BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006884
(627 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 183/318 (57%), Gaps = 19/318 (5%)
Query: 302 EKPKDFGSGVQEAEKNKLCFLDGSYFNFDLEDLLRAS-----AEVLGKGSYGSTYKAILE 356
+KP+D V E ++ G F L +L AS +LG+G +G YK L
Sbjct: 3 KKPQDHFFDVPAEEDPEVHL--GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 357 DGTTVVVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415
DGT V VKRL+E E + Q EV + ++ H N++ +R + + E+L+VY YM G
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL 475
S+ L R R + LDW R +IALG+ARG+A++H K H ++K++N+LL ++
Sbjct: 121 SVASCL-RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 179
Query: 476 NGCISDVGLAHLINFP----TTATR-TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTG 530
+ D GLA L+++ A R TIG+ APE T K+S+K+DV+ +GV+LLE++TG
Sbjct: 180 EAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 239
Query: 531 KAP--LQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL-KYQDVEEEMVQMLQIALSCV 587
+ L +DD V L WV+ +++E+ + DV+L Y+D EE+ Q++Q+AL C
Sbjct: 240 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCT 297
Query: 588 AKVPDSRPKMDDVVRMIE 605
P RPKM +VVRM+E
Sbjct: 298 QSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 172/296 (58%), Gaps = 17/296 (5%)
Query: 324 GSYFNFDLEDLLRAS-----AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQ 378
G F L +L AS +LG+G +G YK L DG V VKRL+E E +
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 379 QMEV-VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR 437
Q EV + ++ H N++ +R + + E+L+VY YM GS+ L R R + LDW R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPKR 133
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TT 493
+IALG+ARG+A++H K H ++K++N+LL ++ + D GLA L+++
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 494 ATR-TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP--LQHSGHDDVVDLPRWVR 550
A R IG+ APE T K+S+K+DV+ +GV+LLE++TG+ L +DD V L WV+
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 551 SVVREEWTAEVFDVELL-KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
+++E+ + DV+L Y+D EE+ Q++Q+AL C P RPKM +VVRM+E
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 146/292 (50%), Gaps = 25/292 (8%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----ATKREFEQQMEV 382
NFD E + +G+G +G YK + + TTV VK+L + K++F+Q+++V
Sbjct: 26 NFD-ERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 83
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL 442
+ +H N+V + + D+ +VY YMP GSL L + DG L W+ R KIA
Sbjct: 84 MAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQ 140
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-FPTTA--TRTIG 499
G A GI F+H H +IKS+N+LL + ISD GLA F T +R +G
Sbjct: 141 GAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 500 ---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556
Y APE + + KSD+YSFGV+LLE++TG P + + L E+
Sbjct: 198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEK 255
Query: 557 WTAEVFDVELLKYQDVEEEMVQ-MLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ D K D + V+ M +A C+ + + RP + V ++++++
Sbjct: 256 TIEDYIDK---KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 143/292 (48%), Gaps = 25/292 (8%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----ATKREFEQQMEV 382
NFD E + +G+G +G YK + + TTV VK+L + K++F+Q+++V
Sbjct: 26 NFD-ERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 83
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL 442
+ +H N+V + + D+ +VY YMP GSL L + DG L W+ R KIA
Sbjct: 84 MAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQ 140
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-FPTTATR----- 496
G A GI F+H H +IKS+N+LL + ISD GLA F T
Sbjct: 141 GAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556
T Y APE + + KSD+YSFGV+LLE++TG P + + L E+
Sbjct: 198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEK 255
Query: 557 WTAEVFDVELLKYQDVEEEMVQ-MLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ D K D + V+ M +A C+ + + RP + V ++++++
Sbjct: 256 TIEDYIDK---KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 13/272 (4%)
Query: 341 VLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
++G G +G YK +L DG V +KR ++ E + + +H ++V + +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGT-ALDWNSRMKIALGTARGIAFIHSEGGAKF 459
++E +++Y YM G+L H SD T ++ W R++I +G ARG+ ++H+
Sbjct: 106 ERNEMILIYKYMENGNLKR--HLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---I 160
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAH------LINFPTTATRTIGYRAPEVTETRKASQ 513
H ++KS N+LL ++ I+D G++ + T+GY PE + ++
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 514 KSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573
KSDVYSFGV+L E+L ++ + S ++V+L W ++ D L +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KIRP 279
Query: 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
E + + A+ C+A + RP M DV+ +E
Sbjct: 280 ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 13/272 (4%)
Query: 341 VLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
++G G +G YK +L DG V +KR ++ E + + +H ++V + +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGT-ALDWNSRMKIALGTARGIAFIHSEGGAKF 459
++E +++Y YM G+L H SD T ++ W R++I +G ARG+ ++H+
Sbjct: 106 ERNEMILIYKYMENGNLKR--HLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---I 160
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAH------LINFPTTATRTIGYRAPEVTETRKASQ 513
H ++KS N+LL ++ I+D G++ + T+GY PE + ++
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 514 KSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573
KSDVYSFGV+L E+L ++ + S ++V+L W ++ D L +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KIRP 279
Query: 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
E + + A+ C+A + RP M DV+ +E
Sbjct: 280 ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 25/292 (8%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----ATKREFEQQMEV 382
NFD E + +G+G +G YK + + TTV VK+L + K++F+Q+++V
Sbjct: 20 NFD-ERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 77
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL 442
+ +H N+V + + D+ +VY YMP GSL L + DG L W+ R KIA
Sbjct: 78 MAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQ 134
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL---INFPTTATRTIG 499
G A GI F+H H +IKS+N+LL + ISD GLA R +G
Sbjct: 135 GAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 500 ---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556
Y APE + + KSD+YSFGV+LLE++TG P + + L E+
Sbjct: 192 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEK 249
Query: 557 WTAEVFDVELLKYQDVEEEMVQ-MLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ D K D + V+ M +A C+ + + RP + V ++++++
Sbjct: 250 TIEDYIDK---KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 111/214 (51%), Gaps = 20/214 (9%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----ATKREFEQQMEV 382
NFD E + G+G +G YK + + TTV VK+L + K++F+Q+++V
Sbjct: 17 NFD-ERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 74
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL 442
+H N+V + + D+ +VY Y P GSL L + DG L W+ R KIA
Sbjct: 75 XAKC-QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCKIAQ 131
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL---INFPTTATRTIG 499
G A GI F+H H +IKS+N+LL + ISD GLA +R +G
Sbjct: 132 GAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 500 ---YRAPEVTETRKASQKSDVYSFGVLLLEMLTG 530
Y APE + + KSD+YSFGV+LLE++TG
Sbjct: 189 TTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 14/219 (6%)
Query: 322 LDGSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREV---AATKREFEQ 378
+DG + DL E +G GS+G+ ++A G+ V VK L E A EF +
Sbjct: 27 MDGDDMDIPWCDL--NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLR 83
Query: 379 QMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM 438
++ ++ + +H N+V +V Y+ GSL+ LLH+ S LD R+
Sbjct: 84 EVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK--SGAREQLDERRRL 140
Query: 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL----INFPTTA 494
+A A+G+ ++H+ H N+KS N+L+ + + D GL+ L +A
Sbjct: 141 SMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA 199
Query: 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
T + APEV +++KSDVYSFGV+L E+ T + P
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLR-----EVAATKREFEQQMEVVGTIGKHSNVVP 394
E++G G +G Y+A G V VK R +++ T Q+ ++ + KH N++
Sbjct: 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIA 70
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+R + +V + G L +L R ++W A+ ARG+ ++H E
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDE 124
Query: 455 GGAKFTHGNIKSSNVLLTQDL-NG-------CISDVGLAHLINFPT--TATRTIGYRAPE 504
H ++KSSN+L+ Q + NG I+D GLA + T +A + APE
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPE 184
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
V S+ SDV+S+GVLL E+LTG+ P +
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 322 LDGSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREV---AATKREFEQ 378
+DG + DL E +G GS+G+ ++A G+ V VK L E A EF +
Sbjct: 27 MDGDDMDIPWCDL--NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLR 83
Query: 379 QMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM 438
++ ++ + +H N+V +V Y+ GSL+ LLH+ S LD R+
Sbjct: 84 EVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK--SGAREQLDERRRL 140
Query: 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL----INFPTTA 494
+A A+G+ ++H+ H ++KS N+L+ + + D GL+ L A
Sbjct: 141 SMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA 199
Query: 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
T + APEV +++KSDVYSFGV+L E+ T + P
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 33/273 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V + A
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVV 73
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+++ ++ YM GSL L ++ G L N + +A A G+AFI +
Sbjct: 74 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 126
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H N++++N+L++ L+ I+D GLA LI R I + APE + K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572
SDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDNC 231
Query: 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 232 PEELYQLMRL---CWKERPEDRPTFDYLRSVLE 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 35/274 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V R Y
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV--RLYA 77
Query: 400 YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
E + ++ YM GSL L ++ G L N + +A A G+AFI
Sbjct: 78 VVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 131
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQ 513
+ H +++++N+L++ L+ I+D GLA LI R I + APE +
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 191
Query: 514 KSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQD 571
KSDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 192 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDN 236
Query: 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 237 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 35/274 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V R Y
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV--RLYA 84
Query: 400 YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
E + ++ YM GSL L ++ G L N + +A A G+AFI
Sbjct: 85 VVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 138
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQ 513
+ H +++++N+L++ L+ I+D GLA LI R I + APE +
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 198
Query: 514 KSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQD 571
KSDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDN 243
Query: 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 244 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 274
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 35/274 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V R Y
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV--RLYA 81
Query: 400 YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
E + ++ YM GSL L ++ G L N + +A A G+AFI
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 135
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQ 513
+ H +++++N+L++ L+ I+D GLA LI R I + APE +
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 514 KSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQD 571
KSDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDN 240
Query: 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 241 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 33/273 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V + A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVV 77
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+++ ++ YM GSL L ++ G L N + +A A G+AFI +
Sbjct: 78 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 130
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H +++++N+L++ L+ I+D GLA LI R I + APE + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572
SDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDNC 235
Query: 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 236 PEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 35/274 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V R Y
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV--RLYA 83
Query: 400 YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
E + ++ YM GSL L ++ G L N + +A A G+AFI
Sbjct: 84 VVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 137
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQ 513
+ H +++++N+L++ L+ I+D GLA LI R I + APE +
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 197
Query: 514 KSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQD 571
KSDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDN 242
Query: 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 243 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 273
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 33/273 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V + A
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVV 78
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+++ ++ YM GSL L ++ G L N + +A A G+AFI +
Sbjct: 79 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 131
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H +++++N+L++ L+ I+D GLA LI R I + APE + K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572
SDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDNC 236
Query: 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 237 PEELYQLMRL---CWKERPEDRPTFDYLRSVLE 266
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 35/274 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V R Y
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV--RLYA 75
Query: 400 YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
E + ++ YM GSL L ++ G L N + +A A G+AFI
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 129
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQ 513
+ H +++++N+L++ L+ I+D GLA LI R I + APE +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 514 KSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQD 571
KSDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDN 234
Query: 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 235 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 33/273 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V + A
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVV 72
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+++ ++ YM GSL L ++ G L N + +A A G+AFI +
Sbjct: 73 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 125
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H +++++N+L++ L+ I+D GLA LI R I + APE + K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572
SDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDNC 230
Query: 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 231 PEELYQLMRL---CWKERPEDRPTFDYLRSVLE 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 33/273 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V + A
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVV 82
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+++ ++ YM GSL L ++ G L N + +A A G+AFI +
Sbjct: 83 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 135
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H +++++N+L++ L+ I+D GLA LI R I + APE + K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572
SDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDNC 240
Query: 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 241 PEELYQLMRL---CWKERPEDRPTFDYLRSVLE 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 33/273 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V + A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVV 83
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+++ ++ YM GSL L ++ G L N + +A A G+AFI +
Sbjct: 84 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 136
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H +++++N+L++ L+ I+D GLA LI R I + APE + K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572
SDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDNC 241
Query: 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 242 PEELYQLMRL---CWKERPEDRPTFDYLRSVLE 271
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 33/273 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V + A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVV 77
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+++ ++ YM GSL L ++ G L N + +A A G+AFI +
Sbjct: 78 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 130
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H +++++N+L++ L+ I+D GLA LI R I + APE + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572
SDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDNC 235
Query: 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 236 PEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 33/273 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G +G + T V VK L++ + + F + ++ + +H +V + A
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVV 87
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+++ ++ YM GSL L ++ G L N + +A A G+AFI +
Sbjct: 88 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 140
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H +++++N+L++ L+ I+D GLA LI R I + APE + K
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572
SDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDNC 245
Query: 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 246 PEELYQLMRL---CWKERPEDRPTFDYLRSVLE 275
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 35/274 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG G G + T V VK L++ + + F + ++ + +H +V R Y
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV--RLYA 75
Query: 400 YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
E + ++ YM GSL L ++ G L N + +A A G+AFI
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 129
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQ 513
+ H +++++N+L++ L+ I+D GLA LI R I + APE +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 514 KSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQD 571
KSDV+SFG+LL E++T G+ P + +V+ +L R R +++ +
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR---------------MVRPDN 234
Query: 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
EE+ Q++++ C + P+ RP D + ++E
Sbjct: 235 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 44/331 (13%)
Query: 290 QGSGVLKGKGTAEKPKDFGSGVQEAEKNKLCFLDGSYFNFDLEDLLRASAEVLGKGSYGS 349
+GS GT EK K G + D SY+ +++E + +G GS+G+
Sbjct: 3 RGSHHHHHHGTQEKNKIRPRGQR----------DSSYY-WEIEASEVMLSTRIGSGSFGT 51
Query: 350 TYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLV 407
YK V VK L+ V T +F+ V + K H N++ Y +KD +
Sbjct: 52 VYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-TKDNLAI 108
Query: 408 VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSS 467
V + SL+ LH T + IA TA+G+ ++H++ H ++KS+
Sbjct: 109 VTQWCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSN 161
Query: 468 NVLLTQDLNGCISDVGLAHLINFPTTA------TRTIGYRAPEVTETRKA---SQKSDVY 518
N+ L + L I D GLA + + + + T ++ + APEV + S +SDVY
Sbjct: 162 NIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVY 221
Query: 519 SFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQ 578
S+G++L E++TG+ P H + D + + V R + ++ + Y++ + M +
Sbjct: 222 SYGIVLYELMTGELPYSHINNRDQI-----IFMVGRGYASPDLSKL----YKNCPKAMKR 272
Query: 579 MLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
++ CV KV + RP ++ IE +Q
Sbjct: 273 LVA---DCVKKVKEERPLFPQILSSIELLQH 300
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G + + T V VK L+ + + F ++ ++ T+ +H +V + A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRLYAVVTR 79
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ ++ YM GSL L +SD G + + + A G+A+I + + H
Sbjct: 80 EEPIYIITEYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIH 133
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++NVL+++ L I+D GLA +I R I + APE + KSD
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD-LPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
V+SFG+LL E++T GK P + DV+ L + R E E++D+ + +++ E
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAE 253
Query: 575 E 575
E
Sbjct: 254 E 254
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 15/241 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G + A T V VK ++ + + F + V+ T+ +H +V + A +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVV-T 80
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
K+ ++ +M GSL L +SD G+ + + A G+AFI + H
Sbjct: 81 KEPIYIITEFMAKGSLLDFL---KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIH 134
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L++ L I+D GLA +I R I + APE + KSD
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD-LPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
V+SFG+LL+E++T G+ P + +V+ L R R E E++++ + +++ E
Sbjct: 195 VWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPE 254
Query: 575 E 575
E
Sbjct: 255 E 255
