Query 006876
Match_columns 627
No_of_seqs 204 out of 1760
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 11:17:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 5.5E-64 1.9E-68 548.2 16.5 299 1-623 105-422 (427)
2 3qb0_A Actin-related protein 4 100.0 2.8E-63 9.7E-68 550.0 18.9 289 1-622 95-497 (498)
3 4fo0_A Actin-related protein 8 100.0 8.5E-60 2.9E-64 532.7 17.1 143 1-150 177-328 (593)
4 1k8k_B ARP2, actin-like protei 100.0 5.4E-58 1.8E-62 495.4 14.2 290 1-620 85-388 (394)
5 2fxu_A Alpha-actin-1, actin, a 100.0 4.9E-57 1.7E-61 484.3 20.7 293 1-623 82-375 (375)
6 1k8k_A ARP3, actin-like protei 100.0 1.4E-54 4.9E-59 470.6 17.7 298 1-623 89-413 (418)
7 4am6_A Actin-like protein ARP8 100.0 2.6E-51 8.9E-56 459.6 12.0 140 1-147 199-350 (655)
8 1jce_A ROD shape-determining p 99.8 3.5E-21 1.2E-25 202.8 11.2 141 1-147 76-216 (344)
9 3h1q_A Ethanolamine utilizatio 99.5 1.3E-13 4.3E-18 140.0 11.8 120 2-142 74-197 (272)
10 1dkg_D Molecular chaperone DNA 99.4 1.3E-13 4.6E-18 146.8 7.9 101 20-121 135-243 (383)
11 2v7y_A Chaperone protein DNAK; 99.4 4.2E-13 1.4E-17 149.3 6.2 118 2-120 87-211 (509)
12 3qfu_A 78 kDa glucose-regulate 99.2 1.2E-11 4E-16 131.8 7.3 100 20-120 153-256 (394)
13 3i33_A Heat shock-related 70 k 99.0 2.6E-10 8.7E-15 122.2 7.0 99 20-119 158-263 (404)
14 1yuw_A Heat shock cognate 71 k 98.8 5.8E-09 2E-13 117.2 9.6 98 21-119 140-242 (554)
15 2kho_A Heat shock protein 70; 98.8 2E-08 7E-13 114.0 11.9 99 21-120 136-242 (605)
16 3d2f_A Heat shock protein homo 98.6 3.7E-08 1.3E-12 113.2 9.1 99 21-120 139-247 (675)
17 2ych_A Competence protein PILM 98.5 8.9E-08 3.1E-12 101.5 6.7 98 36-145 153-252 (377)
18 4gni_A Putative heat shock pro 98.4 1.4E-06 4.9E-11 93.4 12.2 100 20-120 150-255 (409)
19 4a2a_A Cell division protein F 98.2 4.1E-06 1.4E-10 91.0 10.4 101 32-144 166-266 (419)
20 4b9q_A Chaperone protein DNAK; 98.1 1.1E-05 3.6E-10 91.6 10.9 106 10-120 129-242 (605)
21 2fsj_A Hypothetical protein TA 97.3 0.00052 1.8E-08 72.3 9.1 102 20-121 119-240 (346)
22 3js6_A Uncharacterized PARM pr 96.5 0.0041 1.4E-07 65.8 7.3 102 21-122 114-233 (355)
23 2zgy_A Plasmid segregation pro 96.3 0.0037 1.3E-07 64.7 5.7 92 45-140 136-229 (320)
24 4apw_A ALP12; actin-like prote 95.9 0.0056 1.9E-07 64.0 4.7 99 21-120 106-219 (329)
25 4ehu_A Activator of 2-hydroxyi 93.8 0.014 4.7E-07 58.8 0.7 65 518-595 188-252 (276)
26 2d0o_A DIOL dehydratase-reacti 91.4 0.76 2.6E-05 51.2 10.3 98 37-145 371-468 (610)
27 1nbw_A Glycerol dehydratase re 91.2 0.45 1.5E-05 53.1 8.3 79 56-145 392-470 (607)
28 2ews_A Pantothenate kinase; PA 82.8 0.26 8.7E-06 50.7 0.1 71 518-595 215-286 (287)
29 3cet_A Conserved archaeal prot 77.7 1.2 4.1E-05 46.7 3.1 25 73-97 127-151 (334)
30 1t6c_A Exopolyphosphatase; alp 67.4 13 0.00043 38.3 8.0 80 32-114 95-177 (315)
31 3cer_A Possible exopolyphospha 65.9 9.7 0.00033 39.7 6.8 80 34-114 102-191 (343)
32 2zgy_A Plasmid segregation pro 65.8 1.4 4.6E-05 45.2 0.2 47 542-595 273-319 (320)
33 2i7n_A Pantothenate kinase 1; 63.3 3.2 0.00011 43.9 2.6 75 517-595 283-358 (360)
34 4apw_A ALP12; actin-like prote 62.1 1.2 4E-05 46.2 -1.1 47 540-596 277-323 (329)
35 1hux_A Activator of (R)-2-hydr 59.8 1.3 4.5E-05 44.5 -1.1 48 542-597 209-256 (270)
36 3mdq_A Exopolyphosphatase; str 56.5 9.7 0.00033 39.2 4.7 78 34-114 89-170 (315)
37 1u6z_A Exopolyphosphatase; alp 49.2 33 0.0011 37.7 7.8 78 34-114 96-176 (513)
38 1nbw_A Glycerol dehydratase re 47.6 4.1 0.00014 45.5 0.2 44 543-591 552-600 (607)
39 2d0o_A DIOL dehydratase-reacti 43.4 4.1 0.00014 45.5 -0.7 44 543-591 550-598 (610)
40 3hi0_A Putative exopolyphospha 43.2 48 0.0016 36.3 7.9 76 34-113 100-178 (508)
41 1saz_A Probable butyrate kinas 41.1 8.9 0.0003 40.4 1.5 73 543-621 297-377 (381)
42 2fsj_A Hypothetical protein TA 37.2 4.3 0.00015 42.2 -1.7 47 541-596 296-343 (346)
43 3js6_A Uncharacterized PARM pr 34.8 2.1 7.2E-05 44.9 -4.5 45 540-596 289-335 (355)
44 3aap_A Ectonucleoside triphosp 34.2 22 0.00075 37.2 3.2 76 32-108 85-177 (353)
45 4htl_A Beta-glucoside kinase; 33.9 17 0.00058 36.6 2.2 51 543-595 239-289 (297)
46 2gup_A ROK family protein; sug 33.2 9.9 0.00034 37.9 0.3 54 38-97 86-142 (292)
47 4db3_A Glcnac kinase, N-acetyl 32.3 19 0.00065 36.8 2.3 53 543-595 271-324 (327)
48 2aa4_A Mannac kinase, putative 32.0 11 0.00038 37.4 0.4 52 543-595 235-286 (289)
49 2l2l_B Methyl-CPG-binding doma 31.9 68 0.0023 22.5 4.3 25 182-206 7-31 (36)
50 3htv_A D-allose kinase, alloki 29.9 21 0.00074 36.1 2.2 63 543-605 241-307 (310)
51 3vov_A Glucokinase, hexokinase 27.5 19 0.00063 36.4 1.2 53 543-595 239-293 (302)
52 2yhx_A Hexokinase B; transfera 27.2 38 0.0013 36.8 3.6 52 543-597 385-442 (457)
53 2gup_A ROK family protein; sug 26.3 81 0.0028 31.1 5.7 53 543-595 229-285 (292)
54 2hoe_A N-acetylglucosamine kin 25.9 26 0.00089 36.5 2.0 53 543-595 316-369 (380)
55 2qm1_A Glucokinase; alpha-beta 23.2 17 0.00059 36.5 0.0 51 545-595 266-319 (326)
56 3r8e_A Hypothetical sugar kina 22.6 20 0.0007 36.3 0.4 53 543-595 262-317 (321)
57 3epq_A Putative fructokinase; 20.2 36 0.0012 34.4 1.7 53 543-595 226-287 (302)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-64 Score=548.18 Aligned_cols=299 Identities=27% Similarity=0.432 Sum_probs=253.7
Q ss_pred CHHHHHHHH-hhcCCCCCCCcccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccC---ccCcceE
Q 006876 1 MEYILDFAF-DRLGANGSEIDHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYG---ICNKDGL 76 (627)
Q Consensus 1 mE~iwd~if-~~L~v~~~p~d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~---~~~~tGL 76 (627)
||.||+|+| ++|+++ |.+||||||||+++|+..|++++|+|||+|+||+++++.+++||+|++|... ...+|||
T Consensus 105 ~e~iw~~~~~~~L~v~--~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tgl 182 (427)
T 3dwl_A 105 MERFWQQSLFKYLRCE--PEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGT 182 (427)
T ss_dssp HHHHHHHHHHTTSCCC--GGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEE
T ss_pred HHHHHHHHHhHhhCCC--CcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEE
Confidence 689999998 579999 7899999999999999999999999999999999999999999999998110 0147999
Q ss_pred EEecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCCCCCCcccHHHHHHHHHhccccccCHHHHHHHhh
Q 006876 77 AICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQ 156 (627)
Q Consensus 77 VVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~~~~~~~~~~~ve~IKE~~CyVa~Dy~~E~~~~~ 156 (627)
|||+|++.|+|+||++|+++.++++++++||+++|+||.++|..+++. ..+.+++++|||++|||+.||.+|++.+.
