BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006868
(628 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 323/648 (49%), Gaps = 63/648 (9%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 14 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDNA 72
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 73 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYV 129
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFFPQGPDHVIEEM 175
D RL LGA + E GLGDD E W W + + G + I +
Sbjct: 130 DKRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFWLAVCE-HFGVEATGEESSIRQY 186
Query: 176 KLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA------V 229
+L+ VH +D++ ++ + G+L +Y N+
Sbjct: 187 ELV----VH----------------TDIDAAKVYMG-----EMGRLKSYENQKPPFDAKN 221
Query: 230 CFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNL 289
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 222 PFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGA 281
Query: 290 DPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATA 349
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +A+
Sbjct: 282 DLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITNP-PRTNVLYELAQYASE 336
Query: 350 EHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRA 407
E+E L+ AS EG++ + + RR +L +L+D PS++ PID L +L+P L+ R
Sbjct: 337 PSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARY 396
Query: 408 FSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQK 463
+SI+SS HPN VH+ VV + T R G+ + WL +P + G +P + +K
Sbjct: 397 YSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRK 456
Query: 464 GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLY 520
P + P+I++GPGTG APF GF++ERA ++ + ++GCR D D+LY
Sbjct: 457 SQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLY 516
Query: 521 RELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 580
RE L+ DG ++ VAFSR+Q KVYVQH + + + +W L+ A IYV
Sbjct: 517 RE-ELAQFHRDGALTQLN-----VAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVC 570
Query: 581 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
G A M DV +TF +IV++ G A +++K L GRY ++ WS
Sbjct: 571 GDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 618
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 322/648 (49%), Gaps = 63/648 (9%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 14 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDNA 72
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 73 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYV 129
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFFPQGPDHVIEEM 175
D RL LGA + E GLGDD E W W + + G + I +
Sbjct: 130 DKRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFWLAVCE-HFGVEATGEESSIRQY 186
Query: 176 KLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA------V 229
+L+ VH +D++ ++ + G+L +Y N+
Sbjct: 187 ELV----VH----------------TDIDAAKVYMG-----EMGRLKSYENQKPPFDAKN 221
Query: 230 CFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNL 289
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 222 PFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGA 281
Query: 290 DPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATA 349
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +A+
Sbjct: 282 DLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITNP-PRTNVLYELAQYASE 336
Query: 350 EHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRA 407
E+E L+ AS EG++ + + RR +L +L+D PS++ PID L +L+P L+ R
Sbjct: 337 PSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARY 396
Query: 408 FSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQK 463
+SI+SS HPN VH+ VV + T R G + WL +P + G +P + +K
Sbjct: 397 YSIASSSKVHPNSVHICAVVVEYETKAGRINKGEATNWLRAKEPVGENGGRALVPMFVRK 456
Query: 464 GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLY 520
P + P+I++GPGTG APF GF++ERA ++ + ++GCR D D+LY
Sbjct: 457 SQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLY 516
Query: 521 RELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 580
RE L+ DG ++ VAFSR+Q KVYVQH + + + +W L+ A IYV
Sbjct: 517 RE-ELAQFHRDGALTQLN-----VAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVC 570
Query: 581 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
G A M DV +TF +IV++ G A +++K L GRY ++ WS
Sbjct: 571 GDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 618
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 317/648 (48%), Gaps = 63/648 (9%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 14 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDNA 72
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 73 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYV 129
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFFPQGPDHVIEEM 175
D RL LGA + E GLGDD E W W P+ E
Sbjct: 130 DKRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFW-------PAVCEHFGVEATGEE 180
Query: 176 KLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA------V 229
I Q ++ + + ID A + G+L +Y N+
Sbjct: 181 SSIRQYEL-VVHTDIDAAKVYMG------------------EMGRLKSYENQKPPFDAKN 221
Query: 230 CFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNL 289
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 222 PFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGA 281
Query: 290 DPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATA 349
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +A+
Sbjct: 282 DLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITNP-PRTNVLYELAQYASE 336
Query: 350 EHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRA 407
E+E L+ AS EG++ + + RR +L +L+D PS++ PID L +L+P L+
Sbjct: 337 PSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQAHY 396
Query: 408 FSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQK 463
+SI+SS HPN VH+ VV + T R G+ + WL +P + G +P + +K
Sbjct: 397 YSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPAGENGGRALVPMFVRK 456
Query: 464 GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLY 520
P + P+I++GPGTG APF GF++ERA ++ + ++GCR D D+LY
Sbjct: 457 SQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLY 516
Query: 521 RELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 580
RE L+ DG ++ VAFSR+Q KVYVQH + + + +W L+ A IYV
Sbjct: 517 RE-ELAQFHRDGALTQLN-----VAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVC 570
Query: 581 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
G A M DV +TF +IV++ G A +++K L GRY ++ WS
Sbjct: 571 GDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 618
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 198/652 (30%), Positives = 318/652 (48%), Gaps = 70/652 (10%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 17 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDKS 75
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 76 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYV 132
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFF---PQGPDHVI 172
D RL LGA + E GLGDD E W W + + FF G + I
Sbjct: 133 DQRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFWPAVCE----FFGVEATGEESSI 186
Query: 173 EEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA---- 228
+ +L+ VH M + + G+L +Y N+
Sbjct: 187 RQYELV----VHED---------------------MDVAKVYTGEMGRLKSYENQKPPFD 221
Query: 229 --VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQR 286
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 222 AKNPFLAAVTANRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEI 281
Query: 287 CNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYF 346
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +
Sbjct: 282 LGADLDVIMSLNNLDEESN----KKHPFPCPTTYRTALTYYLDITN-PPRTNVLYELAQY 336
Query: 347 ATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLK 404
A+ E+E L AS EG++ + + RR +L +L+D+PS++ PID L +L+P L+
Sbjct: 337 ASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPIDHLCELLPRLQ 396
Query: 405 TRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAW 460
R ++I+SS HPN VH+ V + R G+ + WL +P + G +P +
Sbjct: 397 ARYYAIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMF 456
Query: 461 FQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-D 517
+K P + P+I++GPGTG APF GF++ERA ++ + ++GCR D D
Sbjct: 457 VRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDED 516
Query: 518 FLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLL-SKAS 576
+LYRE L+ DG ++ VAFSR+Q KVYVQH + + +W L+ A
Sbjct: 517 YLYRE-ELARFHKDGALTQLN-----VAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAH 570
Query: 577 IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
IYVAG A M DV +TF +IV++ G A +++K L GRY + WS
Sbjct: 571 IYVAGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLNVWS 622
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 198/652 (30%), Positives = 318/652 (48%), Gaps = 70/652 (10%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 10 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDKS 68
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 69 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYV 125