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 33/291 (11%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 63
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH + T + + IA TA
Sbjct: 64 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTA 118
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIG 499
RG+ ++H++ H ++KS+N+ L +D I D GLA + + + + + +I
Sbjct: 119 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 500 YRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556
+ APEV + + S +SDVY+FG++L E++TG+ P + + D + + V R
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGS 230
Query: 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ ++ V + + M +++ C+ K D RP ++ IE++
Sbjct: 231 LSPDLSKVR----SNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEEL 274
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 19/225 (8%)
Query: 330 DLEDLLRASAEV---LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI 386
D+ ++ R S ++ LG G +G + T V +K L+ + F ++ +++ +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 387 GKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-GTALDWNSRMKIALGTA 445
KH +V + A S++ +V YM GSL L DG G AL + + +A A
Sbjct: 62 -KHDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFL----KDGEGRALKLPNLVDMAAQVA 115
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGY 500
G+A+I + H +++S+N+L+ L I+D GLA LI R I +
Sbjct: 116 AGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW 172
Query: 501 RAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
APE + + KSDV+SFG+LL E++T G+ P + +V++
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLE 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 342 LGKGSYGSTYKAIL----EDGTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPV 395
+G+GS+G KAIL EDG V+K + + +E E+ V + KH N+V
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS---DGGTALDWNSRMKIALGTARGIAFIH 452
R + +V Y G LF ++ + LDW ++ +AL +H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVH 142
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR-TIG---YRAPEVTET 508
K H +IKS N+ LT+D + D G+A ++N R IG Y +PE+ E
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICEN 199
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+ + KSD+++ G +L E+ T K + ++V
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G + + T V VK L+ + + F ++ ++ T+ +H +V + A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRLYAVVTK 78
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ ++ +M GSL L +SD G + + + A G+A+I + + H
Sbjct: 79 EEPIYIITEFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIH 132
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++NVL+++ L I+D GLA +I R I + APE + KS+
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD-LPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
V+SFG+LL E++T GK P + DV+ L + R E E++D+ + +++ E
Sbjct: 193 VWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAE 252
Query: 575 E 575
E
Sbjct: 253 E 253
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 15/241 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G + A T V VK ++ + + F + V+ T+ +H +V + A +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVV-T 253
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
K+ ++ +M GSL L +SD G+ + + A G+AFI + H
Sbjct: 254 KEPIYIITEFMAKGSLLDFL---KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIH 307
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L++ L I+D GLA +I R I + APE + KSD
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD-LPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
V+SFG+LL+E++T G+ P + +V+ L R R E E++++ + +++ E
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPE 427
Query: 575 E 575
E
Sbjct: 428 E 428
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 117/237 (49%), Gaps = 17/237 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G + A T V VK ++ + + F + V+ T+ +H +V + A +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVV-T 247
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
K+ ++ +M GSL L +SD G+ + + A G+AFI + H
Sbjct: 248 KEPIYIITEFMAKGSLLDFL---KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIH 301
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHL-INFPTTATRTIGYRAPEVTETRKASQKSDVYSF 520
+++++N+L++ L I+D GLA + FP I + APE + KSDV+SF
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKFP------IKWTAPEAINFGSFTIKSDVWSF 355
Query: 521 GVLLLEMLT-GKAPLQHSGHDDVVD-LPRWVRSVVREEWTAEVFDVELLKYQDVEEE 575
G+LL+E++T G+ P + +V+ L R R E E++++ + +++ EE
Sbjct: 356 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEE 412
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ I +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI-RHEKLVQLYAVV-S 83
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 33/291 (11%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH + T + + IA TA
Sbjct: 76 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTA 130
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIG 499
RG+ ++H++ H ++KS+N+ L +D I D GLA + + + + +I
Sbjct: 131 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 500 YRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556
+ APEV + + S +SDVY+FG++L E++TG+ P + + D + + V R
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGS 242
Query: 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ ++ V + + M +++ C+ K D RP ++ IE++
Sbjct: 243 LSPDLSKVR----SNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEEL 286
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 73
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 74 EEPIXIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 127
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 188 VWSFGILLTELTTKGRVPYPGMVNREVLD 216
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 84 EEPIYIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 76
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 77 EEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 130
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 191 VWSFGILLTELTTKGRVPYPGMVNREVLD 219
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 64 CNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYV 123
C ++ + ++L GFTG IP ++ L L L NYL+GT+PS + S+S L+ +
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 124 YLQNNYFSGVLPA--FRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP 181
L N G +P L L L FN TG IP G N T L+ ++L NN ++G IP
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 182 PL--NLPRLKILNFSNNNLNGSIPDSL 206
L L IL SNN+ +G+IP L
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 31/166 (18%)
Query: 81 FTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSIS---------------------- 118
F+G +P +++ K+ LK+L L N +G LP +T++S
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 119 -----SLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNL 171
+LQ +YLQNN F+G +P S +L +L LSFN +G IP +L++L L L
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Query: 172 QNNSISGAIPP--LNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215
N + G IP + + L+ L N+L G IP L N +++
Sbjct: 447 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 492
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 89 SIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL---QLNAL 145
+I LK+L++ SN G +P + SLQY+ L N F+G +P F S L L
Sbjct: 239 AISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGL 296
Query: 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP---LNLPRLKILNFSNNNLNGSI 202
DLS N F G +PP F + + L L L +N+ SG +P L + LK+L+ S N +G +
Sbjct: 297 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGEL 356
Query: 203 PDSL 206
P+SL
Sbjct: 357 PESL 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 51/174 (29%)
Query: 81 FTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA---- 136
TG IP IG+L+ L IL L +N +G +P+++ SL ++ L N F+G +PA
Sbjct: 499 LTGEIPK-WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Query: 137 --------------------------------------FRSLQLNAL------DLSFNAF 152
RS QLN L +++ +
Sbjct: 558 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 617
Query: 153 TGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPD 204
G+ P F N + L++ N +SG IP ++P L ILN +N+++GSIPD
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 671
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 73/161 (45%), Gaps = 33/161 (20%)
Query: 64 CNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYV 123
CN+ SRV G H T P N+ ++ L + N L+G +P +I S+ L +
Sbjct: 610 CNI-TSRVYGGH------TSPTFDNN----GSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 658
Query: 124 YLQNNYFSGVLP-AFRSLQ-LNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP 181
L +N SG +P L+ LN LDLS N G IP LT L ++L NN++SG IP
Sbjct: 659 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Query: 182 PLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVGNSMLCG 222
+ +TFP + F+ N LCG
Sbjct: 719 EMG--------------------QFETFPPAKFLNNPGLCG 739
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 96 LKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQ-LNALDLSFNAFTG 154
LK L++ N ++G + D++ +L+++ + +N FS +P L LD+S N +G
Sbjct: 177 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSG 234
Query: 155 NIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQ 207
+ T L LLN+ +N G IPPL L L+ L+ + N G IPD L
Sbjct: 235 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLS 287
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 32 QALLDFADAVPHARKL-NWNAAAPVCSSWIGVTCNVNRSRVIGIHLP--GIGFTGPIPAN 88
L+ F D +P L +W++ C+ + GVTC ++ I + +GF+ +
Sbjct: 12 HQLISFKDVLPDKNLLPDWSSNKNPCT-FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSL 70
Query: 89 SIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQ----LNA 144
LS ++++NG++ S +SL + L N SG + SL L
Sbjct: 71 LSLTGLESLFLS--NSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 127
Query: 145 LDLSFNA--FTGNIPPGFQNLTRLHLLNLQNNSISGA 179
L++S N F G + G + L L +L+L NSISGA
Sbjct: 128 LNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSISGA 163
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 84 EEPIYIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 72
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 73 EEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 126
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 187 VWSFGILLTELTTKGRVPYPGMVNREVLD 215
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 64 CNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYV 123
C ++ + ++L GFTG IP ++ L L L NYL+GT+PS + S+S L+ +
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 124 YLQNNYFSGVLPA--FRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP 181
L N G +P L L L FN TG IP G N T L+ ++L NN ++G IP
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 182 PL--NLPRLKILNFSNNNLNGSIPDSL 206
L L IL SNN+ +G+IP L
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 81 FTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSIS-SLQYVYLQNNYFSG-VLPAFR 138
F+G +P +++ K+ LK+L L N +G LP +T++S SL + L +N FSG +LP
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 139 SLQLNALD---LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNF 193
N L L N FTG IPP N + L L+L N +SG IP +L +L+ L
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Query: 194 SNNNLNGSIPDSL 206
N L G IP L
Sbjct: 450 WLNMLEGEIPQEL 462
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 89 SIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL---QLNAL 145
+I LK+L++ SN G +P + SLQY+ L N F+G +P F S L L
Sbjct: 242 AISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGL 299
Query: 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP---LNLPRLKILNFSNNNLNGSI 202
DLS N F G +PP F + + L L L +N+ SG +P L + LK+L+ S N +G +
Sbjct: 300 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGEL 359
Query: 203 PDSL 206
P+SL
Sbjct: 360 PESL 363
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 73/161 (45%), Gaps = 33/161 (20%)
Query: 64 CNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYV 123
CN+ SRV G H T P N+ ++ L + N L+G +P +I S+ L +
Sbjct: 613 CNI-TSRVYGGH------TSPTFDNN----GSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 661
Query: 124 YLQNNYFSGVLP-AFRSLQ-LNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP 181
L +N SG +P L+ LN LDLS N G IP LT L ++L NN++SG IP
Sbjct: 662 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Query: 182 PLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVGNSMLCG 222
+ +TFP + F+ N LCG
Sbjct: 722 EMG--------------------QFETFPPAKFLNNPGLCG 742
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 51/174 (29%)
Query: 81 FTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA---- 136
TG IP IG+L+ L IL L +N +G +P+++ SL ++ L N F+G +PA
Sbjct: 502 LTGEIPK-WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Query: 137 --------------------------------------FRSLQLNAL------DLSFNAF 152
RS QLN L +++ +
Sbjct: 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 620
Query: 153 TGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPD 204
G+ P F N + L++ N +SG IP ++P L ILN +N+++GSIPD
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 96 LKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQ-LNALDLSFNAFTG 154
LK L++ N ++G + D++ +L+++ + +N FS +P L LD+S N +G
Sbjct: 180 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSG 237
Query: 155 NIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQ 207
+ T L LLN+ +N G IPPL L L+ L+ + N G IPD L
Sbjct: 238 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLS 290
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 32 QALLDFADAVPHARKL-NWNAAAPVCSSWIGVTCNVNRSRVIGIHLP--GIGFTGPIPAN 88
L+ F D +P L +W++ C+ + GVTC ++ I + +GF+ +
Sbjct: 15 HQLISFKDVLPDKNLLPDWSSNKNPCT-FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSL 73
Query: 89 SIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQ----LNA 144
LS ++++NG++ S +SL + L N SG + SL L
Sbjct: 74 LSLTGLESLFLS--NSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 130
Query: 145 LDLSFNA--FTGNIPPGFQNLTRLHLLNLQNNSISGA 179
L++S N F G + G + L L +L+L NSISGA
Sbjct: 131 LNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSISGA 166
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 84 EEPIYIVCEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 74
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 75 EEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 128
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 189 VWSFGILLTELTTKGRVPYPGMVNREVLD 217
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 33/271 (12%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 332
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 333 EEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 386
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD-LPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
V+SFG+LL E+ T G+ P + +V+D + R R E + D+
Sbjct: 447 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL---------- 496
Query: 575 EMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605
M Q C K P+ RP + + +E
Sbjct: 497 -MCQ-------CWRKEPEERPTFEYLQAFLE 519
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 249
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 250 EEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 249
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 250 EEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM G L L + + G L + +A A G+A++ + H
Sbjct: 84 EEPIYIVMEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 80
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + ++ A G+A++ + H
Sbjct: 81 EEPIYIVTEYMNKGSLLDFL---KGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 195 VWSFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 31/290 (10%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 388 KHSNVVPVRAYYYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446
K +V + YS +L +V + SL+ LH + T + + IA TAR
Sbjct: 76 KTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTAR 131
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGY 500
G+ ++H++ H ++KS+N+ L +D I D GLA + + + + +I +
Sbjct: 132 GMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 501 RAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557
APEV + + S +SDVY+FG++L E++TG+ P + + D + + V R
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSL 243
Query: 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ ++ V + + M +++ C+ K D RP ++ IE++
Sbjct: 244 SPDLSKVR----SNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEEL 286
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 249
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 250 EEPIYIVGEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 80
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + ++ A G+A++ + H
Sbjct: 81 EEPIYIVTEYMNKGSLLDFL---KGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 195 VWSFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
++ ++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM G L L + + G L + +A A G+A++ + H
Sbjct: 84 EEPIYIVTEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GLA LI R I + APE + + KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 77
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 78 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 130
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H N+ + N+L+ + I D GL ++ I + AP
Sbjct: 131 L---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 21/227 (9%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 60 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 114
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIG 499
+G+ ++H++ H ++KS+N+ L +DL I D GLA + + + + + +I
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 500 YRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+ APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 21/227 (9%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 65 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 119
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIG 499
+G+ ++H++ H ++KS+N+ L +DL I D GLA + + + + + +I
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 500 YRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+ APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 30 DKQALLDFADAVPHARKLN-WNAAAPVCS-SWIGVTCNVNRS--RVIGIHLPGIGFTGPI 85
DKQALL + + L+ W C+ +W+GV C+ + RV + L G+ P
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY 66
Query: 86 P-ANSIGKLDALKILSLRS-NYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL--Q 141
P +S+ L L L + N L G +P I ++ L Y+Y+ + SG +P F S
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 142 LNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKI---LNFSNNNL 198
L LD S+NA +G +PP +L L + N ISGAIP K+ + S N L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 199 NGSIPDSLQTFPNSSFV 215
G IP + N +FV
Sbjct: 187 TGKIPPTFANL-NLAFV 202
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 81 FTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAF-RS 139
TG IP + L+ L + L N L G S + Q ++L N + L S
Sbjct: 186 LTGKIPP-TFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS 243
Query: 140 LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP-LNLPRLKILNFSNN 196
LN LDL N G +P G L LH LN+ N++ G IP NL R + ++NN
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 21/227 (9%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 61
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 62 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 116
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIG 499
+G+ ++H++ H ++KS+N+ L +DL I D GLA + + + + + +I
Sbjct: 117 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 500 YRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+ APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 65 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 119
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIG 499
+G+ ++H++ H ++KS+N+ L +DL I D GLA + + + + + +I
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 500 YRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAP 533
+ APEV + S +SDVY+FG++L E++TG+ P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
EV+G+G++G KA V +K++ E + ++ F ++ + + H N+V + Y
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRV-NHPNIV--KLYG 68
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR---MKIALGTARGIAFIHSEGG 456
+ +V Y GSL+ +LH G L + + M L ++G+A++HS
Sbjct: 69 ACLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 457 AKFTHGNIKSSNVLLTQDLNGC-ISDVGLAHLINFPTTATR-TIGYRAPEVTETRKASQK 514
H ++K N+LL I D G A I T + + + APEV E S+K
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 515 SDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
DV+S+G++L E++T + P G F + +
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIG--------------------GPAFRIMWAVHNGTRP 223
Query: 575 EMVQML-----QIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGTESNVQTP 627
+++ L + C +K P RP M+++V+++ + R G + +Q P
Sbjct: 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM------RYFPGADEPLQYP 275
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 30/211 (14%)
Query: 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRL-REVAATKREFEQQMEVVGTIGKHSNVVPVR 396
EVLGKG +G K E G +V+K L R T+R F ++++V+ + +H NV+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFI 73
Query: 397 AYYYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
Y KD++L + Y+ G+L ++ + W+ R+ A A G+A++HS
Sbjct: 74 GVLY-KDKRLNFITEYIKGGTLRGII----KSMDSQYPWSQRVSFAKDIASGMAYLHS-- 126
Query: 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL-------------INFPTTATR--TIG- 499
H ++ S N L+ ++ N ++D GLA L + P R +G
Sbjct: 127 -MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 500 --YRAPEVTETRKASQKSDVYSFGVLLLEML 528
+ APE+ R +K DV+SFG++L E++
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 21/227 (9%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 29 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 86
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 87 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 141
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIG 499
+G+ ++H++ H ++KS+N+ L +DL I D GLA + + + + + +I
