BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006883
(627 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q11207|PARP2_ARATH Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana GN=PARP2
PE=2 SV=1
Length = 637
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/638 (65%), Positives = 495/638 (77%), Gaps = 13/638 (2%)
Query: 1 MASNLKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEENKKSVGSKKRGRECDETDSNG 60
MA+ LKVD+LR KLA+RGLST G KA+LV+RLEEA+ E+ KK KR R D+
Sbjct: 1 MANKLKVDELRLKLAERGLSTTGVKAVLVERLEEAIAEDTKKEESKSKRKRNS-SNDTYE 59
Query: 61 SQKVKSIESFGQMGVKQLREQADLRGLSKAGTKKELLERLCNHAEQSDSKDTLLQEEVNE 120
S K+ +I F M VK+LRE+A RGL GTKK+LLERLCN A + +E
Sbjct: 60 SNKLIAIGEFRGMIVKELREEAIKRGLDTTGTKKDLLERLCNDANNVSNAPVKSSNGTDE 119
Query: 121 CKDEK-----------IVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAMLNQTNVG 169
+D+ IV ATKKGAAVLD W+P+ IK YHV Q+ +D+YDA+LNQTNV
Sbjct: 120 AEDDNNGFEEEKKEEKIVTATKKGAAVLDQWIPDEIKSQYHVLQRGDDVYDAILNQTNVR 179
Query: 170 DNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGPYNLQDTAINEFEQKFFAKTK 229
DNNNKF+V+Q+LESD YMVY RWGRVG+KGQ K+ GPY+ D AI F KF KTK
Sbjct: 180 DNNNKFFVLQVLESDSKKTYMVYTRWGRVGVKGQSKLDGPYDSWDRAIEIFTNKFNDKTK 239
Query: 230 NHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQPRNTKLEPCVAKFISL 289
N+WS+R++F +PK YTWLEMDY + + V ++ P+S+ ++P +KL+ VAKFISL
Sbjct: 240 NYWSDRKEFIPHPKSYTWLEMDYGKEENDSPVNNDIPSSSSEVKPEQSKLDTRVAKFISL 299
Query: 290 ICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKRIADVIHPPDRRKLEELSGEF 349
ICN+SMM Q MMEIGYNANKLPLGK+SKSTI KGY+VLKRI++VI DR +LEELSGEF
Sbjct: 300 ICNVSMMAQHMMEIGYNANKLPLGKISKSTISKGYEVLKRISEVIDRYDRTRLEELSGEF 359
Query: 350 YTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQ 409
YTVIPHDFGFKKM FVIDTPQKLK K+EMVEALGEIE+ATKLL D +Q DPLY HYQ
Sbjct: 360 YTVIPHDFGFKKMSQFVIDTPQKLKQKIEMVEALGEIELATKLLSVDPGLQDDPLYYHYQ 419
Query: 410 RLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNS 469
+L+C LTP+ DS EFS++ANY+ NTHAKTHS Y+V+I Q+FR R E +RF +QFS+S
Sbjct: 420 QLNCGLTPVGNDSEEFSMVANYMENTHAKTHSGYTVEIAQLFRASRAVEADRF-QQFSSS 478
Query: 470 KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSA 529
KNRMLLWHGSRLTNW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCYA+ A
Sbjct: 479 KNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYANTGA 538
Query: 530 TAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLG 589
GVLLLCEVALGDM+ELLY++Y+AD LP GKLSTKGVG+TAP+P EA+TLEDGV+VPLG
Sbjct: 539 NDGVLLLCEVALGDMNELLYSDYNADNLPPGKLSTKGVGKTAPNPSEAQTLEDGVVVPLG 598
Query: 590 KPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
KP E+ SKG LLYNEYIVY+V+QI+MRYV+QV F YK
Sbjct: 599 KPVERSCSKGMLLYNEYIVYNVEQIKMRYVIQVKFNYK 636
>sp|O50017|PARP2_MAIZE Poly [ADP-ribose] polymerase 2 OS=Zea mays GN=PARP2 PE=2 SV=1
Length = 653
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/658 (59%), Positives = 487/658 (74%), Gaps = 38/658 (5%)
Query: 1 MASNLKVDQLRAKLAQRGLSTAGTKAILVQRLEEA---------------------VEEE 39
M++ L+V +RA+L +RGL +GTK LV+RL+ A V +
Sbjct: 1 MSARLRVADVRAELQRRGLDVSGTKPALVRRLDAAICEAEKAVVAAAPTSVANGYDVAVD 60
Query: 40 NKKSVGSKKRGRECDETDSNGSQKVKSIESFGQMGVKQLREQADLRGLSKAGTKKELLER 99
K++ G+ KR R D + + M ++L+ A RG++ G KK++++R
Sbjct: 61 GKRNCGNNKRKRSGDGGEEGNGDTCTDVTKLEGMSYRELQGLAKARGVAANGGKKDVIQR 120
Query: 100 LCNH----AEQSDSKDTLLQEEVN------ECKDEKIVKATKKGAAVLDPWLPEHIKISY 149
L + A +D +E + E K EK+V ATKKGAAVLD +P+HIK++Y
Sbjct: 121 LLSATAGPAAVADGGPLGAKEVIKGGDEEVEVKKEKMVTATKKGAAVLDQHIPDHIKVNY 180
Query: 150 HVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGP 209
HV Q ++IYDA LNQTNVGDNNNKFY+IQ+LESD GG +MVYNRWGRVG++GQDK+ GP
Sbjct: 181 HVLQVGDEIYDATLNQTNVGDNNNKFYIIQVLESDAGGSFMVYNRWGRVGVRGQDKLHGP 240
Query: 210 YNLQDTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNST 269
+D AI EFE KF KT NHWS+R+ F Y K YTWLEMDY +KE +
Sbjct: 241 SPTRDQAIYEFEGKFHNKTNNHWSDRKNFKCYAKKYTWLEMDYGETEKEIE------KGS 294
Query: 270 INIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKR 329
I Q + TKLE +A+FISLICNISMMKQ M+EIGYNA KLPLGKL K+TILKGY VLKR
Sbjct: 295 ITDQIKETKLETRIAQFISLICNISMMKQRMVEIGYNAEKLPLGKLRKATILKGYHVLKR 354
Query: 330 IADVIHPPDRRKLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVA 389
I+DVI DRR LE+L+GEFYTVIPHDFGF+KMR+F+IDTPQKLK KLEMVEALGEIE+A
Sbjct: 355 ISDVISKADRRHLEQLTGEFYTVIPHDFGFRKMREFIIDTPQKLKAKLEMVEALGEIEIA 414
Query: 390 TKLLEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQ 449
TKLLEDD+ Q DPLY+ Y++LHC TPLE DS E+S+I +YL NTH KTHS Y+VDIVQ
Sbjct: 415 TKLLEDDSSDQDDPLYARYKQLHCDFTPLEADSDEYSMIKSYLRNTHGKTHSGYTVDIVQ 474
Query: 450 IFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKG 509
IF+V R GETERF+K F++++NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKG
Sbjct: 475 IFKVSRHGETERFQK-FASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKG 533
Query: 510 VYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQ 569
VYFADMFSKSANYCYAS + +GVLLLCEVALGDM+ELL A+YDA+ LP GKL +KGVGQ
Sbjct: 534 VYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLRSKGVGQ 593
Query: 570 TAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
TAP+ +E++ +DGV+VPLG+PK++ + +G LLYNEYIVY+VDQIRMRYV+ VNF +K
Sbjct: 594 TAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFK 651
>sp|Q5Z8Q9|PRP2A_ORYSJ Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica
GN=PARP2-A PE=3 SV=2
Length = 660
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/665 (58%), Positives = 485/665 (72%), Gaps = 45/665 (6%)
Query: 1 MASNLKVDQLRAKLAQRGLSTAGTKAILVQRLEE-----------------------AVE 37
M++ L+V++LRA+L +RGL +G K +LV+RL+ V
Sbjct: 1 MSARLRVEELRAELQRRGLDASGNKPVLVRRLDAAIRKEEEEEAAVSAAAKEEADAGGVV 60
Query: 38 EENKKSVGSKKRGRECDETDSNGSQKVKSIESFGQMGVKQLREQADLRGLSKAGTKKELL 97
+ +KR R D D + S+ M ++L+ A RGL+ G+KKE++
Sbjct: 61 DGEGNGEDKRKRKRRGDGEDVDNSES--DAAKLEGMSYRELQALAKSRGLAANGSKKEVI 118
Query: 98 ERLCNHAEQSDS----KDTLLQ------EEVNECKDEKIVKATKKGAAVLDPWLPEHIKI 147
ERL +D K + + + V EC+ EKIV AT+KGAAVLD +P+HIK+
Sbjct: 119 ERLLCAPSDTDGGVQDKKKIAKGFADGDDRVEECRKEKIVTATRKGAAVLDQHIPDHIKM 178
Query: 148 SYHVFQ-----KDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKG 202
+YHV Q K ++IYDA +NQTNVGDNNNKFY+IQ LESD GG +MVYNRWGRVG +G
Sbjct: 179 TYHVLQVWFLLKGDEIYDATMNQTNVGDNNNKFYIIQALESDAGGSFMVYNRWGRVGARG 238
Query: 203 QDKIFGPYNLQDTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVV 262
QDK+ GP++ ++ AI EFE KF KT NHWS+R+ F Y + YTWLEMDY +E +
Sbjct: 239 QDKLHGPFSSREQAIYEFEGKFHGKTNNHWSDRKSFECYARKYTWLEMDYGEADRETN-- 296
Query: 263 HEKPNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILK 322
K S Q + TKLE +A FISLICNISMMKQ M+EIGYN++KLPLGKLSKSTI K
Sbjct: 297 --KKVSPSTDQIKETKLETRIASFISLICNISMMKQQMVEIGYNSDKLPLGKLSKSTIFK 354
Query: 323 GYDVLKRIADVIHPPDRRKLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEA 382
GYDVLKRI++VI DRR+LE+L+GEFYTVIPHDFGFKKMR+F+IDTPQKLK KLEMVEA
Sbjct: 355 GYDVLKRISNVISRADRRQLEQLTGEFYTVIPHDFGFKKMREFIIDTPQKLKAKLEMVEA 414
Query: 383 LGEIEVATKLLEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSA 442
LGEIE+ATKLLEDD+ Q DPLY+ Y++L C TPLEV S E+S+I YL NTH KTH++
Sbjct: 415 LGEIEIATKLLEDDSTDQDDPLYARYKQLSCDFTPLEVGSEEYSMIKTYLANTHGKTHTS 474
Query: 443 YSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPAT 502
Y+VD+VQIF+V R GE ERF+K F+ + NRMLLWHGSRLTNW GILSQGLRIAPPEAP T
Sbjct: 475 YTVDVVQIFKVSRHGEMERFQK-FATAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVT 533
Query: 503 GYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKL 562
GYMFGKGVYFADMFSKSANYCYAS + +GVLLLCEVALG+M+ELL A+YDA+ LP GKL
Sbjct: 534 GYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGEMNELLNADYDANNLPKGKL 593
Query: 563 STKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQV 622
STKGVGQT P+ E++ +DGV+VPLGKPK + + +G LLYNE+IVY+VDQIRMRYV+ V
Sbjct: 594 STKGVGQTEPNTAESKITDDGVVVPLGKPKAEPSKRGSLLYNEFIVYNVDQIRMRYVLHV 653
Query: 623 NFKYK 627
+F +K
Sbjct: 654 SFNFK 658
>sp|Q0JMY1|PRP2B_ORYSJ Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica
GN=PARP2-B PE=3 SV=2
Length = 605
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/510 (63%), Positives = 389/510 (76%), Gaps = 34/510 (6%)
Query: 120 ECKDEKIVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAMLNQTNVGDNNNKFYVIQ 179
+CK EKIV ATKKGAAVLD ++P++IK +YHV Q ++IYDA +NQTNVG NNNKFY+IQ
Sbjct: 125 QCKKEKIVTATKKGAAVLDQYIPDNIKTAYHVLQVGDEIYDATMNQTNVGGNNNKFYIIQ 184
Query: 180 LLESDGGGEYMVYNRWGRVGMKGQDKIFGPYNLQDTAINEFEQKFFAKTKNHWSNRRQFT 239
LESD GG +MVY+RWGRVG + HWS R+
Sbjct: 185 ALESDAGGNFMVYSRWGRVGTR---------------------------DIHWSYRKGSH 217
