Query 006872
Match_columns 628
No_of_seqs 239 out of 1655
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 11:11:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006872.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006872hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x38_A Beta-D-glucan exohydrol 100.0 4E-132 1E-136 1117.6 54.2 594 27-625 4-602 (602)
2 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 2E-128 7E-133 1100.3 46.8 574 33-626 20-616 (822)
3 3bmx_A Uncharacterized lipopro 100.0 1E-112 5E-117 964.1 37.2 528 32-626 28-640 (642)
4 3abz_A Beta-glucosidase I; gly 100.0 6E-112 2E-116 978.6 34.5 508 36-626 3-724 (845)
5 3zyz_A Beta-D-glucoside glucoh 100.0 6E-111 2E-115 957.3 35.4 523 35-626 12-583 (713)
6 2x41_A Beta-glucosidase; hydro 100.0 6E-110 2E-114 954.9 31.7 516 37-626 2-604 (721)
7 3sql_A Glycosyl hydrolase fami 100.0 1.6E-87 5.4E-92 732.8 35.4 470 44-583 13-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 8.6E-75 2.9E-79 606.1 20.4 311 49-390 15-342 (351)
9 4gvf_A Beta-hexosaminidase; TI 100.0 6.5E-64 2.2E-68 522.2 9.2 279 65-375 18-310 (349)
10 2oxn_A Beta-hexosaminidase; TI 100.0 5.9E-63 2E-67 514.5 10.9 277 65-374 18-303 (340)
11 4g6c_A Beta-hexosaminidase 1; 100.0 1.8E-62 6.3E-67 511.8 13.9 278 65-379 28-322 (348)
12 3lab_A Putative KDPG (2-keto-3 62.6 15 0.00051 35.0 6.8 58 261-339 78-137 (217)
13 1wv2_A Thiazole moeity, thiazo 41.3 78 0.0027 30.9 8.1 84 262-359 150-240 (265)
14 1gng_X Frattide, glycogen synt 35.3 27 0.00091 23.1 2.5 22 348-373 13-34 (39)
15 1z65_A PRPLP, prion-like prote 24.4 45 0.0015 20.8 2.0 18 5-22 9-26 (30)
No 1
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=3.6e-132 Score=1117.57 Aligned_cols=594 Identities=74% Similarity=1.229 Sum_probs=542.2
Q ss_pred CCCCCCCCHHHHHHHHHhhCCHHHHHhcccccccCCCchHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 006872 27 KYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALS 106 (628)
Q Consensus 27 ~~~~~~~~~~~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~ 106 (628)
||+|++++.++||++|+++||||||||||+++.......+.++++++|||+++++..+.+..+++||+++++.+|+.+..
T Consensus 4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~ 83 (602)
T 1x38_A 4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS 83 (602)
T ss_dssp GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999988766667789999999999998877777888999999999999999988
Q ss_pred cCCCCCcEEEecCCCCcccCCCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCcccccc
Q 006872 107 TRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESY 186 (628)
Q Consensus 107 ~~~giP~~i~~D~e~G~~~~~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~~rsf 186 (628)
+|++||+++++|+|||.+.+.++|.||+++++|||||+++++++|+++|+|+|++|||++|||++||.|||+|||++|||
T Consensus 84 ~rlgiP~l~~~D~~~G~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aP~vdv~r~p~~GR~~esf 163 (602)
T 1x38_A 84 TRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESY 163 (602)
T ss_dssp SSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGGGSS
T ss_pred ccCCCCcEEEEcCCCceeCCCCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHcCCCEEeeceeccccCCCcCccccCc
Confidence 99999999999999999877789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHHHHH
Q 006872 187 SEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSIS 266 (628)
Q Consensus 187 geDp~lv~~~a~~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~ 266 (628)
||||+++++|+.||+|+|++....+..|.+|+.+..||++|+|||||||+++.++|.....+++++|++.||+||+++|+
T Consensus 164 geDP~lv~~~a~~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~ 243 (602)
T 1x38_A 164 SEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMD 243 (602)
T ss_dssp CSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCccccccccccccccCCeEEEeccccCCCccccCcccccCcCCHHHHHHHHHHHHHHHHH
Confidence 99999999997799999974322222222333222499999999999999988888777788999999999999999999
Q ss_pred cCcceEEEeccccCCccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChHH
Q 006872 267 KGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKE 346 (628)
Q Consensus 267 ~g~~~vM~sy~~~~g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~ 346 (628)
+|+.+|||||+.+||+|+|+|+++|+++||+||||+|+|||||++|+++...++.+..+++++|++||+||+|.|.++..
T Consensus 244 ag~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~~~~~~a~~~al~AG~D~~m~~~~~~~ 323 (602)
T 1x38_A 244 KGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQ 323 (602)
T ss_dssp TTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSCHHH
T ss_pred cCCCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcCCCHHHHHHHHHHcCCCcccCCcchhh
Confidence 99999999999999999999999999999999999999999999999998766656778899999999999999888888
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhccCCHHHHHHHHHHHHhhhhhhccCCCCCC--C
Q 006872 347 FIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADK--P 424 (628)
Q Consensus 347 ~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~e~--~ 424 (628)
+.+.|.+||++|+++++|||+||+|||++|+++|+|++|+.+......+++++|+++++++|++||||||| ++ +
T Consensus 324 ~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN----~~~~~ 399 (602)
T 1x38_A 324 FISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKN----GKTST 399 (602)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHHCEEEEE----CSSTT
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCcchhhccCCHHHHHHHHHHHHhceEEecc----CCCCC
Confidence 88999999999999999999999999999999999999987765445789999999999999999999999 55 4
Q ss_pred ---cccCCCCCCeEEEEcccCCccCcccCCcEEeecCCCCCCCCCccCHHHHHhcccCCCceEEecCCCChhHHhhcCCc
Q 006872 425 ---LLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFS 501 (628)
Q Consensus 425 ---~LPL~~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D 501 (628)
+|||+++.+||+|+|++++....++|+|+..|++.++. .....++++++++.+.....+.|..+++.....++++|
T Consensus 400 ~~~~LPL~~~~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~-~~~~~t~~~~l~~~~~~~~~v~~~~~~~~~~~~a~~aD 478 (602)
T 1x38_A 400 DAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTGR-TTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFS 478 (602)
T ss_dssp SCCCCSCCSCCSEEEEESTTTTCHHHHHCSSSSSTTCCSSC-CSSCBCHHHHHHHHSCTTCEEEEESSCCHHHHHHTTCS
T ss_pred cccccccCCCCCEEEEEcCCCccccccCCcceeeccCCCCC-CCCcccHHHHHHHHhCCCeEEEEcCCCCHHHHHHhhCC
Confidence 99998756799999999998877899999888876654 35668999999998766678888777765555577899
Q ss_pred eEEEEEeccCCccccCCCccccCChhhHHHHHHHhcCCCeEEEEECCccccccccccCcceeEEccCCCchhHHHHHHHh
Q 006872 502 YAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLF 581 (628)
Q Consensus 502 ~~iv~vg~~~~~e~~gd~~~l~l~~~~~~li~~v~~~~~~VvV~~~g~P~~l~~~~~~v~ail~a~~~g~~g~a~advL~ 581 (628)
++||++|.+++.+.+|||.++.||..|.+||+++++++|+|||+++|+|+.+.+|.++++|||++|+||++++|+|||||
T Consensus 479 ~viv~~g~~~~~e~~gdr~~l~lp~~q~~li~~v~~~~~~VvVl~~g~P~~l~~~~~~~~Ail~a~~pG~~g~AiadvL~ 558 (602)
T 1x38_A 479 YAIVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDALVAAWLPGSEGQGVTDALF 558 (602)
T ss_dssp CEEEEEECCCCCGGGGCCSSCCCCSSSHHHHHHHHTTSCEEEEEECSSCCCCHHHHHHCSEEEEEECCCSBTHHHHHHHT
T ss_pred EEEEEeccCcccccCCCcCCcCCChhHHHHHHHHHhCCCEEEEEeCCCceeccchhhccCeEEeccCCchHHHHHHHHHc
Confidence 99999999888888889999999999999999999988999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccccccccCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 006872 582 GDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPT 625 (628)
Q Consensus 582 G~~~PsGkLPvt~p~~~~~~p~~~g~~~~~~~~pFG~GLsYt~~ 625 (628)
|++||+||||+|||++.+|+|.++||++|+|+||||||||||+.
T Consensus 559 G~~nPsGkLP~t~p~~~~~~p~~~g~~~~~plypFG~GLSYt~~ 602 (602)
T 1x38_A 559 GDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTTNAT 602 (602)
T ss_dssp TSSCCCCCCSSCBCSCGGGCSCCTTCSSCCCSBCTTCCBCCCCC
T ss_pred CCCCCCccCcccccCccccCCccCCCCCCCccCcCCCCcCCCCC
Confidence 99999999999999999999999999999999999999999974
No 2
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=2.1e-128 Score=1100.33 Aligned_cols=574 Identities=43% Similarity=0.776 Sum_probs=512.8
Q ss_pred CCHHHHHHHHHhhCCHHHHHhcccccccCCCchHHHhhcccceEEeCCCCCC--CCCCCHHHHHHHHHHHHHhhhc---c
Q 006872 33 QPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVP--APKATAETWVNMVNGLQKGALS---T 107 (628)
Q Consensus 33 ~~~~~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~--~~~~~~~~~~~~~~~lq~~~~~---~ 107 (628)
.++++||++|+++||||||||||++++......+.+++|++|||+++++..+ .+..+++||+++++.+|+.+.. .
T Consensus 20 ~~~~~rV~~ll~~MTLeEKiGQL~~~~~~~~~~~~i~~~~vGgvi~~~~~~p~~~~~~s~~q~~~l~~~lq~~a~~~~~~ 99 (822)
T 3rrx_A 20 PAVEAQIEKLLAKMTIEQKVAQMIQPEIGYLTVEQMRKYGFGSYLNGGNTAPYGNKRADQATWLKYADEMYLAAMDSTLD 99 (822)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHEECBTTTCCHHHHHHHCCSEEEECSSSCGGGCSSCCHHHHHHHHHHHHHHHHCCTTT
T ss_pred ccHHHHHHHHHHcCCHHHHHhCccccccCCCCHHHHHhCCCceEEECCccCccccccCCHHHHHHHHHHHHHHHHhhhcc
Confidence 4689999999999999999999999877766778899999999998876433 3567999999999999998764 5
Q ss_pred CCCCCcEEEecCCCCcccCCCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCccccccC
Q 006872 108 RLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYS 187 (628)
Q Consensus 108 ~~giP~~i~~D~e~G~~~~~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~~rsfg 187 (628)
|++||+++++|+|||.+.+.++|.||+++++|||||+++++++|+++|+|+|++|||++|||++||.|||+|||++|+||
T Consensus 100 rlgIPll~~~D~~~G~~~~~~aT~FP~~i~laAt~d~~L~~~~g~~ia~E~ra~Gin~~~aPvvDv~rdPr~GR~~EsfG 179 (822)
T 3rrx_A 100 GIAIPTVWGTDAMHGHSNVYGATLFPHNIGLGAARDTDLIKRIGQATAKEVAATGIEWSFAPTVAVVRDDRWGRTYESYS 179 (822)
T ss_dssp CCCCCCEEEEECTTSSTTSTTCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHTTTCCEEEEEECCCCSCTTSTTGGGSSC
T ss_pred cCCCCeEEEeccCCcEEccCCCCCCcCHHHHhhcCCHHHHHHHHHHHHHHHHhcCCcEeeccccccccCCCcCccccCCC
Confidence 79999999999999998888899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHh-ccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHHHHH
Q 006872 188 EDHKIVQAMTE-IIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSIS 266 (628)
Q Consensus 188 eDp~lv~~~a~-~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~ 266 (628)
|||+++++|+. ||+|+|+....+ + .+..||++|+|||||||+++.++|...+.+++++|++.||+||+.+|+
T Consensus 180 EDP~lv~~~a~A~V~GlQ~~~~~~------~-~~~~gV~a~~KHFpG~G~~~~~r~~~~~~vs~~~L~e~~L~PF~~aI~ 252 (822)
T 3rrx_A 180 EDPDLVKRYAGEMVTGIQGDVGAD------F-LKGSNRIATAKHFVGDGGTERGVDRGNTLIDEKGLRDIHSAGYFSAIN 252 (822)
T ss_dssp SCHHHHHHHHHHHHHHHHCCSSTT------T-TCTTCCEEEEEEESCGGGBGGGCTTCEECCCHHHHHHTTSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccccc------c-ccCCCeEEEeeeccCCCccccCccCccCcCCHHHHHHHhhHHHHHHHH
Confidence 99999999997 999999631100 0 013599999999999999888888888889999999999999999999
Q ss_pred cCcceEEEeccccCCccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChHH
Q 006872 267 KGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKE 346 (628)
Q Consensus 267 ~g~~~vM~sy~~~~g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~ 346 (628)
+|+.+|||||+.+||+|+|.|+++|+++||+||||+|+|||||++|+.+... ..+++++|++||+||+|.+.++..