Sbjct: 142 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 500 YRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+ APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
EV+G+G++G KA V +K++ E + ++ F ++ + + H N+V + Y
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRV-NHPNIV--KLYG 69
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR---MKIALGTARGIAFIHSEGG 456
+ +V Y GSL+ +LH G L + + M L ++G+A++HS
Sbjct: 70 ACLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 457 AKFTHGNIKSSNVLLTQDLNGC-ISDVGLAHLINFPTTATR-TIGYRAPEVTETRKASQK 514
H ++K N+LL I D G A I T + + + APEV E S+K
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 515 SDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
DV+S+G++L E++T + P G F + +
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIG--------------------GPAFRIMWAVHNGTRP 224
Query: 575 EMVQML-----QIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGTESNVQTP 627
+++ L + C +K P RP M+++V+++ + R G + +Q P
Sbjct: 225 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM------RYFPGADEPLQYP 276
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 75
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 76 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 128
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 129 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 21/227 (9%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 88 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 142
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIG 499
+G+ ++H++ H ++KS+N+ L +DL I D GLA + + + + + +I
Sbjct: 143 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 500 YRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+ APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 74
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 75 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 127
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 128 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 77 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 129
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 80
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 81 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 133
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 134 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 77 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 129
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 77 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 129
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+G +G + T V +K L+ + F Q+ +V+ + +H +V + A S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 250
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
++ +V YM GSL L + + G L + +A A G+A++ + H
Sbjct: 251 EEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 304
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKSD 516
+++++N+L+ ++L ++D GL LI R I + APE + + KSD
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFG+LL E+ T G+ P + +V+D
Sbjct: 365 VWSFGILLTELTTKGRVPYPGMVNREVLD 393
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 81
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 82 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 134
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 135 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 94
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 95 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 147
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 107
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 108 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 160
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 161 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 60 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 114
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR--------- 496
+G+ ++H++ H ++KS+N+ L +DL I D GLA T +R
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQFEQ 165
Query: 497 ---TIGYRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+I + APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 80 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 82
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 83 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 135
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 136 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 83
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 84 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 136
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 137 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 94
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 95 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEY 147
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 340 EVLGKGSYGSTYKAILED--GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRA 397
+ +GKG +G +L D G V VK ++ AT + F + V+ + +HSN+V +
Sbjct: 12 QTIGKGEFGDV---MLGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQLLG 66
Query: 398 YYYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ L +V YM GSL L RS G + L + +K +L + ++ G
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---G 120
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVTETRKASQKS 515
F H ++ + NVL+++D +SD GL + T + + APE +K S KS
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 516 DVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547
DV+SFG+LL E+ + G+ P DVV PR
Sbjct: 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVV--PR 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 19/226 (8%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 388 KHSNVVPVRAYYYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446
K +V + YS +L +V + SL+ LH T + + IA TA+
Sbjct: 60 KTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQ 115
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGY 500
G+ ++H++ H ++KS+N+ L +DL I D GLA + + + + + +I +
Sbjct: 116 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 501 RAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 22 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 79
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 80 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 134
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR--------- 496
+G+ ++H++ H ++KS+N+ L +DL I D GLA T +R
Sbjct: 135 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQFEQ 185
Query: 497 ---TIGYRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+I + APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 340 EVLGKGSYGSTYKAILED--GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRA 397
+ +GKG +G +L D G V VK ++ AT + F + V+ + +HSN+V +
Sbjct: 27 QTIGKGEFGDV---MLGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQLLG 81
Query: 398 YYYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ L +V YM GSL L RS G + L + +K +L + ++ G
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---G 135
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVTETRKASQKS 515
F H ++ + NVL+++D +SD GL + T + + APE +K S KS
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 516 DVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547
DV+SFG+LL E+ + G+ P DVV PR
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVV--PR 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG 387
++++ D + +G GS+G+ YK V VK L A T ++ + VG +
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 388 K--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
K H N++ Y +K + +V + SL+ LH T + + IA TA
Sbjct: 88 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTA 142
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR--------- 496
+G+ ++H++ H ++KS+N+ L +DL I D GLA T +R
Sbjct: 143 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQFEQ 193
Query: 497 ---TIGYRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+I + APEV + S +SDVY+FG++L E++TG+ P + + D +
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ Y+P GSL ++ H R D L + S++ +G+ +
Sbjct: 80 KGVCYSAGRRNLKLIM-EYLPYGSLRDYLQAHAERIDHIKLLQYTSQI------CKGMEY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPV 395
LGKG++GS Y + ++ G V VK+L+ R+FE+++E++ ++ +H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 396 RAYYYS---KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ YS ++ KL++ ++P GSL ++ H+ R D L + S++ +G+ +
Sbjct: 80 KGVCYSAGRRNLKLIM-EFLPYGSLREYLQKHKERIDHIKLLQYTSQI------CKGMEY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAP 503
+ G ++ H ++ + N+L+ + I D GL ++ I + AP
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E K S SDV+SFGV+L E+ T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 340 EVLGKGSYGSTYKAILED--GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRA 397
+ +GKG +G +L D G V VK ++ AT + F + V+ + +HSN+V +
Sbjct: 199 QTIGKGEFGDV---MLGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQLLG 253
Query: 398 YYYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ L +V YM GSL L RS G + L + +K +L + ++ G
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---G 307
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVTETRKASQKS 515
F H ++ + NVL+++D +SD GL + T + + APE +K S KS
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 516 DVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547
DV+SFG+LL E+ + G+ P DVV PR
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVV--PR 398
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 342 LGKGSYGSTY-----KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y K+ V+ K E + + +++E+ + H N++ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL-HHPNILRLY 89
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y+Y + ++ Y P G L+ L ++ D I A + + H G
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQKS-----CTFDEQRTATIMEELADALMYCH---G 141
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----TATRTIGYRAPEVTETRKAS 512
K H +IK N+LL I+D G + ++ P+ T T+ Y PE+ E R +
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
+K D++ GVL E+L G P + + H++
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSN-VVP 394
LGKG++GS Y + ++ G V VK+L+ +R+F+++++++ + HS+ +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIVK 72
Query: 395 VRAYYYS--KDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
R Y + E +V Y+P+G L F+ HR R D L ++S++ +G+ +
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEY 126
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-------TATRTIGYRAP 503
+ G + H ++ + N+L+ + + I+D GLA L+ I + AP
Sbjct: 127 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E S++SDV+SFGV+L E+ T
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 35/278 (12%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G + V VK ++E + ++ EF Q+ + T+ K S+ V+ Y
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQ---TMMKLSHPKLVKFYGVC 72
Query: 402 KDEK--LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
E +V Y+ G L L + G L+ + +++ G+AF+ S +F
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESH---QF 125
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR-TIGYRAPEVTETRKASQK 514
H ++ + N L+ +DL +SD G+ + + T+ + + APEV K S K
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573
SDV++FG+L+ E+ + GK P + +VV + R ++
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDT------------ 233
Query: 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611
+ QI SC ++P+ RP ++ IE +++ +
Sbjct: 234 -----IYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 45/291 (15%)
Query: 341 VLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVVP 394
V+G G +G L+ V +K L+ +R+F + ++G H N++
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIH 87
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGG-TALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L +N DG T + ++ G + G+ ++
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKN--DGQFTVIQLVGMLR---GISAGMKYLSD 142
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + APE
Sbjct: 143 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G+++ E+++ G+ P + DV+ V E +
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-------KAVEEGY-------R 245
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRA 616
L D + Q++ L C K +SRPK D++V M++++ +RN A
Sbjct: 246 LPSPMDCPAALYQLM---LDCWQKERNSRPKFDEIVNMLDKL----IRNPA 289
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATK-------REFEQQMEVVGTIGKHSNV 392
E +G+G+YG YKA G V +KR+R A + RE E+ H N+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-----HHPNI 81
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL-GTARGIAFI 451
V + +S+ +V+ +M L +L N+ T L +S++KI L RG+A
Sbjct: 82 VSLIDVIHSERCLTLVFEFM-EKDLKKVLDENK----TGLQ-DSQIKIYLYQLLRGVAHC 135
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEV-T 506
H + H ++K N+L+ D ++D GLA P T T+ YRAP+V
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGK 531
++K S D++S G + EM+TGK
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATK-------REFEQQMEVVGTIGKHSNV 392
E +G+G+YG YKA G V +KR+R A + RE E+ H N+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-----HHPNI 81
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL-GTARGIAFI 451
V + +S+ +V+ +M L +L N+ T L +S++KI L RG+A
Sbjct: 82 VSLIDVIHSERCLTLVFEFM-EKDLKKVLDENK----TGLQ-DSQIKIYLYQLLRGVAHC 135
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEV-T 506
H + H ++K N+L+ D ++D GLA P T T+ YRAP+V
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGK 531
++K S D++S G + EM+TGK
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E +G+G+ G+ Y A+ + G V ++++ K+E +V K+ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
Y DE VV Y+ GSL ++ T +D + + + F+HS +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---Q 137
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--IG---YRAPEVTETRKASQ 513
H NIKS N+LL D + ++D G I P + R+ +G + APEV +
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 514 KSDVYSFGVLLLEMLTGKAP 533
K D++S G++ +EM+ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 32/274 (11%)
Query: 297 GKGTAEKPKDF-GSGVQ-EAEKNKLCFLDGSYFNFDLEDLLRASAEVLGKGSYGSTYKAI 354
G G++ P + GSG+Q +N F D + D++ LG+G++G + A
Sbjct: 4 GSGSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWE--LGEGAFGKVFLAE 61
Query: 355 L------EDGTTVVVKRLREVAATKRE-FEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407
+D V VK L+E + + R+ F+++ E++ T+ +H ++V L+
Sbjct: 62 CHNLLPEQDKMLVAVKALKEASESARQDFQREAELL-TMLQHQHIVRFFGVCTEGRPLLM 120
Query: 408 VYSYMPAGSLFMLLHRNRSD-----GGT-----ALDWNSRMKIALGTARGIAFIHSEGGA 457
V+ YM G L L + D GG L + +A A G+ ++ G
Sbjct: 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGL 177
Query: 458 KFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---NFPTTATRT---IGYRAPEVTETRKA 511
F H ++ + N L+ Q L I D G++ I ++ RT I + PE RK
Sbjct: 178 HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF 237
Query: 512 SQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
+ +SDV+SFGV+L E+ T GK P + + +D
Sbjct: 238 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 94
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ F+
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKFL 150
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--------LINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA ++ T A + + A
Sbjct: 151 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 98
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ F+
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKFL 154
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--------LINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA ++ T A + + A
Sbjct: 155 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 34/254 (13%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREF 376
GS + LED LGKG +G+ Y K IL V+ K E A + +
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFIL--ALKVLFKTQLEKAGVEHQL 59
Query: 377 EQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWN 435
+++E+ + +H N++ + Y++ ++ Y P G+++ L + +R D +
Sbjct: 60 RREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118
Query: 436 SRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491
+ + A +++ HS+ + H +IK N+LL + I+D G + ++ P
Sbjct: 119 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRR 167
Query: 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRS 551
TT T+ Y PE+ E R +K D++S GVL E L G P + + + R
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET------YRR 221
Query: 552 VVREEWTAEVFDVE 565
+ R E+T F E
Sbjct: 222 ISRVEFTFPDFVTE 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 111
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKYL 167
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 168 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 94
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ F+
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKFL 150
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--------LINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA ++ T A + + A
Sbjct: 151 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 93
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ F+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKFL 149
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--------LINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA ++ T A + + A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 91
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ F+
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKFL 147
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--------LINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA ++ T A + + A
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A ++ V+ K E A + + +++E+ + +H N++ +
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 75 GYFHDSTRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK-- 127
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKAS 512
K H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 128 -KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHD 184
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + D
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 152
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ F+
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKFL 208
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--------LINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA ++ T A + + A
Sbjct: 209 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 93
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ F+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKFL 149
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--------LINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA ++ T A + + A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREF 376
GS + LED LGKG +G+ Y K IL V+ K E A + +
Sbjct: 4 GSKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQL 59
Query: 377 EQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNS 436
+++E+ + +H N++ + Y++ ++ Y P G+++ L + + D
Sbjct: 60 RREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQR 113
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492
A +++ HS+ + H +IK N+LL I+D G + ++ P T
Sbjct: 114 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 168
Query: 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
T T+ Y PE+ E R +K D++S GVL E L GK P + + + +
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 85
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVAKGMKYL 141
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 142 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 112
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVAKGMKYL 168
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 169 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 100
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 153
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 210
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 93
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVAKGMKYL 149
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 92
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVAKGMKYL 148
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 149 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA I+ +T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 93
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVAKGMKYL 149
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 90
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVAKGMKYL 146
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 147 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 91
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVAKGMKYL 147
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK-- 127
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 184
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 88
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVAKGMKYL 144
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA + ++ T A + + A
Sbjct: 145 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 91
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 92 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 144
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 34/212 (16%)
Query: 340 EVLGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNV---VP 394
EV +G +G +KA +L + V + +++ K+ ++ + EV G KH N+ +
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 395 VRAYYYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
S D L ++ ++ GSL L N + WN IA ARG+A++H
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHE 139
Query: 454 E-----GGAK--FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG------Y 500
+ G K +H +IKS NVLL +L CI+D GLA +A T G Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 501 RAPEVTE-----TRKASQKSDVYSFGVLLLEM 527
APEV E R A + D+Y+ G++L E+
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---HLINFPTTATR- 496
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA H I++ T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 497 --TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---HLINFPTTATR- 496
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA H I++ T
