Query 006870
Match_columns 628
No_of_seqs 151 out of 209
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 11:08:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006870.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006870hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ypd_A Probable JMJC domain-co 100.0 4E-134 1E-138 1061.6 16.0 353 165-591 20-375 (392)
2 4gjz_A Lysine-specific demethy 99.3 1.2E-12 4.1E-17 126.1 7.1 37 504-540 197-233 (235)
3 3k2o_A Bifunctional arginine d 99.3 1.3E-10 4.3E-15 122.1 18.0 243 168-556 56-304 (336)
4 2yu1_A JMJC domain-containing 99.2 5.2E-10 1.8E-14 121.7 19.1 83 504-588 262-344 (451)
5 3kv5_D JMJC domain-containing 99.1 4.6E-10 1.6E-14 123.2 16.5 87 505-593 333-419 (488)
6 3k3o_A PHF8, PHD finger protei 99.1 8.2E-10 2.8E-14 117.5 16.2 89 504-595 213-302 (371)
7 3kv4_A PHD finger protein 8; e 99.1 9.2E-10 3.1E-14 119.7 16.8 88 505-595 298-386 (447)
8 3kv9_A JMJC domain-containing 99.1 2.2E-09 7.6E-14 115.1 17.5 86 505-593 242-328 (397)
9 3pua_A GRC5, PHD finger protei 99.1 2.4E-09 8.3E-14 114.5 17.0 87 504-593 240-327 (392)
10 3al5_A HTYW5, JMJC domain-cont 99.0 4.8E-10 1.6E-14 117.1 8.2 42 505-546 237-278 (338)
11 3d8c_A Hypoxia-inducible facto 98.9 4.1E-10 1.4E-14 118.3 5.0 40 504-543 257-297 (349)
12 3pur_A Lysine-specific demethy 98.5 2E-06 6.7E-11 95.0 16.6 51 505-555 363-413 (528)
13 2xxz_A Lysine-specific demethy 97.8 3.5E-05 1.2E-09 81.0 7.4 85 444-547 234-318 (332)
14 3avr_A Lysine-specific demethy 97.7 9.9E-05 3.4E-09 81.9 9.3 88 444-550 293-380 (531)
15 4ask_A Lysine-specific demethy 97.3 0.00032 1.1E-08 77.1 7.9 86 444-548 268-353 (510)
16 3dxt_A JMJC domain-containing 96.7 0.0021 7.2E-08 68.1 6.8 92 446-549 211-303 (354)
17 3opt_A DNA damage-responsive t 96.3 0.0076 2.6E-07 64.3 7.9 91 446-548 254-345 (373)
18 2ox0_A JMJC domain-containing 95.9 0.0098 3.4E-07 63.7 6.9 94 445-550 228-322 (381)
19 1vrb_A Putative asparaginyl hy 95.0 0.032 1.1E-06 58.4 6.8 57 505-564 215-281 (342)
20 2opk_A Hypothetical protein; p 92.7 0.039 1.3E-06 48.1 1.8 24 510-533 75-98 (112)
21 1yhf_A Hypothetical protein SP 92.6 0.067 2.3E-06 45.5 3.1 58 481-545 57-114 (115)
22 2pfw_A Cupin 2, conserved barr 92.4 0.052 1.8E-06 46.3 2.1 57 481-545 51-107 (116)
23 3fjs_A Uncharacterized protein 92.2 0.068 2.3E-06 46.5 2.6 54 486-545 57-110 (114)
24 3ht1_A REMF protein; cupin fol 92.2 0.089 3E-06 46.3 3.4 41 505-545 76-116 (145)
25 3h8u_A Uncharacterized conserv 91.9 0.091 3.1E-06 45.5 3.1 38 507-544 78-115 (125)
26 2q30_A Uncharacterized protein 91.8 0.057 2E-06 45.2 1.7 36 507-544 73-108 (110)
27 1v70_A Probable antibiotics sy 91.6 0.095 3.2E-06 42.9 2.7 38 507-544 66-103 (105)
28 3lag_A Uncharacterized protein 91.4 0.074 2.5E-06 45.7 1.9 24 510-533 61-84 (98)
29 2xlg_A SLL1785 protein, CUCA; 91.1 0.11 3.8E-06 52.0 3.2 75 481-558 60-163 (239)
30 4e2g_A Cupin 2 conserved barre 91.1 0.13 4.6E-06 44.4 3.4 58 481-545 58-115 (126)
31 1juh_A Quercetin 2,3-dioxygena 90.7 0.12 4E-06 54.0 3.0 40 509-549 292-332 (350)
32 2b8m_A Hypothetical protein MJ 90.5 0.1 3.5E-06 44.7 2.1 35 511-545 69-105 (117)
33 2gu9_A Tetracenomycin polyketi 90.5 0.12 4E-06 43.2 2.3 41 505-545 59-99 (113)
34 2ozj_A Cupin 2, conserved barr 90.3 0.1 3.5E-06 44.6 1.9 48 485-537 58-105 (114)
35 3ibm_A Cupin 2, conserved barr 90.2 0.12 4.2E-06 48.3 2.4 59 481-545 73-132 (167)
36 2fqp_A Hypothetical protein BP 90.2 0.15 5E-06 42.8 2.7 25 509-533 60-84 (97)
37 3d82_A Cupin 2, conserved barr 90.0 0.15 5E-06 42.1 2.5 27 509-535 69-95 (102)
38 3kgz_A Cupin 2 conserved barre 89.9 0.21 7E-06 46.5 3.7 59 481-545 61-119 (156)
39 1o5u_A Novel thermotoga mariti 89.8 0.1 3.5E-06 45.3 1.4 31 507-537 67-97 (101)
40 3h7j_A Bacilysin biosynthesis 89.2 0.16 5.4E-06 50.0 2.4 59 481-545 163-221 (243)
41 2i45_A Hypothetical protein; n 89.1 0.15 5E-06 43.2 1.9 60 481-548 44-104 (107)
42 2dip_A Zinc finger SWIM domain 89.0 0.13 4.4E-06 45.3 1.4 32 1-32 32-65 (98)
43 2ozi_A Hypothetical protein RP 87.8 0.16 5.5E-06 43.8 1.3 24 511-534 62-85 (98)
44 2fc7_A ZZZ3 protein; structure 87.8 0.18 6E-06 43.0 1.5 33 1-33 22-59 (82)
45 1y9q_A Transcriptional regulat 87.6 0.21 7.3E-06 46.7 2.1 43 503-546 139-181 (192)
46 2e5r_A Dystrobrevin alpha; ZZ 87.6 0.18 6.2E-06 40.8 1.4 33 1-33 12-46 (63)
47 3cew_A Uncharacterized cupin p 87.6 0.31 1.1E-05 42.3 3.0 30 504-533 62-91 (125)
48 1lr5_A Auxin binding protein 1 87.5 0.24 8.2E-06 45.3 2.3 25 508-532 88-112 (163)
49 2oa2_A BH2720 protein; 1017534 87.2 0.37 1.3E-05 43.5 3.4 25 509-533 89-113 (148)
50 3l2h_A Putative sugar phosphat 86.7 0.39 1.3E-05 43.7 3.3 58 482-544 65-123 (162)
51 3jzv_A Uncharacterized protein 86.6 0.31 1.1E-05 45.8 2.6 42 504-545 87-128 (166)
52 1vj2_A Novel manganese-contain 85.6 0.37 1.3E-05 42.3 2.4 46 482-533 66-111 (126)
53 1tot_A CREB-binding protein; z 85.3 0.19 6.4E-06 39.3 0.3 30 2-32 8-38 (52)
54 4axo_A EUTQ, ethanolamine util 85.3 0.39 1.3E-05 45.1 2.6 58 482-546 81-138 (151)
55 1x82_A Glucose-6-phosphate iso 85.3 0.48 1.7E-05 45.1 3.3 40 506-545 117-156 (190)
56 4i4a_A Similar to unknown prot 85.0 0.62 2.1E-05 40.3 3.6 56 503-562 67-124 (128)
57 2o8q_A Hypothetical protein; c 84.9 0.43 1.5E-05 41.8 2.5 60 481-546 60-120 (134)
58 4h7l_A Uncharacterized protein 84.9 0.22 7.5E-06 47.3 0.6 45 481-530 62-108 (157)
59 3lwc_A Uncharacterized protein 83.8 0.49 1.7E-05 41.9 2.4 55 484-545 58-113 (119)
60 3rns_A Cupin 2 conserved barre 83.1 0.46 1.6E-05 46.2 2.1 48 481-534 170-218 (227)
61 3bcw_A Uncharacterized protein 83.0 0.42 1.5E-05 42.9 1.6 30 510-539 89-118 (123)
62 3i7d_A Sugar phosphate isomera 82.9 0.59 2E-05 43.3 2.6 59 481-544 61-121 (163)
63 2bnm_A Epoxidase; oxidoreducta 82.7 0.6 2.1E-05 43.6 2.7 45 481-531 137-185 (198)
64 1fi2_A Oxalate oxidase, germin 82.6 0.99 3.4E-05 43.1 4.2 39 508-546 119-157 (201)
65 1y3t_A Hypothetical protein YX 82.3 0.62 2.1E-05 46.9 2.8 67 481-553 235-301 (337)
66 2f4p_A Hypothetical protein TM 81.0 0.96 3.3E-05 41.0 3.3 35 510-544 89-123 (147)
67 1qwr_A Mannose-6-phosphate iso 79.3 0.65 2.2E-05 48.2 1.7 18 512-529 162-179 (319)
68 1o4t_A Putative oxalate decarb 78.7 0.86 3E-05 40.4 2.1 31 503-533 91-121 (133)
69 1zx5_A Mannosephosphate isomer 78.5 0.71 2.4E-05 47.6 1.7 19 511-529 161-179 (300)
70 3rns_A Cupin 2 conserved barre 77.6 0.81 2.8E-05 44.5 1.7 53 481-539 54-106 (227)
71 1rc6_A Hypothetical protein YL 76.9 0.77 2.6E-05 45.4 1.4 47 482-533 197-243 (261)
72 3h7j_A Bacilysin biosynthesis 76.6 1.2 4E-05 43.7 2.6 47 481-533 51-98 (243)
73 4diq_A Lysine-specific demethy 75.9 1.8 6.2E-05 47.7 4.1 42 503-544 223-266 (489)
74 1y3t_A Hypothetical protein YX 75.9 1.2 4.2E-05 44.7 2.6 49 503-552 80-128 (337)
75 2pyt_A Ethanolamine utilizatio 75.8 1.3 4.6E-05 40.0 2.6 50 485-539 75-124 (133)
76 2xdv_A MYC-induced nuclear ant 75.4 1.8 6.2E-05 47.0 3.9 31 502-532 193-223 (442)
77 1juh_A Quercetin 2,3-dioxygena 74.9 1.1 3.9E-05 46.5 2.1 69 481-555 67-140 (350)
78 1sef_A Conserved hypothetical 74.7 1.1 3.9E-05 44.7 1.9 47 481-533 200-246 (274)
79 2wfp_A Mannose-6-phosphate iso 73.8 1.1 3.8E-05 47.9 1.7 16 513-528 245-260 (394)
80 4e2q_A Ureidoglycine aminohydr 73.4 1.2 4E-05 45.5 1.7 30 503-532 220-249 (266)
81 2vpv_A Protein MIF2, MIF2P; nu 73.4 1.8 6.3E-05 41.1 2.9 30 505-534 125-154 (166)
82 2vqa_A SLL1358 protein, MNCA; 72.5 2.5 8.5E-05 43.3 3.9 53 509-562 279-331 (361)
83 2d40_A Z3393, putative gentisa 72.3 2 6.8E-05 45.0 3.2 40 505-544 136-175 (354)
84 1pmi_A PMI, phosphomannose iso 71.8 1.3 4.5E-05 48.1 1.7 16 512-527 270-285 (440)
85 1sq4_A GLXB, glyoxylate-induce 68.9 1.8 6.1E-05 43.7 1.8 43 486-533 91-133 (278)
86 3nw4_A Gentisate 1,2-dioxygena 68.4 2.4 8.2E-05 45.1 2.8 29 505-533 139-167 (368)
87 3bu7_A Gentisate 1,2-dioxygena 67.7 2.4 8.3E-05 45.4 2.6 29 504-532 328-356 (394)
88 1sfn_A Conserved hypothetical 67.5 2 6.7E-05 42.4 1.8 32 502-533 198-229 (246)
89 1dgw_A Canavalin; duplicated s 66.7 3.5 0.00012 38.7 3.3 27 507-533 82-108 (178)
90 1j58_A YVRK protein; cupin, de 66.6 3.8 0.00013 42.5 3.8 38 507-544 300-337 (385)
91 1zrr_A E-2/E-2' protein; nicke 65.4 4.7 0.00016 38.6 3.9 25 509-533 123-147 (179)
92 2d5f_A Glycinin A3B4 subunit; 63.4 3.5 0.00012 45.4 2.9 33 513-545 118-150 (493)
93 2vqa_A SLL1358 protein, MNCA; 63.1 2.4 8.3E-05 43.4 1.5 25 508-532 96-120 (361)
94 3es1_A Cupin 2, conserved barr 63.0 3.6 0.00012 39.3 2.5 35 509-544 119-153 (172)
95 1sfn_A Conserved hypothetical 62.6 2.6 8.9E-05 41.5 1.6 31 504-534 82-112 (246)
96 2e9q_A 11S globulin subunit be 60.9 3.6 0.00012 44.9 2.5 34 513-546 132-165 (459)
97 1vr3_A Acireductone dioxygenas 59.6 6.6 0.00023 38.2 3.8 37 509-545 128-164 (191)
98 4b29_A Dimethylsulfoniopropion 58.7 3.1 0.00011 41.4 1.4 46 481-532 149-195 (217)
99 4e2q_A Ureidoglycine aminohydr 57.8 3.4 0.00011 42.1 1.4 25 509-533 110-134 (266)
100 1rc6_A Hypothetical protein YL 57.7 5.2 0.00018 39.4 2.8 29 505-533 96-124 (261)
101 1sef_A Conserved hypothetical 57.3 4.2 0.00014 40.5 2.1 30 504-533 98-127 (274)
102 1sq4_A GLXB, glyoxylate-induce 57.1 3.2 0.00011 41.9 1.1 32 502-533 224-255 (278)
103 3c3v_A Arachin ARAH3 isoform; 56.6 4.9 0.00017 44.5 2.6 34 513-546 131-164 (510)
104 2d40_A Z3393, putative gentisa 54.8 6 0.0002 41.3 2.8 27 505-531 303-329 (354)
105 1fxz_A Glycinin G1; proglycini 54.5 5.7 0.00019 43.5 2.7 29 511-539 116-144 (476)
106 3bu7_A Gentisate 1,2-dioxygena 53.8 6 0.00021 42.4 2.6 29 504-532 158-187 (394)
107 3cjx_A Protein of unknown func 52.1 7.3 0.00025 36.7 2.6 33 513-545 85-126 (165)
108 2arc_A ARAC, arabinose operon 52.0 9 0.00031 33.6 3.1 30 503-532 51-80 (164)
109 2cav_A Protein (canavalin); vi 51.2 6.5 0.00022 42.7 2.4 27 508-534 128-155 (445)
110 1fxz_A Glycinin G1; proglycini 46.4 9.9 0.00034 41.6 2.9 81 480-562 354-438 (476)
111 2y0o_A Probable D-lyxose ketol 46.3 7.9 0.00027 37.2 1.9 38 507-546 117-155 (175)
112 1uij_A Beta subunit of beta co 44.4 11 0.00036 40.5 2.8 46 482-532 66-115 (416)
113 2ea7_A 7S globulin-1; beta bar 41.8 13 0.00043 40.2 2.8 28 507-534 102-130 (434)
114 3c3v_A Arachin ARAH3 isoform; 40.5 13 0.00046 41.1 2.8 102 441-544 351-453 (510)
115 1v5n_A PDI-like hypothetical p 40.0 11 0.00038 32.1 1.6 29 2-30 49-77 (89)
116 1vq8_T 50S ribosomal protein L 37.7 7.9 0.00027 35.2 0.4 40 483-524 16-55 (120)
117 1j58_A YVRK protein; cupin, de 37.2 16 0.00056 37.7 2.7 25 509-533 123-147 (385)
118 3j21_U 50S ribosomal protein L 35.3 9.7 0.00033 34.7 0.6 39 483-523 19-57 (121)
119 2o1q_A Putative acetyl/propion 35.2 14 0.00048 33.5 1.7 52 481-538 61-115 (145)
120 2d5f_A Glycinin A3B4 subunit; 32.5 9.6 0.00033 41.9 0.1 119 441-563 346-465 (493)
121 3kgl_A Cruciferin; 11S SEED gl 32.3 20 0.00068 39.3 2.5 34 513-546 150-183 (466)
122 4esj_A Type-2 restriction enzy 32.2 17 0.00057 36.9 1.7 21 1-23 35-65 (257)
123 3qac_A 11S globulin SEED stora 31.2 24 0.00083 38.6 3.0 34 513-546 135-168 (465)
124 3nw4_A Gentisate 1,2-dioxygena 30.4 26 0.00089 37.2 3.0 29 507-535 316-344 (368)
125 2ct7_A Ring finger protein 31; 26.4 20 0.0007 29.9 1.0 29 2-30 27-59 (86)
126 3ebr_A Uncharacterized RMLC-li 24.9 31 0.0011 32.1 2.1 34 511-544 81-123 (159)
127 1uij_A Beta subunit of beta co 24.6 38 0.0013 36.2 3.0 34 511-545 310-343 (416)
128 3ksc_A LEGA class, prolegumin; 22.7 39 0.0013 37.3 2.7 32 513-544 115-149 (496)
129 3eqe_A Putative cystein deoxyg 22.2 56 0.0019 30.9 3.3 36 510-545 119-154 (171)
No 1
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.5e-134 Score=1061.56 Aligned_cols=353 Identities=28% Similarity=0.475 Sum_probs=273.4
Q ss_pred ccccHHHHHHHhhcCCCEEEecccccCCCCCCChhhhhhhhhhhcccccccccCceEEEecCCCCeeecccccccccccC
Q 006870 165 RSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSE 244 (628)
Q Consensus 165 ~~~~l~hFQ~hW~kGePVIVr~Vl~~~s~lsW~P~~mwr~~~e~~~~~~~~~~~~v~aidCld~~ev~i~i~qFf~Gy~~ 244 (628)
..+|++|||+||++|||||||||++++++++|+|++|||+|++ ..+++|||++|++++|++++||+||++
T Consensus 20 ~~~n~~~Fq~hW~~GePViVs~V~~~~~~~~W~Pe~~~~~~gd----------~~~~lidC~~~~~~~i~v~~Ff~Gf~~ 89 (392)
T 2ypd_A 20 NSSNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGD----------HQADLLNCKDSIISNANVKEFWDGFEE 89 (392)
T ss_dssp CTTHHHHHHHHHTTTCCEEECCHHHHSCGGGGSHHHHHHHHTT----------SCCCCEETTTCCBCSCCHHHHHHTSSB
T ss_pred CcccHHHHHHHHhCCCcEEEechhhhCcCCccCHHHHHHHhcC----------ceeeeeeCCCCccccCcHHHHhhhccc
Confidence 3479999999999999999999999999999999999998753 236789999999999999999999999
Q ss_pred Cccc---CCCCceeeeeCCCCCchhhHHhhhhcchHHHhcCCCccccCCCCccchhcccCCCCCCCCCCCCccccccccc
Q 006870 245 GRVR---EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTY 321 (628)
Q Consensus 245 gr~~---~~g~p~mLKLKDWPps~~Fee~lP~h~~efi~~LP~~EYt~pr~G~LNLAs~LP~~~lkPDLGPK~YIAYG~~ 321 (628)
++.+ ++|||+|||||||||+++|+|+||+||+|||++||||||||| +|+|||||+||+++++||||||||||||++
T Consensus 90 ~~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p-~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~ 168 (392)
T 2ypd_A 90 VSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVV 168 (392)
T ss_dssp GGGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHST-TCTTCCTTTSCGGGCC---CCEEEEECCST
T ss_pred cccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCC-CccchHHHhCCCCCCCCCCCcchhhhcCcc
Confidence 8764 699999999999999999999999999999999999999998 599999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeccccceeeeecccccCCCchhHHhhhccccccccccCCCCCccCCCCCCCCCCCCCCCCCccccc
Q 006870 322 EELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVE 401 (628)
Q Consensus 322 eelg~gdSvTkLH~DmSDAVNIL~h~~ev~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 401 (628)
+++|+|+|||||||||||||||||||++++....... .+.+ +.++++++++. .