T Consensus 253 ag~~sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~~----~~ea~~~Al~AG~Dm~m~~~~~~~ 328 (822)
T 3rrx_A 253 QGVQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEGC----DLEQCAQAINAGVDVIMVPEHFEA 328 (822)
T ss_dssp TTCSEEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTTC----BTTBCHHHHHHTCCBEECTTTHHH
T ss_pred cCCCEEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcCC----hHHHHHHHHHcCCCEECCCccHHH
Confidence 9999999999999999999999999999999999999999999999887542 235678999999999999877777
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcc----hhhccCCHHHHHHHHHHHHhhhhhhccCCCCC
Q 006872 347 FIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTS----LVNELGSQEHRELAREAVRKSLVLLKNGEAAD 422 (628)
Q Consensus 347 ~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~----~~~~~~~~~~~~la~~~a~~sivLLKN~~~~e 422 (628)
+++.|.+||++|+|+++|||+||+|||++|+++|||++|++... ....+++++|+++|+++|++||||||| +
T Consensus 329 ~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd~p~~~~~~~~~~~~~v~~~eh~~lAre~A~eSiVLLKN----~ 404 (822)
T 3rrx_A 329 FYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFTKSKPSARPESQHPQWLGAAEHRTLAREAVRKSLVLLKN----N 404 (822)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTTSCCGGGSGGGSCGGGTTCHHHHHHHHHHHHHHCEEEEE----G
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCcccccccccccccCCHHHHHHHHHHHHhceEEEec----C
Confidence 88999999999999999999999999999999999999875421 124688999999999999999999999 6
Q ss_pred CCcccCCCCCCeEEEEcccCCccCcccCCcEEeecCCCC--CCCCCccCHHHHHhcccCC-CceEEecCCCChhHHhhcC
Q 006872 423 KPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGG--NDLTAGSTILHAVSNTVDP-TTQVVFNENPDANFVKSNK 499 (628)
Q Consensus 423 ~~~LPL~~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g--~~~~~~~t~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 499 (628)
+++|||++. +||+|||+++++...++|+|+..|++... .+.+...|++++|++++.. ...+.|.... ..+++
T Consensus 405 ~~~LPL~~~-~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~v~~~~~~----~~a~~ 479 (822)
T 3rrx_A 405 ESILPIKAS-SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLSESG----EYTSK 479 (822)
T ss_dssp GGCCSBCTT-SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCEEEECTTC----CCSSC
T ss_pred CCccCCCCC-CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcCCeEEEcccc----ccccc
Confidence 789999875 79999999999988889999988876432 2245678999999987642 3456665322 12467
Q ss_pred CceEEEEEeccCCccccCCCccccCC---hhhHHHHHHHhc-CCCeEEEEECCccccccccccCcceeEEccCCCchhHH
Q 006872 500 FSYAIVVVGEQPYAETYGDSLNLTIS---EPGLSTITNVCG-AVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQG 575 (628)
Q Consensus 500 ~D~~iv~vg~~~~~e~~gd~~~l~l~---~~~~~li~~v~~-~~~~VvV~~~g~P~~l~~~~~~v~ail~a~~~g~~g~a 575 (628)
+|++||++|+.++.|.+|||.+|.|| +.|.+||+++++ ++|+|||+++|+|+.+.+|.++++|||++|+||++|.|
T Consensus 480 aDv~Iv~~Ge~~~~e~~gDr~~L~lp~g~~~q~~Li~av~a~g~pvVvVl~sGrP~~l~~~~~~~~Ail~aw~pG~eGgA 559 (822)
T 3rrx_A 480 PDVAIVVIGEEPYAEWFGDIELLEFQHETKHALALLKQLKADNIPVVTVFLSGRPLWVNKELNASDAFVAAWLPGSEGEG 559 (822)
T ss_dssp CSEEEEEEECCCCCGGGGCCSCCBTTTTTCHHHHHHHHHHHTTCCEEEEEECSSCCBCHHHHHTCSEEEEEECCCSBTHH
T ss_pred CCeEEEEecCCcccccCCCcccccCCCCChHHHHHHHHHHHhCCCEEEEEeCCcceeccchhhhCCeEEEcCCCCchhHH
Confidence 99999999999988888899999999 578999999987 89999999999999999999999999999999999669
Q ss_pred HHHHHhcCC------CCCccccccccccCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 006872 576 VADVLFGDY------GFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPTK 626 (628)
Q Consensus 576 ~advL~G~~------~PsGkLPvt~p~~~~~~p~~~g~~~~~~~~pFG~GLsYt~~~ 626 (628)
|||||||++ |||||||+|||++.+|+|.++++..|+|+||||||||||+|+
T Consensus 560 iAdVLfG~v~g~~~~nPSGkLP~T~P~~~~q~P~~~~~~~~~PlypFG~GLSYt~f~ 616 (822)
T 3rrx_A 560 VADVLLTNKQGKTQFDFTGKLSFSWPKYDDQFTLNLNDADYDPLFAYGYGLTYQDNI 616 (822)
T ss_dssp HHHHHBBCTTSCBSCCCCCCCSSCBCSSTTCTTCCTTCSSCCCSBCTTCCBCTTCCC
T ss_pred HHHHHhcccccccccCCCCCCceeccCCcccCCcccCCCCCccccCCCCCcCCCCCc
Confidence 999999997 999999999999999999999999999999999999999997
No 3
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=1.4e-112 Score=964.06 Aligned_cols=528 Identities=21% Similarity=0.334 Sum_probs=443.3
Q ss_pred CCCHHHHHHHHHhhCCHHHHHhcccccccC------------C-----CchHHHhhcccceEEeCCCCCCCCCCCHHHHH
Q 006872 32 KQPLGARIRDLMSRMTLAEKIGQMTQIERA------------V-----ATPDVMKQFFIGSVLSGGGSVPAPKATAETWV 94 (628)
Q Consensus 32 ~~~~~~rv~~ll~~mtleeKigQl~~~~~~------------~-----~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~ 94 (628)
+.+.++||++|+++||||||||||++++.. . ...+.++++++|||++++ .|..+++|++
T Consensus 28 ~~~~~~rv~~ll~~MTleEKiGQl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vGgvil~~----~n~~~~~q~~ 103 (642)
T 3bmx_A 28 ASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFA----ENVKTTKQTV 103 (642)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHTEECBCSEECCTTCSSCEECCSCCHHHHHHHHHHCCSEEECCG----GGCSSHHHHH
T ss_pred cCCHHHHHHHHHHcCCHHHHHhCceeecccccccccccccCCCCCCcHHHHHHHHhCCCcEEEECC----CCCCCHHHHH
Confidence 467899999999999999999999987543 1 124578899999999984 4667899999
Q ss_pred HHHHHHHHhhhccCCCCCcEEEecCCCCcccCC-CCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccc
Q 006872 95 NMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVY-KATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAV 173 (628)
Q Consensus 95 ~~~~~lq~~~~~~~~giP~~i~~D~e~G~~~~~-~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv 173 (628)
++++.+|+. +++||+++++|+|||.+.+. ..|.||+++++|||||+++++++|+++|+|+|++|||++|||++||
T Consensus 104 ~l~~~lq~~----~~~iPlli~~D~e~G~v~r~~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aPvvDv 179 (642)
T 3bmx_A 104 QLTDDYQKA----SPKIPLMLSIDQEGGIVTRLGEGTNFPGNMALGAARSRINAYQTGSIIGKELSALGINTDFSPVVDI 179 (642)
T ss_dssp HHHHHHHHH----CSSSCCEEEECCCBTTBCCCSSSCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHTCCEECCCBCCC
T ss_pred HHHHHHHHH----hcCCCcEEEEcCCCCceecCCCCCCCCCHHHHHhhCCHHHHHHHHHHHHHHHHHcCCCEEECCcccc
Confidence 999999972 46999999999999998763 3599999999999999999999999999999999999999999999
Q ss_pred cCCCCCCc-cccccCCCHHHHHHHHh-ccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCcc--CC
Q 006872 174 CRDPRWGR-CYESYSEDHKIVQAMTE-IIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTV--IN 249 (628)
Q Consensus 174 ~~~p~~gr-~~rsfgeDp~lv~~~a~-~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~--~~ 249 (628)
.|||+||| ++|||||||++|++|+. ||+|+| +.||++|+|||||||++..|+|...+. ++
T Consensus 180 ~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq----------------~~gV~a~~KHFpg~g~~~~dsh~~~~~~~~~ 243 (642)
T 3bmx_A 180 NNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQ----------------RQDIASALKHFPGHGDTDVDSHYGLPLVSHG 243 (642)
T ss_dssp CCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHH----------------HTTCEEEEEEETCCTTCSSCTTTSCCBCCCC
T ss_pred CCCCCCCcccccccCCCHHHHHHHHHHHHHHHH----------------hCCceEEeccccCCCCccCCCCCCCceeccC
Confidence 99999998 78999999999999997 999999 589999999999999999998876654 48
Q ss_pred HhHHHhhccHHHHHHHHcCcceEEEec---cccC-------------CccccCCHHHHHHHHHhhcCCCceeecchhhhh
Q 006872 250 LNGLLSIHMPAYYNSISKGVATVMVSY---SSWN-------------GKKMHANHELVTGFLKNKLKFRGFVISDWEGID 313 (628)
Q Consensus 250 ~~~l~~~~l~pF~~~i~~g~~~vM~sy---~~~~-------------g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~ 313 (628)
+++|++.||+||+++|++|+.+||||| +.+| |+|+|+|+++|+++||+||||+|+|||||++|+
T Consensus 244 ~~~l~e~~l~PF~~ai~ag~~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~m~ 323 (642)
T 3bmx_A 244 QERLREVELYPFQKAIDAGADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMK 323 (642)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEECSCTTSH
T ss_pred HHHHhhhhHHHHHHHHHcCCCEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEEeCchhhH
Confidence 999999999999999999999999995 5567 789999999999999999999999999999999
Q ss_pred hhcCCCCCChhHHHHHHHHcCCCeeccCC---------ChHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCC
Q 006872 314 RITAPPHANYSYSVQAGVSAGIDMVMVPN---------NYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDS 384 (628)
Q Consensus 314 ~~~~~~~~~~~~~~~~al~AG~D~~l~~~---------~~~~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~ 384 (628)
++...+ +..+++++|++||+||+|+|. +...+++.|.+||++|+++++|||+||+|||++|+++|+|++
T Consensus 324 ai~~~~--~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~gl~~~ 401 (642)
T 3bmx_A 324 AIADHF--GQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPA 401 (642)
T ss_dssp HHHTTS--CHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred HHHhcC--CHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHcCCCcC
Confidence 998754 346788999999999998873 234677899999999999999999999999999999999998
Q ss_pred -CCCCcc-----hhhccCCHHHHHHHHHHHHhhhhhhccCCCCCCCcccCCC-CCCeEEEEcccCCccCcccCCcEEeec