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFF---PQGPDHVI 172
D RL LGA + E GLGDD E W W + + FF G + I
Sbjct: 126 DQRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFWPAVCE----FFGVEATGEESSI 179
Query: 173 EEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA---- 228
+ +L+ VH M + + G+L +Y N+
Sbjct: 180 RQYELV----VHED---------------------MDVAKVYTGEMGRLKSYENQKPPFD 214
Query: 229 --VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQR 286
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 215 AKNPFLAAVTANRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEI 274
Query: 287 CNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYF 346
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +
Sbjct: 275 LGADLDVIMSLNNLDEESN----KKHPFPCPTTYRTALTYYLDITNP-PRTNVLYELAQY 329
Query: 347 ATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLK 404
A+ E+E L AS EG++ + + RR +L +L+D+PS++ PID L +L+P L+
Sbjct: 330 ASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPIDHLCELLPRLQ 389
Query: 405 TRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAW 460
R +SI+SS HPN VH+ V + R G+ + WL +P + G +P +
Sbjct: 390 ARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMF 449
Query: 461 FQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-D 517
+K P + P+I++GPGTG APF GF++ERA ++ + ++GCR D D
Sbjct: 450 VRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDED 509
Query: 518 FLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLL-SKAS 576
+LYRE L+ DG ++ VAFSR+Q KVYVQH + + +W L+ A
Sbjct: 510 YLYRE-ELARFHKDGALTQLN-----VAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAH 563
Query: 577 IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
IYV G A M DV +TF +IV++ G A +++K L GRY ++ WS
Sbjct: 564 IYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVWS 615
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 198/649 (30%), Positives = 321/649 (49%), Gaps = 68/649 (10%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 17 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDKS 75
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 76 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYV 132
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFFPQGPDHVIEEM 175
D RL LGA + E GLGDD +G L+ + WR F+P + E
Sbjct: 133 DQRLEQLGAQRIFELGLGDD------DGNLEEDFIT-WRE------QFWPAVCEFFGVEA 179
Query: 176 KLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA------V 229
I Q ++ + + +D A + G+L +Y N+
Sbjct: 180 SSIRQYEL-VVHEDMDVA------------------KVYTGEMGRLKSYENQKPPFDAKN 220
Query: 230 CFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNL 289
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 221 PFLAAVTANRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGA 280
Query: 290 DPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATA 349
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +A+
Sbjct: 281 DLDVIMSLNNLDEESN----KKHPFPCPTTYRTALTYYLDITNP-PRTNVLYELAQYASE 335
Query: 350 EHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRA 407
E+E L AS EG++ + + RR +L +L+D+PS++ PID L +L+P L+ R
Sbjct: 336 PSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPIDHLCELLPRLQARY 395
Query: 408 FSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQK 463
+SI+SS HPN VH+ V + R G+ + WL +P + G +P + +K
Sbjct: 396 YSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRK 455
Query: 464 GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLY 520
P + P+I++GPGTG APF GF++ERA ++ + ++GCR D D+LY
Sbjct: 456 SQFRLPFKSTTPVIMVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLY 515
Query: 521 RELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLL-SKASIYV 579
RE L+ DG ++ VAFSR+Q KVYVQH + + +W L+ A IYV
Sbjct: 516 RE-ELARFHKDGALTQLN-----VAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYV 569
Query: 580 AGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
G A M DV +TF +IV++ G A +++K L GRY ++ WS
Sbjct: 570 CGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVWS 618
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 197/652 (30%), Positives = 317/652 (48%), Gaps = 70/652 (10%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 17 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDKS 75
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 76 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYV 132
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFF---PQGPDHVI 172
D RL LGA + E GLGDD E W W + + FF G + I
Sbjct: 133 DQRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFWPAVCE----FFGVEATGEESSI 186
Query: 173 EEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA---- 228
+ +L+ VH M + + G+L +Y N+
Sbjct: 187 RQYELV----VHED---------------------MDVAKVYTGEMGRLKSYENQKPPFD 221
Query: 229 --VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQR 286
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 222 AKNPFLAAVTANRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEI 281
Query: 287 CNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYF 346
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +
Sbjct: 282 LGADLDVIMSLNNLDEESN----KKHPFPCPTTYRTALTYYLDITNP-PRTNVLYELAQY 336
Query: 347 ATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLK 404
A+ E+E L AS EG++ + + RR +L +L+D+PS++ PID L +L+P L+
Sbjct: 337 ASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPIDHLCELLPRLQ 396
Query: 405 TRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAW 460
R +SI+SS HPN VH+ V + R G+ + WL +P + G +P +
Sbjct: 397 ARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMF 456
Query: 461 FQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-D 517
+K P + P+I++GPGTG APF GF++ERA ++ + ++GCR D D
Sbjct: 457 VRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDED 516
Query: 518 FLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLL-SKAS 576
+LYRE L+ DG ++ VAFSR+Q KVYVQH + + +W L+ A
Sbjct: 517 YLYRE-ELARFHKDGALTQLN-----VAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAH 570
Query: 577 IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
IYV G A M DV +TF +IV++ G A +++K L GRY ++ S
Sbjct: 571 IYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVGS 622
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 316/649 (48%), Gaps = 70/649 (10%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 17 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDKS 75
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 76 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYV 132
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFF---PQGPDHVI 172
D RL LGA + E GLGDD E W W + + FF G + I
Sbjct: 133 DQRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFWPAVCE----FFGVEATGEESSI 186
Query: 173 EEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA---- 228
+ +L+ VH M + + G+L +Y N+
Sbjct: 187 RQYELV----VHED---------------------MDVAKVYTGEMGRLKSYENQKPPFD 221
Query: 229 --VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQR 286
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 222 AKNPFLAAVTANRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEI 281
Query: 287 CNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYF 346
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +
Sbjct: 282 LGADLDVIMSLNNLDEESN----KKHPFPCPTTYRTALTYYLDITNP-PRTNVLYELAQY 336
Query: 347 ATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLK 404
A+ E+E L AS EG++ + + RR +L +L+D+PS++ PID L +L+P L+
Sbjct: 337 ASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPIDHLCELLPRLQ 396
Query: 405 TRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAW 460
R +SI+SS HPN VH+ V + R G+ + WL +P + G +P +
Sbjct: 397 ARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMF 456
Query: 461 FQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-D 517
+K P + P+I++GPGTG APF GF++ERA ++ + ++GCR D D
Sbjct: 457 VRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDED 516
Query: 518 FLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLL-SKAS 576
+LYRE L+ DG ++ VAFSR+Q KVYVQH + + +W L+ A
Sbjct: 517 YLYRE-ELARFHKDGALTQLN-----VAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAH 570
Query: 577 IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVE 625
IYV G A M DV +TF +IV++ G A +++K L GRY ++
Sbjct: 571 IYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLD 619
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 197/652 (30%), Positives = 317/652 (48%), Gaps = 70/652 (10%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 17 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDKS 75
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD + + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 76 LVVFAMATYGEGDPTCNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYV 132
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFF---PQGPDHVI 172
D RL LGA + E GLGDD E W W + + FF G + I
Sbjct: 133 DQRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFWPAVAE----FFGVEATGEESSI 186
Query: 173 EEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA---- 228
+ +L+ VH M + + G+L +Y N+