T Consensus 169 ~~~~~~~gvT~LH~DmsDaVNiL~h~~~~~~~~~~~~-~~~l--------------~~~~~~~~d~~----------~-- 221 (392)
T 2ypd_A 169 AAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSK-AGIL--------------KKFEEEDLDDI----------L-- 221 (392)
T ss_dssp TTTCTTCCSEEEEECSSEEEEEEEEEECCBCTTCCCH-HHHH--------------HHHHTSCCCHH----------H--
T ss_pred hhcccCCCcceeeeehhhhhhhhheecccCccccchh-hhhh--------------hhhhhccccHH----------H--
Confidence 9999999999999999999999999998765443211 0101 01111211110 0
Q ss_pred ccccchhhhhhhcCcccccccccccccccccCCCCCCCCCCCceEEEEecCCChHHHHHHHHHHHHhhCCCCCCCCCccc
Q 006870 402 KSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVT 481 (628)
Q Consensus 402 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~GAlWdIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~ 481 (628)
.+ +. .+.++.+||+||||||||++|||+||++|++||+.+. ..+.
T Consensus 222 ------~~--------------------r~-----~~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~~~~~----~~~~ 266 (392)
T 2ypd_A 222 ------RK--------------------RL-----KDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEV----LPEH 266 (392)
T ss_dssp ------HH--------------------HH-----TCTTCCEEEEEEEECGGGHHHHHHHHHHHHHHHC----------C
T ss_pred ------hh--------------------hc-----cCCCCCCCceeeeeCHhhHHHHHHHHHHHHHhhCCCc----cCCC
Confidence 00 01 1345689999999999999999999999999997653 3478
Q ss_pred CCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHHHHhcCC
Q 006870 482 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLP 561 (628)
Q Consensus 482 hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp 561 (628)
||||||+||||++||++|+|||||+||||+|++|||||||||||||||||+||||||+||||||||++|++||+|||+||
T Consensus 267 dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~~~c~~lt~E~R~l~ 346 (392)
T 2ypd_A 267 DPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLK 346 (392)
T ss_dssp CHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGHHHHHHHHHHC----
T ss_pred CcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CcchhhhhhhhhhhHHHHHHHHHHHHHHHh
Q 006870 562 NDHEAKLQVLEVGKISLYAASSAIKEVQKL 591 (628)
Q Consensus 562 ~~H~~K~d~Levkkm~lya~~~avke~~~l 591 (628)
+|++|+||||||+|++||++.||++|++.
T Consensus 347 -~~~~~edkLqvk~m~~~av~~av~~l~~~ 375 (392)
T 2ypd_A 347 -EEINYDDKLQVKNILYHAVKEMVRALKIH 375 (392)
T ss_dssp ------------------------------
T ss_pred -hhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 69999999999999999999999999973
No 2
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=99.33 E-value=1.2e-12 Score=126.05 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=33.2
Q ss_pred CccceEEEeecCceEEeCCCCcccccccCCcceeecc
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLD 540 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlD 540 (628)
++.++.++|.+||++|||+|..|||+||..||.|..-
T Consensus 197 ~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w 233 (235)
T 4gjz_A 197 KAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFW 233 (235)
T ss_dssp GCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEE
T ss_pred CCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEe
Confidence 4578999999999999999999999999999887643
No 3
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=99.25 E-value=1.3e-10 Score=122.12 Aligned_cols=243 Identities=16% Similarity=0.200 Sum_probs=144.1
Q ss_pred cHHHHHHHhh-cCCCEEEecccccCCC-CCCChhhhhhhhhhhcccccccccCceEEEecCCCCeeecccccccccccCC
Q 006870 168 GIGNFRKHWV-KGEPVIVKQVCDSSSM-SIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSEG 245 (628)
Q Consensus 168 ~l~hFQ~hW~-kGePVIVr~Vl~~~s~-lsW~P~~mwr~~~e~~~~~~~~~~~~v~aidCld~~ev~i~i~qFf~Gy~~g 245 (628)
..+.|.+++. .+.|||++|+.+.-.. ..|++.++-+.+++ ..|.+-.-.++..+.+++++|.+-+...
T Consensus 56 S~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~yL~~~~G~----------~~V~v~~~~~~~~~~m~~~~fl~~~~~~ 125 (336)
T 3k2o_A 56 SVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKYRN----------QKFKCGEDNDGYSVKMKMKYYIEYMEST 125 (336)
T ss_dssp CHHHHHHHTTTTTCCEEEESTTTTCTHHHHCSHHHHHHHSTT----------CEEEEEECTTSCEEEEEHHHHHHHHHHC
T ss_pred CHHHHHHHhhccCCCEEEeCCcCCChhHhhhhHHHHHHHhCC----------ceEEEEecCCCceeeecHHHHHHHHHhc
Confidence 5677887776 6999999998664332 25888887654432 2233322234445678899998744332
Q ss_pred cccCCCCceeeeeCCCCCchhhHHhhhhcchHHHhcCCCccccCCCCccchhcccCCCCCCCCCCCCccccccccccccc
Q 006870 246 RVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELD 325 (628)
Q Consensus 246 r~~~~g~p~mLKLKDWPps~~Fee~lP~h~~efi~~LP~~EYt~pr~G~LNLAs~LP~~~lkPDLGPK~YIAYG~~eelg 325 (628)
..+.| |=|.||. |.+. ..++++.....+|+|-- ...+|++ +. ..+|| -+++=. |
T Consensus 126 ---~~~~~--lYL~d~~----~~e~--~~~p~L~~dy~~P~~f~--~d~~~~~---~~-~~~p~---~~~~~~------G 179 (336)
T 3k2o_A 126 ---RDDSP--LYIFDSS----YGEH--PKRRKLLEDYKVPKFFT--DDLFQYA---GE-KRRPP---YRWFVM------G 179 (336)
T ss_dssp ---CCSSC--CCEEESC----GGGS--TTGGGGGGGCCCCGGGC--CCGGGGG---CT-TTSCC---CEEEEE------E
T ss_pred ---CCCCC--ceEeccc----cccc--ccchhHHHhcCCCcccc--cchhhhc---cc-ccCCC---ceEEEE------C
Confidence 12223 4455643 2211 12345666677888872 4566643 21 12332 233322 3
Q ss_pred CCCCcceeeeeccccceeeeecccccCCCchhHHhhhccccccccccCCCCCccCCCCCCCCCCCCCCCCCccccccccc
Q 006870 326 RGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSAT 405 (628)
Q Consensus 326 ~gdSvTkLH~DmSDAVNIL~h~~ev~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 405 (628)
.+.|.|.||.|....-|+++.+.
T Consensus 180 ~~gs~t~~H~D~~~~~~~~~~v~--------------------------------------------------------- 202 (336)
T 3k2o_A 180 PPRSGTGIHIDPLGTSAWNALVQ--------------------------------------------------------- 202 (336)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEE---------------------------------------------------------
T ss_pred CCCccCCcccCCCccceeeEEEe---------------------------------------------------------
Confidence 34678999999988544443321
Q ss_pred chhhhhhhcCcccccccccccccccccCCCCCCCCCCCceEEEEecCCChHHHHHHHHHHHHhhC-CCCCCCCCcccCCC
Q 006870 406 DEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFG-RPDGVTNDFVTHPL 484 (628)
Q Consensus 406 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~GAlWdIFrreDv~KLreyL~kh~~Ef~-~~~~~~~~~v~hPI 484 (628)
|.-.|-+|.+.+.+.|- ++....+ .... . .++
T Consensus 203 -------------------------------------G~K~~~L~pP~~~~~ly----~~~~~~~~~~~~---~-~~~-- 235 (336)
T 3k2o_A 203 -------------------------------------GHKRWCLFPTSTPRELI----KVTRDEGGNQQD---E-AIT-- 235 (336)
T ss_dssp -------------------------------------SCEEEEEECTTSCHHHH----CCCHHHHGGGTT---C-HHH--
T ss_pred -------------------------------------eeEEEEEeCCCcchhcc----cCcccccCCCcc---c-hhh--
Confidence 01167888877764432 1111110 0000 0 011
Q ss_pred cCcceeeCHHHHHHHH-HHh--CccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHHH
Q 006870 485 YGEVVYLNGDHKRKLK-EEF--GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEE 556 (628)
Q Consensus 485 HDQ~fYLd~~hk~kLk-eEy--GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteE 556 (628)
|+++.. -+++ ++| +..++.++|.+||++|||+|..|||+|+..||.|+..|+++.|+...+++|-+
T Consensus 236 ----w~~~~~--P~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~~~~~~ 304 (336)
T 3k2o_A 236 ----WFNVIY--PRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVR 304 (336)
T ss_dssp ----HHHHTG--GGGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHHHHHHH
T ss_pred ----hhhhhC--cchhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHHHHHHh
Confidence 111000 0011 111 46789999999999999999999999999999999999999999999999953
No 4
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=99.19 E-value=5.2e-10 Score=121.73 Aligned_cols=83 Identities=14% Similarity=0.113 Sum_probs=65.8
Q ss_pred CccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHHHHhcCCCcchhhhhhhhhhhHHHHHHHH
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASS 583 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~H~~K~d~Levkkm~lya~~~ 583 (628)
-.+++.++|..||++|||+|.-|||.||..||-|+..|++.-|+...++.++==+++.. ..|-.--.-..|++|++..
T Consensus 262 ~~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v--~~~~~~p~f~~~~w~~~~~ 339 (451)
T 2yu1_A 262 VSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRV--PNKFRYPFYYEMCWYVLER 339 (451)
T ss_dssp SSCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTC--CTTSSCTTHHHHHHHHHHH
T ss_pred cccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCC--CccccCccHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999998872122221 1244444456899999766
Q ss_pred HHHHH
Q 006870 584 AIKEV 588 (628)
Q Consensus 584 avke~ 588 (628)
-++.+
T Consensus 340 ~~~~~ 344 (451)
T 2yu1_A 340 YVYCI 344 (451)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 5
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.15 E-value=4.6e-10 Score=123.23 Aligned_cols=87 Identities=18% Similarity=0.263 Sum_probs=73.6
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHHHHhcCCCcchhhhhhhhhhhHHHHHHHHH
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSA 584 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~H~~K~d~Levkkm~lya~~~a 584 (628)
.+++.++|..||++|||+|..|||.||..||-|..+|++..|+...++..+==+.|.. ..|-+--.-.+|++|.+..-
T Consensus 333 ~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~--~~~~~~p~f~~~~w~~~~~~ 410 (488)
T 3kv5_D 333 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKT--PDLFKFPFFEAICWFVAKNL 410 (488)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTC--CTTSSCTTHHHHHHHHHHHH
T ss_pred cceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCC--cccccCccHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999998772233321 34566667778899999998
Q ss_pred HHHHHHhcc
Q 006870 585 IKEVQKLVL 593 (628)
Q Consensus 585 vke~~~l~~ 593 (628)
++.++.+.-
T Consensus 411 l~~~~~~~~ 419 (488)
T 3kv5_D 411 LETLKELRE 419 (488)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 888887764
No 6
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=99.12 E-value=8.2e-10 Score=117.48 Aligned_cols=89 Identities=17% Similarity=0.227 Sum_probs=73.4
Q ss_pred CccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHH-HHhcCCCcchhhhhhhhhhhHHHHHHH
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVGKISLYAAS 582 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte-EfR~Lp~~H~~K~d~Levkkm~lya~~ 582 (628)
..+++.++|..||++|||+|+.|||.||..||-|+.+|++..|+...++..+ |-|.=. ..|-.-=.-.+|+||++.