Q 006872 385 -PLADTS-----LVNELGSQEHRELAREAVRKSLVLLKNGEAADKPLLPLPK-KASKILVAGSHADNLGYQCGGWTITWQ 457 (628)
Q Consensus 385 -p~~~~~-----~~~~~~~~~~~~la~~~a~~sivLLKN~~~~e~~~LPL~~-~~~ki~vig~~a~~~~~~~g~~~~~~~ 457 (628)
|+.+.. ....+++++|+++++++|++||||||| ++++|||++ +.+||+|+|++++
T Consensus 402 ~p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN----~~~~LPL~~~~~~~iaviG~~~~-------------- 463 (642)
T 3bmx_A 402 RNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKN----EQHTLPFKPKKGSRILIVAPYEE-------------- 463 (642)
T ss_dssp CCCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEE----GGGCCSCCCCTTCEEEEEESSHH--------------
T ss_pred CCCcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEcc----CCCcCCCCCCCCCEEEEEeCCcc--------------
Confidence 876521 135688999999999999999999999 678999984 4679999998633
Q ss_pred CCCCCCCCCccCHHHHHhcccC---CCceE--EecCCC----ChhHHhhcCCceEEEEEeccCCccccCCCccccCChhh
Q 006872 458 GLGGNDLTAGSTILHAVSNTVD---PTTQV--VFNENP----DANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPG 528 (628)
Q Consensus 458 ~~~g~~~~~~~t~~~~l~~~~~---~~~~~--~~~~~~----~~~~~~~~~~D~~iv~vg~~~~~e~~gd~~~l~l~~~~ 528 (628)
...+++++|+++.+ ..... .+.... +.....++.+|++|++++...... ...+.+|..|
T Consensus 464 --------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~----~e~~~l~~~q 531 (642)
T 3bmx_A 464 --------QTASIEQTIHDLIKRKKIKPVSLSKMNFASQVFKTEHEKQVKEADYIITGSYVVKNDP----VVNDGVIDDT 531 (642)
T ss_dssp --------HHHHHHHHHHHHHHTTSSCCCEEEEEECTTCCCCHHHHHHHHHCSEEEEEECCSSCCC----CEETTEECCC
T ss_pred --------chhhHHHHHHHhhCCCCeeEEeccCCCCcchhhHHHHHHHHhhCCEEEEEecCCCCCc----hhccCCcccc
Confidence 12467888877641 11111 111111 112233567999999665431111 1134566667
Q ss_pred ------------HHHHHHHhc-CCCeEEEEECCccccccccccCcceeEEccCC--------Cch-hHHHHHHHhcCCCC
Q 006872 529 ------------LSTITNVCG-AVKCVVVVISGRPVVIQPYLAQIDALVAAWLP--------GTE-GQGVADVLFGDYGF 586 (628)
Q Consensus 529 ------------~~li~~v~~-~~~~VvV~~~g~P~~l~~~~~~v~ail~a~~~--------g~~-g~a~advL~G~~~P 586 (628)
.++|+++++ ++|+|| +.+|+||++. |+++++|||++|++ |++ ++|+||||||++||
T Consensus 532 ~~~~~~~~~~~~~~li~~~~~~~~pvVv-v~~g~P~~l~-~~~~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~nP 609 (642)
T 3bmx_A 532 ISDSSKWATVFPRAVMKAALQHNKPFVL-MSLRNPYDAA-NFEEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKP 609 (642)
T ss_dssp CCSSTTHHHHHHHHHHHHHHHTTCCEEE-EECSCGGGGG-GCTTCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSCC
T ss_pred ccccccccchhHHHHHHHHHHcCCCEEE-EecCChhccc-cccccCeEEEEccCcccccccccchHHHHHHHHHcCCCCC
Confidence 899999987 556555 5679999984 56779999999999 788 89999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 006872 587 TGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPTK 626 (628)
Q Consensus 587 sGkLPvt~p~~~~~~p~~~g~~~~~~~~pFG~GLsYt~~~ 626 (628)
+||||+|||++. .| .+|+||||||||||+|+
T Consensus 610 sGkLPvt~p~~~--~~-------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 610 KGTLPVDIPSVT--KP-------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp CCCCSSCEECSS--ST-------TSEEECTTCCBCTTTCS
T ss_pred CccCceeeeccC--CC-------CCcccCCCCCccCCCCC
Confidence 999999999877 22 26999999999999996
No 4
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=5.8e-112 Score=978.64 Aligned_cols=508 Identities=26% Similarity=0.403 Sum_probs=430.6
Q ss_pred HHHHHHHHhhCCHHHHHhcccccccCCCchHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCcEE
Q 006872 36 GARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIY 115 (628)
Q Consensus 36 ~~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~~~~giP~~i 115 (628)
+.|+++||++||||||++||...+.. .....+|++||+++
T Consensus 3 ~~r~~~ll~~mTleEKi~~l~g~~~~----------------------------------------~~~~~~rlgiP~l~ 42 (845)
T 3abz_A 3 KFDVEQLLSELNQDEKISLLSAVDFW----------------------------------------HTKKIERLGIPAVR 42 (845)
T ss_dssp CCCHHHHHHHCCHHHHHHHTBCSSSS----------------------------------------BCCCBGGGTBCCCB
T ss_pred HHHHHHHHHcCCHHHHHHHhcCCCcc----------------------------------------ccccCcccCCCCEE
Confidence 35799999999999999999642100 00123678999999
Q ss_pred EecCCCCcc-cC----CCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCccccccCCCH
Q 006872 116 GIDAVHGHN-NV----YKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDH 190 (628)
Q Consensus 116 ~~D~e~G~~-~~----~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~~rsfgeDp 190 (628)
++|+|||++ .+ .++|.||+++++|||||+++++++|+++|+|+|++|||++|||++||.|||+|||++|||||||
T Consensus 43 ~~D~~~G~~~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~Gi~~~laP~vdi~r~P~~gR~~EsfgeDP 122 (845)
T 3abz_A 43 VSDGPNGIRGTKFFDGVPSGCFPNGTGLASTFDRDLLETAGKLMAKESIAKNAAVILGPTTNMQRGPLGGRGFESFSEDP 122 (845)
T ss_dssp EEECTTSCCCSCSTTCCCBCCCCCHHHHHHTCCHHHHHHHHHHHHHHHHHTTCSEEECCBCCCCSSTTCTTGGGSCCSSH
T ss_pred EEecCCCeeeeeccCCCCcCcCcCHHHHHhcCCHHHHHHHHHHHHHHHHHcCCCEEecceECCCcCCCCCcccccCCCCH
Confidence 999999975 33 2479999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-ccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHHHHH-cC
Q 006872 191 KIVQAMTE-IIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSIS-KG 268 (628)
Q Consensus 191 ~lv~~~a~-~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~-~g 268 (628)
+++++|+. +|+|+| ++||++|+|||||||++. +++..+..+++++|++.||+||+++|+ +|
T Consensus 123 ~lv~~~a~a~v~GlQ----------------~~gV~a~~KHFpg~g~e~-~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag 185 (845)
T 3abz_A 123 YLAGMATSSVVKGMQ----------------GEGIAATVKHFVCNDLED-QRFSSNSIVSERALREIYLEPFRLAVKHAN 185 (845)
T ss_dssp HHHHHHHHHHHHHHH----------------HTTCBCEEEEETTCCCCT-TTTTCEEECCHHHHHHTTSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh----------------hCCeeEEeeccccCCccc-CCccccCCCCHHHHHHhhHHHHHHHHHhcC
Confidence 99999997 999999 579999999999999754 466666778999999999999999996 89
Q ss_pred cceEEEeccccCCccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChHHHH
Q 006872 269 VATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFI 348 (628)
Q Consensus 269 ~~~vM~sy~~~~g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~ 348 (628)
+.+||||||.+||+|+|+|+++|+++||+||||+|+|||||++|. ++++|++||+||+|.+.......
T Consensus 186 ~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------------~~~~Al~AG~D~~m~~~~~~~~~ 253 (845)
T 3abz_A 186 PVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY------------TTAAAIKNGLDIEFPGPTRWRTR 253 (845)
T ss_dssp CSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC------------CSHHHHHHTCCBBCSSSCSSCCH
T ss_pred CCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH------------HHHHHHHcCCCcccCCchhhhHH
Confidence 999999999999999999999999999999999999999998863 24799999999998743211122
Q ss_pred HHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHcC----CCCCCCCCcchhhccCCHHHHHHHHHHHHhhhhhhccCCCCCC
Q 006872 349 DDLTDQVKKNI-IPMSRIDDAVKRILRVKFVMG----LFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADK 423 (628)
Q Consensus 349 ~~l~~av~~g~-i~~~~id~av~Ril~~k~~~g----l~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~e~ 423 (628)
+.|.+||++|+ ++++|||+||+|||++|+++| +|++|+.++.. ..+++++|+++|+++|++||||||| ++
T Consensus 254 ~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~~p~~~~~~-~~~~~~~~~~la~~~a~~sivLLKN----~~ 328 (845)
T 3abz_A 254 ALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTGIVENGPES-TSNNTKETSDLLRKIAADSIVLLKN----KN 328 (845)
T ss_dssp HHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHCCCTTCCCC-CTTCSHHHHHHHHHHHHHHCEEEEE----CT
T ss_pred HHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCccccccCCccCccc-cccCCHHHHHHHHHHHHhCcEEecc----CC
Confidence 48999999999 999999999999999999999 99988754321 2478999999999999999999999 77
Q ss_pred CcccCCCCCCeEEEEcccCCccCcccCCcEEeecCCCCCCCCCccCHHHHHhcccCCC----------------------
Q 006872 424 PLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPT---------------------- 481 (628)
Q Consensus 424 ~~LPL~~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g~~~~~~~t~~~~l~~~~~~~---------------------- 481 (628)
++|||++ .+||+||||+++....++|++ +.....+..|++++|+++++..
T Consensus 329 ~~LPL~~-~~~iaviGp~A~~~~~~Gggs-------~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~ 400 (845)
T 3abz_A 329 NILPLKK-EDNIIVIGPNAKAKTSSGGGS-------ASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLI 400 (845)
T ss_dssp TCCSCCT-TSCEEEESTTTSCCCCSCBST-------TCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEES
T ss_pred cccCCCC-CCEEEEEcCCcchhhccCCCc-------cCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccc
Confidence 8999986 479999999999875433322 2222345677777776542100
Q ss_pred ------------------------c-------------------------------------------------------
Q 006872 482 ------------------------T------------------------------------------------------- 482 (628)
Q Consensus 482 ------------------------~------------------------------------------------------- 482 (628)
.
