FGSgv~~p~tGi~lNN~m~dFs~- 457 (628)
+|+++++++|+++++.++.+|.+... ..++++||||||+|++||+||+|+|+|..||||+++|+|||+|||||+|||+
T Consensus 334 ~ya~~~~~~I~~~~a~~~~~~~~~~~~~~~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lNN~~~dFs~~ 413 (556)
T 2e0w_A 334 AYAKSIADQIDINKAKPSSEIRPGKLAPYESNQATHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAK 413 (556)
T ss_dssp HHHHHHHHHCCSSCCCCHHHHSCC--CCCCCSCCEEEEEECTTCCEEEEEEECSSTTTTSCBCGGGCCBCCCCC------
T ss_pred HHHHHHHHhcCccccCCccccCCCCCCCCCCCCCEEEEEEcCCCCEEEEeccCCCCcCCeEEcCCCceEecCCCCCcCCC
Confidence 99999999999998877665554332 1245899999999999999999999999999999999999999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCcceEeccCCceeEEecCCCccchHHHHHHHHHHHHHcCCCHHHHhhCCccccc
Q 006865 458 PTENPPDMLPPTPANFIKPNKRPLSSMTPLIITKDNQLAGVIGGSGGLHIIPAVIQVFLNHFIFGIESLAAVQNPRVYHK 537 (628)
Q Consensus 458 ~~~~n~~~~~p~~~N~i~PGKRP~ssmsPtiv~k~g~~~l~~Ga~GG~~i~~av~Qvll~~l~~gm~l~~AI~aPR~h~q 537 (628)
|+.+|.||++++++|+|+|||||+|||+|+||+++|+++|++|+|||++|||+++|+|+|+++|||++||||++||||||
T Consensus 414 pg~~n~~gl~~~~~N~i~PgKRP~ssm~Ptiv~~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~ 493 (556)
T 2e0w_A 414 PGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNVAEATNAPRFHHQ 493 (556)
T ss_dssp ---------------------CCCBCCCCEEEEETTEEEEEECCCSTTHHHHHHHHHHHHHHTSCCCHHHHHHSCCEECC
T ss_pred CCCCccccCCCCcccccCCCCCccccCCCeEEEeCCcEEEEEECCChHHHHHHHHHHHHHHHhcCCCHHHHHhcCEEeec
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEcccccccCCcCCCCHHHHHHHHHcCCeeeeecCcceEEEEEeccCCChhhhhhhhhhcCCccccCcEEEEee
Q 006865 538 VIPNVVMYENWTVIDGDHIELADETKLFLEERRHQLEGRAGGAIVQLIVQTLGNPINEAQKLRKYMGNAQVLHGILTAVS 617 (628)
Q Consensus 538 ~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh~v~~~~~~~~~q~i~~~~~~~~~~~r~~~~~~~~~~~~~G~l~g~s 617 (628)
+.|+.+.+|. ++++++++.|+++||+++....+|.+|+|.++ .+|.++|+|
T Consensus 494 ~~p~~~~~E~---------~~~~~~~~~L~~~Gh~v~~~~~~g~~qaI~~~--------------------~~g~~~g~s 544 (556)
T 2e0w_A 494 WLPDELRVEK---------GFSPDTLKLLEAKGQKVALKEAMGSTQSIMVG--------------------PDGELYGAS 544 (556)
T ss_dssp TTTTCEEECS---------CSCHHHHHHHHHTTCCEEECSCCCCCEEEEEC--------------------TTSCEEEEE
T ss_pred CCCCeEEECC---------CCCHHHHHHHHhCCCeeEEcCCCceEEEEEEe--------------------CCCeEEEEe
Confidence 9999999999 89999999999999999877667889999875 268899999
Q ss_pred cCCCCC-ccccC
Q 006865 618 DPRKDG-RPAAV 628 (628)
Q Consensus 618 DpR~~G-~a~g~ 628 (628)
||||+| .++||
T Consensus 545 DpR~~G~~a~g~ 556 (556)
T 2e0w_A 545 DPRSVDDLTAGY 556 (556)
T ss_dssp CTTSTTCEEEEC
T ss_pred CCCCCCCCCccC
Confidence 999988 68887
No 2
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=100.00 E-value=5.2e-146 Score=1220.93 Aligned_cols=511 Identities=27% Similarity=0.436 Sum_probs=476.1
Q ss_pred CCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCCCeEEEEEecCCCCeeEEeeeccccc
Q 006865 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (628)
Q Consensus 68 ~~~~~~~~gaVas~~~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGGggf~lv~~~~~g~~~~id~re~AP~ 147 (628)
|+++.+++|||||+||+||++|++||++||||||||||+++||+||||++||||||+|||||+. + ++++||+||+||+
T Consensus 16 r~~v~~~~g~Vas~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~~-~-~~~~id~re~AP~ 93 (547)
T 2nlz_A 16 RNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTK-G-KLHGLNGSGRAPM 93 (547)
T ss_dssp CCCEEESSEEEEESSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTSCCTBCEEEEEEEET-T-EEEEEEECCCCCT
T ss_pred CCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEEC-C-ceEEEecccCCcc
Confidence 6788899999999999999999999999999999999999999999999999999999999974 4 8999999999999
Q ss_pred CCChhhhhcCC---CCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhcCcccCHHHHHHHHHhhhhhcCC
Q 006865 148 AASQDMYENNP---GANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRILND 224 (628)
Q Consensus 148 ~a~~~~~~~~~---~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~~~ 224 (628)
+++++||.+.. ..+..|++||+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.|.++
T Consensus 94 ~a~~~~~~~~g~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~ 173 (547)
T 2nlz_A 94 SLTMEAVKAKGYEQELPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKTE 173 (547)
T ss_dssp TCCHHHHHTTTCCSSCCSSSSTTCCCCCHHHHHHHHHHHHCSSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhhcCCCccCCCCCCcccccchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcC
Confidence 99999997542 467899999999999999999999999999999999999999999999999999999888888888
Q ss_pred cc------cccccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhcCCceEEEc
Q 006865 225 RG------LQEVFAPNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVD 298 (628)
Q Consensus 225 p~------~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~ 298 (628)
|+ ++++|+|+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++
T Consensus 174 p~~~~~~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~ 253 (547)
T 2nlz_A 174 WTDDVYQPWFDTFAPKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLACYRPEWVE 253 (547)
T ss_dssp CCSSTTHHHHHHHCTTSSCCCTTCEECCHHHHHHHHHHHTTTTHHHHHSHHHHHHHHHHHHTTCCCCHHHHHTCCCEEEC
T ss_pred CcccchhhHHHHcccCCccCCCCCEecCHHHHHHHHHHHHhCchhhcCCHHHHHHHHHHHhcCCCCCHHHHhhCCceeeC
Confidence 98 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeeCCeEEecCCCCCCcHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHHhhc
Q 006865 299 AVSVNVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSDSAKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEML 377 (628)
Q Consensus 299 Pl~~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~~~~~~~~H~liEa~k~a~a~R~-~lgDP~f~~v~~~~~~ll 377 (628)
||+++|+||+||++||||||.+ ++++|||||+|++.. ..+++++|+++||+|+||+||. ++|||+|++++ +++||
T Consensus 254 Pl~~~yrg~~v~~~pPps~G~~-~l~~L~iLe~~~l~~-~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Ll 329 (547)
T 2nlz_A 254 PISIDYRGYRVWEIPPNGQGLV-ALEALNIVKGFEFYH-KDTVDTYHKQIEAMKLAFVDGMKYVTEPSDMSVS--VEQLL 329 (547)
T ss_dssp CEEEEETTEEEEECCTTBTTHH-HHHHHHHHTTSCCSC-SSSHHHHHHHHHHHHHHHHHHHHHCSSGGGCSSC--HHHHT
T ss_pred CeEEEeCCceEEECCCCcHHHH-HHHHHHHHhcCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhc
Confidence 9999999999999999999966 559999999999876 6678999999999999999997 79999999987 89999
Q ss_pred CHHHHHHHHhhcCCCCCCCCCccccccccCCCCCceEEEEEcCCCCEEEEEeccCCCCCceeeeCCcceeeccCCCCccC
Q 006865 378 SLSFAKQIQQKIFDNTTFPPDYYMNRWSQLRDHGTSHFCIVDAERNAVSMTTTVNYPFGAGILSPSTGIVLNNEMGDFSI 457 (628)
Q Consensus 378 s~~~a~~~~~~I~~~~~~~~~~~~~~~~~~~~~~Tth~sVvD~~GnaVS~T~Sin~~FGSgv~~p~tGi~lNN~m~dFs~ 457 (628)