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 497 --TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 32/268 (11%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLRE-VAATKREFEQQMEVVGTIGKHSNVVP 394
LG+G++G + A +D V VK L++ A +++F+++ E++ + +H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHIVK 81
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR-----------MKIALG 443
D ++V+ YM G L L + D +D R + IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT------ 497
A G+ ++ S+ F H ++ + N L+ +L I D G++ + + T R
Sbjct: 142 IASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDV-YSTDYYRVGGHTML 197
Query: 498 -IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVRE 555
I + PE RK + +SDV+SFGV+L E+ T GK P + +V++ R + R
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP 257
Query: 556 EWT-AEVFDVELLKYQDVEEEMVQMLQI 582
EV+DV L +Q ++ + + +I
Sbjct: 258 RVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 340 EVLGKGSYGSTYKAILED--GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRA 397
+ +GKG +G +L D G V VK ++ AT + F + V+ + +HSN+V +
Sbjct: 18 QTIGKGEFGDV---MLGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQLLG 72
Query: 398 YYYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ L +V YM GSL L RS G + L + +K +L + ++ G
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---G 126
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVTETRKASQKS 515
F H ++ + NVL+++D +SD GL + T + + APE S KS
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 516 DVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547
DV+SFG+LL E+ + G+ P DVV PR
Sbjct: 187 DVWSFGILLWEIYSFGRVPYPRIPLKDVV--PR 217
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---HLINFPTTATR- 496
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA H I++ T
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 497 --TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 340 EVLGKGSYGSTYKAIL--EDGTTV--VVKRLREVAATKREFEQQMEVVGTIGK---HSNV 392
EV+G+G +G Y L DG + VK L + Q G I K H NV
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 92
Query: 393 VPVRAYYY-SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + S+ LVV YM G L + RN + T D + L A+G+ ++
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL---IGFGLQVAKGMKYL 148
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--------LINFPTTATRTIGYRAP 503
S+ KF H ++ + N +L + ++D GLA ++ T A + + A
Sbjct: 149 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
E +T+K + KSDV+SFGVLL E++T AP
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK-- 132
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 13 LGKGKFGNVYLAREKQRKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 69
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 124
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 125 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E +G+G+ G+ Y A+ + G V ++++ K+E +V K+ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
Y DE VV Y+ GSL ++ T +D + + + F+HS +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--IG---YRAPEVTETRKASQ 513
H +IKS N+LL D + ++D G I P + R+ +G + APEV +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 514 KSDVYSFGVLLLEMLTGKAP 533
K D++S G++ +EM+ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E +G+G+ G+ Y A+ + G V ++++ K+E +V K+ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
Y DE VV Y+ GSL ++ T +D + + + F+HS +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--IG---YRAPEVTETRKASQ 513
H +IKS N+LL D + ++D G I P + R+ +G + APEV +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 514 KSDVYSFGVLLLEMLTGKAP 533
K D++S G++ +EM+ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 130
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---HLINFPTTATR- 496
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA H I++ T
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 497 --TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E +G+G+ G+ Y A+ + G V ++++ K+E +V K+ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
Y DE VV Y+ GSL ++ T +D + + + F+HS +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--IG---YRAPEVTETRKASQ 513
H +IKS N+LL D + ++D G I P + R+ +G + APEV +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 514 KSDVYSFGVLLLEMLTGKAP 533
K D++S G++ +EM+ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---HLINFPTTATR- 496
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA H I++ T
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 497 --TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSN-VVP 394
LGKG++GS Y + ++ G V VK+L+ +R+F+++++++ + HS+ +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIVK 76
Query: 395 VRAYYYSKDEK--LVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
R Y + +V Y+P+G L F+ HR R D L ++S++ +G+ +
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEY 130
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-------TATRTIGYRAP 503
+ G + H ++ + N+L+ + + I+D GLA L+ I + AP
Sbjct: 131 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E S++SDV+SFGV+L E+ T
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 15 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 71
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 126
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 127 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---HLINFPTTATR- 496
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA H I++ T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 497 --TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E +G+G+ G+ Y A+ + G V ++++ K+E +V K+ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
Y DE VV Y+ GSL ++ T +D + + + F+HS +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---Q 137
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--IG---YRAPEVTETRKASQ 513
H +IKS N+LL D + ++D G I P + R+ +G + APEV +
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 514 KSDVYSFGVLLLEMLTGKAP 533
K D++S G++ +EM+ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 34/254 (13%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREF 376
GS + LED LGKG +G+ Y K IL V+ K E A + +
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFIL--ALKVLFKTQLEKAGVEHQL 59
Query: 377 EQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWN 435
+++E+ + +H N++ + Y++ ++ Y P G+++ L + +R D +
Sbjct: 60 RREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118
Query: 436 SRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492
+ + A +++ HS+ + H +IK N+LL + I+D G + ++ P+
Sbjct: 119 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRR 167
Query: 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRS 551
T T+ Y PE+ E R +K D++S GVL E L G P + + + R
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET------YRR 221
Query: 552 VVREEWTAEVFDVE 565
+ R E+T F E
Sbjct: 222 ISRVEFTFPDFVTE 235
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSN-VVP 394
LGKG++GS Y + ++ G V VK+L+ +R+F+++++++ + HS+ +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIVK 75
Query: 395 VRAYYYSKDEK--LVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
R Y + +V Y+P+G L F+ HR R D L ++S++ +G+ +
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEY 129
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT-------ATRTIGYRAP 503
+ G + H ++ + N+L+ + + I+D GLA L+ I + AP
Sbjct: 130 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E S++SDV+SFGV+L E+ T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---HLINFPTTATR- 496
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA H I++ T
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 497 --TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G ++ L + + D A +++ HS+
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKL-----SKFDEQRTATYITELANALSYCHSK-- 132
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 19 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 75
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 130
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P TT T+ Y PE+ E R
Sbjct: 131 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK-- 132
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P TT T+ Y PE E R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHD 189
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQ 535
+K D++S GVL E L GK P +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 131/289 (45%), Gaps = 51/289 (17%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRL--------REVAATKREFEQQMEVVGTIGKHSNV 392
+GKG +G +K +++D + V +K L E+ +EF++++ ++ + H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNI 85
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V + Y + +V ++P G L+ HR D + W+ ++++ L A GI ++
Sbjct: 86 V--KLYGLMHNPPRMVMEFVPCGDLY---HR-LLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 453 SEGGAKFTHGNIKSSNVLLTQ-DLNG--C--ISDVGLAH---------LINFPTTATRTI 498
++ H +++S N+ L D N C ++D GL+ L NF A TI
Sbjct: 140 NQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI 198
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558
G E ++K+D YSF ++L +LTG+ P + + + +++REE
Sbjct: 199 G------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-----NMIREEGL 247
Query: 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+D + ++++ C + P RP +V+ + ++
Sbjct: 248 RPTIP------EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 37/217 (17%)
Query: 337 ASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPV 395
A E +GKG YG ++ + G +V VK + ++ + ++ E+ T+ +H N++
Sbjct: 11 ALVECVGKGRYGEVWRGLWH-GESVAVKIFS--SRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 396 RAYYY----SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
A S + ++ Y GSL+ L R + AL ++A+ A G+A +
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLAL------RLAVSAACGLAHL 121
Query: 452 HSE-----GGAKFTHGNIKSSNVLLTQDLNGCISDVGLA----------HLINFPTTATR 496
H E G H + KS NVL+ +L CI+D+GLA + N P T+
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 497 TIGYRAPEV------TETRKASQKSDVYSFGVLLLEM 527
Y APEV T+ ++ + +D+++FG++L E+
Sbjct: 182 R--YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 342 LGKGSYGST----YKAILED-GTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSN-VVP 394
LGKG++GS Y + ++ G V VK+L+ +R+F+++++++ + HS+ +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIVK 88
Query: 395 VRAYYYSKDEK--LVVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
R Y + +V Y+P+G L F+ HR R D L ++S++ +G+ +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEY 142
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT-------ATRTIGYRAP 503
+ G + H ++ + N+L+ + + I+D GLA L+ I + AP
Sbjct: 143 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT 529
E S++SDV+SFGV+L E+ T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 28/227 (12%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKRE-FEQQMEVVGTIGKHSNVVP 394
LG+G++G + A +D V VK L+E + + R+ F+++ E++ T+ +H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL-TMLQHQHIVR 84
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGT-----ALDWNSRMKIALGT 444
L+V+ YM G L L + D GG L + +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---NFPTTATRT---I 498
A G+ ++ G F H ++ + N L+ Q L I D G++ I ++ RT I
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
+ PE RK + +SDV+SFGV+L E+ T GK P + + +D
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ +Y G+L L R G + + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E LG+GSYGS YKAI ++ +V + V + +E +++ ++ +VV Y
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS-PHVVKYYGSY 93
Query: 400 YSKDEKLVVYSYMPAGSLFMLLH-RNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+ + +V Y AGS+ ++ RN++ L + I T +G+ ++H +
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKT-----LTEDEIATILQSTLKGLEYLHF---MR 145
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIG---YRAPEVTETRKASQK 514
H +IK+ N+LL + + ++D G+A L + IG + APEV + +
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 515 SDVYSFGVLLLEMLTGKAP 533
+D++S G+ +EM GK P
Sbjct: 206 ADIWSLGITAIEMAEGKPP 224
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 28/227 (12%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKRE-FEQQMEVVGTIGKHSNVVP 394
LG+G++G + A +D V VK L+E + + R+ F+++ E++ T+ +H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL-TMLQHQHIVR 78
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGT-----ALDWNSRMKIALGT 444
L+V+ YM G L L + D GG L + +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---NFPTTATRT---I 498
A G+ ++ G F H ++ + N L+ Q L I D G++ I ++ RT I
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
+ PE RK + +SDV+SFGV+L E+ T GK P + + +D
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK-- 128
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + + P TT + T+ Y PE+ E R
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 128
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----TATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P+ T T+ Y PE+ E R
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHD 185
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF------PTTA 494
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G +G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 100
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 153
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHD 210
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G +G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G +G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 340 EVLGKGSYGSTYKA-ILEDGTTV--VVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVP 394
+V+G+G++G KA I +DG + +KR++E A+ R+F ++EV+ +G H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNR-----------SDGGTALDWNSRMKIALG 443
+ + + Y P G+L L ++R + + L + A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--HLINFPTTATRT-IGY 500
ARG+ ++ + +F H N+ + N+L+ ++ I+D GL+ + T R + +
Sbjct: 148 VARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 204
Query: 501 RAPEVTETRKASQKSDVYSFGVLLLEMLT 529
A E + SDV+S+GVLL E+++
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G +G A ++ TV VK L++ A K + +ME++ IGKH N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK-- 127
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P T T+ Y PE+ E R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGRMHD 184
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 76
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 129
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHD 186
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 342 LGKGSYGSTY--KAILEDG------TTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G +AI D T V VK L+ A K + +ME++ IGKH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR------------MK 439
++ + V+ Y G+L L + R G +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL-QAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---HLINFPTTATR 496
A ARG+ ++ S+ K H ++ + NVL+T+D I+D GLA H I++ T
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 497 ---TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVLL E+ T G +P
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 72
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK 127
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P T T+ Y PE+ E R
Sbjct: 128 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 19 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 75
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 130
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 131 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQ 535
+K D++S GVL E L GK P +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 72
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 127
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 128 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQ 535
+K D++S GVL E L GK P +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
+G G +G + + V +K +RE A ++ +F ++ EV+ + H +V +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 73
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ +V+ +M G L L R G A + + + + L G+A++ A H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQR--GLFAAE--TLLGMCLDVCEGMAYLEE---ASVIH 126
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLI--NFPTTATRT---IGYRAPEVTETRKASQKSD 516
++ + N L+ ++ +SD G+ + + T++T T + + +PEV + S KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFGVL+ E+ + GK P ++ + +VV+
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 128
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P T T+ Y PE+ E R
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHD 185
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 72
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 127
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P T T+ Y PE+ E R
Sbjct: 128 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 76
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 129
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I++ G + ++ P TT T+ Y PE+ E R
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 186
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 19 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 75
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 130
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK 510
+ H +IK N+LL I++ G + ++ P TT T+ Y PE+ E R
Sbjct: 131 ---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK-- 132
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P T T+ Y PE+ E R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHD 189
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQ 535
+K D++S GVL E L GK P +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 72
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 127
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P T T+ Y PE+ E R
Sbjct: 128 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G F H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 166 MG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 19 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 75
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 130
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 131 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQ 535
+K D++S GVL E L GK P +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK-- 130
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHD 187
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
+G G +G + + V +K +RE A ++ +F ++ EV+ + H +V +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 76
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ +V+ +M G L L R G A + + + + L G+A++ A H
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQR--GLFAAE--TLLGMCLDVCEGMAYLEE---ACVIH 129
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLI--NFPTTATRT---IGYRAPEVTETRKASQKSD 516
++ + N L+ ++ +SD G+ + + T++T T + + +PEV + S KSD
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFGVL+ E+ + GK P ++ + +VV+
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSEVVE 218
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GLA ++ + P A T G + +PE
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 342 LGKGSYGSTYKAILEDGT-----TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E A + + +++E+ + +H N++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y++ ++ Y P G ++ L + + D A +++ HS+
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKL-----SKFDEQRTATYITELANALSYCHSK-- 132
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKAS 512
+ H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMHD 189
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
+G G +G + + V +K +RE A ++ +F ++ EV+ + H +V +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 71
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ +V+ +M G L L R G A + + + + L G+A++ A H
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQR--GLFAAE--TLLGMCLDVCEGMAYLEE---ACVIH 124
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLI--NFPTTATRT---IGYRAPEVTETRKASQKSD 516
++ + N L+ ++ +SD G+ + + T++T T + + +PEV + S KSD
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFGVL+ E+ + GK P ++ + +VV+
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVE 213
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 342 LGKGSYGSTYKAIL--------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSN 391
LG+G++G A ++ TV VK L++ A + + +ME++ IGKH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKI 440
++ + V+ Y G+L L R G + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
ARG+ ++ S+ K H ++ + NVL+T++ I+D GLA IN +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + APE R + +SDV+SFGVL+ E+ T G +P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 342 LGKGSYGSTY-------KAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
LGKG +G+ Y K IL V+ K E A + + +++E+ + +H N++
Sbjct: 16 LGKGKFGNVYLAREKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 72
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y++ ++ Y P G+++ L + + D A +++ HS+
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSK 127
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRK 510
+ H +IK N+LL I+D G + ++ P++ T+ Y PE+ E R
Sbjct: 128 ---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++S GVL E L GK P + + + +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREV-------AATKREFEQQMEVVGTIGKHSNV 392
E +G+G+YG YKA G T +K++R + T RE E+ KHSN+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNI 62
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V + ++K ++V+ ++ +L + +GG L+ + L GIA+ H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLL---DVCEGG--LESVTAKSFLLQLLNGIAYCH 117
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEV-TE 507
+ H ++K N+L+ ++ I+D GLA P T T+ YRAP+V
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPL 534
++K S D++S G + EM+ G APL
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG-APL 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 126/278 (45%), Gaps = 33/278 (11%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
+G G +G + + V +K +RE A ++ +F ++ EV+ + H +V +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 73
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ +V+ +M G L L R G A + + + + L G+A++ A H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQR--GLFAAE--TLLGMCLDVCEGMAYLEE---ACVIH 126