T Consensus 183 VVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~ 259 (427)
T 3dwl_A 183 VVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEFSRFD 259 (427)
T ss_dssp EEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHHHHHHCCCCSCHHHHHHHTT
T ss_pred EEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999998876 34678999999999999999998876432
Q ss_pred cCchhhhhccccccCCCCCCCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHhhhhHH
Q 006876 157 KGTKEAEHKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEEN 236 (627)
Q Consensus 157 ~~~~~~~~~~~~~qlP~~~~~~~~~~s~ee~~~~~~~r~~~~~rl~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~ 236 (627)
.. +
T Consensus 260 ~~-----------------------~------------------------------------------------------ 262 (427)
T 3dwl_A 260 RE-----------------------P------------------------------------------------------ 262 (427)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cC-----------------------c------------------------------------------------------
Confidence 20 0
Q ss_pred HHHHhhhhcCCCcHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhcccCCCCCcccCCCcccCHHHHHHHHHHhhhhcc
Q 006876 237 DIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTT 316 (627)
Q Consensus 237 ~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~L~~ipd~~l~~eq~kekr~q~~~k~~ 316 (627)
. ....|.| +-||
T Consensus 263 ---------------------------------------------~--~~~~~~l-~~~~-------------------- 274 (427)
T 3dwl_A 263 ---------------------------------------------D--RYLKYAS-ESIT-------------------- 274 (427)
T ss_dssp --------------------------------------------------CCBCC-------------------------
T ss_pred ---------------------------------------------c--ccceeEe-eCCC--------------------
Confidence 0 0011211 0011
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccccc
Q 006876 317 TEGRQRAKQKRVEEELEQEKKNQEEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLN 396 (627)
Q Consensus 317 ~~~r~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~r~s 396 (627)
T Consensus 275 -------------------------------------------------------------------------------- 274 (427)
T 3dwl_A 275 -------------------------------------------------------------------------------- 274 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhhhhccCCCCCCCCCCCchhhHHHHhhcCCCCCCchHhhHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCc
Q 006876 397 AAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQS 476 (627)
Q Consensus 397 ~~~~~rm~~~~~~~~~~~~~~d~fg~~d~~w~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~dp~f~~~~~~~~~~~ 476 (627)
T Consensus 275 -------------------------------------------------------------------------------- 274 (427)
T 3dwl_A 275 -------------------------------------------------------------------------------- 274 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcCCCCCCCcEEEcCcccccccccCcCCCCCCCC-CCCccHHHHHhcccCCCCChhhHHhccCCeEEecCCCCCc
Q 006876 477 AAEIPRVRPLTKEDFQIVLGVERFRCPEILFRPNWVGID-QVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFP 555 (627)
Q Consensus 477 ~~~~~~~~~~~~~~~~I~lg~Erf~~pE~LF~Psl~g~~-~~gL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~s~ip 555 (627)
...+.|.++.|||+|||+||+|+++|.+ ..||+++|.+||++ ||+|+|+.|++|||||||+|+||
T Consensus 275 -----------g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~---c~~dlr~~L~~nIvLtGG~sl~~ 340 (427)
T 3dwl_A 275 -----------GHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQS---SPIDVRKGLYKNIVLSGGSTLFK 340 (427)
T ss_dssp ----------------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHT---SCHHHHHHHHHCEEEESGGGCST
T ss_pred -----------CCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHh---CCHHHHHHHhCCEEEEccCcCCC
Confidence 0124788999999999999999999999 58999999999995 69999999999999999999999
Q ss_pred ChHHHHHHHHHhhc--------------CCCCCeeEeeCCCCccceeeccccccCcCCCCcccccHHHHhhhChhHHHHh
Q 006876 556 GMSERLEAGIRMIR--------------PCGAPIKVVRALDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGENWLRRY 621 (627)
Q Consensus 556 Gf~eRL~~EL~~l~--------------p~~~~v~V~~~~~~~~saW~GgsilAsl~~f~~~~ITk~eY~E~G~~iv~~k 621 (627)
||.+||++||+.++ |..++|+|+++++|.|++|+||||||++++|+++||||+||+|+|++|||+|
T Consensus 341 G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~ 420 (427)
T 3dwl_A 341 NFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRY 420 (427)
T ss_dssp TTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCC
T ss_pred ChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccchhheeEEHHHHhhhChHhheec
Confidence 99999999999987 5677899999999999999999999999999999999999999999999998
Q ss_pred cc
Q 006876 622 QL 623 (627)
Q Consensus 622 ~~ 623 (627)
++
T Consensus 421 ~~ 422 (427)
T 3dwl_A 421 QI 422 (427)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-63 Score=549.98 Aligned_cols=289 Identities=24% Similarity=0.338 Sum_probs=253.7
Q ss_pred CHHHHHHHHh-hcCCCCCCCcc-cEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceEEE
Q 006876 1 MEYILDFAFD-RLGANGSEIDH-PVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAI 78 (627)
Q Consensus 1 mE~iwd~if~-~L~v~~~p~d~-pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGLVV 78 (627)
||.||+|+|. .|+++ |.+| |||||+|+++|...|++|+|+|||.|+||+++++.+++||+||+| .+|||||
T Consensus 95 ~E~iw~~~f~~~L~v~--p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G-----~~tglVV 167 (498)
T 3qb0_A 95 AQEQWQWALQNELYLN--SNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAG-----RPNCLVV 167 (498)
T ss_dssp HHHHHHHHHHHTSCCS--CCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHT-----CSSEEEE
T ss_pred HHHHHHHHHHhhhCCC--cccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcC-----CCeEEEE
Confidence 6899999995 69999 7899 999999999999999999999999999999999999999999999 8999999
Q ss_pred ecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccC------------------CCCCCc------c-cHHH
Q 006876 79 CPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKH------------------PQHMTK------L-TWEK 133 (627)
Q Consensus 79 DiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~------------------~~~~~~------~-~~~~ 133 (627)
|+|++.|+|+||++|+++.+++.++++||+++|+||.++|..++ +.+... . +.++
T Consensus 168 DiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~i 247 (498)
T 3qb0_A 168 DIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGF 247 (498)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTH
T ss_pred EcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998642 222111 1 3458
Q ss_pred HHHHHHhccccccC--HHHHHHHhhcCchhhhhccccccCCCCCCCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 006876 134 VEDLKMEHCYIAPD--YFSEAQLFQKGTKEAEHKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSS 211 (627)
Q Consensus 134 ve~IKE~~CyVa~D--y~~E~~~~~~~~~~~~~~~~~~qlP~~~~~~~~~~s~ee~~~~~~~r~~~~~rl~~~~~~~~~~ 211 (627)
+++|||++|||+.| |..+......
T Consensus 248 v~~iKE~~c~Va~~~~~~~~~~~~~~------------------------------------------------------ 273 (498)
T 3qb0_A 248 FQECKETLCHICPTKTLEETKTELSS------------------------------------------------------ 273 (498)
T ss_dssp HHHHHHHTCCCCSSCHHHHHHHHHHT------------------------------------------------------
T ss_pred HHHHHHhhEEecCCccHhHHhhhccC------------------------------------------------------
Confidence 99999999999987 3332210000
Q ss_pred HHHHHHHHHhhHHHHHHHHhhhhHHHHHHhhhhcCCCcHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhcccCCCCCc
Q 006876 212 RINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPL 291 (627)
Q Consensus 212 ~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~L 291 (627)
.....|.|
T Consensus 274 ------------------------------------------------------------------------~~~~~yeL 281 (498)
T 3qb0_A 274 ------------------------------------------------------------------------TAKRSIES 281 (498)
T ss_dssp ------------------------------------------------------------------------CCCEEEEC
T ss_pred ------------------------------------------------------------------------cCceEEEC
Confidence 00112322
Q ss_pred ccCCCcccCHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHhHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Q 006876 292 IHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELEQEKKNQEEEERRLENPELYVEQMRAKYKELSEKIDQRK 371 (627)
Q Consensus 292 ~~ipd~~l~~eq~kekr~q~~~k~~~~~r~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~ 371 (627)
|
T Consensus 282 ---P---------------------------------------------------------------------------- 282 (498)
T 3qb0_A 282 ---P---------------------------------------------------------------------------- 282 (498)
T ss_dssp ---S----------------------------------------------------------------------------
T ss_pred ---C----------------------------------------------------------------------------
Confidence 2
Q ss_pred HHhhcCCCCCCCCCCCCCCCcccccHHHHHHHHhhhhhhccCCCCCCCCCCCchhhHHHHhhcCCCCCCchHhhHHHHHH
Q 006876 372 RLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSRDNDDDDEEMDENEAEL 451 (627)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~r~s~~~~~rm~~~~~~~~~~~~~~d~fg~~d~~w~~y~~~~~~~~~~~~~~~~~~~~l 451 (627)
T Consensus 283 -------------------------------------------------------------------------------- 282 (498)
T 3qb0_A 283 -------------------------------------------------------------------------------- 282 (498)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhcCCCCCCCCCCCCCCccccCCCcCCCCCCCcEEEcCcc-cccccccCcCCCCCCC----------------
Q 006876 452 ARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKEDFQIVLGVE-RFRCPEILFRPNWVGI---------------- 514 (627)
Q Consensus 452 ~~~~~~l~~~dp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~I~lg~E-rf~~pE~LF~Psl~g~---------------- 514 (627)
+++.|.||.| ||+|||+||+|+++|.
T Consensus 283 -------------------------------------DG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~ 325 (498)
T 3qb0_A 283 -------------------------------------WNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWR 325 (498)
T ss_dssp -------------------------------------SSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCS
T ss_pred -------------------------------------CCCEEEECchHhhhCchhhCCHhHcCCcccccccccccccccc
Confidence 2578999999 9999999999998865
Q ss_pred ----------------------------------------------------------------CCCCccHHHHHhcccC
Q 006876 515 ----------------------------------------------------------------DQVGLDEMTGVSIRRL 530 (627)
Q Consensus 515 ----------------------------------------------------------------~~~gL~e~I~~sI~~~ 530 (627)
+.+||+++|.+||++
T Consensus 326 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~- 404 (498)
T 3qb0_A 326 NDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMS- 404 (498)
T ss_dssp CCCCCCCBCC-----------------------------------------------------CCSCCHHHHHHHHHHT-
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHh-
Confidence 567999999999995
Q ss_pred CCCChhhHHhccCCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEeeC---CCCccceeeccccccCcCCCCcccccH
Q 006876 531 PTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRA---LDPVLDAWRGASVYATKLQFPQQTFSR 607 (627)
Q Consensus 531 ~~c~~d~r~~L~~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~---~~~~~saW~GgsilAsl~~f~~~~ITk 607 (627)
||+|+|+.||+||||+||+|+||||.+||++||+.++| .++++|+++ ++|.|++|+||||||++++|+++||||
T Consensus 405 --cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk 481 (498)
T 3qb0_A 405 --SDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGK 481 (498)
T ss_dssp --SCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEH
T ss_pred --CCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEH
Confidence 79999999999999999999999999999999999999 889999987 689999999999999999999999999
Q ss_pred HHHhhhCh-hHHHHhc
Q 006876 608 MDYYEKGE-NWLRRYQ 622 (627)
Q Consensus 608 ~eY~E~G~-~iv~~k~ 622 (627)
+||+|+|+ +||++||
T Consensus 482 ~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 482 KEYEEVGVERLLNDRF 497 (498)
T ss_dssp HHHHTTCCHHHHHHTT
T ss_pred HHHhhhCcHhhccccC
Confidence 99999999 8999987
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.5e-60 Score=532.74 Aligned_cols=143 Identities=13% Similarity=0.083 Sum_probs=132.6
Q ss_pred CHHHHHHHHh-hcCCCCCCCc---ccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceE
Q 006876 1 MEYILDFAFD-RLGANGSEID---HPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGL 76 (627)
Q Consensus 1 mE~iwd~if~-~L~v~~~p~d---~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGL 76 (627)
||.||+|+|. +|+|+ |.+ ||||||||+++|+..|++|+|+|||+|+||+++++.+++||+||+| .+|||
T Consensus 177 ~e~iw~~~~~~~L~i~--~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G-----~~tgl 249 (593)
T 4fo0_A 177 IEVIWSHAIQKYLEIP--LKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSG-----LSSTC 249 (593)
T ss_dssp HHHHHHHHHHHTSCCC--GGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHT-----CSEEE
T ss_pred HHHHHHHHHHHhcCCC--chhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCC-----CCceE
Confidence 6899999995 79998 454 9999999999999999999999999999999999999999999999 99999
Q ss_pred EEecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCCCCCC-----cccHHHHHHHHHhccccccCHHH
Q 006876 77 AICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMT-----KLTWEKVEDLKMEHCYIAPDYFS 150 (627)
Q Consensus 77 VVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~~~~~-----~~~~~~ve~IKE~~CyVa~Dy~~ 150 (627)
|||+|++.|+|+||++|+++.+++.++++||++||+||.++|..+++.+.. ..++.++++|||++|||+.|+..
T Consensus 250 VVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~ 328 (593)
T 4fo0_A 250 IVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISG 328 (593)
T ss_dssp EEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCS
T ss_pred EEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHH
Confidence 999999999999999999999999999999999999999999998765432 34778999999999999988544
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=5.4e-58 Score=495.44 Aligned_cols=290 Identities=28% Similarity=0.463 Sum_probs=155.3
Q ss_pred CHHHHHHHH--hhcCCCCCCCcccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceEEE
Q 006876 1 MEYILDFAF--DRLGANGSEIDHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAI 78 (627)
Q Consensus 1 mE~iwd~if--~~L~v~~~p~d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGLVV 78 (627)
||.||+|+| +.|+++ +.++|||||+|+++|...|++++++|||.|+||++++++++++|+|++| .++|+||
T Consensus 85 ~e~i~~~~~~~~~L~~~--~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g-----~~~~lVV 157 (394)
T 1k8k_B 85 MKHLWDYTFGPEKLNID--TRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQG-----LLTGVVV 157 (394)
T ss_dssp ----------------------------------------------------------------------------CCEE
T ss_pred HHHHHHHHhcccccCcC--CCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCC-----CceEEEE
Confidence 689999999 579999 7899999999999999999999999999999999999999999999999 8999999
Q ss_pred ecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCCCCCCcccHHHHHHHHHhccccccCHHHHHHHhhcC
Q 006876 79 CPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKG 158 (627)
Q Consensus 79 DiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~~~~~~~~~~~ve~IKE~~CyVa~Dy~~E~~~~~~~ 158 (627)
|+|++.|+|+||++|+++.+++.++++||+++|++|.++|..+++.+....+...+++||+++|||+.||..+++.....