T Consensus 213 ~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~---~~~f~fp~F~~~~w~~~~ 289 (371)
T 3k3o_A 213 VDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLST---ADLFRFPNFETICWYVGK 289 (371)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC-------CCCTTHHHHHHHHHH
T ss_pred cCceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhcCC---CcccccccHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999888 544311 234444456789999999
Q ss_pred HHHHHHHHhccCC
Q 006870 583 SAIKEVQKLVLDP 595 (628)
Q Consensus 583 ~avke~~~l~~~p 595 (628)
..++.++.+.-+-
T Consensus 290 ~~~~~~~~~~~~~ 302 (371)
T 3k3o_A 290 HILDIFRGLRENR 302 (371)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC
Confidence 9999999876543
No 7
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.11 E-value=9.2e-10 Score=119.65 Aligned_cols=88 Identities=17% Similarity=0.242 Sum_probs=75.6
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHH-HHhcCCCcchhhhhhhhhhhHHHHHHHH
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVGKISLYAASS 583 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte-EfR~Lp~~H~~K~d~Levkkm~lya~~~ 583 (628)
.+++.++|..||++|||+|..|||.||..||-|+.+|++..|+..-++..+ |-|.-. ..|-.-=.-.+|+||++..
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~---~~~~~~p~f~~~~w~~~~~ 374 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLST---ADLFRFPNFETICWYVGKH 374 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTC---CGGGSCTTHHHHHHHHHHH
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCC---CccccccCHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999988 544332 2344555667899999999
Q ss_pred HHHHHHHhccCC
Q 006870 584 AIKEVQKLVLDP 595 (628)
Q Consensus 584 avke~~~l~~~p 595 (628)
.++.++.+.-+.
T Consensus 375 ~~~~~~~~~~~~ 386 (447)
T 3kv4_A 375 ILDIFRGLRENR 386 (447)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC
Confidence 999999886644
No 8
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=99.08 E-value=2.2e-09 Score=115.05 Aligned_cols=86 Identities=20% Similarity=0.276 Sum_probs=73.5
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHH-HHhcCCCcchhhhhhhhhhhHHHHHHHH
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVGKISLYAASS 583 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte-EfR~Lp~~H~~K~d~Levkkm~lya~~~ 583 (628)
.+++.++|..||++|||+|..|||.|+..||-|..+|+++.|+...++..+ |- .|. -..|-+--.-.+|.+|++..
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~-~~k--~~~~~~fp~F~~~~w~~a~~ 318 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEK-RLK--TPDLFKFPFFEAICWFVAKN 318 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHH-HHT--CGGGGGSTTHHHHHHHHHHH
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHH-hcC--CCccCcCccHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999999988876 43 332 13466666778899999999
Q ss_pred HHHHHHHhcc
Q 006870 584 AIKEVQKLVL 593 (628)
Q Consensus 584 avke~~~l~~ 593 (628)
-++.++++.-
T Consensus 319 ~l~~~~~~~~ 328 (397)
T 3kv9_A 319 LLETLKELRE 328 (397)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 8888888765
No 9
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=99.06 E-value=2.4e-09 Score=114.54 Aligned_cols=87 Identities=17% Similarity=0.161 Sum_probs=73.0
Q ss_pred CccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHH-HHhcCCCcchhhhhhhhhhhHHHHHHH
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVGKISLYAAS 582 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte-EfR~Lp~~H~~K~d~Levkkm~lya~~ 582 (628)
..+++.++|..||++|||+|+.|||.|+..||-|..+|++..|+..-++..+ |-|.=. ..|-.-=.-.+|.+|++.
T Consensus 240 ~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~~---~~~f~fp~F~~~~wy~~~ 316 (392)
T 3pua_A 240 VDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKL---GSLTQFPNFETACWYMGK 316 (392)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHTC---CCSSCCTTHHHHHHHHHH
T ss_pred ccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhCC---CccCcCCChHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999988 644222 124444456788999999
Q ss_pred HHHHHHHHhcc
Q 006870 583 SAIKEVQKLVL 593 (628)
Q Consensus 583 ~avke~~~l~~ 593 (628)
..+++++.+.-
T Consensus 317 ~~l~~~~~~~~ 327 (392)
T 3pua_A 317 HLLEAFKGSHK 327 (392)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999887653
No 10
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=99.00 E-value=4.8e-10 Score=117.10 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=39.5
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
+.++.+++.+||++|||+|..|||+|+..||.|..-|.++..
T Consensus 237 ~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~~ 278 (338)
T 3al5_A 237 ARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLPS 278 (338)
T ss_dssp CCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSCG
T ss_pred CCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCcc
Confidence 579999999999999999999999999999999999998774
No 11
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=98.94 E-value=4.1e-10 Score=118.27 Aligned_cols=40 Identities=15% Similarity=0.334 Sum_probs=36.5
Q ss_pred CccceEEEeecCceEEeCCCCcccccccC-CcceeeccccC
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGLDFLF 543 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVS 543 (628)
.+.++.+++.+||++|||+|..|||+||. .++.|++.|..
T Consensus 257 ~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 257 NVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp GCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred cCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 36799999999999999999999999998 58899999875
No 12
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.49 E-value=2e-06 Score=95.02 Aligned_cols=51 Identities=20% Similarity=0.231 Sum_probs=47.7
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHH
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE 555 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte 555 (628)
.....++|..||++|||+|+.|+|.|+..||-|..+|++..||..-+++++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~ 413 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYH 413 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHH
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHH
Confidence 345589999999999999999999999999999999999999999999877
No 13
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=97.76 E-value=3.5e-05 Score=80.99 Aligned_cols=85 Identities=14% Similarity=0.129 Sum_probs=70.6
Q ss_pred ceEEEEecCCChHHHHHHHHHHHHhhCCCCCCCCCcccCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCC
Q 006870 444 GAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 523 (628)
Q Consensus 444 GAlWdIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAG 523 (628)
-.+|=.-..+.+.|++++++++. .+ ++.+.+++..+- |+ +.||.-+.|+|++||.|+|++|
T Consensus 234 ~~~Wy~VP~e~~~~~e~l~~k~~--------------~d-~~~~~~~~~p~~---L~-~~gIPvyr~~QkpGd~Vi~~Pg 294 (332)
T 2xxz_A 234 DCEWFAVHEHYWETISAFCDRHG--------------VD-YLTGSWWPILDD---LY-ASNIPVYRFVQRPGDLVWINAG 294 (332)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTT--------------CC-TTTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEECTT
T ss_pred ceEEEEECHHHHHHHHHHHHhcC--------------Cc-hhhceecCCHHH---HH-hCCCCeEEEEECCCCEEEECCC
Confidence 34999999999999999998632 12 234567777543 33 3599999999999999999999
Q ss_pred CcccccccCCcceeeccccCCcCH
Q 006870 524 CPFQVRNLQSTVQLGLDFLFPESV 547 (628)
Q Consensus 524 CPHQVRNLkSCIKVAlDFVSPEnV 547 (628)
|.|||.|.--|+++|..|..|...
T Consensus 295 ayH~v~n~G~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 295 TVHWVQATGWCNNIAWNVGPLTAY 318 (332)
T ss_dssp CEEEEEESSSEEEEEEEEESCTTG
T ss_pred ceEEEEecceeeEEEEEeCCCcHH
Confidence 999999999999999999999765
No 14
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.66 E-value=9.9e-05 Score=81.86 Aligned_cols=88 Identities=17% Similarity=0.144 Sum_probs=73.1
Q ss_pred ceEEEEecCCChHHHHHHHHHHHHhhCCCCCCCCCcccCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCC
Q 006870 444 GAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 523 (628)
Q Consensus 444 GAlWdIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAG 523 (628)
-.+|=.-..++..|++++++++. .| ++..+|+++.+. |+ +.||.-+.|+|++||.|++++|
T Consensus 293 ~~~Wy~VP~e~~~k~e~l~~k~~--------------~~-~~~~~~~~~p~~---L~-~~gIPvyr~vQkpGd~Vi~~Pg 353 (531)
T 3avr_A 293 DCEWFVVPEGYWGVLNDFCEKNN--------------LN-FLMGSWWPNLED---LY-EANVPVYRFIQRPGDLVWINAG 353 (531)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTT--------------CC-TTTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEECTT
T ss_pred CeEEEEeCHHHHHHHHHHHHHcC--------------CC-hhhceeecCHHH---HH-hCCCCeEEEEECCCCEEEECCC
Confidence 35999999999999999998652 12 234567777553 33 3599999999999999999999
Q ss_pred CcccccccCCcceeeccccCCcCHHHH
Q 006870 524 CPFQVRNLQSTVQLGLDFLFPESVGEA 550 (628)
Q Consensus 524 CPHQVRNLkSCIKVAlDFVSPEnV~ec 550 (628)
|.|||.|+--|+++|..|..|.-..--
T Consensus 354 ayH~v~n~G~~~n~awN~a~~~~~q~~ 380 (531)
T 3avr_A 354 TVHWVQAIGWCNNIAWNVGPLTACQYK 380 (531)
T ss_dssp CEEEEEESSSEEEEEEEECCSSHHHHH
T ss_pred ceEEEEecceeeeeEEEeccCchHHHH
Confidence 999999999999999999999976643
No 15
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=97.33 E-value=0.00032 Score=77.15 Aligned_cols=86 Identities=14% Similarity=0.121 Sum_probs=70.5
Q ss_pred ceEEEEecCCChHHHHHHHHHHHHhhCCCCCCCCCcccCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCC
Q 006870 444 GAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 523 (628)
Q Consensus 444 GAlWdIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAG 523 (628)
--+|=.=..+...+++++++++.. + ++.+.|+.+.+. | .+.||.-+.|+|++||.|++++|
T Consensus 268 ~c~WY~VP~e~~~k~e~l~~k~~~--------------d-~l~~~~~pspe~---L-~kagIPvyr~iQkPGdfVit~Pg 328 (510)
T 4ask_A 268 DCEWFAVHEHYWETISAFCDRHGV--------------D-YLTGSWWPILDD---L-YASNIPVYRFVQRPGDLVWINAG 328 (510)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTTC--------------C-TTTSCBCCCHHH---H-HHTTCCCEEEEECTTCEEEECTT
T ss_pred ceeEEEECHHHHHHHHHHHHHhCc--------------c-hhhccccCCHHH---H-HhCCCCeEEEEECCCCEEEECCC
Confidence 349999999999999999986421 1 233667776653 3 34799999999999999999999
Q ss_pred CcccccccCCcceeeccccCCcCHH
Q 006870 524 CPFQVRNLQSTVQLGLDFLFPESVG 548 (628)
Q Consensus 524 CPHQVRNLkSCIKVAlDFVSPEnV~ 548 (628)
+.|+|+|.-=|+++|..|.-|-...
T Consensus 329 tyH~Vqs~Gf~~niaWNvap~t~~q 353 (510)
T 4ask_A 329 TVHWVQATGWCNNIAWNVGPLTAYQ 353 (510)
T ss_dssp CEEEEEESSSEEEEEEEECBSSHHH
T ss_pred ceEEEEecCeeeeeEEEecCCCHHH
Confidence 9999999999999999998775433
No 16
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=96.68 E-value=0.0021 Score=68.13 Aligned_cols=92 Identities=18% Similarity=0.103 Sum_probs=76.6
Q ss_pred EEEEecCCChHHHHHHHHHHHHh-hCCCCCCCCCcccCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCC
Q 006870 446 HWDVFRRQDVPKLIEYLREHWTD-FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 524 (628)
Q Consensus 446 lWdIFrreDv~KLreyL~kh~~E-f~~~~~~~~~~v~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGC 524 (628)
+|=.-++++..|+++++++..-+ ++. +. + =+|.+.+.+++.. |+ +.||.-.+++|++||.|++-.|+
T Consensus 211 ~WY~VP~~~~~kfE~l~k~~~p~~~~~--c~--~----fL~h~~~lisP~~---L~-~~GIpv~~~vQ~pGEfViTfP~a 278 (354)
T 3dxt_A 211 TWYVVPPEHGQRLERLARELFPGSSRG--CG--A----FLRHKVALISPTV---LK-ENGIPFNRITQEAGEFMVTFPYG 278 (354)
T ss_dssp EEEEECGGGHHHHHHHHHHHSHHHHHH--CT--T----GGGGCCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTTC
T ss_pred EEEEeCHHHHHHHHHHHHHhCchhhhh--cH--H----HHhcCcccCCHHH---HH-HCCCceEEEEeCCCcEEEECCCc
Confidence 99999999999999999987533 221 11 1 2345778888873 44 47999999999999999999999
Q ss_pred cccccccCCcceeeccccCCcCHHH
Q 006870 525 PFQVRNLQSTVQLGLDFLFPESVGE 549 (628)
Q Consensus 525 PHQVRNLkSCIKVAlDFVSPEnV~e 549 (628)
-|.|.|+--++..|..|..|.=+..
T Consensus 279 YH~gfn~Gfn~aEAvNFA~~~Wl~~ 303 (354)
T 3dxt_A 279 YHAGFNHGFNCAEAINFATPRWIDY 303 (354)
T ss_dssp EEEEEESSSEEEEEEEECCGGGHHH
T ss_pred eEEEeeccccHhHhhccCcHHHHHh
Confidence 9999999999999999999998763
No 17
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=96.27 E-value=0.0076 Score=64.27 Aligned_cols=91 Identities=15% Similarity=0.181 Sum_probs=73.1
Q ss_pred EEEEecCCChHHHHHHHHHHHH-hhCCCCCCCCCcccCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCC
Q 006870 446 HWDVFRRQDVPKLIEYLREHWT-DFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 524 (628)
Q Consensus 446 lWdIFrreDv~KLreyL~kh~~-Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGC 524 (628)
+|=.-+.+++.|++++++++.- +|.. ++ + =+|...+.+++. .|+ +.||.-.+++|++||.|++=.|+
T Consensus 254 ~WY~VP~~~~~kfE~l~k~~~p~~~~~--c~--~----fL~h~~~lisP~---~L~-~~GIpv~r~vQ~pGEfViTfP~a 321 (373)
T 3opt_A 254 QWYSIPQEDRFKFYKFMQEQFPEEAKN--CP--E----FLRHKMFLASPK---LLQ-ENGIRCNEIVHHEGEFMITYPYG 321 (373)
T ss_dssp EEEECCGGGHHHHHHHHHHSSHHHHSS--CS--S----CTTTSCEEECHH---HHH-TTTCCCEEEEECTTCEEEECTTC
T ss_pred EEEEeCHHHHHHHHHHHHHhChhhhhh--CH--H----HhhCCcccCCHH---HHH-hcCCceEEEEECCCCEEEECCCc
Confidence 9999999999999999998764 3432 11 1 234567888885 344 47999999999999999999999
Q ss_pred cccccccCCcceeeccccCCcCHH
Q 006870 525 PFQVRNLQSTVQLGLDFLFPESVG 548 (628)
Q Consensus 525 PHQVRNLkSCIKVAlDFVSPEnV~ 548 (628)
-|.|.|+--|+..|+.|..|+=+.