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLI--NFPTTATRT---IGYRAPEVTETRKASQKSD 516
++ + N L+ ++ +SD G+ + + T++T T + + +PEV + S KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
V+SFGVL+ E+ + GK P ++ + +VV D+ R ++ L
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR----------LYKPRLAS------ 230
Query: 575 EMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612
+ QI C + P+ RP ++R + +I + L
Sbjct: 231 --THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 28/226 (12%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR-EFEQQMEVVGTIGKHSNVVP 394
LG+G++G + A +D V VK L++ + R +F ++ E++ + +H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVK 79
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG--------GTALDWNSRMKIALGTAR 446
D ++V+ YM G L L + D T L + + IA A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IG 499
G+ ++ S+ F H ++ + N L+ ++L I D G++ + + T R I
Sbjct: 140 GMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDV-YSTDYYRVGGHTMLPIR 195
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
+ PE RK + +SDV+S GV+L E+ T GK P +++V++
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 241
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
+V+G GS+G Y+A L D G V +K++ + A K Q M + H N+V +R +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL----DHCNIVRLRYF 81
Query: 399 YYSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+YS EK +V Y+PA + H +R+ + + L R +A+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 139
Query: 453 SEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE 504
S G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 505 -VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 339 AEVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATKR--EFEQQMEVVGTIGKHSN 391
+VLG G++G+ YK I + +G TV +K L E K EF + ++ ++ H +
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPH 78
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+V + S +LV MP G L +H ++ + G+ L N ++IA +G+ ++
Sbjct: 79 LVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA----KGMMYL 133
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------EV 505
+ H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
RK + +SDV+S+GV + E++T
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 51/289 (17%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRL--------REVAATKREFEQQMEVVGTIGKHSNV 392
+GKG +G +K +++D + V +K L E+ +EF++++ ++ + H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNI 85
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V + Y + +V ++P G L+ HR D + W+ ++++ L A GI ++
Sbjct: 86 V--KLYGLMHNPPRMVMEFVPCGDLY---HR-LLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 453 SEGGAKFTHGNIKSSNVLLTQ-DLNG--C--ISDVGLAH---------LINFPTTATRTI 498
++ H +++S N+ L D N C ++D G + L NF A TI
Sbjct: 140 NQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETI 198
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558
G E ++K+D YSF ++L +LTG+ P + + + +++REE
Sbjct: 199 G------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-----NMIREEGL 247
Query: 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+D + ++++ C + P RP +V+ + ++
Sbjct: 248 RPTIP------EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 51/289 (17%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRL--------REVAATKREFEQQMEVVGTIGKHSNV 392
+GKG +G +K +++D + V +K L E+ +EF++++ ++ + H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNI 85
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V + Y + +V ++P G L+ HR D + W+ ++++ L A GI ++
Sbjct: 86 V--KLYGLMHNPPRMVMEFVPCGDLY---HR-LLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 453 SEGGAKFTHGNIKSSNVLLTQ-DLNG--C--ISDVGLAH---------LINFPTTATRTI 498
++ H +++S N+ L D N C ++D L+ L NF A TI
Sbjct: 140 NQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETI 198
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558
G E ++K+D YSF ++L +LTG+ P + + + +++REE
Sbjct: 199 G------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-----NMIREEGL 247
Query: 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+D + ++++ C + P RP +V+ + ++
Sbjct: 248 RPTIP------EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 339 AEVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATKR--EFEQQMEVVGTIGKHSN 391
+VLG G++G+ YK I + +G TV +K L E K EF + ++ ++ H +
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPH 101
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+V + S +LV MP G L +H ++ + G+ L N ++IA +G+ ++
Sbjct: 102 LVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA----KGMMYL 156
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------EV 505
+ H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
RK + +SDV+S+GV + E++T
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 340 EVLGKGSYGSTYKA-ILEDGTTV--VVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVP 394
+V+G+G++G KA I +DG + +KR++E A+ R+F ++EV+ +G H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNR-----------SDGGTALDWNSRMKIALG 443
+ + + Y P G+L L ++R + + L + A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--HLINFPTTATRT-IGY 500
ARG+ ++ + +F H ++ + N+L+ ++ I+D GL+ + T R + +
Sbjct: 141 VARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 197
Query: 501 RAPEVTETRKASQKSDVYSFGVLLLEMLT 529
A E + SDV+S+GVLL E+++
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 340 EVLGKGSYGSTYKA-ILEDGTTV--VVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVP 394
+V+G+G++G KA I +DG + +KR++E A+ R+F ++EV+ +G H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNR-----------SDGGTALDWNSRMKIALG 443
+ + + Y P G+L L ++R + + L + A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--HLINFPTTATRT-IGY 500
ARG+ ++ + +F H ++ + N+L+ ++ I+D GL+ + T R + +
Sbjct: 151 VARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 207
Query: 501 RAPEVTETRKASQKSDVYSFGVLLLEMLT 529
A E + SDV+S+GVLL E+++
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 342 LGKGSYGSTYKAILE---DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG+G G +Y ++E DG +KR+ RE Q+ + + H N++ + AY
Sbjct: 37 LGEG--GFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 399 YY----SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+K E ++ + G+L+ + R + D G L + + + LG RG+ IH++
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLK-DKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR-------------TIGYR 501
G + H ++K +N+LL + + D+G + +R TI YR
Sbjct: 154 G---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 502 APEVTETRKAS---QKSDVYSFGVLLLEMLTGKAP 533
APE+ + +++DV+S G +L M+ G+ P
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 342 LGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
+G+GS G A + G V VK++ +RE V+ H NVV + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460
DE VV ++ G+L ++ R ++ + L R ++++H++G
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIATVCLSVLRALSYLHNQG---VI 163
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
H +IKS ++LLT D +SD G ++ + T + APEV + D
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 517 VYSFGVLLLEMLTGKAP 533
++S G++++EM+ G+ P
Sbjct: 224 IWSLGIMVIEMIDGEPP 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 42/284 (14%)
Query: 340 EVLGKGSYGSTYKAILE--DGTTVVVKRLREVAATKREFEQQMEVVGTIG-----KHSNV 392
+V+G G +G YK +L+ G V ++ + A E +Q+++ +G G H N+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHNI 108
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + +++ YM G+L L R + + L ++ G A G+ ++
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLR---GIAAGMKYL- 163
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IGYRAPEV 505
+ H ++ + N+L+ +L +SD GL+ ++ AT T I + APE
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 506 TETRKASQKSDVYSFGVLLLEMLT-GKAPL-QHSGHDDVVDLPRWVRSVVREEWTAEVFD 563
RK + SDV+SFG+++ E++T G+ P + S H+ + + R + + ++
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY- 280
Query: 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
Q+ + C + RPK D+V +++++
Sbjct: 281 -----------------QLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 40/220 (18%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGT-IGKHSNVVPV--- 395
E++G+G YG+ YK L D V VK A ++ F + + + +H N+
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFS--FANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 396 --RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
R + E L+V Y P GSL L + SD W S ++A RG+A++H+
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAHSVTRGLAYLHT 129
Query: 454 E--GGAKF----THGNIKSSNVLLTQDLNGCISDVGLAHLI------------NFPTTAT 495
E G + +H ++ S NVL+ D ISD GL+ + N +
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 496 RTIGYRAPEVTE-------TRKASQKSDVYSFGVLLLEML 528
TI Y APEV E A ++ D+Y+ G++ E+
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 82
Query: 400 YSKDEKL-VVY-----SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK VVY Y+P + H +R+ + + L R +A+IHS
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 140
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 193
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 97
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 153
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 154 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 256
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 257 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL ++ + P A T G + +PE
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 83
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 141
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 142 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 194
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 247
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 342 LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
LG G YG Y + + + TV VK L+E EF ++ V+ I KH N+V +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 98
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460
+ +V YMP G+L L + TA+ + +A + + ++ + F
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYLEKKN---FI 152
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQKS 515
H ++ + N L+ ++ ++D GL+ L+ T I + APE S KS
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 516 DVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
DV++FGVLL E+ T G +P V DL
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDL 243
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 107
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 163
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 164 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 266
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 267 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 82
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 140
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 193
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 94
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 152
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 205
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 258
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 80
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V YM GSL L ++ + T + ++ G A G+ ++
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 136
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 137 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 239
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 240 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 86
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 144
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 145 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 197
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 250
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 82
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 140
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 193
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREV-------AATKREFEQQMEVVGTIGKHSNV 392
E +G+G+YG YKA G T +K++R + T RE E+ KHSN+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNI 62
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V + ++K ++V+ ++ +L + +GG L+ + L GIA+ H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLL---DVCEGG--LESVTAKSFLLQLLNGIAYCH 117
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEV-TE 507
+ H ++K N+L+ ++ I+D GLA P T T+ YRAP+V
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 508 TRKASQKSDVYSFGVLLLEMLTG 530
++K S D++S G + EM+ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 101
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 159
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 160 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 212
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 265
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFE-----QQMEVVGTIGKHSNVVP 394
E LG G+Y + YK + + TT V L+EV E +++ ++ + KH N+V
Sbjct: 11 EKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVR 67
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ +++++ +V+ +M + R + L+ N +G+AF H
Sbjct: 68 LYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEV-TETR 509
K H ++K N+L+ + + D GLA P ++ T+ YRAP+V +R
Sbjct: 128 ---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 510 KASQKSDVYSFGVLLLEMLTGK 531
S D++S G +L EM+TGK
Sbjct: 185 TYSTSIDIWSCGCILAEMITGK 206
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 90
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 148
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 149 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 201
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 254
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 270
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 271 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMAT 325
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H N+ + N L+ ++ ++D GL+ L+ T
Sbjct: 326 QISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREE 556
I + APE K S KSDV++FGVLL E+ T G +P + G +DL + V ++ +
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPG----IDLSQ-VYELLEK- 434
Query: 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
D + + + E++ ++++ +C P RP ++ + E + Q
Sbjct: 435 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 478
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 309
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 310 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 364
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H N+ + N L+ ++ ++D GL+ L+ T
Sbjct: 365 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 421
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREE 556
I + APE K S KSDV++FGVLL E+ T G +P + G +DL + V ++ +
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPG----IDLSQ-VYELLEK- 473
Query: 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
D + + + E++ ++++ +C P RP ++ + E + Q
Sbjct: 474 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 517
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREV-------AATKREFEQQMEVVGTIGKHSNV 392
E +G+G+YG YKA G T +K++R + T RE E+ KHSN+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNI 62
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V + ++K ++V+ ++ +L + +GG L+ + L GIA+ H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLL---DVCEGG--LESVTAKSFLLQLLNGIAYCH 117
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEV-TE 507
+ H ++K N+L+ ++ I+D GLA P T T+ YRAP+V
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 508 TRKASQKSDVYSFGVLLLEMLTG 530
++K S D++S G + EM+ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 25/233 (10%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVV-VKRLR-EVAATKREFEQQM---EVVGTIGKHSNVVP 394
++LGKGS+G + A + +K L+ +V + E M V+ +H +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ + +K+ V Y+ G L + D + A G+ F+HS+
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQ-----SCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRK 510
G + ++K N+LL +D + I+D G+ T T Y APE+ +K
Sbjct: 138 G---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQ--------HSGHDDVVDLPRWVRSVVRE 555
+ D +SFGVLL EML G++P HS D PRW+ ++
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 94
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 152
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 205
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 258
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 37/214 (17%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG YG ++ + G V VK + ++ + ++ E+ T+ +H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 399 ----YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH-- 452
+S + ++ Y GSL+ L T LD S ++I L A G+A +H
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 453 ---SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----------NFPTTATRTIG 499
++G H ++KS N+L+ ++ CI+D+GLA + N P T+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR-- 182
Query: 500 YRAPEV------TETRKASQKSDVYSFGVLLLEM 527
Y APEV + + ++ D+++FG++L E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 37/214 (17%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG YG ++ + G V VK + ++ + ++ E+ T+ +H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 399 ----YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH-- 452
+S + ++ Y GSL+ L T LD S ++I L A G+A +H
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 453 ---SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----------NFPTTATRTIG 499
++G H ++KS N+L+ ++ CI+D+GLA + N P T+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR-- 182
Query: 500 YRAPEV------TETRKASQKSDVYSFGVLLLEM 527
Y APEV + + ++ D+++FG++L E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 37/214 (17%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG YG ++ + G V VK + ++ + ++ E+ T+ +H N++ A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 399 ----YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH-- 452
+S + ++ Y GSL+ L T LD S ++I L A G+A +H
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 453 ---SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----------NFPTTATRTIG 499
++G H ++KS N+L+ ++ CI+D+GLA + N P T+
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR-- 211
Query: 500 YRAPEV------TETRKASQKSDVYSFGVLLLEM 527
Y APEV + + ++ D+++FG++L E+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 28/234 (11%)
Query: 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYF 81
Query: 399 YYSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+YS EK +V Y+P + H +R+ + + L R +A+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 139
Query: 453 SEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE 504
S G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 192
Query: 505 -VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 267
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 268 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 322
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H N+ + N L+ ++ ++D GL+ L+ T
Sbjct: 323 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 379
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREE 556
I + APE K S KSDV++FGVLL E+ T G +P + G +DL + V ++ +
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPG----IDLSQ-VYELLEK- 431
Query: 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
D + + + E++ ++++ +C P RP ++ + E + Q
Sbjct: 432 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 475
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 65 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 119
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-----FPTTATRT 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ P A
Sbjct: 120 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
+G G +G + + V +K +RE A ++ +F ++ EV+ + H +V +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 74
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ +V +M G L L R G A + + + + L G+A++ A H
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQR--GLFAAE--TLLGMCLDVCEGMAYLEE---ACVIH 127
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLI--NFPTTATRT---IGYRAPEVTETRKASQKSD 516
++ + N L+ ++ +SD G+ + + T++T T + + +PEV + S KSD
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544
V+SFGVL+ E+ + GK P ++ + +VV+
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVE 216
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 95
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 153
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 154 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPEL 206
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 259
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 322 LDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFE 377
+D S N+D ++ R + LG G YG Y+ + + + TV VK L+E EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 378 QQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNS 436
++ V+ I KH N+V + + ++ +M G+L L NR + +
Sbjct: 63 KEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---- 117
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR 496
+ +A + + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAH 174
Query: 497 T-----IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 340 EVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSN 391
E LG+ +G YK L E V +K L++ A + EF + + + +H N
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPN 90
Query: 392 VVPVRAYYYSKDEKL-VVYSYMPAGSL--FMLLHRNRSDGGT---------ALDWNSRMK 439
VV + +KD+ L +++SY G L F+++ SD G+ AL+ +
Sbjct: 91 VVCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL------AHLINFPTT 493
+ A G+ ++ S H ++ + NVL+ LN ISD+GL A
Sbjct: 150 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV--------- 543
+ I + APE K S SD++S+GV+L E+ + G P + DVV
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 266
Query: 544 ----DLPRWVRSVVREEW 557
D P WV +++ E W
Sbjct: 267 PCPDDCPAWVYALMIECW 284
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFF 116
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 174
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPEL 227