Query: 240 SYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQPRNTKLEPCVAKFISLICNISMMKQL 299
Y YTWLEMDY KE + K S+I Q TKLE A FISLIC+ISMMKQ
Sbjct: 218 CYAHKYTWLEMDYGEADKETN----KKTSSITNQLEETKLETRTASFISLICDISMMKQQ 273
Query: 300 MMEIGYNANKLPLGKLSKSTILKGYDVLKRIADVIHPPD--RRKLEELSGEFYTVIPHDF 357
M+EIGYNA+KLPLGKLSKSTILKGYDVLKRI++VI D R +LE+L+GEFY+VIPHDF
Sbjct: 274 MVEIGYNADKLPLGKLSKSTILKGYDVLKRISNVISGADTDRTQLEQLTGEFYSVIPHDF 333
Query: 358 GFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQRLHCQLTP 417
GFKKM +F+IDTPQKLK KLEMVEAL EIE+A KLLEDD+ Q PLY+ Y++ C TP
Sbjct: 334 GFKKMSEFIIDTPQKLKAKLEMVEALSEIEIAIKLLEDDSSDQDHPLYARYKQFCCDFTP 393
Query: 418 LEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWH 477
LEVDS E+S+I YL NTH KTH+ Y+VDIVQIF+V R GE ERF+K F+++ NRMLLWH
Sbjct: 394 LEVDSEEYSMIKTYLTNTHGKTHTGYTVDIVQIFKVSRLGEMERFQK-FASAGNRMLLWH 452
Query: 478 GSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLC 537
GSRLTNW GILSQGLRIAPPEAP +G+MFGKGVYFADMFSKSANYC AS + +GV+LLC
Sbjct: 453 GSRLTNWAGILSQGLRIAPPEAPISGFMFGKGVYFADMFSKSANYCCASEACKSGVMLLC 512
Query: 538 EVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNS 597
EVALG+M+ELLY ++ AD LP+GKLSTKGVGQT P+ E++ +DG+++PLGKP++ +
Sbjct: 513 EVALGEMNELLYGDFGADNLPNGKLSTKGVGQTEPNIAESKITDDGMVIPLGKPEKVPSR 572
Query: 598 KGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
+G L+YNEYIVY+VDQIRMRY++ VNF +K
Sbjct: 573 RGSLMYNEYIVYNVDQIRMRYILNVNFNFK 602
>sp|O88554|PARP2_MOUSE Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=Parp2 PE=1 SV=3
Length = 559
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/503 (47%), Positives = 323/503 (64%), Gaps = 24/503 (4%)
Query: 132 KGAAVLDPWLPEHIKISYHVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMV 191
KG A +DP + + HV+ + +D+YD MLNQTN+ NNNK+Y+IQLLE D + V
Sbjct: 69 KGKAPVDPECAAKLGKA-HVYCEGDDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQRNFSV 127
Query: 192 YNRWGRVGMKGQDKIFGPYNLQDTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMD 251
+ RWGRVG GQ + + A F++KF KTKN+W +R F P Y L+MD
Sbjct: 128 WMRWGRVGKTGQHSLVTCSGDLNKAKEIFQKKFLDKTKNNWEDRENFEKVPGKYDMLQMD 187
Query: 252 YSANQKEESVVHE----KPNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNA 307
Y+A+ ++ES E KP S ++++ V + + LICN+ M+++M+E+ Y+
Sbjct: 188 YAASTQDESKTKEEETLKPESQLDLR---------VQELLKLICNVQTMEEMMIEMKYDT 238
Query: 308 NKLPLGKLSKSTILKGYDVLKRIADVIHPPDR-RKLEELSGEFYTVIPHDFGFKKMRDFV 366
+ PLGKL+ + I GY LK+I D I R L E EFYT IPHDFG V
Sbjct: 239 KRAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHGRALVEACNEFYTRIPHDFGLSIPP--V 296
Query: 367 IDTPQKLKLKLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFS 426
I T ++L K++++EALG+IE+A KL++ + + PL HY+ LHC L PL+ +S EF
Sbjct: 297 IRTEKELSDKVKLLEALGDIEIALKLVKSERQGLEHPLDQHYRNLHCALRPLDHESNEFK 356
Query: 427 LIANYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTG 486
+I+ YL +THA TH Y++ ++ +F VE+EGE E FR+ N RMLLWHGSRL+NW G
Sbjct: 357 VISQYLQSTHAPTHKDYTMTLLDVFEVEKEGEKEAFREDLPN---RMLLWHGSRLSNWVG 413
Query: 487 ILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSE 546
ILS GLR+APPEAP TGYMFGKG+YFADM SKSANYC+AS G+LLL EVALG +E
Sbjct: 414 ILSHGLRVAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQCNE 473
Query: 547 LLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQ--LNSKGHLL-Y 603
LL AN A L GK STKG+G+ AP P TL +G VPLG + LN +G+ L Y
Sbjct: 474 LLEANPKAQGLLRGKHSTKGMGKMAPSPAHFITL-NGSTVPLGPASDTGILNPEGYTLNY 532
Query: 604 NEYIVYSVDQIRMRYVVQVNFKY 626
NE+IVYS +Q+RMRY++++ F +
Sbjct: 533 NEFIVYSPNQVRMRYLLKIQFNF 555
>sp|Q9UGN5|PARP2_HUMAN Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=PARP2 PE=1 SV=2
Length = 583
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/499 (47%), Positives = 325/499 (65%), Gaps = 12/499 (2%)
Query: 132 KGAAVLDPWLPEHIKISYHVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMV 191
KG A +DP + + HV+ + ND+YD MLNQTN+ NNNK+Y+IQLLE D + V
Sbjct: 89 KGKAPVDPECTAKVGKA-HVYCEGNDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQRNFSV 147
Query: 192 YNRWGRVGMKGQDKIFGPYNLQDTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMD 251
+ RWGRVG GQ + + A F++KF KTKN+W +R +F P Y L+MD
Sbjct: 148 WMRWGRVGKMGQHSLVACSGNLNKAKEIFQKKFLDKTKNNWEDREKFEKVPGKYDMLQMD 207
Query: 252 YSANQKEESVVHEKPNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLP 311
Y+ N ++E ++ + ++P ++L+ V + I LICN+ M+++MME+ YN K P
Sbjct: 208 YATNTQDEEETKKEESLKSPLKPE-SQLDLRVQELIKLICNVQAMEEMMMEMKYNTKKAP 266
Query: 312 LGKLSKSTILKGYDVLKRIADVIHPPDR-RKLEELSGEFYTVIPHDFGFKKMRDFVIDTP 370
LGKL+ + I GY LK+I D I R L E EFYT IPHDFG + +I T
Sbjct: 267 LGKLTVAQIKAGYQSLKKIEDCIRAGQHGRALMEACNEFYTRIPHDFGLRT--PPLIRTQ 324
Query: 371 QKLKLKLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIAN 430
++L K++++EALG+IE+A KL++ + + PL HY+ LHC L PL+ +S EF +I+
Sbjct: 325 KELSEKIQLLEALGDIEIAIKLVKTELQSPEHPLDQHYRNLHCALRPLDHESYEFKVISQ 384
Query: 431 YLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQ 490
YL +THA THS Y++ ++ +F VE++GE E FR+ N RMLLWHGSR++NW GILS
Sbjct: 385 YLQSTHAPTHSDYTMTLLDLFEVEKDGEKEAFREDLHN---RMLLWHGSRMSNWVGILSH 441
Query: 491 GLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYA 550
GLRIAPPEAP TGYMFGKG+YFADM SKSANYC+AS G+LLL EVALG +ELL A
Sbjct: 442 GLRIAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLEA 501
Query: 551 NYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQ--LNSKGHLL-YNEYI 607
N A+ L GK STKG+G+ AP TL +G VPLG + LN G+ L YNEYI
Sbjct: 502 NPKAEGLLQGKHSTKGLGKMAPSSAHFVTL-NGSTVPLGPASDTGILNPDGYTLNYNEYI 560
Query: 608 VYSVDQIRMRYVVQVNFKY 626
VY+ +Q+RMRY+++V F +
Sbjct: 561 VYNPNQVRMRYLLKVQFNF 579
>sp|P27008|PARP1_RAT Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=1
SV=4
Length = 1014
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/528 (41%), Positives = 324/528 (61%), Gaps = 23/528 (4%)
Query: 104 AEQSDSKDTLLQEEVNECKDEKIVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAML 163
A SK + +E VN K EK +K T KG A +DP ++ S HV +K ++ A L
Sbjct: 502 APSKKSKGAVKEEGVN--KSEKRMKLTLKGGAAVDP--DSGLEHSAHVLEKGGKVFSATL 557
Query: 164 NQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVG-MKGQDKIFGPYNLQDTAINEFEQ 222
++ N +Y +QLLESD Y ++ WGRVG + G +K+ + +D A+ F +
Sbjct: 558 GLVDIVKGTNSYYKLQLLESDKESRYWIFRSWGRVGTVIGSNKLEQMPSKED-AVEHFMK 616
Query: 223 KFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQP-RNTKLEP 281
+ KT N W + + FT YPK + LE+DY Q EE+V + ++P +KL
Sbjct: 617 LYEEKTGNAW-HSKNFTKYPKKFYPLEIDY--GQDEEAV------KKLAVKPGTKSKLPK 667
Query: 282 CVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKRIADVI-HPPDRR 340
V + + +I ++ MK+ ++E + K+PLGKLS+ I Y +L + +
Sbjct: 668 PVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSRRQIQAAYSILSEVQQAVSQGSSES 727
Query: 341 KLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLEDDTEIQ 400
++ +LS FYT+IPHDFG KK +++ ++ K+EM++ L +IEVA LL ++
Sbjct: 728 QILDLSNRFYTLIPHDFGMKKPP--LLNNTDSVQAKVEMLDNLLDIEVAYSLLRGGSDDS 785
Query: 401 A-DPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGET 459
+ DP+ +Y++L + ++ DS E +I Y+ NTHA TH+AY ++++ IF++EREGE+
Sbjct: 786 SKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGES 845
Query: 460 ERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKS 519
+R+ K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKS
Sbjct: 846 QRY-KPFRQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKS 904
Query: 520 ANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAET 579
ANYC+ S G++LL EVALG+M EL +A++ KLP GK S KG+G+TAPDP + T
Sbjct: 905 ANYCHTSQGDPIGLILLGEVALGNMYELKHASH-ISKLPKGKHSVKGLGKTAPDPSASIT 963
Query: 580 LEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
L DGV VPLG + LLYNEYIVY + Q+ ++Y++++ F +K
Sbjct: 964 L-DGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFK 1010
>sp|P31669|PARP1_XENLA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis
GN=parp1 PE=2 SV=1
Length = 998
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/518 (42%), Positives = 310/518 (59%), Gaps = 21/518 (4%)
Query: 114 LQEEVNECKDEKIVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAMLNQTNVGDNNN 173
++EE K EK +K T KG A +DP ++ S HV + I+ A L ++ N
Sbjct: 493 VKEEKGSNKSEKKMKLTVKGGAAIDP--DSELEDSCHVLETGGKIFSATLGLVDITRGTN 550
Query: 174 KFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGPYNLQDTAINEFEQKFFAKTKNHWS 233
+Y +QL+E D Y V+ WGRVG K + ++ AI F + KT N W
Sbjct: 551 SYYKLQLIEHDRDSRYWVFRSWGRVGTVIGSKKLEEMSSKEDAIEHFLNLYQDKTGNAW- 609
Query: 234 NRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQPRNTKLEPCVAKFISLICNI 293