Sbjct: 187 RQYELV----VHED---------------------MDVAKVYTGEMGRLKSYENQKPPFD 221
Query: 229 --VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQR 286
FL + G+ + + H E + + I YE GD + + P+ D A V+ +
Sbjct: 222 AKNPFLAAVTANRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEI 281
Query: 287 CNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYF 346
D D ++++ + + ++ K+ P RT + +D+T+ PR ++ +
Sbjct: 282 LGADLDVIMSLNNLDEESN----KKHPFPTPTTYRTALTYYLDITN-PPRTNVLYELAQY 336
Query: 347 ATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLK 404
A+ E+E L AS EG++ + + RR +L +L+D+PS++ PID L++L+P L+
Sbjct: 337 ASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPIDHLLELLPRLQ 396
Query: 405 TRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAW 460
R +SI+SS HPN VH+T V + R G+ + WL +P + G +P +
Sbjct: 397 ARYYSIASSSKVHPNSVHITAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMF 456
Query: 461 FQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-D 517
K P + P+I++GPGTG APF GF++ERA ++ + ++G R D D
Sbjct: 457 VCKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGARRSDED 516
Query: 518 FLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLL-SKAS 576
+LYRE L+ DG ++ VAFSR+Q KVYVQH + + +W L+ A
Sbjct: 517 YLYRE-ELARFHKDGALTQLN-----VAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAH 570
Query: 577 IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
IYV G A M DV +TF +IV++ G A +++K L GRY ++ WS
Sbjct: 571 IYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVWS 622
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 313/642 (48%), Gaps = 57/642 (8%)
Query: 4 EKRNKLLILYASQTGNALDAAERIGRE-SERRGCPVVVRPVDDYDARCLPEEDTVIFV-V 61
E L+LYASQTG A D A++ +E + V+ V++YD L + ++ + +
Sbjct: 36 ENNKNYLVLYASQTGTAEDYAKKFSKELVAKFNLNVMCADVENYDFESLNDVPVIVSIFI 95
Query: 62 STTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLD 121
ST G+GD PD F F+ L +RY +FGLG+S Y+ FN AKK + L
Sbjct: 96 STYGEGDFPDGAVNFEDFICNAEAGA--LSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSA 153
Query: 122 LGATAVVERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQP 181
GA + + G DD + E + W+ D ++E +K D+
Sbjct: 154 AGAIRLGKLGEADDGAGTTDEDYM------AWK--------------DSILEVLK--DEL 191
Query: 182 KVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKA------VCFLKMI 235
V T L +D++ ++ + G+L +Y N+ FL +
Sbjct: 192 GVEATGEESSIRQYELVVHTDIDAAKVYMG-----EMGRLKSYENQKPPFDAKNPFLAAV 246
Query: 236 KNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALI 295
G+ + + H E + + I YE GD + + P+ D A V+ + D D ++
Sbjct: 247 TTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVM 306
Query: 296 TVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKER 355
++ + + ++ K+ P RT + +D+T+ PR ++ +A+ E+E
Sbjct: 307 SLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQEL 361
Query: 356 LQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSS 413
L+ AS EG++ + + RR +L +L+D PS++ PID L +L+P L+ R +SI+SS
Sbjct: 362 LRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASS 421
Query: 414 PLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP 469
HPN VH+ VV + T R G+ + WL +P + G +P + +K P
Sbjct: 422 SKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLP 481
Query: 470 -PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLS 526
+ P+I++GPGTG APF GF++ERA ++ + ++GCR D D+LYRE L+
Sbjct: 482 FKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYRE-ELA 540
Query: 527 HSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKM 586
DG ++ VAFSR+Q KVYVQH + + + +W L+ A IYV G A M
Sbjct: 541 QFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNM 595
Query: 587 PSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
DV +TF +IV++ G A +++K L GRY ++ WS
Sbjct: 596 ARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 637
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 221/425 (52%), Gaps = 26/425 (6%)
Query: 219 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 272
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 45 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 104
Query: 273 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 332
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 105 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 160
Query: 333 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 390
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 161 -PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 219
Query: 391 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 450
PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 220 PPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 279
Query: 451 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 504
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 280 PVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 339
Query: 505 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 563
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 340 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 393
Query: 564 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 394 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 453
Query: 624 VEAWS 628
++ WS
Sbjct: 454 LDVWS 458
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 220/425 (51%), Gaps = 26/425 (6%)
Query: 219 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 272
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 45 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 104
Query: 273 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 332
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 105 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 160
Query: 333 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 390
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 161 -PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 219
Query: 391 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 450
PID L +L+P L+ +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 220 PPIDHLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 279
Query: 451 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 504
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 280 PVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 339
Query: 505 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 563
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 340 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 393
Query: 564 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 394 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 453
Query: 624 VEAWS 628
++ WS
Sbjct: 454 LDVWS 458
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 196/678 (28%), Positives = 310/678 (45%), Gaps = 96/678 (14%)
Query: 5 KRNKLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTT 64
KR K ILYA++TG + A+ + E + +++YD L E V+ V ST
Sbjct: 10 KRVKATILYATETGKSQAYAKTLC-EIFKHAFDAKAMSMEEYDIVHLEHEALVLVVTSTF 68
Query: 65 GQGDTPDSMKVFWRFLLQ-----------KSLSKQW------------------------ 89
G GD P++ + F L++ KS ++
Sbjct: 69 GNGDPPENGEKFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDLRDNFE 128
Query: 90 ----LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGAL 145
L VR++VFGLG Y F +D L +LG +++ GD+ G E A
Sbjct: 129 STGPLANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDEL--CGQEEAF 186
Query: 146 DPWMRSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEG 205
W + +++ + F G D IE +P + I N S N L
Sbjct: 187 RTWAKKVFKAACDV----FCVGDDVNIE------KPNNSL----ISNDRSWKRNKFRL-- 230
Query: 206 IRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFV-SAAIEYE 264
+ A ++ G LSN + K V +++ Q L S + + ++Y+
Sbjct: 231 --TYVAEAPDLTQG-LSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQ 287
Query: 265 VGDVLEILPSQDPAAVDTFIQRCNLDPDA--LITVQHKEMKNYLPDIHKNTTEV----PI 318
GD L + P V+ I+R P A ++ V+ E +N + N + P
Sbjct: 288 PGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPC 347
Query: 319 KLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRT 378
+ + +D+T+ P + + AT E EK+RL + +G + ++ + T
Sbjct: 348 TIFQAFKYYLDITTP-PTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPT 404
Query: 379 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRK- 437
++EVLE+FPS+QMP L+ + L+ R +SISSSP +P++VHLTV++VS+ T
Sbjct: 405 MVEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGP 464
Query: 438 -RTGLCSVWLAGLDPQQGIYIPAWFQKGS----LPRPPPSVPLILIGPGTGCAPFRGFVE 492
G+CS WL + Q +P F +G+ LPR P VP IL+GPGTG APFR F +
Sbjct: 465 VHHGVCSSWLNRI--QADDVVPC-FVRGAPSFHLPR-NPQVPCILVGPGTGIAPFRSFWQ 520
Query: 493 ERA--IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRK 549
+R IQ P++ FGCR D +YRE L + N GVF E Y A+SR+
Sbjct: 521 QRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETL-QAKNKGVFRE-----LYTAYSRE 574
Query: 550 --QPQKVYVQHKMLEQ-SQRIWNLLLSKAS-IYVAGSATKMPSDVWSTFEEIVSKEGEAS 605
+P+K YVQ + EQ ++ ++ L + IYV G T M +DV + I++++G+ S
Sbjct: 575 PDRPKK-YVQDVLQEQLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLS 632
Query: 606 RDSAANWLKALQRAGRYH 623
+ A ++ L+ RYH
Sbjct: 633 EEDAGVFISRLRDDNRYH 650