|++|+++++++|+++ +.++.+.. .++++||||||+|++||+||+|+|+|..||||+++|+|||+|||||++|++
T Consensus 330 s~~ya~~~~~~I~~~-a~~~~~~~-----p~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~pgtGi~LNN~~~~Fs~ 403 (547)
T 2nlz_A 330 SDEYATERRKEIGEQ-ALTPEPGT-----PPRGGTVYLATADGDGNMVSFIQSNYMGFGSGVVVPGTGIAMQNRGHNFSL 403 (547)
T ss_dssp CHHHHHHHHTTCCSS-CCCCCCCC-----C----CEEEEEEETTSCEEEEEEECSSTTCSSCEETTTTEEBCCGGGGSBC
T ss_pred CHHHHHHHHHhcccc-cCCCCCCC-----CCCCCCEEEEEEcCCCCEEEEEccCCCccCCeeecCCceEEeeCCCCCCCC
Confidence 999999999999987 55443221 246899999999999999999999999999999999999999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCcceEeccCCceeEEecCCCccchHHHHHHHHHHHHHcCCCHHHHhhCCccccc
Q 006865 458 PTENPPDMLPPTPANFIKPNKRPLSSMTPLIITKDNQLAGVIGGSGGLHIIPAVIQVFLNHFIFGIESLAAVQNPRVYHK 537 (628)
Q Consensus 458 ~~~~n~~~~~p~~~N~i~PGKRP~ssmsPtiv~k~g~~~l~~Ga~GG~~i~~av~Qvll~~l~~gm~l~~AI~aPR~h~q 537 (628)
. |+++|+++|||||+|||+|+||+++|+++|++|+|||++|||+++|+|+|+++|||++|+||++||||+|
T Consensus 404 ~---------p~~~N~i~PgKRP~ssm~Ptiv~~~g~~~l~~Gs~GG~~i~~~~~qvl~n~ld~gm~~q~Ai~aPR~~~~ 474 (547)
T 2nlz_A 404 D---------PNHDNALKPGKRTYHTIIPGFLTKNDQPIGPFGVMGGFMQPQGHMQVMMNTIDFGLNPQAALDAPRWQWT 474 (547)
T ss_dssp C---------TTSTTBCCTTCCCCBCCCCEEEEESSCEEEEEEECSGGGHHHHHHHHHHHHHTTCCCHHHHHHSCCEEEC
T ss_pred C---------CCCCCcCCCCCccccCCCCeEEEeCCceEEEEECCchHHHHHHHHHHHHHHHhcCCCHHHHHhCCEeeec
Confidence 3 5689999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCeEEEcccccccCCcCCCCHHHHHHHHHcCCeeeeecC---cceEEEEEeccCCChhhhhhhhhhcCCccccCcEEE
Q 006865 538 VIPNVVMYENWTVIDGDHIELADETKLFLEERRHQLEGRAG---GAIVQLIVQTLGNPINEAQKLRKYMGNAQVLHGILT 614 (628)
Q Consensus 538 ~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh~v~~~~~---~~~~q~i~~~~~~~~~~~r~~~~~~~~~~~~~G~l~ 614 (628)
.++.+.+|. ++++++++.|+++||+++.... +|.+|+|.++. .+|.++
T Consensus 475 -~~~~~~~E~---------~~~~~~~~~L~~~Gh~v~~~~~~~~~g~~qaI~~~~-------------------~~g~~~ 525 (547)
T 2nlz_A 475 -NGKQVQVEP---------TFPVDIAQALVRRGHKIQVVLDEGAFGRGQIIWRDP-------------------TTGVLA 525 (547)
T ss_dssp -SSSEEEECT---------TSCHHHHHHHHHTTCEEEECCCTTTTCCEEEEEECT-------------------TTCCEE
T ss_pred -CCCeEEecC---------CCCHHHHHHHHHCCCeeEeccCCCcCcEEEEEEEEC-------------------CCCEEE
Confidence 578999999 8999999999999999987653 68899998751 268899
Q ss_pred EeecCCCCCccccC
Q 006865 615 AVSDPRKDGRPAAV 628 (628)
Q Consensus 615 g~sDpR~~G~a~g~ 628 (628)
|+|||||+|.++||
T Consensus 526 g~sDpR~~G~a~g~ 539 (547)
T 2nlz_A 526 GGTEPRTDGQVAAW 539 (547)
T ss_dssp EEECTTSSCEEEEC
T ss_pred EEeCCCCCCeEEee
Confidence 99999999999886
No 3
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=100.00 E-value=1.6e-142 Score=1186.62 Aligned_cols=501 Identities=24% Similarity=0.369 Sum_probs=456.7
Q ss_pred CCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCCCeEEEEEecCCCCeeEEeeeccccc
Q 006865 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (628)
Q Consensus 68 ~~~~~~~~gaVas~~~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGGggf~lv~~~~~g~~~~id~re~AP~ 147 (628)
|+++.+++|||+|+||+||++|++||++||||||||||+++||+||||++||||||+|||||++ ++++++||+||+||+
T Consensus 5 r~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~~GiGGggf~lv~~~-~~~~~~id~r~~AP~ 83 (516)
T 2i3o_A 5 RPNALSQRSVIASSSELASLAGRDILKRGGNIFDAALAVSAMLCVTQNNLCGLGGDLFALIRDE-NGQIMDLNGSGQASR 83 (516)
T ss_dssp SCCEEESSEEEEESBHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTSCCTTSEEEEEEECT-TCCEEEEEECCCBCT
T ss_pred CCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEeC-CCcEEEEECCcCCcc
Confidence 6788999999999999999999999999999999999999999999999999999999999975 789999999999999
Q ss_pred CCChhhhhcC--CCCCCCCCCc-cccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhcCcccCHHHHHHHHHhhhhhcCC
Q 006865 148 AASQDMYENN--PGANYAGALS-MGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRILND 224 (628)
Q Consensus 148 ~a~~~~~~~~--~~~~~~G~~s-v~VPG~v~Gl~~a~~r~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~~~ 224 (628)
+++++||.+. ...+..|++| |+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.|.++
T Consensus 84 ~a~~~~~~~~g~~~~~~~G~~a~v~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~ 163 (516)
T 2i3o_A 84 AVSIDYYESMGLTKIPERGPYAAITVPGIAGSWDEIFRKFATMDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQY 163 (516)
T ss_dssp TCCHHHHHTTTCSSCCSSSTTTCCBCCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHhhcCCCcCCCCCCcccCcCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHhhcC
Confidence 9999999653 3567899999 999999999999999999999999999999999999999999999999888888899
Q ss_pred cccccccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhcCCceEEEcCeEEee
Q 006865 225 RGLQEVFAPNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVSVNV 304 (628)
Q Consensus 225 p~~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~~~~ 304 (628)
|+++++|+|+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+++|
T Consensus 164 ~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~~y 243 (516)
T 2i3o_A 164 RGWSSIFMPNGSVPVAGEILKQPDLAESFRLMSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTDL 243 (516)
T ss_dssp HHHHHHHSTTSSCCCTTCEECCHHHHHHHHHHHHHCTTHHHHSHHHHHHHHTTTTTCCCCCHHHHHHCCCEEECCEEEEE
T ss_pred hhHHhhhccCCccCCCCCEecCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCcHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHhhcCCCCCCCcchHHHhhcCHHHHHH
Q 006865 305 MGYTISGMPPPSCGTAGMAMVLNILDSYGSSDSAKGNLGLHRIIEALKHMFAARMNLGDPNFVNISSVLSEMLSLSFAKQ 384 (628)
Q Consensus 305 ~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~~~~~~~~H~liEa~k~a~a~R~~lgDP~f~~v~~~~~~lls~~~a~~ 384 (628)
+||+||++||||||.+ ++++|||||+|++.....+++++|+++||+|+||+||.++|||+|++++ +++| +|+++
T Consensus 244 rg~~v~~~pPps~G~~-~l~~L~iLe~~~~~~~~~~~~~~H~~~EA~k~A~adR~~lgDp~f~~vp--~~~L---~y~~~ 317 (516)
T 2i3o_A 244 DEFRIYETSPNSQGIT-VIEWIRGMESHGYDSRTMWEAKIEDIFETMEEAYDKRRKITDPSYMNIA--QHDS---ANGKK 317 (516)
T ss_dssp TTEEEEECCTTBTTHH-HHHHHHHHHHTTCCTTTGGGCCHHHHHHHHHHHHHHHTTCCCGGGTC----------------
T ss_pred CCeEEEECCCCcHHHH-HHHHHHhhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCccccccc--hHHH---HHHHh
Confidence 9999999999999966 5599999999998755456789999999999999999999999999886 6777 78877
Q ss_pred HHhhcCCCCCCCCCccccccccCCCCCceEEEEEcCCCCEEEEEeccCCCCCceeeeCCcceeeccCCCCccCCCCCCCC
Q 006865 385 IQQKIFDNTTFPPDYYMNRWSQLRDHGTSHFCIVDAERNAVSMTTTVNYPFGAGILSPSTGIVLNNEMGDFSIPTENPPD 464 (628)
Q Consensus 385 ~~~~I~~~~~~~~~~~~~~~~~~~~~~Tth~sVvD~~GnaVS~T~Sin~~FGSgv~~p~tGi~lNN~m~dFs~~~~~n~~ 464 (628)
+++.++. ..++++||||||+|++||+||+|+|+|..||||+++|+|||+|||||+||++.