+ FT YPK + LE+DY +EE VV + +KL V + I LI ++
Sbjct: 610 HSPNFTKYPKKFYPLEIDYG---QEEDVVKKLSVGAGT----KSKLAKPVQELIKLIFDV 662
Query: 294 SMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKRIADVIHPP-DRRKLEELSGEFYTV 352
MK+ M+E + K+PLGKLSK I Y +L ++ + +L +LS +FYT+
Sbjct: 663 ESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILSQVQQAVSESLSEARLLDLSNQFYTL 722
Query: 353 IPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLE---DDTEIQADPLYSHYQ 409
IPHDFG KK +++ + ++ K++M++ L +IEVA LL DD E DP+ Y+
Sbjct: 723 IPHDFGMKKPP--LLNNLEYIQAKVQMLDNLLDIEVAYSLLRGGADDGE--KDPIDVKYE 778
Query: 410 RLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNS 469
++ + + DS E +I +Y+ NTHA TH+AY +++++IF+++REGE +R+ K F
Sbjct: 779 KIKTDIKVVAKDSEESRIICDYVKNTHADTHNAYDLEVLEIFKIDREGEYQRY-KPFKQL 837
Query: 470 KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSA 529
NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+A P +
Sbjct: 838 HNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHAMPGS 897
Query: 530 TAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLG 589
G++LL EVALG+M EL A+ KLP GK S KG+G+TAPDP L DGV VPLG
Sbjct: 898 PIGLILLGEVALGNMHELKAAS-QITKLPKGKHSVKGLGRTAPDPSATVQL-DGVDVPLG 955
Query: 590 KPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
K S LLYNEYIVY + Q+ ++Y++++ F YK
Sbjct: 956 KGTSANISDTSLLYNEYIVYDIAQVNLKYLLKLKFNYK 993
>sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4
Length = 1014
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/523 (42%), Positives = 317/523 (60%), Gaps = 23/523 (4%)
Query: 109 SKDTLLQEEVNECKDEKIVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAMLNQTNV 168
SK + +E +N K EK +K T KG A +DP ++ S HV +K ++ A L ++
Sbjct: 507 SKGQVKEEGIN--KSEKRMKLTLKGGAAVDP--DSGLEHSAHVLEKGGKVFSATLGLVDI 562
Query: 169 GDNNNKFYVIQLLESDGGGEYMVYNRWGRVG-MKGQDKIFGPYNLQDTAINEFEQKFFAK 227
N +Y +QLLE D Y ++ WGRVG + G +K+ + +D AI F + + K
Sbjct: 563 VKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKED-AIEHFMKLYEEK 621
Query: 228 TKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQP-RNTKLEPCVAKF 286
T N W + + FT YPK + LE+DY Q EE+V + + P +KL V
Sbjct: 622 TGNAW-HSKNFTKYPKKFYPLEIDY--GQDEEAV------KKLTVNPGTKSKLPKPVQDL 672
Query: 287 ISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKRIADVI-HPPDRRKLEEL 345
I +I ++ MK+ M+E + K+PLGKLSK I Y +L + + ++ +L
Sbjct: 673 IKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILDL 732
Query: 346 SGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLEDDTEIQA-DPL 404
S FYT+IPHDFG KK +++ ++ K+EM++ L +IEVA LL ++ + DP+
Sbjct: 733 SNRFYTLIPHDFGMKKPP--LLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPI 790
Query: 405 YSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRK 464
+Y++L + ++ DS E +I Y+ NTHA TH+AY ++++ IF++EREGE +R+ K
Sbjct: 791 DVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREGECQRY-K 849
Query: 465 QFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCY 524
F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+
Sbjct: 850 PFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCH 909
Query: 525 ASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGV 584
S G++LL EVALG+M EL +A++ KLP GK S KG+G+T PDP +L DGV
Sbjct: 910 TSQGDPIGLILLGEVALGNMYELKHASH-ISKLPKGKHSVKGLGKTTPDPSANISL-DGV 967
Query: 585 IVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
VPLG + LLYNEYIVY + Q+ ++Y++++ F +K
Sbjct: 968 DVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLLKLKFNFK 1010
>sp|Q9R152|PARP1_CRIGR Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2
SV=3
Length = 1013
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/528 (41%), Positives = 321/528 (60%), Gaps = 23/528 (4%)
Query: 104 AEQSDSKDTLLQEEVNECKDEKIVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAML 163
A SK +E VN K EK +K T KG A +DP ++ S HV +K ++ A L
Sbjct: 501 APSKKSKGLYKEEGVN--KSEKRMKLTLKGGAAVDP--DSGLEHSAHVLEKGGKVFSATL 556
Query: 164 NQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVG-MKGQDKIFGPYNLQDTAINEFEQ 222
++ N +Y +QLLE D Y ++ WGRVG + G +K+ + +D A+ F +
Sbjct: 557 GLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVGTVIGSNKLEQMPSKED-AVEHFMK 615
Query: 223 KFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQP-RNTKLEP 281
+ KT N W + + FT YPK + LE+DY Q EE+V + ++P +KL
Sbjct: 616 LYEEKTGNAW-HSKNFTKYPKKFYPLEIDY--GQDEEAV------KKLTVKPGTKSKLPK 666
Query: 282 CVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKRIADVI-HPPDRR 340
V + + +I ++ MK+ ++E + K+PLGKLSK I Y +L + +
Sbjct: 667 AVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDS 726
Query: 341 KLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLEDDTEIQ 400
++ +LS FYT+IPHDFG KK +++ ++ K+EM++ L +IEVA LL ++
Sbjct: 727 QILDLSNRFYTLIPHDFGMKKPP--LLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDS 784
Query: 401 A-DPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGET 459
+ DP+ +Y++L + ++ DS E +I Y+ NTHA TH+AY ++++ IF++EREGE+
Sbjct: 785 SKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVMDIFKIEREGES 844
Query: 460 ERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKS 519
+R+ K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKS
Sbjct: 845 QRY-KPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKS 903
Query: 520 ANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAET 579
ANYC+ S G++LL EVALG+M EL +A++ KLP GK S KG+G+T PDP + T
Sbjct: 904 ANYCHTSQGDPIGLILLGEVALGNMYELKHASH-ISKLPKGKHSVKGLGKTTPDPSASIT 962
Query: 580 LEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
LE GV VPLG + LLYNEYIVY + Q+ ++Y++++ F +K
Sbjct: 963 LE-GVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFK 1009
>sp|P11103|PARP1_MOUSE Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3
Length = 1013
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 241/641 (37%), Positives = 360/641 (56%), Gaps = 58/641 (9%)
Query: 8 DQLRAKLAQRG--LSTAGTKAILVQRLEEAVEEENKKSVGSKKRGRECDETD-------- 57
D+ +A + + G L+ + KA L +++ VE+ NKK K+ D
Sbjct: 406 DEAKAVIEKLGGKLTGSANKASLCISIKKEVEKMNKKMEEVKEANIRVVSEDFLQDVSAS 465
Query: 58 SNGSQKVKSIESFGQMGVKQLREQADL---RGLSKAGTKKELLERLCNHAEQSDSKDTLL 114
+ Q + S S G + E ++ RG S A +KK SK
Sbjct: 466 TKSLQDLLSAHSLSPWGAEVKAEPGEVVAPRGKSAAPSKK--------------SKGCFK 511
Query: 115 QEEVNECKDEKIVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAMLNQTNVGDNNNK 174
+E VN K EK +K T KG A +DP ++ S HV +K ++ A L ++ N
Sbjct: 512 EEGVN--KSEKRMKLTLKGGAAVDP--DSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNS 567
Query: 175 FYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGPYNLQ-----DTAINEFEQKFFAKTK 229
+Y +QLLE D Y ++ WGR+G + G L+ + A+ +F + + KT
Sbjct: 568 YYKLQLLEDDKESRYWIFRSWGRLGT-----VIGSNKLEQMPSKEEAVEQFMKLYEEKTG 622
Query: 230 NHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQP-RNTKLEPCVAKFIS 288
N W + + FT YPK + LE+DY Q EE+V + ++P +KL V + +
Sbjct: 623 NAW-HSKNFTKYPKKFYPLEIDY--GQDEEAV------KKLTVKPGTKSKLPKPVQELVG 673
Query: 289 LICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKRIAD-VIHPPDRRKLEELSG 347
+I ++ MK+ ++E + K+PLGKLS+ I Y +L + V ++ +LS
Sbjct: 674 MIFDVDSMKKALVEYEIDLQKMPLGKLSRRQIQAAYSILSEVQQPVSQGSSESQILDLSN 733
Query: 348 EFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLEDDTEIQA-DPLYS 406
FYT+IPHDFG KK +++ ++ K+EM++ L +IEVA LL ++ + DP+
Sbjct: 734 RFYTLIPHDFGMKKPP--LLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDV 791
Query: 407 HYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQF 466
+Y++L + ++ DS E +I Y+ NTHA TH+AY ++++ IF++EREGE++R+ K F
Sbjct: 792 NYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGESQRY-KPF 850
Query: 467 SNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYAS 526
NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+ S
Sbjct: 851 RQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTS 910
Query: 527 PSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIV 586
G+++L EVALG+M EL +A++ KLP GK S KG+G+T PDP + TLE GV V
Sbjct: 911 QGDPIGLIMLGEVALGNMYELKHASH-ISKLPKGKHSVKGLGKTTPDPSASITLE-GVEV 968
Query: 587 PLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
PLG + LLYNEYIVY + Q+ ++Y++++ F +K
Sbjct: 969 PLGTGIPSGVNDTALLYNEYIVYDIAQVNLKYLLKLKFNFK 1009
>sp|P18493|PARP1_BOVIN Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2
Length = 1016
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/528 (41%), Positives = 316/528 (59%), Gaps = 23/528 (4%)
Query: 104 AEQSDSKDTLLQEEVNECKDEKIVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAML 163
A SK + +E N K EK +K T KG A +DP ++ + HV +K ++ A L