T Consensus 158 DiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~ 237 (394)
T 1k8k_B 158 DSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALET 237 (394)
T ss_dssp EECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHC
T ss_pred EcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999988888766788999999999999999987765421100
Q ss_pred chhhhhccccccCCCCCCCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHhhhhHHHH
Q 006876 159 TKEAEHKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDI 238 (627)
Q Consensus 159 ~~~~~~~~~~~qlP~~~~~~~~~~s~ee~~~~~~~r~~~~~rl~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~~~ 238 (627)
T Consensus 238 -------------------------------------------------------------------------------- 237 (394)
T 1k8k_B 238 -------------------------------------------------------------------------------- 237 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhcCCCcHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhcccCCCCCcccCCCcccCHHHHHHHHHHhhhhcchh
Q 006876 239 AAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTE 318 (627)
Q Consensus 239 ~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~L~~ipd~~l~~eq~kekr~q~~~k~~~~ 318 (627)
+ .....|.| ||
T Consensus 238 ------------------------------------------~--~~~~~~~l---pd---------------------- 248 (394)
T 1k8k_B 238 ------------------------------------------T--VLVESYTL---PD---------------------- 248 (394)
T ss_dssp ------------------------------------------S--TTCEEEEC---TT----------------------
T ss_pred ------------------------------------------C--cCceEEEC---CC----------------------
Confidence 0 00011222 21
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCcccccHH
Q 006876 319 GRQRAKQKRVEEELEQEKKNQEEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAA 398 (627)
Q Consensus 319 ~r~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~r~s~~ 398 (627)
T Consensus 249 -------------------------------------------------------------------------------- 248 (394)
T 1k8k_B 249 -------------------------------------------------------------------------------- 248 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhhhhccCCCCCCCCCCCchhhHHHHhhcCCCCCCchHhhHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCccc
Q 006876 399 QRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAA 478 (627)
Q Consensus 399 ~~~rm~~~~~~~~~~~~~~d~fg~~d~~w~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~dp~f~~~~~~~~~~~~~ 478 (627)
T Consensus 249 -------------------------------------------------------------------------------- 248 (394)
T 1k8k_B 249 -------------------------------------------------------------------------------- 248 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcCCCCCCCcEEEcCcccccccccCcCCCCCCCCCCCccHHHHHhcccCCCCChhhHHhccCCeEEecCCCCCcChH
Q 006876 479 EIPRVRPLTKEDFQIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMS 558 (627)
Q Consensus 479 ~~~~~~~~~~~~~~I~lg~Erf~~pE~LF~Psl~g~~~~gL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~s~ipGf~ 558 (627)
++.|.++.|||+|||+||+|+++|.+..||+++|.++|.+ ||+|+|+.|++|||||||+|+||||.
T Consensus 249 -----------g~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~---~~~d~r~~l~~nIvLtGG~s~~~G~~ 314 (394)
T 1k8k_B 249 -----------GRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQA---ADIDTRSEFYKHIVLSGGSTMYPGLP 314 (394)
T ss_dssp -----------SCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHH---SCTTTHHHHHTTCEEESGGGCSTTHH
T ss_pred -----------CCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHh---CCHHHHHHHHhCEEEeCcccccccHH
Confidence 3679999999999999999999999999999999999996 69999999999999999999999999
Q ss_pred HHHHHHHHhhc-----------CCCCCeeEeeCCCCccceeeccccccCcCCCC-cccccHHHHhhhChhHHHH
Q 006876 559 ERLEAGIRMIR-----------PCGAPIKVVRALDPVLDAWRGASVYATKLQFP-QQTFSRMDYYEKGENWLRR 620 (627)
Q Consensus 559 eRL~~EL~~l~-----------p~~~~v~V~~~~~~~~saW~GgsilAsl~~f~-~~~ITk~eY~E~G~~iv~~ 620 (627)
+||++||..+. |..++++|+.+++|.+++|+|||++|++++|+ ++||||+||+|+|++++++
T Consensus 315 ~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 315 SRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred HHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 99999999988 88889999999999999999999999999999 9999999999999999987
No 5
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=4.9e-57 Score=484.28 Aligned_cols=293 Identities=31% Similarity=0.578 Sum_probs=262.2
Q ss_pred CHHHHHHHH-hhcCCCCCCCcccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceEEEe
Q 006876 1 MEYILDFAF-DRLGANGSEIDHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAIC 79 (627)
Q Consensus 1 mE~iwd~if-~~L~v~~~p~d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGLVVD 79 (627)
||.||+|+| +.|+++ +.+++||||+|++++...|+++++++||.|++|++++++++++|+|++| .++|+|||
T Consensus 82 ~e~i~~~~~~~~L~~~--~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g-----~~~~lVvD 154 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVA--PEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG-----RTTGIVLD 154 (375)
T ss_dssp HHHHHHHHHHTTSCCC--GGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTT-----CSSEEEEE
T ss_pred HHHHHHHHHHHhcCCC--CcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecC-----CCeEEEEE
Confidence 589999999 579999 7899999999999999999999999999999999999999999999999 89999999
Q ss_pred cCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCCCCCCcccHHHHHHHHHhccccccCHHHHHHHhhcCc
Q 006876 80 PGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGT 159 (627)
Q Consensus 80 iG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~~~~~~~~~~~ve~IKE~~CyVa~Dy~~E~~~~~~~~ 159 (627)
+|+++|+|+||++|+++.+++.++++||+++|++|.++|..+++.+....+...+++||+++|||+.||..++......
T Consensus 155 iG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~- 233 (375)
T 2fxu_A 155 SGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASS- 233 (375)
T ss_dssp ECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHC-
T ss_pred cCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhccc-
Confidence 9999999999999999999999999999999999999999988777555577899999999999999987766432110
Q ss_pred hhhhhccccccCCCCCCCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHhhhhHHHHH
Q 006876 160 KEAEHKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIA 239 (627)
Q Consensus 160 ~~~~~~~~~~qlP~~~~~~~~~~s~ee~~~~~~~r~~~~~rl~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~~~~ 239 (627)
T Consensus 234 -------------------------------------------------------------------------------- 233 (375)
T 2fxu_A 234 -------------------------------------------------------------------------------- 233 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhcCCCcHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhcccCCCCCcccCCCcccCHHHHHHHHHHhhhhcchhH
Q 006876 240 AFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEG 319 (627)
Q Consensus 240 ~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~L~~ipd~~l~~eq~kekr~q~~~k~~~~~ 319 (627)
+ ..+..|.| |
T Consensus 234 -----------------------------------------~--~~~~~~~l---p------------------------ 243 (375)
T 2fxu_A 234 -----------------------------------------S--SLEKSYEL---P------------------------ 243 (375)
T ss_dssp -----------------------------------------S--TTCEEEEC---T------------------------
T ss_pred -----------------------------------------C--ccCeEEEC---C------------------------
Confidence 0 00011221 1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCcccccHHH
Q 006876 320 RQRAKQKRVEEELEQEKKNQEEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQ 399 (627)
Q Consensus 320 r~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~r~s~~~ 399 (627)
T Consensus 244 -------------------------------------------------------------------------------- 243 (375)
T 2fxu_A 244 -------------------------------------------------------------------------------- 243 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhhhhccCCCCCCCCCCCchhhHHHHhhcCCCCCCchHhhHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcccc
Q 006876 400 RERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAE 479 (627)
Q Consensus 400 ~~rm~~~~~~~~~~~~~~d~fg~~d~~w~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~dp~f~~~~~~~~~~~~~~ 479 (627)
T Consensus 244 -------------------------------------------------------------------------------- 243 (375)
T 2fxu_A 244 -------------------------------------------------------------------------------- 243 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcCCCCCCCcEEEcCcccccccccCcCCCCCCCCCCCccHHHHHhcccCCCCChhhHHhccCCeEEecCCCCCcChHH
Q 006876 480 IPRVRPLTKEDFQIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSE 559 (627)
Q Consensus 480 ~~~~~~~~~~~~~I~lg~Erf~~pE~LF~Psl~g~~~~gL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~s~ipGf~e 559 (627)
.++.|.++.|||.|||+||+|+++|.+..||+++|.++|.+ ||+++|+.|++|||||||+|+||||.+
T Consensus 244 ---------dg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~---~~~~~~~~l~~~IvLtGG~s~~pG~~~ 311 (375)
T 2fxu_A 244 ---------DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMK---CDIDIRKDLYANNVMSGGTTMYPGIAD 311 (375)
T ss_dssp ---------TSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHT---SCHHHHHHHHTCEEEESGGGCSTTHHH
T ss_pred ---------CCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHh---CCHHHHHHHHhCcEeeCCCCCCccHHH
Confidence 13679999999999999999999999999999999999995 699999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCeeEeeCCCCccceeeccccccCcCCCCcccccHHHHhhhChhHHHHhcc
Q 006876 560 RLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGENWLRRYQL 623 (627)
Q Consensus 560 RL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilAsl~~f~~~~ITk~eY~E~G~~iv~~k~~ 623 (627)
||++||..+.|...+++|+.+++|.+++|+||+++|++++|+++||||+||+|+|++++++||+
T Consensus 312 rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 312 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp HHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred HHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 9999999999999899999999999999999999999999999999999999999999999985
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=1.4e-54 Score=470.59 Aligned_cols=298 Identities=27% Similarity=0.401 Sum_probs=261.9
Q ss_pred CHHHHHHHHh-hcCCCCCCCcccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhh---------ccccCc
Q 006876 1 MEYILDFAFD-RLGANGSEIDHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKY---------NQQYGI 70 (627)
Q Consensus 1 mE~iwd~if~-~L~v~~~p~d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya---------~G~~~~ 70 (627)
||.||+|+|. .|+++ |.+++||||+|++++...|+++.+++||.|++|++++++++++|+|+ .|
T Consensus 89 ~e~i~~~~~~~~L~~~--~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~---- 162 (418)
T 1k8k_A 89 MERFMEQVIFKYLRAE--PEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERT---- 162 (418)
T ss_dssp HHHHHHHHHHTTTCCC--GGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCC----
T ss_pred HHHHHHHHHHhccCCC--CCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCC----
Confidence 5889999995 79998 78999999999999999999999999999999999999999999998 34
Q ss_pred cCcceEEEecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCCCCCCcccHHHHHHHHHhccccccCHHH
Q 006876 71 CNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFS 150 (627)
Q Consensus 71 ~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~~~~~~~~~~~ve~IKE~~CyVa~Dy~~ 150 (627)
. +|||||+|++.|+|+||++|+++.+++.++++||+++|++|.++|..++..+....+...+++||+++|||+.||..
T Consensus 163 -~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~ 240 (418)
T 1k8k_A 163 -L-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK 240 (418)
T ss_dssp -C-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred -C-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence 4 99999999999999999999999999999999999999999999999888776666789999999999999999887
Q ss_pred HHHHhhcCchhhhhccccccCCCCCCCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHH
Q 006876 151 EAQLFQKGTKEAEHKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQL 230 (627)
Q Consensus 151 E~~~~~~~~~~~~~~~~~~qlP~~~~~~~~~~s~ee~~~~~~~r~~~~~rl~~~~~~~~~~~~~~~e~~l~~~~~~~~~~ 230 (627)
+++++...+
T Consensus 241 e~~~~~~~~----------------------------------------------------------------------- 249 (418)
T 1k8k_A 241 EFNKYDTDG----------------------------------------------------------------------- 249 (418)
T ss_dssp HHHHHHHSG-----------------------------------------------------------------------
T ss_pred HHHhhcccc-----------------------------------------------------------------------
Confidence 765432200
Q ss_pred hhhhHHHHHHhhhhcCCCcHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhcccCCCCCcccCCCcccCHHHHHHHHHH
Q 006876 231 EQVEENDIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQ 310 (627)
Q Consensus 231 ~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~L~~ipd~~l~~eq~kekr~q 310 (627)
......|.| ||+.