T Consensus 318 -------~~a~~~~-------~~~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lnN~~~~Fs~~------ 377 (516)
T 2i3o_A 318 -------DGLPKRD-------HNDIGDTTYFSISDSEGRSVSIIQSNYMGFGSGIVPKGTGFVLQNRGSYFTLQ------ 377 (516)
T ss_dssp --------CCCBCC-------SCCCCEEEEEEEEETTSCEEEEEEEEESTTCSSCCCTTSCCCCCCGGGGSBCC------
T ss_pred -------ccccCCC-------CCCCCCCEEEEEEcCCCCEEEEeccCCCCcCCeeeeCCCceEEeCCCCccCCC------
Confidence 1222221 11458999999999999999999999999999999999999999999999963
Q ss_pred CCCCCCCCCCCCCCCCCCCCcceEeccCCceeEEecCCCccchHHHHHHHHHHHHHcCCCHHHHhhCCcccc----ccCC
Q 006865 465 MLPPTPANFIKPNKRPLSSMTPLIITKDNQLAGVIGGSGGLHIIPAVIQVFLNHFIFGIESLAAVQNPRVYH----KVIP 540 (628)
Q Consensus 465 ~~~p~~~N~i~PGKRP~ssmsPtiv~k~g~~~l~~Ga~GG~~i~~av~Qvll~~l~~gm~l~~AI~aPR~h~----q~~p 540 (628)
|+++|+++|||||+|||+|+||+++|+++|++|+|||++|||+++|+|+|+++|||++|+||++||||+ |+.|
T Consensus 378 ---p~~~N~i~PgKRP~ssm~Ptiv~~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~~~~~~~~ 454 (516)
T 2i3o_A 378 ---RDHPNALMPGKRTFHTLAACMVEKEHDLYASLGSMGGDIQPQVQMQILMEILKDNTDPQAILDKPRWTEPYTIYEAP 454 (516)
T ss_dssp ---TTSTTBCCTTCCCCBCCCCEEEEETTEEEEEEEECCSTTHHHHHHHHHHHHTTCCSCHHHHHHSCCEECCCCTTSBC
T ss_pred ---CCCCCcCCCCCCcccCCCCeEEEeCCceEEEEECCCcHHHHHHHHHHHHHHHhcCCCHHHHHhCCEEeeccccCCCC
Confidence 568999999999999999999999999999999999999999999999999999999999999999998 6788
Q ss_pred CeEEEcccccccCCcCCCCHHHHHHHHHcCCeeeeecC---cceEEEEEeccCCChhhhhhhhhhcCCccccCcEEEEee
Q 006865 541 NVVMYENWTVIDGDHIELADETKLFLEERRHQLEGRAG---GAIVQLIVQTLGNPINEAQKLRKYMGNAQVLHGILTAVS 617 (628)
Q Consensus 541 ~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh~v~~~~~---~~~~q~i~~~~~~~~~~~r~~~~~~~~~~~~~G~l~g~s 617 (628)
+.+.+|+. ++++++++.| +||+++.... ++.+|+|.++ .+|.++|++
T Consensus 455 ~~~~~E~~--------~~~~~~~~~L--~Gh~v~~~~~~~~~g~~qaI~~~--------------------~~g~~~g~s 504 (516)
T 2i3o_A 455 GAVYVESE--------ELYRNVSKQI--SGRKVVLRDVSQEFGTAQITTLI--------------------RGDVVVGAA 504 (516)
T ss_dssp CCEEESSH--------HHHHHHHHHS--CSCCEEECCSSGGGCCEEEEEEE--------------------GGGEEEEEE
T ss_pred CeEEEecC--------CCCHHHHHHh--CCCEEEecCCCCcCceEEEEEEe--------------------CCCeEEEEe
Confidence 99999972 4789999999 9999987653 6889999875 268999999
Q ss_pred cCCCCCccccC
Q 006865 618 DPRKDGRPAAV 628 (628)
Q Consensus 618 DpR~~G~a~g~ 628 (628)
||||+|.++||
T Consensus 505 DpR~~G~a~g~ 515 (516)
T 2i3o_A 505 DPRGDGIAIPY 515 (516)
T ss_dssp CTTTBCEEEEE
T ss_pred CCCCCCeeeee
Confidence 99999999886
No 4
>2v36_A Gamma-glutamyltranspeptidase large chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_A*
Probab=100.00 E-value=2e-101 Score=827.54 Aligned_cols=355 Identities=32% Similarity=0.518 Sum_probs=320.3
Q ss_pred CCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCCCeEEEEEecCCCCeeEEeeeccccc
Q 006865 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (628)
Q Consensus 68 ~~~~~~~~gaVas~~~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGGggf~lv~~~~~g~~~~id~re~AP~ 147 (628)
++++.+++|||+|+||+||++|++||++||||||||||+++||+||||++||||||+|||||+++++++++|||||+||+
T Consensus 13 ~~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~~~~~~~id~re~AP~ 92 (376)
T 2v36_A 13 KQVDVGKDGMVATAHPLASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGGFMMVYDGKTKDTTIIDSRERAPA 92 (376)
T ss_dssp CSBC-CCSEEEEBSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTTCSTTSEEEEEEECTTTCCEEEEECCCBCCT
T ss_pred CCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEECCCCcEEEEEeeccCcc
Confidence 45667899999999999999999999999999999999999999999999999999999999877899999999999999
Q ss_pred CCChhhhhcC--CCCC----CCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhcCcccCHHHHHHHHHhhhhh
Q 006865 148 AASQDMYENN--PGAN----YAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRI 221 (628)
Q Consensus 148 ~a~~~~~~~~--~~~~----~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l 221 (628)
+++++||.+. ...+ ..|++||+|||+|+||+++|+|||+|||++||+|||+|||+||+|++.++..|+...+.|
T Consensus 93 ~a~~~~~~~~~g~~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l 172 (376)
T 2v36_A 93 GATPDMFLDENGKAIPFSERVTKGTAVGVPGTLKGLEEALDKWGTRSMKQLITPSIKLAEKGFPIDSVLAEAISDYQEKL 172 (376)
T ss_dssp TCCTTTTBCSSSCBCCHHHHTTSGGGCCBCCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHH
T ss_pred cCCHhHhhhccCCcCCcccccCCCccccCchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHh
Confidence 9999999642 1233 689999999999999999999999999999999999999999999999999999888888
Q ss_pred cCCcccccccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhcCCceEEEcCeE
Q 006865 222 LNDRGLQEVFAPNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVS 301 (628)
Q Consensus 222 ~~~p~~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~ 301 (628)
.. |+++++|+|+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+
T Consensus 173 ~~-~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 251 (376)
T 2v36_A 173 SR-TAAKDVFLPNGEPLKEGDTLIQKDLAKTFKLIRSKGTDAFYKGKFAKTLSDTVQDFGGSMTEKDLENYDITIDEPIW 251 (376)
T ss_dssp TT-STTHHHHSTTSSCCCTTCEECCHHHHHHHHHHHHHCTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCEE
T ss_pred cC-hhHHHHhccCCccCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceE
Confidence 88 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCeEEecCCCCCCcHHHHHHHHHHHhcCCCCCC-CCchhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHHhhcCH
Q 006865 302 VNVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSDS-AKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSL 379 (628)
Q Consensus 302 ~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~-~~~~~~~H~liEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls~ 379 (628)
++|+||+||++||||||+++++++|||||+|++... ..+++++|+++||+|+||+||. ++|||+|++++ +++|||+
T Consensus 252 ~~yrg~~v~~~pPPssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls~ 329 (376)
T 2v36_A 252 GDYQGYQIATTPPPSSGGIFLLQMPKILDHFNLSQYDVRSWEKYQLLAETMHLSYADRASYAGDPEFVNVP--LKGLLHP 329 (376)
T ss_dssp EEETTEEEEECCTTBSHHHHHHHHHHHHHTTCCC--CTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHHCH
T ss_pred EEeCCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCCcHHHHHHHHHHHHHHHHHHHHhcCCcccccCC--HHHhcCH
Confidence 999999999999999998888899999999998753 4678999999999999999998 69999999987 8999999
Q ss_pred HHHHHHHhhcCCCCCCCCCccccccccCCCCCceEEEEEcCCCCEEEE
Q 006865 380 SFAKQIQQKIFDNTTFPPDYYMNRWSQLRDHGTSHFCIVDAERNAVSM 427 (628)
Q Consensus 380 ~~a~~~~~~I~~~~~~~~~~~~~~~~~~~~~~Tth~sVvD~~GnaVS~ 427 (628)
+|+++++++|++ +.++.+|.+......+++||||||+|++||+||.
T Consensus 330 ~y~~~~~~~I~~--~~~~~~~~~~~~~~~~~~Tth~svvD~~GnaVS~ 375 (376)
T 2v36_A 330 DYIKERQQLINL--DQVNKKPKAGDPWKYQEGSANYKQVEQPKDKVEG 375 (376)
T ss_dssp HHHHHHHHTCBT--TBCCSSCCCCCGGGGSSSCCSSCCCCC-------
T ss_pred HHHHHHHHhccc--cccccccCCCCCCCCCCCCEEEEEEcCCCCeEeC
Confidence 999999999998 4444445443322224899999999999999985
No 5
>2qmc_A GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_A* 3fnm_A* 2nqo_A
Probab=100.00 E-value=3.5e-95 Score=777.17 Aligned_cols=333 Identities=32% Similarity=0.549 Sum_probs=313.7
Q ss_pred CcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCCCeEEEEEecCCCCeeEEeeecccccC
Q 006865 69 DIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPLA 148 (628)
Q Consensus 69 ~~~~~~~gaVas~~~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGGggf~lv~~~~~g~~~~id~re~AP~~ 148 (628)
+...+++|||+|+||+||++|++||++||||||||||+++||+||||++||||||+|||||+ +++++++|||||+||++
T Consensus 29 p~~~~~~g~Vas~~plAs~aG~~IL~~GGNAvDAAVAaa~~L~VveP~~sGiGGggF~li~~-~~~~~~~id~re~AP~~ 107 (377)
T 2qmc_A 29 PIKNTKVGLALSSHPLASEIGQKVLEEGGNAIDAAVAIGFALAVVHPAAGNIGGGGFAVIHL-ANGENVALDFREKAPLK 107 (377)
T ss_dssp -CEESSSEEEECSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCTT
T ss_pred CccccCceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCccc
Confidence 46678899999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred CChhhhhcC-----CCCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhcCcccCHHHHHHHHHhhhhhcC
Q 006865 149 ASQDMYENN-----PGANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRILN 223 (628)
Q Consensus 149 a~~~~~~~~-----~~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~~ 223 (628)
++.+||.+. +..+..|+++|+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.|..