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 177/670 (26%), Positives = 292/670 (43%), Gaps = 80/670 (11%)
Query: 4 EKRNKLLILYASQTGNALDAAERIGRE-SERRGCPVVVRPVDDYDARCLPEEDTVIFV-V 61
E L+LYASQTG A D A++ +E + V+ V++YD L + ++ + +
Sbjct: 47 ENNKNYLVLYASQTGTAEDYAKKFSKELVAKFNLNVMCADVENYDFESLNDVPVIVSIFI 106
Query: 62 STTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLD 121
ST G+GD PD F F+ L +RY +FGLG+S Y+ FN AKK + L
Sbjct: 107 STYGEGDFPDGAVNFEDFICNAEAGA--LSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSA 164
Query: 122 LGATAVVERGLGDDQHPSGYEGAL---DPWMRSLWRRLHQIDPSFFPQGPDHVIEEMKLI 178
GA + + G DD + E + D + L LH + +E K
Sbjct: 165 AGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDE------------QEAKFT 212
Query: 179 DQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQ 238
Q + + D+ + +A L ++ R+ +L ++ ++K++
Sbjct: 213 SQFQYTVLNEITDSMSLGEPSAHYLPSHQLN----RNADGIQLGPFDLSQPYIAPIVKSR 268
Query: 239 PLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQ 298
L S ++ H EF+ + I+Y GD L + PS V+ F+ NLDP+ + ++
Sbjct: 269 ELFSSND-RNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLK 327
Query: 299 HKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQY 358
+ +P T + ++ ++E+T V+ R F + FA KE+L
Sbjct: 328 PLDPTVKVP--FPTPTTIGAAIKHYLEITGPVS-----RQLFSSLIQFAPNADVKEKLTL 380
Query: 359 FASPEGRDDLYKYNQKERRTVLEVLEDFPSV----QMPIDWLVQLVPPLKTRAFSISSSP 414
+ + +D + + + L+ +P+ +LV+ VP + R +SISSS
Sbjct: 381 LS--KDKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQFLVESVPQMTPRYYSISSSS 438
Query: 415 LAHPNQVHLTVSVVSWTTPYKRKR---TGLCSVWLAGLDPQQ------------------ 453
L+ VH+T V ++ P G+ + L + Q
Sbjct: 439 LSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNG 498
Query: 454 ------GIYIPAWFQKGSLPRPP-PSVPLILIGPGTGCAPFRGFVEERAI----QSSSGP 502
+P ++ + P PS P+I+IGPGTG APFRGF+ ER Q G
Sbjct: 499 PRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGN 558
Query: 503 AAPI---IFFFGCRNEDDFLYRELWLSHSLN-DGVFSEAKGGGFYVAFSR-KQPQKVYVQ 557
+ I F+G RN DDFLY++ W ++ DG F VA SR +KVYVQ
Sbjct: 559 NVSLGKHILFYGSRNTDDFLYQDEWPEYAKKLDGSFE------MVVAHSRLPNTKKVYVQ 612
Query: 558 HKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQ 617
K+ + +++ ++ + A IYV G A M V + I+S+ + D A +K L+
Sbjct: 613 DKLKDYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLK 672
Query: 618 RAGRYHVEAW 627
+GRY + W
Sbjct: 673 TSGRYQEDVW 682
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 176/670 (26%), Positives = 290/670 (43%), Gaps = 80/670 (11%)
Query: 4 EKRNKLLILYASQTGNALDAAERIGRE-SERRGCPVVVRPVDDYDARCLPEEDTVIFV-V 61
E L+LYASQTG A A+ +E + V+ V++YD L + ++ + +
Sbjct: 47 ENNKNYLVLYASQTGTAEGFAKAFSKELVAKFNLNVMCADVENYDFESLNDVPVIVSIFI 106
Query: 62 STTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLD 121
ST G+GD PD F F+ L +RY +FGLG+S Y+ FN AKK + L
Sbjct: 107 STYGEGDFPDGAVNFEDFICNAEAGA--LSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSA 164
Query: 122 LGATAVVERGLGDDQHPSGYEGAL---DPWMRSLWRRLHQIDPSFFPQGPDHVIEEMKLI 178
GA + + G DD + E + D + L LH + +E K
Sbjct: 165 AGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDE------------QEAKFT 212
Query: 179 DQPKVHITYHSIDNAASRLSNASDLEGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQ 238
Q + + D+ + +A L ++ R+ +L ++ ++K++
Sbjct: 213 SQFQYTVLNEITDSMSLGEPSAHYLPSHQLN----RNADGIQLGPFDLSQPYIAPIVKSR 268
Query: 239 PLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQ 298
L S ++ H EF+ + I+Y GD L + PS V+ F+ NLDP+ + ++
Sbjct: 269 ELFSSND-RNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLK 327
Query: 299 HKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQY 358
+ +P T + ++ ++E+T V+ R F + FA KE+L
Sbjct: 328 PLDPTVKVP--FPTPTTIGAAIKHYLEITGPVS-----RQLFSSLIQFAPNADVKEKLTL 380
Query: 359 FASPEGRDDLYKYNQKERRTVLEVLEDFPSV----QMPIDWLVQLVPPLKTRAFSISSSP 414
+ + +D + + + L+ +P+ +LV+ VP + R +SISSS
Sbjct: 381 LS--KDKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQFLVESVPQMTPRYYSISSSS 438
Query: 415 LAHPNQVHLTVSVVSWTTPYKRKR---TGLCSVWLAGLDPQQ------------------ 453
L+ VH+T V ++ P G+ + L + Q
Sbjct: 439 LSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNG 498
Query: 454 ------GIYIPAWFQKGSLPRPP-PSVPLILIGPGTGCAPFRGFVEERAI----QSSSGP 502
+P ++ + P PS P+I+IGPGTG APFRGF+ ER Q G
Sbjct: 499 PRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGN 558
Query: 503 AAPI---IFFFGCRNEDDFLYRELWLSHSLN-DGVFSEAKGGGFYVAFSR-KQPQKVYVQ 557
+ I F+G RN DDFLY++ W ++ DG F VA SR +KVYVQ
Sbjct: 559 NVSLGKHILFYGSRNTDDFLYQDEWPEYAKKLDGSFE------MVVAHSRLPNTKKVYVQ 612
Query: 558 HKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQ 617
K+ + +++ ++ + A IYV G A M V + I+S+ + D A +K L+
Sbjct: 613 DKLKDYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLK 672
Query: 618 RAGRYHVEAW 627
+GRY + W
Sbjct: 673 TSGRYQEDVW 682
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 215/423 (50%), Gaps = 35/423 (8%)
Query: 221 LSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFV-SAAIEYEVGDVLEILPSQDPAA 279
LSN + K V +++ Q L S + + ++Y+ GD L + P
Sbjct: 22 LSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDL 81
Query: 280 VDTFIQRCNLDPDA--LITVQHKEMKNYLPDIHKNTTEV----PIKLRTFVELTMDVTSA 333
V+ I+R P A ++ V+ E +N + N + P + + +D+T+
Sbjct: 82 VNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTP 141
Query: 334 SPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPI 393
P + + AT E EK+RL + +G + ++ + T++EVLE+FPS+QMP
Sbjct: 142 -PTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFPSIQMPA 198
Query: 394 DWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRK--RTGLCSVWLAGLDP 451
L+ + L+ R +SISSSP +P++VHLTV++VS+ T G+CS WL +
Sbjct: 199 TLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI-- 256
Query: 452 QQGIYIPAWFQKGS----LPRPPPSVPLILIGPGTGCAPFRGFVEERA--IQSSSGPAAP 505
Q +P F +G+ LPR P VP IL+GPGTG APFR F ++R IQ P
Sbjct: 257 QADDVVPC-FVRGAPSFHLPR-NPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCP 314
Query: 506 IIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRK--QPQKVYVQHKMLE 562
++ FGCR D +YRE L + N GVF E Y A+SR+ +P+K YVQ + E
Sbjct: 315 MVLVFGCRQSKIDHIYREETL-QAKNKGVFRE-----LYTAYSREPDRPKK-YVQDVLQE 367
Query: 563 Q-SQRIWNLLLSKAS-IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAG 620
Q ++ ++ L + IYV G T M +DV + I++++G+ S + A ++ L+
Sbjct: 368 QLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDN 426
Query: 621 RYH 623
RYH
Sbjct: 427 RYH 429
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 201/408 (49%), Gaps = 39/408 (9%)
Query: 234 MIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDA 293
++ ++ L + GS + H E E A Y+ GD L ++P V+ R LD
Sbjct: 9 VVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDASQ 67
Query: 294 LITVQHKEMK-NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHE 352
I ++ +E K +LP + E +L +VEL VT R M+ A
Sbjct: 68 QIRLEAEEEKLAHLPLAKTVSVE---ELLQYVELQDPVT-----RTQLRAMAAKTVAPPH 119
Query: 353 KERLQYFASPEGRDDLYKYNQKERR-TVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSIS 411
K L+ + YK +R T+LE+LE +P+ +M + L+P ++ R +SIS
Sbjct: 120 KVELEALLEKQA----YKEQVLAKRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSIS 175
Query: 412 SSPLAHPNQVHLTVSVVS---WTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF----QKG 464
SSP Q +TVSVVS W+ + K G+ S +LA L Q+G I + +
Sbjct: 176 SSPRVDEKQASITVSVVSGEAWSGYGEYK--GIASNYLAEL--QEGDTITCFISTPQSEF 231
Query: 465 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA-APIIFFFGCRN-EDDFLYRE 522
+LP+ P + PLI++GPGTG APFRGFV+ R G + +FGCR+ +D+LY+E
Sbjct: 232 TLPKDPET-PLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQE 290
Query: 523 LWLSHSLNDGVFSEAKGGGFYVAFSR--KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 580
L ++ ++G+ + + AFSR QP K YVQH M + +++ LL A Y+
Sbjct: 291 -ELENAQSEGIIT------LHTAFSRMPNQP-KTYVQHVMEQDGKKLIELLDQGAHFYIC 342
Query: 581 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
G ++M V +T + + + S A WL+ L+ GRY + W+
Sbjct: 343 GDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVWA 390
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 200/408 (49%), Gaps = 39/408 (9%)
Query: 234 MIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDA 293
++ ++ L + GS + H E E A Y+ GD L ++P V+ R LD
Sbjct: 11 VVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDASQ 69
Query: 294 LITVQHKEMK-NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHE 352
I ++ +E K +LP + E +L +VEL VT R M+
Sbjct: 70 QIRLEAEEEKLAHLPLAKTVSVE---ELLQYVELQDPVT-----RTQLRAMAAKTVCPPH 121
Query: 353 KERLQYFASPEGRDDLYKYNQKERR-TVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSIS 411
K L+ + YK +R T+LE+LE +P+ +M + L+P ++ R +SIS
Sbjct: 122 KVELEALLEKQA----YKEQVLAKRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSIS 177
Query: 412 SSPLAHPNQVHLTVSVVS---WTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF----QKG 464
SSP Q +TVSVVS W+ + K G+ S +LA L Q+G I + +
Sbjct: 178 SSPRVDEKQASITVSVVSGEAWSGYGEYK--GIASNYLAEL--QEGDTITCFISTPQSEF 233
Query: 465 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA-APIIFFFGCRN-EDDFLYRE 522
+LP+ P + PLI++GPGTG APFRGFV+ R G + +FGCR+ +D+LY+E
Sbjct: 234 TLPKDPET-PLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQE 292