T Consensus 250 ----------------------------------------------------~~~~~~~~l---pd~~------------ 262 (418)
T 1k8k_A 250 ----------------------------------------------------SKWIKQYTG---INAI------------ 262 (418)
T ss_dssp ----------------------------------------------------GGTCEEEEE---ECTT------------
T ss_pred ----------------------------------------------------cccceeEEC---CCCC------------
Confidence 000012222 3210
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCC
Q 006876 311 IFLKTTTEGRQRAKQKRVEEELEQEKKNQEEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVG 390 (627)
Q Consensus 311 ~~~k~~~~~r~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~ 390 (627)
T Consensus 263 -------------------------------------------------------------------------------- 262 (418)
T 1k8k_A 263 -------------------------------------------------------------------------------- 262 (418)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccHHHHHHHHhhhhhhccCCCCCCCCCCCchhhHHHHhhcCCCCCCchHhhHHHHHHHHHHhhhhhcCCCCCCCCC
Q 006876 391 RGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQE 470 (627)
Q Consensus 391 ~~~r~s~~~~~rm~~~~~~~~~~~~~~d~fg~~d~~w~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~dp~f~~~~~ 470 (627)
T Consensus 263 -------------------------------------------------------------------------------- 262 (418)
T 1k8k_A 263 -------------------------------------------------------------------------------- 262 (418)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccCCCcCCCCCCCcEEEcCcccccccccCcCCCCCCCCC-CCccHHHHHhcccCCCCChhhHHhccCCeEEec
Q 006876 471 SGPTQSAAEIPRVRPLTKEDFQIVLGVERFRCPEILFRPNWVGIDQ-VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTG 549 (627)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~I~lg~Erf~~pE~LF~Psl~g~~~-~gL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtG 549 (627)
+.....+.++.|||+|||+||+|+++|.+. .||+++|.++|.+ ||+++|+.+++||||||
T Consensus 263 ----------------~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~---~~~~~~~~l~~~IvL~G 323 (418)
T 1k8k_A 263 ----------------SKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQN---CPIDVRRPLYKNIVLSG 323 (418)
T ss_dssp ----------------TCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHH---SCGGGTTHHHHCEEEES
T ss_pred ----------------CCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHc---CCHHHHHHHHhceEEeC
Confidence 001257999999999999999999999885 7999999999996 69999999999999999
Q ss_pred CCCCCcChHHHHHHHHHhhc----------------CCCCCeeEeeCCCCccceeeccccccCcCCCCcccccHHHHhhh
Q 006876 550 GCCLFPGMSERLEAGIRMIR----------------PCGAPIKVVRALDPVLDAWRGASVYATKLQFPQQTFSRMDYYEK 613 (627)
Q Consensus 550 G~s~ipGf~eRL~~EL~~l~----------------p~~~~v~V~~~~~~~~saW~GgsilAsl~~f~~~~ITk~eY~E~ 613 (627)
|+|+||||.+||++||..++ |...+++|+.+++|.+++|+|||++|++++|+++||||+||+|+
T Consensus 324 G~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey~e~ 403 (418)
T 1k8k_A 324 GSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEI 403 (418)
T ss_dssp GGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHHHHH
T ss_pred CccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHHhhh
Confidence 99999999999999999886 66778999999999999999999999999999999999999999
Q ss_pred ChhHHHHhcc
Q 006876 614 GENWLRRYQL 623 (627)
Q Consensus 614 G~~iv~~k~~ 623 (627)
|++|+++|++
T Consensus 404 G~~~~~~~~~ 413 (418)
T 1k8k_A 404 GPSICRHNPV 413 (418)
T ss_dssp CGGGGGCCCC
T ss_pred CHHHHhhhcc
Confidence 9999999764
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=2.6e-51 Score=459.63 Aligned_cols=140 Identities=16% Similarity=0.134 Sum_probs=131.1
Q ss_pred CHHHHHHHHh--hcCCCCCCC---cccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccC-cc
Q 006876 1 MEYILDFAFD--RLGANGSEI---DHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICN-KD 74 (627)
Q Consensus 1 mE~iwd~if~--~L~v~~~p~---d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~-~t 74 (627)
||.||+|+|. +|+++ |. ++|||||||+++|+..|++|+|+|||+|+||+++++.++++|+||+| . +|
T Consensus 199 mE~Iw~y~f~~~~L~V~--p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasG-----l~tt 271 (655)
T 4am6_A 199 VTKLLEHALNSETLNVK--PTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAG-----ISTS 271 (655)
T ss_dssp HHHHHHHHHBSSSCBCC--GGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSC-----CSSC
T ss_pred HHHHHHHHhcccccccc--ccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCC-----CCCc
Confidence 6899999996 89999 65 89999999999999999999999999999999999999999999999 5 89
Q ss_pred eEEEecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCC-----CCCCcccHHHHHHHHHhccccc-cC
Q 006876 75 GLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHP-----QHMTKLTWEKVEDLKMEHCYIA-PD 147 (627)
Q Consensus 75 GLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~-----~~~~~~~~~~ve~IKE~~CyVa-~D 147 (627)
|||||+|++.|+|+||++|+++.++++++++||+++|+||.++|..+++ ++....+.+++++|||++|||+ .|
T Consensus 272 GLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~D 350 (655)
T 4am6_A 272 TCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDAD 350 (655)
T ss_dssp EEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGG
T ss_pred eEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccc
Confidence 9999999999999999999999999999999999999999999999875 4566668899999999999994 44
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.84 E-value=3.5e-21 Score=202.78 Aligned_cols=141 Identities=13% Similarity=0.034 Sum_probs=114.6
Q ss_pred CHHHHHHHHhhcCCCCCCCcccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceEEEec
Q 006876 1 MEYILDFAFDRLGANGSEIDHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICP 80 (627)
Q Consensus 1 mE~iwd~if~~L~v~~~p~d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGLVVDi 80 (627)
+|.+|.|+|.++.....+...+++||.|+.++...|+.+.++ |+.+|++.+.+++++++|+++++.......+++|||+
T Consensus 76 ~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDi 154 (344)
T 1jce_A 76 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDI 154 (344)
T ss_dssp HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEE
T ss_pred HHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEe
Confidence 478999999765331113468999999999999999999995 7999999999999999999998822112368999999
Q ss_pred CCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCCCCCCcccHHHHHHHHHhccccccC
Q 006876 81 GFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPD 147 (627)
Q Consensus 81 G~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~~~~~~~~~~~ve~IKE~~CyVa~D 147 (627)
|+++|+|+++..|.++. ...+++||.++|+.|.++|..++. .......++++|+.+|++..+
T Consensus 155 Gggttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~~~---~~~~~~~ae~~K~~l~~~~~~ 216 (344)
T 1jce_A 155 GGGTTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRETYR---VAIGERTAERVKIEIGNVFPS 216 (344)
T ss_dssp CSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHHHC---EECCHHHHHHHHHHHCBCSCC
T ss_pred CCCeEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHHhC---cccCHHHHHHHHHHHhccCcc
Confidence 99999999999998874 567899999999999999976531 123578899999999887654
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.48 E-value=1.3e-13 Score=140.01 Aligned_cols=120 Identities=15% Similarity=0.126 Sum_probs=92.8
Q ss_pred HHHHHHHHhh----cCCCCCCCcccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceEE
Q 006876 2 EYILDFAFDR----LGANGSEIDHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLA 77 (627)
Q Consensus 2 E~iwd~if~~----L~v~~~p~d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGLV 77 (627)
+.+|.+++.. ++.. ...++++.|.......| ..++.+|+.++++...+..++.++++++| ..+++|
T Consensus 74 ~~~l~~~~~~~~~~~~~~----~~~~v~tvp~~~~~~~~-~~~~~~~~~~g~~~~~i~~e~~A~a~~~~-----~~~~~v 143 (272)
T 3h1q_A 74 IQIVRELKAKVERLLGSE----LFQAATAIPPGTVGRNA-EACGHVVAGAGLELVTLVDEPVAAARALG-----INDGIV 143 (272)
T ss_dssp HHHHHHHHHHHHHHSSSC----CCEEEEECCSCC---CT-THHHHHHHHTTCEEEEEECHHHHHHHHHT-----CSSEEE
T ss_pred HHHHHHHHHHHHHhcCCc----cCeEEEEcCCCCCHHHH-HHHHHHHHHcCCeeeecccHHHHHHHHHc-----CCCEEE
Confidence 5678888742 2333 24566777665555555 45566899999999999999999999999 788999
Q ss_pred EecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCCCCCCcccHHHHHHHHHhcc
Q 006876 78 ICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHC 142 (627)
Q Consensus 78 VDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~~~~~~~~~~~ve~IKE~~C 142 (627)
||+|++.|.++++.+|.++. ...+++||.++++.+.+.|. .+...++.+|+++|
T Consensus 144 iDiGggst~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~ 197 (272)
T 3h1q_A 144 VDIGGGTTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFS 197 (272)
T ss_dssp EEECSSCEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSST
T ss_pred EEECCCcEEEEEEECCEEEE--EecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcC
Confidence 99999999999999999874 46789999999999998874 24566777777654
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.42 E-value=1.3e-13 Score=146.76 Aligned_cols=101 Identities=12% Similarity=-0.086 Sum_probs=79.0
Q ss_pred cccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCc-cCcceEEEecCCCceeeeeeecC-----
Q 006876 20 DHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGI-CNKDGLAICPGFSTTHVIPFVEG----- 93 (627)
Q Consensus 20 d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~-~~~tGLVVDiG~~~T~IvPV~dG----- 93 (627)
...+++|.|..++...|+.+.+. ++..|++.+.++.+|++++++++.... ...+.+|||+|.++|.++.+..+
T Consensus 135 ~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~ 213 (383)
T 1dkg_D 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (383)
T ss_dssp CCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCC
Confidence 34699999999999999999887 688999999999999999998872110 13478999999999999977644
Q ss_pred -eecccC-eEEecccHHHHHHHHHHHHhcc
Q 006876 94 -EPVYRG-SCRTNIGGYHITDYLKQLLSLK 121 (627)
Q Consensus 94 -~~i~~a-~~rl~iGG~~lt~yL~~lL~~r 121 (627)
.....+ ....++||.++++.|.++|..+
T Consensus 214 ~~~~v~~~~~~~~lGG~~id~~l~~~l~~~ 243 (383)
T 1dkg_D 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEE 243 (383)
T ss_dssp CCCEEEEEEEESSCSHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 221112 3446899999999999888653
No 11
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.35 E-value=4.2e-13 Score=149.29 Aligned_cols=118 Identities=14% Similarity=-0.013 Sum_probs=87.7
Q ss_pred HHHHHHHHhhcCCCC----CCCcccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceEE
Q 006876 2 EYILDFAFDRLGANG----SEIDHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLA 77 (627)
Q Consensus 2 E~iwd~if~~L~v~~----~p~d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGLV 77 (627)
|+||.++|.+|.... ......++||.|..++...|+.+.+. ++..|++.+.++++|++|++++|.......+.+|
T Consensus 87 ~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV 165 (509)
T 2v7y_A 87 QEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPTAAALAYGLDKEEDQTILV 165 (509)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEE
Confidence 566666664432110 02246799999999999999999986 5889999999999999999988722112357999
Q ss_pred EecCCCceeeeeee--cCee-cccCeEEecccHHHHHHHHHHHHhc
Q 006876 78 ICPGFSTTHVIPFV--EGEP-VYRGSCRTNIGGYHITDYLKQLLSL 120 (627)
Q Consensus 78 VDiG~~~T~IvPV~--dG~~-i~~a~~rl~iGG~~lt~yL~~lL~~ 120 (627)
||+|+++|.|+.+- +|.. +.......++||.++++.|.++|..
T Consensus 166 ~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 211 (509)
T 2v7y_A 166 YDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVN 211 (509)
T ss_dssp EEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 99999999998665 3533 2222345689999999999988754
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.20 E-value=1.2e-11 Score=131.79 Aligned_cols=100 Identities=12% Similarity=-0.046 Sum_probs=76.6
Q ss_pred cccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccC-ccCcceEEEecCCCceeeeeee--cCeec
Q 006876 20 DHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYG-ICNKDGLAICPGFSTTHVIPFV--EGEPV 96 (627)
Q Consensus 20 d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~-~~~~tGLVVDiG~~~T~IvPV~--dG~~i 96 (627)
-..++||.|..++...|+.+.+.+ +..|++.+.+++++++++++++... ....+-+|||+|.++|.|..+- +|...