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 120
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-----FPTTATRT 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ P A
Sbjct: 121 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 358 GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415
G V V+R+ A + F Q V + H N+VP RA + + +E VV S+M G
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 111
Query: 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD- 474
S L+ + DG L + I G + + +IH G + H ++K+S++L++ D
Sbjct: 112 SAKDLICTHFMDGMNEL---AIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDG 165
Query: 475 ---LNGCISDVGL-AH------LINFPTTATRTIGYRAPEVTET--RKASQKSDVYSFGV 522
L+G S++ + +H + +FP + + + + +PEV + + KSD+YS G+
Sbjct: 166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 225
Query: 523 LLLEMLTGKAPLQ 535
E+ G P +
Sbjct: 226 TACELANGHVPFK 238
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFF 87
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 145
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 146 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPEL 198
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 251
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 326 YF-NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVG 384
YF + D E+L E +GKGS+G +K I VV ++ ++ + E E + +
Sbjct: 19 YFQSMDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI- 76
Query: 385 TIGKHSNVVPVRAYY--YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIA 441
T+ + V YY Y KD KL ++ Y+ GS LL LD I
Sbjct: 77 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATIL 130
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIG- 499
+G+ ++HSE K H +IK++NVLL++ ++D G+A L + +G
Sbjct: 131 REILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 187
Query: 500 --YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
+ APEV + K+D++S G+ +E+ G+ P
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFF 110
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 168
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 169 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPEL 221
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 322 LDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFE 377
+D S N+D ++ R + LG G YG Y+ + + + TV VK L+E EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 378 QQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNS 436
++ V+ I KH N+V + + ++ +M G+L L NR + +
Sbjct: 63 KEAAVMKEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV---- 117
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR 496
+ +A + + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 497 T-----IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 25/233 (10%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVV-VKRLR-EVAATKREFEQQM---EVVGTIGKHSNVVP 394
++LGKGS+G + A + +K L+ +V + E M V+ +H +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ + +K+ V Y+ G L + D + A G+ F+HS+
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQ-----SCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRK 510
G + ++K N+LL +D + I+D G+ T T Y APE+ +K
Sbjct: 139 G---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQ--------HSGHDDVVDLPRWVRSVVRE 555
+ D +SFGVLL EML G++P HS D PRW+ ++
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 248
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 340 EVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSN 391
E LG+ +G YK L E V +K L++ A + EF + + + +H N
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPN 73
Query: 392 VVPVRAYYYSKDEKL-VVYSYMPAGSL--FMLLHRNRSDGGTALDWNSRMKIAL------ 442
VV + +KD+ L +++SY G L F+++ SD G+ D + +K AL
Sbjct: 74 VVCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD-DRTVKSALEPPDFV 131
Query: 443 ----GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL------AHLINFPT 492
A G+ ++ S H ++ + NVL+ LN ISD+GL A
Sbjct: 132 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV-------- 543
+ I + APE K S SD++S+GV+L E+ + G P + DVV
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 248
Query: 544 -----DLPRWVRSVVREEWTAEVFDVELLKYQDVEEEM 576
D P WV +++ E W F +++D+ +
Sbjct: 249 LPCPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 284
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 358 GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415
G V V+R+ A + F Q V + H N+VP RA + + +E VV S+M G
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 95
Query: 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD- 474
S L+ + DG L + I G + + +IH G + H ++K+S++L++ D
Sbjct: 96 SAKDLICTHFMDGMNEL---AIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDG 149
Query: 475 ---LNGCISDVGL-AH------LINFPTTATRTIGYRAPEVTET--RKASQKSDVYSFGV 522
L+G S++ + +H + +FP + + + + +PEV + + KSD+YS G+
Sbjct: 150 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 209
Query: 523 LLLEMLTGKAPLQ 535
E+ G P +
Sbjct: 210 TACELANGHVPFK 222
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFF 120
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 178
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 179 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPEL 231
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 284
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFF 116
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 174
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPEL 227
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 322 LDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFE 377
+D S N+D ++ R + LG G YG Y+ + + + TV VK L+E EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 378 QQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNS 436
++ V+ I KH N+V + + ++ +M G+L L NR + +
Sbjct: 63 KEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---- 117
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR 496
+ +A + + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 497 T-----IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 16/220 (7%)
Query: 322 LDGSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQM 380
+D +Y +++E LG G YG Y+ + + + TV VK L+E EF ++
Sbjct: 3 MDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 381 EVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMK 439
V+ I KH N+V + + ++ +M G+L L NR + + +
Sbjct: 63 AVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLY 117
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-- 497
+A + + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 118 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFF 118
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 176
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 177 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPEL 229
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 282
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 322 LDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFE 377
+D S N+D ++ R + LG G YG Y+ + + + TV VK L+E EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 378 QQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNS 436
++ V+ I KH N+V + + ++ +M G+L L NR + +
Sbjct: 63 KEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---- 117
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR 496
+ +A + + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 497 T-----IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+V+G GS+G Y+A L D +V +++V KR ++++++ + H N+V +R ++
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFF 161
Query: 400 YSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
YS EK +V Y+P + H +R+ + + L R +A+IHS
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 219
Query: 454 EGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE- 504
G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 220 FG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPEL 272
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 325
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKR--LREVAATKREFEQQMEVVGT 385
+++L++++ + A + + +Y + K V +KR L + + E ++++ +
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKK------EKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 386 IGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG---GTALDWNSRMKIAL 442
H N+V + KDE +V + GS+ ++ + G LD ++ I
Sbjct: 65 C-HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------ 496
G+ ++H G H ++K+ N+LL +D + I+D G++ + TR
Sbjct: 124 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 497 ---TIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL-----PR 547
T + APEV E R K+D++SFG+ +E+ TG AP V+ L P
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP 240
Query: 548 WVRSVVREEWTAEVFDVELL-KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602
+ + V+ D E+L KY +M+ + C+ K P+ RP +++R
Sbjct: 241 SLETGVQ--------DKEMLKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 282
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 341 VLGKGSYGSTYKA-ILEDGTTVVVKRLR-EVAATKREFEQQM---EVVGTIGKHSNVVPV 395
VLGKGS+G A + E G VK L+ +V + E M ++ H + +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS-DGGTALDWNSRMKIALGTARGIAFIHSE 454
+ + D V ++ G L + ++R D A + + + AL F+H +
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISAL------MFLHDK 143
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--LINFPTTATR--TIGYRAPEVTETRK 510
G + ++K NVLL + + ++D G+ + N TTAT T Y APE+ +
Sbjct: 144 G---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD 544
D ++ GVLL EML G AP + DD+ +
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 322 LDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFE 377
+D S N+D ++ R + LG G YG Y+ + + + TV VK L+E EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 378 QQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNS 436
++ V+ I KH N+V + + ++ +M G+L L NR + +
Sbjct: 63 KEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---- 117
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR 496
+ +A + + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 497 T-----IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 30/234 (12%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
+V+G GS+G Y+A L D G V +K++ + A K Q M + H N+V +R +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL----DHCNIVRLRYF 81
Query: 399 YYSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+YS EK +V Y+P + H +R+ + + L R +A+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 139
Query: 453 SEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE 504
S G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 192
Query: 505 -VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 30/234 (12%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
+V+G GS+G Y+A L D G V +K++ + A K Q M + H N+V +R +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD----HCNIVRLRYF 81
Query: 399 YYSKDEKL------VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+YS EK +V Y+P + H +R+ + + L R +A+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 139
Query: 453 SEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI-----NFPTTATRTIGYRAPE 504
S G H +IK N+LL D L C D G A + N +R YRAPE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 192
Query: 505 -VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSGHDDVVDLPRWVRSVVREE 556
+ + DV+S G +L E+L G+ SG D +V++ + + + RE+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKR--LREVAATKREFEQQMEVVGT 385
+++L++++ + A + + +Y + K V +KR L + + E ++++ +
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKK------EKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 386 IGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG---GTALDWNSRMKIAL 442
H N+V + KDE +V + GS+ ++ + G LD ++ I
Sbjct: 70 C-HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------ 496
G+ ++H G H ++K+ N+LL +D + I+D G++ + TR
Sbjct: 129 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 497 ---TIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL-----PR 547
T + APEV E R K+D++SFG+ +E+ TG AP V+ L P
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP 245
Query: 548 WVRSVVREEWTAEVFDVELL-KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602
+ + V+ D E+L KY +M+ + C+ K P+ RP +++R
Sbjct: 246 SLETGVQ--------DKEMLKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 287
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 18/214 (8%)
Query: 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI 386
+ D E+L E +GKGS+G +K I VV ++ ++ + E E + + T+
Sbjct: 1 MSLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TV 58
Query: 387 GKHSNVVPVRAYY--YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALG 443
+ V YY Y KD KL ++ Y+ GS LL LD I
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILRE 112
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIG--- 499
+G+ ++HSE K H +IK++NVLL++ ++D G+A L + +G
Sbjct: 113 ILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF 169
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
+ APEV + K+D++S G+ +E+ G+ P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 330 DLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKH 389
D E+L E +GKGS+G +K I VV ++ ++ + E E + + T+
Sbjct: 19 DPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQ 76
Query: 390 SNVVPVRAYY--YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446
+ V YY Y KD KL ++ Y+ GS LL LD I +
Sbjct: 77 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILK 130
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIG---YRA 502
G+ ++HSE K H +IK++NVLL++ ++D G+A L + +G + A
Sbjct: 131 GLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMA 187
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
PEV + K+D++S G+ +E+ G+ P
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
+G+GS G A + G V VK++ +RE V+ +H NVV + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460
DE VV ++ G+L ++ R ++ + L + ++ +H++G
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG---VI 149
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
H +IKS ++LLT D +SD G ++ + T + APE+ + D
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 517 VYSFGVLLLEMLTGKAP 533
++S G++++EM+ G+ P
Sbjct: 210 IWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
+G+GS G A + G V VK++ +RE V+ +H NVV + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460
DE VV ++ G+L ++ R ++ + L + ++ +H++G
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG---VI 147
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
H +IKS ++LLT D +SD G ++ + T + APE+ + D
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 517 VYSFGVLLLEMLTGKAP 533
++S G++++EM+ G+ P
Sbjct: 208 IWSLGIMVIEMVDGEPP 224
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 45/286 (15%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLRE--VAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ V +K L+ +R+F + ++G H NV+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVI 97
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL-GTARGIAF-I 451
+ +++ +M GSL L +N DG + I L G RGIA +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTV-------IQLVGMLRGIAAGM 148
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---TATRTIG------YRA 502
+ H ++ + N+L+ +L +SD GL+ + T T T +G + A
Sbjct: 149 KYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561
PE + RK + SDV+S+G+++ E+++ G+ P + DV++ A
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN--------------AIE 254
Query: 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
D L D + Q++ L C K + RPK +V ++++
Sbjct: 255 QDYRLPPPMDCPSALHQLM---LDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
+G+GS G A + G V VK++ +RE V+ +H NVV + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460
DE VV ++ G+L ++ R ++ + L + ++ +H++G
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG---VI 138
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
H +IKS ++LLT D +SD G ++ + T + APE+ + D
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 517 VYSFGVLLLEMLTGKAP 533
++S G++++EM+ G+ P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 18/214 (8%)
Query: 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI 386
+ D E+L E +GKGS+G +K I VV ++ ++ + E E + + T+
Sbjct: 1 MSLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TV 58
Query: 387 GKHSNVVPVRAYY--YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALG 443
+ V YY Y KD KL ++ Y+ GS LL LD I
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILRE 112
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIG--- 499
+G+ ++HSE K H +IK++NVLL++ ++D G+A L + +G
Sbjct: 113 ILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 169
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
+ APEV + K+D++S G+ +E+ G+ P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
+G+GS G A + G V VK++ +RE V+ +H NVV + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460
DE VV ++ G+L ++ R ++ + L + ++ +H++G
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG---VI 142
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
H +IKS ++LLT D +SD G ++ + T + APE+ + D
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 517 VYSFGVLLLEMLTGKAP 533
++S G++++EM+ G+ P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 65 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 119
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 120 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 33/278 (11%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
+G G +G + + V +K ++E + ++ +F ++ EV+ + H +V +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKL-SHPKLVQLYGVCLE 93
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ +V+ +M G L L R G A + + + + L G+A++ A H
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQR--GLFAAE--TLLGMCLDVCEGMAYLEE---ACVIH 146
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLI--NFPTTATRT---IGYRAPEVTETRKASQKSD 516
++ + N L+ ++ +SD G+ + + T++T T + + +PEV + S KSD
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 517 VYSFGVLLLEMLT-GKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDVEE 574
V+SFGVL+ E+ + GK P ++ + +VV D+ R + V+
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY------------ 254
Query: 575 EMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612
QI C + P+ RP ++R + +I + L
Sbjct: 255 ------QIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 118/291 (40%), Gaps = 44/291 (15%)
Query: 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI 386
+D E VLGKG+YG Y D + V ++E+ + Q + +
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 58
Query: 387 GKHSNVVPVRAYYYSKDEKLVVYSYM---PAGSLFMLLHRNRSDGGTALDWNSRMKIALG 443
KH + Y S E + +M P GSL LL RS G D + I
Sbjct: 59 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL---RSKWGPLKD--NEQTIGFY 113
Query: 444 TAR---GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC--ISDVG----LAHLINFPTTA 494
T + G+ ++H + H +IK NVL+ +G ISD G LA + T
Sbjct: 114 TKQILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETF 169
Query: 495 TRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSV 552
T T+ Y APE+ + R + +D++S G ++EM TGK P G
Sbjct: 170 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG-------------- 215
Query: 553 VREEWTAEVFDVELLK-YQDVEEEM-VQMLQIALSCVAKVPDSRPKMDDVV 601
E A +F V + K + ++ E M + L C PD R +D++
Sbjct: 216 ---EPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 30/241 (12%)
Query: 309 SGVQEAEKNKLCFLDGSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLRE 368
S VQ+ +N + F DG D+ G GSY S K + T + ++
Sbjct: 8 SIVQQLHRNSIQFTDGYEVKEDI-----------GVGSY-SVCKRCIHKATNMEFA-VKI 54
Query: 369 VAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG 428
+ +KR+ +++E++ G+H N++ ++ Y VV M G L + R +
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--- 111
Query: 429 GTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC----ISDVGL 484
+ + + ++H++G H ++K SN+L + I D G
Sbjct: 112 --FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 485 AHLIN----FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540
A + T T + APEV E + D++S GVLL MLTG P +G D
Sbjct: 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA-NGPD 225
Query: 541 D 541
D
Sbjct: 226 D 226
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 131/296 (44%), Gaps = 49/296 (16%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
EV+G G +G + L+ + V +K L+ +REF + ++G +H N++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 80
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL-GTARGIAF-I 451
+ + +++ +M G+L L N DG + I L G RGIA +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTV-------IQLVGMLRGIASGM 131
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---TATRTIG------YRA 502
+ H ++ + N+L+ +L +SD GL+ + + T T ++G + A
Sbjct: 132 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561
PE RK + SD +S+G+++ E+++ G+ P + DV++ A
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN--------------AIE 237
Query: 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRAS 617
D L D + Q++ L C K ++RP+ VV ++++ +RN AS
Sbjct: 238 QDYRLPPPPDCPTSLHQLM---LDCWQKDRNARPRFPQVVSALDKM----IRNPAS 286
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
+G+GS G A + G V VK++ +RE V+ +H NVV + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460
DE VV ++ G+L ++ R ++ + L + ++ +H++G
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG---VI 192
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
H +IKS ++LLT D +SD G ++ + T + APE+ + D
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 517 VYSFGVLLLEMLTGKAP 533
++S G++++EM+ G+ P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 48/302 (15%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLRE--VAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ V +K L+ +R+F + ++G H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNII 72
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIA--LGTARGI-AF 450
+ +++ YM GSL L +N + R + +G RGI +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN----------DGRFTVIQLVGMLRGIGSG 122
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAP 503
+ + H ++ + N+L+ +L +SD G++ ++ + P A T G + AP
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562
E RK + SDV+S+G+++ E+++ G+ P + DV+ + E +