Query: 523 LWLSHSLNDGVFSEAKGGGFYVAFSR--KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 580
L ++ ++G+ + + AFSR QP K YVQH M + +++ LL A Y+
Sbjct: 293 -ELENAQSEGIIT------LHTAFSRMPNQP-KTYVQHVMEQDGKKLIELLDQGAHFYIC 344
Query: 581 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
G ++M V +T + + + S A WL+ L+ GRY + W+
Sbjct: 345 GDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVWA 392
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 186/408 (45%), Gaps = 39/408 (9%)
Query: 222 SNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVD 281
S Y+ A + NQ +T S KDV H E + + + Y+ GD L + DPA V
Sbjct: 4 SPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVK 63
Query: 282 TFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFE 341
++ L D +TV+ K T + L+ ELT++ +
Sbjct: 64 ELVELLWLKGDEPVTVEGK------------TLPLNEALQWHFELTVNTANIVENYATLT 111
Query: 342 VMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVP 401
+K +LQ++A+ D+ + F Q+ + L+ L+
Sbjct: 112 RSETLLPLVGDKAKLQHYAATTPIVDMVR---------------FSPAQLDAEALINLLR 156
Query: 402 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF 461
PL R +SI+SS N+VH+TV VV + R R G S +LA ++G + +
Sbjct: 157 PLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEG-EVRVFI 214
Query: 462 QKGSLPRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFL 519
+ R P P P+I+IGPGTG APFR F+++RA + P +FF +DFL
Sbjct: 215 EHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRA--ADEAPGKNWLFFGNPHFTEDFL 272
Query: 520 YRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYV 579
Y+ W + + +GV + +A+SR Q +KVYVQ K+ EQ +W + A IYV
Sbjct: 273 YQVEWQRY-VKEGVLTRID-----LAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYV 326
Query: 580 AGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 627
G A +M DV E++++ G ++A +L L+ RY + +
Sbjct: 327 CGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 374
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 205/463 (44%), Gaps = 50/463 (10%)
Query: 204 EGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 263
E +++ L+ + ++S + V + + K LT + + K E + + Y
Sbjct: 89 EYLQVHLQESLGQEESQVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSY 148
Query: 264 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 323
+ GD ++ + V + +QR L+ +H + D K +P +
Sbjct: 149 QPGDAFSVICPNSDSEVQSLLQRLQLEDKR----EHXVLLKIKADTKKKGATLPQHIPAG 204
Query: 324 VELTMDVT-----SASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRT 378
L T A P++ F + + + EK RLQ S +G D ++ +
Sbjct: 205 CSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAXAC 264
Query: 379 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSW--TTPYKR 436
+L++L FPS Q P+ L++ +P L+ R +S +SS L HP ++H ++V + T +
Sbjct: 265 LLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEV 324
Query: 437 KRTGLCSVWLA--------------------GLDPQQGIYIPAWFQKGSLPRPPPSVPLI 476
R G+C+ WLA L P+ I+ P LP PS+P+I
Sbjct: 325 LRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKISIF-PRTTNSFHLPD-DPSIPII 382
Query: 477 LIGPGTGCAPFRGFVEERAI---QSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDG 532
++GPGTG APF GF++ R Q G + FFGCR++D D+L+R+ L H L G
Sbjct: 383 MVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRK-ELRHFLKHG 441
Query: 533 VFSEAKGGGFYVAFSRKQP------QKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATK 585
+ + K V+FSR P YVQ + Q++ +LL + IYV G A
Sbjct: 442 ILTHLK-----VSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKN 496
Query: 586 MPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
M DV +I+SKE + A L L+ RY + WS
Sbjct: 497 MAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIWS 539
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 205/463 (44%), Gaps = 50/463 (10%)
Query: 204 EGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 263
E +++ L+ + ++S + V + + K LT + + K E + + Y
Sbjct: 89 EYLQVHLQESLGQEESQVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSY 148
Query: 264 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 323
+ GD ++ + V + +QR L+ +H + D K +P +
Sbjct: 149 QPGDAFSVICPNSDSEVQSLLQRLQLEDKR----EHXVLLKIKADTKKKGATLPQHIPAG 204
Query: 324 VELTMDVT-----SASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRT 378
L T A P++ F + + + EK RLQ S +G D ++ +
Sbjct: 205 XSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAXAC 264
Query: 379 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSW--TTPYKR 436
+L++L FPS Q P+ L++ +P L+ R +S +SS L HP ++H ++V + T +
Sbjct: 265 LLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEV 324
Query: 437 KRTGLCSVWLA--------------------GLDPQQGIYIPAWFQKGSLPRPPPSVPLI 476
R G+C+ WLA L P+ I+ P LP PS+P+I
Sbjct: 325 LRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKISIF-PRTTNSFHLPD-DPSIPII 382
Query: 477 LIGPGTGCAPFRGFVEERAI---QSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDG 532
++GPGTG APF GF++ R Q G + FFGCR++D D+L+R+ L H L G
Sbjct: 383 MVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRK-ELRHFLKHG 441
Query: 533 VFSEAKGGGFYVAFSRKQP------QKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATK 585
+ + K V+FSR P YVQ + Q++ +LL + IYV G A
Sbjct: 442 ILTHLK-----VSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKN 496
Query: 586 MPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 628
M DV +I+SKE + A L L+ RY + WS
Sbjct: 497 MAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIWS 539
>pdb|1B1C|A Chain A, Crystal Structure Of The Fmn-Binding Domain Of Human
Cytochrome P450 Reductase At 1.93a Resolution
Length = 181
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 1 MREEKRNKLLILYASQTGNALDAAERIGRESER---RGCPVVVRPVDDYDARCLPEEDT- 56
M++ RN +++ Y SQTG A + A R+ +++ R RG D D LPE D
Sbjct: 13 MKKTGRN-IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDNA 71
Query: 57 -VIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKL 115
V+F ++T G+GD D+ + F+ +L + + L GV++AVFGLG+ Y+ FN + K +
Sbjct: 72 LVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYV 128
Query: 116 DNRLLDLGATAVVERGLGDDQHPSGYEGALDPWMRSLW 153
D RL LGA + E GLGDD E W W
Sbjct: 129 DKRLEQLGAQRIFELGLGDDD--GNLEEDFITWREQFW 164
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|C Chain C, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|E Chain E, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|G Chain G, Human Inos Reductase And Calmodulin Complex
Length = 219
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 6 RNKLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTTG 65
R ++ IL+A++TG + A +G P VV +D Y CL EE ++ V ST G
Sbjct: 40 RVRVTILFATETGKSEALAWDLGALFSCAFNPKVV-CMDKYRLSCLEEERLLLVVTSTFG 98
Query: 66 QGDTP-DSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGA 124
GD P + K+ + K L+ ++ RYAVFGLG S Y +F A +D +L LGA
Sbjct: 99 NGDCPGNGEKLKKSLFMLKELNNKF----RYAVFGLGSSMYPRFCAFAHDIDQKLSHLGA 154
Query: 125 TAVVERGLGDDQHPSGYEGALDPW 148
+ + G GD+ SG E A W
Sbjct: 155 SQLTPMGEGDEL--SGQEDAFRSW 176
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS L V L V + +T G+CS +L L P + I
Sbjct: 89 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEVVKGVCSNFLCDLKPGAEVKIT 148
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++ GTG APFR F+ EE +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLA---WLFLGVP 205
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF--SRKQP----QKVYVQHKMLEQSQRI 567
D LY+E E F + F SR+Q +K+Y+Q +M E + +
Sbjct: 206 TSDTLLYKEELEK-------MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEEL 258
Query: 568 WNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYH 623
W LL K + YV K M + ++ +K+G NWL K L+++ +++
Sbjct: 259 WE-LLKKDNTYVYMCGLKGMEKGIDDIMLDLAAKDG-------INWLDYKKQLKKSEQWN 310
Query: 624 VEAW 627
VE +
Sbjct: 311 VEVY 314
>pdb|1YKG|A Chain A, Solution Structure Of The Flavodoxin-Like Domain From The
Escherichia Coli Sulfite Reductase
Length = 167
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
Query: 9 LLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTTGQGD 68
+ I+ ASQTGNA AE + + V + DY + + E +I V ST G+G+
Sbjct: 12 ITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGE 71
Query: 69 TPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVV 128
P+ +FL K K LE +AVF LGD+ Y+ F K D++L +LG ++
Sbjct: 72 PPEEAVALHKFLFSKKAPK--LENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLL 129
Query: 129 ERGLGDDQHPSGYEGALDPWMRSLWRRLHQIDPSFFP 165
+R D + Y+ A W + L P P
Sbjct: 130 DRVDADVE----YQAAASEWRARVVDALKSRAPVAAP 162
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 36/244 (14%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS L V L V + +T G+CS +L L P + I
Sbjct: 85 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGADVKIT 144
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRG-----FVEERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++ GTG APFR F+EE SG A F G
Sbjct: 145 GPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLA---WLFLGVP 201
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF--SRKQP----QKVYVQHKMLEQSQRI 567
D LY+E E F + F SR+Q +K+Y+Q +M E + +
Sbjct: 202 TSDSLLYKEELEK-------MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREEL 254