T Consensus 153 ~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~ 231 (394)
T 3qfu_A 153 VTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFE 231 (394)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred cceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEE
Confidence 457999999999999999888876 8899999999999999999887211 1123459999999999766553 44332
Q ss_pred ccC-eEEecccHHHHHHHHHHHHhc
Q 006876 97 YRG-SCRTNIGGYHITDYLKQLLSL 120 (627)
Q Consensus 97 ~~a-~~rl~iGG~~lt~yL~~lL~~ 120 (627)
..+ ....++||.++++.|.++|..
T Consensus 232 ~~~~~~~~~lGG~~~d~~l~~~l~~ 256 (394)
T 3qfu_A 232 VQATSGDTHLGGEDFDYKIVRQLIK 256 (394)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCChHHHHHHHHHHHHH
Confidence 222 233799999999999887753
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.01 E-value=2.6e-10 Score=122.24 Aligned_cols=99 Identities=16% Similarity=0.045 Sum_probs=77.2
Q ss_pred cccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCc----cCcceEEEecCCCceeeeeee--cC
Q 006876 20 DHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGI----CNKDGLAICPGFSTTHVIPFV--EG 93 (627)
Q Consensus 20 d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~----~~~tGLVVDiG~~~T~IvPV~--dG 93 (627)
-..++||.|+.++...|+.+.+. ++..|++.+.+++++.+|+++++.... ...+-+|||+|.++|.++.+- +|
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC
Confidence 35799999999999999998877 788999999999999999998873211 234569999999999997663 33
Q ss_pred ee-cccCeEEecccHHHHHHHHHHHHh
Q 006876 94 EP-VYRGSCRTNIGGYHITDYLKQLLS 119 (627)
Q Consensus 94 ~~-i~~a~~rl~iGG~~lt~yL~~lL~ 119 (627)
.. +.......++||.++++.|.+.|.
T Consensus 237 ~~~v~~~~~~~~lGG~~~d~~l~~~l~ 263 (404)
T 3i33_A 237 IFEVKSTAGDTHLGGEDFDNRMVSHLA 263 (404)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 22 222234478999999999988774
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=98.83 E-value=5.8e-09 Score=117.20 Aligned_cols=98 Identities=12% Similarity=0.009 Sum_probs=77.2
Q ss_pred ccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCc--cCcceEEEecCCCceeeeeee--cCee-
Q 006876 21 HPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGI--CNKDGLAICPGFSTTHVIPFV--EGEP- 95 (627)
Q Consensus 21 ~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~--~~~tGLVVDiG~~~T~IvPV~--dG~~- 95 (627)
..++||.|...+...|+.+.+. ++..|++.+.+++.|.+|++++|.... ...+.+|||+|.+++.|+.+- +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~A-~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKDA-GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 4699999999999999988875 678899999999999999888872211 135789999999999998765 4643
Q ss_pred cccCeEEecccHHHHHHHHHHHHh
Q 006876 96 VYRGSCRTNIGGYHITDYLKQLLS 119 (627)
Q Consensus 96 i~~a~~rl~iGG~~lt~yL~~lL~ 119 (627)
+.......++||.++++.|.++|.
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHH
Confidence 222344568999999999988764
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=98.77 E-value=2e-08 Score=113.95 Aligned_cols=99 Identities=13% Similarity=-0.065 Sum_probs=75.6
Q ss_pred ccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCc-cCcceEEEecCCCceeeeeeec------C
Q 006876 21 HPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGI-CNKDGLAICPGFSTTHVIPFVE------G 93 (627)
Q Consensus 21 ~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~-~~~tGLVVDiG~~~T~IvPV~d------G 93 (627)
..++||.|.......|+.+.+. .+..|++.+.+++.|++|++++|.... ...+.+|+|+|.+++.|..+-. |
T Consensus 136 ~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g 214 (605)
T 2kho_A 136 TEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEK 214 (605)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSC
T ss_pred cEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCC
Confidence 4689999999999999988877 467899999999999999888872211 1345799999999999987753 3
Q ss_pred ee-cccCeEEecccHHHHHHHHHHHHhc
Q 006876 94 EP-VYRGSCRTNIGGYHITDYLKQLLSL 120 (627)
Q Consensus 94 ~~-i~~a~~rl~iGG~~lt~yL~~lL~~ 120 (627)
.. +.....-.++||.++++.|.++|..
T Consensus 215 ~~~v~a~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 2kho_A 215 TFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEEEEEEEESSCSGGGTHHHHHHHHHH
T ss_pred eEEEEEECCCCCccHHHHHHHHHHHHHH
Confidence 22 1112234689999999999887754
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.65 E-value=3.7e-08 Score=113.20 Aligned_cols=99 Identities=14% Similarity=0.079 Sum_probs=76.4
Q ss_pred ccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccC-------ccCcceEEEecCCCceeeeeee--
Q 006876 21 HPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYG-------ICNKDGLAICPGFSTTHVIPFV-- 91 (627)
Q Consensus 21 ~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~-------~~~~tGLVVDiG~~~T~IvPV~-- 91 (627)
..++||.|...+...|+.+.+. .+..|++.+.+++.|+++.+++|... ....+.+|||+|+++|.|.-+-
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~A-a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADA-ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 4699999999999999988875 56789999999999999988876211 1134689999999999887764
Q ss_pred cCee-cccCeEEecccHHHHHHHHHHHHhc
Q 006876 92 EGEP-VYRGSCRTNIGGYHITDYLKQLLSL 120 (627)
Q Consensus 92 dG~~-i~~a~~rl~iGG~~lt~yL~~lL~~ 120 (627)
+|.. +.....-.++||.++++.|.++|..
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~ 247 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFAD 247 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHH
Confidence 4543 2222334689999999999887753
No 17
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.51 E-value=8.9e-08 Score=101.46 Aligned_cols=98 Identities=13% Similarity=0.103 Sum_probs=72.8
Q ss_pred HHHHHHHHhhhcCCCeEEeehhhhhhhhhcccc--CccCcceEEEecCCCceeeeeeecCeecccCeEEecccHHHHHHH
Q 006876 36 RSKMAELLFETYGVPSVAFGVDAAFSYKYNQQY--GICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDY 113 (627)
Q Consensus 36 Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~--~~~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~y 113 (627)
.+.+.+ +++..|+.-+.+..+++++.+++|.. .......+|||+|+++|.|+.+.+|.++. ...+++||.++|+.
T Consensus 153 v~~~~~-~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~ 229 (377)
T 2ych_A 153 VAGVLE-ALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEA 229 (377)
T ss_dssp HHHHHH-HHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHH
T ss_pred HHHHHH-HHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHH
Confidence 344444 35788999999999999988876410 00123459999999999999999998875 57789999999999
Q ss_pred HHHHHhccCCCCCCcccHHHHHHHHHhccccc
Q 006876 114 LKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIA 145 (627)
Q Consensus 114 L~~lL~~r~~~~~~~~~~~~ve~IKE~~CyVa 145 (627)
+.+-+ ..+...++.+|..+|++.
T Consensus 230 i~~~~---------~~~~~~aE~~K~~~~~~~ 252 (377)
T 2ych_A 230 IARSF---------NLDLLAAEEVKRTYGMAT 252 (377)
T ss_dssp HHHHT---------TCCHHHHHHHHHHTC---
T ss_pred HHHHh---------CCCHHHHHHHHhhccccc
Confidence 88732 125678899999888754
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.38 E-value=1.4e-06 Score=93.38 Aligned_cols=100 Identities=12% Similarity=-0.016 Sum_probs=73.9
Q ss_pred cccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccC---ccCcceEEEecCCCceeeeee--ecCe
Q 006876 20 DHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYG---ICNKDGLAICPGFSTTHVIPF--VEGE 94 (627)
Q Consensus 20 d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~---~~~~tGLVVDiG~~~T~IvPV--~dG~ 94 (627)
...+++|.|.......|+.+.+. .+.-|+..+.++..+.++.++++... ....+.+|||+|.++|.+.-+ -+|.
T Consensus 150 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~ 228 (409)
T 4gni_A 150 VTSAVITIPTNFTEKQKAALIAA-AAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGM 228 (409)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTE
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCe
Confidence 45699999999999999887776 55679999999999999999887221 123468999999999988764 2332
Q ss_pred ecccC-eEEecccHHHHHHHHHHHHhc
Q 006876 95 PVYRG-SCRTNIGGYHITDYLKQLLSL 120 (627)
Q Consensus 95 ~i~~a-~~rl~iGG~~lt~yL~~lL~~ 120 (627)
.-.-+ ..-.++||.++++.|.+.|..
T Consensus 229 ~~v~~~~~~~~lGG~~~d~~i~~~l~~ 255 (409)
T 4gni_A 229 YTILATVHDYEYHGIALDKVLIDHFSK 255 (409)
T ss_dssp EEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 11111 234789999999999887753
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.19 E-value=4.1e-06 Score=90.97 Aligned_cols=101 Identities=13% Similarity=0.182 Sum_probs=76.7
Q ss_pred ChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceEEEecCCCceeeeeeecCeecccCeEEecccHHHHH
Q 006876 32 PVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHIT 111 (627)
Q Consensus 32 p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt 111 (627)
+....+.+... ++.-|+.-..+..+|+++.+++..........+|||+|+++|.|+-+.+|.+.. ...+++||.++|
T Consensus 166 ~~~~v~n~~~~-~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it 242 (419)
T 4a2a_A 166 PLKVYEMFYNF-LQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVI 242 (419)
T ss_dssp EHHHHHHHHHH-HHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHH
T ss_pred eHHHHHHHHHH-HHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHH
Confidence 34445555544 667788888899999998887751111123689999999999999999998876 467899999999
Q ss_pred HHHHHHHhccCCCCCCcccHHHHHHHHHhcccc
Q 006876 112 DYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYI 144 (627)
Q Consensus 112 ~yL~~lL~~r~~~~~~~~~~~~ve~IKE~~CyV 144 (627)
+-+...|. .....++.+|.++..+
T Consensus 243 ~dIa~~l~---------~~~~~AE~iK~~~g~a 266 (419)
T 4a2a_A 243 KDVSAVLD---------TSFEESERLIITHGNA 266 (419)
T ss_dssp HHHHHHHT---------CCHHHHHHHHHHHCCS
T ss_pred HHHHHHHC---------CCHHHHHHHHHHhccC
Confidence 99987653 2678899999987654
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.06 E-value=1.1e-05 Score=91.63 Aligned_cols=106 Identities=15% Similarity=-0.008 Sum_probs=77.2
Q ss_pred hhcCCCCCCCcccEEEEeCCCCChHHHHHHHHHHhhhcCCCeEEeehhhhhhhhhccccC-ccCcceEEEecCCCceeee
Q 006876 10 DRLGANGSEIDHPVLITECVCNPVHSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQQYG-ICNKDGLAICPGFSTTHVI 88 (627)
Q Consensus 10 ~~L~v~~~p~d~pVLLTEp~~~p~~~Rekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~-~~~~tGLVVDiG~~~T~Iv 88 (627)
..|+.. -..++||.|.......|+.+.+. .+..|++.+.+++.|.+|++++|... ....+-+|+|+|.+++.|.
T Consensus 129 ~~lg~~----v~~~VITVPa~f~~~qr~a~~~A-a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvs 203 (605)
T 4b9q_A 129 DYLGEP----VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDIS 203 (605)
T ss_dssp HHHTSC----CCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEE
T ss_pred HHhCCC----CCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEE
Confidence 346644 34689999999999999887766 56789999999999999998887221 1134578999999999887
Q ss_pred eeecCe------e-cccCeEEecccHHHHHHHHHHHHhc
Q 006876 89 PFVEGE------P-VYRGSCRTNIGGYHITDYLKQLLSL 120 (627)
Q Consensus 89 PV~dG~------~-i~~a~~rl~iGG~~lt~yL~~lL~~ 120 (627)
-+--+. . +.....-.++||.++++.|.++|..