T Consensus 108 at~d~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~ 187 (377)
T 2qmc_A 108 ATKNMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLIDPAIKLAENGYAISQRQAETLKEARERFLK 187 (377)
T ss_dssp CCTTTTBCTTSCBCTTTTTSSGGGCCBCCHHHHHHHHHHHHCCSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHhhccCCcCCccccCCCcccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHhc
Confidence 999999753 345678999999999999999999999999999999999999999999999999999988888889
Q ss_pred Cccccccccc-CCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhcCCceEEEcCeEE
Q 006865 224 DRGLQEVFAP-NGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVSV 302 (628)
Q Consensus 224 ~p~~~~~f~~-~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~~ 302 (628)
+|+++++|+| +|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||++
T Consensus 188 ~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~ 267 (377)
T 2qmc_A 188 YSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELIEKDMKKNGGIITKEDLASYNVKWRKPVVG 267 (377)
T ss_dssp CHHHHHHHEETTTEECCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHTCCCEEECCEEE
T ss_pred ChhHHhhccCCCCccCCCCCEeeCHHHHHHHHHHHHhCcHhhhCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCCeEE
Confidence 9999999987 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCeEEecCCCCCCcHHHHHHHHHHHhcCCCCC-CCCchhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHHhhcCHH
Q 006865 303 NVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSD-SAKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSLS 380 (628)
Q Consensus 303 ~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~-~~~~~~~~H~liEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls~~ 380 (628)
+|+||+||++||||||+++++++|||||+|++.. ...+++++|+++||+|+||+||. ++|||+|++++ +++|||++
T Consensus 268 ~yrg~~v~~~pPPssGG~~~l~~L~iLe~~~l~~~~~~s~~~~H~~~EA~k~AfadR~~~lgDP~f~~vp--~~~LLs~~ 345 (377)
T 2qmc_A 268 SYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMRQAYADRSVYMGDADFVSVP--VDKLINKA 345 (377)
T ss_dssp EETTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHTCHH
T ss_pred EeCCeEEEeCCCCCchHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhCCHH
Confidence 9999999999999999888889999999998754 24578899999999999999998 69999999987 89999999
Q ss_pred HHHHHHhhcCCCCCCCCCcccccc
Q 006865 381 FAKQIQQKIFDNTTFPPDYYMNRW 404 (628)
Q Consensus 381 ~a~~~~~~I~~~~~~~~~~~~~~~ 404 (628)
|+++++++|+++++.++.+|.+.+
T Consensus 346 ya~~~~~~I~~~~a~~~~~~~~~~ 369 (377)
T 2qmc_A 346 YAKKIFDTIQPDTVTPSSQIKPGM 369 (377)
T ss_dssp HHHHHHHTCBTTBCCCGGGCCGGG
T ss_pred HHHHHHHhCCcccCCChhhcCCCC
Confidence 999999999999888877776543
No 6
>2dg5_A Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_A 2dbw_A* 2dbx_A* 2e0x_A 2e0y_A 2z8i_A* 2z8j_A* 2z8k_A*
Probab=100.00 E-value=2e-94 Score=770.39 Aligned_cols=332 Identities=35% Similarity=0.595 Sum_probs=311.6
Q ss_pred CCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCCCeEEEEEecCCCCeeEEeeeccccc
Q 006865 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (628)
Q Consensus 68 ~~~~~~~~gaVas~~~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGGggf~lv~~~~~g~~~~id~re~AP~ 147 (628)
|+++.+++|||+|+||+||++|++||++||||||||||+++||+||||++||||||+|||||++ ++++++|||||+||+
T Consensus 17 r~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~~GiGGggF~li~~~-~~~~~~id~re~AP~ 95 (366)
T 2dg5_A 17 FHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSK-NGNTTAIDFREMAPA 95 (366)
T ss_dssp SCCEEESSCEEEESCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEECT-TSCEEEEEECCBCCT
T ss_pred CCccccCceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccCCCCCCeEEEEEcC-CCCEEEEeeeecCcc
Confidence 6778899999999999999999999999999999999999999999999999999999999965 789999999999999
Q ss_pred CCChhhhhcCC-----CCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhcCcccCHHHHHHHHHhhhhhc
Q 006865 148 AASQDMYENNP-----GANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRIL 222 (628)
Q Consensus 148 ~a~~~~~~~~~-----~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~ 222 (628)
+++++||.+.. ..+..|++||+|||+|+||+++|+|||+|||++||+|||+|||+||+|++.++..|+...+.+.
T Consensus 96 ~a~~~~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~ 175 (366)
T 2dg5_A 96 KATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVL 175 (366)
T ss_dssp TCCTTTTBCTTSCBCHHHHHTSGGGCCBCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTGGGTG
T ss_pred cCCHHHHhhccCCcCCCccCCCCcccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHh
Confidence 99999997541 2345899999999999999999999999999999999999999999999999999998888888
Q ss_pred CCcccccccc-cCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhcCCceEEEcCeE
Q 006865 223 NDRGLQEVFA-PNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVS 301 (628)
Q Consensus 223 ~~p~~~~~f~-~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~ 301 (628)
.+|+++++|+ |+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+
T Consensus 176 ~~~~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 255 (366)
T 2dg5_A 176 PNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS 255 (366)
T ss_dssp GGSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHTSHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCEE
T ss_pred cCchHHHHhcCCCCeECCCCCEeeCHHHHHHHHHHHHhCchhccCCHHHHHHHHHHHHcCCCCCHHHHhhCCCceeCCeE
Confidence 8888888885 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCeEEecCCCCCCcHHHHHHHHHHHhcCCCCC-CCCchhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHHhhcCH
Q 006865 302 VNVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSD-SAKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSL 379 (628)
Q Consensus 302 ~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~-~~~~~~~~H~liEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls~ 379 (628)
++|+||+||++|||||||++++++|||||+|++.. ...+.+++|+++||+|+||+||. ++|||+|++++ +++|||+
T Consensus 256 ~~yrg~~v~~~pPpssgG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls~ 333 (366)
T 2dg5_A 256 GDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALTNK 333 (366)
T ss_dssp EEETTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHTCH
T ss_pred EEeCCeEEEECCCCchHHHHHHHHHHhccccCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCcccccch--HHHhCCH
Confidence 99999999999999998888889999999998854 34578899999999999999998 69999999987 7999999
Q ss_pred HHHHHHHhhcCCCCCCCCCcccc
Q 006865 380 SFAKQIQQKIFDNTTFPPDYYMN 402 (628)
Q Consensus 380 ~~a~~~~~~I~~~~~~~~~~~~~ 402 (628)
+|+++++++|+++++.++.+|.+
T Consensus 334 ~ya~~~~~~I~~~~~~~~~~~~~ 356 (366)
T 2dg5_A 334 AYAKSIADQIDINKAKPSSEIRP 356 (366)
T ss_dssp HHHHHHHTTCBTTBCCCGGGCCC
T ss_pred HHHHHHHHhcCcccCCChhhcCC
Confidence 99999999999988887766654
No 7
>3g9k_L Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_L*
Probab=100.00 E-value=2.1e-89 Score=717.97 Aligned_cols=298 Identities=32% Similarity=0.502 Sum_probs=266.6