T Consensus 322 YH~gfn~Gfn~aEAvNFA~~~Wl~ 345 (373)
T 3opt_A 322 YHAGFNYGYNLAESVNFALEEWLP 345 (373)
T ss_dssp CEEEEESSSEEEEEEEECCC----
T ss_pred eEEEEecCccHHHHHccCcHHHHH
Confidence 999999999999999999987654
No 18
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=95.95 E-value=0.0098 Score=63.66 Aligned_cols=94 Identities=12% Similarity=0.033 Sum_probs=76.9
Q ss_pred eEEEEecCCChHHHHHHHHHHHH-hhCCCCCCCCCcccCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCC
Q 006870 445 AHWDVFRRQDVPKLIEYLREHWT-DFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 523 (628)
Q Consensus 445 AlWdIFrreDv~KLreyL~kh~~-Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAG 523 (628)
-.|=.=+++++.|+++++++..- .|.. + .+=+|...+.++.+. |+ +.||.-.+++|++||.|++=.|
T Consensus 228 K~WY~VP~~~~~kfE~l~~~~~P~~~~~--~------~~~L~h~~~~isP~~---L~-~~GIpv~r~vQ~pGEfViTfP~ 295 (381)
T 2ox0_A 228 KSWYSVPPEHGKRLERLAKGFFPGSAQS--C------EAFLRHKMTLISPLM---LK-KYGIPFDKVTQEAGEFMITFPY 295 (381)
T ss_dssp EEEEEECGGGHHHHHHHHHHHSHHHHHH--C------TTGGGGSCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTT
T ss_pred eEEEecCHHHHHHHHHHHHHhChhhhhc--c------hHHhhccccccCHHH---HH-HCCCceEEEEecCCCEEEECCC
Confidence 39999999999999999998753 3322 1 112455788888864 33 4799999999999999999999
Q ss_pred CcccccccCCcceeeccccCCcCHHHH
Q 006870 524 CPFQVRNLQSTVQLGLDFLFPESVGEA 550 (628)
Q Consensus 524 CPHQVRNLkSCIKVAlDFVSPEnV~ec 550 (628)
+-|.|.|+--++..|..|..|.=+...
T Consensus 296 aYH~gfn~GfN~aEAvNFA~~~Wl~~g 322 (381)
T 2ox0_A 296 GYHAGFNHGFNCAESTNFATRRWIEYG 322 (381)
T ss_dssp CEEEEEECSSEEEEEEEECCTTHHHHH
T ss_pred cEEEeecCcccHHHHhccCcHHHHHHh
Confidence 999999999999999999988776543
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=95.01 E-value=0.032 Score=58.40 Aligned_cols=57 Identities=12% Similarity=0.188 Sum_probs=42.6
Q ss_pred ccceEEEeecCceEEeCCCCccccccc--CCcceeeccccCCcCHHHHHHH--------HHHHhcCCCcc
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNL--QSTVQLGLDFLFPESVGEAVRL--------AEEIRCLPNDH 564 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNL--kSCIKVAlDFVSPEnV~ec~rL--------teEfR~Lp~~H 564 (628)
..++.++-.+||+.|||+|.+|||+++ ..|+.|.+- +| +..+-+.- ..+||.||.+.
T Consensus 215 ~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~-~~~dll~~~l~~~~~~~~~~r~lp~~~ 281 (342)
T 1vrb_A 215 PDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QP-AWLDLMLAALRKKLISDNRFRELAVNH 281 (342)
T ss_dssp CSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CC-BHHHHHHHHHHHHHTTSGGGGSBCCCT
T ss_pred CCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CC-cHHHHHHHHHHHHHHhCHHhhhCCCcc
Confidence 567999999999999999999999999 468888877 44 43333321 23678877643
No 20
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=92.72 E-value=0.039 Score=48.15 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=20.5
Q ss_pred EEeecCceEEeCCCCcccccccCC
Q 006870 510 FEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 510 f~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
+.=..||.|+||||+||+++|...
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 344679999999999999999864
No 21
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=92.60 E-value=0.067 Score=45.48 Aligned_cols=58 Identities=19% Similarity=0.354 Sum_probs=38.7
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
.|+ +++-+|+..-. -++.++.=++.=..||+++||+|.||+++|...|.-+.+ ++.|+
T Consensus 57 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v-~~~~~ 114 (115)
T 1yhf_A 57 SSP-GDAMVTILSGL-----AEITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLV-VVKPE 114 (115)
T ss_dssp CCS-SEEEEEEEESE-----EEEEETTEEEEEETTCEEEECTTSCEEEEESSCEEEEEE-EECSC
T ss_pred ECC-CcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCCEEEEECCCceEEEE-EEccC
Confidence 355 46667765442 123344556777899999999999999999886544333 44444
No 22
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=92.38 E-value=0.052 Score=46.26 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=38.5
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
.|| .+|-+|+-.-. -++-+..=++.=..||+++||+|.||+++|...|. .+...+|.
T Consensus 51 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~v~~p~ 107 (116)
T 2pfw_A 51 AHR-HSQVSYVVEGE-----FHVNVDGVIKVLTAGDSFFVPPHVDHGAVCPTGGI--LIDTFSPA 107 (116)
T ss_dssp CCS-SEEEEEEEEEC-----EEEEETTEEEEECTTCEEEECTTCCEEEEESSCEE--EEEEEESC
T ss_pred ECC-cceEEEEEeeE-----EEEEECCEEEEeCCCCEEEECcCCceeeEeCCCcE--EEEEECCc
Confidence 466 56667765432 12333444677789999999999999999998763 34444553
No 23
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=92.16 E-value=0.068 Score=46.55 Aligned_cols=54 Identities=19% Similarity=0.293 Sum_probs=36.7
Q ss_pred CcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 486 GEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 486 DQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
+|.+|+-.-. -++-|+.=++.=..||+|+||+|.||+++|...+. +.+-+|.|.
T Consensus 57 ~e~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~-~~~~~v~p~ 110 (114)
T 3fjs_A 57 PSTIQCLEGE-----VEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTS-LLVTVVLVD 110 (114)
T ss_dssp CEEEEEEESC-----EEEEETTEEEEECTTEEEEECTTCCEEEEESSSEE-EEEEEECC-
T ss_pred cEEEEEEECE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCcE-EEEEEEeCC
Confidence 4666655431 12445555777889999999999999999997653 333555554
No 24
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=92.16 E-value=0.089 Score=46.34 Aligned_cols=41 Identities=27% Similarity=0.138 Sum_probs=31.3
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
+..=++.=..||+|+||+|.||+++|...---+.+-+++|.
T Consensus 76 ~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 76 DQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp GGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred ECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 44556777889999999999999999876544555555554
No 25
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=91.88 E-value=0.091 Score=45.53 Aligned_cols=38 Identities=11% Similarity=0.033 Sum_probs=29.2
Q ss_pred ceEEEeecCceEEeCCCCcccccccCCcceeeccccCC
Q 006870 507 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 507 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 544 (628)
.=++.=..||+|+||+|.||+++|..+.--+.+.+++|
T Consensus 78 ~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 78 GIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp TCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred CeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 33555678999999999999999987654455555665
No 26
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=91.84 E-value=0.057 Score=45.20 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=28.2
Q ss_pred ceEEEeecCceEEeCCCCcccccccCCcceeeccccCC
Q 006870 507 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 507 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 544 (628)
.=++.=..||+++||+|.+|+++|...+. .+..++|
T Consensus 73 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~~~~p 108 (110)
T 2q30_A 73 DAVIPAPRGAVLVAPISTPHGVRAVTDMK--VLVTIAP 108 (110)
T ss_dssp GCEEEECTTEEEEEETTSCEEEEESSSEE--EEEEEES
T ss_pred CEEEEECCCCEEEeCCCCcEEEEEcCCcE--EEEEECC
Confidence 45677789999999999999999998753 3444454
No 27
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=91.58 E-value=0.095 Score=42.89 Aligned_cols=38 Identities=34% Similarity=0.328 Sum_probs=27.0
Q ss_pred ceEEEeecCceEEeCCCCcccccccCCcceeeccccCC
Q 006870 507 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 507 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 544 (628)
.=++.=..||+++||+|.+|+++|...---+.+-+++|
T Consensus 66 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p 103 (105)
T 1v70_A 66 EEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAP 103 (105)
T ss_dssp TEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEES
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCC
Confidence 34566679999999999999999986432233344444
No 28
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=91.37 E-value=0.074 Score=45.65 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=20.9
Q ss_pred EEeecCceEEeCCCCcccccccCC
Q 006870 510 FEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 510 f~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
+.-..||++|||+|.+|++.|.-+
T Consensus 61 ~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 61 AQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEecCCcEEEEcCCCcEECEECCC
Confidence 445789999999999999999864
No 29
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=91.11 E-value=0.11 Score=51.97 Aligned_cols=75 Identities=11% Similarity=0.078 Sum_probs=52.4
Q ss_pred cCCCcCcceeeCHHHHHHHHHHh--------Cccce----------EEEeecCceEEeCCCCcccccccCCc-ceeeccc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEF--------GVEPW----------SFEQHLGEAVFIPAGCPFQVRNLQST-VQLGLDF 541 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEy--------GVepW----------tf~Q~lGEAVFIPAGCPHQVRNLkSC-IKVAlDF 541 (628)
.||-.+..||+-.-. -.+ .. |-++| ++.=..||.||||+|+||..+|.-.- .++.+-+
T Consensus 60 ~H~~~~E~~yVLeG~-~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~ 136 (239)
T 2xlg_A 60 IHYFINEWFWTPEGG-IEL--FHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVW 136 (239)
T ss_dssp EESSEEEEEEETTCC-CEE--EEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEE
T ss_pred ECCCccEEEEEEEeE-EEE--EEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 566667777775442 111 12 44555 78888999999999999999998764 2332344
Q ss_pred c----------CCcCHHHHHHHHHHHh
Q 006870 542 L----------FPESVGEAVRLAEEIR 558 (628)
Q Consensus 542 V----------SPEnV~ec~rLteEfR 558 (628)
+ +|..+.++++...+..
T Consensus 137 ~~~~~~~~~~~~p~~~e~~f~~l~~~~ 163 (239)
T 2xlg_A 137 MRNEVAPDFPYHDGGMREYFQAVGPRI 163 (239)
T ss_dssp EECSSCTTCSCTTCSHHHHHHHHSCBC
T ss_pred EecccChhhccCcchHHHHHHHhhhhc
Confidence 4 8888999998887643
No 30
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=91.09 E-value=0.13 Score=44.38 Aligned_cols=58 Identities=22% Similarity=0.245 Sum_probs=39.8
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
.|| ++|.+|+-.-. =++.|..-++.=..||+|+||+|.||.++|... --+.+.+++|-
T Consensus 58 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p~ 115 (126)
T 4e2g_A 58 EHP-HEQAGVMLEGT-----LELTIGEETRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSPP 115 (126)
T ss_dssp CCS-SEEEEEEEEEC-----EEEEETTEEEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEESC
T ss_pred cCC-CceEEEEEEeE-----EEEEECCEEEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECCC
Confidence 456 46777765442 123344556777899999999999999999988 33455566664
No 31
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=90.66 E-value=0.12 Score=54.01 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=34.6
Q ss_pred EEEeecCceEEeCCCCcccccccCCcceeeccccCC-cCHHH
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP-ESVGE 549 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP-EnV~e 549 (628)
++.=+.||+||||||.||+++|.... |..+=|.+| ..++.
T Consensus 292 ~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~~~g~~g~~~ 332 (350)
T 1juh_A 292 ATELGSGDVAFIPGGVEFKYYSEAYF-SKVLFVSSGSDGLDQ 332 (350)
T ss_dssp CEEECTTCEEEECTTCCEEEEESSSS-EEEEEEEESSSSHHH
T ss_pred EEEeCCCCEEEECCCCCEEEEecCCe-EEEEEEecCccchhh
Confidence 56668899999999999999998776 888888888 77766
No 32
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=90.53 E-value=0.1 Score=44.74 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=26.1
Q ss_pred EeecCceEEeCCCCcccccccCCc--ceeeccccCCc
Q 006870 511 EQHLGEAVFIPAGCPFQVRNLQST--VQLGLDFLFPE 545 (628)
Q Consensus 511 ~Q~lGEAVFIPAGCPHQVRNLkSC--IKVAlDFVSPE 545 (628)
.=..||+++||+|.||+++|..+. .-+.+.|-+|+
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~ 105 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPK 105 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGG
T ss_pred EeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCC
Confidence 567899999999999999998764 33444444444
No 33
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=90.48 E-value=0.12 Score=43.23 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=29.3
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
|..=++.=..||+++||+|.+|+.+|..+---+.+-+++|.
T Consensus 59 ~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~~ 99 (113)
T 2gu9_A 59 VDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPP 99 (113)
T ss_dssp ETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEESC
T ss_pred ECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCC
Confidence 34446677899999999999999999865433334444453
No 34
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=90.31 E-value=0.1 Score=44.55 Aligned_cols=48 Identities=6% Similarity=0.012 Sum_probs=33.8
Q ss_pred cCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCccee
Q 006870 485 YGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQL 537 (628)
Q Consensus 485 HDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKV 537 (628)
.++-+|+-.-. -++.|..=++.=..||+++||||.||.++|...|.=+
T Consensus 58 ~~e~~~vl~G~-----~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 105 (114)
T 2ozj_A 58 GDTLYLILQGE-----AVITFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKML 105 (114)
T ss_dssp SCEEEEEEEEE-----EEEEETTEEEEECTTCEEEECTTCCBEEEEEEEEEEE
T ss_pred CCeEEEEEeCE-----EEEEECCEEEEecCCCEEEECCCCcEEEEeCCCcEEE
Confidence 35566664331 1244555677778999999999999999998665433
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=90.21 E-value=0.12 Score=48.28 Aligned_cols=59 Identities=15% Similarity=0.039 Sum_probs=40.8
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccC-CcceeeccccCCc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGLDFLFPE 545 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVSPE 545 (628)
.|+ ++|.+|+-.-. -++-|..=++.=..||+||||+|.||+++|.. +---+.+-+++|+
T Consensus 73 ~H~-~~E~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 73 RHE-HTHVVMVVRGH-----AEVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp BCS-SCEEEEEEESE-----EEEEETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred cCC-CcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 566 67777776442 12344555777789999999999999999987 4333344455665
No 36
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=90.21 E-value=0.15 Score=42.81 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=21.5
Q ss_pred EEEeecCceEEeCCCCcccccccCC
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
++.=..||+|+||+|.||+++|.-+
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEcCCCEEEeCCCCcccCEeCCC
Confidence 4555779999999999999999874
No 37
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=90.03 E-value=0.15 Score=42.07 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=22.7
Q ss_pred EEEeecCceEEeCCCCcccccccCCcc
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQSTV 535 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkSCI 535 (628)
++.=..||+++||+|.+|+++|...|.
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 95 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEECK 95 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCCE
Confidence 455578999999999999999986554
No 38
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=89.88 E-value=0.21 Score=46.50 Aligned_cols=59 Identities=20% Similarity=0.104 Sum_probs=37.7
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
.|+ +.|-+|+..-. -++-|..=++.=..||+||||+|++|+++|..+---+-+-.++|+
T Consensus 61 ~H~-~~E~~~Vl~G~-----~~v~v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~ 119 (156)
T 3kgz_A 61 RHA-HVHAVMIHRGH-----GQCLVGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAA 119 (156)
T ss_dssp BCS-SCEEEEEEEEE-----EEEEETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESS
T ss_pred eCC-CcEEEEEEeCE-----EEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCC
Confidence 355 35555554331 122344456677889999999999999999876433444555554
No 39
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=89.84 E-value=0.1 Score=45.30 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=25.9
Q ss_pred ceEEEeecCceEEeCCCCcccccccCCccee
Q 006870 507 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQL 537 (628)
Q Consensus 507 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKV 537 (628)
.-++.=..||+|+||+|.||+.+|....-|+
T Consensus 67 g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 67 GKKYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp CCEEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred CCEEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 5567788999999999999999998765443
No 40
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=89.19 E-value=0.16 Score=49.97 Aligned_cols=59 Identities=19% Similarity=0.243 Sum_probs=40.6
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
.|| +.|.+|+..-. -++.|..=++.=..||+|+||+|+||+++|...---+.+..++|-
T Consensus 163 ~H~-~~e~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 163 KHR-NEQIGICIGGG-----YDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp CCS-SEEEEEECSSC-----EEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred eCC-CcEEEEEEECE-----EEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 455 46777776542 123344446667899999999999999999966545556666664
No 41
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=89.06 E-value=0.15 Score=43.16 Aligned_cols=60 Identities=13% Similarity=0.152 Sum_probs=34.7
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccc-eEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHH
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEP-WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVG 548 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVep-Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ 548 (628)
.||-.++.+|+-.-. -++.++. =++.=..||+++||+|.||..+|...|.=+ ++.|....