T Consensus 401 ~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 480 (845)
T 3abz_A 401 DAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQ 480 (845)
T ss_dssp STTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEE
T ss_pred cccccccCCCCceEEEEeccCcccCcccccceeeeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEe
Confidence 0
Q ss_pred -------------------------------------------------eEEecCC---------------------CCh
Q 006872 483 -------------------------------------------------QVVFNEN---------------------PDA 492 (628)
Q Consensus 483 -------------------------------------------------~~~~~~~---------------------~~~ 492 (628)
.+.|... .+.
T Consensus 481 ~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (845)
T 3abz_A 481 VYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDD 560 (845)
T ss_dssp EESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCH
T ss_pred ecCceEEEECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccc
Confidence 0001000 010
Q ss_pred -h-H----HhhcCCceEEEEEeccCCccccC-CCccccCChhhHHHHHHHhc-CCCeEEEEECCccccccccccCcceeE
Q 006872 493 -N-F----VKSNKFSYAIVVVGEQPYAETYG-DSLNLTISEPGLSTITNVCG-AVKCVVVVISGRPVVIQPYLAQIDALV 564 (628)
Q Consensus 493 -~-~----~~~~~~D~~iv~vg~~~~~e~~g-d~~~l~l~~~~~~li~~v~~-~~~~VvV~~~g~P~~l~~~~~~v~ail 564 (628)
. . ..++++|++||++|.++..|.+| ||.+|.||..|.+||++|++ ++|+|||+++|+|+.| +|+++++|||
T Consensus 561 ~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~~~~tVVVl~sG~pv~m-~w~~~v~AIL 639 (845)
T 3abz_A 561 DEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKANPNTVIVNQSGTPVEF-PWLEDANALV 639 (845)
T ss_dssp HHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHHCSCEEEEEECSSCCCC-TTGGGCSEEE
T ss_pred hhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHhCCCEEEEEeCCCcccC-cchhccCeEE
Confidence 1 1 22468999999999999888887 99999999999999999998 8999999999999999 8889999999
Q ss_pred EccCCCch-hHHHHHHHhcCCCCCccccccccccCCCCCCC-----------------CCCCCC-----CccccCCCCCC
Q 006872 565 AAWLPGTE-GQGVADVLFGDYGFTGKLARTWFKTVDQLPMN-----------------VGDPHY-----DPLFPFGFGLT 621 (628)
Q Consensus 565 ~a~~~g~~-g~a~advL~G~~~PsGkLPvt~p~~~~~~p~~-----------------~g~~~~-----~~~~pFG~GLs 621 (628)
++|+|||+ |+|+||||||++|||||||+|||++.+|+|.+ +||||| +|+||||||||
T Consensus 640 ~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~p~~~~d~P~~~~~~~~~g~~~y~eg~~vgYR~y~~~~~~plfPFG~GLS 719 (845)
T 3abz_A 640 QAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDNPAFLNFKTEFGRVIYGEDIFVGYRYYEKLQRKVAFPFGYGLS 719 (845)
T ss_dssp ECCCCCTTHHHHHHHHHTTSSCCCCCCSSCBCSSGGGSTTTTSCSCBTTEEECTTTTCCTHHHHHHHTCCCSBCTTCCBC
T ss_pred EcCCCcHHHHHHHHHHhcCCcCCCCCCceeeeCchhhCCccccCCCCCCceeccCCccCCCcchhcCCCceeecccCCCc
Confidence 99999999 99999999999999999999999999999974 246777 59999999999
Q ss_pred CCCCC
Q 006872 622 TKPTK 626 (628)
Q Consensus 622 Yt~~~ 626 (628)
||+|+
T Consensus 720 YTtF~ 724 (845)
T 3abz_A 720 YTTFE 724 (845)
T ss_dssp SSCEE
T ss_pred ceeEE
Confidence 99996
No 5
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=6.1e-111 Score=957.28 Aligned_cols=523 Identities=25% Similarity=0.377 Sum_probs=435.2
Q ss_pred HHHHHHHHHhhCCHHHHHhcccccccCCCchHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCcE
Q 006872 35 LGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMI 114 (628)
Q Consensus 35 ~~~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~~~~giP~~ 114 (628)
+++|+++|+++||+|||+++|...+... ++.. + .....+|+|||++
T Consensus 12 a~~ra~~l~~~lTl~EK~~l~~g~~~~~-----------~~~~---~--------------------~~~~i~rlgiP~~ 57 (713)
T 3zyz_A 12 AYDKAKAALAKLNLQDKVGIVSGVGWNG-----------GPCV---G--------------------NTSPASKISYPSL 57 (713)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHBBCCTTC-----------SSSS---E--------------------EBCCBGGGTBCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHhcCCCccc-----------Cccc---c--------------------ccCCcCCCCCceE
Confidence 8899999999999999999886432110 0000 0 0112478899999
Q ss_pred EEecCCCCcccCCCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeeccccc-ccCCCCCCccccccCCCHHHH
Q 006872 115 YGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIA-VCRDPRWGRCYESYSEDHKIV 193 (628)
Q Consensus 115 i~~D~e~G~~~~~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~D-v~~~p~~gr~~rsfgeDp~lv 193 (628)
+..|+++|+....++|.||+++++|||||+++++++|+++|+|+|++|+|++|||++| +.|||+|||++|+|||||+++
T Consensus 58 ~~~Dg~~G~r~~~~~T~fP~~~~laat~d~~l~~~~g~~~g~E~ra~Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~ 137 (713)
T 3zyz_A 58 CLQDGPLGVRYSTGSTAFTPGVQAASTWDVNLIRERGQFIGEEVKASGIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLT 137 (713)
T ss_dssp EEECCTTSCTTCSSCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHH
T ss_pred EEEecCceEECCCCCCcCcCHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCEEECCeecccCCCCCCCcccccccCCHHHH
Confidence 9999999986667789999999999999999999999999999999999999999999 889999999999999999999
Q ss_pred HHHHh-ccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHHHHHcCcceE
Q 006872 194 QAMTE-IIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATV 272 (628)
Q Consensus 194 ~~~a~-~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~~g~~~v 272 (628)
++|+. ||+|+| +.||++|+|||||||++..+ +.....+++++|+|.||+||+.+|++|+.+|
T Consensus 138 ~~~a~a~v~Glq----------------~~gV~a~~KHF~g~g~e~~r-~~~~~~v~~~~l~e~~l~pF~~ai~ag~~~V 200 (713)
T 3zyz_A 138 GIAMGQTINGIQ----------------SVGVQATAKHYILNEQELNR-ETISSNPDDRTLHELYTWPFADAVQANVASV 200 (713)
T ss_dssp HHHHHHHHHHHH----------------HTTCEEEEEEETTCCCSTTT-TTCEECCCHHHHHHTTTHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHh----------------hCCeEEEEecCccCCccccC-ccccCcCCHHHHHHhhhHHHHHHHHcCCCeE
Confidence 99997 999999 57999999999999986543 4445668999999999999999999999999
Q ss_pred EEeccccCCccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChH----HHH
Q 006872 273 MVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYK----EFI 348 (628)
Q Consensus 273 M~sy~~~~g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~----~~~ 348 (628)
|||||++||.|+|.|+++|+++||+||||+|+|||||+++. ++++|++||+||+|.+.++. .+.
T Consensus 201 M~syn~vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~------------~~~~ai~AG~D~~m~~~~~~~~~~~~~ 268 (713)
T 3zyz_A 201 MCSYNKVNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNAQH------------TTVQSANSGLDMSMPGTDFNGNNRLWG 268 (713)
T ss_dssp EECSSEETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTCCC------------CSHHHHHHTCCBBSSSSCTTSCCCCST
T ss_pred EeeccccCCccCcCCHHHHHHHHHHHcCCCEEEEecCccHH------------HHHHHHHcCCCEeCCCCcccchhHHHH
Confidence 99999999999999999999999999999999999999752 35799999999999776432 234
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhccCCHHHHHHHHHHHHhhhhhhccCCCCCCCcccC
Q 006872 349 DDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADKPLLPL 428 (628)
Q Consensus 349 ~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~e~~~LPL 428 (628)
+.|.+||++|+|+++|||+||+|||++|+++|+|++|++..... ...+++|+++++++|++||||||| ++++|||
T Consensus 269 ~~l~~av~~G~i~~~~id~av~RIL~~k~~lg~~~~~~~~~~~~-~~~~~~h~~la~~~a~~sivLLKN----~~~~LPL 343 (713)
T 3zyz_A 269 PALTNAVNSNQVPTSRVDDMVTRILAAWYLTGQDQAGYPSFNIS-RNVQGNHKTNVRAIARDGIVLLKN----DANILPL 343 (713)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTSTTCCCCCTT-SCCCTTTHHHHHHHHHHTCEEEEE----GGGCCSC
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCcccCCCCcccc-cccCHHHHHHHHHhhhcceEEEcc----CCCcccc
Confidence 78999999999999999999999999999999998776554322 224789999999999999999999 6789999
Q ss_pred CCCCCeEEEEcccCCccCc----------ccCCcEEeecCCCCC-CCCCccCHHHHHhcccC-CCceEEecCCCC--hhH
Q 006872 429 PKKASKILVAGSHADNLGY----------QCGGWTITWQGLGGN-DLTAGSTILHAVSNTVD-PTTQVVFNENPD--ANF 494 (628)
Q Consensus 429 ~~~~~ki~vig~~a~~~~~----------~~g~~~~~~~~~~g~-~~~~~~t~~~~l~~~~~-~~~~~~~~~~~~--~~~ 494 (628)
++. +||+|||++++.... .|...+....++++. ..++..|++++|++++. ....+.+..... ...
