BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006880
(627 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/607 (59%), Positives = 444/607 (73%), Gaps = 25/607 (4%)
Query: 36 KIKGTVVLMKKNVLDFN-------------DMKASFLDRLHELLGKGVSMQLISAVNADP 82
KIKGTVVLM+KNVLD N D+ S LD L LG+ VS+QLISA AD
Sbjct: 11 KIKGTVVLMRKNVLDVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRSVSLQLISATKADA 70
Query: 83 ANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLK 142
+G+LGK +LE IT++ L A ++ F I F+WD+ G+PGAF I+N ++F+L
Sbjct: 71 NG--KGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLV 128
Query: 143 TVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLR 202
++TLED+P HG IHFVCNSW+Y +K DR+FF+N+TYLP +TP PL KYR EEL NLR
Sbjct: 129 SLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLR 188
Query: 203 GNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPN 262
G+G GE KEW+R+YDY YNDLG+PDKG +ARPVLGG+ DPN
Sbjct: 189 GDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPN 248
Query: 263 SERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDK--TINEFDSF 320
SE R S D+Y+PRDE FGHLK SDFL Y LKS+ Q +LP + S D T EFDSF
Sbjct: 249 SESR----SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSF 304
Query: 321 DDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRT 380
D+V LY GGIKLP + +SKI P +LKE+ R DGE+ LKFP P VI+ +SAW T
Sbjct: 305 DEVHGLYSGGIKLP-TDIISKIS---PLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMT 360
Query: 381 DEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIE 440
DEEFAREMLAGVNP +I L++FPP S LD +VYG+ S IT+ +E N+ LT+DEAI+
Sbjct: 361 DEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGLTVDEAIQ 420
Query: 441 NKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHG 500
NK+LF LDHHD +MPYLRRIN+T+TK YA+RT+L L+NDGTL+PLAIELSLPHPQGD G
Sbjct: 421 NKRLFLLDHHDPIMPYLRRINATSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 501 AVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVL 560
A S+VF PA+ GVE S+W LAKAY VNDS YHQLVSHWL+THAV+EPF+IATNR LSV+
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVV 540
Query: 561 HPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQAL 620
HPIYKLLHPH+RDTMNIN LAR L+N GGV+E T +Y++EMSAV YK+WVFT+QAL
Sbjct: 541 HPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVYKDWVFTDQAL 600
Query: 621 PADLLKR 627
PADL+KR
Sbjct: 601 PADLIKR 607
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/607 (59%), Positives = 442/607 (72%), Gaps = 25/607 (4%)
Query: 36 KIKGTVVLMKKNVLDFN-------------DMKASFLDRLHELLGKGVSMQLISAVNADP 82
KIKGTVVLM+KNVLD N D+ S LD L LG+ VS+QLISA AD
Sbjct: 11 KIKGTVVLMRKNVLDVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRSVSLQLISATKADA 70
Query: 83 ANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLK 142
+G+LGK +LE IT++ L A ++ F I F+WD+ G+PGAF I+N ++F+L
Sbjct: 71 NG--KGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLV 128
Query: 143 TVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLR 202
++TLED+P HG IHFVCNSW+Y +K DR+FF+N+TYLP +TP PL KYR EEL NLR
Sbjct: 129 SLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLR 188
Query: 203 GNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPN 262
G+G GE KEW+R+YDY YNDLG+PDKG +ARPVLGG+ DPN
Sbjct: 189 GDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPN 248
Query: 263 SERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDK--TINEFDSF 320
SE R S D+Y+PRDE FGHLK SDFL Y LKS+ Q +LP + S D T EFDSF
Sbjct: 249 SESR----SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSF 304
Query: 321 DDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRT 380
D+V LY GGIKLP + +SKI P +LKE+ R DGE+ LKFP P VI+ +SAW T
Sbjct: 305 DEVHGLYSGGIKLP-TDIISKIS---PLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMT 360
Query: 381 DEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIE 440
DEEFAREMLAGVNP +I L++FPP S LD +VYG+ S IT+ +E N+ LT+DEAI+