T Consensus 44 ~H~~~~E~~~Vl~G~-----~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l---~i~~~~~~ 104 (107)
T 2i45_A 44 THGYSDKVLFAVEGD-----MAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLV---LIELSDPS 104 (107)
T ss_dssp CC--CCEEEEESSSC-----EEEEETTSCEEEECTTEEEEECTTCCEEEEEEEEEEEE---EEECC---
T ss_pred eCCCCCEEEEEEeCE-----EEEEECCCcEEEECCCCEEEECCCCcEeeEeCCCeEEE---EEECCCcc
Confidence 344335666664332 1122333 466778899999999999999997554322 45555443
No 42
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=88.98 E-value=0.13 Score=45.28 Aligned_cols=32 Identities=34% Similarity=0.872 Sum_probs=27.5
Q ss_pred CccCCCCC-ccccccccCCCC-CcchhhhhhHHh
Q 006870 1 MCCNICRI-PIIDYHRHCGNC-MYDLCLSCCQDL 32 (628)
Q Consensus 1 m~Cd~C~t-sI~D~HRsC~~C-sydLCL~CC~el 32 (628)
+.||.|.. +|+-+--.|..| .||||..|-..-
T Consensus 32 v~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~ 65 (98)
T 2dip_A 32 IPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSY 65 (98)
T ss_dssp CCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTT
T ss_pred CCCcCCCCCCcccCeEECCCCCCccHHHHHHccC
Confidence 46999996 899988889999 799999996643
No 43
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=87.85 E-value=0.16 Score=43.79 Aligned_cols=24 Identities=25% Similarity=0.308 Sum_probs=21.0
Q ss_pred EeecCceEEeCCCCcccccccCCc
Q 006870 511 EQHLGEAVFIPAGCPFQVRNLQST 534 (628)
Q Consensus 511 ~Q~lGEAVFIPAGCPHQVRNLkSC 534 (628)
.=..||++++|+|.+|+++|--+.
T Consensus 62 ~l~aGd~~~~p~G~~H~~~N~g~~ 85 (98)
T 2ozi_A 62 QLKTGRSYARKAGVQHDVRNESTA 85 (98)
T ss_dssp CBCTTCCEEECTTCEEEEEECSSS
T ss_pred EECCCCEEEECCCCceeCEECCCC
Confidence 456899999999999999998763
No 44
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=87.77 E-value=0.18 Score=42.99 Aligned_cols=33 Identities=39% Similarity=0.908 Sum_probs=27.9
Q ss_pred CccCCCCC-ccccccccCCCCC----cchhhhhhHHhh
Q 006870 1 MCCNICRI-PIIDYHRHCGNCM----YDLCLSCCQDLR 33 (628)
Q Consensus 1 m~Cd~C~t-sI~D~HRsC~~Cs----ydLCL~CC~elr 33 (628)
+.||.|.. +|+-+--.|..|. ||||..|-...+
T Consensus 22 ~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~ 59 (82)
T 2fc7_A 22 FKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLH 59 (82)
T ss_dssp CCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCC
T ss_pred CCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCcc
Confidence 36999995 8999888899986 999999987544
No 45
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=87.64 E-value=0.21 Score=46.70 Aligned_cols=43 Identities=9% Similarity=-0.034 Sum_probs=33.3
Q ss_pred hCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 503 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 503 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
+.|..=++.=..||+|+||+|.||+.+|..+.-- .+-++.|..
T Consensus 139 ~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~~~ 181 (192)
T 1y9q_A 139 VFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYPR 181 (192)
T ss_dssp EEETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEECCC
T ss_pred EEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEecCc
Confidence 4455667788899999999999999999865333 666777654
No 46
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.60 E-value=0.18 Score=40.80 Aligned_cols=33 Identities=24% Similarity=0.789 Sum_probs=28.1
Q ss_pred CccCCCCC-ccccccccCCCC-CcchhhhhhHHhh
Q 006870 1 MCCNICRI-PIIDYHRHCGNC-MYDLCLSCCQDLR 33 (628)
Q Consensus 1 m~Cd~C~t-sI~D~HRsC~~C-sydLCL~CC~elr 33 (628)
+.||.|.. +|+-+.-.|..| .||||..|-..-+
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~ 46 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGH 46 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCC
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCC
Confidence 46999996 599988899999 7999999988644
No 47
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=87.56 E-value=0.31 Score=42.30 Aligned_cols=30 Identities=13% Similarity=0.112 Sum_probs=25.1
Q ss_pred CccceEEEeecCceEEeCCCCcccccccCC
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
.|..-++.=..||+|+||+|.||+.+|..+
T Consensus 62 ~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~ 91 (125)
T 3cew_A 62 TIDGEKIELQAGDWLRIAPDGKRQISAASD 91 (125)
T ss_dssp EETTEEEEEETTEEEEECTTCCEEEEEBTT
T ss_pred EECCEEEEeCCCCEEEECCCCcEEEEcCCC
Confidence 345567778899999999999999999843
No 48
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=87.47 E-value=0.24 Score=45.29 Aligned_cols=25 Identities=24% Similarity=0.207 Sum_probs=23.1
Q ss_pred eEEEeecCceEEeCCCCcccccccC
Q 006870 508 WSFEQHLGEAVFIPAGCPFQVRNLQ 532 (628)
Q Consensus 508 Wtf~Q~lGEAVFIPAGCPHQVRNLk 532 (628)
-++.=..||+|+||+|.||+++|..
T Consensus 88 ~~~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 88 QEIPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEEECTTEEEEECTTCCEEEECCC
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 6778889999999999999999986
No 49
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=87.18 E-value=0.37 Score=43.46 Aligned_cols=25 Identities=36% Similarity=0.340 Sum_probs=22.0
Q ss_pred EEEeecCceEEeCCCCcccccccCC
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
++.=..||+|+||+|.||+++|..+
T Consensus 89 ~~~l~~Gd~i~ip~g~~H~~~n~~~ 113 (148)
T 2oa2_A 89 QEEVFDDYAILIPAGTWHNVRNTGN 113 (148)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSS
T ss_pred eEEECCCCEEEECCCCcEEEEECCC
Confidence 3667899999999999999999864
No 50
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=86.69 E-value=0.39 Score=43.73 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=38.2
Q ss_pred CCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCC-CcccccccCCcceeeccccCC
Q 006870 482 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG-CPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 482 hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAG-CPHQVRNLkSCIKVAlDFVSP 544 (628)
|+-.++.+|+-.-. -++-|..=++.=..||+|+||+| .+|+++|..+---+.+-+.+|
T Consensus 65 H~~~~E~~~Vl~G~-----~~~~~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p 123 (162)
T 3l2h_A 65 HHYEEEAVYVLSGK-----GTLTMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQR 123 (162)
T ss_dssp ESSCCEEEEEEESC-----EEEEETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEEC
T ss_pred CCCCCEEEEEEEEE-----EEEEECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECC
Confidence 44445666654331 12334445677889999999998 999999986654445555555
No 51
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=86.61 E-value=0.31 Score=45.79 Aligned_cols=42 Identities=19% Similarity=-0.100 Sum_probs=29.5
Q ss_pred CccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
-|..=++.=..||+|+||+|.+|+++|...---+.+-+++|+
T Consensus 87 ~v~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 87 MVGRAVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred EECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 344556777889999999999999999765333334444443
No 52
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=85.56 E-value=0.37 Score=42.26 Aligned_cols=46 Identities=15% Similarity=0.126 Sum_probs=31.1
Q ss_pred CCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCC
Q 006870 482 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 482 hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
|+ ..+-+|+..-. -++.+..=++.=..||+++||+|.||+.+|..+
T Consensus 66 H~-~~e~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~ 111 (126)
T 1vj2_A 66 HP-WEHEIFVLKGK-----LTVLKEQGEETVEEGFYIFVEPNEIHGFRNDTD 111 (126)
T ss_dssp CS-SCEEEEEEESE-----EEEECSSCEEEEETTEEEEECTTCCEEEECCSS
T ss_pred CC-CcEEEEEEEeE-----EEEEECCEEEEECCCCEEEECCCCcEEeEeCCC
Confidence 44 45556654331 123334445666789999999999999999864
No 53
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=85.31 E-value=0.19 Score=39.31 Aligned_cols=30 Identities=37% Similarity=0.998 Sum_probs=24.8
Q ss_pred ccCCCCCccccccccCCCC-CcchhhhhhHHh
Q 006870 2 CCNICRIPIIDYHRHCGNC-MYDLCLSCCQDL 32 (628)
Q Consensus 2 ~Cd~C~tsI~D~HRsC~~C-sydLCL~CC~el 32 (628)
.||+|...| -..-.|..| .||||..|-..-
T Consensus 8 ~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~ 38 (52)
T 1tot_A 8 TCNECKHHV-ETRWHCTVCEDYDLCINCYNTK 38 (52)
T ss_dssp EETTTTEEE-SSEEEESSSSSCEECHHHHHHH
T ss_pred ECCCCCCCC-cceEEcCCCCCchhHHHHHhCC
Confidence 599999996 566678888 699999997753
No 54
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=85.31 E-value=0.39 Score=45.08 Aligned_cols=58 Identities=19% Similarity=0.304 Sum_probs=40.8
Q ss_pred CCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 482 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 482 hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
|.=+++.+|+-+-. -++-|.+=++.=..||+||||+|.+|..+|...|..++. ++|-+
T Consensus 81 ~~~~eE~~yVLeG~-----~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V--~~P~~ 138 (151)
T 4axo_A 81 TLNYDEIDYVIDGT-----LDIIIDGRKVSASSGELIFIPKGSKIQFSVPDYARFIYV--TYPAD 138 (151)
T ss_dssp ECSSEEEEEEEEEE-----EEEEETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE--EECSC
T ss_pred eCCCcEEEEEEEeE-----EEEEECCEEEEEcCCCEEEECCCCEEEEEeCCCEEEEEE--ECCCC
Confidence 34467777765432 122245567888899999999999999999988877766 34543
No 55
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=85.29 E-value=0.48 Score=45.10 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=30.7
Q ss_pred cceEEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 506 EPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 506 epWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
+.+++.=..||+|+||+|.||+.+|..+--=+.+.+++|.
T Consensus 117 ~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 117 DAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred cEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 4566888999999999999999999876433445555554
No 56
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=85.04 E-value=0.62 Score=40.25 Aligned_cols=56 Identities=14% Similarity=0.127 Sum_probs=35.7
Q ss_pred hCccceEEEeecCceEEeCCCCcccccccC--CcceeeccccCCcCHHHHHHHHHHHhcCCC
Q 006870 503 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ--STVQLGLDFLFPESVGEAVRLAEEIRCLPN 562 (628)
Q Consensus 503 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLk--SCIKVAlDFVSPEnV~ec~rLteEfR~Lp~ 562 (628)
+-|..=++.=..||+++||+|.+|+++|.. .|.-+++ +++|+-+. .+..+...-|.
T Consensus 67 ~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i-~f~~~~~~---~~~~~~~~~~~ 124 (128)
T 4i4a_A 67 IRINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI-WWDKESTL---NFLTRLEQDHH 124 (128)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEE-EECHHHHH---HHHHHHHHC--
T ss_pred EEECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE-EECHHHHH---HHHHhcccccc
Confidence 345556777899999999999999999974 3333344 34554443 44555544443
No 57
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=84.93 E-value=0.43 Score=41.78 Aligned_cols=60 Identities=20% Similarity=0.250 Sum_probs=39.1
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccc-eEEEeecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEP-WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVep-Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
.|+-.++.+|+-.-. -++-+.. -++.=..||+++||+|.||..+|...-. ..+-+++|..
T Consensus 60 ~H~~~~E~~~vl~G~-----~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~-~~l~~~~p~~ 120 (134)
T 2o8q_A 60 THTVGFQLFYVLRGW-----VEFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDL-EVLEIVSPAG 120 (134)
T ss_dssp EECCSCEEEEEEESE-----EEEEETTTEEEEEETTCEEECCTTCCEEEEEECTTC-EEEEEESSTT
T ss_pred ECCCCcEEEEEEeCE-----EEEEECCcEEEEecCCCEEEECCCCcEEeEeCCCCe-EEEEEECCCc
Confidence 456556777765432 1133334 5677889999999999999999965433 3344556654
No 58
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=84.91 E-value=0.22 Score=47.27 Aligned_cols=45 Identities=16% Similarity=0.096 Sum_probs=35.0
Q ss_pred cCCCcCcceeeCH--HHHHHHHHHhCccceEEEeecCceEEeCCCCcccccc
Q 006870 481 THPLYGEVVYLNG--DHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRN 530 (628)
Q Consensus 481 ~hPIHDQ~fYLd~--~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRN 530 (628)
.|+-+++.||+-. .. -++-|..=++.=+.||+|+||+|.+|++++
T Consensus 62 ~H~~~~E~~yVLe~~G~-----g~v~idge~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 62 YHREHQEIYVVLDHAAH-----ATIELNGQSYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp BCSSCEEEEEEEEECTT-----CEEEETTEEEECCTTEEEEECTTCCEEEES
T ss_pred ECCCCcEEEEEEecCcE-----EEEEECCEEEEeCCCCEEEECCCCeEeeEC
Confidence 5777788888765 31 234555667888999999999999999985
No 59
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=83.82 E-value=0.49 Score=41.92 Aligned_cols=55 Identities=15% Similarity=0.280 Sum_probs=34.3
Q ss_pred CcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccC-CcceeeccccCCc
Q 006870 484 LYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGLDFLFPE 545 (628)
Q Consensus 484 IHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVSPE 545 (628)
-.++.+|+-.-. - +.-+..=++.=..||+|+||||++|..+|.. .+. .+--++|-
T Consensus 58 ~~~E~~~Vl~G~-~----~~~~~g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~--~l~v~~P~ 113 (119)
T 3lwc_A 58 AVDDVMIVLEGR-L----SVSTDGETVTAGPGEIVYMPKGETVTIRSHEEGAL--TAYVTYPH 113 (119)
T ss_dssp SSEEEEEEEEEE-E----EEEETTEEEEECTTCEEEECTTCEEEEEEEEEEEE--EEEEEECC
T ss_pred CCCEEEEEEeCE-E----EEEECCEEEEECCCCEEEECCCCEEEEEcCCCCeE--EEEEECCC
Confidence 446666665431 1 1122344667789999999999999999973 333 33345553
No 60
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=83.07 E-value=0.46 Score=46.21 Aligned_cols=48 Identities=21% Similarity=0.303 Sum_probs=34.7
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccc-cCCc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRN-LQST 534 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRN-LkSC 534 (628)
.|| ++|.+|+-.-. -++.|..=++.=..||+++||||+||.++| ...|
T Consensus 170 ~H~-~~e~~~Vl~G~-----~~~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~ 218 (227)
T 3rns_A 170 KAP-GDALVTVLDGE-----GKYYVDGKPFIVKKGESAVLPANIPHAVEAETENF 218 (227)
T ss_dssp CCS-SEEEEEEEEEE-----EEEEETTEEEEEETTEEEEECTTSCEEEECCSSCE
T ss_pred ECC-CcEEEEEEeEE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCE
Confidence 466 56777765442 234444556777899999999999999999 7665
No 61
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=82.97 E-value=0.42 Score=42.90 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=25.3
Q ss_pred EEeecCceEEeCCCCcccccccCCcceeec
Q 006870 510 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 539 (628)
Q Consensus 510 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 539 (628)
+.=..||+|+||+|.||..+|...+-|+-.