Sbjct: 504 APSKKSKGPVKEEGTN--KSEKRMKLTLKGGAAVDP--DSGLEHNAHVLEKGGKVFSATL 559
Query: 164 NQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVG-MKGQDKIFGPYNLQDTAINEFEQ 222
++ N +Y +QLLE D Y ++ WGRVG + G +K+ + +D AI F +
Sbjct: 560 GLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVGTVIGSNKLEQMPSKED-AIEHFMK 618
Query: 223 KFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQP-RNTKLEP 281
+ KT N W + + FT +PK + LE+DY Q EE+V + + P +KL
Sbjct: 619 LYEEKTGNAW-HSKNFTKHPKKFYPLEIDY--GQDEEAV------KKLTVNPGTKSKLPK 669
Query: 282 CVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKRIADVI-HPPDRR 340
V I +I ++ MK+ M+E + K+PLGKLSK I Y +L + +
Sbjct: 670 PVQNLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQALSQGSSDS 729
Query: 341 KLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLEDDTEIQ 400
+ +LS FYT+IPHDFG KK +++ ++ K+EM++ L +IEVA LL ++
Sbjct: 730 HILDLSNRFYTLIPHDFGMKKPP--LLNNANSVQAKVEMLDNLLDIEVAYSLLRGGSDDS 787
Query: 401 A-DPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGET 459
+ DP+ +Y++L + ++ DS E +I Y+ NTHA TH+AY +++V IF++EREGE+
Sbjct: 788 SKDPIDVNYEKLKTDIKVVDKDSEEAEIIRKYVKNTHATTHNAYDLEVVDIFKIEREGES 847
Query: 460 ERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKS 519
+R+ K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKS
Sbjct: 848 QRY-KPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKS 906
Query: 520 ANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAET 579
ANYC+ S G++LL E ALG+M EL +A + KLP GK S KG+G+T PDP + T
Sbjct: 907 ANYCHTSQGDPIGLILLGEAALGNMYELKHARH-ISKLPKGKHSVKGLGKTTPDPSASIT 965
Query: 580 LEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
+ DGV VPLG + LLYNEYIVY + Q+ ++Y++++ F +K
Sbjct: 966 V-DGVEVPLGTGISSGVNDTCLLYNEYIVYDIAQVHLKYLLKLKFNFK 1012
>sp|Q11208|PARP_SARPE Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1
Length = 996
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/483 (42%), Positives = 299/483 (61%), Gaps = 20/483 (4%)
Query: 150 HVF-QKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMK-GQDKIF 207
HV+ ++ + Y+ +L T++ N N FY +QLLESD + V+ WGR+G G +K+
Sbjct: 529 HVYVSRNKEKYNVVLGITDIQKNKNSFYKLQLLESDMKNRFWVFRSWGRIGTTIGGNKLD 588
Query: 208 GPYNLQDTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQK-EESVVHEKP 266
NL D AI +F++ + K+ NH+ NR F +++DY+ + K + S H+
Sbjct: 589 NFSNLVD-AIVQFKELYLEKSGNHFENRENFVKVAGRMYPIDIDYAEDSKIDLSAEHD-- 645
Query: 267 NSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDV 326
+KL V I L+ ++ MK+ MME + K+PLGKLS+ I Y V
Sbjct: 646 --------IKSKLPLSVQDIIKLMFDVDSMKRTMMEFDLDMEKMPLGKLSQKQIQSAYKV 697
Query: 327 LKRIADVIHPPDRR-KLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGE 385
L I ++I K + + FYT+IPH+FG + ++DT ++++ +M+++L E
Sbjct: 698 LTEIYELIQGGGTNAKFIDATNRFYTLIPHNFGTQSPP--LLDTTEQVEQLRQMLDSLIE 755
Query: 386 IEVATKLLE-DDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYS 444
IE A LL+ +D++ +P+ HY++L +L PL+ +S E+ L+ Y+ NTHA+TH Y
Sbjct: 756 IECAYSLLQTEDSKADINPIDKHYEQLKTKLEPLDKNSEEYILLQKYVKNTHAETHKLYD 815
Query: 445 VDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGY 504
+++V IF+V R+GE R+ K F NR LLWHGSRLTN+ GILS GL+IAPPEAP TGY
Sbjct: 816 LEVVDIFKVARQGEARRY-KPFKKLHNRRLLWHGSRLTNFAGILSHGLKIAPPEAPVTGY 874
Query: 505 MFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLST 564
MFGKG+YFADM SKSANYC S + G++LL EVALGDM E A Y KLP+ K S
Sbjct: 875 MFGKGIYFADMVSKSANYCCTSHHNSTGLMLLSEVALGDMMECTAAKY-VTKLPNDKHSC 933
Query: 565 KGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNF 624
G G+T P+P E+ EDGV +PLGKP + K LLYNE+I+Y + Q+ ++Y++++NF
Sbjct: 934 FGRGRTMPNPSESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIYDIAQVNIQYMLRMNF 993
Query: 625 KYK 627
KYK
Sbjct: 994 KYK 996
>sp|P26446|PARP1_CHICK Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2
Length = 1011
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/517 (43%), Positives = 315/517 (60%), Gaps = 19/517 (3%)
Query: 114 LQEEVNECKDEKIVKATKKGAAVLDPWLPEHIKISYHVFQKDNDIYDAMLNQTNVGDNNN 173
++EE K EK +K T KG A +DP ++ S HVF+K I+ A L ++ N
Sbjct: 507 VKEEQGPSKSEKKMKLTVKGGAAVDP--DSGLEDSAHVFEKGGKIFSATLGLVDIVKGTN 564
Query: 174 KFYVIQLLESDGGGEYMVYNRWGRVG-MKGQDKIFGPYNLQDTAINEFEQKFFAKTKNHW 232
+Y +QLLE D Y V+ WGRVG + G +K+ + +D A+ F + KT N W
Sbjct: 565 SYYKLQLLEDDRESRYWVFRSWGRVGTVIGSNKLEQMPSKED-AVEHFLNLYEEKTGNSW 623
Query: 233 SNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQPRNTKLEPCVAKFISLICN 292
+ + FT YPK + LE+DY Q EE+V T++ + +KL + I +I +
Sbjct: 624 -HSKNFTKYPKKFYPLEIDY--GQDEEAV----RKLTVSAGTK-SKLAKPIQDLIKMIFD 675
Query: 293 ISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKRIADVIHPP-DRRKLEELSGEFYT 351
+ MK+ M+E + K+PLGKLSK I Y +L + + ++ +LS FYT
Sbjct: 676 VESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILNEVQQAVSDGGSESQILDLSNRFYT 735
Query: 352 VIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEVATKLLEDDTEI-QADPLYSHYQR 410
+IPHDFG KK ++ + ++ K++M++ L +IEVA LL E DP+ +Y++
Sbjct: 736 LIPHDFGMKKPP--LLSNLEYIQAKVQMLDNLLDIEVAYSLLRGGNEDGDKDPIDINYEK 793
Query: 411 LHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSK 470
L + ++ DS E +I Y+ NTHA TH+AY + +V+IFR+EREGE++R+ K F
Sbjct: 794 LRTDIKVVDKDSEEAKIIKQYVKNTHAATHNAYDLKVVEIFRIEREGESQRY-KPFKQLH 852
Query: 471 NRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSAT 530
NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+ S +
Sbjct: 853 NRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQADP 912
Query: 531 AGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGK 590
G++LL EVALG+M EL A++ KLP GK S KG+G+TAPDP TL DGV VPLG
Sbjct: 913 IGLILLGEVALGNMYELKNASH-ITKLPKGKHSVKGLGKTAPDPTATTTL-DGVEVPLGN 970
Query: 591 PKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 627
+ LLYNEYIVY V Q+ ++Y++++ F YK
Sbjct: 971 GISTGINDTCLLYNEYIVYDVAQVNLKYLLKLKFNYK 1007
>sp|P35875|PARP_DROME Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp
PE=2 SV=1
Length = 994
Score = 359 bits (922), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/479 (41%), Positives = 287/479 (59%), Gaps = 15/479 (3%)
Query: 150 HVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGP 209
HV+ N+ Y +L T++ N N +Y +QLL++D +Y ++ WGR+G +
Sbjct: 527 HVYVDSNNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEE 586
Query: 210 YNLQDTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNST 269
++ ++A F++ + KT N + R F +E+ Y +QK V HE T
Sbjct: 587 FDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQK--LVKHESHFFT 644
Query: 270 INIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDVLKR 329
+KLE V I LI +I M + +ME + +K+PLGKLS I Y V+K
Sbjct: 645 -------SKLEISVQNLIKLIFDIDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKE 697
Query: 330 IADVIHP-PDRRKLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALGEIEV 388
I +V+ + KL + + FYT+IPH+FG + +I+T Q+++ +M+++L EIEV
Sbjct: 698 IYNVLECGSNTAKLIDATNRFYTLIPHNFGVQ--LPTLIETHQQIEDLRQMLDSLAEIEV 755
Query: 389 ATKLLE-DDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDI 447
A +++ +D +PL +HY ++ QL L+ +S EFS+++ Y+ NTHA TH +Y + I
Sbjct: 756 AYSIIKSEDVSDACNPLDNHYAQIKTQLVALDKNSEEFSILSQYVKNTHASTHKSYDLKI 815
Query: 448 VQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFG 507
V +F+V R+GE RF K F NR LLWHGSRLTN+ GILS GLRIAPPEAP TGYMFG
Sbjct: 816 VDVFKVSRQGEARRF-KPFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYMFG 874
Query: 508 KGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGV 567
KG+YFADM SKSANYC S + G++LL EVALGDM E A Y +KL + K S G
Sbjct: 875 KGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECTSAKY-INKLSNNKHSCFGR 933
Query: 568 GQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKY 626
G+T PDP ++ DGV +P G+ + K LLYNEYIVY V Q+ ++Y+ ++ FKY
Sbjct: 934 GRTMPDPTKSYIRSDGVEIPYGETITDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFKY 992
>sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica
GN=PARP1 PE=2 SV=1
Length = 977
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 193/492 (39%), Positives = 291/492 (59%), Gaps = 35/492 (7%)
Query: 150 HVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGP 209
H+ + IY+ LN +++ N +Y++Q++E D G + V+ +WGRVG ++ G
Sbjct: 506 HILEDGKSIYNTTLNMSDLTRGVNSYYILQVIEEDNGSDCYVFRKWGRVG----NEKIGG 561
Query: 210 YNLQDT----AINEFEQKFFAKTKNHWSNRRQFTSY---PKCYTWLEMDYSANQKEESVV 262
L++ AI EF + F KT N W Q T++ P + L++DY Q +
Sbjct: 562 TKLEEMSKIHAIQEFRRLFLEKTGNPWEAWEQKTNFQKQPGKFYPLDIDYGVRQGPKRK- 620
Query: 263 HEKPNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILK 322
+I + L P + + ++++ NI + M+E N +++PLGKLSK I K