Q ss_pred cccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCCCeEEEEEecCCCCeeEEeeecccccCC
Q 006865 70 IVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPLAA 149 (628)
Q Consensus 70 ~~~~~~gaVas~~~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGGggf~lv~~~~~g~~~~id~re~AP~~a 149 (628)
....++|||+|+||+||++|++||++||||||||||+++||+|||||+||||||+|||||++. +++ +|||||+||+++
T Consensus 15 ~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~-~~~-~id~r~~AP~~a 92 (323)
T 3g9k_L 15 MGDKGTYGVSASHPLAVEEGMKVLKNGGSAVDAAIVVSYVLGVVELHASGIGGGGGMLIISKD-KET-FIDYRETTPYFT 92 (323)
T ss_dssp ---CCCCEEEESSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCTTSEEEEEEECSS-CEE-EEECCCBCCC--
T ss_pred CCCCCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEeCC-CCE-EEEeeccCcHhH
Confidence 445679999999999999999999999999999999999999999999999999999999754 888 999999999977
Q ss_pred ChhhhhcCCCCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhcCcccCHHHHHHHHHhhhhhcCCccccc
Q 006865 150 SQDMYENNPGANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRILNDRGLQE 229 (628)
Q Consensus 150 ~~~~~~~~~~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~~~p~~~~ 229 (628)
..|.++|+|||+|+||+++|+|||+|||++||+|||+|||+||+|++.++..|+...+.|..+|+++
T Consensus 93 ------------~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~~~~~- 159 (323)
T 3g9k_L 93 ------------GNQKPHIGVPGFVAGMEYIHDNYGSLPMGELLQPAINYAEKGFKVDDSLTMRLDLAKPRIYSDKLSI- 159 (323)
T ss_dssp ----------------CCCCBCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHCCTTCGG-
T ss_pred ------------hcCCCcccCchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcCCccc-
Confidence 2477999999999999999999999999999999999999999999999999999888898899988
Q ss_pred ccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhcCCceEEEcCeEEeeCCeEE
Q 006865 230 VFAPNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVSVNVMGYTI 309 (628)
Q Consensus 230 ~f~~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~~~~~g~~v 309 (628)
|+|+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++ |+||++||++|+++|++||+++|+||+|
T Consensus 160 -f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~-----G~lt~~DLa~y~~~~~~Pl~~~yrg~~v 233 (323)
T 3g9k_L 160 -FYPNGEPIETGETLIQTDLARTLKKIQKEGAKGFYEGGVARAISKT-----AKISLEDIKGYKVEVRKPVKGNYMGYDV 233 (323)
T ss_dssp -GSGGGSCCCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHH-----HTCCHHHHHTCCCEEECCEEEEETTEEE
T ss_pred -ccCCCCCCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHc-----CCCCHHHHhhCCceEeCCEEEEeCCeEE
Confidence 8899999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHHHHhcCCCCCC-CCchhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHHhhcCHHHHHHHHh
Q 006865 310 SGMPPPSCGTAGMAMVLNILDSYGSSDS-AKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSLSFAKQIQQ 387 (628)
Q Consensus 310 ~~~ppPssG~~~l~~~LniLe~~~~~~~-~~~~~~~H~liEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls~~~a~~~~~ 387 (628)
|++||||||.+ ++++|||||+|++... .++++++|+++||+|+||++|. ++|||+|+++| +++|||++|++++++
T Consensus 234 ~~~pPpssG~~-~l~~L~ile~~~~~~~~~~~~~~~H~~~EA~k~A~adR~~~lgDP~f~~vp--~~~Lls~~ya~~~~~ 310 (323)
T 3g9k_L 234 YTAPPPFSGVT-LLQMLKLAEKKEVYKDVDHTATYMSKMEEISRIAYQDRKKNLGDPNYVNMD--PNKMVSDKYISTMKN 310 (323)
T ss_dssp EECCTTSCHHH-HHHHHHHHHHTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTCC------C--HHHHTSHHHHHTCC-
T ss_pred EeCCCCCHHHH-HHHHHHHHhcCCCccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcccccCC--HHHhCCHHHHHHHHH
Confidence 99999999766 5599999999998653 4678999999999999999998 69999999987 899999999999999
Q ss_pred hcCC
Q 006865 388 KIFD 391 (628)
Q Consensus 388 ~I~~ 391 (628)
+|++
T Consensus 311 ~I~d 314 (323)
T 3g9k_L 311 ENGD 314 (323)
T ss_dssp ----
T ss_pred hcCc
Confidence 9985
No 8
>2dg5_B Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_B 2dbw_B* 2dbx_B* 2e0x_B 2e0y_B 2z8i_B* 2z8j_B* 2z8k_B*
Probab=100.00 E-value=7.2e-61 Score=469.38 Aligned_cols=188 Identities=37% Similarity=0.543 Sum_probs=180.4
Q ss_pred ceEEEEEcCCCCEEEEEeccCCCCCceeeeCCcceeeccCCCCccC-CCCCCCCCCCCCCCCCCCCCCCCCCCCcceEec
Q 006865 412 TSHFCIVDAERNAVSMTTTVNYPFGAGILSPSTGIVLNNEMGDFSI-PTENPPDMLPPTPANFIKPNKRPLSSMTPLIIT 490 (628)
Q Consensus 412 Tth~sVvD~~GnaVS~T~Sin~~FGSgv~~p~tGi~lNN~m~dFs~-~~~~n~~~~~p~~~N~i~PGKRP~ssmsPtiv~ 490 (628)
||||||+|+|||+||+|+|+|.+|||++++|+|||+|||||+||++ |+.+|.|+++++++|+++|||||+|||+|+||+
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~LNN~m~dFs~~pg~~n~~g~~~~~~N~i~PgKRP~ssm~Ptiv~ 80 (190)
T 2dg5_B 1 TTHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVV 80 (190)
T ss_dssp CEEEEEECTTSCEEEEEEECSSTTTTCEECGGGCCEECCGGGGSBSSTTCCCTTSCCCCSTTBCCTTCCCCBCCCCEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCcCCeeEcCCccEEEeCCCCcccCCCCCcCCcCCCCCCccccCCCCcccccCCCEEEe
Confidence 8999999999999999999999999999999999999999999998 888999999999999999999999999999999
Q ss_pred cCCceeEEecCCCccchHHHHHHHHHHHHHcCCCHHHHhhCCccccccCCCeEEEcccccccCCcCCCCHHHHHHHHHcC
Q 006865 491 KDNQLAGVIGGSGGLHIIPAVIQVFLNHFIFGIESLAAVQNPRVYHKVIPNVVMYENWTVIDGDHIELADETKLFLEERR 570 (628)
Q Consensus 491 k~g~~~l~~Ga~GG~~i~~av~Qvll~~l~~gm~l~~AI~aPR~h~q~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~G 570 (628)
++|+++|++|+|||++|+|+++|+|+|+++|||++||||++||||+|+.|+.+.+|. +++++++++|+++|
T Consensus 81 ~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~~~~~~~~~E~---------~~~~~~~~~L~~~G 151 (190)
T 2dg5_B 81 KDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNVAEATNAPRFHHQWLPDELRVEK---------GFSPDTLKLLEAKG 151 (190)
T ss_dssp ETTEEEEEECCCCGGGHHHHHHHHHHHHHTSCCCHHHHHHSCCEECCSSSCCEEECT---------TSCHHHHHHHHHTT
T ss_pred cCCcEEEEEECCCcchHHHHHHHHHHHHHccCCCHHHHhhCCEEeeccCCCeEEecC---------CCCHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred CeeeeecCcceEEEEEeccCCChhhhhhhhhhcCCccccCcEEEEeecCCC-CCccccC
Q 006865 571 HQLEGRAGGAIVQLIVQTLGNPINEAQKLRKYMGNAQVLHGILTAVSDPRK-DGRPAAV 628 (628)
Q Consensus 571 h~v~~~~~~~~~q~i~~~~~~~~~~~r~~~~~~~~~~~~~G~l~g~sDpR~-~G~a~g~ 628 (628)
|+++....++.+|+|.++ .+|.++|+||||| +|.++||
T Consensus 152 h~v~~~~~~g~~~~i~~~--------------------~~g~~~g~sDpR~~~G~a~g~ 190 (190)
T 2dg5_B 152 QKVALKEAMGSTQSIMVG--------------------PDGELYGASDPRSVDDLTAGY 190 (190)
T ss_dssp CCEEECSCCCCCEEEEEC--------------------TTSCEEEEECTTSTTCEEEEC
T ss_pred cEeEEecCCCeEEEEEEe--------------------CCCeEEEEECCCCCCCeeeeC
Confidence 999877667788998775 2688999999999 9999987
No 9
>2qmc_B GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_B* 2nqo_B* 3fnm_B*
Probab=100.00 E-value=9.6e-59 Score=453.41 Aligned_cols=184 Identities=34% Similarity=0.460 Sum_probs=174.0
Q ss_pred ceEEEEEcCCCCEEEEEeccCCCCCceeeeCCcceeeccCCCCccC-CCCCCCCCCCCCCCCCCCCCCCCCCCCcceEec
Q 006865 412 TSHFCIVDAERNAVSMTTTVNYPFGAGILSPSTGIVLNNEMGDFSI-PTENPPDMLPPTPANFIKPNKRPLSSMTPLIIT 490 (628)
Q Consensus 412 Tth~sVvD~~GnaVS~T~Sin~~FGSgv~~p~tGi~lNN~m~dFs~-~~~~n~~~~~p~~~N~i~PGKRP~ssmsPtiv~ 490 (628)
||||||+|+|||+||+|+|+|.+||||+++|+|||+|||||+||++ |+.+|.||++++++|+++|||||+|||+|+||+