T Consensus 344 ~~~-~~IaViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~~~~~~~~a~ 422 (713)
T 3zyz_A 344 KKP-ASIAVVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLSNTDNTSSGA 422 (713)
T ss_dssp CCC-SEEEEESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEECSCCHHHHH
T ss_pred CCC-CEEEEECCCccccccccccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEeCCccHHHHH
Confidence 875 899999999975210 000001111122222 23466899999998763 344555543332 222
Q ss_pred HhhcCCceEEEEEeccCCcc------ccCCCccccCChhhHHHHHHHhc-CCCeEEEEECCcccccccccc--CcceeEE
Q 006872 495 VKSNKFSYAIVVVGEQPYAE------TYGDSLNLTISEPGLSTITNVCG-AVKCVVVVISGRPVVIQPYLA--QIDALVA 565 (628)
Q Consensus 495 ~~~~~~D~~iv~vg~~~~~e------~~gd~~~l~l~~~~~~li~~v~~-~~~~VvV~~~g~P~~l~~~~~--~v~ail~ 565 (628)
..++++|++|+++|..+... ..|||.+|.||..|.+||++|++ ++|+|||+++|+|+.+.+|.+ +++|||+
T Consensus 423 ~~A~~aDv~Iv~vg~~~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~~~~~VVVl~sG~p~~~~~w~~~~~v~Ail~ 502 (713)
T 3zyz_A 423 SAARGKDVAIVFITADSGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGANSNVIVVVHSVGAIILEQILALPQVKAVVW 502 (713)
T ss_dssp HHHTTCSEEEEEEEECCBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHHCSCEEEEEEESSCCCCHHHHTCTTEEEEEE
T ss_pred HHhhcCCEEEEEecccCCCCccccccCCCCcccccCChhHHHHHHHHHHhCCCeEEEEecCCcccchhhhhccccCEEEE
Confidence 34578999999998653211 12499999999999999999998 899999999999999988864 7999999
Q ss_pred ccCCCch-hHHHHHHHhcCCCCCccccccccccCCCCCCC--------------CCCCCC-----CccccCCCCCCCCCC
Q 006872 566 AWLPGTE-GQGVADVLFGDYGFTGKLARTWFKTVDQLPMN--------------VGDPHY-----DPLFPFGFGLTTKPT 625 (628)
Q Consensus 566 a~~~g~~-g~a~advL~G~~~PsGkLPvt~p~~~~~~p~~--------------~g~~~~-----~~~~pFG~GLsYt~~ 625 (628)
+|+||++ |+|+||||||++|||||||+|||++.+|+|.+ ++|||| +|+||||||||||+|
T Consensus 503 aw~pGqegG~AiAdvL~G~~nPSGkLP~T~p~~~~d~p~~~~~~~~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF 582 (713)
T 3zyz_A 503 AGLPSQESGNALVDVLWGDVSPSGKLVYTIAKSPNDYNTRIVSGGSDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKF 582 (713)
T ss_dssp CCCCGGGHHHHHHHHHTTSSCCCCCCSSCBCSCGGGSSCCCCCSSEECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCE
T ss_pred cCCCCchhhheehhhhcCCcCCCccCcceecCChhhCCCccccCCccccCCCCccCceeccCCCCceeecCCCCCCcccE
Confidence 9999999 99999999999999999999999999999853 346666 599999999999999
Q ss_pred C
Q 006872 626 K 626 (628)
Q Consensus 626 ~ 626 (628)
+
T Consensus 583 ~ 583 (713)
T 3zyz_A 583 N 583 (713)
T ss_dssp E
T ss_pred E
Confidence 6
No 6
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=5.7e-110 Score=954.94 Aligned_cols=516 Identities=26% Similarity=0.420 Sum_probs=428.7
Q ss_pred HHHHHHHhhCCHHHHHhcccccccCCCchHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCcEEE
Q 006872 37 ARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYG 116 (628)
Q Consensus 37 ~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~~~~giP~~i~ 116 (628)
+|+++|+++||||||++||...+...... .......|.+- .....+|+|||++++
T Consensus 2 ~r~~~ll~~mTleEK~~~l~g~~~~~~~g-~~~~~~~g~~g------------------------~~~~v~rlgiP~~~~ 56 (721)
T 2x41_A 2 EKVNEILSQLTLEEKVKLVVGVGLPGLFG-NPHSRVAGAAG------------------------ETHPVPRVGLPAFVL 56 (721)
T ss_dssp CHHHHHHHHCCHHHHHHHTBCCCSTTSTT-CCCCSSTTCSE------------------------ECCCBGGGTBCCCEE
T ss_pred hhHHHHHHcCCHHHHHHHhcCCCCCcccc-ccccccccccc------------------------cccCcccCCCCCEEE
Confidence 58999999999999999997643211100 00000000000 011246789999999
Q ss_pred ecCCCCccc---------CCCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCccccccC
Q 006872 117 IDAVHGHNN---------VYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYS 187 (628)
Q Consensus 117 ~D~e~G~~~---------~~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~~rsfg 187 (628)
+|++||++. ..++|.||+++++|||||+++++++|+++|+|+|++|||++|||++||.|||+|||++||||
T Consensus 57 ~D~~~G~~~~~~~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~~a~Gi~~~~aP~vdi~r~p~~gR~~e~fg 136 (721)
T 2x41_A 57 ADGPAGLRINPTRENDENTYYTTAFPVEIMLASTWNRELLEEVGKAMGEEVREYGVDVLLAPAMNIHRNPLCGRNFEYYS 136 (721)
T ss_dssp ECCTTSCCCCSCCTTCCCCCCCCCCCCHHHHHHTCCHHHHHHHHHHHHHHHHHTTCSEECCCBCCCCCSTTCTTGGGSCC
T ss_pred EcCCCCccccccccccccCCCcccCCCHHHHhhcCCHHHHHHHHHHHHHHHHHhCCCEEeeceECCCCCCCCCcccccCC
Confidence 999999863 34579999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHh-ccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHHHHH
Q 006872 188 EDHKIVQAMTE-IIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSIS 266 (628)
Q Consensus 188 eDp~lv~~~a~-~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~ 266 (628)
|||+++++|+. +|+|+| ++||++|+|||||||++. +++..+..++.++|++.||+||+++|+
T Consensus 137 eDP~l~~~~a~a~v~G~q----------------~~gV~a~~KHF~g~g~e~-~r~~~ds~~~~~~l~e~~l~pF~~ai~ 199 (721)
T 2x41_A 137 EDPVLSGEMASSFVKGVQ----------------SQGVGACIKHFVANNQET-NRMVVDTIVSERALREIYLRGFEIAVK 199 (721)
T ss_dssp SSHHHHHHHHHHHHHHHH----------------TTTCBCEEEEETTCCCCT-TTTTCEEECCHHHHHHTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhh----------------hCCeEEEecccccCCCCC-CCCcccCCCCHHHHHhhhHHHHHHHHH
Confidence 99999999997 999999 589999999999999654 445556668999999999999999998
Q ss_pred -cCcceEEEeccccCCccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChH
Q 006872 267 -KGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYK 345 (628)
Q Consensus 267 -~g~~~vM~sy~~~~g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~ 345 (628)
+|+.+|||||+.+||.|+|+|+++|+++||+||||+|+|||||+++. ++++|++||+||+|.+....
T Consensus 200 ~a~~~~vM~sy~~i~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------------~~~~al~AG~D~~m~~~~~~ 267 (721)
T 2x41_A 200 KSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGD------------NPVEQLKAGNDLIMPGKAYQ 267 (721)
T ss_dssp HHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEEECTTCSS------------CHHHHHHHTCCBBCSCCGGG
T ss_pred hcCCCEEEecCCCCCCccccCCHHHHHHHHHHhcCCCEEEEccCchHH------------HHHHHHHcCCCcccCCCccc
Confidence 89999999999999999999999999999999999999999998763 36899999999998654321
Q ss_pred ------HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhccCCHHHHHHHHHHHHhhhhhhccCC
Q 006872 346 ------EFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGE 419 (628)
Q Consensus 346 ------~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~ 419 (628)
.+++.|.+||++|.|+++|||+||+|||++|+++|+|++|+.. ..+++++|+++|+++|++|||||||
T Consensus 268 ~~~~~~~~~~~l~~av~~G~i~~~~id~av~Ril~~k~~~gl~~~~~~~----~~~~~~~h~~la~~~A~esiVLLKN-- 341 (721)
T 2x41_A 268 VNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYRYS----NKPDLEKHAKVAYEAGAEGVVLLRN-- 341 (721)
T ss_dssp TCTTCCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSGGGGTCCCC----SCCCHHHHHHHHHHHHHHHCEEEEE--
T ss_pred ccchhHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhCCCCCCCcc----cccCCHHHHHHHHHHHHhchhhhcC--
Confidence 2458999999999999999999999999999999999987532 3467899999999999999999999
Q ss_pred CCCCCcccCCCCCCeEEEEcccCCccCcccCCcEEeecCCCCCCCCCccCHHHHHhcc-cCC--CceEEec---------
Q 006872 420 AADKPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNT-VDP--TTQVVFN--------- 487 (628)
Q Consensus 420 ~~e~~~LPL~~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g~~~~~~~t~~~~l~~~-~~~--~~~~~~~--------- 487 (628)
++ +|||++. +||+|+|++++.....+++ +......+..+++++|+++ +.. ...+.|.
T Consensus 342 --~~-~LPL~~~-~kIaviG~~A~~~~~~g~g-------s~~~~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~ 410 (721)
T 2x41_A 342 --EE-ALPLSEN-SKIALFGTGQIETIKGGTG-------SGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRET 410 (721)
T ss_dssp --SS-CCSCCTT-CCEEEESGGGTSCCCSCBS-------TTCCCCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHS
T ss_pred --CC-cCCCCCC-CEEEEEecCCcCccccCCC-------CCCcCcCCCCCHHHHHHHhccCCCCceEEEEeecccccccc
Confidence 66 9999875 8999999999876433222 1111224567999999987 532 1122222
Q ss_pred ----CC-----------C-------ChhHHhhcCCceEEEEEeccCCccccC-CCc----cccCChhhHHHHHHHh----
Q 006872 488 ----EN-----------P-------DANFVKSNKFSYAIVVVGEQPYAETYG-DSL----NLTISEPGLSTITNVC---- 536 (628)
Q Consensus 488 ----~~-----------~-------~~~~~~~~~~D~~iv~vg~~~~~e~~g-d~~----~l~l~~~~~~li~~v~---- 536 (628)
.+ . +.....++.+|++||++|.. +.++ ||. ++.||..|.+||++++
T Consensus 411 ~~~~~G~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~ 487 (721)
T 2x41_A 411 EEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFH 487 (721)
T ss_dssp TTTSCBC-----CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHH
T ss_pred cccCCCccceeccccCCCchhhhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCHHHHHHHHHHHHHHH
Confidence 11 0 11122346799999999987 2333 898 9999999999999998
Q ss_pred c-CCCeEEEEECCccccccccccCcceeEEccCCCch-hHHHHHHHhcCCCCCccccccccccCCCCCCC----------
Q 006872 537 G-AVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTE-GQGVADVLFGDYGFTGKLARTWFKTVDQLPMN---------- 604 (628)
Q Consensus 537 ~-~~~~VvV~~~g~P~~l~~~~~~v~ail~a~~~g~~-g~a~advL~G~~~PsGkLPvt~p~~~~~~p~~---------- 604 (628)
+ ++|+|||+++|+|+++.+|.++++|||++|+||++ ++|+||||||++|||||||+|||++.+|+|.+
T Consensus 488 ~~~~~vVVVl~~g~P~~l~~~~~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~p~~~~~~p~~~~~~~~~~~~ 567 (721)
T 2x41_A 488 EQGKKVIVLLNIGSPVEVVSWRDLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTFPRDYSDVPSWTFPGEPKDNP 567 (721)
T ss_dssp HTTCCEEEEEECSSCCCCTTTGGGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCEESSGGGCSCTTTTCBSTTSC
T ss_pred HhCCCEEEEEecCCceEccchhhcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceeecCccccCccccCCCCCcccc
Confidence 6 78899999999999998899999999999999999 89999999999999999999999999998861
Q ss_pred ----------CCCCCC-----CccccCCCCCCCCCCC
Q 006872 605 ----------VGDPHY-----DPLFPFGFGLTTKPTK 626 (628)
Q Consensus 605 ----------~g~~~~-----~~~~pFG~GLsYt~~~ 626 (628)
+||||| +|+||||||||||+|+
T Consensus 568 ~~~~y~eg~~vgYry~d~~~~~plypFG~GLSYTtF~ 604 (721)
T 2x41_A 568 QKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYTTFE 604 (721)
T ss_dssp SEEECTTTTCCTHHHHHHHTCCEEECTTCCBCSSCEE
T ss_pred ccccccCCcccccceeecCCCceeeccCCCCCcceeE
Confidence 256676 4999999999999996
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=1.6e-87 Score=732.85 Aligned_cols=470 Identities=20% Similarity=0.243 Sum_probs=385.1
Q ss_pred hhCCHHHHHhcccccccCCC-----------------chHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 006872 44 SRMTLAEKIGQMTQIERAVA-----------------TPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALS 106 (628)