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-------KAIEEGY----- 230
Query: 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ-IQQPELRNRASSGTE 621
L D + + Q+ L C K RPK +V M+++ I+ P R +G+E
Sbjct: 231 --RLPPPMDCP---IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR--TGSE 283
Query: 622 SN 623
S+
Sbjct: 284 SS 285
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 131/296 (44%), Gaps = 49/296 (16%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
EV+G G +G + L+ + V +K L+ +REF + ++G +H N++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 78
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL-GTARGIAF-I 451
+ + +++ +M G+L L N DG + I L G RGIA +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTV-------IQLVGMLRGIASGM 129
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---TATRTIG------YRA 502
+ H ++ + N+L+ +L +SD GL+ + + T T ++G + A
Sbjct: 130 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561
PE RK + SD +S+G+++ E+++ G+ P + DV++ A
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN--------------AIE 235
Query: 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRAS 617
D L D + Q++ L C K ++RP+ VV ++++ +RN AS
Sbjct: 236 QDYRLPPPPDCPTSLHQLM---LDCWQKDRNARPRFPQVVSALDKM----IRNPAS 284
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 33/294 (11%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEV 382
GS +++E LG G YG Y+ + + + TV VK L+E EF ++ V
Sbjct: 1 GSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIA 441
+ I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 61 MKEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMA 115
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 116 TQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 498 -IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVRE 555
I + APE K S KSDV++FGVLL E+ T G +P + G D P V ++ +
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGID-----PSQVYELLEK 225
Query: 556 EWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
++ E + + E++ ++++ +C P RP ++ + E + Q
Sbjct: 226 DYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMAT 118
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 48/302 (15%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLRE--VAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ V +K L+ +R+F + ++G H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNII 78
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIA--LGTARGI-AF 450
+ +++ YM GSL L +N + R + +G RGI +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN----------DGRFTVIQLVGMLRGIGSG 128
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAP 503
+ + H ++ + N+L+ +L +SD G++ ++ + P A T G + AP
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562
E RK + SDV+S+G+++ E+++ G+ P + DV+ + E +
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-------KAIEEGY----- 236
Query: 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ-IQQPELRNRASSGTE 621
L D + + Q+ L C K RPK +V M+++ I+ P R +G+E
Sbjct: 237 --RLPPPMDCP---IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR--TGSE 289
Query: 622 SN 623
S+
Sbjct: 290 SS 291
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 68 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 122
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 123 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 35/277 (12%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVK--RLREVAATK-REFEQQMEVVGTIGKHSNVVPVRAY 398
L + G +K + G +VVK ++R+ + K R+F ++ + I H NV+PV
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRL-RIFSHPNVLPVLGA 75
Query: 399 YYSKD--EKLVVYSYMPAGSLFMLLHRNRSDGGT--ALDWNSRMKIALGTARGIAFIHSE 454
S ++ +MP GSL+ +LH GT +D + +K AL ARG+AF+H+
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHE-----GTNFVVDQSQAVKFALDMARGMAFLHTL 130
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAPEVTETRKAS-- 512
H + S +V++ +D+ IS + P + APE + +
Sbjct: 131 EPLIPRHA-LNSRSVMIDEDMTARISMADVKFSFQSPGRMY-APAWVAPEALQKKPEDTN 188
Query: 513 -QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571
+ +D++SF VLL E++T + P + ++ V E +
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFADLSNMEI------GMKVALEGLRPTI-------PPG 235
Query: 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608
+ + ++++I C+ + P RPK D +V ++E++Q
Sbjct: 236 ISPHVSKLMKI---CMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 118
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
+G+GS G A + G V VK++ +RE V+ +H NVV + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460
DE VV ++ G+L ++ R ++ + L + ++ +H++G
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
H +IKS ++LLT D +SD G ++ + T + APE+ + D
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 517 VYSFGVLLLEMLTGKAP 533
++S G++++EM+ G+ P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 118
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMAT 118
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 77 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 131
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 132 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMAT 118
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 118/291 (40%), Gaps = 44/291 (15%)
Query: 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI 386
+D E VLGKG+YG Y D + V ++E+ + Q + +
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 387 GKHSNVVPVRAYYYSKDEKLVVYSYM---PAGSLFMLLHRNRSDGGTALDWNSRMKIALG 443
KH + Y S E + +M P GSL LL RS G D + I
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL---RSKWGPLKD--NEQTIGFY 127
Query: 444 TAR---GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC--ISDVG----LAHLINFPTTA 494
T + G+ ++H + H +IK NVL+ +G ISD G LA + T
Sbjct: 128 TKQILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETF 183
Query: 495 TRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSV 552
T T+ Y APE+ + R + +D++S G ++EM TGK P G
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG-------------- 229
Query: 553 VREEWTAEVFDVELLK-YQDVEEEM-VQMLQIALSCVAKVPDSRPKMDDVV 601
E A +F V + K + ++ E M + L C PD R +D++
Sbjct: 230 ---EPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E++G G+YG YK ++ G +K + + E +Q++ ++ H N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 399 YYSK------DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ K D+ +V + AGS+ L+ + G L I RG++ +H
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLH 146
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYR----------A 502
K H +IK NVLLT++ + D G++ ++ RT+G R A
Sbjct: 147 QH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD------RTVGRRNTFIGTPYWMA 197
Query: 503 PEVT---ETRKASQ--KSDVYSFGVLLLEMLTGKAPL 534
PEV E A+ KSD++S G+ +EM G PL
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 45/286 (15%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLRE--VAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ V +K L+ +R+F + ++G H NV+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVI 71
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL-GTARGIAF-I 451
+ +++ +M GSL L +N DG + I L G RGIA +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTV-------IQLVGMLRGIAAGM 122
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---TATRTIG------YRA 502
+ H + + N+L+ +L +SD GL+ + T T T +G + A
Sbjct: 123 KYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561
PE + RK + SDV+S+G+++ E+++ G+ P + DV++ A
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN--------------AIE 228
Query: 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
D L D + Q++ L C K + RPK +V ++++
Sbjct: 229 QDYRLPPPMDCPSALHQLM---LDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 58/307 (18%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLRE--VAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ V +K L+ +R+F + ++G H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNII 93
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIA--LGTARGIAFI 451
+ +++ YM GSL L +N + R + +G RGI
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN----------DGRFTVIQLVGMLRGIG-- 141
Query: 452 HSEGGAKF------THGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG----- 499
G K+ H ++ + N+L+ +L +SD G++ ++ + P A T G
Sbjct: 142 ---SGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 500 -YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEW 557
+ APE RK + SDV+S+G+++ E+++ G+ P + DV+ + E +
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-------KAIEEGY 251
Query: 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ-IQQPELRNRA 616
L D + + Q+ L C K RPK +V M+++ I+ P R
Sbjct: 252 -------RLPPPMDCP---IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR- 300
Query: 617 SSGTESN 623
+G+ES+
Sbjct: 301 -TGSESS 306
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMAT 120
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 121 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAATKREFEQQME 381
F D D++R LGKG +G+ Y A + V+ K E + + +++E
Sbjct: 11 FTIDDFDIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 382 VVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRN-RSDGGTALDWNSRMKI 440
+ + +H N++ + Y++ + ++ + P G L+ L ++ R D + + +
Sbjct: 67 IQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR---- 496
AL H K H +IK N+L+ I+D G + ++ P+ R
Sbjct: 126 AL---------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCG 174
Query: 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
T+ Y PE+ E + +K D++ GVL E L G P H +
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 328 NFDLEDLLRASAEV---LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVV 383
N+D ++ R + LG G YG Y+ + + + TV VK L+E EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIAL 442
I KH N+V + + ++ +M G+L L NR + + + +A
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMAT 118
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
+ + ++ + F H ++ + N L+ ++ ++D GL+ L+ T
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
I + APE K S KSDV++FGVLL E+ T G +P
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 39/217 (17%)
Query: 340 EVLGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRA 397
E+ +G +G +KA ++ D V + L++ K+ ++ + E+ T G KH N++ A
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQD----KQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 398 YYYSKD----EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
E ++ ++ GSL L G + WN +A +RG++++H
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLK------GNIITWNELCHVAETMSRGLSYLHE 130
Query: 454 E------GGAK--FTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-----PTTATRTIG- 499
+ G K H + KS NVLL DL ++D GLA + F P +G
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA--VRFEPGKPPGDTHGQVGT 188
Query: 500 --YRAPEVTE-----TRKASQKSDVYSFGVLLLEMLT 529
Y APEV E R A + D+Y+ G++L E+++
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
+VLG G++G+ YK I + DG V +K LRE + K E E G S V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+V MP G L + NR G+ N M+IA +G++++
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIA----KGMSYLED- 137
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------EVTET 508
+ H ++ + NVL+ + I+D GLA L++ T G + P E
Sbjct: 138 --VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILR 195
Query: 509 RKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
R+ + +SDV+S+GV + E++T G P ++ DL
Sbjct: 196 RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V M GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 80
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V M GSL L ++ + T + ++ G A G+ ++
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 136
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G + H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 137 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 239
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 240 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 33/276 (11%)
Query: 342 LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
LG G YG Y+ + + + TV VK L+E EF ++ V+ I KH N+V +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 77
Query: 401 SKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+ ++ +M G+L L NR + + + +A + + ++ + F
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQISSAMEYLEKKN---F 130
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H ++ + N L+ ++ ++D GL+ L+ T I + APE K S K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573
SDV++FGVLL E+ T G +P + G D P V ++ + D + + +
Sbjct: 191 SDVWAFGVLLWEIATYGMSP--YPGID-----PSQVYELLEK-------DYRMERPEGCP 236
Query: 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
E++ ++++ +C P RP ++ + E + Q
Sbjct: 237 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 341 VLGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG---KHSNVVPVR 396
+LGKGS+ Y+A + G V +K + + A K Q+++ I KH +++ +
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y+ + +V G + L +NR N G+ ++HS G
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL-KNRVK---PFSENEARHFMHQIITGMLYLHSHG- 132
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI----GYRAPEVTETRKAS 512
H ++ SN+LLT+++N I+D GLA + P T+ Y +PE+
Sbjct: 133 --ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHG 190
Query: 513 QKSDVYSFGVLLLEMLTGKAPL 534
+SDV+S G + +L G+ P
Sbjct: 191 LESDVWSLGCMFYTLLIGRPPF 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 342 LGKGSYGSTYKAILED-----GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E + + +++E+ + +H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMY 80
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRN-RSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
Y++ + ++ + P G L+ L ++ R D + + + A + + H
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCHER- 133
Query: 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKA 511
K H +IK N+L+ I+D G + ++ P+ R T+ Y PE+ E +
Sbjct: 134 --KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 512 SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++ GVL E L G P H +
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 342 LGKGSYGSTYKAILED-----GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG +G+ Y A + V+ K E + + +++E+ + +H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMY 81
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRN-RSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
Y++ + ++ + P G L+ L ++ R D + + + A + + H
Sbjct: 82 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCHER- 134
Query: 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKA 511
K H +IK N+L+ I+D G + ++ P+ R T+ Y PE+ E +
Sbjct: 135 --KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 512 SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+K D++ GVL E L G P H +
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVV 393
+V+G G +G L+ +V +K L+ +R+F + ++G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ ++V M GSL L ++ + T + ++ G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-TVIQLVGMLR---GIASGMKYLSD 165
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATRTIG------YRAPEVT 506
G H ++ + N+L+ +L +SD GL+ ++ + P A T G + +PE
Sbjct: 166 MGAV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565
RK + SDV+S+G++L E+++ G+ P + DV+ V E +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAVDEGY-------R 268
Query: 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
L D + Q++ L C K ++RPK + +V +++++
Sbjct: 269 LPPPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 330 DLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKH 389
D E+L E +GKGS+G +K I VV ++ ++ + E E + + T+
Sbjct: 20 DPEELF-TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEI-TVLSQ 77
Query: 390 SNVVPVRAYY--YSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446
+ V YY Y K KL ++ Y+ GS LL D + +K L +
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFD---EFQIATMLKEIL---K 131
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIG---YRA 502
G+ ++HSE K H +IK++NVLL++ + ++D G+A L + +G + A
Sbjct: 132 GLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 188
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
PEV + K+D++S G+ +E+ G+ P
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 33/276 (11%)
Query: 342 LGKGSYGSTYKAILEDGT-TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
LG G +G Y+ + + + TV VK L+E EF ++ V+ I KH N+V +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 77
Query: 401 SKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459
+ ++ +M G+L L NR + + + +A + + ++ + F
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQISSAMEYLEKKN---F 130
Query: 460 THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-----IGYRAPEVTETRKASQK 514
H ++ + N L+ ++ ++D GL+ L+ T I + APE K S K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 515 SDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573
SDV++FGVLL E+ T G +P + G D P V ++ + D + + +
Sbjct: 191 SDVWAFGVLLWEIATYGMSP--YPGID-----PSQVYELLEK-------DYRMERPEGCP 236
Query: 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
E++ ++++ +C P RP ++ + E + Q
Sbjct: 237 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 339 AEVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPV 395
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
+ + + + Y G LF +R + + + G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETR 509
G TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 510 K-ASQKSDVYSFGVLLLEMLTGKAP 533
+ ++ DV+S G++L ML G+ P
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 339 AEVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPV 395
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 70
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
+ + + + Y G LF +R + + + G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETR 509
G TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 510 K-ASQKSDVYSFGVLLLEMLTGKAP 533
+ ++ DV+S G++L ML G+ P
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINAMLNHENVVKFY 71
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 123
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 71
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 123
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 339 AEVLGKGSYGSTYKAIL--EDGTT--VVVKRLREVAATKREFEQQMEVVGTIG--KHSNV 392
++LG+G +GS + L EDGT+ V VK ++ +++RE E+ + + H NV
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 393 VPVRAYYYSKDEK-----LVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTAR 446
+ + + +V+ +M G L LL+ G + + +K + A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI------NFPTTATRTIGY 500
G+ ++ + F H ++ + N +L D+ C++D GL+ I A + +
Sbjct: 159 GMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 501 RAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
A E R + KSDV++FGV + E+ T G P
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 340 EVLGKGSYGSTY---------------KAILEDGTTVVVKRLREVAATKREFEQQMEVVG 384
+VLG+GS+G + +L+ T V R+R TK E + +EV
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR----TKMERDILVEV-- 83
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
H +V + + ++ + ++ ++ G LF L + + +K L
Sbjct: 84 ---NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE------VMFTEEDVKFYLAE 134
Query: 445 -ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATR---TIG 499
A + +HS G + ++K N+LL ++ + ++D GL+ I+ A T+
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
Y APEV R +Q +D +SFGVL+ EMLTG P Q
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 341 VLGKGSYGSTYKAILE----DGTTVVVKRLR--EVAATKREFEQQMEVVGTIGKHSNVVP 394
V+G G +G L+ V +K L+ +R+F + ++G H NVV
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF-DHPNVVH 108
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ ++V +M G+L L ++ DG + + + G A G+ ++
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKH--DGQFTV--IQLVGMLRGIAAGMRYLADM 164
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN------FPTTATRT-IGYRAPEVTE 507
G + H ++ + N+L+ +L +SD GL+ +I + TT + + + APE +
Sbjct: 165 G---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 508 TRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566
RK + SDV+S+G+++ E+++ G+ P + DV+ + E + L
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-------KAIEEGY-------RL 267
Query: 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
D + Q++ L C K RPK + +V +++++
Sbjct: 268 PAPMDCPAGLHQLM---LDCWQKERAERPKFEQIVGILDKM 305
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 340 EVLGKGSYGSTY---------------KAILEDGTTVVVKRLREVAATKREFEQQMEVVG 384
+VLG+GS+G + +L+ T V R+R TK E + +EV
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR----TKMERDILVEV-- 84
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
H +V + + ++ + ++ ++ G LF L + + +K L
Sbjct: 85 ---NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE------VMFTEEDVKFYLAE 135
Query: 445 -ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATR---TIG 499
A + +HS G + ++K N+LL ++ + ++D GL+ I+ A T+
Sbjct: 136 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 192
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
Y APEV R +Q +D +SFGVL+ EMLTG P Q
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 339 AEVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPV 395
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
+ + + + Y G LF +R + + + G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETR 509
G TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 510 K-ASQKSDVYSFGVLLLEMLTGKAP 533
+ ++ DV+S G++L ML G+ P
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 339 AEVLGKGSYGSTYKAIL-----EDGT-TVVVKRLREVAAT--KREFEQQMEVVGTIGKHS 390
+ LG G++G +A ED V VK L+ A K +++++ +G+H
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS-----DGGTALDWNSRMKIALGTA 445
N+V + LV+ Y G L L R + G L+ + + A
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NF--PTTATRTIG 499
+G+AF+ S+ H ++ + NVLLT I D GLA I N+ A +
Sbjct: 163 QGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLT 529
+ APE + +SDV+S+G+LL E+ +
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 340 EVLGKGSYGSTY---------------KAILEDGTTVVVKRLREVAATKREFEQQMEVVG 384
+VLG+GS+G + +L+ T V R+R TK E + +EV
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR----TKMERDILVEV-- 83
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
H +V + + ++ + ++ ++ G LF L + + +K L