Query: 568 WNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYH 623
W LL K + YV K M + + +K+G +W+ K L++ +++
Sbjct: 255 WE-LLKKDNTYVYMCGLKGMEKGIDDIMLNLAAKDG-------IDWMQYKKQLKKGEQWN 306
Query: 624 VEAW 627
VE +
Sbjct: 307 VEVY 310
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 438 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 496
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 125 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184
Query: 497 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 552
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 185 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 239
Query: 553 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 610
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 294
Query: 611 NWLKALQRAGRYHVEAW 627
L L++ ++HVE +
Sbjct: 295 QKLAQLKKNKQWHVEVY 311
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 438 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 496
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 130 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 189
Query: 497 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 552
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 190 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 244
Query: 553 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 610
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 245 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 299
Query: 611 NWLKALQRAGRYHVEAW 627
L L++ ++HVE +
Sbjct: 300 QKLAQLKKNKQWHVEVY 316
>pdb|1BVY|F Chain F, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 191
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 9 LLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTTGQGD 68
LL+LY S G A A + + +G V +D + A LP E V+ +V+ + G
Sbjct: 24 LLVLYGSNMGTAEGTARDLADIAMSKGFAPQVATLDSH-AGNLPREGAVL-IVTASYNGH 81
Query: 69 TPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGD----SGYQKFNFVAKKLDNRLLDLGA 124
PD+ K F +L Q S + ++GVRY+VFG GD + YQK V +D L GA
Sbjct: 82 PPDNAKQFVDWLDQASADE--VKGVRYSVFGCGDKNWATTYQK---VPAFIDETLAAKGA 136
Query: 125 TAVVERGLGDDQHPSGYEGALDPWMRSLW 153
+ +RG D +EG + W +W
Sbjct: 137 ENIADRGEAD--ASDDFEGTYEEWREHMW 163
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 438 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 496
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 125 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184
Query: 497 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 552
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 185 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 239
Query: 553 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 610
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 294
Query: 611 NWLKALQRAGRYHVE 625
L L++ ++HVE
Sbjct: 295 QKLAQLKKNKQWHVE 309
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 89 PHKVRLYSIASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDLQPGDNVQIT 148
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPII--FFFGCRNED 516
K L P+ +I++ GTG APFR F+ + + + F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSS 208
Query: 517 DFLYRELWLSHSLNDGVFSEAKGGGFYV--AFSRKQP----QKVYVQHKMLEQSQRIWNL 570
LY+E + G E F V A SR+Q +++Y+Q +M E + +W
Sbjct: 209 SLLYKEEF-------GKMKERAPENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWE- 260
Query: 571 LLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
LL K + YV K M + + K+G +W K L+R +++VE
Sbjct: 261 LLKKDNTYVYMCGLKGMEKGIDDIMVSLAEKDG-------IDWFDYKKQLKRGDQWNVEV 313
Query: 627 W 627
+
Sbjct: 314 Y 314
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS L V L V + +T + G+CS +L L P + I
Sbjct: 71 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDLKPGADVKIT 130
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 131 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 187
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 569
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 188 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWT 242
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 627
LL + M + + +KEG A++ K L++A +++VE +
Sbjct: 243 LLKKDNTFVYMCGLKGMEQGIDDIMSSLAAKEG----IDWADYKKQLKKAEQWNVEVY 296
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE W
Sbjct: 301 VETW 304
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPLGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 624 VEAW 627
VE +
Sbjct: 292 VETY 295
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 569
LY + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLY-----KEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 627 W 627
W
Sbjct: 308 W 308
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNEKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LEGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 624 VEAW 627
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKDRDYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 624 VEAW 627
VE +
Sbjct: 292 VETY 295
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKKMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 624 VEAW 627
VE +
Sbjct: 300 VETY 303
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 624 VEAW 627
VE +
Sbjct: 300 VETY 303
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 624 VEAW 627
VE +
Sbjct: 300 VETY 303
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRDYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 624 VEAW 627
VE +
Sbjct: 292 VETY 295
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DELWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 624 VEAW 627
VE +
Sbjct: 300 VETY 303
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLAGGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 624 VEAW 627
VE +
Sbjct: 292 VETY 295
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEA 626
VE
Sbjct: 301 VET 303
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DELWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 624 VEAW 627
VE +
Sbjct: 300 VETF 303
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PERLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGATVYGVCSTYLTHIEPGSEV 130
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 624 VEA 626
VE
Sbjct: 300 VET 302
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEQLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEELRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 624 VEAW 627
VE +
Sbjct: 292 VETY 295
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PESLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 624 VEAW 627
VE +
Sbjct: 300 VETY 303
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICGPPP-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 569
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGVKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 627 W 627
+
Sbjct: 308 Y 308
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEAW 627
V +
Sbjct: 301 VATY 304
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 70 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 129
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 130 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 186
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 569
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 187 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 241
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 242 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 294
Query: 627 W 627
+
Sbjct: 295 Y 295
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 569
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 627 W 627
+
Sbjct: 308 Y 308
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 569
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMMGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 627 W 627
+
Sbjct: 308 Y 308
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 31/243 (12%)
Query: 402 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 455
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 456 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 509
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 510 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 564
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 565 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 623
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DELWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 624 VEA 626
VE
Sbjct: 301 VET 303
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 224 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 273
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 30/240 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 569
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
>pdb|1J9E|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S35c Mutant At 1.44 Angstrom Resolution
pdb|1XT6|A Chain A, S35c Flavodoxin Mutant In The Semiquinone State
Length = 147