T Consensus 89 ~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv 118 (123)
T 3bcw_A 89 HAVKAGDAFIMPEGYTGRWEVDRHVKKIYF 118 (123)
T ss_dssp EEEETTCEEEECTTCCCEEEEEEEEEEEEE
T ss_pred EEECCCCEEEECCCCeEEEEECCceeEEEE
Confidence 445789999999999999999988777643
No 62
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=82.89 E-value=0.59 Score=43.30 Aligned_cols=59 Identities=17% Similarity=-0.001 Sum_probs=39.0
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCC--CcccccccCCcceeeccccCC
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG--CPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAG--CPHQVRNLkSCIKVAlDFVSP 544 (628)
.|+-.++-+|+..-. -++-|..=++.=..||+|+||+| .+|+++|..+---+.+-+.+|
T Consensus 61 ~H~~~eE~~~Vl~G~-----~~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p 121 (163)
T 3i7d_A 61 YHMEQDEFVMVTEGA-----LVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTR 121 (163)
T ss_dssp EESSCCEEEEEEESC-----EEEEETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEEC
T ss_pred cCCCCcEEEEEEECE-----EEEEECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECC
Confidence 344445667765432 12334455677789999999999 999999987654444444444
No 63
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=82.72 E-value=0.6 Score=43.62 Aligned_cols=45 Identities=11% Similarity=0.115 Sum_probs=32.2
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccc----eEEEeecCceEEeCCCCccccccc
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEP----WSFEQHLGEAVFIPAGCPFQVRNL 531 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVep----Wtf~Q~lGEAVFIPAGCPHQVRNL 531 (628)
.||- ++.+|+-.-. -++.|.. =++.=..||+|+||+|.||+++|.
T Consensus 137 ~h~~-~E~~~Vl~G~-----~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 137 GHAG-NEFLFVLEGE-----IHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp CCSS-CEEEEEEESC-----EEEEESCTTSCEEEEECTTCEEEECTTCCEEEEES
T ss_pred cCCC-eEEEEEEeee-----EEEEECCcCCcccEEECCCCEEEeCCCCceEEEec
Confidence 4444 5667764331 1244445 677788999999999999999998
No 64
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=82.56 E-value=0.99 Score=43.10 Aligned_cols=39 Identities=21% Similarity=0.139 Sum_probs=29.7
Q ss_pred eEEEeecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 508 WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 508 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
.++.=..||+++||+|.+|.++|...---+.+-+.++.+
T Consensus 119 ~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (201)
T 1fi2_A 119 YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQN 157 (201)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSC
T ss_pred EEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCC
Confidence 366678899999999999999998654444555566555
No 65
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=82.34 E-value=0.62 Score=46.93 Aligned_cols=67 Identities=15% Similarity=0.115 Sum_probs=46.3
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHH
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRL 553 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rL 553 (628)
.||-.++-+|+-.-. -++.|..-++.=..||.++||+|+||+.+|... --..+-+++|....+-++-
T Consensus 235 ~H~~~~e~~~vl~G~-----~~~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~~~~~~~~~ 301 (337)
T 1y3t_A 235 YHEYHTETFYCLEGQ-----MTMWTDGQEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPGLFEPFFRT 301 (337)
T ss_dssp ECSSCEEEEEEEESC-----EEEEETTEEEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESSTTTHHHHH
T ss_pred CCCCCcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCccHHHHHHH
Confidence 355444555655432 124455667888999999999999999999987 3445556788887665443
No 66
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=81.03 E-value=0.96 Score=40.99 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=25.8
Q ss_pred EEeecCceEEeCCCCcccccccCCcceeeccccCC
Q 006870 510 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 510 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 544 (628)
+.=..||+++||+|.||+.+|....--+.+-++.|
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 55679999999999999999986543333444443
No 67
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=79.32 E-value=0.65 Score=48.19 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=15.3
Q ss_pred eecCceEEeCCCCccccc
Q 006870 512 QHLGEAVFIPAGCPFQVR 529 (628)
Q Consensus 512 Q~lGEAVFIPAGCPHQVR 529 (628)
=++|||+|||||.||=.-
T Consensus 162 l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 162 IKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCTTCEEEECTTCCEEEC
T ss_pred cCCCCEEEcCCCCceEec
Confidence 358999999999999743
No 68
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=78.66 E-value=0.86 Score=40.38 Aligned_cols=31 Identities=16% Similarity=0.242 Sum_probs=25.4
Q ss_pred hCccceEEEeecCceEEeCCCCcccccccCC
Q 006870 503 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 503 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
+.|..-++.=..||+++||+|.||+.+|...
T Consensus 91 ~~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 91 FHDNGKDVPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEETTEEEEEETTEEEEECTTCEEEEECCSS
T ss_pred EEECCEEEEeCCCcEEEECCCCcEEeEECCC
Confidence 3345566777899999999999999999854
No 69
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=78.52 E-value=0.71 Score=47.57 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=15.8
Q ss_pred EeecCceEEeCCCCccccc
Q 006870 511 EQHLGEAVFIPAGCPFQVR 529 (628)
Q Consensus 511 ~Q~lGEAVFIPAGCPHQVR 529 (628)
.=++|||+|||||.||=.-
T Consensus 161 ~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 161 ETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp ECCTTCEEEECTTCCEEEE
T ss_pred ECCCCCEEEcCCCCceEcC
Confidence 3368999999999999743
No 70
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=77.64 E-value=0.81 Score=44.49 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=39.0
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeec
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 539 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 539 (628)
.|| +++.+|+-.-- =++.|..=++.=..||.++||||.||-++|+..|+=+..
T Consensus 54 ~h~-~~~~~~Vl~G~-----~~~~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 54 AML-GNRYYYCFNGN-----GEIFIENNKKTISNGDFLEITANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp SCS-SCEEEEEEESE-----EEEEESSCEEEEETTEEEEECSSCCEEEEESSSEEEEEE
T ss_pred ccC-CCEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCCEEEEECCCcEEEEE
Confidence 466 78888875431 234455556667789999999999999999998765544
No 71
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=76.93 E-value=0.77 Score=45.44 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=33.1
Q ss_pred CCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCC
Q 006870 482 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 482 hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
|+-.++.+|+-.-. -++.|..=++.=..||+||||+|+||+.+|...
T Consensus 197 H~~~~E~~~Vl~G~-----~~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 197 THVQEHGAYILSGQ-----GVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EESSCEEEEEEESE-----EEEESSSCEEEEETTCEEEECSSEEEEEEEC--
T ss_pred CCCceEEEEEEEeE-----EEEEECCEEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 44445666764331 235556667788899999999999999999854
No 72
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=76.65 E-value=1.2 Score=43.69 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=33.8
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEE-eCCCCcccccccCC
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVF-IPAGCPFQVRNLQS 533 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVF-IPAGCPHQVRNLkS 533 (628)
.|| +.|-+|+-.-- =++-|..=++.=..||+|| ||+|.||+++|..+
T Consensus 51 ~H~-~~e~~~Vl~G~-----~~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 51 QHK-EVQIGMVVSGE-----LMMTVGDVTRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp CCS-SEEEEEEEESE-----EEEEETTEEEEEETTTCEEEECTTCCEEEEECSS
T ss_pred ECC-CcEEEEEEEeE-----EEEEECCEEEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 466 67777765432 1233445566678999997 99999999999887
No 73
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=75.92 E-value=1.8 Score=47.74 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=34.3
Q ss_pred hCccceEEEeecCceEEeCCCCcccccccCC--cceeeccccCC
Q 006870 503 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS--TVQLGLDFLFP 544 (628)
Q Consensus 503 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS--CIKVAlDFVSP 544 (628)
.+-..+.++-.+||..|||.|.+|||+++.. +|.++.-+-.+
T Consensus 223 ~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~ 266 (489)
T 4diq_A 223 LGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQR 266 (489)
T ss_dssp CCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTT
T ss_pred ccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCc
Confidence 3556789999999999999999999999964 56776666544
No 74
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=75.91 E-value=1.2 Score=44.74 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=36.5
Q ss_pred hCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHH
Q 006870 503 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVR 552 (628)
Q Consensus 503 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~r 552 (628)
+.|..-++.=..||.|+||+|.||..+|...- -..+.+++|....+-++
T Consensus 80 ~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p~~~~~~~~ 128 (337)
T 1y3t_A 80 LTLDGERYLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMKGNVAHLYS 128 (337)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECSTT-EEEEEEEETTSSTHHHH
T ss_pred EEECCEEEEECCCCEEEECCCCcEEEEECCCC-eEEEEEECCCCHHHHHH
Confidence 33455667778999999999999999999763 33455677777766543
No 75
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=75.83 E-value=1.3 Score=39.97 Aligned_cols=50 Identities=20% Similarity=0.253 Sum_probs=34.3
Q ss_pred cCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeec
Q 006870 485 YGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 539 (628)
Q Consensus 485 HDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 539 (628)
.++.+|+-.-. =++-+..=++.=+.||+++||+|.||..+|...+.++.+
T Consensus 75 ~~E~~~VLeG~-----~~l~~~g~~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v 124 (133)
T 2pyt_A 75 YDEIDMVLEGE-----LHVRHEGETMIAKAGDVMFIPKGSSIEFGTPTSVRFLYV 124 (133)
T ss_dssp SEEEEEEEEEE-----EEEEETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred CCEEEEEEECE-----EEEEECCEEEEECCCcEEEECCCCEEEEEeCCCEEEEEE
Confidence 45666653321 112233556677899999999999999999877766554
No 76
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=75.39 E-value=1.8 Score=46.97 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=27.8
Q ss_pred HhCccceEEEeecCceEEeCCCCcccccccC
Q 006870 502 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 532 (628)
Q Consensus 502 EyGVepWtf~Q~lGEAVFIPAGCPHQVRNLk 532 (628)
++|...+.++=.+||+.|||+|.+|+|+.+.
T Consensus 193 ~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 193 RIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp TSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred hcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 3566678999999999999999999999986
No 77
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=74.88 E-value=1.1 Score=46.54 Aligned_cols=69 Identities=10% Similarity=0.026 Sum_probs=50.0
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccc-----eEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHH
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEP-----WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE 555 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVep-----Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLte 555 (628)
.|+-.++.||+-.-. =++-|.. -++.=..||.|+||+|.||..+|...-. ..+-.++|....+-++-..
T Consensus 67 ~H~~~~E~~~Vl~G~-----~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p~~~~~~f~~l~ 140 (350)
T 1juh_A 67 IHQKHYENFYCNKGS-----FQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVPGGFEDLFYYLG 140 (350)
T ss_dssp ECSSCEEEEEEEESE-----EEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEESSCTTHHHHHHS
T ss_pred cCCCceEEEEEEEEE-----EEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcCccHHHHHHHhc
Confidence 466667778775432 1234555 7788899999999999999999987654 6677888988766654433
No 78
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=74.71 E-value=1.1 Score=44.69 Aligned_cols=47 Identities=17% Similarity=0.246 Sum_probs=33.5
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCC
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
.|+ .++-+|+-.- +-++.|..-++.=..||+|+||||+||+.+|...
T Consensus 200 ~H~-~~E~~yVl~G-----~~~~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 200 THV-QEHGAYLISG-----QGMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp CCS-CCEEEEEEEC-----EEEEEETTEEEEEETTCEEEECTTCCEEEEEECS
T ss_pred ecc-CeEEEEEEeC-----EEEEEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 344 3555665433 1235556667888999999999999999999865
No 79
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=73.81 E-value=1.1 Score=47.88 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=14.7
Q ss_pred ecCceEEeCCCCcccc
Q 006870 513 HLGEAVFIPAGCPFQV 528 (628)
Q Consensus 513 ~lGEAVFIPAGCPHQV 528 (628)
++|||+|||||.||=.
T Consensus 245 ~pGd~~fipAG~~HAy 260 (394)
T 2wfp_A 245 NPGEAMFLFAETPHAY 260 (394)
T ss_dssp CTTCEEEECTTCCEEE
T ss_pred CCCCEEEcCCCCceEc
Confidence 7899999999999973
No 80
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=73.44 E-value=1.2 Score=45.50 Aligned_cols=30 Identities=10% Similarity=0.201 Sum_probs=23.1
Q ss_pred hCccceEEEeecCceEEeCCCCcccccccC
Q 006870 503 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 532 (628)
Q Consensus 503 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLk 532 (628)
|.+..=.+.=+.||++|||+||||+..|.-
T Consensus 220 y~l~~~~~~V~~GD~i~~~~~~~h~~~n~G 249 (266)
T 4e2q_A 220 YRLGDNWYPVQAGDVIWMAPFVPQWYAALG 249 (266)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEEES
T ss_pred EEECCEEEEecCCCEEEECCCCcEEEEeCC
Confidence 334444555678999999999999999864
No 81
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=73.42 E-value=1.8 Score=41.14 Aligned_cols=30 Identities=23% Similarity=0.190 Sum_probs=25.4
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCc
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQST 534 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSC 534 (628)
|..=+|.=..||.++||||.||..+|.-+-
T Consensus 125 l~g~~~~L~~Gds~~iP~g~~H~~~N~~d~ 154 (166)
T 2vpv_A 125 VCKNKFLSVKGSTFQIPAFNEYAIANRGND 154 (166)
T ss_dssp ETTEEEEEETTCEEEECTTCEEEEEECSSS
T ss_pred ECCEEEEEcCCCEEEECCCCCEEEEECCCC
Confidence 445577788999999999999999997763
No 82
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=72.52 E-value=2.5 Score=43.32 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=35.5
Q ss_pred EEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHHHHhcCCC
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN 562 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~ 562 (628)
++.=..||+++||+|+||+++|..+---+.+-+++|.+... +.|+.=++.+|.
T Consensus 279 ~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ 331 (361)
T 2vqa_A 279 VSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQS-IDLSTWLASNPS 331 (361)
T ss_dssp EEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCC-EEHHHHHHTSCH
T ss_pred EEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcce-eeHHHHhhhCCH
Confidence 56667899999999999999998653334455556554221 234445677765
No 83
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=72.33 E-value=2 Score=44.95 Aligned_cols=40 Identities=18% Similarity=-0.020 Sum_probs=30.4
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCCcceeeccccCC
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 544 (628)
|.+=++.=..||+|+||+|.+|+.+|...---+-++|..|
T Consensus 136 v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d~ 175 (354)
T 2d40_A 136 VDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDL 175 (354)
T ss_dssp ETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECH
T ss_pred ECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEECc
Confidence 4556788889999999999999999986532344566554
No 84
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=71.83 E-value=1.3 Score=48.08 Aligned_cols=16 Identities=38% Similarity=0.557 Sum_probs=14.7
Q ss_pred eecCceEEeCCCCccc
Q 006870 512 QHLGEAVFIPAGCPFQ 527 (628)
Q Consensus 512 Q~lGEAVFIPAGCPHQ 527 (628)
=++|||+|||||.||=
T Consensus 270 L~pGea~flpAg~~HA 285 (440)
T 1pmi_A 270 LNKGEAMFLQAKDPHA 285 (440)
T ss_dssp ECTTCEEEECTTCCEE
T ss_pred cCCCCEEecCCCCccc
Confidence 4689999999999997
No 85
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=68.94 E-value=1.8 Score=43.72 Aligned_cols=43 Identities=21% Similarity=0.386 Sum_probs=30.7
Q ss_pred CcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCC
Q 006870 486 GEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 486 DQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
++.+|+-.-. -++.|..=++.=..||+++||+|.||+++|..+
T Consensus 91 eE~~~Vl~G~-----l~v~v~g~~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 91 EAVLFVVEGE-----LSLTLQGQVHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp EEEEEEEESC-----EEEEESSCEEEECTTEEEEECTTCCEEEECCSS
T ss_pred eEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCcEEEEECCC
Confidence 5566654331 123344557778899999999999999999854
No 86
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=68.41 E-value=2.4 Score=45.13 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=25.2
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCC
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
|.+=++.=..||+|+||+|+.|+++|--+
T Consensus 139 vdG~~~~~~~GD~v~iP~g~~H~~~N~gd 167 (368)
T 3nw4_A 139 VNGDPVRMSRGDLLLTPGWCFHGHMNDTD 167 (368)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEECSS
T ss_pred ECCEEEEEeCCCEEEECCCCcEEeEeCCC
Confidence 45668888999999999999999999644
No 87
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=67.67 E-value=2.4 Score=45.43 Aligned_cols=29 Identities=21% Similarity=0.035 Sum_probs=25.8
Q ss_pred CccceEEEeecCceEEeCCCCcccccccC
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 532 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLk 532 (628)
-|.+-++.-..||+||||+|.+||+.|.-
T Consensus 328 ~V~ge~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 328 IVGGKRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEECC
T ss_pred EECCEEEEEeCCCEEEECCCCeEEeEeCC
Confidence 35678899999999999999999999974
No 88
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=67.54 E-value=2 Score=42.38 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=26.4
Q ss_pred HhCccceEEEeecCceEEeCCCCcccccccCC
Q 006870 502 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 502 EyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
+|-+..=++.=..||.+|++|||||+.+|.-.