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~LNN~m~dFs~~pg~~n~~g~~~~~~N~i~PgKRP~ssm~Ptiv~ 80 (188)
T 2qmc_B 1 ATHYSVADRWGNAVSVTYTINASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVL 80 (188)
T ss_dssp CEEEEEEETTSCEEEEEEECSSTTTTSCBCTTTCCBCCCGGGGSBSSTTCCCTTSCCCCSTTBCCTTCCCCBCCCCEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCccCeeEcCCCceEEcCCCCCcccCCCCccccCCCCCcccccCCCCccccCCCCEEEE
Confidence 8999999999999999999999999999999999999999999996 888999999999999999999999999999999
Q ss_pred cCCceeEEecCCCccchHHHHHHHHHHHHHcCCCHHHHhhCCccccccCCCeEEEcccccccCCcCCCCHHHHHHHHHcC
Q 006865 491 KDNQLAGVIGGSGGLHIIPAVIQVFLNHFIFGIESLAAVQNPRVYHKVIPNVVMYENWTVIDGDHIELADETKLFLEERR 570 (628)
Q Consensus 491 k~g~~~l~~Ga~GG~~i~~av~Qvll~~l~~gm~l~~AI~aPR~h~q~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~G 570 (628)
|+|+++|++|+|||++|||+++|+|+|+++|||++||||++||||+|+.|+.+.+|.. +++++++++|+++|
T Consensus 81 ~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~h~~~~p~~~~~E~~--------~~~~~~~~~L~~~G 152 (188)
T 2qmc_B 81 KNNKVFLVVGSPGGSRIITTVLQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKF--------GMPADVKDNLTKMG 152 (188)
T ss_dssp ETTEEEEEECCCCGGGHHHHHHHHHHHHHHHCCCHHHHHHSCCCBCCSSSCCEEECTT--------SSCHHHHHHHHHHT
T ss_pred eCCcEEEEEECCCcchHHHHHHHHHHHHHccCCCHHHHhhCCEEeeccCCCeEEEecC--------CCCHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999999999999972 58999999999999
Q ss_pred CeeeeecCcceEEEEEe--ccCCChhhhhhhhhhcCCccccCcEEEEeecCCCC
Q 006865 571 HQLEGRAGGAIVQLIVQ--TLGNPINEAQKLRKYMGNAQVLHGILTAVSDPRKD 622 (628)
Q Consensus 571 h~v~~~~~~~~~q~i~~--~~~~~~~~~r~~~~~~~~~~~~~G~l~g~sDpR~~ 622 (628)
|+++....++.+|+|.+ +. .+|.++|+|||||+
T Consensus 153 h~v~~~~~~g~~q~I~~~~~~-------------------~~g~~~g~sDpR~~ 187 (188)
T 2qmc_B 153 YQIVTKPVMGDVNAIQVLPKT-------------------KGSVFYGSTDPRKE 187 (188)
T ss_dssp CCEEECSCCCCCCEEEEEECS-------------------SSEEEEEECCTTC-
T ss_pred CeeEEccCCeeEEEEEEeeeC-------------------CCCEEEEEeCCCCC
Confidence 99987766788999987 31 26889999999997
No 10
>2v36_B Gamma-glutamyltranspeptidase small chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_B*
Probab=100.00 E-value=6.9e-58 Score=448.30 Aligned_cols=179 Identities=37% Similarity=0.585 Sum_probs=157.6
Q ss_pred ceEEEEEcCCCCEEEEEeccCCCCCceeeeCCcceeeccCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEecc
Q 006865 412 TSHFCIVDAERNAVSMTTTVNYPFGAGILSPSTGIVLNNEMGDFSIPTENPPDMLPPTPANFIKPNKRPLSSMTPLIITK 491 (628)
Q Consensus 412 Tth~sVvD~~GnaVS~T~Sin~~FGSgv~~p~tGi~lNN~m~dFs~~~~~n~~~~~p~~~N~i~PGKRP~ssmsPtiv~k 491 (628)
||||||+|++||+||+|+|+|.+||||+++|+|||+|||||+||++. |+++|+++|||||+|||+|+||++
T Consensus 1 Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tG~~LNN~m~dFs~~---------pg~~N~i~PGKRP~ssm~Ptiv~~ 71 (193)
T 2v36_B 1 TTHFTVADRWGNVVSYTTTIEQLFGTGIMVPDYGVILNNELTDFDAI---------PGGANEVQPNKRPLSSMTPTILFK 71 (193)
T ss_dssp CEEEEEEETTSCEEEEEEECSSTTTTSCBCTTTCCBCCCGGGGSBSS---------SSSTTBCCTTCCCCBCCCCEEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCcCCeeEcCCCceeECCCCCCccCC---------CCCCCccCCCCcccccCCCEEEEe
Confidence 89999999999999999999999999999999999999999999953 457899999999999999999999
Q ss_pred CCceeEEecCCCccchHHHHHHHHHHHHHcCCCHHHHhhCCccccccCCCeEEEcccccccCCcCCCCHHHHHHHHHcCC
Q 006865 492 DNQLAGVIGGSGGLHIIPAVIQVFLNHFIFGIESLAAVQNPRVYHKVIPNVVMYENWTVIDGDHIELADETKLFLEERRH 571 (628)
Q Consensus 492 ~g~~~l~~Ga~GG~~i~~av~Qvll~~l~~gm~l~~AI~aPR~h~q~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh 571 (628)
+|+++|++|+|||++|||+++|+|+|+++|||++||||++||||+|+ |+.+.+|. +++++++++|+++||
T Consensus 72 ~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~~-p~~v~~E~---------~~~~~~~~~L~~~Gh 141 (193)
T 2v36_B 72 DDKPVLTVGSPGGATIISSVLQTILYHIEYGMELKAAVEEPRIYTNS-MSSYRYED---------GVPKDVLSKLNGMGH 141 (193)
T ss_dssp TTEEEEEEECCCGGGHHHHHHHHHHHHHTSCCCHHHHHHSCCEEEEE-TTEEEECT---------TSCC----------C
T ss_pred CCCEEEEEECCCcchhHHHHHHHHHHHHccCCCHHHHhhCCEeeecC-CCeeEecC---------CCCHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999998 99999999 899999999999999
Q ss_pred eee-eecCcceEEEEEeccCCChhhhhhhhhhcCCccccCcEEEEeecCCCCCccccC
Q 006865 572 QLE-GRAGGAIVQLIVQTLGNPINEAQKLRKYMGNAQVLHGILTAVSDPRKDGRPAAV 628 (628)
Q Consensus 572 ~v~-~~~~~~~~q~i~~~~~~~~~~~r~~~~~~~~~~~~~G~l~g~sDpR~~G~a~g~ 628 (628)
+++ ....++.+|+|.++. .+|.++|+|||||+|.+++|
T Consensus 142 ~v~~~~~~~g~~qaI~~~~-------------------~~g~~~g~sDpR~~G~a~~~ 180 (193)
T 2v36_B 142 KFGTSPVDIGNVQSISIDH-------------------ENGTFKGVADSSRNGAAIGI 180 (193)
T ss_dssp CCCSSCCCCCCCEEEEEET-------------------TTTEEEEECCTTTTCBC-CC
T ss_pred eeeeecCCCcEEEEEEEEC-------------------CCCEEEEEeCCCCCCeEEEE
Confidence 998 655678899998741 26889999999999999885
No 11
>3g9k_S Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_S*
Probab=100.00 E-value=5.6e-55 Score=423.00 Aligned_cols=171 Identities=25% Similarity=0.318 Sum_probs=152.1
Q ss_pred ceEEEEEcCCCCEEEEEeccCCCCCceeeeCCcceeeccCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEecc
Q 006865 412 TSHFCIVDAERNAVSMTTTVNYPFGAGILSPSTGIVLNNEMGDFSIPTENPPDMLPPTPANFIKPNKRPLSSMTPLIITK 491 (628)
Q Consensus 412 Tth~sVvD~~GnaVS~T~Sin~~FGSgv~~p~tGi~lNN~m~dFs~~~~~n~~~~~p~~~N~i~PGKRP~ssmsPtiv~k 491 (628)
||||||+|+|||+||+|+|+|.+||||+++ |||+|||||+||+ | +++|+++|||||+|||+|+||++
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~--tGi~LNN~m~dFs-p----------~~~N~i~PgKRP~ssm~Ptiv~~ 67 (177)
T 3g9k_S 1 TTHFVIIDRDGTVVSSTNTLSNFFGTGKYT--AGFFLNNQLQNFG-S----------EGFNSYEPGKRSRTFMAPTVLKK 67 (177)
T ss_dssp CEEEEEECTTCCEEEEEEECSSTTTTSCEE--TTEECCCCCCC---------------------CCCCCCCCCCCEEEEE
T ss_pred CeEEEEECCCCCEEEEEccCCCCCCcceEe--cceEEcCcccccC-C----------CCCcccCCCCccccCCCCEEEEc
Confidence 899999999999999999999999999999 9999999999998 3 47899999999999999999999
Q ss_pred CCceeEEecCCCccchHHHHHHHHHHHHHcCCCHHHHhhCCccccccCCCeEEEcccccccCCcCCCCHHHHHHHHHcCC
Q 006865 492 DNQLAGVIGGSGGLHIIPAVIQVFLNHFIFGIESLAAVQNPRVYHKVIPNVVMYENWTVIDGDHIELADETKLFLEERRH 571 (628)
Q Consensus 492 ~g~~~l~~Ga~GG~~i~~av~Qvll~~l~~gm~l~~AI~aPR~h~q~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh 571 (628)
+|+ +|++|+|||++|||+++|+|+|+++|||++||||++||||+ .|+.+.+|. +++++++++|++|||
T Consensus 68 ~g~-~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~--~~~~~~~E~---------~~~~~~~~~L~~~Gh 135 (177)
T 3g9k_S 68 DGE-TIGIGSPGGNRIPQILTPILDKYTHGKGSLQDIINEYRFTF--EKNTAYTEI---------QLSSEVKNELSRKGL 135 (177)
T ss_dssp TTE-EEEEECCCGGGHHHHHHHHHHHHHTTCSCHHHHHHSCCEEE--ETTEEEESS---------CCCHHHHHHHHTTTC
T ss_pred CCc-EEEEECCCHHHHHHHHHHHHHHHHhCCCCHHHHHhCCeeec--CCCeEEEcC---------CCCHHHHHHHHHcCC
Confidence 998 99999999999999999999999999999999999999998 699999999 899999999999999
Q ss_pred eeeeec---CcceEEEEEeccCCChhhhhhhhhhcCCccccCcEEEEeecCCCCCccc
Q 006865 572 QLEGRA---GGAIVQLIVQTLGNPINEAQKLRKYMGNAQVLHGILTAVSDPRKDGRPA 626 (628)
Q Consensus 572 ~v~~~~---~~~~~q~i~~~~~~~~~~~r~~~~~~~~~~~~~G~l~g~sDpR~~G~a~ 626 (628)
+++... .++.+|+|.++. ++|.|+|+|||||+|.|.