Sbjct: 361 DEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGLTVDEAIQ 420
Query: 441 NKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHG 500
NK+LF LDHHD +MPYLRRIN+T+TK YA+RT+L L+NDGTL+PLAIELSLPHPQGD G
Sbjct: 421 NKRLFLLDHHDPIMPYLRRINATSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 501 AVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVL 560
A S+VF PA+ GVE S+W LAKAY VNDS YHQLVSH L+THAV+EPF+IATNR LSV+
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAVVEPFIIATNRHLSVV 540
Query: 561 HPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQAL 620
HPIYKLLHPH+RDTMNIN LAR +N GGV+E T +Y++EMSAV YK+WVFT+QAL
Sbjct: 541 HPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEMSAVVYKDWVFTDQAL 600
Query: 621 PADLLKR 627
PADL+KR
Sbjct: 601 PADLIKR 607
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/607 (54%), Positives = 428/607 (70%), Gaps = 29/607 (4%)
Query: 36 KIKGTVVLMKKNVLDFN-------------DMKASFLDRLHELLGKGVSMQLISAVNADP 82
KIKGT+V+M+KNVLD N D S LD + L +S+QLISA AD
Sbjct: 10 KIKGTMVVMQKNVLDINSITSVDGIVGTGLDFLGSALDTV-TFLASSISIQLISATKADG 68
Query: 83 ANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLK 142
+G++GK L IT T + A E + FDWD G+PGAF I+N+ ++FYLK
Sbjct: 69 G---KGKVGKATNLRGKITLPT-IGAKEEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLK 124
Query: 143 TVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLR 202
++ LED+P HG IHF+CNSWVY + YK DR+FF+N TYLP +TP PL KYR EEL N+R
Sbjct: 125 SLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPSETPAPLVKYREEELKNVR 184
Query: 203 GNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPN 262
G+G GE KEWDR+YDY YNDLG+PDKG +YARPVLGGS DPN
Sbjct: 185 GDGTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLGGSA-LPYPRRGRTGRGKTRKDPN 243
Query: 263 SERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTIN--EFDSF 320
SE+ + Y+PRDE FGHLK SDFLAY +KS+ Q +LP +T D + +FD+F
Sbjct: 244 SEKPGDFV----YLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNF 299
Query: 321 DDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRT 380
+V LYEGG+ LP + +S I P ++KEL R DGE+FLK+P P V++ D+SAW T
Sbjct: 300 AEVRKLYEGGVTLP-TNFLSNI---TPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMT 355
Query: 381 DEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIE 440
DEEFARE +AG+NP +I ++EFP +S LD + YG+ IT+ +E N+ LT+++AI+
Sbjct: 356 DEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITKEHLEPNLGGLTVEQAIQ 415
Query: 441 NKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHG 500
NKKLF LDHHD L+PYLR+IN+ TKTYA+RT+ L+NDGTL PLAIELS PHPQG+ +G
Sbjct: 416 NKKLFILDHHDYLIPYLRKINANTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEEYG 475
Query: 501 AVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVL 560
VS+V+ P+ GVE +W LAKAY VND+ YHQ++SHWL+THAV+EPFVIATNR LSV+
Sbjct: 476 PVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRHLSVV 535
Query: 561 HPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQAL 620
HPIYKLL PH+RDTMNIN+LAR+ L+NA G++E T +Y++EMSAV YK+WVFT+QAL
Sbjct: 536 HPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEMSAVIYKDWVFTDQAL 595
Query: 621 PADLLKR 627
P DL+KR
Sbjct: 596 PNDLVKR 602
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/595 (56%), Positives = 420/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL +YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G+LE T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGILETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 420/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL +YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIVETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 420/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL +YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 419/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL +YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G+ E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIAETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 419/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 419/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 419/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 419/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 419/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 419/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL +YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YHQL+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G+ E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIGETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/595 (56%), Positives = 419/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YH+L+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHELMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/595 (56%), Positives = 418/595 (70%), Gaps = 16/595 (2%)
Query: 36 KIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAY 95
KIKGTVVLM KN L+ N S +D L+ LG+ VS+QLISA AD +G++GK +
Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKDTF 63
Query: 96 LEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRI 155
LE T++ L A E+ F I F+WD +MG+PGAF I+N+ +F+LK++TLE + G I
Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123
Query: 156 HFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRV 215
FVCNSWVY T YK R+FF+N TY+P +TP PL YR EEL +LRGNG GE KE+DR+
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183
Query: 216 YDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIY 275
YDY YNDLGNPDK + ARPVLGGS DPN+E++ + Y
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF----Y 239
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKL 333
VPRDE GHLK D L KSL QI+ P S D T EF SF DV +LYEGGIKL
Sbjct: 240 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 299
Query: 334 PNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVN 393
P +S I IP ++KEL R DG+ LKFP P V++ +SAW TDEEFAREM+AGVN
Sbjct: 300 PR-DVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN 355
Query: 394 PVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDAL 453
P +I L+EFPP SNLDP +YG+Q S IT ++ ++ T+DEA+ +++LF LD+HD
Sbjct: 356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIF 413
Query: 454 MPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512
MPY+R+IN N+ KTYA+RT+L L+ DGTLKP+AIELSLPH GD AVS+V PA+ G
Sbjct: 414 MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEG 473
Query: 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFR 572
VE ++W LAKAY VNDS YH L+SHWL+THA +EPFVIAT+R LSVLHPIYKLL PH+R
Sbjct: 474 VESTIWLLAKAYVIVNDSCYHALMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYR 533
Query: 573 DTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKR 627
+ MNINALARQ LINA G++E T P+KY++EMS+ YKNWVFT+QALPADL+KR
Sbjct: 534 NNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/625 (54%), Positives = 422/625 (67%), Gaps = 39/625 (6%)
Query: 29 GVDESKTKIKGTVVLMKKNVLDFNDM----KASFLDRLHELLGKGVS------------- 71
G+ + KIKGTVVLM KNVLDFN + K +D +LG+GVS
Sbjct: 3 GIFDKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFL 62
Query: 72 -----MQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVP 126
MQLISA D + G++GK YLEK + T+ L A + F+I F+WD + G+P
Sbjct: 63 GRNISMQLISATQTDGSG--NGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIP 120
Query: 127 GAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQT 186
GAF I+N +F+L +V LED+P HG I FVCNSWVY YK +R+FF N TYLP T
Sbjct: 121 GAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSAT 180
Query: 187 PEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEXXX 246
P PL KYR+EE LRG+G G+ K++DR+YDY YNDLGNPD G RP+LGG
Sbjct: 181 PAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRPILGGCSIYPY 238
Query: 247 XXXXXXXXXXXXXDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEI 306
DPNSE+ ++YVPRDE FGHLK SDFL Y +KSL ++P
Sbjct: 239 PLRVRTGRERTRTDPNSEK-----PGEVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLF 293
Query: 307 TSLCDK---TINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFL 363
S + T +EF+SF+DV +LYEGGIKLP + +S+I P LKE+ R DGE L
Sbjct: 294 KSAIFQLRVTSSEFESFEDVRSLYEGGIKLP-TDILSQIS---PLPALKEIFRTDGENVL 349
Query: 364 KFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITR 423
+FP P V K +S TDEEFARE++AGVNP +I RLQEFPP S LDP +YG+Q S+IT+
Sbjct: 350 QFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITK 409
Query: 424 ADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNT-KTYASRTLLLLQNDGTL 482
+E NM +T++EA+ ++LF LD+ DA +PYL RINS T K YA+RT+L L++DGTL
Sbjct: 410 EQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTL 469
Query: 483 KPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDT 542
KPLAIELS PHP GD+ G S V PA GV+ ++W LAKA+ VNDSGYHQLVSHWL+T
Sbjct: 470 KPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNT 529
Query: 543 HAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYA 602
HAV+EPF IATNR LSVLHPIYKLL+PH+RDT+NIN LARQ LINA G++E + P KY+
Sbjct: 530 HAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYS 589
Query: 603 MEMSAVSYKNWVFTEQALPADLLKR 627
+EMS+ YKNWVFT QALPADL+KR
Sbjct: 590 IEMSSSVYKNWVFTHQALPADLVKR 614
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 133/321 (41%), Gaps = 62/321 (19%)
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPN 335
+P DERF K DF A K L + + + ++ + N DSF+ + + G
Sbjct: 71 LPVDERFLEDKRIDFEASLAKGLADLAVKDSLNVL-MSWNSLDSFNRIF--WSGQ----- 122
Query: 336 SQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPV 395
SK+ +R+ R +W+ D F + L G NP+
Sbjct: 123 ----SKLAERV----------------------------RDSWKEDALFGYQFLNGTNPM 150
Query: 396 IISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMP 455
++ E P P + Q A +E+ + T+ EA LD A
Sbjct: 151 LLRHSVELPARLKFPPGMEELQ------AQLEKELQGGTLFEA----DFSLLDGIKA--- 197
Query: 456 YLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEG 515
I S+ +L LQ DG L P+ I+L LP + +F P + +
Sbjct: 198 --NVILSSQQYLAVPLVMLKLQPDGKLLPMVIQLQLPR----EGSPLPPLFLPTDPPM-- 249
Query: 516 SVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTM 575
VW LAK + +D H+L SH L H + E +AT R L +HPI+KLL PHFR TM
Sbjct: 250 -VWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTM 308
Query: 576 NINALARQILINAGGVLENTV 596
IN AR L++ G+ + V
Sbjct: 309 EINVRARNGLVSDLGIFDQVV 329
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 27/250 (10%)
Query: 347 PWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPA 406
PW+ L +D R + + R +W+ D F + L G NP+++ R + P
Sbjct: 196 PWKTL-----DDFNRIFWCGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPAR 250
Query: 407 SNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTK 466
P + Q A +E+ + T+ EA LD+ A I
Sbjct: 251 LVFPPGMEELQ------AQLEKELKAGTLFEA----DFALLDNIKA-----NVILYCQQY 295
Query: 467 TYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAA 526
A +L LQ DG L P+ I+L LP + +F P + + VW LAK +
Sbjct: 296 LAAPLVMLKLQPDGKLMPMVIQLHLPK----IGSSPPPLFLPTDPPM---VWLLAKCWVR 348
Query: 527 VNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILI 586
+D H+L SH L H + E F +AT R L +HP++KL+ PH R T+ IN AR L+
Sbjct: 349 SSDFQVHELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLV 408
Query: 587 NAGGVLENTV 596
+ G+ + +
Sbjct: 409 SDFGIFDQIM 418
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 27/250 (10%)
Query: 347 PWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPA 406
PW+ L +D R + + R +W+ D F + L G NP+++ R + P
Sbjct: 196 PWKTL-----DDFNRIFWCGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPAR 250
Query: 407 SNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTK 466
P + Q A +E+ + T+ EA LD+ A I
Sbjct: 251 LVFPPGMEELQ------AQLEKELKAGTLFEA----DFALLDNIKA-----NVILYCQQY 295