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDCRDAASVEAGGLFEGFDLVLLGCSTWGD 61
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
DS+++ F+ L SL + +G + A FG GDS Y+ F ++ +L +LGA
Sbjct: 62 ----DSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA- 116
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 117 EIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1J8Q|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris Wild-Type At 1.35 Angstrom Resolution
pdb|2FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|3FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|4FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|5FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
Length = 147
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 61
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
DS+++ F+ L SL + +G + A FG GDS Y+ F ++ +L +LGA
Sbjct: 62 ----DSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA- 116
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 117 EIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1BU5|A Chain A, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
pdb|1BU5|B Chain B, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
Length = 147
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 61
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
DS+++ F+ L SL + +G + A FG GDS Y+ F ++ +L +LGA
Sbjct: 62 ----DSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA- 116
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 117 EIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1FX1|A Chain A, A Crystallographic Structural Study Of The Oxidation
States Of Desulfovibrio Vulgaris Flavodoxin
Length = 148
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I R+ G V R +A L E D V+ ST G
Sbjct: 3 KALIVYGSTTGNTEYTAETIARQLANAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 62
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
DS+++ F+ L SL + +G + A FG GDS Y+ F ++ +L +LGA
Sbjct: 63 ----DSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA- 117
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 118 EIVQDGLRIDGDPRAARDDIVGW 140
>pdb|1C7E|A Chain A, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7E|B Chain B, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|A Chain A, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|B Chain B, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 61
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
DS+++ F+ L SL + +G + A FG G+S Y+ F ++ +L +LGA
Sbjct: 62 ----DSIELQDDFIPLFDSLEETGAQGRKVACFGCGESSYEYFCGAVDAIEEKLKNLGA- 116
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 117 EIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKT|A Chain A, G61n Oxidized Flavodoxin Mutant
Length = 147
Score = 52.8 bits (125), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTTGQG 67
K LI+Y S TGN AE I RE G V R +A L E ++ + +T
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWND 61
Query: 68 DTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAV 127
D+ + F L SL + +G + A FG GDS Y+ F ++ +L +LGA +
Sbjct: 62 DSIELQDDF--IPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EI 118
Query: 128 VERGLGDDQHPSGYEGALDPW 148
V+ GL D P + W
Sbjct: 119 VQDGLRIDGDPRAARDDIVGW 139
>pdb|1WSB|A Chain A, Flavodoxin Mutant- S64c
pdb|1WSW|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Dimer, Semiquinone State
pdb|1XYV|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Monomer, Semiquinone State
pdb|1XYY|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Homodimer, Oxidised State
Length = 148
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 3 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 62
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
D +++ F+ L SL + +G + A FG GDS Y+ F ++ +L +LGA
Sbjct: 63 ----DCIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA- 117
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 118 EIVQDGLRIDGDPRAARDDIVGW 140
>pdb|1J9G|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S64c Mutant, Monomer Oxidised, At 2.4 Angstrom
Resolution
Length = 147
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 61
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
D +++ F+ L SL + +G + A FG GDS Y+ F ++ +L +LGA
Sbjct: 62 ----DCIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA- 116
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 117 EIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1F4P|A Chain A, Y98w Flavodoxin Mutant 1.5a (D. Vulgaris)
Length = 147
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 61
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
DS+++ F+ L SL + +G + A FG GDS ++ F ++ +L +LGA
Sbjct: 62 ----DSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGA- 116
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 117 EIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1I1O|A Chain A, Room Temperature Crystal Structure Flavodoxin D. Vulgaris
Mutant Y98h At 2.0 Ang. Resolution
Length = 147
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 61
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
DS+++ F+ L SL + +G + A FG GDS ++ F ++ +L +LGA
Sbjct: 62 ----DSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSHEYFCGAVDAIEEKLKNLGA- 116
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 117 EIVQDGLRIDGDPRAARDDIVGW 139
>pdb|4HEQ|A Chain A, The Crystal Structure Of Flavodoxin From Desulfovibrio
Gigas
pdb|4HEQ|B Chain B, The Crystal Structure Of Flavodoxin From Desulfovibrio
Gigas
Length = 146
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPE-EDTVIFVVSTTGQ 66
K LI+Y S TGN AE I + G V V D A L E D V+ ST G
Sbjct: 3 KALIVYGSTTGNTEGVAEAIAKTLNSEGMETTVVNVADVTAPGLAEGYDVVLLGCSTWGD 62
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
D +++ F+ L + L + L+ + VFG GDS Y F ++ + +LGAT
Sbjct: 63 ----DEIELQEDFVPLYEDLDRAGLKDKKVGVFGCGDSSYTYFCGAVDVIEKKAEELGAT 118
Query: 126 AVVERGLGDDQHPSGYEGALDPWMRSLWRRL 156
+V L D P E LD W R + R+
Sbjct: 119 -LVASSLKIDGEPDSAE-VLD-WAREVLARV 146
>pdb|1AKR|A Chain A, G61a Oxidized Flavodoxin Mutant
Length = 147
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTTGQG 67
K LI+Y S TGN AE I RE G V R +A L E ++ + +T
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWAD 61
Query: 68 DTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAV 127
D+ + F L SL + +G + A FG GDS Y+ F ++ +L +LGA +
Sbjct: 62 DSIELQDDF--IPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EI 118
Query: 128 VERGLGDDQHPSGYEGALDPW 148
V+ GL D P + W
Sbjct: 119 VQDGLRIDGDPRAARDDIVGW 139
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 33/238 (13%)
Query: 402 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF 461
P K R +SI+SS + TVS+ KR G+CS +L L P + I
Sbjct: 98 PHKLRLYSIASSAIGDFGDSK-TVSLC-----VKRVPDGVCSNFLCDLKPGSEVKITGPV 151
Query: 462 QKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCRNED 516
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 152 GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLA---WLFLGVPTSS 208
Query: 517 DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWNLLL 572
LY + A SR+Q +K+Y+Q +M + ++ +W LL
Sbjct: 209 SLLY-----KEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLK 263
Query: 573 SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEAW 627
+ M + + +K+G +W+ + L++A +++VE +
Sbjct: 264 KDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEVY 314
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 32/242 (13%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 569
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 570 LLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVE 625
+L K + YV K M + + + EG +W+ + L++A +++VE
Sbjct: 261 -MLKKDNTYVYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVE 312
Query: 626 AW 627
+
Sbjct: 313 VY 314
>pdb|1AKW|A Chain A, G61l Oxidized Flavodoxin Mutant
Length = 147
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTTGQG 67
K LI+Y S TGN AE I RE G V R +A L E ++ + +T
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWLD 61
Query: 68 DTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAV 127
D+ + F L SL + +G + A FG GDS Y+ F ++ +L +LGA +
Sbjct: 62 DSIELQDDF--IPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EI 118
Query: 128 VERGLGDDQHPSGYEGALDPW 148
V+ GL D P + W
Sbjct: 119 VQDGLRIDGDPRAARDDIVGW 139
>pdb|1AZL|A Chain A, G61v Flavodoxin Mutant From Desulfovibrio Vulgaris
Length = 147
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTTGQG 67
K LI+Y S TGN AE I RE G V R +A L E ++ + +T
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWVD 61
Query: 68 DTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAV 127
D+ + F L SL + +G + A FG GDS Y+ F ++ +L +LGA +
Sbjct: 62 DSIELQDDF--IPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EI 118
Query: 128 VERGLGDDQHPSGYEGALDPW 148
V+ GL D P + W
Sbjct: 119 VQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKQ|A Chain A, D95a Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1AKU|A Chain A, D95a Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1AKV|A Chain A, D95a Semiquinone Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPEE-DTVIFVVSTTGQ 66