T Consensus 198 ~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 198 LYKLEENYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp EEEETTEEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEECCEEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 45566666777899999999999999999754
No 89
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=66.66 E-value=3.5 Score=38.69 Aligned_cols=27 Identities=30% Similarity=0.474 Sum_probs=23.2
Q ss_pred ceEEEeecCceEEeCCCCcccccccCC
Q 006870 507 PWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 507 pWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
.-++.=..||+++||+|.||..+|.-+
T Consensus 82 ~~~~~l~~GDv~~~P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 82 RDTYKLDQGDAIKIQAGTPFYLINPDN 108 (178)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEECCS
T ss_pred cEEEEECCCCEEEECCCCeEEEEeCCC
Confidence 346677889999999999999999864
No 90
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=66.63 E-value=3.8 Score=42.46 Aligned_cols=38 Identities=16% Similarity=0.273 Sum_probs=27.2
Q ss_pred ceEEEeecCceEEeCCCCcccccccCCcceeeccccCC
Q 006870 507 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 507 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 544 (628)
.-++.=..||+++||+|+||+++|..+--=+.+-+++|
T Consensus 300 ~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESS
T ss_pred EEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECC
Confidence 34566779999999999999999986532223344444
No 91
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=65.37 E-value=4.7 Score=38.63 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=21.5
Q ss_pred EEEeecCceEEeCCCCcccccccCC
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
++.=..||.|+||||.||...+-..
T Consensus 123 ~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 123 QVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp EEECCCSCEEEECTTCCBCCCCSSC
T ss_pred EEEECCCCEEEECCCCeEeeecCCC
Confidence 4556899999999999999888665
No 92
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=63.41 E-value=3.5 Score=45.44 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=25.7
Q ss_pred ecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 513 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 513 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
+.||+|+||||.||-..|.-+--=+++-++.+-
T Consensus 118 ~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~ 150 (493)
T 2d5f_A 118 NEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTS 150 (493)
T ss_dssp ETTEEEEECTTCCEEEEECSSSCEEEEEEECTT
T ss_pred cCCCEEEECCCCcEEEEeCCCCCEEEEEEecCc
Confidence 679999999999999999987555555444433
No 93
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=63.06 E-value=2.4 Score=43.40 Aligned_cols=25 Identities=12% Similarity=0.215 Sum_probs=22.2
Q ss_pred eEEEeecCceEEeCCCCcccccccC
Q 006870 508 WSFEQHLGEAVFIPAGCPFQVRNLQ 532 (628)
Q Consensus 508 Wtf~Q~lGEAVFIPAGCPHQVRNLk 532 (628)
-++.=..||+++||+|.+|..+|..
T Consensus 96 ~~~~l~~GD~~~ip~g~~H~~~n~~ 120 (361)
T 2vqa_A 96 EIADVDKGGLWYFPRGWGHSIEGIG 120 (361)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECS
T ss_pred EEEEEcCCCEEEECCCCeEEEEeCC
Confidence 4567778999999999999999986
No 94
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=62.99 E-value=3.6 Score=39.25 Aligned_cols=35 Identities=14% Similarity=0.024 Sum_probs=26.0
Q ss_pred EEEeecCceEEeCCCCcccccccCCcceeeccccCC
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 544 (628)
++.=+.||++ ||+|.||+.+|.-.---..+-.++|
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P 153 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIE 153 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEE
T ss_pred EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcC
Confidence 4556789999 9999999999987654444444444
No 95
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=62.63 E-value=2.6 Score=41.50 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=25.0
Q ss_pred CccceEEEeecCceEEeCCCCcccccccCCc
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQST 534 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSC 534 (628)
.|..=++.=..||+++||||.||+++|...|
T Consensus 82 ~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~ 112 (246)
T 1sfn_A 82 AVGGETRTLREYDYVYLPAGEKHMLTAKTDA 112 (246)
T ss_dssp ECSSCEEEECTTEEEEECTTCCCEEEEEEEE
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCCE
Confidence 3445566778899999999999999998544
No 96
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=60.86 E-value=3.6 Score=44.88 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.1
Q ss_pred ecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 513 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 513 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
+.||+|+||||.||-..|.-+--=+++-++++-|
T Consensus 132 ~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n 165 (459)
T 2e9q_A 132 REGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRN 165 (459)
T ss_dssp ETTEEEEECTTCCEEEEECSSSCEEEEEEEESSS
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCC
Confidence 5699999999999999999876555554444433
No 97
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=59.58 E-value=6.6 Score=38.15 Aligned_cols=37 Identities=14% Similarity=0.218 Sum_probs=27.6
Q ss_pred EEEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
++.=..||.|+||||.||...+-.+--=+|+.|.+++
T Consensus 128 ~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~ 164 (191)
T 1vr3_A 128 RISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGE 164 (191)
T ss_dssp EEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSS
T ss_pred EEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCC
Confidence 6777899999999999999887655433455555554
No 98
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=58.68 E-value=3.1 Score=41.35 Aligned_cols=46 Identities=20% Similarity=0.277 Sum_probs=30.7
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCcc-ceEEEeecCceEEeCCCCcccccccC
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVE-PWSFEQHLGEAVFIPAGCPFQVRNLQ 532 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVe-pWtf~Q~lGEAVFIPAGCPHQVRNLk 532 (628)
.|| ++|.+|+=.. .-||.|+ .=++.=..||.||||+|.||.+|+..
T Consensus 149 sHp-~EEiy~VLsG-----~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~rt~d 195 (217)
T 4b29_A 149 EHL-PEELYSVVSG-----RALFHLRNAPDLMLEPGQTRFHPANAPHAMTTLT 195 (217)
T ss_dssp ECS-SEEEEEEEEE-----CEEEEETTSCCEEECTTCEEEECTTCCEEEECCS
T ss_pred CCC-CceEEEEEeC-----CEEEEECCCCEEecCCCCEEEcCCCCceeEEECC
Confidence 466 4555554322 1145555 44566789999999999999999744
No 99
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=57.84 E-value=3.4 Score=42.11 Aligned_cols=25 Identities=12% Similarity=0.242 Sum_probs=21.1
Q ss_pred EEEeecCceEEeCCCCcccccccCC
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
++.=..||++++|||.+||++|-..
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~~ 134 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVES 134 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESSC
T ss_pred EEEEcCCCEEEECCCCCEEEEeCCC
Confidence 4556789999999999999999643
No 100
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=57.75 E-value=5.2 Score=39.39 Aligned_cols=29 Identities=24% Similarity=0.350 Sum_probs=24.3
Q ss_pred ccceEEEeecCceEEeCCCCcccccccCC
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
|..=++.=..||++++|||.||+.+|.-+
T Consensus 96 ~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 96 AEGKTFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp ETTEEEEEETTEEEEECTTCCCEEEECSS
T ss_pred ECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 44456777899999999999999999854
No 101
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=57.30 E-value=4.2 Score=40.51 Aligned_cols=30 Identities=13% Similarity=0.106 Sum_probs=24.5
Q ss_pred CccceEEEeecCceEEeCCCCcccccccCC
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
.|..=++.=..||++++|||.||+.+|.-+
T Consensus 98 ~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~ 127 (274)
T 1sef_A 98 SDGQETHELEAGGYAYFTPEMKMYLANAQE 127 (274)
T ss_dssp ECSSCEEEEETTEEEEECTTSCCEEEESSS
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 344446677789999999999999999854
No 102
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=57.08 E-value=3.2 Score=41.87 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=26.0
Q ss_pred HhCccceEEEeecCceEEeCCCCcccccccCC
Q 006870 502 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 502 EyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
+|-+..=++.=..||.+|+|+||||+.+|.-.
T Consensus 224 ~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 224 VYRLNQDWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEEETTEEEEEETTCEEEEEESCCEEEECCSS
T ss_pred EEEECCEEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 45555666777899999999999999999755
No 103
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=56.59 E-value=4.9 Score=44.53 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=26.3
Q ss_pred ecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 513 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 513 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
+.||+|.||||.||-..|.-+--=||+-++.+-|
T Consensus 131 ~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 131 NEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp CTTEEEEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 4699999999999999999876555554444444
No 104
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=54.76 E-value=6 Score=41.33 Aligned_cols=27 Identities=7% Similarity=0.105 Sum_probs=24.3
Q ss_pred ccceEEEeecCceEEeCCCCccccccc
Q 006870 505 VEPWSFEQHLGEAVFIPAGCPFQVRNL 531 (628)
Q Consensus 505 VepWtf~Q~lGEAVFIPAGCPHQVRNL 531 (628)
|.+-+|.=..||+++||+|++||++|-
T Consensus 303 v~~~~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 303 IGNETFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEECCCCeEEEEeC
Confidence 457888999999999999999999994
No 105
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=54.52 E-value=5.7 Score=43.52 Aligned_cols=29 Identities=17% Similarity=0.349 Sum_probs=22.8
Q ss_pred EeecCceEEeCCCCcccccccCCcceeec
Q 006870 511 EQHLGEAVFIPAGCPFQVRNLQSTVQLGL 539 (628)
Q Consensus 511 ~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 539 (628)
.=+.||+|+||||.+|-..|.-+--=+++
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i 144 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAV 144 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEE
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 33579999999999999999976434443
No 106
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=53.78 E-value=6 Score=42.39 Aligned_cols=29 Identities=17% Similarity=0.071 Sum_probs=25.4
Q ss_pred CccceEEEeecCceEEeCCCCcccccc-cC
Q 006870 504 GVEPWSFEQHLGEAVFIPAGCPFQVRN-LQ 532 (628)
Q Consensus 504 GVepWtf~Q~lGEAVFIPAGCPHQVRN-Lk 532 (628)
-|.+=++.-..||+|+||+|..|+++| --
T Consensus 158 ~v~G~~~~~~~GD~i~~P~g~~H~~~N~~g 187 (394)
T 3bu7_A 158 IVDGHKVELGANDFVLTPNGTWHEHGILES 187 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEECTT
T ss_pred EECCEEEEEcCCCEEEECcCCCEEEEcCCC
Confidence 455668999999999999999999999 53
No 107
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=52.12 E-value=7.3 Score=36.75 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=27.9
Q ss_pred ecCceEEeCCCCcccccccC----Ccceee-----ccccCCc
Q 006870 513 HLGEAVFIPAGCPFQVRNLQ----STVQLG-----LDFLFPE 545 (628)
Q Consensus 513 ~lGEAVFIPAGCPHQVRNLk----SCIKVA-----lDFVSPE 545 (628)
..||.+++|+|.+|++.+.. -||-++ +-|+.|.
T Consensus 85 ~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~GpL~~~~~~ 126 (165)
T 3cjx_A 85 TAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNVNFTQD 126 (165)
T ss_dssp ETTEEEEECTTCEECEECCTTCSSCEEEEEEEESCEEEECTT
T ss_pred CCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEeccceecCCC
Confidence 58999999999999999998 897777 5666654
No 108
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=52.04 E-value=9 Score=33.61 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=24.2
Q ss_pred hCccceEEEeecCceEEeCCCCcccccccC
Q 006870 503 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 532 (628)
Q Consensus 503 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLk 532 (628)
+-|..=++.=..||++|||+|.+|+.++-.
T Consensus 51 ~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 51 VKNQGREFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECT
T ss_pred EEECCEEEEecCCeEEEEcCCCCEEEEeCC
Confidence 344555667789999999999999998864
No 109
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=51.17 E-value=6.5 Score=42.66 Aligned_cols=27 Identities=30% Similarity=0.485 Sum_probs=23.7
Q ss_pred eEEEeecCceEEeCCCCcccccccC-Cc
Q 006870 508 WSFEQHLGEAVFIPAGCPFQVRNLQ-ST 534 (628)
Q Consensus 508 Wtf~Q~lGEAVFIPAGCPHQVRNLk-SC 534 (628)
.++.=+.||.++||+|.+|.+.|.- ++
T Consensus 128 ~~~~l~~GDv~~~P~G~~H~~~N~g~~~ 155 (445)
T 2cav_A 128 DTYKLDQGDAIKIQAGTPFYLINPDNNQ 155 (445)
T ss_dssp EEEEEETTEEEEECTTCCEEEEECCSSC
T ss_pred EEEEecCCCEEEECCCCcEEEEECCCCC
Confidence 5677788999999999999999996 54
No 110
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=46.38 E-value=9.9 Score=41.63 Aligned_cols=81 Identities=11% Similarity=0.061 Sum_probs=46.6
Q ss_pred ccCCCcCcceeeCHHH-HHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHH---HH
Q 006870 480 VTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRL---AE 555 (628)
Q Consensus 480 v~hPIHDQ~fYLd~~h-k~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rL---te 555 (628)
-.||-.++.+|+..-. +..+-.+-|-+-.+..=..||.++||+|.||.+.|...-+.+..=|+||.. ... .| +.
T Consensus 354 H~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~~s~~p-~~~-~laG~~s 431 (476)
T 1fxz_A 354 HYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTP-MIG-TLAGANS 431 (476)
T ss_dssp EEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEEEEESSSSC-CEE-ESSSTTC
T ss_pred eECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEECCCCC-cee-EccchhH
Confidence 3688777887776542 111122223233333357899999999999999996544554444446532 111 22 34
Q ss_pred HHhcCCC
Q 006870 556 EIRCLPN 562 (628)
Q Consensus 556 EfR~Lp~ 562 (628)
=|+.+|.