T Consensus 136 ~v~~~~~~~~~g~~~ai~~~~-------------------~~g~l~g~sDpR~~G~a~ 174 (177)
T 3g9k_S 136 NVKKKVSPAFFGGVQALIKDE-------------------RDNVITGAGDGRRNGTWK 174 (177)
T ss_dssp EEEECCCGGGGCCCEEEEEET-------------------TTTEEEEECCGGGTCEEE
T ss_pred eeEECCCCCcceeEEEEEEEC-------------------CCCEEEEEeCCCCCCeee
Confidence 998754 257899998752 378999999999999875
No 12
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=90.65 E-value=0.4 Score=45.26 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=32.1
Q ss_pred CChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhc-cCccCCCCC
Q 006865 81 DDGRCSEIGASMLRQGGHAVDAAVATALCLGVVN-PMASGIGGG 123 (628)
Q Consensus 81 ~~~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~-P~ssGiGGg 123 (628)
.-..|.++|.++|++||+|.||.+++.-.+=--. -+.+|.|+-
T Consensus 12 ~~~~a~~~g~~~L~~G~sAlDAV~~av~~lEd~p~~fNAG~Gs~ 55 (162)
T 1apy_A 12 PFKNATEAAWRALASGGSALDAVESGCAMCEREQCDGSVGFGGS 55 (162)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTGGGSSSSSSC
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCcCcCCCCC
Confidence 3457899999999999999999998844442222 367887764
No 13
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=84.94 E-value=1 Score=43.00 Aligned_cols=40 Identities=28% Similarity=0.381 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCC
Q 006865 83 GRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGG 122 (628)
Q Consensus 83 ~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGG 122 (628)
..|.++|.++|++||+|.||.+++.-++=--.-+.+|.|+
T Consensus 32 ~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs 71 (177)
T 1k2x_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGA 71 (177)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCc
Confidence 3567899999999999999999986666544446666665
No 14
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=84.18 E-value=1.4 Score=45.36 Aligned_cols=45 Identities=24% Similarity=0.384 Sum_probs=33.9
Q ss_pred EEc-CCh-hHHHHHHHHHhcCCCHHHHHHHHHHHHHhhcc--CccCCCCC
Q 006865 78 VAA-DDG-RCSEIGASMLRQGGHAVDAAVATALCLGVVNP--MASGIGGG 123 (628)
Q Consensus 78 Vas-~~~-~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P--~ssGiGGg 123 (628)
|+| ... .|.++|.++|++||+|.||.+++.-.|= -.| +.+|.|+-
T Consensus 8 i~tw~~~~~a~~~~~~~L~~ggsaldAV~~av~~lE-d~p~~fnaG~Gs~ 56 (295)
T 1p4k_A 8 LSTWNFGLHANVEAWKVLSKGGKALDAVEKGVRLVE-DDPTERSVGYGGR 56 (295)
T ss_dssp EEESTTHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-HCTTCTTSSTTCC
T ss_pred EEccccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-hCCCccCcccCCC
Confidence 444 454 7899999999999999999998855543 445 66777653
No 15
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=84.02 E-value=1.2 Score=43.25 Aligned_cols=39 Identities=23% Similarity=0.411 Sum_probs=30.5
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCC
Q 006865 84 RCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGG 122 (628)
Q Consensus 84 ~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGG 122 (628)
.|.++|.++|++||+|.||.+++.-+|=--.-+.+|.|+
T Consensus 36 ~a~~~g~~~L~~G~sAlDAV~~av~~lEd~p~fNaG~Gs 74 (195)
T 2gez_A 36 HCLQIGVEALKAQKPPLDVVELVVRELENIEHFNAGIGS 74 (195)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCc
Confidence 567889999999999999999986666544446666665
No 16
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=83.59 E-value=1.1 Score=46.43 Aligned_cols=41 Identities=32% Similarity=0.480 Sum_probs=31.6
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCCC
Q 006865 83 GRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGG 123 (628)
Q Consensus 83 ~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGGg 123 (628)
..|.++|.++|++||+|.||.+++.-+|=--.-+.+|.|+-
T Consensus 30 ~~a~~~g~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs~ 70 (310)
T 4gdv_A 30 VRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSV 70 (310)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCCCCccCcC
Confidence 35778999999999999999988766665443466777653
No 17
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=73.24 E-value=3.6 Score=42.80 Aligned_cols=40 Identities=28% Similarity=0.381 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCccCCCC
Q 006865 83 GRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGG 122 (628)
Q Consensus 83 ~~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P~ssGiGG 122 (628)
..|.++|.++|++||+|.||.+++.-.|=--.-+.+|.|+
T Consensus 32 ~~a~~~~~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs 71 (320)
T 3c17_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGA 71 (320)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSTTSSSSTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhhhhcCCCCCCccCC
Confidence 3578899999999999999999986666444446677665
No 18
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=69.45 E-value=4.8 Score=43.44 Aligned_cols=39 Identities=28% Similarity=0.425 Sum_probs=29.2
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHHHHhhcc-CccCCCCC
Q 006865 84 RCSEIGASMLRQGGHAVDAAVATALCLGVVNP-MASGIGGG 123 (628)
Q Consensus 84 ~aS~aG~~IL~~GGNAvDAAIAaa~~l~Vv~P-~ssGiGGg 123 (628)
.|.++|.++|++||+|.||.+++.-.|=- .| +.+|.|+-
T Consensus 67 ~A~~~a~~~L~~GgsAlDAV~~av~~lEd-~p~fNaG~Gs~ 106 (420)
T 2a8j_A 67 RACQKAIEKLQAGALATDAVTAALVELED-SPFTNAGMGSN 106 (420)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHH-STTSSSSTTCC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCCccCCcC
Confidence 35678999999999999999987555543 45 46777653
No 19
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=64.72 E-value=30 Score=35.74 Aligned_cols=26 Identities=23% Similarity=0.234 Sum_probs=22.7
Q ss_pred CCCCceEEEEEcCCCCEEEEEeccCC
Q 006865 408 RDHGTSHFCIVDAERNAVSMTTTVNY 433 (628)
Q Consensus 408 ~~~~Tth~sVvD~~GnaVS~T~Sin~ 433 (628)
..+||+...++|.+||..+.|+|-+.
T Consensus 166 ~~~dTVG~ValD~~G~iaaaTSTgG~ 191 (310)
T 4gdv_A 166 KNLGTVGAVALDCKGNVAYATSTGGI 191 (310)
T ss_dssp -CCCCEEEEEECTTSCEEEEEEECCS
T ss_pred cccCceeeEEEeCCCCEEEEECCCCc
Confidence 45799999999999999999999554
No 20
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=41.82 E-value=8.2 Score=38.37 Aligned_cols=71 Identities=23% Similarity=0.411 Sum_probs=41.3
Q ss_pred HHHHHHHhhhhhcCCccccccccc----CC-cccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHH----Hhc
Q 006865 210 LGRHIAKSGGRILNDRGLQEVFAP----NG-KLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDV----SKA 280 (628)
Q Consensus 210 la~~l~~~~~~l~~~p~~~~~f~~----~G-~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~----~~~ 280 (628)
|.....++...|.++|.+|.-|.. =| .|+.-+-- =-+++| |...||. ++|.+|++.+ .++
T Consensus 23 L~~FA~kH~~eI~~dp~fR~~F~~mc~siGVDPlas~kg----~ws~~l------G~gdfy~-eLavqIvEvC~~tr~~n 91 (234)
T 3cuq_A 23 LEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKG----FWSEML------GVGDFYY-ELGVQIIEVCLALKHRN 91 (234)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCCTTSCTTS----HHHHHH------CHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccccccCHHHHHHHHHHHHHcCCCcccCCcc----hhhhhc------CcchHHH-HHHHHHHHHHHHHHHhc
Confidence 334444555677777877666631 12 23332200 112222 3346887 7888888875 467
Q ss_pred CCccCHhhhcC
Q 006865 281 GGILTMEDLRN 291 (628)
Q Consensus 281 GG~lt~~DL~~ 291 (628)
||+|+++||..
T Consensus 92 GGli~L~el~~ 102 (234)
T 3cuq_A 92 GGLITLEELHQ 102 (234)
T ss_dssp SSEEEHHHHHH
T ss_pred CCeeEHHHHHH
Confidence 99999999865
No 21
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=41.50 E-value=16 Score=36.28 Aligned_cols=32 Identities=16% Similarity=0.374 Sum_probs=24.8
Q ss_pred CCCccCchHHHHHHHHHH----hcCCccCHhhhcCCc
Q 006865 261 PQALYNGTVGEMLVKDVS----KAGGILTMEDLRNYK 293 (628)
Q Consensus 261 ~~~FY~G~iA~~iv~~~~----~~GG~lt~~DL~~Y~ 293 (628)
...||. ++|.+|++.+. ++||+|+++||...-
T Consensus 88 ~gdfy~-eLavqIvEvC~~tr~~nGGli~l~el~~~~ 123 (233)
T 1u5t_A 88 VNDFYY-EVCLKVIEICRQTKDMNGGVISFQELEKVH 123 (233)
T ss_dssp HHHHHH-HHHHHHHHHHHHHTTTSSSCEEHHHHHHTT
T ss_pred cchHHH-HHHHHHHHHHHHHHHhcCCeeEHHHHHHHH
Confidence 346887 78889888874 679999999987643
No 22
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=36.66 E-value=63 Score=33.44 Aligned_cols=26 Identities=19% Similarity=0.206 Sum_probs=22.8
Q ss_pred CCCCceEEEEEcCCCCEEEEEeccCC
Q 006865 408 RDHGTSHFCIVDAERNAVSMTTTVNY 433 (628)
Q Consensus 408 ~~~~Tth~sVvD~~GnaVS~T~Sin~ 433 (628)
..+||+-..++|++||..+-|+|-+.