T Consensus 204 i~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 204 IIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHH
Confidence 664332 1 1111223578999999999887753
No 21
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=97.30 E-value=0.00052 Score=72.30 Aligned_cols=102 Identities=17% Similarity=0.072 Sum_probs=75.5
Q ss_pred cccEE--EEeCCCCChHHHHHHHHHHhhh-------------cCCCeEEeehhhhhhhhhc--ccc-CccCcceEEEecC
Q 006876 20 DHPVL--ITECVCNPVHSRSKMAELLFET-------------YGVPSVAFGVDAAFSYKYN--QQY-GICNKDGLAICPG 81 (627)
Q Consensus 20 d~pVL--LTEp~~~p~~~Rekl~EvLFE~-------------f~vpsv~~~~~a~lslya~--G~~-~~~~~tGLVVDiG 81 (627)
...++ ++-|.......|+.+.+.+... +++..+.+.+++++|++++ +.. .....+-+|||+|
T Consensus 119 ~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIG 198 (346)
T 2fsj_A 119 PVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVG 198 (346)
T ss_dssp CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEEC
T ss_pred ceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHhhccccccccCCcEEEEECC
Confidence 34588 8888877777888888876542 2356789999999988874 300 0011345999999
Q ss_pred CCceeeeeee--cCeecccCeEEecccHHHHHHHHHHHHhcc
Q 006876 82 FSTTHVIPFV--EGEPVYRGSCRTNIGGYHITDYLKQLLSLK 121 (627)
Q Consensus 82 ~~~T~IvPV~--dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r 121 (627)
+++|.|+-+. +|.++......+++||.++++.+.+.+..+
T Consensus 199 gGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 199 SRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp SSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 9999999887 677666556888999999999887766543
No 22
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=96.46 E-value=0.0041 Score=65.85 Aligned_cols=102 Identities=14% Similarity=-0.019 Sum_probs=75.9
Q ss_pred ccEEEEeCCCCChHHH-HHHHHHHhhh-----------cCCCeEEeehhhhhhhhhccccCc------cCcceEEEecCC
Q 006876 21 HPVLITECVCNPVHSR-SKMAELLFET-----------YGVPSVAFGVDAAFSYKYNQQYGI------CNKDGLAICPGF 82 (627)
Q Consensus 21 ~pVLLTEp~~~p~~~R-ekl~EvLFE~-----------f~vpsv~~~~~a~lslya~G~~~~------~~~tGLVVDiG~ 82 (627)
..|++.-|.-.....| +.+.+.+... +.|..|.+.++++.|+|+.+.... .....+|||+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3466666665555555 5777776532 334789999999999998751110 135678999999
Q ss_pred CceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccC
Q 006876 83 STTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKH 122 (627)
Q Consensus 83 ~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~ 122 (627)
++|.++.+.+|.++...+..+++||..+++-+.+.|..++
T Consensus 194 gTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~~ 233 (355)
T 3js6_A 194 GTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKKS 233 (355)
T ss_dssp SCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC---
T ss_pred CcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHhc
Confidence 9999999988888888888999999999999999998764
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=96.29 E-value=0.0037 Score=64.66 Aligned_cols=92 Identities=16% Similarity=0.016 Sum_probs=67.7
Q ss_pred hhcCCCeEEeehhhhhhhhhccccCccCcceEEEecCCCceeeeeeecCee-cccCeEEecccHHHHHHHHHHHHhccCC
Q 006876 45 ETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEP-VYRGSCRTNIGGYHITDYLKQLLSLKHP 123 (627)
Q Consensus 45 E~f~vpsv~~~~~a~lslya~G~~~~~~~tGLVVDiG~~~T~IvPV~dG~~-i~~a~~rl~iGG~~lt~yL~~lL~~r~~ 123 (627)
+.++|..+.+.++++.++++.+.......+.+|||+|+++|.++-+.+|.+ +......+++||.++++-+.+.|..+
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-- 213 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLA-- 213 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCC--
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHc--
Confidence 345667899999999988876411111356799999999999999998876 44345677999999999999988754
Q ss_pred CCCCcccHHHHHHH-HHh
Q 006876 124 QHMTKLTWEKVEDL-KME 140 (627)
Q Consensus 124 ~~~~~~~~~~ve~I-KE~ 140 (627)
.. .++...++++ |..
T Consensus 214 ~~--~i~~~~ae~~lk~~ 229 (320)
T 2zgy_A 214 RT--KGSSYLADDIIIHR 229 (320)
T ss_dssp SB--GGGHHHHHHHHHTT
T ss_pred CC--CCCHHHHHHHHHHh
Confidence 22 3455667777 554
No 24
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=95.87 E-value=0.0056 Score=63.97 Aligned_cols=99 Identities=7% Similarity=-0.017 Sum_probs=72.3
Q ss_pred ccEEEEeCCCCCh--HHHHHHHHHHhhh-------------cCCCeEEeehhhhhhhhhccccCccCcceEEEecCCCce
Q 006876 21 HPVLITECVCNPV--HSRSKMAELLFET-------------YGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTT 85 (627)
Q Consensus 21 ~pVLLTEp~~~p~--~~Rekl~EvLFE~-------------f~vpsv~~~~~a~lslya~G~~~~~~~tGLVVDiG~~~T 85 (627)
..|++.-|...-. ..|+.+.+.|-.. +.|..|.+.++++.++|.... .-...+.+|||+|+++|
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~~-~~~~~~v~vvDiGggTt 184 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQE-NFKNKNVAVIDFGGLNM 184 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSCC-CCTTCEEEEEEECSSCE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcch-hhccCCEEEEEeCCCcE
Confidence 3455555544332 3577777776631 234578889999998887520 01135679999999999
Q ss_pred eeeeeecCeecccCeEEecccHHHHHHHHHHHHhc
Q 006876 86 HVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSL 120 (627)
Q Consensus 86 ~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~ 120 (627)
.++-+.+|.++...+..+++||.++++.+.+.|..
T Consensus 185 d~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 185 GFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 99999999998777788999999999999887776
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=93.78 E-value=0.014 Score=58.84 Aligned_cols=65 Identities=18% Similarity=0.297 Sum_probs=49.6
Q ss_pred CccHHHHHhcccCCCCChhhHHhccCCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeecccccc
Q 006876 518 GLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 518 gL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilA 595 (627)
++.+.|...+.. .-.+......|||+||.|..|++.++|++.+. .+++.+++|.+.+-+||+++|
T Consensus 188 ~~~~~v~~~l~~-----~~~~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A 252 (276)
T 4ehu_A 188 GIHTSVAKRVSS-----LVKRIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYA 252 (276)
T ss_dssp HHHHHHHHHHHH-----HHHHHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HHHhcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHH
Confidence 455555555542 23355567899999999999999999987662 357778899999889999987
No 26
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=91.36 E-value=0.76 Score=51.20 Aligned_cols=98 Identities=11% Similarity=-0.012 Sum_probs=66.6
Q ss_pred HHHHHHHhhhcCCCeEEeehhhhhhhhhccccCccCcceEEEecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHH
Q 006876 37 SKMAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQ 116 (627)
Q Consensus 37 ekl~EvLFE~f~vpsv~~~~~a~lslya~G~~~~~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~ 116 (627)
+.+...+=.+++++-=.=..++.+|.+++=.......-.++||+|.++|.+.-+.+|..+. ...+++||.++|.-+..
T Consensus 371 ~NI~~cVer~~gL~veV~g~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~--a~~ip~gG~~VT~DIA~ 448 (610)
T 2d0o_A 371 AMIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII--ATHLAGAGDMVTMIIAR 448 (610)
T ss_dssp HHHHHHHHHHHCCEEEEEEEHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE--EEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHhccCCcceeccccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHH
Confidence 3445444445555211111455666555431111234578999999999999999998876 67899999999999988
Q ss_pred HHhccCCCCCCcccHHHHHHHHHhccccc
Q 006876 117 LLSLKHPQHMTKLTWEKVEDLKMEHCYIA 145 (627)
Q Consensus 117 lL~~r~~~~~~~~~~~~ve~IKE~~CyVa 145 (627)
-|.-. +...+|+||. |..+-
T Consensus 449 ~Lgt~--------d~~~AErIK~-YG~A~ 468 (610)
T 2d0o_A 449 ELGLE--------DRYLAEEIKK-YPLAK 468 (610)
T ss_dssp HHTCC--------CHHHHHHHHH-SCEEE
T ss_pred HhCCC--------CHHHHHHhcc-cCcee
Confidence 87531 4889999999 66554
No 27
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=91.16 E-value=0.45 Score=53.11 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=58.9
Q ss_pred hhhhhhhhhccccCccCcceEEEecCCCceeeeeeecCeecccCeEEecccHHHHHHHHHHHHhccCCCCCCcccHHHHH
Q 006876 56 VDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVE 135 (627)
Q Consensus 56 ~~a~lslya~G~~~~~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~lt~yL~~lL~~r~~~~~~~~~~~~ve 135 (627)
.++.+|.+++=.......-.++||+|.++|.+.-+.+|..+. ...+++||.++|.-+..-|.-. +...+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~~--------d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGLE--------DLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTCS--------CHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCCC--------CHHHHH
Confidence 455555555421111234578999999999999999988876 6789999999999998887531 488999
Q ss_pred HHHHhccccc
Q 006876 136 DLKMEHCYIA 145 (627)
Q Consensus 136 ~IKE~~CyVa 145 (627)
+||. |..+-
T Consensus 462 rIK~-YG~A~ 470 (607)
T 1nbw_A 462 AIKK-YPLAK 470 (607)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9999 66554
No 28
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=82.75 E-value=0.26 Score=50.73 Aligned_cols=71 Identities=13% Similarity=0.035 Sum_probs=50.6
Q ss_pred CccHHHHHhcccCCCCChhhHHhccCCeEEecC-CCCCcChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeecccccc
Q 006876 518 GLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGG-CCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 518 gL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG-~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilA 595 (627)
||..+|.+.|..+ +|-...+.. ..+|+++|| .+..|++.++|.+.+... ..+++.+++++|..-+||+++|
T Consensus 215 sl~~sV~~~I~~l-a~~~a~~~~-i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 215 AVIGVVGEVVTTM-AITVAREFK-TENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHTT-CCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHH-HHHHHHhCC-CCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhC
Confidence 5666666666432 111111223 358999999 999999999999776542 4688889999999999998765
No 29
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=77.71 E-value=1.2 Score=46.67 Aligned_cols=25 Identities=36% Similarity=0.549 Sum_probs=23.5
Q ss_pred cceEEEecCCCceeeeeeecCeecc
Q 006876 73 KDGLAICPGFSTTHVIPFVEGEPVY 97 (627)
Q Consensus 73 ~tGLVVDiG~~~T~IvPV~dG~~i~ 97 (627)
.+||+||+|..+|.|+||.+|.|+.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999976
No 30
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=67.39 E-value=13 Score=38.35 Aligned_cols=80 Identities=11% Similarity=-0.020 Sum_probs=54.5
Q ss_pred ChHHHHHHHHHHhhhcCCCeEEeehh---hhhhhhhccccCccCcceEEEecCCCceeeeeeecCeecccCeEEecccHH
Q 006876 32 PVHSRSKMAELLFETYGVPSVAFGVD---AAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGY 108 (627)
Q Consensus 32 p~~~Rekl~EvLFE~f~vpsv~~~~~---a~lslya~G~~~~~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~ 108 (627)
...++..+.+.+-+..|++ |-++.. +.+++.+.-..-....+++|||+|.++|.++-+-+|.+.. ...+++|+.