Query: 467 TYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAA 526
A +L LQ DG L P+ I+L LP + +F P + + VW LAK +
Sbjct: 296 LAAPLVMLKLQPDGKLMPMVIQLHLP----KIGSSPPPLFLPTDPPM---VWLLAKCWVR 348
Query: 527 VNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILI 586
+D H+L SH L H + E F +AT R L +HP++KL+ PH R T+ IN AR L+
Sbjct: 349 SSDFQVHELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLV 408
Query: 587 NAGGVLENTV 596
+ G+ + +
Sbjct: 409 SDFGIFDQIM 418
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 26/254 (10%)
Query: 378 WRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNE-LTID 436
WR D F + L G NP +I R + P ++ + +E+ ++ T++
Sbjct: 251 WRDDVWFGSQFLNGSNPEVIRRCDKLP------------ENFPVKNEMVEKLLDRGYTLE 298
Query: 437 EAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLL--LQNDGTLKPLAIELSLPHP 494
+A++ +F D+ ++ + +++ K Y + L L L+N+ + P+AI+L
Sbjct: 299 KAMKEGLIFITDY--KILEGIPTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLY---- 352
Query: 495 QGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATN 554
G + ++TP ++ W +AK + D+ YHQ+++H L H ++EP +++
Sbjct: 353 --QQPGENNSIWTPLKDTEWD--WIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSW 408
Query: 555 RQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTV-FPAKYAMEMSAVSYKNW 613
R L +HP++KLL+PH + M IN L R LI GG + + + + Y++
Sbjct: 409 RNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSV 468
Query: 614 VFTEQALPADLLKR 627
F L DL +R
Sbjct: 469 TFDSYDLVKDLRQR 482
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 38/237 (16%)
Query: 378 WRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDE 437
W D F + L G NPVI++R P SN N+H A ++R N +DE
Sbjct: 599 WHEDRWFGYQFLNGANPVILTRCDALP--SNFP---VTNEH---VNASLDRGKN---LDE 647
Query: 438 AIENKKLFTLDHHDALM------PYLRRI----------NSTNTKTYASRTLLLLQND-G 480
I++ ++ +D + P L I + + + A+ L N G
Sbjct: 648 EIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLG 707
Query: 481 TLKPLAIELSL-PHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHW 539
L P+AI+++ P P+ + ++TP E W +AK + V +S +HQL +H
Sbjct: 708 HLMPIAIQINQEPGPE-------NPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 758
Query: 540 LDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTV 596
L TH E F ++T R L+ HPI+KLL PH + I+ + R+ LI +GG+++ ++
Sbjct: 759 LRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSL 815
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 30/226 (13%)
Query: 375 RSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNEL- 433
R W+ DE F+ + L G NP+++ R P +R + M EL
Sbjct: 65 RQCWQDDELFSYQFLNGANPMLLRRSTSLP-----------------SRLVLPSGMEELR 107
Query: 434 -TIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLL--QNDGTLKPLAIELS 490
+++ ++N LF D L+ + K Y + L++L + +G L+P+ I++
Sbjct: 108 AQLEKELQNGSLFEADF--ILLDGIPANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQ 165
Query: 491 LPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFV 550
+ +F P++ + W LAK++ +D H++ H L+TH V E
Sbjct: 166 ----PPNPSSPTPTLFLPSDPPL---AWLLAKSWVRNSDFQLHEIQYHLLNTHLVAEVIA 218
Query: 551 IATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTV 596
+AT R L LHPI+K L PH R TM IN AR LI+ GG+ + V
Sbjct: 219 VATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAV 264
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 38/237 (16%)
Query: 378 WRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDE 437
W D F + L G NPVI++R P SN N+H A ++R N +DE
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP--SNFPVT---NEH---VNASLDRGKN---LDE 277
Query: 438 AIENKKLFTLDHHDALM------PYLRRI----------NSTNTKTYASRTLLLLQND-G 480
I++ ++ +D + P L I + + + A+ L N G
Sbjct: 278 EIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLG 337
Query: 481 TLKPLAIELSL-PHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHW 539
L P+AI+++ P P+ + ++TP E W +AK + V +S +HQL +H