Q Consensus 44 ~~mtleeKigQl~~~~~~~~-----------------~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~ 106 (628)
++||+|||||||+++...+. ..+++++ ++||||++++ +++|++++++.+|+.+
T Consensus 13 ~~MtLeeKiGQL~~v~~~g~~~~~~~~~~~~~~~~~~~~~li~~-~vGGvilf~~-------~~~q~~~l~~~lQ~~a-- 82 (535)
T 3sql_A 13 ESLSLRQAIAQMIVVRGAGYLFDYERPYPQWEADQTTLQRWIEA-GIGGVILLGG-------SAAEVAQKTKQLQSWA-- 82 (535)
T ss_dssp GGSCHHHHHHHTEEEEEESSSSGGGCSCTTTSCCHHHHHHHHHT-TCCEEEEECS-------CHHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHhhCceEeccccccccccccccccccCHHHHHHHHHh-CCCEEEEeCC-------CHHHHHHHHHHHHHHc--
Confidence 89999999999998753221 1246777 9999999853 5799999999999886
Q ss_pred cCCCCCcEEEecCCCCcccC-CCCcCCCccccccccCCH------HHHHHHHHHHHHHHHHcCCCeeecccccccCCCCC
Q 006872 107 TRLGIPMIYGIDAVHGHNNV-YKATIFPHNVGLGVTRDP------ALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRW 179 (628)
Q Consensus 107 ~~~giP~~i~~D~e~G~~~~-~~~t~fP~~~~laat~d~------~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~ 179 (628)
+||++|++|+|||.+.+ .++|.||+++++|+|||. ++++++|+++|+|+|++|||++||||+||.|||+|
T Consensus 83 ---giPlli~~D~egG~v~rl~~~T~fP~~~alaat~~~d~~~~~~La~~~G~~~a~Elra~Gin~~fAPvvDv~r~P~~ 159 (535)
T 3sql_A 83 ---EIPLLIAADIEEGVGQRFRGATEFPPPMAFGEIWRTDPHQAIALAETMGATTAQEALSLGINWVLAPVLDVNNNPHN 159 (535)
T ss_dssp ---SSCCEEEECCSSCHHHHSTTSCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEECCCBCCCCCCTTC
T ss_pred ---CCCeEEEeccCCCceeecCCCCCCCCHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHhCCCEEecCeeccCCCCCC
Confidence 89999999999998755 468999999999999954 68999999999999999999999999999999999
Q ss_pred Cc-cccccCCCHHHHHHHHh-ccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCcc--CCHhHHHh
Q 006872 180 GR-CYESYSEDHKIVQAMTE-IIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTV--INLNGLLS 255 (628)
Q Consensus 180 gr-~~rsfgeDp~lv~~~a~-~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~--~~~~~l~~ 255 (628)
|| ++|||||||++|++|+. ||+|+| +.||++|+|||||||++..|+|...+. .++++|++
T Consensus 160 g~ig~rsfGEDP~lv~~~a~A~v~GlQ----------------~~gV~a~~KHFpG~G~~~~Dsh~~~~~v~~s~~~L~e 223 (535)
T 3sql_A 160 PVINIRAFGETPDQVSALGTAFIRGAQ----------------QYAVLTTAKHFPGHGDTATDSHLALPTISHDDTRLNT 223 (535)
T ss_dssp SSSGGGSSCSSHHHHHHHHHHHHHHHT----------------TSSCBCEEEEETCCCSCSCCTTTSCCBCCCCHHHHHH
T ss_pred CCccccCCCCCHHHHHHHHHHHHHHHh----------------hcccceeeeeecccCCcccCCccCCCcCCCCHHHHHH
Confidence 95 89999999999999997 999999 579999999999999999999877665 48999999
Q ss_pred hccHHHHHHHHcCcceEEEeccccCC----ccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHH
Q 006872 256 IHMPAYYNSISKGVATVMVSYSSWNG----KKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGV 331 (628)
Q Consensus 256 ~~l~pF~~~i~~g~~~vM~sy~~~~g----~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al 331 (628)
.||+||+++|++|+.+|||||+.+++ .|+|+|+++|+++||+||||+|+|||||++|+++...++ ..+++++|+
T Consensus 224 ~~L~PF~~aI~ag~~sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~~~--~~eaa~~Al 301 (535)
T 3sql_A 224 VELPPFKAAIQGGVDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQFAA--PDTVVVQAI 301 (535)
T ss_dssp TTSHHHHHHHHTTCSEEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTTSC--HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhcCC--HHHHHHHHH
Confidence 99999999999999999999988764 799999999999999999999999999999999987653 467889999
Q ss_pred HcCCCeeccCCChHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhccCCHHHHHHHHHHHHhh
Q 006872 332 SAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKS 411 (628)
Q Consensus 332 ~AG~D~~l~~~~~~~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~s 411 (628)
+||+||+|+|.+...+++.|.+||++|+++++|||+||+|||++|+++|+|++|.... ...+++++|+++|+++|++|
T Consensus 302 ~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~~~~~~~--~~~~~~~eh~~lA~e~A~eS 379 (535)
T 3sql_A 302 AAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTATPSTFPQ--GISGDRPETRKTVAMVLERA 379 (535)
T ss_dssp HHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSCCCCTTT--TCCTTCHHHHHHHHHHHHHH
T ss_pred HCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCccch--hhccCCHHHHHHHHHHHHhC
Confidence 9999999999888788899999999999999999999999999999999998764432 24788999999999999999
Q ss_pred hhhhccCCCCCCCcccCC-----CCCCeEEEEcccCCccCcccCCcEEeecCCCCCCCCCccCHHHHHhcccCCCceEEe
Q 006872 412 LVLLKNGEAADKPLLPLP-----KKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVF 486 (628)
Q Consensus 412 ivLLKN~~~~e~~~LPL~-----~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g~~~~~~~t~~~~l~~~~~~~~~~~~ 486 (628)
||| + ++|||+ ++.++|+|||++++...+.+++ . ...++ ++ .+..+.+
T Consensus 380 iVL--~------~~LPL~~~~~~~~~~~laVIG~~a~~~~~~g~~----------~---~~~~P----~~---~G~~~~~ 431 (535)
T 3sql_A 380 TKH--Q------KSLVKISSFPDNFARNLIVVDSVLKSPFLRPNC----------P---AIAIP----QR---HGYAAEI 431 (535)
T ss_dssp CEE--C------SSCCCCCCCSTTSEEEEEEESCGGGCTTCCTTC----------H---HHHHH----HT---TTEEEEE
T ss_pred eEE--C------CcCCCCcccccCCCCEEEEECCCCCCcccCCCC----------C---cccCH----HH---cCceEEE
Confidence 999 5 289998 2357899999998764321111 0 11111 11 1233333
Q ss_pred cCCCChhHHh-hcCCceEEEEEeccCCccccCCCccccCChhhHHHHHHHhcCCCeEEEEECCccccccccccCcceeEE
Q 006872 487 NENPDANFVK-SNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVA 565 (628)
Q Consensus 487 ~~~~~~~~~~-~~~~D~~iv~vg~~~~~e~~gd~~~l~l~~~~~~li~~v~~~~~~VvV~~~g~P~~l~~~~~~v~ail~ 565 (628)
.+........ ....-..-+++..+++....+ ...++++.+.+....--+++.|+||.++++.+..+.|-+
T Consensus 432 ~~~~~~~~~~~~~~~~~~q~f~r~~~f~~~~~---------~~~~~~~~l~~~~~~~~~~~yg~py~~~~~~~~~~~~p~ 502 (535)
T 3sql_A 432 VELKTLPRLQLEAIPTLIQCFLRGNPFTEKLA---------DPIDVLQKIAAQIPLQGVIFYGSPYFLEALQTTLPEIPW 502 (535)
T ss_dssp EETTTGGGBCCCSSCEEEEEEECCCSSCSSCC---------CCHHHHHHHHHHSCEEEEEEEECCTTHHHHHHHCTTSCE
T ss_pred EcCccccccccCCCCeEEEEeecCCCCCCCcc---------hHHHHHHHHHhcCceeEEEEeCChhHHHHHHHHhhcCCc
Confidence 2221111110 112235668888888876554 246788888775566666777999999776556668999
Q ss_pred ccCCCch--hHHHH-HHHhcC
Q 006872 566 AWLPGTE--GQGVA-DVLFGD 583 (628)
Q Consensus 566 a~~~g~~--g~a~a-dvL~G~ 583 (628)
+|+|||. .|++| ..||+.
T Consensus 503 ~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 503 WFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp EEESCCSHHHHHHHHHHTCSS
T ss_pred ccCCccCHHHHHHHHHHHhcc
Confidence 9999996 67655 566663
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=8.6e-75 Score=606.08 Aligned_cols=311 Identities=19% Similarity=0.276 Sum_probs=267.8
Q ss_pred HHHHhcccccccCCC-----chHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCcEEEecCCCCc
Q 006872 49 AEKIGQMTQIERAVA-----TPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGH 123 (628)
Q Consensus 49 eeKigQl~~~~~~~~-----~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~~~~giP~~i~~D~e~G~ 123 (628)
+||||||++++..+. ..++++++++||||+|+ +|..+++|++++++.+|+.. ++|++|++|+|||.
T Consensus 15 ~~kiGQl~m~g~~g~~~~~~~~~~i~~~~vGGvilf~----~n~~~~~q~~~l~~~lq~~~-----~iPlli~~D~egG~ 85 (351)
T 3tev_A 15 PVRPGQLLMIDLPGPELDKDTAAYLREHGIGAVCLFG----KNVESAEQLRRLCADLREVM-----GEHALIAIDHEGGA 85 (351)
T ss_dssp CCCGGGGEEECCSSSSCCHHHHHHHHHHTCCEEEECG----GGCSCHHHHHHHHHHHHHHH-----CTTCEEEECC----
T ss_pred hhhcccEEEEecCCCCCCHHHHHHHHcCCceEEEEeC----CCCCCHHHHHHHHHHHHHHh-----CCCCceeEeCCCCe
Confidence 589999999976543 34688999999999995 45678999999999999876 89999999999999
Q ss_pred ccC-CCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCcc-ccccCCCHHHHHHHHh-cc
Q 006872 124 NNV-YKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRC-YESYSEDHKIVQAMTE-II 200 (628)
Q Consensus 124 ~~~-~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~-~rsfgeDp~lv~~~a~-~v 200 (628)
+.+ ..+|.||+++++|+|||+++++++|+.+|+|+|++|||++||||+||.|||+|||. .|||||||++|++|+. ||
T Consensus 86 v~r~~~~t~~P~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aPv~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v 165 (351)
T 3tev_A 86 ITRPEFWPFAPSAMSLGAADDQQLTEDVNAALARQLRSVGINWNFTPVLDINVNPANPVIGDRAYGSDAARVTRHGRAAL 165 (351)
T ss_dssp ---------CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHTCCEECCCBCCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHH
T ss_pred EeCCCCCCCCCCHHHHHhcCCHHHHHHHHHHHHHHHHHcCCCEeccceeEeccCCCCCcccccCCCCCHHHHHHHHHHHH
Confidence 765 45789999999999999999999999999999999999999999999999999995 6899999999999997 99
Q ss_pred ccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCcc--CCHhHHHhhccHHHHHHHHcCcceEEEe---
Q 006872 201 PGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTV--INLNGLLSIHMPAYYNSISKGVATVMVS--- 275 (628)
Q Consensus 201 ~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~--~~~~~l~~~~l~pF~~~i~~g~~~vM~s--- 275 (628)
+|+| +.||++|+|||||||++..|+|...+. +++++|++.||+||+++ ++|+.+||||
T Consensus 166 ~Glq----------------~~gV~a~~KHFpG~g~~~~dsh~~~~~~~~s~~~L~e~~l~PF~~a-~ag~~~VM~aHi~ 228 (351)
T 3tev_A 166 AGHT----------------REGVAPCAKHFPGHGDTHQDSHLALPRVSKSRAELDAGELAPFRAL-LPETPAIMTAHIV 228 (351)
T ss_dssp HHHH----------------TTTCEECEEEETCCTTCBCSSTTSCCEECCCHHHHHHTTTHHHHHH-GGGCSEEEECSCE
T ss_pred HHHH----------------HcCCeEEeeeccCCCCCcCCCCcCCCcCCCCHHHHHHhhhHHHHHH-hcCCCEEEecceE
Confidence 9999 589999999999999999999887654 58999999999999999 9999999999
Q ss_pred ccccCC-ccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChH---HHHHHH
Q 006872 276 YSSWNG-KKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYK---EFIDDL 351 (628)
Q Consensus 276 y~~~~g-~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~---~~~~~l 351 (628)
|+.+|+ .|+|+|+++|+++||+||||+|+|||||++|+++...++ ..+++++|++|||||+|.|.+.. .+++.|
T Consensus 229 y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~~~--~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l 306 (351)
T 3tev_A 229 YDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDANYG--RGEAAVRALRAGADLVMALGRREVQQATLAAV 306 (351)
T ss_dssp ETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHHSC--HHHHHHHHHHHTCSBEECCSSHHHHHHHHHHH
T ss_pred ecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhcCC--HHHHHHHHHHcCCCEECCCCChhHHHHHHHHH
Confidence 677888 699999999999999999999999999999999987554 36788999999999999887653 467889
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcc
Q 006872 352 TDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTS 390 (628)
Q Consensus 352 ~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~ 390 (628)
.++|++ +++|||+||+|||++|+++|+|++||.++.