T Consensus 432 ~~~~~p~ 438 (476)
T 1fxz_A 432 LLNALPE 438 (476)
T ss_dssp TGGGSCH
T ss_pred HHHhCCH
Confidence 4666665
No 111
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=46.29 E-value=7.9 Score=37.21 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=29.4
Q ss_pred ceE-EEeecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 507 PWS-FEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 507 pWt-f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
+|+ ++..+||.|.||.|.+|...|.... |.++=||+-|
T Consensus 117 a~~~i~L~pGesvtIppg~~H~f~ageeg--vli~EvSt~~ 155 (175)
T 2y0o_A 117 VWHEIELEPGGQYTIPPNTKHWFQAGEEG--AVVTEMSSTS 155 (175)
T ss_dssp CCEEEEECTTCEEEECTTCCEEEEEEEEE--EEEEEEEECC
T ss_pred CCcEEEECCCCEEEECCCCcEEEEeCCCC--EEEEEEeCCC
Confidence 444 5899999999999999999995554 5566666554
No 112
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=44.43 E-value=11 Score=40.52 Aligned_cols=46 Identities=22% Similarity=0.327 Sum_probs=32.6
Q ss_pred CCCcCcceeeCHHHHHHHHHHhCc----cceEEEeecCceEEeCCCCcccccccC
Q 006870 482 HPLYGEVVYLNGDHKRKLKEEFGV----EPWSFEQHLGEAVFIPAGCPFQVRNLQ 532 (628)
Q Consensus 482 hPIHDQ~fYLd~~hk~kLkeEyGV----epWtf~Q~lGEAVFIPAGCPHQVRNLk 532 (628)
||=.++.+|+-.-. -.+|| ...++.=..||+++||+|.+|-+.|.-
T Consensus 66 h~~a~E~~yVl~G~-----g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g 115 (416)
T 1uij_A 66 HADADFLLFVLSGR-----AILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPH 115 (416)
T ss_dssp EESEEEEEEEEESC-----EEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECC
T ss_pred cCCCceEEEEEeeE-----EEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecC
Confidence 55556666665431 12333 356677788999999999999999993
No 113
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=41.78 E-value=13 Score=40.24 Aligned_cols=28 Identities=32% Similarity=0.334 Sum_probs=24.2
Q ss_pred ceEEEeecCceEEeCCCCcccccccC-Cc
Q 006870 507 PWSFEQHLGEAVFIPAGCPFQVRNLQ-ST 534 (628)
Q Consensus 507 pWtf~Q~lGEAVFIPAGCPHQVRNLk-SC 534 (628)
..++.=..||+++||+|.+|.+.|.- ++
T Consensus 102 ~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 102 RDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred CEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 45777788999999999999999996 54
No 114
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=40.53 E-value=13 Score=41.08 Aligned_cols=102 Identities=8% Similarity=-0.074 Sum_probs=54.7
Q ss_pred CCCceEEEEecCCChHHHHHHHHHHHHhhCCCCCCCCCcccCCCcCcceeeCHHH-HHHHHHHhCccceEEEeecCceEE
Q 006870 441 THPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVF 519 (628)
Q Consensus 441 ~~~GAlWdIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~h-k~kLkeEyGVepWtf~Q~lGEAVF 519 (628)
..+|.+.-+... +.|-|.. |.--.......-.....--.||-.++.+|+..-. +..+-.+-|-+-.+..=..||.++
T Consensus 351 ~~gG~v~~~~~~-~fP~L~~-l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~v 428 (510)
T 3c3v_A 351 PQAGSLKTANEL-NLLILRW-LGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLV 428 (510)
T ss_dssp TTTEEEEEECTT-TSTTHHH-HTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEeccc-cCccccc-ceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEE
Confidence 457777777664 5777652 2111111111111111113688777888876542 111122223333343467899999
Q ss_pred eCCCCcccccccCCcceeeccccCC
Q 006870 520 IPAGCPFQVRNLQSTVQLGLDFLFP 544 (628)
Q Consensus 520 IPAGCPHQVRNLkSCIKVAlDFVSP 544 (628)
||+|.||-+.|...-..+..=|+|+
T Consensus 429 iP~G~~H~~~Ng~e~l~~l~f~~s~ 453 (510)
T 3c3v_A 429 VPQNFAVAGKSQSDNFEYVAFKTDS 453 (510)
T ss_dssp ECTTCEEEEEECSSEEEEEEEESSS
T ss_pred ECCCCeEEEEeCCCCEEEEEEECCC
Confidence 9999999999954444444433344
No 115
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=39.97 E-value=11 Score=32.14 Aligned_cols=29 Identities=28% Similarity=0.710 Sum_probs=26.7
Q ss_pred ccCCCCCccccccccCCCCCcchhhhhhH
Q 006870 2 CCNICRIPIIDYHRHCGNCMYDLCLSCCQ 30 (628)
Q Consensus 2 ~Cd~C~tsI~D~HRsC~~CsydLCL~CC~ 30 (628)
.||.|...+..+-=.|..|.|+|=+.|-.
T Consensus 49 ~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~ 77 (89)
T 1v5n_A 49 TCDKCEEEGTIWSYHCDECDFDLHAKCAL 77 (89)
T ss_dssp CCTTTSCCCCSCEEECTTTCCCCCHHHHH
T ss_pred EeCCCCCcCCCcEEEcCCCCCeEcHHhcC
Confidence 49999999999999999999999999975
No 116
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=37.72 E-value=7.9 Score=35.23 Aligned_cols=40 Identities=23% Similarity=0.320 Sum_probs=34.3
Q ss_pred CCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCC
Q 006870 483 PLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 524 (628)
Q Consensus 483 PIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGC 524 (628)
|.|...-.+.+.+-+.|+++|||.-|.| +-||-|.|=||=
T Consensus 16 p~h~rrk~msa~LskeLr~ky~vr~~~I--kkGD~V~Vi~G~ 55 (120)
T 1vq8_T 16 PLHERHKQVRATLSADLREEYGQRNVRV--NAGDTVEVLRGD 55 (120)
T ss_dssp CGGGSGGGGEEEECHHHHHHHTCSEEEC--CTTCEEEECSST
T ss_pred CcchhhheeeCcCCHHHHHhhccccccc--cCCCEEEEEecC
Confidence 7888888888888888999999999875 579999999984
No 117
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=37.19 E-value=16 Score=37.67 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=22.2
Q ss_pred EEEeecCceEEeCCCCcccccccCC
Q 006870 509 SFEQHLGEAVFIPAGCPFQVRNLQS 533 (628)
Q Consensus 509 tf~Q~lGEAVFIPAGCPHQVRNLkS 533 (628)
++.=..||.++||+|.+|.++|...
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~~ 147 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALEE 147 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEEE
T ss_pred EEEeCCCCEEEECCCCeEEEEECCC
Confidence 5577799999999999999999865
No 118
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.35 E-value=9.7 Score=34.66 Aligned_cols=39 Identities=26% Similarity=0.413 Sum_probs=33.5
Q ss_pred CCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCC
Q 006870 483 PLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 523 (628)
Q Consensus 483 PIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAG 523 (628)
|.|...-++.+.+=+.|+++|||.-|.| +-||-|.|=+|
T Consensus 19 p~h~r~k~msa~LSkeLR~ky~~r~~~I--kkGD~V~Vi~G 57 (121)
T 3j21_U 19 PLHVRQKLMSAPLSRELREKYKVRNLPV--RVGDKVRIMRG 57 (121)
T ss_dssp CTTGGGGGSEEEBCHHHHHHTCCSEEEC--CSSSEEEECSS
T ss_pred CcchhhhhhcCcCCHHHHHHhCCccccc--ccCCEEEEeec
Confidence 7777777777777788999999999988 57999999998
No 119
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=35.15 E-value=14 Score=33.46 Aligned_cols=52 Identities=8% Similarity=-0.109 Sum_probs=32.9
Q ss_pred cCCCcCcceeeCHHHHHHHHHHhCccc--eEEEeecCceEEeCCCCccc-ccccCCcceee
Q 006870 481 THPLYGEVVYLNGDHKRKLKEEFGVEP--WSFEQHLGEAVFIPAGCPFQ-VRNLQSTVQLG 538 (628)
Q Consensus 481 ~hPIHDQ~fYLd~~hk~kLkeEyGVep--Wtf~Q~lGEAVFIPAGCPHQ-VRNLkSCIKVA 538 (628)
.|| +.+.+|+=.-- +..+-|-++ |++ ..||.+++|+|.+|+ +.+...|+=+.
T Consensus 61 ~H~-~~ee~~VL~G~---~~~~~g~~~~~~~~--~~Gd~~~~p~g~~H~p~~~~e~~~~l~ 115 (145)
T 2o1q_A 61 VHV-GPGEYFLTKGK---MDVRGGKAAGGDTA--IAPGYGYESANARHDKTEFPVASEFYM 115 (145)
T ss_dssp EES-SCEEEEEEEEE---EEETTCGGGTSEEE--ESSEEEEECTTCEESCCEEEEEEEEEE
T ss_pred CCC-CCEEEEEEEeE---EEEcCCCEecceEe--CCCEEEEECcCCccCCeECCCCeEEEE
Confidence 455 45555553221 222333333 444 689999999999999 88888886443
No 120
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=32.47 E-value=9.6 Score=41.93 Aligned_cols=119 Identities=10% Similarity=0.085 Sum_probs=62.5
Q ss_pred CCCceEEEEecCCChHHHHHHHHHHHHhhCCCCCCCCCcccCCCcCcceeeCHHH-HHHHHHHhCccceEEEeecCceEE
Q 006870 441 THPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVF 519 (628)
Q Consensus 441 ~~~GAlWdIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~h-k~kLkeEyGVepWtf~Q~lGEAVF 519 (628)
..+|.+.-+.. .+.|-|... ..-...+...-.....--.||=.++.+|+..-. +..+-.+.|-+-.+..=..||.++
T Consensus 346 ~~gG~v~~~~~-~~~P~L~~l-gls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~v 423 (493)
T 2d5f_A 346 PKAGRISTLNS-LTLPALRQF-GLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLV 423 (493)
T ss_dssp TTTEEEEEEST-TTSTTHHHH-TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEecc-ccCcccccc-ceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEE
Confidence 45777877765 467776532 111111111111111113678777878876542 111222223222333457899999
Q ss_pred eCCCCcccccccCCcceeeccccCCcCHHHHHHHHHHHhcCCCc
Q 006870 520 IPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPND 563 (628)
Q Consensus 520 IPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~ 563 (628)
||+|.+|...|...-..+..=|.|+..-..- |+.=|+.+|.+
T Consensus 424 vP~G~~H~~~n~~e~~~~l~~~ts~~p~~~~--l~s~~~~~p~e 465 (493)
T 2d5f_A 424 VPQNFVVAEQGGEQGLEYVVFKTHHNAVSSY--IKDVFRAIPSE 465 (493)
T ss_dssp ECTTCEEEEEEEEEEEEEEEEESSTTCCEEE--HHHHHHHSCHH
T ss_pred ECCCCeEeeeeCCCCEEEEEEECCCCCccee--HHHHHHhCCHH
Confidence 9999999999975444443323233221111 26667778763
No 121
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=32.30 E-value=20 Score=39.32 Aligned_cols=34 Identities=15% Similarity=0.041 Sum_probs=25.3
Q ss_pred ecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 513 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 513 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
+.||+|.||||.||=.-|.-.-==+++-++.|=|
T Consensus 150 ~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n 183 (466)
T 3kgl_A 150 RTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLAS 183 (466)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEEESSS
T ss_pred cCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCC
Confidence 4699999999999999998755444454554444
No 122
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=32.24 E-value=17 Score=36.92 Aligned_cols=21 Identities=29% Similarity=0.861 Sum_probs=16.6
Q ss_pred CccCCCCC----------ccccccccCCCCCcc
Q 006870 1 MCCNICRI----------PIIDYHRHCGNCMYD 23 (628)
Q Consensus 1 m~Cd~C~t----------sI~D~HRsC~~Csyd 23 (628)
|||-||.+ |+-||+ |++|.=+
T Consensus 35 ~yCPnCG~~~l~~f~nN~PVaDF~--C~~C~Ee 65 (257)
T 4esj_A 35 SYCPNCGNNPLNHFENNRPVADFY--CNHCSEE 65 (257)
T ss_dssp CCCTTTCCSSCEEC----CCCEEE--CTTTCCE
T ss_pred CcCCCCCChhhhhccCCCcccccc--cCCcchh
Confidence 79999988 567886 8888643
No 123
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=31.23 E-value=24 Score=38.62 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=25.9
Q ss_pred ecCceEEeCCCCcccccccCCcceeeccccCCcC
Q 006870 513 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 546 (628)
Q Consensus 513 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 546 (628)
+.||+|.||||.+|=.-|--+-==|++-++.+-|
T Consensus 135 ~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n 168 (465)
T 3qac_A 135 REGDIFAMPAGVSHWAYNNGDQPLVAVILIDTAN 168 (465)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEECTTS
T ss_pred cCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCC
Confidence 5799999999999999998765455555555444
No 124
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=30.40 E-value=26 Score=37.21 Aligned_cols=29 Identities=10% Similarity=0.170 Sum_probs=24.6
Q ss_pred ceEEEeecCceEEeCCCCcccccccCCcc
Q 006870 507 PWSFEQHLGEAVFIPAGCPFQVRNLQSTV 535 (628)
Q Consensus 507 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCI 535 (628)
+=+|.=..||++.||++++||..|...|+
T Consensus 316 ~~~~~w~~gD~fvvP~w~~h~~~n~~~a~ 344 (368)
T 3nw4_A 316 GETTKLEKGDMFVVPSWVPWSLQAETQFD 344 (368)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEESSSEE
T ss_pred CEEEEecCCCEEEECCCCcEEEEeCCCEE
Confidence 44677789999999999999999986654
No 125
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=26.38 E-value=20 Score=29.92 Aligned_cols=29 Identities=24% Similarity=0.790 Sum_probs=22.4
Q ss_pred ccCCCCCccc----cccccCCCCCcchhhhhhH
Q 006870 2 CCNICRIPII----DYHRHCGNCMYDLCLSCCQ 30 (628)
Q Consensus 2 ~Cd~C~tsI~----D~HRsC~~CsydLCL~CC~ 30 (628)
||.+|.+.|+ .....||.|.+..|..|-.
T Consensus 27 wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 27 WCAQCSFGFIYEREQLEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp CCSSSCCCEECCCSCSCEECTTTCCEECSSSCS
T ss_pred ECcCCCchheecCCCCceEeCCCCCccccccCC
Confidence 5778888664 2346799999999999864
No 126
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=24.89 E-value=31 Score=32.09 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=26.5
Q ss_pred EeecCceEEeCCCCccccccc----CCcceee-----ccccCC
Q 006870 511 EQHLGEAVFIPAGCPFQVRNL----QSTVQLG-----LDFLFP 544 (628)
Q Consensus 511 ~Q~lGEAVFIPAGCPHQVRNL----kSCIKVA-----lDFVSP 544 (628)
.-..||-+++|+|.+|++.+. .-||=.+ +.|+.|
T Consensus 81 ~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~~~G~l~~~~~ 123 (159)
T 3ebr_A 81 VAHAGSVVYETASTRHTPQSAYAEGPDIITFNIVAGELLYLDD 123 (159)
T ss_dssp CBCTTCEEEECSSEEECEEESSSSSSCEEEEEEEESCEEEECT
T ss_pred EECCCeEEEECCCCcceeEeCCCCCCCEEEEEEecCccEecCC
Confidence 345899999999999999998 6796544 356555
No 127
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=24.64 E-value=38 Score=36.25 Aligned_cols=34 Identities=26% Similarity=0.264 Sum_probs=25.4
Q ss_pred EeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 511 EQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 511 ~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
.=..||+++||+|.||-+.|. +-..+..=|.+++
T Consensus 310 ~l~~Gdv~vvP~g~~h~~~n~-~~~~~l~f~~~~~ 343 (416)
T 1uij_A 310 ELSEDDVFVIPAAYPFVVNAT-SNLNFLAFGINAE 343 (416)
T ss_dssp EEETTCEEEECTTCCEEEEES-SSEEEEEEEETCT
T ss_pred EecCCcEEEECCCCeEEEEcC-CCeEEEEEEcCCC
Confidence 667899999999999999998 4444443344554
No 128
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=22.65 E-value=39 Score=37.28 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=23.5
Q ss_pred ecCceEEeCCCCcccccccCCcceee---ccccCC
Q 006870 513 HLGEAVFIPAGCPFQVRNLQSTVQLG---LDFLFP 544 (628)
Q Consensus 513 ~lGEAVFIPAGCPHQVRNLkSCIKVA---lDFVSP 544 (628)
+.||++.||||.||-.-|--+-==|| +|-.++
T Consensus 115 ~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~ 149 (496)
T 3ksc_A 115 REGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSS 149 (496)
T ss_dssp CTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCT
T ss_pred CCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcc
Confidence 56999999999999999976543334 444444
No 129
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=22.16 E-value=56 Score=30.85 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=27.1
Q ss_pred EEeecCceEEeCCCCcccccccCCcceeeccccCCc
Q 006870 510 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 545 (628)
Q Consensus 510 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 545 (628)
..-..||+++.|.|-+|+|+|.-.=.-|.+.--+|-
T Consensus 119 ~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp 154 (171)
T 3eqe_A 119 YFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPP 154 (171)
T ss_dssp EEEETTCEEEECTTCEEEEECCSSSCEEEEEEEESC
T ss_pred EEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCCC
Confidence 344689999999999999999876555555555554
Done!