Sbjct: 338 HLMPIAIQINQEPGPE-------NPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 388
Query: 540 LDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTV 596
L TH E F ++T R L+ HPI+KLL PH + I+ + R+ LI +GG+++ ++
Sbjct: 389 LRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSL 445
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 38/237 (16%)
Query: 378 WRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDE 437
W D F + L G NPVI++R P SN N+H A ++R N +DE
Sbjct: 232 WHEDRWFGYQFLNGANPVILTRCDALP--SNFPVT---NEH---VNASLDRGKN---LDE 280
Query: 438 AIENKKLFTLDHHDALM------PYLRRI----------NSTNTKTYASRTLLLLQND-G 480
I++ ++ +D + P L I + + + A+ L N G
Sbjct: 281 EIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLG 340
Query: 481 TLKPLAIELSL-PHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHW 539
L P+AI+++ P P+ + ++TP E W +AK + V +S +HQL +H
Sbjct: 341 HLMPIAIQINQEPGPE-------NPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 391
Query: 540 LDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTV 596
L TH E F ++T R L+ HP++KLL PH + I+ + R+ LI +GG+++ ++
Sbjct: 392 LRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSL 448
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 137/322 (42%), Gaps = 62/322 (19%)
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPN 335
+PRD +F K DF+ K++ + + + + N+F F+ + +K+ N
Sbjct: 181 LPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIF------VKISN 234
Query: 336 SQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPV 395
+ + E V N W+ D F + L G NPV
Sbjct: 235 T--------------ISERVMNH-------------------WQEDLMFGYQFLNGANPV 261
Query: 396 IISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMP 455
+I R E P + + + +ER +L++++ ++ +F +D
Sbjct: 262 LIRRCTELPEKLPVT--------TEMVECSLER---QLSLEQEVQQGNIFIVDFELLDGI 310
Query: 456 YLRRINSTNTKTYASRTLLLLQN-DGTLKPLAIELS-LPHPQGDHHGAVSKVFTPAENGV 513
+ + + A+ LL +N + P+AI+L+ +P G + +F P++
Sbjct: 311 DANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP-------GDENPIFLPSDAKY 363
Query: 514 EGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRD 573
+ W LAK + +D HQ ++H L TH V E F IA RQL +HPI+KLL H R
Sbjct: 364 D---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRF 420
Query: 574 TMNINALARQILINAGGVLENT 595
T+ IN AR+ LI G+ +
Sbjct: 421 TIAINTKAREQLICECGLFDKA 442
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 137/322 (42%), Gaps = 62/322 (19%)
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPN 335
+PRD +F K DF+ K++ + + + + N+F F+ + +K+ N
Sbjct: 181 LPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIF------VKISN 234
Query: 336 SQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPV 395
+ + E V N W+ D F + L G NPV
Sbjct: 235 T--------------ISERVMNH-------------------WQEDLMFGYQFLNGANPV 261
Query: 396 IISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMP 455
+I R E P + + + +ER +L++++ ++ +F +D
Sbjct: 262 LIRRCTELPEKLPVT--------TEMVECSLER---QLSLEQEVQQGNIFIVDFELLDGI 310
Query: 456 YLRRINSTNTKTYASRTLLLLQN-DGTLKPLAIELS-LPHPQGDHHGAVSKVFTPAENGV 513
+ + + A+ LL +N + P+AI+L+ +P G + +F P++
Sbjct: 311 DANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP-------GDENPIFLPSDAKY 363
Query: 514 EGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRD 573
+ W LAK + +D HQ ++H L TH V E F IA RQL +HPI+KLL H R
Sbjct: 364 D---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRF 420
Query: 574 TMNINALARQILINAGGVLENT 595
T+ IN AR+ LI G+ +
Sbjct: 421 TIAINTKAREQLICECGLFDKA 442
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 137/322 (42%), Gaps = 62/322 (19%)
Query: 276 VPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPN 335
+PRD +F K DF+ K++ + + + + N+F F+ + +K+ N
Sbjct: 181 LPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIF------VKISN 234
Query: 336 SQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPV 395