T Consensus 307 ~~av~~---~~~~id~av~RIL~~k~~~g~f~~Py~~~~ 342 (351)
T 3tev_A 307 AEYVPE---NQAAVATKRERLRALARRFPAQADETLDPQ 342 (351)
T ss_dssp HHHGGG---CHHHHHHHHHHHHHHHHHSCCCC-------
T ss_pred HHHHhC---cHHHHHHHHHHHHHHHHHhCCCCCCCCChh
Confidence 999998 899999999999999999999999998764
No 9
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=6.5e-64 Score=522.20 Aligned_cols=279 Identities=20% Similarity=0.272 Sum_probs=247.9
Q ss_pred hHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCcEEEecCCCCcccC--CCCcCCCccccccccC
Q 006872 65 PDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNV--YKATIFPHNVGLGVTR 142 (628)
Q Consensus 65 ~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~~~~giP~~i~~D~e~G~~~~--~~~t~fP~~~~laat~ 142 (628)
.++|+++++||||+|+ +|..+++|++++++.+|+.+ ++|++|++|+|||.++| .++|.||+++++|+||
T Consensus 18 ~~~i~~~~vGGvilf~----rN~~~~~q~~~l~~~lq~~~-----~iPlli~vD~egG~v~r~~~g~t~fP~~~~lgat~ 88 (349)
T 4gvf_A 18 REILAHPLVGGLILFT----RNYHDPEQLRELVRQIRAAS-----RNHLVVAVDQEGGRVQRFREGFTRLPAAQSFFALH 88 (349)
T ss_dssp HHHHTCTTEEEEEECG----GGCSCHHHHHHHHHHHHHHC-----SSCCEEEECEEETTEESCCTTSCCCCCHHHHHHHH
T ss_pred HHHHHcCCceEEEEeC----CCCCCHHHHHHHHHHHHHhc-----CCCceeeecCCCceeeccCCCCCCCccHHHHHHhc
Confidence 4678999999999994 56679999999999999886 79999999999999876 4689999999999999
Q ss_pred CH----HHHHHHHHHHHHHHHHcCCCeeecccccccC-CCCCCccccccCCCHHHHHHHHh-ccccccCCCCCCCCCCCc
Q 006872 143 DP----ALVKKIGDATALEVRATGIPYVFAPCIAVCR-DPRWGRCYESYSEDHKIVQAMTE-IIPGLQGDLPANSKKGVP 216 (628)
Q Consensus 143 d~----~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~-~p~~gr~~rsfgeDp~lv~~~a~-~v~G~q~~~~~~~~~~~~ 216 (628)
|+ ++++++|+.+|+|+|++|||++||||+||.+ +|.|| .|||||||++|++|+. ||+|+|
T Consensus 89 d~~~~~~la~~~g~~~a~Elra~Gin~~faPv~Dv~r~~~~ig--~rsfgeDP~lv~~~a~a~v~Glq------------ 154 (349)
T 4gvf_A 89 GLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVGHISAAIG--ERSYHADPAKALAMATRFIDGMH------------ 154 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCEECCCBCCCCSCCTTTG--GGSSCSSHHHHHHHHHHHHHHHH------------
T ss_pred CcchHHHHHHHHHHHHHHHHHHcCCCEEecCcccCCCCCCCCc--CcCCCCCHHHHHHHHHHHHHHHH------------
Confidence 98 8999999999999999999999999999998 57766 8999999999999997 999999
Q ss_pred cccCCCceeeeecccccCCCCCCCCCCCCcc--CCHhHHHhhccHHHHHHHHcC-cceEEEe---ccccCCccccCCHHH
Q 006872 217 FVAGKKKVAACAKHYVGDGGTTKGINENNTV--INLNGLLSIHMPAYYNSISKG-VATVMVS---YSSWNGKKMHANHEL 290 (628)
Q Consensus 217 ~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~--~~~~~l~~~~l~pF~~~i~~g-~~~vM~s---y~~~~g~pa~~s~~~ 290 (628)
+.||++|+|||||||++..|+|...++ .+.++|++.||+||+.+|++| +.+|||| |+.+|+.|+|+|+++
T Consensus 155 ----~~GV~a~~KHFpG~G~~~~dsh~~~~v~~~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~l 230 (349)
T 4gvf_A 155 ----DAGMKTTGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYW 230 (349)
T ss_dssp ----HHTCCCEEEEETCCTTCCCCSSSSCCBCCCCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHH
T ss_pred ----HcCceeeecccccCCCcccCCCCCCCCCCcCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHH
Confidence 589999999999999999999987665 378999999999999999999 9999999 888999999999999
Q ss_pred HHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 006872 291 VTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVK 370 (628)
Q Consensus 291 l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~av~~g~i~~~~id~av~ 370 (628)
|+++||+||||+|+|||||++|.++... .++.+++++|++|||||+|+|+++... ..+.+++.. ++++|+++.+.
T Consensus 231 l~~lLR~elGF~G~VvSD~l~m~~~~~~--~~~~eaa~~Al~AG~Dm~l~~~~~~~~-~~~l~al~~--~~~~r~~~~~~ 305 (349)
T 4gvf_A 231 LKTVLRQELGFDGVIFSDDLSMEGAAIM--GSYAERAQASLDAGCDMILVCNNRKGA-VSVLDNLSP--IKAERVTRLYH 305 (349)
T ss_dssp HCCCCCCCTCCCSEEEEEEGGGCCCGGG--CCHHHHHHHHHHHTCSEEEECSCHHHH-HHHHHHSCC--CCCGGGGGGCC
T ss_pred HHHHHHHhcCCCEEEEecCCcccccccc--CCHHHHHHHHHHcCCCEEcCCCCHHHH-HHHHHHhhh--ccHHHHHHHhh
Confidence 9999999999999999999999876532 245678899999999999999887543 456666653 67788877766
Q ss_pred HHHHH
Q 006872 371 RILRV 375 (628)
Q Consensus 371 Ril~~ 375 (628)
|++.-
T Consensus 306 r~~~~ 310 (349)
T 4gvf_A 306 KGSFS 310 (349)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 65433
No 10
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=5.9e-63 Score=514.54 Aligned_cols=277 Identities=17% Similarity=0.276 Sum_probs=248.4
Q ss_pred hHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCcEEEecCCCCcccCC--CCcCCCccccccccC
Q 006872 65 PDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVY--KATIFPHNVGLGVTR 142 (628)
Q Consensus 65 ~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~~~~giP~~i~~D~e~G~~~~~--~~t~fP~~~~laat~ 142 (628)
.+.++++++||||+|+ +|..+++|++++++.+|+.+ ++|++|++|+|||.+++. ++|.||+++++|+ |
T Consensus 18 ~~~i~~~~vGGvilf~----rn~~~~~q~~~l~~~lq~~~-----~iPlli~~D~egG~v~r~~~~~t~fP~~~~laa-~ 87 (340)
T 2oxn_A 18 REILQHPTVGGVILFG----RNYHDNQQLLALNKAIRQAA-----KRPILIGVDQEGGRVQRFREGFSRIPPAQYYAR-A 87 (340)
T ss_dssp HHHHTSTTEEEEEECG----GGCSCHHHHHHHHHHHHHHH-----SSCCEEEECEEETTEESCCTTSCCCCCGGGGGG-S
T ss_pred HHHHhcCCCcEEEEeC----CCCCCHHHHHHHHHHHHHHc-----CCCeEeeecCCCeeEeccCCCCCCCCCHHHHhC-C
Confidence 4678899999999994 56779999999999999876 899999999999998764 6899999999999 9
Q ss_pred C--HHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCccccccCCCHHHHHHHHh-ccccccCCCCCCCCCCCcccc
Q 006872 143 D--PALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTE-IIPGLQGDLPANSKKGVPFVA 219 (628)
Q Consensus 143 d--~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~~rsfgeDp~lv~~~a~-~v~G~q~~~~~~~~~~~~~~~ 219 (628)
| +++++++|+++|+|+|++|||++||||+||.|+ .+.++.|||||||++|++|+. +|+|+|
T Consensus 88 d~~~~la~~~g~~~a~E~ra~Gi~~~~aPv~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq--------------- 151 (340)
T 2oxn_A 88 ENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMK--------------- 151 (340)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTTCCEECCCBCCCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHH---------------
T ss_pred CcHHHHHHHHHHHHHHHHHHhCCCEEecCccCCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHH---------------
Confidence 9 999999999999999999999999999999998 666778999999999999997 999999
Q ss_pred CCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHHHHHcC-cceEEEe---ccccCCccccCCHHHHHHHH
Q 006872 220 GKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKG-VATVMVS---YSSWNGKKMHANHELVTGFL 295 (628)
Q Consensus 220 g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~~g-~~~vM~s---y~~~~g~pa~~s~~~l~~lL 295 (628)
+.||++|+|||||||++..|+|...+..+.++| +.||+||+++|++| +.+|||| |+.+|+.|+|+|+++|+++|
T Consensus 152 -~~gV~a~~KHFpG~G~~~~dsh~~~~v~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lL 229 (340)
T 2oxn_A 152 -AVGMATTGKHFPGHGAVIADSHLETPYDERETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVL 229 (340)
T ss_dssp -HTTCCCEEEEETCCTTCCSCCSSSSCBCCCSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCC
T ss_pred -HCCceeeeccCcCCCCccCCCCCCCccCCHHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHh
Confidence 589999999999999999999988776666889 99999999999999 9999999 88889999999999999999
Q ss_pred HhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 006872 296 KNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILR 374 (628)
Q Consensus 296 R~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~av~~g~i~~~~id~av~Ril~ 374 (628)
|+||||+|+|||||+.|+++... .+..+++++|++|||||+|.|+++. ....+.++++ .++++|+++.+.|+..