K LI+Y S TGN AE I RE G V R +A L E D V+ ST G
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGD 61
Query: 67 GDTPDSMKVFWRFL-LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGAT 125
DS+++ F+ L SL + +G + A FG G S Y+ F ++ +L +LGA
Sbjct: 62 ----DSIELQDDFIPLFDSLEETGAQGRKVACFGCGASSYEYFCGAVDAIEEKLKNLGA- 116
Query: 126 AVVERGLGDDQHPSGYEGALDPW 148
+V+ GL D P + W
Sbjct: 117 EIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 569
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
+L + + M + + + EG +W+ + L++A +++V+
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVQV 313
Query: 627 W 627
+
Sbjct: 314 Y 314
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R + I+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYVIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 569
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
+L + + M + + + EG +W+ + L++A +++VE
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVEV 313
Query: 627 W 627
+
Sbjct: 314 Y 314
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 20/213 (9%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 569
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 602
+L + + M + + + EG
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG 293
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 402 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 458
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 459 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 513
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 514 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 569
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 570 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 626
+L + + M + + + EG +W+ + L++A +++V
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVAV 313
Query: 627 W 627
+
Sbjct: 314 Y 314
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 12/169 (7%)
Query: 440 GLCSVWLAGLDPQQGIYIPA-WFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQS 498
G+CS ++ L P + + +K LP S ++ + GTG APF G EE
Sbjct: 132 GVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHK 191
Query: 499 SSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-----K 553
I +G D+ + + G+ S+ K A SR++ +
Sbjct: 192 LIKFTGNITLVYGAPYSDELVMMDYL------KGLESKHKNFKLITAISREEKNSFDGGR 245
Query: 554 VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 602
+Y+ H++ EQ++ + +L Y+ G M V ++I G
Sbjct: 246 MYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTG 294
>pdb|3F6R|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|C Chain C, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6S|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|E Chain E, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|F Chain F, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|H Chain H, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|I Chain I, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|G Chain G, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F90|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|E Chain E, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|F Chain F, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|H Chain H, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|I Chain I, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|G Chain G, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
Length = 148
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 7 NKLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPE-EDTVIFVVSTTG 65
+K+LI++ S TGN A+++ G V + D A L + D V+F S G
Sbjct: 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADASAENLADGYDAVLFGCSAWG 61
Query: 66 QGD---TPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDL 122
D D + +F F + L G + A F GD Y+ F ++ R +L
Sbjct: 62 MEDLEMQDDFLSLFEEF------DRIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKEL 115
Query: 123 GATAVVE 129
GAT + E
Sbjct: 116 GATIIAE 122
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 30/242 (12%)
Query: 402 PLKTRAFSISSS---PLAHPNQVHLTVSVVSWTTPYKRKRT-GLCSVWLAGLD-PQQGIY 456
P K R +SI+S+ + V L V + + P + G+CS +L L +
Sbjct: 175 PHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVK 234
Query: 457 IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFG 511
I K L ++++ GTG APFR F+ E+ G A I FG
Sbjct: 235 ITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLI---FG 291
Query: 512 CRNEDDFLYRELWLSHSL-NDGVFSEAKGGGFYVAFSRKQPQ----KVYVQHKMLEQSQR 566
+ LY++ + + N F A SR+Q KVYVQ ++ E +
Sbjct: 292 VPYTANILYKDDFEKMAAENPDNFR------LTYAISREQKTADGGKVYVQSRVSEYADE 345
Query: 567 IWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVE 625
++ ++ +Y+ G P +E + E E + +++++ R+HVE
Sbjct: 346 LFEMIQKPNTHVYMCGLKGMQPP-----IDETFTAEAEKRGLNWEEMRRSMKKEHRWHVE 400
Query: 626 AW 627
+
Sbjct: 401 VY 402
>pdb|2HNA|A Chain A, Solution Structure Of A Bacterial Apo-Flavodoxin
pdb|2HNB|A Chain A, Solution Structure Of A Bacterial Holo-Flavodoxin
Length = 147
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 51 LPEEDTVIFVVSTTGQGDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNF 110
LP + + ST G GD PD++ F+ L ++ K L VR+ G+G Y F
Sbjct: 44 LPASGIWLVISSTHGAGDIPDNLSPFYEALQEQ---KPDLSAVRFGAIGIGSREYDTFCG 100
Query: 111 VAKKLDNRLLDLGATAVVE 129
KL+ L + GA E
Sbjct: 101 AIDKLEAELKNSGAKQTGE 119
>pdb|2FCR|A Chain A, Crystal Structure Of Oxidized Flavodoxin From A Red Alga
Chondrus Crispus Refined At 1.8 Angstroms Resolution:
Description Of The Flavin Mononucleotide Binding Site
Length = 173
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 8 KLLILYASQTGNALDAAERIGRE-SERRGCPVVVRPVDDYDARCLPEEDTVIFVVSTTGQ 66
K+ I +++ TGN + A+ IG+ + P+ V V D A L + D + T
Sbjct: 1 KIGIFFSTSTGNTTEVADFIGKTLGAKADAPIDVDDVTDPQA--LKDYDLLFLGAPTWNT 58
Query: 67 GDTPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDS-GY 105
G + W L L + ++ + A+FGLGD+ GY
Sbjct: 59 GADTERSGTSWDEFLYDKLPEVDMKDLPVAIFGLGDAEGY 98
>pdb|1MQS|A Chain A, Crystal Structure Of Sly1p In Complex With An N-Terminal
Peptide Of Sed5p
Length = 671
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 223 NYNNKAVCFLKMIKNQP-LTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVD 281
N NN V +++K P LT + D H F + + +E + ++D
Sbjct: 377 NSNNDTVQIQEVVKKLPELTAKKNTIDTHXNIFAALLSQLESK--------------SLD 422
Query: 282 TFIQRCNLDPDALITVQHKEMKNYLPDIHKN--TTEVPIKLRTFVELTMDVTSASPRRYF 339
TF + DP + T ++ DI K+ T + KLR+F+ L + T+ P+ +
Sbjct: 423 TFFE-VEQDPGSTKT------RSRFLDILKDGKTNNLEDKLRSFIVLYLTSTTGLPKDFV 475
Query: 340 FEVMSYFATAEHEKERLQY 358
V +YF +++ L+Y
Sbjct: 476 QNVENYFKENDYDINALKY 494
>pdb|3KAP|A Chain A, Flavodoxin From Desulfovibrio Desulfuricans Atcc 27774
(Oxidized Form)
pdb|3KAQ|A Chain A, Flavodoxin From D. Desulfuricans (Semireduced Form)
Length = 147
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 11/154 (7%)
Query: 7 NKLLILYASQTGNALDAAERIGRESERRGCPVVVRPVDDYDARCLPE-EDTVIFVVSTTG 65
+K+LIL+ S TGN A+++ G V + + A L + D V+ S G
Sbjct: 1 SKVLILFGSSTGNTESIAQKLEELVAAGGHEVTLLNAAEASADNLADGYDAVLMGCSAWG 60
Query: 66 QGD---TPDSMKVFWRFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDL 122
D D +F + L+G + A F GD Y+ + ++ + L
Sbjct: 61 MEDLELQDDFAPLF------DEMENMGLKGKKLAAFASGDMEYEHYCGAVPAIEEKARGL 114
Query: 123 GATAVVERGLGDDQHPSGYEGALDPWMRSLWRRL 156
GA + E GL + S A+ + + ++L
Sbjct: 115 GAEVICE-GLKIEGDASSDPDAVSAFAEDVLKKL 147
>pdb|2KQ9|A Chain A, Solution Structure Of Dnak Suppressor Protein From
Agrobacterium Tumefaciens C58. Northeast Structural
Genomics Consortium Target Att12ONTARIO CENTER FOR
STRUCTURAL PROTEOMICS TARGET ATC0888
Length = 112
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 16/81 (19%)
Query: 133 GDDQHPSGYEGALDPWMRSLWRRLHQIDPSF-FPQGP-----------DHVIEEMKLIDQ 180
G + YE L R L+RRLH+I+ F P+ P D V++E+ + Q
Sbjct: 4 GKSMNVESYEKILRDRQRELYRRLHKIEADFEEPRNPDDEDRASERSNDEVLDELGQVGQ 63
Query: 181 PKVHITYHSIDNAASRLSNAS 201
++ +ID A +R+++ +
Sbjct: 64 DEL----RAIDAALARIASGT 80
>pdb|2INY|A Chain A, Nanoporous Crystals Of Chicken Embryo Lethal Orphan (celo)
Adenovirus Major Coat Protein, Hexon
Length = 942
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 326 LTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVL 380
LT D+T+A+PR +F + T E+ E LQ F S G + K R+TV+
Sbjct: 4 LTPDLTTATPRLQYFHIAGP-GTREYLSEDLQQFISATGS--YFDLKNKFRQTVV 55
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,601,807
Number of Sequences: 62578
Number of extensions: 852257
Number of successful extensions: 2359
Number of sequences better than 100.0: 110
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2025
Number of HSP's gapped (non-prelim): 152
length of query: 628
length of database: 14,973,337
effective HSP length: 105
effective length of query: 523
effective length of database: 8,402,647
effective search space: 4394584381
effective search space used: 4394584381
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)