+ + E V N W+ D F + L G NPV
Sbjct: 235 T--------------ISERVMNH-------------------WQEDLMFGYQFLNGANPV 261
Query: 396 IISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMP 455
+I R E P + + + +ER +L++++ ++ +F +D
Sbjct: 262 LIRRCTELPEKLPVT--------TEMVECSLER---QLSLEQEVQQGNIFIVDFELLDGI 310
Query: 456 YLRRINSTNTKTYASRTLLLLQN-DGTLKPLAIELS-LPHPQGDHHGAVSKVFTPAENGV 513
+ + + A+ LL +N + P+AI+L+ +P G + +F P++
Sbjct: 311 DANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP-------GDENPIFLPSDAKY 363
Query: 514 EGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRD 573
+ W LAK + +D HQ ++H L TH V E F IA RQL +HPI+KLL H R
Sbjct: 364 D---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRF 420
Query: 574 TMNINALARQILINAGGVLENT 595
T+ IN AR+ LI G+ +
Sbjct: 421 TIAINTKAREQLICECGLFDKA 442
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 38/237 (16%)
Query: 378 WRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDE 437
W D F + L G NPVI++R P SN N+H A ++R N +DE
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP--SNFPVT---NEH---VNASLDRGKN---LDE 277
Query: 438 AIENKKLFTLDHHDALM------PYLRRI----------NSTNTKTYASRTLLLLQND-G 480
I++ ++ +D + P L I + + + A+ L N G
Sbjct: 278 EIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLG 337
Query: 481 TLKPLAIELSL-PHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHW 539
L P+AI+++ P P+ + ++TP E W +AK + V +S +HQL +H
Sbjct: 338 HLMPIAIQINQEPGPE-------NPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 388
Query: 540 LDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTV 596
L TH E F ++T R L+ HPI+KLL PH + I+ + R+ L +GG+++ ++
Sbjct: 389 LRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGGIVDQSL 445
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 38/237 (16%)
Query: 378 WRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDE 437
W D F + L G NPVI++R P SN N+H A ++R N +DE
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP--SNFPVT---NEH---VNASLDRGKN---LDE 277
Query: 438 AIENKKLFTLDHHDALM------PYLRRI----------NSTNTKTYASRTLLLLQND-G 480
I++ ++ +D + P L I + + + A+ L N G
Sbjct: 278 EIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLG 337
Query: 481 TLKPLAIELSL-PHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHW 539
L P+AI+++ P P+ + ++TP E W +AK + V +S +HQL +H
Sbjct: 338 HLMPIAIQINQEPGPE-------NPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 388
Query: 540 LDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTV 596
L TH E F ++T R L+ HPI+KLL PH + I+ + R+ L +GG+++ ++
Sbjct: 389 LRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGGIVDQSL 445
>pdb|4GYR|A Chain A, Granulibacter Bethesdensis Allophanate Hydrolase Apo
pdb|4GYR|B Chain B, Granulibacter Bethesdensis Allophanate Hydrolase Apo
pdb|4GYS|A Chain A, Granulibacter Bethesdensis Allophanate Hydrolase
Co-crystallized With Malonate
pdb|4GYS|B Chain B, Granulibacter Bethesdensis Allophanate Hydrolase
Co-crystallized With Malonate
Length = 621
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 261 PNSERRLPLISLDIYVPR-DERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTIN-EFD 318
P+ +RRLP + L + VPR D+R +F AYA +L Q L E+ SL + + +F
Sbjct: 265 PSQKRRLPHVGLRVGVPRQDQR----EFYGNTAYA--ALYQRALDEMISLDAELVEIDFA 318
Query: 319 SFDDVLNLYEGG 330
F D L GG
Sbjct: 319 PFRDAAKLLYGG 330
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,532,948
Number of Sequences: 62578
Number of extensions: 820582
Number of successful extensions: 2038
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1887
Number of HSP's gapped (non-prelim): 34
length of query: 627
length of database: 14,973,337
effective HSP length: 105
effective length of query: 522
effective length of database: 8,402,647
effective search space: 4386181734
effective search space used: 4386181734
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)