Sbjct: 621 --------DIDKMKSSLPPQLLELMNMLFNIETYRAAMLEFKINMSEMPLGKLSKENIQK 672
Query: 323 GYDVLKRIADVIHPPDRRKL---EEL----SGEFYTVIPHDFGFKKMRDFVIDTPQKLKL 375
G++ L I +++ + ++L E L S F+T+IP + +I L +
Sbjct: 673 GFEALTEIQNLLGNTNNQELAVRESLIVAASNRFFTLIP------SIHPHIIQDEDDLMV 726
Query: 376 KLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNT 435
K++M+EAL +IE+A+KL+ D++ + L Y++L C +TPL D ++ L+ YLLNT
Sbjct: 727 KVKMLEALQDIEIASKLVGFDSD-NDESLDDKYKKLRCAITPLPHDCEDYKLVEKYLLNT 785
Query: 436 HAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIA 495
HA TH +S+++ ++F ++R+GE ++ + +N N+MLLWHGSRLTN+ GILSQGLRIA
Sbjct: 786 HAPTHKEWSLELEEVFSLDRDGEFSKYSRYKNNLHNKMLLWHGSRLTNYVGILSQGLRIA 845
Query: 496 PPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYANYDAD 555
PPEAP TGYMFGKG+YFAD+ SKSA YCY G++LL EVALGDM EL A D
Sbjct: 846 PPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRKNPVGLMLLSEVALGDMYELKKAT-SMD 904
Query: 556 KLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIR 615
K P GK STKG+G+T P E D V+VP GKP L+YNEYIVY+ Q++
Sbjct: 905 KPPRGKHSTKGLGKTVPLESEFAKWRDDVVVPCGKPVPASIKTSELMYNEYIVYNTSQVK 964
Query: 616 MRYVVQVNFKYK 627
M+Y+++V F +K
Sbjct: 965 MQYLLKVRFHHK 976
>sp|Q9ZP54|PARP1_ARATH Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1
PE=1 SV=2
Length = 983
Score = 349 bits (896), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 190/499 (38%), Positives = 294/499 (58%), Gaps = 36/499 (7%)
Query: 141 LPEHIKISYHVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGM 200
L EH H+ + N IY+ L+ +++ N +Y++Q+++ D G + V+ +WGRVG
Sbjct: 508 LQEHC----HILEDGNSIYNTTLSMSDLSTGINSYYILQIIQEDKGSDCYVFRKWGRVG- 562
Query: 201 KGQDKIFG---PYNLQDTAINEFEQKFFAKTKNHWSNRRQFTSY---PKCYTWLEMDYSA 254
+KI G + A++EF++ F KT N W + Q T++ P + L++DY
Sbjct: 563 --NEKIGGNKVEEMSKSDAVHEFKRLFLEKTGNTWESWEQKTNFQKQPGKFLPLDIDYGV 620
Query: 255 NQKEESVVHEKPNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGK 314
N++ V ++P T ++ L P + + + ++ ++ + MME N +++PLGK
Sbjct: 621 NKQ---VAKKEPFQT------SSNLAPSLIELMKMLFDVETYRSAMMEFEINMSEMPLGK 671
Query: 315 LSKSTILKGYDVLKRIADVIHPPDRRK------LEELSGEFYTVIPHDFGFKKMRDFVID 368
LSK I KG++ L I ++ D + L + S F+T+IP + +I
Sbjct: 672 LSKHNIQKGFEALTEIQRLLTESDPQPTMKESLLVDASNRFFTMIP------SIHPHIIR 725
Query: 369 TPQKLKLKLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLI 428
K K++M+EAL +IE+A++++ D + + L Y++LHC ++PL DS ++ LI
Sbjct: 726 DEDDFKSKVKMLEALQDIEIASRIVGFDVD-STESLDDKYKKLHCDISPLPHDSEDYRLI 784
Query: 429 ANYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGIL 488
YL THA TH+ +S+++ ++F +EREGE +++ N+MLLWHGSRLTN+ GIL
Sbjct: 785 EKYLNTTHAPTHTEWSLELEEVFALEREGEFDKYAPHREKLGNKMLLWHGSRLTNFVGIL 844
Query: 489 SQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELL 548
+QGLRIAPPEAPATGYMFGKG+YFAD+ SKSA YCY G++LL EVALG++ EL
Sbjct: 845 NQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTCKKNPVGLMLLSEVALGEIHELT 904
Query: 549 YANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIV 608
A Y DK P GK STKG+G+ P E V VP GKP L+YNEYIV
Sbjct: 905 KAKY-MDKPPRGKHSTKGLGKKVPQDSEFAKWRGDVTVPCGKPVSSKVKASELMYNEYIV 963
Query: 609 YSVDQIRMRYVVQVNFKYK 627
Y Q++++++++V FK+K
Sbjct: 964 YDTAQVKLQFLLKVRFKHK 982
>sp|Q9ZSV1|PARP1_MAIZE Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1
Length = 980
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 288/492 (58%), Gaps = 35/492 (7%)
Query: 150 HVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGP 209
H+ + IY+A LN +++ N +YV+Q++E D G E V+ +WGRVG +KI G
Sbjct: 509 HILEDGKSIYNATLNMSDLALGVNSYYVLQIIEQDDGSECYVFRKWGRVG---SEKI-GG 564
Query: 210 YNLQDT----AINEFEQKFFAKTKNHWSN---RRQFTSYPKCYTWLEMDYSANQKEESVV 262
L++ AI EF++ F KT N W + F P + L++DY V
Sbjct: 565 QKLEEMSKTEAIKEFKRLFLEKTGNSWEAWECKTNFRKQPGRFYPLDVDYG--------V 616
Query: 263 HEKPNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILK 322
+ P +I + L P + + + ++ N+ + MME N +++PLGKLSK I K
Sbjct: 617 KKAPKRK-DISEMKSSLAPQLLELMKMLFNVETYRAAMMEFEINMSEMPLGKLSKENIEK 675
Query: 323 GYDVLKRIADVIHPPDRRKL---EEL----SGEFYTVIPHDFGFKKMRDFVIDTPQKLKL 375
G++ L I +++ + L E L S F+T+IP + +I L +
Sbjct: 676 GFEALTEIQNLLKDTADQALAVRESLIVAASNRFFTLIPS------IHPHIIRDEDDLMI 729
Query: 376 KLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNT 435
K +M+EAL +IE+A+K++ + L Y +LHC +TPL DS ++ LI YLLNT
Sbjct: 730 KAKMLEALQDIEIASKIV-GFDSDSDESLDDKYMKLHCDITPLAHDSEDYKLIEQYLLNT 788
Query: 436 HAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIA 495
HA TH +S+++ ++F ++R+GE ++ + +N N+MLLWHGSRLTN+ GILSQGLRIA
Sbjct: 789 HAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLWHGSRLTNFVGILSQGLRIA 848
Query: 496 PPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYANYDAD 555
PPEAP TGYMFGKG+YFAD+ SKSA YCY + G++LL EVALGDM EL A D
Sbjct: 849 PPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRNNPVGLMLLSEVALGDMYELKKAT-SMD 907
Query: 556 KLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIR 615
K P GK STKG+G+T P E D V+VP GKP L+YNEYIVY+ Q++
Sbjct: 908 KPPRGKHSTKGLGKTVPLESEFVKWRDDVVVPCGKPVPSSIRSSELMYNEYIVYNTSQVK 967
Query: 616 MRYVVQVNFKYK 627
M+++++V F +K
Sbjct: 968 MQFLLKVRFHHK 979
>sp|Q9N4H4|PME1_CAEEL Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans
GN=pme-1 PE=2 SV=1
Length = 945
Score = 318 bits (816), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 189/492 (38%), Positives = 280/492 (56%), Gaps = 31/492 (6%)
Query: 150 HVFQK--DNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIF 207
HVF+ D +Y A L+ T++ N N +Y IQLL+ D Y V+ WGRVG +
Sbjct: 466 HVFKNEIDGSLYQATLSFTDLTQNKNSYYKIQLLKDDQRENYYVFRSWGRVGTEVGGNKH 525
Query: 208 GPYNLQDTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPN 267
Y+ + AI +F+ F KTKN W R+ F P ++++E DYS E + +
Sbjct: 526 ESYSNSNEAILKFQDVFHEKTKNDWIYRKHFRKMPGMFSYVETDYS----EFAQI----- 576
Query: 268 STINIQPRNTKLEP-CVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDV 326
+ I P + L P V + + I ++ MK + + NK+PLG+LS + I ++V
Sbjct: 577 TDTEITPGSKTLLPKSVKEVVMSIFDVENMKSALKSFEMDVNKMPLGRLSHNQINLAFEV 636
Query: 327 LKRIADVI--HPPDRRKLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMVEALG 384
L I+D++ P D ++ + S +FYT+IPH+FG + ID+ K+K K M+ AL
Sbjct: 637 LNDISDLLVKLPIDASRILDFSNKFYTIIPHNFGMRVPEP--IDSFHKIKEKNNMLNALL 694
Query: 385 EIEVATKLLED-----DTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAKT 439
+I+ A + T + DP+ +YQ+L C + PL+ ++++I YL NTH T
Sbjct: 695 DIKFAYDQISGGDVPASTSLGIDPVDINYQKLKCIMEPLQQGCDDWNMIHQYLKNTHGAT 754
Query: 440 HSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEA 499
H V+++ I ++ R+ E+ +F++ N R LLWHGS N+ GIL QGLRIAPPEA
Sbjct: 755 HD-LKVELIDILKLNRDNESSKFKRHIGN---RRLLWHGSGKMNFAGILGQGLRIAPPEA 810
Query: 500 PATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYA-NYDADKLP 558
P +GYMFGKGVYFADMFSKS YC A+ A LLLC+VALG++ +L+ + N LP
Sbjct: 811 PVSGYMFGKGVYFADMFSKSFFYCRANAKEEA-YLLLCDVALGNVQQLMASKNVSRQTLP 869
Query: 559 DGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKG----HLLYNEYIVYSVDQI 614
G S +G+G+ P + + DG +PLG QL K HLLYNE+IVY VDQI
Sbjct: 870 AGFQSVQGLGRQCPREIGSYNHPDGYTIPLGLTYMQLQGKQDVDYHLLYNEFIVYDVDQI 929
Query: 615 RMRYVVQVNFKY 626
+++Y+V+V +
Sbjct: 930 QLKYLVRVKMHH 941
>sp|Q9Y6F1|PARP3_HUMAN Poly [ADP-ribose] polymerase 3 OS=Homo sapiens GN=PARP3 PE=1 SV=3
Length = 533
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 185/503 (36%), Positives = 261/503 (51%), Gaps = 32/503 (6%)
Query: 137 LDPWLPEHIKISYHVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWG 196
+DP P V++ Y+ LNQTN+ +NNNKFY+IQLL+ D + +N WG
Sbjct: 48 VDPTCPLSSNPGTQVYED----YNCTLNQTNIENNNNKFYIIQLLQ-DSNRFFTCWNHWG 102
Query: 197 RVGMKGQDKIFGPYNLQDTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQ 256
RVG GQ KI L+D A +FE+KF KTKN+W+ R F S+P YT +E+
Sbjct: 103 RVGEVGQSKINHFTRLED-AKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEA 161
Query: 257 KEESV-VHEKPNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKL 315
+E V V P T+ + + L+P K I+ I + M K M + + K+PLGKL
Sbjct: 162 QEAVVKVDRGPVRTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKL 221
Query: 316 SKSTILKGYDVLKRIADVIHPPDR--RKLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKL 373
SK I +G++ L+ + + + P + LEELS FYTVIPH+FG + I++P+ L
Sbjct: 222 SKQQIARGFEALEALEEALKGPTDGGQSLEELSSHFYTVIPHNFGHSQPPP--INSPELL 279
Query: 374 KLKLEMVEALGEIEVATKL-----LEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLI 428
+ K +M+ L +IE+A L E E PL YQ L CQL L+ + E+ +I
Sbjct: 280 QAKKDMLLVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVI 339
Query: 429 ANYLLNTHAKTHSAYSVDIVQ-IFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGI 487