T Consensus 95 ~A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~~G~v 171 (315)
T 1t6c_A 95 RAKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVRE--VISLPIGIV 171 (315)
T ss_dssp TSTTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEEE--EEEECCCHH
T ss_pred cCcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCceee--EEEEeccHH
Confidence 3446667777777778886 444433 4444433210000145799999999999999887887654 678999999
Q ss_pred HHHHHH
Q 006876 109 HITDYL 114 (627)
Q Consensus 109 ~lt~yL 114 (627)
.+++.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998875
No 31
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=65.93 E-value=9.7 Score=39.75 Aligned_cols=80 Identities=18% Similarity=0.171 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhhhcCCCeEEeehh---hhhhhhhcccc-Cc--cCcceEEEecCCCceeeeeeec--Ceec--ccCeEEe
Q 006876 34 HSRSKMAELLFETYGVPSVAFGVD---AAFSYKYNQQY-GI--CNKDGLAICPGFSTTHVIPFVE--GEPV--YRGSCRT 103 (627)
Q Consensus 34 ~~Rekl~EvLFE~f~vpsv~~~~~---a~lslya~G~~-~~--~~~tGLVVDiG~~~T~IvPV~d--G~~i--~~a~~rl 103 (627)
.++..+.+-+-+..|++ |-+++. +.+++.+.-.. .. ...+++|||+|.++|.++-+-+ +.+. ......+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 44556666667777776 334333 45555443100 01 1256999999999999987766 4331 1246789
Q ss_pred cccHHHHHHHH
Q 006876 104 NIGGYHITDYL 114 (627)
Q Consensus 104 ~iGG~~lt~yL 114 (627)
|+|+..+++.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 99999998875
No 32
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=65.81 E-value=1.4 Score=45.22 Aligned_cols=47 Identities=9% Similarity=0.200 Sum_probs=32.7
Q ss_pred cCCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeecccccc
Q 006876 542 TSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 542 ~~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilA 595 (627)
...|||+||+|.+ +.+.| ...++.. ...+..+.+|.+++-+|+.+++
T Consensus 273 ~~~vvl~GGga~l--l~~~l----~~~~~~~-~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAV----KKHTQIR-DERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHH----HHTSCCC-GGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHH----HHHhCCC-CCceeeCCCcHHHHHHHHHHhc
Confidence 4789999999987 44444 4444321 1145667899999999998765
No 33
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=63.32 E-value=3.2 Score=43.87 Aligned_cols=75 Identities=8% Similarity=-0.090 Sum_probs=52.1
Q ss_pred CCccHHHHHhcccCCCCChhhHHhccCCeEEecC-CCCCcChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeecccccc
Q 006876 517 VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGG-CCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 517 ~gL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG-~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilA 595 (627)
.||..+|.+.|..+ ++ .-.+..-..+||++|| .+.-|++.+.|...|.-.... .+++..+++++|..-+||++++
T Consensus 283 ~gll~sVa~~I~~l-A~-l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 283 RATLVTITNNIGSI-AR-MCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHHHHHHHHHHHH-HH-HHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HH-HHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 36777777776532 00 0113333468999999 999999999999988642211 3567778889999999998754
No 34
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=62.11 E-value=1.2 Score=46.21 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=34.0
Q ss_pred hccCCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeeccccccC
Q 006876 540 RLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 596 (627)
Q Consensus 540 ~L~~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilAs 596 (627)
.+...||||||+|++ +.+.|+.++ | +.+..+++|.++.-+|.-.++.
T Consensus 277 ~~~~~IvltGGGA~l--~~~~l~~~~----~----~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 277 DQLDSLIFIGGTTQK--LKEQISKTY----P----NNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp TSCSEEEEESTTHHH--HHHHHHHHS----T----TCEECCSSGGGHHHHHHHHHHH
T ss_pred HHccEEEEECChHHH--HHHHHHHHc----C----CCCEecCCChhhHHHHHHHHHh
Confidence 346899999999999 445555543 2 2355678999999898876653
No 35
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=59.82 E-value=1.3 Score=44.52 Aligned_cols=48 Identities=27% Similarity=0.409 Sum_probs=39.0
Q ss_pred cCCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeeccccccCc
Q 006876 542 TSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYATK 597 (627)
Q Consensus 542 ~~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilAsl 597 (627)
...|+++||.+..|+|.+.+.+.+.. .|+.++.+.+++=+|++++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 46899999999999999999888742 3556777888777899999853
No 36
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=56.47 E-value=9.7 Score=39.16 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhhcCCCeEEeehh---hhhhhhhcccc-CccCcceEEEecCCCceeeeeeecCeecccCeEEecccHHH
Q 006876 34 HSRSKMAELLFETYGVPSVAFGVD---AAFSYKYNQQY-GICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYH 109 (627)
Q Consensus 34 ~~Rekl~EvLFE~f~vpsv~~~~~---a~lslya~G~~-~~~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~ 109 (627)
.++..+.+-+.+..|++ |-+++. +.+++++.-.. .....+++|||+|.++|.++-+-+|.+.. ...+|+|.-.
T Consensus 89 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vr 165 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQR 165 (315)
T ss_dssp TTHHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEee--eEEEechhhH
Confidence 44556666667777886 444432 44444432100 01125799999999999999998887664 6789999998
Q ss_pred HHHHH
Q 006876 110 ITDYL 114 (627)
Q Consensus 110 lt~yL 114 (627)
+++.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 87654
No 37
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=49.15 E-value=33 Score=37.66 Aligned_cols=78 Identities=12% Similarity=0.040 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhhhcCCCeEEeehh---hhhhhhhccccCccCcceEEEecCCCceeeeeeecCeecccCeEEecccHHHH
Q 006876 34 HSRSKMAELLFETYGVPSVAFGVD---AAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHI 110 (627)
Q Consensus 34 ~~Rekl~EvLFE~f~vpsv~~~~~---a~lslya~G~~~~~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~l 110 (627)
.++..+.+-+-+..|++ |-+++. +-+++.|.-..-.....++|||+|.++|.++-+-+|.+.. ...+++|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPIL--VESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEEE--EEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeeeE--EEEEeccHHHH
Confidence 45566777777778886 444433 4444443310000112699999999999999877777653 67899999999
Q ss_pred HHHH
Q 006876 111 TDYL 114 (627)
Q Consensus 111 t~yL 114 (627)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 38
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=47.61 E-value=4.1 Score=45.54 Aligned_cols=44 Identities=11% Similarity=0.157 Sum_probs=32.3
Q ss_pred CCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEee-----CCCCccceeecc
Q 006876 543 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVR-----ALDPVLDAWRGA 591 (627)
Q Consensus 543 ~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~-----~~~~~~saW~Gg 591 (627)
..||||||+|+++|+.+=..+.|..+ .|.+-. ...|.|++-.|-
T Consensus 552 ~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGL 600 (607)
T 1nbw_A 552 AFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGL 600 (607)
T ss_dssp CEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHH
Confidence 56999999999999999999988762 233332 336777766554
No 39
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=43.36 E-value=4.1 Score=45.46 Aligned_cols=44 Identities=14% Similarity=0.163 Sum_probs=32.0
Q ss_pred CCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEee-----CCCCccceeecc
Q 006876 543 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVR-----ALDPVLDAWRGA 591 (627)
Q Consensus 543 ~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~-----~~~~~~saW~Gg 591 (627)
..||||||+|+++|+.+=..+.|..+ .|.+-. ...|.|++-.|-
T Consensus 550 ~~VVLTGGsSql~GI~ElA~~iL~~y-----~VRiGrP~~~gv~gP~fAtAvGL 598 (610)
T 2d0o_A 550 PFVVLVGGSSLDFEVPQLVTDALAHY-----RLVAGRGNIRGSEGPRNAVATGL 598 (610)
T ss_dssp CEEEEESGGGGCSSHHHHHHHHTTTS-----SCEEEECCGGGTSTTSCHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCCcHHHHHHH
Confidence 56999999999999999888877652 233333 336777776664
No 40
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=43.22 E-value=48 Score=36.31 Aligned_cols=76 Identities=14% Similarity=0.117 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhhhcCCCeEEeehh---hhhhhhhccccCccCcceEEEecCCCceeeeeeecCeecccCeEEecccHHHH
Q 006876 34 HSRSKMAELLFETYGVPSVAFGVD---AAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHI 110 (627)
Q Consensus 34 ~~Rekl~EvLFE~f~vpsv~~~~~---a~lslya~G~~~~~~~tGLVVDiG~~~T~IvPV~dG~~i~~a~~rl~iGG~~l 110 (627)
.++..+.+-+.+..|++ |-+++- +-+++.|.-. ..+...|+|||+|.++|-++-+-+|.+.. ...+++|.-.+
T Consensus 100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~-~~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl 175 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVIS-GFYQPDGIAGDLGGGSLELIDIKDKSCGE--GITLPLGGLRL 175 (508)
T ss_dssp TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHH-HSSSCEEEEEEECSSCEEEEEEETTEECC--CEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHh-cCCCCCeEEEEeCCCceEEEEeeCCeeee--EEEecceEEeh
Confidence 44556666667777876 444432 4444443310 01134689999999999999998887754 67899999998
Q ss_pred HHH
Q 006876 111 TDY 113 (627)
Q Consensus 111 t~y 113 (627)
++.
T Consensus 176 ~e~ 178 (508)
T 3hi0_A 176 SEQ 178 (508)
T ss_dssp HHH
T ss_pred hhc
Confidence 874
No 41
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=41.15 E-value=8.9 Score=40.39 Aligned_cols=73 Identities=16% Similarity=0.104 Sum_probs=48.9
Q ss_pred CCeEEecCCCCCcC-hHHHHHHHHHhhcCCCCCeeEeeCCCCccceeeccccccCcCC-C------CcccccHHHHhhhC
Q 006876 543 SSILMTGGCCLFPG-MSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYATKLQ-F------PQQTFSRMDYYEKG 614 (627)
Q Consensus 543 ~NIvLtGG~s~ipG-f~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilAsl~~-f------~~~~ITk~eY~E~G 614 (627)
.-|||+||.+..+- |.++|.+.+..+. ++.|+.......+.-+||+.++.... . ...| +..|+-++
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~~~~~~~~~~~~~~~--~~~~~~~~ 370 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRGEEKPKNYSEESRRW--RERYDSYL 370 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTTSSCCEEHHHHHHHH--HHHHHHHT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcCCcccccchhHhHHH--HHHHHhhh
Confidence 56999999987666 8899999888754 46666555544567789887764321 1 0114 67788887
Q ss_pred hhHHHHh
Q 006876 615 ENWLRRY 621 (627)
Q Consensus 615 ~~iv~~k 621 (627)
-.|+++|
T Consensus 371 ~~~~~~~ 377 (381)
T 1saz_A 371 DGILRHH 377 (381)
T ss_dssp GGGCC--
T ss_pred hhhhhcc
Confidence 7777654
No 42
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=37.20 E-value=4.3 Score=42.21 Aligned_cols=47 Identities=21% Similarity=0.238 Sum_probs=31.8
Q ss_pred ccCCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeE-eeCCCCccceeeccccccC
Q 006876 541 LTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKV-VRALDPVLDAWRGASVYAT 596 (627)
Q Consensus 541 L~~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V-~~~~~~~~saW~GgsilAs 596 (627)
....|||+||+|++ +.+.|.+. +|. +.+ ....+|.+++-+|...++.
T Consensus 296 ~i~~IvL~GGga~l--l~~~l~~~----~~~---~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 296 RVTSLIPVGGGSNL--IGDRFEEI----APG---TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GEEEEEEESTTHHH--HGGGGGGG----STT---CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cccEEEEECCcHHH--HHHHHHHH----CcC---cEEeccCCCcHHHHHHHHHHHHh
Confidence 45889999999998 55444443 341 122 2367899999888876653
No 43
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=34.84 E-value=2.1 Score=44.90 Aligned_cols=45 Identities=18% Similarity=0.131 Sum_probs=34.4
Q ss_pred hccCCeEEecCCCCCcC--hHHHHHHHHHhhcCCCCCeeEeeCCCCccceeeccccccC
Q 006876 540 RLTSSILMTGGCCLFPG--MSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 596 (627)
Q Consensus 540 ~L~~NIvLtGG~s~ipG--f~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilAs 596 (627)
..+..|||+||+|.++| +.+.|++++ |. . ++|.++.-.|..+++.