T Consensus 174 ~~~dTVGaValD~~G~lAaaTSTGG~ 199 (320)
T 3c17_A 174 QKMGAVGAVALDLDGNLAAATSTGGM 199 (320)
T ss_dssp TTCCCEEEEEECTTSCEEEEEEECCC
T ss_pred CCCCCEEEEEEeCCCCEEEEEcCCCc
Confidence 45799999999999999999999554
No 23
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=33.21 E-value=68 Score=32.83 Aligned_cols=26 Identities=27% Similarity=0.291 Sum_probs=22.8
Q ss_pred CCCCceEEEEEcCCCCEEEEEeccCC
Q 006865 408 RDHGTSHFCIVDAERNAVSMTTTVNY 433 (628)
Q Consensus 408 ~~~~Tth~sVvD~~GnaVS~T~Sin~ 433 (628)
+.+||+-..++|++||..+.|+|-+.
T Consensus 148 ~~~dTVGaValD~~G~lAaaTSTgG~ 173 (295)
T 1p4k_A 148 ENHNTIGMIALDAQGNLSGACTTSGM 173 (295)
T ss_dssp SBBCCEEEEEECTTSCEEEEEEECCS
T ss_pred CCCCCEEEEEEcCCCCEEEEEccCCc
Confidence 35799999999999999999999544
No 24
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=27.35 E-value=51 Score=30.15 Aligned_cols=22 Identities=14% Similarity=0.125 Sum_probs=19.4
Q ss_pred ceEEEEEcCCCCEEEEEeccCC
Q 006865 412 TSHFCIVDAERNAVSMTTTVNY 433 (628)
Q Consensus 412 Tth~sVvD~~GnaVS~T~Sin~ 433 (628)
|+...++|++||..+.|+|-+.
T Consensus 1 TVGaValD~~G~lAaaTSTGG~ 22 (141)
T 1apy_B 1 TIGMVVIHKTGHIAAGTSTNGI 22 (141)
T ss_dssp CEEEEEECTTSCEEEEEEECCS
T ss_pred CEEEEEEeCCCCEEEEECCCCc
Confidence 6788999999999999999554
No 25
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=26.91 E-value=20 Score=33.74 Aligned_cols=27 Identities=19% Similarity=0.230 Sum_probs=18.9
Q ss_pred CccCchHHHHHHHHHH---h-----cCC-ccCHhhhc
Q 006865 263 ALYNGTVGEMLVKDVS---K-----AGG-ILTMEDLR 290 (628)
Q Consensus 263 ~FY~G~iA~~iv~~~~---~-----~GG-~lt~~DL~ 290 (628)
.||. ++|.+|++.+. + +|| +|++.||-
T Consensus 11 ~f~~-ELa~qi~e~c~~~~~~~~~~~GG~~I~L~dl~ 46 (169)
T 1u5t_B 11 LFLD-EIAREIYEFTLSEFKDLNSDTNYMIITLVDLY 46 (169)
T ss_dssp THHH-HHHHHHHHHHHTTTTTSSSCCCCCCEETTHHH
T ss_pred HHHH-HHHHHHHHHHhhcchhhHHhcCceeEEHHHHH
Confidence 3555 78888888877 4 578 77777654
No 26
>2gez_B L-asparaginase beta subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=26.06 E-value=57 Score=29.48 Aligned_cols=22 Identities=32% Similarity=0.228 Sum_probs=19.3
Q ss_pred ceEEEEEcCCCCEEEEEeccCC
Q 006865 412 TSHFCIVDAERNAVSMTTTVNY 433 (628)
Q Consensus 412 Tth~sVvD~~GnaVS~T~Sin~ 433 (628)
|+...++|++||..+-|+|-+.
T Consensus 1 TVGaValD~~G~iAaatSTgG~ 22 (133)
T 2gez_B 1 TVGCVAVDSHGNLASATSTGGL 22 (133)
T ss_dssp CEEEEEECTTCCEEEEEEECCS
T ss_pred CEEEEEEeCCCCEEEEECCCCc
Confidence 6778999999999999999554
No 27
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=26.00 E-value=55 Score=29.97 Aligned_cols=22 Identities=23% Similarity=0.161 Sum_probs=19.4
Q ss_pred ceEEEEEcCCCCEEEEEeccCC
Q 006865 412 TSHFCIVDAERNAVSMTTTVNY 433 (628)
Q Consensus 412 Tth~sVvD~~GnaVS~T~Sin~ 433 (628)
|+...++|++||..+-|+|-+.
T Consensus 1 TVGaValD~~G~iAaaTSTgG~ 22 (143)
T 1k2x_B 1 TVGAVALDLDGNLAAATSTGGM 22 (143)
T ss_dssp CEEEEEECTTSCEEEEEEECCC
T ss_pred CeEEEEEeCCCCEEEEECCCCc
Confidence 6788999999999999999554
No 28
>3gxq_A Putative regulator of transfer genes ARTA; ribbon-helix-helix, plasmid, DNA binding protein/DNA complex; HET: DNA; 2.35A {Staphylococcus aureus subsp}
Probab=24.10 E-value=25 Score=25.79 Aligned_cols=15 Identities=27% Similarity=0.501 Sum_probs=12.3
Q ss_pred ChhHHHHHHHHHhcC
Q 006865 82 DGRCSEIGASMLRQG 96 (628)
Q Consensus 82 ~~~aS~aG~~IL~~G 96 (628)
-.-.|++|++||++|
T Consensus 35 fdnvsqagreilkkg 49 (54)
T 3gxq_A 35 FDNVSQAGREILKKG 49 (54)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHH
Confidence 345799999999987
No 29
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=22.03 E-value=26 Score=34.24 Aligned_cols=29 Identities=14% Similarity=0.287 Sum_probs=22.4
Q ss_pred CCccCchHHHHHHHHH----HhcCCccCHhhhcC
Q 006865 262 QALYNGTVGEMLVKDV----SKAGGILTMEDLRN 291 (628)
Q Consensus 262 ~~FY~G~iA~~iv~~~----~~~GG~lt~~DL~~ 291 (628)
..||. ++|.+|++.+ .++||+|++.||..
T Consensus 71 ~~f~~-ELa~qi~e~c~~~~~~~GG~I~L~dl~~ 103 (218)
T 3cuq_B 71 TQYHM-QLAKQLAGILQVPLEERGGIMSLTEVYC 103 (218)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHTTSEEEHHHHHH
T ss_pred cHHHH-HHHHHHHHHHHHHHHhCCCeEEHHHHHH
Confidence 34666 8888888876 46799999999764
No 30
>2q6k_A Chlorinase; complex with adenosine, biosynthetic protein; HET: ADN; 1.55A {Salinispora tropica} PDB: 2q6i_A* 2q6o_A* 2q6l_A*
Probab=21.29 E-value=46 Score=33.88 Aligned_cols=34 Identities=12% Similarity=0.242 Sum_probs=26.7
Q ss_pred CCceEEEEEcC----CCCEEEEEeccCCCCCceeeeCCccee
Q 006865 410 HGTSHFCIVDA----ERNAVSMTTTVNYPFGAGILSPSTGIV 447 (628)
Q Consensus 410 ~~Tth~sVvD~----~GnaVS~T~Sin~~FGSgv~~p~tGi~ 447 (628)
.+|.|++|||. +..+|.+-+.-+.+ ++.|..|++
T Consensus 63 ~gTVhv~VVDPGVGt~Rr~i~v~~~~~~~----fVgPDNGll 100 (283)
T 2q6k_A 63 AHTVICAYVYPETGTATHTIAVRNEKGQL----LVGPNNGLL 100 (283)
T ss_dssp TTEEEEEECCTTTTSSCCEEEEEETTSCE----EEEESSSTT
T ss_pred CCCEEEEEECCCCCCCCceEEEEEcCCcE----EEEcCCChh
Confidence 58999999998 89999987633333 688888874
No 31
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=20.68 E-value=68 Score=34.50 Aligned_cols=26 Identities=19% Similarity=0.179 Sum_probs=20.8
Q ss_pred CCCceEEEEEcCCCCEEEEEeccCCC
Q 006865 409 DHGTSHFCIVDAERNAVSMTTTVNYP 434 (628)
Q Consensus 409 ~~~Tth~sVvD~~GnaVS~T~Sin~~ 434 (628)
.+||+-..++|++||..+.|+|-+..
T Consensus 231 ~~dTVGaVAlD~~G~lAAaTSTGG~~ 256 (420)
T 2a8j_A 231 TLDTVGAVVVDHEGNVAAAVSSGGLA 256 (420)
T ss_dssp ---CEEEEEEETTCCEEEEEEECCST
T ss_pred CCCCEEEEEEeCCCCEEEEEcCCCCc
Confidence 46999999999999999999996543
Done!