YL +T S + +Q I++V +EGE +RF+ S NR LLWHG+ + I
Sbjct: 340 QTYL----EQTGSNHRCPTLQHIWKVNQEGEEDRFQAH-SKLGNRKLLWHGTNMAVVAAI 394
Query: 488 LSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSAT--AGVLLLCEVALGDMS 545
L+ GLRI P +G GKG+YFA SKSA Y G + L EVALG
Sbjct: 395 LTSGLRI----MPHSGGRVGKGIYFASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREH 450
Query: 546 ELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLE-DG--VIVPLGKPKEQLN-SKGHL 601
+ N P G S G T PDP + LE DG V+VP G+P S
Sbjct: 451 HINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTF 510
Query: 602 LYNEYIVYSVDQIRMRYVVQVNF 624
+EY++Y Q R+RY+++V+
Sbjct: 511 SQSEYLIYQESQCRLRYLLEVHL 533
>sp|Q1SGF1|PARP3_MEDTR Putative poly [ADP-ribose] polymerase 3 OS=Medicago truncatula
GN=PARP3 PE=3 SV=1
Length = 799
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 31/494 (6%)
Query: 151 VFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVG--MKGQDKIFG 208
+F+KD +Y+ + + G N + V+QL+ ++ + + GRVG ++++
Sbjct: 312 IFEKDGILYNCAFSLCDQGRKLNDYCVMQLIVVPENSLHLYFKK-GRVGDDPSAEERLEE 370
Query: 209 PYNLQDTAINEFEQKFFAKTKNH---WSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEK 265
N+ D AI EF + F T N W ++F P + ++MD + ++ +
Sbjct: 371 CENV-DNAIKEFVRLFEEITGNEFESWEREKKFQKKPLKFYPIDMDDGVEVRHGALGLRQ 429
Query: 266 PNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYD 325
+ I + KLEP VA F+ ++C+ + K +ME+GY++ LP+G ++ + + +
Sbjct: 430 ----LGIAATHCKLEPMVANFMKVLCSQEIYKYALMEMGYDSPDLPIGMVTNLHLKRCEE 485
Query: 326 VLKRIADVIHPPDRRKLEELSGEFYTVIPHDFGFK------KMRDFVIDTPQKLK-LKLE 378
+L + + + L+E +G I DF K R F+ Q++
Sbjct: 486 ILLEFIEKV-----KTLKE-TGPKADAIWSDFSQKWFTLMHSTRPFIFRDYQEIADHAAA 539
Query: 379 MVEALGEIEVATKLLED-DTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHA 437
+E + +I +A+ L+ D DPL Y++L C +TPLE +S ++ +I YL T+
Sbjct: 540 ALEGVRDITLASHLIGDMSGSTIDDPLSDTYKKLGCSITPLEKNSNDYEMIVKYLEKTYE 599
Query: 438 KTHSA---YSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRI 494
Y V + IF VE N++LLW GSR +N L +G
Sbjct: 600 PVKVGDIEYGVSVENIFTVESSACPSY--ADIVKMPNKVLLWCGSRSSNLLRHLHKGFLP 657
Query: 495 APPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALG-DMSELLYANYD 553
A P GYMFGK + +D +++A Y + + G L+L +LG +++EL D
Sbjct: 658 AICSLPVPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITELKSPPED 717
Query: 554 ADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQ 613
L + K+ KG+G+ D E +D + VP G + L YNEY VY Q
Sbjct: 718 TTSLEEKKVGVKGLGKKKTDESEHFVWKDDIKVPCGSIIASEHEDSPLEYNEYAVYDPKQ 777
Query: 614 IRMRYVVQVNFKYK 627
+R+ Y+V V ++ K
Sbjct: 778 VRISYLVGVKYEEK 791
>sp|Q9SWB4|PARP3_SOYBN Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1
Length = 815
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 225/494 (45%), Gaps = 31/494 (6%)
Query: 151 VFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMK-GQDKIFGP 209
+F++D +Y+ + + G N + V+QL+ ++ + + GRVG ++
Sbjct: 325 IFERDGILYNCAFSVCDQGRGLNDYCVMQLIVVPENRLHLYFKK-GRVGDDPNAEERLEE 383
Query: 210 YNLQDTAINEFEQKFFAKTKNH---WSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKP 266
++ D A+ EF + F T N W ++F P + ++MD + ++ +
Sbjct: 384 WDNVDGALKEFVRLFEEITGNEFEPWEREKKFQKKPLKFYPIDMDDGIEVRHGALGLRQ- 442
Query: 267 NSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDV 326
+ I + KLEP VA F+ ++C+ + K +ME+GY+ LP+G ++ + K DV
Sbjct: 443 ---LGIAATHCKLEPLVANFMKVLCSQEIYKYALMEMGYDCPDLPIGMVTNLHLKKCEDV 499
Query: 327 LKRIADVIH------PPDRRKLEELSGEFYTVI--PHDFGFKKMRDFVIDTPQKLKLKLE 378
L D + P + S ++T++ F F+ ++ L
Sbjct: 500 LLEFIDKVKSLKETGPKAEAVWTDFSQRWFTLMHSTRPFNFRDYQEIADHAAAAL----- 554
Query: 379 MVEALGEIEVATKLLEDDT-EIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHA 437
E + +I A+ L+ D T DPL Y++L C ++ L+ S ++ +I YL T+
Sbjct: 555 --EGVRDITQASHLIGDMTGSTIDDPLSETYKKLGCSISALDKSSDDYEMIVKYLEKTYE 612
Query: 438 KTHSA---YSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRI 494
Y V + IF V+ G + N++LLW GSR +N L +G
Sbjct: 613 PVKVGDIEYGVSVENIFAVQTGGCPSY--EDIIKLPNKVLLWCGSRSSNLLRHLQKGFLP 670
Query: 495 APPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALG-DMSELLYANYD 553
A P GYMFGK + +D +++A Y + + G L+L +LG +++EL D
Sbjct: 671 AICSLPIPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITELKTPPED 730
Query: 554 ADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQ 613
A L + K+ KG G+ D E +D + VP GK + L YNEY VY +
Sbjct: 731 ASSLEEKKVGVKGPGKKKTDESEHFVWKDDIKVPCGKLVASDHQDSPLEYNEYAVYDKKR 790
Query: 614 IRMRYVVQVNFKYK 627
R+ Y+V V ++ K
Sbjct: 791 ARISYLVGVKYEEK 804
>sp|Q09525|PME2_CAEEL Poly(ADP-ribose) polymerase pme-2 OS=Caenorhabditis elegans
GN=pme-2 PE=2 SV=1
Length = 538
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 246/534 (46%), Gaps = 89/534 (16%)
Query: 159 YDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGPYNLQDTAIN 218
Y L +TN+ NNNKFY ++LL D GG+++V GR+G +G ++ ++ D A
Sbjct: 12 YKVHLCKTNIAQNNNKFYDMELL--DEGGDFIVKLINGRIGYRGVTQL-KDFDDLDRAKK 68
Query: 219 EFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQPRNTK 278
FE KF+ KT HW R P Y +E+ +A Q E+ V E+P + +NT+
Sbjct: 69 FFESKFYEKTHLHWEERDD-EPVPNKYAVVELATNARQTEKEVKKEEPEPEPKVDEKNTR 127
Query: 279 -----------------------LEPCVAKFISLICNISMMKQLMMEIGYN-ANKLPLGK 314
+ + + + IC+ + L+ ++ +N A P+
Sbjct: 128 GRKKRGIVKEKKEIKKEEEPVEEVNEKLKELMKCICDEDVHLGLLKQLKFNEAFGRPIDC 187
Query: 315 LSKSTILKGYDVLKRIADVIHPPDRRK---------------------LEELSGEFYTVI 353
LS + + GY++L +I + I R+ L +++ ++Y++I
Sbjct: 188 LSLAQLTTGYEILSKIEESIGGKSARRSTRGRPRVADRVLAVKSDGPSLHDIN-KYYSLI 246
Query: 354 PHDFGFKKMRDFVIDTPQKLKLKLEMVEAL-GEIEVATKLLEDDTEIQADPLYSH-YQRL 411
PH FGF ID+ K++ + E+++AL G IE + +L + + +Y Y+RL
Sbjct: 247 PHSFGF--CVPPKIDSHAKIQAERELLDALKGSIEASLELKDLKKTASSKDIYQRLYERL 304
Query: 412 HCQLTPLEVDSLEFSLIANYLLNTHAKTHSAYSVDIVQIFRVEREGET------------ 459
C L P+ S E + L TH Y + ++ F ++ E
Sbjct: 305 PCHLEPV---SEEIAGKIGDCLAMRGPTH-CYKLSLIDAFELKDPNEIPTEAPVEVQEVP 360
Query: 460 -ERFRKQFSNSK-------NRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVY 511
+R RK + + LLWHG+R+TN IL GL+ P G MFG GVY
Sbjct: 361 KKRGRKSTKTAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQF--PVGDRCGLMFGNGVY 418
Query: 512 FADMFSKSANYCYASPSATAGV-LLLCEVALGDMSELLYANYDADKLPD--GKLSTKGVG 568
FA++ +KSANYC P A+ V +LLCEV + L + DAD+ + K S G
Sbjct: 419 FANVPTKSANYC--CPEASKRVFMLLCEVETANPLVLYESEIDADEKMEKAKKTSVYAAG 476
Query: 569 QTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQV 622
+ P +T+E I E + + LLY+EY++++ + +++YVV+V
Sbjct: 477 KHTP----RDTVEINGIPAFKSNLETIEEETRLLYDEYVMFNKEHFKIKYVVEV 526
>sp|Q0E0Q3|PARP3_ORYSJ Poly [ADP-ribose] polymerase 3 OS=Oryza sativa subsp. japonica
GN=PARP3 PE=2 SV=1
Length = 831
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 230/504 (45%), Gaps = 50/504 (9%)
Query: 150 HVFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKI--- 206
H+++KD IY+ + ++G + N+ ++QL+ ++ Y + G G D++
Sbjct: 340 HIYEKDGIIYNCAFSVCDLGGDINQLCIMQLIMVPENHLHLYYKK----GPIGHDQMAEE 395
Query: 207 ----FGPYNLQDTAINEFEQKFFAKTKNH---WSNRRQFTSYPKCYTWLEMDYSANQKEE 259
FG + + AI EF + F T N W ++F L+MD + +
Sbjct: 396 RVEDFG--SRFNDAIKEFVRLFEEVTGNEFEPWEREKKFKKKCMKMYPLDMDDGVDVRHG 453
Query: 260 SVVHEKPNSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKST 319
V + + + KL+P V + +C+ + + + E+G++ LP+G L+
Sbjct: 454 GVALRQ----LGAAAAHCKLDPSVTFIMKQLCSQEIYRYALTEMGHDVPDLPIGMLTDLH 509
Query: 320 ILKGYD-VLKRIADVIHPPDRRKLE-----ELSGEFYTVIPHDF-----GFKKMRDFVID 368
+ +G + +L+ DV P+ E+S +++T+ P G++++ D V
Sbjct: 510 LKRGEETLLEWKQDVESAPESGPAADAFWMEISNKWFTLFPTTRPYTMKGYEQIADNVAS 569
Query: 369 TPQKLKLKLEMVEALGEIEVATKLLEDD-TEIQADPLYSHYQRLHCQLTPLEVDSLEFSL 427
+E + +I VA++L+ D DPL Y++L C + + DS ++ +
Sbjct: 570 G----------LETVRDINVASRLIGDVFGSTLDDPLSQCYKKLGCSINRVVEDSEDYKM 619
Query: 428 IANYLLNTHAKTHSA---YSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNW 484
I YL T+ YS + +I+ VE + N++LLW G+R +N
Sbjct: 620 ILKYLEKTYEPVKVGDVVYSATVERIYAVESSALPSY--DEIKKLPNKVLLWCGTRSSNL 677
Query: 485 TGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALG-D 543
L G A P GYMFGK + +D +++A Y + + G L+L +LG +
Sbjct: 678 LRHLRDGFVPAVCHIPVPGYMFGKAIVCSDAAAEAALYGFTAVDRPEGYLVLAVASLGKE 737
Query: 544 MSELL--YANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHL 601
+ E+ + D ++ + K+ KGVG+ DP E T DGV VP GK N G L
Sbjct: 738 IQEITGTPGSEDVKRMEEKKMGVKGVGRKTTDPSEHFTWRDGVTVPCGKLVPSTNKDGPL 797
Query: 602 LYNEYIVYSVDQIRMRYVVQVNFK 625
YNEY VY Q+ + ++V V ++
Sbjct: 798 EYNEYAVYDPKQVSIAFLVGVKYE 821
>sp|Q9FK91|PARP3_ARATH Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3