T Consensus 289 ~~~~~Ivl~GGGa~l~~~~l~~~i~~~~----~~------~--~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 289 NSIDRIIVTGGGANIHFDSLSHYYSDVF----EK------A--DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp TSCSEEEEESTTHHHHHHHHHHHSSSCE----EC------C--SSGGGHHHHHHHHHHH
T ss_pred hhccEEEEECcchhcchhhHHHHHHHHC----CC------C--CCcHHHHHHHHHHHHH
Confidence 44689999999999998 666666433 32 1 7999999999988864
No 44
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=34.19 E-value=22 Score=37.21 Aligned_cols=76 Identities=17% Similarity=0.071 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHhhhc-------CCCeEEeehh---hhhhhhhc----cccC-ccCcceEEEecCCCceeeeeeec--Ce
Q 006876 32 PVHSRSKMAELLFETY-------GVPSVAFGVD---AAFSYKYN----QQYG-ICNKDGLAICPGFSTTHVIPFVE--GE 94 (627)
Q Consensus 32 p~~~Rekl~EvLFE~f-------~vpsv~~~~~---a~lslya~----G~~~-~~~~tGLVVDiG~~~T~IvPV~d--G~ 94 (627)
+...++.+.+-+-+.+ ++ .|-++.- +.+++.+. +... ....+++|||+|.++|.|+-... +.
T Consensus 85 ~n~~~~~~l~~v~~~~~~~~~~~g~-~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~~~~~~ 163 (353)
T 3aap_A 85 PQSQQKKYYDELEYWFRQQSQWQLV-EAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAE 163 (353)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSEEEE-EEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEECCCCTT
T ss_pred cHHHHHHHHHHHHHHHhhCCCCCCC-eEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEecCCccc
Confidence 4444666666666555 33 3444433 44444332 2000 11347999999999999987644 33
Q ss_pred ecccCeEEecccHH
Q 006876 95 PVYRGSCRTNIGGY 108 (627)
Q Consensus 95 ~i~~a~~rl~iGG~ 108 (627)
+.......+++||.
T Consensus 164 ~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 164 ISKHNQVELNIYGQ 177 (353)
T ss_dssp SCGGGEEEEEETTE
T ss_pred cCCCceEEEEECCc
Confidence 44333577888884
No 45
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=33.91 E-value=17 Score=36.55 Aligned_cols=51 Identities=16% Similarity=0.118 Sum_probs=39.5
Q ss_pred CCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeecccccc
Q 006876 543 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 543 ~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilA 595 (627)
..|||.||.+..+.|-++|++.|....+ ..+.|..+.-...++-+||+.++
T Consensus 239 ~~IvlgGgi~~~~~~~~~l~~~l~~~~~--~~~~i~~s~lg~~a~~~GAa~l~ 289 (297)
T 4htl_A 239 THIFIGGGITSRPTFIAELKHHMESFGL--RDTIIETATHKNQAGLLGAVYHF 289 (297)
T ss_dssp SEEEEESGGGGSTTHHHHHHHHHTTTCC--TTCEEEECSCTTTHHHHHHHHHH
T ss_pred CEEEEeCcccccHHHHHHHHHHHHHhcc--CCCeEEECCcCChHHHHhHHHHH
Confidence 3599999999999999999999986544 24567666666778888988765
No 46
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=33.24 E-value=9.9 Score=37.90 Aligned_cols=54 Identities=17% Similarity=0.121 Sum_probs=39.2
Q ss_pred HHHHHHhhhcCCCeEEeehhhhhhhhhc---cccCccCcceEEEecCCCceeeeeeecCeecc
Q 006876 38 KMAELLFETYGVPSVAFGVDAAFSYKYN---QQYGICNKDGLAICPGFSTTHVIPFVEGEPVY 97 (627)
Q Consensus 38 kl~EvLFE~f~vpsv~~~~~a~lslya~---G~~~~~~~tGLVVDiG~~~T~IvPV~dG~~i~ 97 (627)
.+.+.| +.|++| |++.+++-+++++- + ....+.++|-+|.+. -..-|++|.++.
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~---~~~~~~v~l~~GtGi-G~giv~~G~l~~ 142 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAH---PELENAACVVIGTGI-GGAMIINGRLHR 142 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHC---TTCSSEEEEEESSSE-EEEEEETTEEEC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhc---CCCCeEEEEEECCce-EEEEEECCEEEe
Confidence 466777 889998 88899987777762 2 015688999999874 455567887765
No 47
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=32.28 E-value=19 Score=36.78 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=39.9
Q ss_pred CCeEEecCCCCCcChHHHHHHHHHhhcCC-CCCeeEeeCCCCccceeecccccc
Q 006876 543 SSILMTGGCCLFPGMSERLEAGIRMIRPC-GAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 543 ~NIvLtGG~s~ipGf~eRL~~EL~~l~p~-~~~v~V~~~~~~~~saW~GgsilA 595 (627)
..|||.||.+..+-|-++|.+.|...... ...+.|..+.-...++-+||+.++
T Consensus 271 ~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 271 HVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp SEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 45899999998888889999888876532 235677776666677778988765
No 48
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=32.00 E-value=11 Score=37.41 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=38.0
Q ss_pred CCeEEecCCCCCcChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeecccccc
Q 006876 543 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 543 ~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilA 595 (627)
..|||.||.+..+-|.++|++.+....+. ..+.|..+.....++.+||+.++
T Consensus 235 ~~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 235 QCVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp SEEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred CEEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 35999999887788999999998875322 24566666555667778887765
No 49
>2l2l_B Methyl-CPG-binding domain protein 2; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=31.92 E-value=68 Score=22.54 Aligned_cols=25 Identities=16% Similarity=0.284 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHHHHHHhHHHHHHHH
Q 006876 182 PSEEEIARKAAIKERQGQRLREMAE 206 (627)
Q Consensus 182 ~s~ee~~~~~~~r~~~~~rl~~~~~ 206 (627)
+|+++++++.++=+..-+||++...
T Consensus 7 Vte~DIr~QE~rV~~aR~rL~eaL~ 31 (36)
T 2l2l_B 7 VTDEDIRKQEERVQQVRKKLEEALM 31 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999998888888888887763
No 50
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=29.95 E-value=21 Score=36.15 Aligned_cols=63 Identities=19% Similarity=0.247 Sum_probs=42.2
Q ss_pred CCeEEecCCCCCcC-hHHHHHHHHHhhcC---CCCCeeEeeCCCCccceeeccccccCcCCCCcccc
Q 006876 543 SSILMTGGCCLFPG-MSERLEAGIRMIRP---CGAPIKVVRALDPVLDAWRGASVYATKLQFPQQTF 605 (627)
Q Consensus 543 ~NIvLtGG~s~ipG-f~eRL~~EL~~l~p---~~~~v~V~~~~~~~~saW~GgsilAsl~~f~~~~I 605 (627)
.-|||.||.+..+. |.++|...++..+. ....+.|..+.-...++-+||+.++--..|..-|-
T Consensus 241 ~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~p~~ 307 (310)
T 3htv_A 241 DAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFCA 307 (310)
T ss_dssp SEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC----
T ss_pred CEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhccccc
Confidence 45899999887765 47788888877652 12356777776667888899998875544555443
No 51
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=27.53 E-value=19 Score=36.40 Aligned_cols=53 Identities=21% Similarity=0.116 Sum_probs=38.4
Q ss_pred CCeEEecCCC-CC-cChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeecccccc
Q 006876 543 SSILMTGGCC-LF-PGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 543 ~NIvLtGG~s-~i-pGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilA 595 (627)
..|||.||.+ .. +-|.++|++.|....+......|..+.-...++-+||+.++
T Consensus 239 ~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 293 (302)
T 3vov_A 239 GVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTA 293 (302)
T ss_dssp SEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHH
T ss_pred CEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHH
Confidence 4588999887 65 45899999999887654444456666556677778988765
No 52
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=27.15 E-value=38 Score=36.76 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=41.0
Q ss_pred CCeEEecCCCCCcChHHHHHHHHHhhcCC------CCCeeEeeCCCCccceeeccccccCc
Q 006876 543 SSILMTGGCCLFPGMSERLEAGIRMIRPC------GAPIKVVRALDPVLDAWRGASVYATK 597 (627)
Q Consensus 543 ~NIvLtGG~s~ipGf~eRL~~EL~~l~p~------~~~v~V~~~~~~~~saW~GgsilAsl 597 (627)
..|.+.||....|+|.+++++.|+.+++. ..+|.+..+.| .+=+||+++|..
T Consensus 385 ~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~d---gsg~GAAl~aa~ 442 (457)
T 2yhx_A 385 GHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAID---GXGAASXVIXSI 442 (457)
T ss_dssp EEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCC---TTTHHHHHHHHH
T ss_pred EEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCC---chhhhHHHHHHH
Confidence 46888899999999999999999998754 45677776655 455788888753
No 53
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=26.29 E-value=81 Score=31.05 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=36.8
Q ss_pred CCeEEecCCCCCcChHHHHHHHHHhhcCCC----CCeeEeeCCCCccceeecccccc
Q 006876 543 SSILMTGGCCLFPGMSERLEAGIRMIRPCG----APIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 543 ~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~----~~v~V~~~~~~~~saW~GgsilA 595 (627)
..|||.||.+..+-|.++|++.+....+.. ..+.|..+.-...++-+||+.++
T Consensus 229 ~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~ 285 (292)
T 2gup_A 229 GVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNW 285 (292)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHH
T ss_pred CEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHH
Confidence 359999998877788888888887754321 23566655555566778888765
No 54
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=25.92 E-value=26 Score=36.49 Aligned_cols=53 Identities=13% Similarity=0.017 Sum_probs=37.6
Q ss_pred CCeEEecCCCCC-cChHHHHHHHHHhhcCCCCCeeEeeCCCCccceeecccccc
Q 006876 543 SSILMTGGCCLF-PGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 543 ~NIvLtGG~s~i-pGf~eRL~~EL~~l~p~~~~v~V~~~~~~~~saW~GgsilA 595 (627)
..|||.||.+.. +-|.++|.+.+....+....+.|..+.....++-+||+.++
T Consensus 316 ~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~ 369 (380)
T 2hoe_A 316 SKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHA 369 (380)
T ss_dssp CEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHH
T ss_pred CEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHH
Confidence 458899998754 67888888888876543345667666555566778888765
No 55
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=23.22 E-value=17 Score=36.52 Aligned_cols=51 Identities=18% Similarity=0.051 Sum_probs=0.0
Q ss_pred eEEecCCCC-CcChHHHHHHHHHhhcCCCC--CeeEeeCCCCccceeecccccc
Q 006876 545 ILMTGGCCL-FPGMSERLEAGIRMIRPCGA--PIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 545 IvLtGG~s~-ipGf~eRL~~EL~~l~p~~~--~v~V~~~~~~~~saW~GgsilA 595 (627)
|||.||.+. .+-|.++|.+.+....+... .+.|..+.....++-+||+.++
T Consensus 266 IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 266 VVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLA 319 (326)
T ss_dssp EEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHG
T ss_pred EEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHH
No 56
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=22.63 E-value=20 Score=36.33 Aligned_cols=53 Identities=17% Similarity=0.087 Sum_probs=39.2
Q ss_pred CCeEEecCCCCC-cChHHHHHHHHHhhcCC--CCCeeEeeCCCCccceeecccccc
Q 006876 543 SSILMTGGCCLF-PGMSERLEAGIRMIRPC--GAPIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 543 ~NIvLtGG~s~i-pGf~eRL~~EL~~l~p~--~~~v~V~~~~~~~~saW~GgsilA 595 (627)
..|||.||.+.. +-|.++|++.|...... ...+.|..+.-...++-+||+.++
T Consensus 262 ~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 262 NNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp CEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred CEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 458999998876 66888999988876542 124677777666778888998765
No 57
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=20.23 E-value=36 Score=34.40 Aligned_cols=53 Identities=15% Similarity=0.028 Sum_probs=38.3
Q ss_pred CCeEEecCCCCCcChHHHHHHHHHhhcCCC---------CCeeEeeCCCCccceeecccccc
Q 006876 543 SSILMTGGCCLFPGMSERLEAGIRMIRPCG---------APIKVVRALDPVLDAWRGASVYA 595 (627)
Q Consensus 543 ~NIvLtGG~s~ipGf~eRL~~EL~~l~p~~---------~~v~V~~~~~~~~saW~GgsilA 595 (627)
..|||.||.+..+.|-++|++.+....... .++.|..+.-...++-+||+.++
T Consensus 226 e~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~ 287 (302)
T 3epq_A 226 XXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLA 287 (302)
T ss_dssp SCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHH
T ss_pred hhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHH
Confidence 568999998887778899999888765321 12356666666677888998775
Done!