T Consensus 230 R~elGF~G~VvSD~l~m~~~~~~--~~~~ea~~~Al~AG~Dm~l~~~~~~-~~~~~~~av~--~~~~~Rl~~~~~~~~~ 303 (340)
T 2oxn_A 230 REELGFKGIVFSDDLSMEGAAVM--GGPVERSHQALVAGCDMILICNKRE-AAVEVLDNLP--IMEVPQAEALLKKQQF 303 (340)
T ss_dssp CCCTCCCSEEEEEEGGGSCHHHH--CSHHHHHHHHHHHTCSEEECCSCHH-HHHHHHHHSC--CCCCGGGGGGSCSCCC
T ss_pred hcccCCCeEEEcccchhhhhhcc--CCHHHHHHHHHHcCCCEEcCCCCHH-HHHHHHHHHH--HhhHHHHHHHhhcccc
Confidence 99999999999999999876532 2446788999999999999998765 4457777873 4889999988776553
No 11
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=1.8e-62 Score=511.76 Aligned_cols=278 Identities=20% Similarity=0.284 Sum_probs=242.5
Q ss_pred hHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCcEEEecCCCCcccC---CCCcCCCcccccccc
Q 006872 65 PDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNV---YKATIFPHNVGLGVT 141 (628)
Q Consensus 65 ~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~~~~giP~~i~~D~e~G~~~~---~~~t~fP~~~~laat 141 (628)
.++|+++++||||+|. +|..+++|++++++.+|+. ++|++|++|+|||.+.+ .++|.||+++++|++
T Consensus 28 ~~~i~~~~vGGvilf~----~n~~~~~ql~~l~~~i~~~------~iPlli~vD~EgG~v~r~~~~g~t~fP~~~~laat 97 (348)
T 4g6c_A 28 ARRLAHPNTGGVILFA----RHFQNRAQLTALTDSIRAV------REDILIAVDHEGGRVQRFRTDGFTVLPAMRRLGEL 97 (348)
T ss_dssp HHHHHSTTEEEEEECG----GGCSCHHHHHHHHHHHHHH------CTTCEEEECEEETTEESCCSTTCCCCCCHHHHHHH
T ss_pred HHHHHcCCceEEEEcC----CCCCCHHHHHHHHHHHHHh------CCCceEEecCCCCceecCCCCCCCCCCCHHHHHHh
Confidence 4688999999999994 5667899999999999975 49999999999999876 357999999999999
Q ss_pred CCH------HHHHHHHHHHHHHHHHcCCCeeeccccccc--CCCCCCccccccCCCHHHHHHHHh-ccccccCCCCCCCC
Q 006872 142 RDP------ALVKKIGDATALEVRATGIPYVFAPCIAVC--RDPRWGRCYESYSEDHKIVQAMTE-IIPGLQGDLPANSK 212 (628)
Q Consensus 142 ~d~------~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~--~~p~~gr~~rsfgeDp~lv~~~a~-~v~G~q~~~~~~~~ 212 (628)
||+ ++++++|+.+|+|+|++|||++||||+||. |+|.+| .|||||||++|++|+. ||+|+|
T Consensus 98 ~d~d~~~~~~la~~~g~~~a~El~a~Gi~~~~aPv~Dv~~gr~~~iG--~rsfgeDP~lv~~~a~A~v~Glq-------- 167 (348)
T 4g6c_A 98 WDRDVLLATKVATAVGYILAAELRACGIDMSFTPVLDLDYGHSKVIG--DRAFHRDPRVVTLLAKSLNHGLS-------- 167 (348)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCCSCCTTTG--GGSCCSSHHHHHHHHHHHHHHHH--------
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHcCCCEeecCccCCCCCCCCCcc--CcCCCCCHHHHHHHHHHHHHHHH--------
Confidence 997 799999999999999999999999999998 444444 7999999999999997 999999
Q ss_pred CCCccccCCCceeeeecccccCCCCCCCCCCCCcc--CCHhHHHhhccHHHHHHHHcCcceEEEe---ccccCCccccCC
Q 006872 213 KGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTV--INLNGLLSIHMPAYYNSISKGVATVMVS---YSSWNGKKMHAN 287 (628)
Q Consensus 213 ~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~--~~~~~l~~~~l~pF~~~i~~g~~~vM~s---y~~~~g~pa~~s 287 (628)
+.||++|+|||||||++..|+|...+. .+.++|++.||+||+.+ ++|+.+||+| |+.+|+.|+|+|
T Consensus 168 --------~~GV~a~~KHFpG~G~~~~dsh~~~~v~~~~~~el~~~~l~PF~~a-~ag~~~VM~aHv~y~~id~~Pa~~S 238 (348)
T 4g6c_A 168 --------LAGMANCGKHFPGHGFAEADSHVALPTDDRTLDAILEQDVAPYDWL-GLSLAAVIPAHVIYTQVDKRPAGFS 238 (348)
T ss_dssp --------HTTCCCCEEEETCSSSCCC----CCCEECCCHHHHHHTTSHHHHHH-GGGCCEEEECSCEETTTCSSCGGGC
T ss_pred --------hcCCceeeCCCCCCCCccCCCCCCCCcCCCCHHHHHHHHHHHHHHH-hcCCCeEEecceeecCCCCccccCC
Confidence 589999999999999999999876654 37889999999999999 9999999999 888999999999
Q ss_pred HHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChHHHHHHHHHHHHcCCCCHHHHHH
Q 006872 288 HELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDD 367 (628)
Q Consensus 288 ~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~av~~g~i~~~~id~ 367 (628)
+++|+++||+||||+|+|||||++|.++... .+..+++++|++|||||+|+|++.. ....+.++++. +++++
T Consensus 239 ~~ll~~lLR~elGF~G~VvSD~l~m~~~~~~--~~~~e~a~~Al~AG~Dm~l~~~~~~-~~~~~~~al~~-----~~~~~ 310 (348)
T 4g6c_A 239 RVWLQDILRGKLGFTGAIFSDDLSMEAAREG--GTLTQAADAALAAGCDMVLVCNQPD-AAEVVLNGLKA-----RASAE 310 (348)
T ss_dssp HHHHCCCCCCCSCCCSEEEEEETTCGGGGTT--CCHHHHHHHHHHHTCSEEECCSCHH-HHHHHHHHCCC-------CHH
T ss_pred HHHHHHHHhhccCCCeEEEccCCchhhhhhc--CCHHHHHHHHHHcCCCEECCCCChH-HHHHHHHHhhc-----ccchH
Confidence 9999999999999999999999999988653 3456788999999999999998754 55677777753 56799
Q ss_pred HHHHHHHHHHHc
Q 006872 368 AVKRILRVKFVM 379 (628)
Q Consensus 368 av~Ril~~k~~~ 379 (628)
+++||++++.|.
T Consensus 311 ~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 311 SVRRIKRMRARG 322 (348)
T ss_dssp HHHHHHTTSCCS
T ss_pred HHHHHHHHHhcc
Confidence 999999998763
No 12
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=62.65 E-value=15 Score=35.03 Aligned_cols=58 Identities=19% Similarity=0.281 Sum_probs=45.0
Q ss_pred HHHHHHcCcceEEEeccccCCccccCCHHHHHHHHHhhc--CCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCee
Q 006872 261 YYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKL--KFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMV 338 (628)
Q Consensus 261 F~~~i~~g~~~vM~sy~~~~g~pa~~s~~~l~~lLR~el--gf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~ 338 (628)
++.++++|+..|++ .++++.++..-.+..+ .|+|.++.++... ..+.+|+++|+|++
T Consensus 78 a~~ai~AGA~fivs---------P~~~~evi~~~~~~~v~~~~~~~~~PG~~Tp------------tE~~~A~~~Gad~v 136 (217)
T 3lab_A 78 FQKAIDAGAQFIVS---------PGLTPELIEKAKQVKLDGQWQGVFLPGVATA------------SEVMIAAQAGITQL 136 (217)
T ss_dssp HHHHHHHTCSEEEE---------SSCCHHHHHHHHHHHHHCSCCCEEEEEECSH------------HHHHHHHHTTCCEE
T ss_pred HHHHHHcCCCEEEe---------CCCcHHHHHHHHHcCCCccCCCeEeCCCCCH------------HHHHHHHHcCCCEE
Confidence 57899999999987 2368888866666656 6889999887653 34678999999998
Q ss_pred c
Q 006872 339 M 339 (628)
Q Consensus 339 l 339 (628)
-
T Consensus 137 K 137 (217)
T 3lab_A 137 K 137 (217)
T ss_dssp E
T ss_pred E
Confidence 4
No 13
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=41.35 E-value=78 Score=30.87 Aligned_cols=84 Identities=12% Similarity=0.110 Sum_probs=51.3
Q ss_pred HHHHHcCcceEEEeccccC-CccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeecc
Q 006872 262 YNSISKGVATVMVSYSSWN-GKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMV 340 (628)
Q Consensus 262 ~~~i~~g~~~vM~sy~~~~-g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~ 340 (628)
+++.+.|+..||.-...+. |.. -.+..+| ..++++.+-. ||.|.. |.. .+.+.++++.|+|=+++
T Consensus 150 krl~~~G~~aVmPlg~pIGsG~G-i~~~~lI-~~I~e~~~vP--VI~eGG----I~T------PsDAa~AmeLGAdgVlV 215 (265)
T 1wv2_A 150 RQLAEIGCIAVMPLAGLIGSGLG-ICNPYNL-RIILEEAKVP--VLVDAG----VGT------ASDAAIAMELGCEAVLM 215 (265)
T ss_dssp HHHHHSCCSEEEECSSSTTCCCC-CSCHHHH-HHHHHHCSSC--BEEESC----CCS------HHHHHHHHHHTCSEEEE
T ss_pred HHHHHhCCCEEEeCCccCCCCCC-cCCHHHH-HHHHhcCCCC--EEEeCC----CCC------HHHHHHHHHcCCCEEEE
Confidence 4556789999999443332 221 1357777 4556654433 444432 221 45678999999999987
Q ss_pred CC------ChHHHHHHHHHHHHcCC
Q 006872 341 PN------NYKEFIDDLTDQVKKNI 359 (628)
Q Consensus 341 ~~------~~~~~~~~l~~av~~g~ 359 (628)
.+ ++.....++.+|++.|+
T Consensus 216 gSAI~~a~dP~~ma~af~~Av~aGr 240 (265)
T 1wv2_A 216 NTAIAHAKDPVMMAEAMKHAIVAGR 240 (265)
T ss_dssp SHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred ChHHhCCCCHHHHHHHHHHHHHHHH
Confidence 43 34555667777776554
No 14
>1gng_X Frattide, glycogen synthase kinase-3 beta; transferase, protein kinase, GSK3/frattide complex, phosphorylated, active; HET: PTR; 2.6A {Homo sapiens}
Probab=35.28 E-value=27 Score=23.13 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=17.8
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHH
Q 006872 348 IDDLTDQVKKNIIPMSRIDDAVKRIL 373 (628)
Q Consensus 348 ~~~l~~av~~g~i~~~~id~av~Ril 373 (628)
++.|.+.+.+|.+ |.+||+|+-
T Consensus 13 ~~lLQ~Llr~G~L----IkEAVrRlq 34 (39)
T 1gng_X 13 HRLLQQLVLSGNL----IKEAVRRLH 34 (39)
T ss_dssp HHHHHHHHHHTCH----HHHHHHHHH
T ss_pred HHHHHHHHHhCcH----HHHHHHHHH
Confidence 4567888889987 899999974
No 15
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=24.42 E-value=45 Score=20.79 Aligned_cols=18 Identities=33% Similarity=0.418 Sum_probs=14.6
Q ss_pred hhhHHHHHHHHHhhhccc
Q 006872 5 SVPMLGFLLLCFLAAVTE 22 (628)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (628)
-+.++|+|++|.+|.+.+
T Consensus 9 wlai~c~LLfs~Ls~vkA 26 (30)
T 1z65_A 9 WVAILCMLLASHLSTVKA 26 (30)
T ss_dssp HHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHhhHHHHHh
Confidence 467889999999988764
Done!