PE=2 SV=2
Length = 814
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 225/495 (45%), Gaps = 33/495 (6%)
Query: 151 VFQKDNDIYDAMLNQTNVGDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMK-GQDKIFGP 209
+F+KD +Y+ + ++G N++ ++QL+ M + R G+VG ++
Sbjct: 325 IFEKDGLLYNCAFSICDLGKGRNEYCIMQLVTVPDSNLNMYFKR-GKVGDDPNAEERLEE 383
Query: 210 YNLQDTAINEFEQKFFAKTKNH---WSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKP 266
+ ++ AI EF + F N W ++ P + ++MD + ++ +
Sbjct: 384 WEDEEAAIKEFARLFEEIAGNEFEPWEREKKIQKKPHKFFPIDMDDGIEVRSGALGLRQ- 442
Query: 267 NSTINIQPRNTKLEPCVAKFISLICNISMMKQLMMEIGYNANKLPLGKLSKSTILKGYDV 326
+ I + KL+ VA FI ++C + +ME+G + LP+G L+ + + +V
Sbjct: 443 ---LGIASAHCKLDSFVANFIKVLCGQEIYNYALMELGLDPPDLPMGMLTDIHLKRCEEV 499
Query: 327 LKRIADVIHPPDRRKLEELSGEFYTVIPHDFGFKKMRDFVIDTPQKLKLKLEMV------ 380
L + + K + +G+ + DF + P +L E+
Sbjct: 500 LLEFVEKV------KTTKETGQKAEAMWADFSSRWFSLMHSTRPMRLHDVNELADHAASA 553
Query: 381 -EALGEIEVATKLLED-DTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLNTHAK 438
E + +I A++L+ D + DPL Y++L C+++ ++ +S ++ ++ YL T+
Sbjct: 554 FETVRDINTASRLIGDMRGDTLDDPLSDRYKKLGCKISVVDKESEDYKMVVKYLETTYEP 613
Query: 439 THSA---YSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRIA 495
+ Y V + +F VE + N++LLW GSR +N + +G A
Sbjct: 614 VKVSDVEYGVSVQNVFAVESDAIPSL--DDIKKLPNKVLLWCGSRSSNLLRHIYKGFLPA 671
Query: 496 PPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALG-DMSELLYANYDA 554
P GYMFG+ + +D +++A Y + + G L+L +LG +++E D
Sbjct: 672 VCSLPVPGYMFGRAIVCSDAAAEAARYGFTAVDRPEGFLVLAVASLGEEVTEFTSPPEDT 731
Query: 555 DKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGK--PKEQLNSKGHLLYNEYIVYSVD 612
L D K+ KG+G+ + E D + VP G+ P E +S L YNEY VY
Sbjct: 732 KTLEDKKIGVKGLGRKKTEESEHFMWRDDIKVPCGRLVPSEHKDSP--LEYNEYAVYDPK 789
Query: 613 QIRMRYVVQVNFKYK 627
Q +R++V+V ++ K
Sbjct: 790 QTSIRFLVEVKYEEK 804
>sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenorhabditis elegans GN=pme-5
PE=2 SV=1
Length = 2276
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 226/515 (43%), Gaps = 94/515 (18%)
Query: 159 YDAMLNQTNV-----GDNNNKFYVIQLLESDGGGEYMVYNRWGRVGMKGQDKIFGPYNLQ 213
+D ++N+T++ G +N FY +Q+++ ++++ WGR+G + P+N
Sbjct: 1800 FDVLMNKTDLMYGRCGFHN--FYRMQIIKRRDAELFILFTNWGRIGSGMGEFQTTPFNSL 1857
Query: 214 DTAINEFEQKFFAKTKNHWSNRRQFTSYPKCYTWLEMDYSANQKEESVVHEKPNSTINIQ 273
+ A EF+ F +K+ N W+ F PK Y +E D + P S I+
Sbjct: 1858 ELAAKEFKSIFKSKSGNEWAPLANFRDMPKKYRLVETDST------------PTSLAEIE 1905
Query: 274 ---PRNTKLEPCVAKFISLICNISMMKQLMMEIG-YNANKLPLGKLSKSTILKGYDVL-- 327
+NT+ +P + + I+ I + +K ++ Y + P G+ +K I K VL
Sbjct: 1906 LTWKKNTEKDP-IRRMIADISDAKTLKTYASQVQMYGGSSQPFGRFTKENIEKAKLVLDK 1964
Query: 328 -----KRIADVIHPPDRR----------KLEELSGEFYTVIPH-DFGFKKMRDFVIDTPQ 371
RI ++ ELSG++Y++IP ++ F + +D +
Sbjct: 1965 LEKNANRIKQMVEAQTGVVESNLLDAYITTSELSGDYYSLIPSGEYEFSNLTR--LDNVE 2022
Query: 372 KLKLKLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQR--LHCQLTPLEVDSLEFSLIA 429
++ + EIE AT+LL E + D Y R + C+ DS +
Sbjct: 2023 EIARHRARLNRCQEIETATRLL-CAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLL 2081
Query: 430 NYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILS 489
++ N+ K + I + TE+F + F N N+ LWHG++ TN IL
Sbjct: 2082 QWIHNSGGK-----QAKVKMILEISPMLSTEKF-EPFVNDDNQKFLWHGTKATNLMSILK 2135
Query: 490 QGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGV--LLLCEVALGDMSEL 547
G I PP A G +FG G+Y AD F KS +YC PSA G+ +L+C+ ALG + L
Sbjct: 2136 NGFLIDPPSACKNGNLFGSGIYLADSFEKSTHYC--QPSA-GGINYMLVCQTALGKVRTL 2192
Query: 548 -----LYAN--------------YDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPL 588
Y N Y D+ P G L+ GVG PL +PL
Sbjct: 2193 DTIPYHYMNQSSSSAEKYEDTLHYIGDRFPAGSLTNDGVGM----PL----------LPL 2238
Query: 589 GK--PKEQLN-SKGHLLYNEYIVYSVDQIRMRYVV 620
K P + N G L ++EYIV + +++ +Y+V
Sbjct: 2239 RKRDPIQGSNYGFGTLDFSEYIVRNPNRVLPKYIV 2273
>sp|Q08824|PARP1_ONCMA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou
GN=parp1 PE=2 SV=2
Length = 135
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
Query: 376 KLEMVEALGEIEVATKLLEDDTEI-QADPLYSHYQRLHCQLTPLEVDSLEFSLIANYLLN 434
K+EM++ L +IEVA LL+ E + DP+ +Y++L ++ ++ + E +I Y+ N
Sbjct: 3 KVEMLDNLLDIEVAYSLLKGGAEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKN 62
Query: 435 THAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILSQGLRI 494
THA TH+ Y++ + +IF++ REGE +++R F + NR LLWHGSR TN+ GILSQGLRI
Sbjct: 63 THAATHNTYTLVVEEIFKIVREGEYQKYRP-FQDLPNRQLLWHGSRATNYAGILSQGLRI 121
Query: 495 APPEAPATGYMFGK 508
APPEAP TGYMFGK
Sbjct: 122 APPEAPVTGYMFGK 135
>sp|Q9UKK3|PARP4_HUMAN Poly [ADP-ribose] polymerase 4 OS=Homo sapiens GN=PARP4 PE=1 SV=3
Length = 1724
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 46/321 (14%)
Query: 311 PLGKLSKSTILKGYDVLKRI-ADVIHPPDRRKLEELSGEFYTVIPHDFGFKKMRDFVIDT 369
P+ ++S + + K +L + A + + +L+++ EFY +IPH K + +
Sbjct: 285 PVNRISLNDVSKAEGILLLVKAALKNGETAEQLQKMMTEFYRLIPHKGTMPKEVNLGL-- 342
Query: 370 PQKLKLKLEMVEALGEIEVATKLLEDDTEIQADPLYSHYQRLHCQLTPLEVDSLEFSLIA 429
L K ++ + + ++ + E + P + Y+ L C++ +E ++ EF +
Sbjct: 343 ---LAKKADLCQLIRDM---VNVCETNLSKPNPPSLAKYRALRCKIEHVEQNTEEFLRVR 396
Query: 430 NYLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKQFSNSKNRMLLWHGSRLTNWTGILS 489
+L H HS VD++QIFRV R ET F + N + L HGS + N GIL
Sbjct: 397 KEVLQNH---HSKSPVDVLQIFRVGRVNETTEFLSKLGNVRP---LLHGSPVQNIVGILC 450
Query: 490 QGLRIAPPEAPATGYM------FGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGD 543
+GL + P G G G+YF+D S S Y + + +LL+C+VALG
Sbjct: 451 RGL-LLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSIKYSHPGETDGTRLLLICDVALGK 509
Query: 544 MSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLY 603
+L ++ + P G S GV QTA + E
Sbjct: 510 CMDLHEKDFSLTEAPPGYDSVHGVSQTASVTTDFED------------------------ 545
Query: 604 NEYIVYSVDQIRMRYVVQVNF 624
+E++VY +Q++M+Y+++ +
Sbjct: 546 DEFVVYKTNQVKMKYIIKFSM 566
>sp|O55721|PARP_IIV6 Putative poly [ADP-ribose] polymerase-like 100L OS=Invertebrate
iridescent virus 6 GN=IIV6-100L PE=4 SV=1
Length = 181
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 449 QIFRVEREGETERFRKQFSNS--KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPA-TGYM 505
+I+ V+R E E F K S S K LL HG+R ++ IL GL+I P + +G +
Sbjct: 27 KIYTVQRFKEEEPFNKYISESVSKKTRLLIHGTRCSSVIPILQTGLKIRPSTSVHFSGKV 86
Query: 506 FGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYAN-YDADK 556
+G+G YF++ KS NY + +LL+ EV +G+ E +Y Y+ D+
Sbjct: 87 YGEGNYFSEHVQKSLNY---TGWDNDQILLIYEVHVGN--EYIYEGWYNGDR 133
>sp|O95271|TNKS1_HUMAN Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2
Length = 1327
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 74/195 (37%), Gaps = 54/195 (27%)
Query: 446 DIVQIFRVEREGETERF---RKQFS----NSKNRMLLWHGSRLTNWTGILSQGLRIAPPE 498
++++I +V + ERF +K+ S N N +L+HGS N I+ +G
Sbjct: 1146 NVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFIN--AIIHKGFD---ER 1200
Query: 499 APATGYMFGKGVYFADMFSKSANYCYASPSATAGV-------------LLLCEVALGDMS 545
G MFG G+YFA+ SKS Y Y T +L C V LG S
Sbjct: 1201 HAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGK-S 1259
Query: 546 ELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNE 605
L ++ P G S +G+P S L Y E
Sbjct: 1260 FLQFSTMKMAHAPPGHHSV-----------------------IGRP-----SVNGLAYAE 1291
Query: 606 YIVYSVDQIRMRYVV 620
Y++Y +Q Y++
Sbjct: 1292 YVIYRGEQAYPEYLI 1306
>sp|Q6PFX9|TNKS1_MOUSE Tankyrase-1 OS=Mus musculus GN=Tnks PE=1 SV=1
Length = 1320
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 74/195 (37%), Gaps = 54/195 (27%)
Query: 446 DIVQIFRVEREGETERF---RKQFS----NSKNRMLLWHGSRLTNWTGILSQGLRIAPPE 498
++++I +V + ERF +K+ S N N +L+HGS N I+ +G
Sbjct: 1139 NVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFIN--AIIHKGFD---ER 1193
Query: 499 APATGYMFGKGVYFADMFSKSANYCYASPSATAGV-------------LLLCEVALGDMS 545
G MFG G+YFA+ SKS Y Y T +L C V LG S
Sbjct: 1194 HAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGK-S 1252
Query: 546 ELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNE 605
L ++ P G S +G+P S L Y E
Sbjct: 1253 FLQFSTMKMAHAPPGHHSV-----------------------IGRP-----SVNGLAYAE 1284
Query: 606 YIVYSVDQIRMRYVV 620
Y++Y +Q Y++
Sbjct: 1285 YVIYRGEQAYPEYLI 1299
>sp|O74871|YCW3_SCHPO Uncharacterized protein C31H12.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC31H12.03c PE=1 SV=1
Length = 245
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 5 LKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVE 37
LKV +LR KLA++GLSTAG KA LV RL A E
Sbjct: 7 LKVAELREKLAEKGLSTAGNKAELVSRLTAATE 39
>sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1 SV=1
Length = 1166
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 26/141 (18%)
Query: 446 DIVQIFRVEREGETERF---RKQFS----NSKNRMLLWHGSRLTNWTGILSQGLRIAPPE 498
+I++I +V + ER+ RK+ S N N +L+HGS N I+ +G
Sbjct: 993 NILKIQKVCNKKLWERYTHRRKEVSEENHNHANERMLFHGSPFVN--AIIHKGFD---ER 1047
Query: 499 APATGYMFGKGVYFADMFSKSANYCYASPSATAGV-------------LLLCEVALGDMS 545
G MFG G+YFA+ SKS Y Y T LL C V LG S
Sbjct: 1048 HAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPVHKDRSCYICHRQLLFCRVTLGK-S 1106
Query: 546 ELLYANYDADKLPDGKLSTKG 566
L ++ P G S G
Sbjct: 1107 FLQFSAMKMAHSPPGHHSVTG 1127
>sp|Q3UES3|TNKS2_MOUSE Tankyrase-2 OS=Mus musculus GN=Tnks2 PE=2 SV=2
Length = 1166
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 26/141 (18%)
Query: 446 DIVQIFRVEREGETERF---RKQFS----NSKNRMLLWHGSRLTNWTGILSQGLRIAPPE 498
+I++I +V + ER+ RK+ S N N +L+HGS N I+ +G
Sbjct: 993 NILKIQKVCNKKLWERYTHRRKEVSEENHNHANERMLFHGSPFVN--AIIHKGFD---ER 1047
Query: 499 APATGYMFGKGVYFADMFSKSANYCYASPSATAGV-------------LLLCEVALGDMS 545
G MFG G+YFA+ SKS Y Y T LL C V LG S
Sbjct: 1048 HAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPIHKDRSCYICHRQLLFCRVTLGK-S 1106
Query: 546 ELLYANYDADKLPDGKLSTKG 566
L ++ P G S G
Sbjct: 1107 FLQFSAMKMAHSPPGHHSVTG 1127
>sp|C8ZEK9|AIM34_YEAS8 Altered inheritance of mitochondria protein 34, mitochondrial
OS=Saccharomyces cerevisiae (strain Lalvin EC1118 /
Prise de mousse) GN=AIM34 PE=3 SV=1
Length = 198
Score = 42.7 bits (99), Expect = 0.009, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 67 IESFGQMGVKQLREQADLRGLSKAGTKKELLERLCNHAEQSDSKDTLLQEEVNECKDEKI 126
I F + VK L+EQ RGL +G K +LL+RL H S+ K ++ ++NE K ++I
Sbjct: 66 ITPFQKFTVKVLKEQCKSRGLKLSGRKSDLLQRLITHDSCSNKKSSV---KINEPKKKRI 122
Query: 127 -----VKATKK 132
+K TKK
Sbjct: 123 LINDPIKITKK 133
>sp|B5VPC6|AIM34_YEAS6 Altered inheritance of mitochondria protein 34, mitochondrial
OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AIM34
PE=3 SV=1
Length = 198
Score = 42.7 bits (99), Expect = 0.009, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 67 IESFGQMGVKQLREQADLRGLSKAGTKKELLERLCNHAEQSDSKDTLLQEEVNECKDEKI 126
I F + VK L+EQ RGL +G K +LL+RL H S+ K ++ ++NE K ++I
Sbjct: 66 ITPFQKFTVKVLKEQCKSRGLKLSGRKSDLLQRLITHDSCSNKKSSV---KINEPKKKRI 122
Query: 127 -----VKATKK 132
+K TKK
Sbjct: 123 LINDPIKITKK 133
>sp|C7GLB5|AIM34_YEAS2 Altered inheritance of mitochondria protein 34, mitochondrial
OS=Saccharomyces cerevisiae (strain JAY291) GN=AIM34
PE=3 SV=1
Length = 198
Score = 42.7 bits (99), Expect = 0.009, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 67 IESFGQMGVKQLREQADLRGLSKAGTKKELLERLCNHAEQSDSKDTLLQEEVNECKDEKI 126
I F + VK L+EQ RGL +G K +LL+RL H S+ K ++ ++NE K ++I
Sbjct: 66 ITPFQKFTVKVLKEQCKSRGLKLSGRKSDLLQRLITHDSCSNKKSSV---KINEPKKKRI 122
Query: 127 -----VKATKK 132
+K TKK
Sbjct: 123 LINDPIKITKK 133
>sp|B3LLQ4|AIM34_YEAS1 Altered inheritance of mitochondria protein 34, mitochondrial
OS=Saccharomyces cerevisiae (strain RM11-1a) GN=AIM34
PE=3 SV=1
Length = 198
Score = 42.7 bits (99), Expect = 0.009, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 67 IESFGQMGVKQLREQADLRGLSKAGTKKELLERLCNHAEQSDSKDTLLQEEVNECKDEKI 126
I F + VK L+EQ RGL +G K +LL+RL H S+ K ++ ++NE K ++I
Sbjct: 66 ITPFQKFTVKVLKEQCKSRGLKLSGRKSDLLQRLITHDSCSNKKSSV---KINEPKKKRI 122
Query: 127 -----VKATKK 132
+K TKK
Sbjct: 123 LINDPIKITKK 133
>sp|Q03673|AIM34_YEAST Altered inheritance of mitochondria protein 34, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=AIM34 PE=1 SV=1
Length = 198
Score = 42.4 bits (98), Expect = 0.011, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 67 IESFGQMGVKQLREQADLRGLSKAGTKKELLERLCNHAEQSDSKDTLLQEEVNECKDEKI 126
I F + VK L+EQ RGL +G K +LL+RL H S+ K ++ ++NE K ++I
Sbjct: 66 ITPFQKFTVKVLKEQCKSRGLKLSGRKSDLLQRLITHDSCSNKKSSV---KINEPKKKRI 122
Query: 127 -----VKATKK 132
+K TKK
Sbjct: 123 LINDPIKITKK 133
>sp|A6ZM65|AIM34_YEAS7 Altered inheritance of mitochondria protein 34, mitochondrial
OS=Saccharomyces cerevisiae (strain YJM789) GN=AIM34
PE=3 SV=1
Length = 198
Score = 42.4 bits (98), Expect = 0.011, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 67 IESFGQMGVKQLREQADLRGLSKAGTKKELLERLCNHAEQSDSKDTLLQEEVNECKDEKI 126
I F + VK L+EQ RGL +G K +LL+RL H S+ K ++ ++NE K ++I
Sbjct: 66 ITPFQKFTVKVLKEQCKSRGLKLSGRKSDLLQRLITHDSCSNKKSSV---KINEPKKKRI 122
Query: 127 -----VKATKK 132
+K TKK
Sbjct: 123 LINDPIKITKK 133
>sp|O88453|SAFB1_RAT Scaffold attachment factor B1 OS=Rattus norvegicus GN=Safb PE=1
SV=2
Length = 931
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 32/38 (84%)
Query: 3 SNLKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEEN 40
S+L+V LRA+L +R L+++G K++L++RL++A+EEE
Sbjct: 32 SDLRVIDLRAELRKRNLTSSGNKSVLMERLKKAIEEEG 69
>sp|Q14151|SAFB2_HUMAN Scaffold attachment factor B2 OS=Homo sapiens GN=SAFB2 PE=1 SV=1
Length = 953
Score = 40.0 bits (92), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 3 SNLKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEENK 41
S L+V LRA+L +R L T G K++L++RL++AV+EE +
Sbjct: 31 SELRVIDLRAELKKRNLDTGGNKSVLMERLKKAVKEEGQ 69
>sp|D3YXK2|SAFB1_MOUSE Scaffold attachment factor B1 OS=Mus musculus GN=Safb PE=1 SV=2
Length = 937
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 31/38 (81%)
Query: 3 SNLKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEEN 40
S+L+V LRA+L +R L ++G K++L++RL++A+E+E
Sbjct: 32 SDLRVIDLRAELKKRNLDSSGNKSVLMERLKKAIEDEG 69
>sp|Q8N3A8|PARP8_HUMAN Poly [ADP-ribose] polymerase 8 OS=Homo sapiens GN=PARP8 PE=2 SV=1
Length = 854
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 476 WHGSRLTNWTGILSQGLRIAP-PEAPATGYMFGKGVYFADMFSKSANY 522
+HGS + NW IL GL +A G M+G G+Y + M S S Y
Sbjct: 696 FHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGY 743
>sp|Q80YR5|SAFB2_MOUSE Scaffold attachment factor B2 OS=Mus musculus GN=Safb2 PE=1 SV=2
Length = 991
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 3 SNLKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEENKK 42
S+L+V LRA+L +R L T G K++L++RL +A +EE ++
Sbjct: 26 SDLRVIDLRAELKKRNLDTGGNKSVLMERLRKAFKEEGQE 65
>sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo
sapiens GN=HNRNPUL1 PE=1 SV=2
Length = 856
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 5 LKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEENKKSVGSKKRGRECDETDSNG 60
LKV++LR +L +RGL T G KA L +RL+ A+E E RE D D G
Sbjct: 6 LKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDE------RELDADDEPG 55
>sp|Q3UD82|PARP8_MOUSE Poly [ADP-ribose] polymerase 8 OS=Mus musculus GN=Parp8 PE=2 SV=1
Length = 852
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 476 WHGSRLTNWTGILSQGLRIAP-PEAPATGYMFGKGVYFADMFSKSANY 522
+HGS + NW IL GL +A G M+G G+Y + M S S Y
Sbjct: 694 FHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGY 741
>sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4
Length = 915
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 13/66 (19%)
Query: 3 SNLKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEE-------------NKKSVGSKKR 49
S+L+V LRA+L +R + ++G K++L++RL++A+E+E NKK+ +
Sbjct: 32 SDLRVIDLRAELRKRNVDSSGNKSVLMERLKKAIEDEGGNPDEIEITSEGNKKTSKRSSK 91
Query: 50 GRECDE 55
GR+ +E
Sbjct: 92 GRKPEE 97
>sp|Q5R452|SAFB1_PONAB Scaffold attachment factor B1 OS=Pongo abelii GN=SAFB PE=2 SV=1
Length = 914
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 13/66 (19%)
Query: 3 SNLKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEE-------------NKKSVGSKKR 49
S+L+V LRA+L +R + ++G K++L++RL++A+E+E NKK+ +
Sbjct: 32 SDLRVIDLRAELRKRNVDSSGNKSVLMERLKKAIEDEGGNPDEIEITSEGNKKTSKRSSK 91
Query: 50 GRECDE 55
GR+ +E
Sbjct: 92 GRKPEE 97
>sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo
sapiens GN=HNRNPUL2 PE=1 SV=1
Length = 747
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 5 LKVDQLRAKLAQRGLSTAGTKAILVQRLEEAVEEE 39
LKV +LR++L +RGL + G K L QRL+EA++ E
Sbjct: 6 LKVTELRSELQRRGLDSRGLKVDLAQRLQEALDAE 40
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 232,309,757
Number of Sequences: 539616
Number of extensions: 10238653
Number of successful extensions: 29251
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 28941
Number of HSP's gapped (non-prelim): 167
length of query: 627
length of database: 191,569,459
effective HSP length: 124
effective length of query: 503
effective length of database: 124,657,075
effective search space: 62702508725
effective search space used: 62702508725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)