Sbjct: 84 ---NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE------VMFTEEDVKFYLAE 134
Query: 445 -ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATR---TIG 499
A + +HS G + ++K N+LL ++ + ++D GL+ I+ A T+
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
Y APEV R +Q +D +SFGVL+ EMLTG P Q
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 69
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 70 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 121
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 71
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 123
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 71
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 123
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 71
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 123
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 342 LGKGSYGSTYKAILE---DGT--TVVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
LG+G +G + DGT V VK L+ + ++Q+++++ T+ H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL-YHEHIIK 80
Query: 395 VRAYYYSKDEK--LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + EK +V Y+P GSL L R+ S G L + A G+A++H
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQL-----LLFAQQICEGMAYLH 134
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IGYRAPEV 505
S+ + H N+ + NVLL D I D GLA + R + + APE
Sbjct: 135 SQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
+ K SDV+SFGV L E+LT
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG +G ++ G V VK + +R + ++ E+ T+ +H N++
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 100
Query: 399 YYSKDEK--------LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ + D K +V Y GSLF L+R + +K+AL TA G+A
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAH 154
Query: 451 IHSE-----GGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-------HLINF-PTTATRT 497
+H E G H ++KS N+L+ ++ CI+D+GLA I+ P T
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 498 IGYRAPEVTETR------KASQKSDVYSFGVLLLEM 527
Y APEV + ++ +++D+Y+ G++ E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG +G ++ G V VK + +R + ++ E+ T+ +H N++
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 61
Query: 399 YYSKDEK--------LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ + D K +V Y GSLF L+R + +K+AL TA G+A
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAH 115
Query: 451 IHSE-----GGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-------HLINF-PTTATRT 497
+H E G H ++KS N+L+ ++ CI+D+GLA I+ P T
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 498 IGYRAPEVTETR------KASQKSDVYSFGVLLLEM 527
Y APEV + ++ +++D+Y+ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG +G ++ G V VK + +R + ++ E+ T+ +H N++
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 62
Query: 399 YYSKDEK--------LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ + D K +V Y GSLF L+R + +K+AL TA G+A
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAH 116
Query: 451 IHSE-----GGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-------HLINF-PTTATRT 497
+H E G H ++KS N+L+ ++ CI+D+GLA I+ P T
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 498 IGYRAPEVTETR------KASQKSDVYSFGVLLLEM 527
Y APEV + ++ +++D+Y+ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 71
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 123
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-XINKMLNHENVVKFY 71
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 123
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 339 AEVLGKGSYGSTYKAIL-----EDGT-TVVVKRLREVAAT--KREFEQQMEVVGTIGKHS 390
+ LG G++G +A ED V VK L+ A K +++++ +G+H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS-----DGGTALDWNSRMKIALGTA 445
N+V + LV+ Y G L L R + G L+ + + A
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NF--PTTATRTIG 499
+G+AF+ S+ H ++ + NVLLT I D GLA I N+ A +
Sbjct: 171 QGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLT 529
+ APE + +SDV+S+G+LL E+ +
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-XINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG +G ++ G V VK + +R + ++ E+ T+ +H N++
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 64
Query: 399 YYSKDEK--------LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ + D K +V Y GSLF L+R + +K+AL TA G+A
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAH 118
Query: 451 IHSE-----GGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-------HLINF-PTTATRT 497
+H E G H ++KS N+L+ ++ CI+D+GLA I+ P T
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 498 IGYRAPEVTETR------KASQKSDVYSFGVLLLEM 527
Y APEV + ++ +++D+Y+ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG +G ++ G V VK + +R + ++ E+ T+ +H N++
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 87
Query: 399 YYSKDEK--------LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ + D K +V Y GSLF L+R + +K+AL TA G+A
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAH 141
Query: 451 IHSE-----GGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-------HLINF-PTTATRT 497
+H E G H ++KS N+L+ ++ CI+D+GLA I+ P T
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 498 IGYRAPEVTETR------KASQKSDVYSFGVLLLEM 527
Y APEV + ++ +++D+Y+ G++ E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAY 398
E +GKG +G ++ G V VK + +R + ++ E+ T+ +H N++
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 67
Query: 399 YYSKDEK--------LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
+ + D K +V Y GSLF L+R + +K+AL TA G+A
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAH 121
Query: 451 IHSE-----GGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-------HLINF-PTTATRT 497
+H E G H ++KS N+L+ ++ CI+D+GLA I+ P T
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 498 IGYRAPEVTETR------KASQKSDVYSFGVLLLEM 527
Y APEV + ++ +++D+Y+ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 39/213 (18%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRL--REVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
+GKG YG + G V VK E A+ RE E V + +H N++ A
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTV---LMRHENILGFIAAD 100
Query: 400 Y----SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE- 454
S + ++ Y GSL+ L T LD S +K+A + G+ +H+E
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLK------STTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 455 ----GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----------PTTATRTIGY 500
G H ++KS N+L+ ++ CI+D+GLA + F P T T Y
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VKFISDTNEVDIPPNTRVGTKRY 212
Query: 501 RAPEVTE---TRKASQK---SDVYSFGVLLLEM 527
PEV + R Q +D+YSFG++L E+
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 40/232 (17%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT-------------TVVVKRLREVAATKREFEQQ 379
+LLR VLGKG YG ++ G ++V+ ++ A TK E
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 380 MEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRN---RSDGGTALDWNS 436
EV KH +V + + + + ++ Y+ G LFM L R D TA + +
Sbjct: 76 EEV-----KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED--TACFYLA 128
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA----HLINFPT 492
+ +ALG +H +G + ++K N++L + ++D GL H
Sbjct: 129 EISMALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD 544
T TI Y APE+ ++ D +S G L+ +MLTG P +D
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 342 LGKGSYGST----------YKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN 391
LG GS+G Y A+ +VV RL++V T E ++ +I H
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDE-----RLMLSIVTHPF 67
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRN-RSDGGTALDWNSRMKIALGTARGIAF 450
++ + + + ++ Y+ G LF LL ++ R A + + + +AL +
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL------EY 121
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVTE 507
+HS+ + ++K N+LL ++ + I+D G A + P G Y APEV
Sbjct: 122 LHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV--PDVTYXLCGTPDYIAPEVVS 176
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537
T+ ++ D +SFG+L+ EML G P S
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+YG A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-XINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 337 ASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ +V+G GS+G ++A L + V +K++ + K Q M +V KH NVV ++
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIV----KHPNVVDLK 98
Query: 397 AYYYS----KDEKL--VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
A++YS KDE +V Y+P H + + L R +A+
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL--LRSLAY 156
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG----------- 499
IHS G H +IK N+LL G+ LI+F + G
Sbjct: 157 IHSIG---ICHRDIKPQNLLLD-------PPSGVLKLIDFGSAKILIAGEPNVSXICSRY 206
Query: 500 YRAPE-VTETRKASQKSDVYSFGVLLLEMLTGKAPL--QHSGHDDVVDLPRWVRSVVREE 556
YRAPE + + D++S G ++ E++ G+ PL SG D +V++ + + + RE+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ-PLFPGESGIDQLVEIIKVLGTPSREQ 265
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 39/284 (13%)
Query: 326 YFNFDLEDLLRASAEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAATKREFEQQM 380
+++ DL+D + LG+GS+ K + + ++ KR+ A T++E +
Sbjct: 9 HYDLDLKD------KPLGEGSFSICRKCVHKKSNQAFAVKIISKRME--ANTQKE----I 56
Query: 381 EVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKI 440
+ H N+V + ++ + +V + G LF + + + T + R +
Sbjct: 57 TALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLV 116
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLI---NFP-TT 493
+ ++ +H G H ++K N+L T + L I D G A L N P T
Sbjct: 117 S-----AVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168
Query: 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV 553
T+ Y APE+ + D++S GV+L ML+G+ P Q HD + V +
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ--SHDRSLTCTSAVE--I 224
Query: 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKM 597
++ F E +++V +E ++Q L+ P+ R KM
Sbjct: 225 MKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTV---DPNKRLKM 265
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 342 LGKGSYGSTYKAILE---DGT--TVVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
LG+G +G + DGT V VK L+ + ++Q+++++ T+ H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL-YHEHIIK 80
Query: 395 VRAYYYSKDEK--LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + EK +V Y+P GSL L R+ S G L + A G+A++H
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQL-----LLFAQQICEGMAYLH 134
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IGYRAPEV 505
++ + H N+ + NVLL D I D GLA + R + + APE
Sbjct: 135 AQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
+ K SDV+SFGV L E+LT
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 40/232 (17%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT-------------TVVVKRLREVAATKREFEQQ 379
+LLR VLGKG YG ++ G ++V+ ++ A TK E
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 380 MEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRN---RSDGGTALDWNS 436
EV KH +V + + + + ++ Y+ G LFM L R D TA + +
Sbjct: 76 EEV-----KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED--TACFYLA 128
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR 496
+ +ALG +H +G + ++K N++L + ++D GL T T
Sbjct: 129 EISMALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 497 ----TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD 544
TI Y APE+ ++ D +S G L+ +MLTG P +D
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 34/234 (14%)
Query: 331 LEDLLRASAEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKR-EFEQQMEVVGTIGK 388
ED+ + ++E+LG+G+Y A+ L++G VK + + A R +++E +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR--MKIALGTAR 446
+ N++ + ++ +V+ + GS+ + + + +N R ++ A
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-------FNEREASRVVRDVAA 122
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLL-----TQDLNGCISDVGLAHLINFP---------T 492
+ F+H++G A H ++K N+L + C D+G +N T
Sbjct: 123 ALDFLHTKGIA---HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 493 TATRTIGYRAPEVTE--TRKAS---QKSDVYSFGVLLLEMLTGKAP-LQHSGHD 540
T + Y APEV E T +A+ ++ D++S GV+L ML+G P + H G D
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD 233
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 132/328 (40%), Gaps = 51/328 (15%)
Query: 311 VQEAEKNKLCFLDGSYFNFDLE-DLLR---ASAEVLGKGSYG-----STYKAILEDGT-T 360
V+E N ++D + +D + + R + + LG G++G + Y I D T
Sbjct: 19 VEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT 78
Query: 361 VVVKRLREVAA-TKRE-FEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418
V VK L+ A T+RE +++V+ +G H N+V + LV+ Y G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 419 MLLHRNRSDGGTALDWNSRM-------------KIALGTARGIAFIHSEGGAKFTHGNIK 465
L R R + + M + A+G+AF+ S+ H ++
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLA 195
Query: 466 SSNVLLTQDLNGCISDVGLA-HLIN-----FPTTATRTIGYRAPEVTETRKASQKSDVYS 519
+ N+LLT I D GLA H+ N A + + APE + +SDV+S
Sbjct: 196 ARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 520 FGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQ 578
+G+ L E+ + G +P D +++E + E +
Sbjct: 256 YGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG----------FRMLSPEHAPAE 299
Query: 579 MLQIALSCVAKVPDSRPKMDDVVRMIEQ 606
M I +C P RP +V++IE+
Sbjct: 300 MYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 334 LLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNV 392
LL S +G+GS G A + G V VK + +RE V+ +H NV
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V + Y +E V+ ++ G+L ++ + R L+ + + +A++H
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR------LNEEQIATVCEAVLQALAYLH 158
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTET 508
++G H +IKS ++LLT D +SD G I+ + T + APEV
Sbjct: 159 AQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISR 215
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAP 533
+ + D++S G++++EM+ G+ P
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 28/263 (10%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVR 396
+G+G + Y+A L DG V +K+++ A + + ++++++ + H NV+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYY 98
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
A + +E +V AG L ++ ++ + + K + + +HS
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMI-KHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-- 155
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI----GYRAPEVTETRKAS 512
+ H +IK +NV +T + D+GL + TTA ++ Y +PE +
Sbjct: 156 -RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572
KSD++S G LL EM A LQ + D ++L + + E D L
Sbjct: 215 FKSDIWSLGCLLYEM----AALQSPFYGDKMNLYSLCKKI-------EQCDYPPLPSDHY 263
Query: 573 EEEMVQMLQIALSCVAKVPDSRP 595
EE+ Q++ + C+ P+ RP
Sbjct: 264 SEELRQLVNM---CINPDPEKRP 283
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 340 EVLGKGSYGSTY---KAILED-GTTVVVKRLREVAATKRE---FEQQMEVVGTIGKHSNV 392
+VLG+GS+G + K D G +K L++ R+ + + +++ + H V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN-HPFV 92
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT-ARGIAFI 451
V + + ++ + ++ ++ G LF L + + +K L A G+ +
Sbjct: 93 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE------VMFTEEDVKFYLAELALGLDHL 146
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATR---TIGYRAPEVTE 507
HS G + ++K N+LL ++ + ++D GL+ I+ A T+ Y APEV
Sbjct: 147 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ S +D +S+GVL+ EMLTG P Q
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 21/226 (9%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVV 383
GS+ N D E +G GSY + + + T + ++ + +KR+ +++E++
Sbjct: 18 GSHMNLVFSDGY-VVKETIGVGSYSECKRCVHK--ATNMEYAVKVIDKSKRDPSEEIEIL 74
Query: 384 GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALG 443
G+H N++ ++ Y +V M G L + R + L
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK------FFSEREASFVLH 128
Query: 444 T-ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG--C--ISDVGLAHLIN----FPTTA 494
T + + ++HS+G H ++K SN+L + C I D G A + T
Sbjct: 129 TIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540
T + APEV + + + D++S G+LL ML G P + D
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 130/328 (39%), Gaps = 51/328 (15%)
Query: 311 VQEAEKNKLCFLDGSYFNFDLE-DLLR---ASAEVLGKGSYG-----STYKAILEDGT-T 360
V+E N ++D + +D + + R + + LG G++G + Y I D T
Sbjct: 19 VEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT 78
Query: 361 VVVKRLREVAA-TKRE-FEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418
V VK L+ A T+RE +++V+ +G H N+V + LV+ Y G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 419 MLLHRNRSDGGTALDWNSRM-------------KIALGTARGIAFIHSEGGAKFTHGNIK 465
L R R + + M + A+G+AF+ S+ H ++
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLA 195
Query: 466 SSNVLLTQDLNGCISDVGLAHLIN------FPTTATRTIGYRAPEVTETRKASQKSDVYS 519
+ N+LLT I D GLA I A + + APE + +SDV+S
Sbjct: 196 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 520 FGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQ 578
+G+ L E+ + G +P D +++E + E +
Sbjct: 256 YGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG----------FRMLSPEHAPAE 299
Query: 579 MLQIALSCVAKVPDSRPKMDDVVRMIEQ 606
M I +C P RP +V++IE+
Sbjct: 300 MYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 130/328 (39%), Gaps = 51/328 (15%)
Query: 311 VQEAEKNKLCFLDGSYFNFDLE-DLLR---ASAEVLGKGSYG-----STYKAILEDGT-T 360
V+E N ++D + +D + + R + + LG G++G + Y I D T
Sbjct: 14 VEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT 73
Query: 361 VVVKRLREVAA-TKRE-FEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418
V VK L+ A T+RE +++V+ +G H N+V + LV+ Y G L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 419 MLLHRNRSDGGTALDWNSRM-------------KIALGTARGIAFIHSEGGAKFTHGNIK 465
L R R + + M + A+G+AF+ S+ H ++
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLA 190
Query: 466 SSNVLLTQDLNGCISDVGLAHLIN------FPTTATRTIGYRAPEVTETRKASQKSDVYS 519
+ N+LLT I D GLA I A + + APE + +SDV+S
Sbjct: 191 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 520 FGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQ 578
+G+ L E+ + G +P D +++E + E +
Sbjct: 251 YGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG----------FRMLSPEHAPAE 294
Query: 579 MLQIALSCVAKVPDSRPKMDDVVRMIEQ 606
M I +C P RP +V++IE+
Sbjct: 295 MYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVK--RLREVAATK-REFEQQMEVVGTIGKHSNVVPVRAY 398
L + G +K + G +VVK ++R+ + K R+F ++ + I H NV+PV
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRL-RIFSHPNVLPVLGA 75
Query: 399 YYSKD--EKLVVYSYMPAGSLFMLLHRNRSDGGT--ALDWNSRMKIALGTARGIAFIHSE 454
S ++ + P GSL+ +LH GT +D + +K AL ARG AF+H+
Sbjct: 76 CQSPPAPHPTLITHWXPYGSLYNVLHE-----GTNFVVDQSQAVKFALDXARGXAFLHTL 130
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAPEVTETRKAS-- 512
H + S +V + +D IS + P + APE + +
Sbjct: 131 EPLIPRHA-LNSRSVXIDEDXTARISXADVKFSFQSPGRXY-APAWVAPEALQKKPEDTN 188
Query: 513 -QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571
+ +D +SF VLL E++T + P + ++ +E L+
Sbjct: 189 RRSADXWSFAVLLWELVTREVPFADLSNXEI----------------GXKVALEGLRPTI 232
Query: 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608
+ ++ C + P RPK D +V ++E+ Q
Sbjct: 233 PPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV---VVKRLREVAATKREFEQQMEVVGTIGK--HSNVV 393
+VLG G +G+ +K + + +G ++ V ++ E + ++ F+ + + IG H+++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ +LV Y+P GSL + ++R G L N ++IA +G+ ++
Sbjct: 97 RLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA----KGMYYLEE 151
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN------FPTTATRTIGYRAPEVTE 507
G H N+ + NVLL ++D G+A L+ + A I + A E
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 508 TRKASQKSDVYSFGVLLLEMLT 529
K + +SDV+S+GV + E++T
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMT 230
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 342 LGKGSYGSTYKAILE---DGT--TVVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
LG+G +G + DGT V VK L+E + +++++E++ T+ H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-YHEHIVK 75
Query: 395 VRAYYYSKDEKLV--VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + EK V V Y+P GSL L R+ + + A G+A++H
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH------CVGLAQLLLFAQQICEGMAYLH 129
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IGYRAPEV 505
++ + H + + NVLL D I D GLA + R + + APE
Sbjct: 130 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
+ K SDV+SFGV L E+LT
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 115/296 (38%), Gaps = 49/296 (16%)
Query: 332 EDLLRASAEVLGKGSYGSTYKAILEDGTT----VVVKRLREVAATKREFEQQMEVVGTIG 387
E ++ S V+GKG +G Y D +K L + QQ+E G
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM-----QQVEAFLREG 73
Query: 388 ------KHSNVVPVRAYYYSKDE-KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKI 440
H NV+ + + V+ YM G L + R+ T D S
Sbjct: 74 LLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLIS---F 129
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--------HLINFPT 492
L ARG+ ++ + KF H ++ + N +L + ++D GLA + +
Sbjct: 130 GLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186
Query: 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRS 551
A + + A E +T + + KSDV+SFGVLL E+LT G P +H D+ R
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR 246
Query: 552 VVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ + E+ + + Q+ C P RP +V +EQI
Sbjct: 247 LPQPEYCPD-----------------SLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 119/304 (39%), Gaps = 47/304 (15%)
Query: 339 AEVLGKGSYGSTYKAIL-----EDGT-TVVVKRLREVAAT--KREFEQQMEVVGTIGKHS 390
+ LG G++G +A ED V VK L+ A K +++++ +G+H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMK 439
N+V + LV+ Y G L L R R G L +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NF--PTT 493
+ A+G+AF+ S+ H ++ + NVLLT I D GLA I N+
Sbjct: 171 FSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV 553
A + + APE + +SDV+S+G+LL E+ + + L + +V
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LGLNPYPGILV 274
Query: 554 REEWTAEVFDVELLKYQDVEEEMV--QMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611
++ V D YQ + + I +C A P RP + +++ Q +
Sbjct: 275 NSKFYKLVKD----GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 330
Query: 612 LRNR 615
R R
Sbjct: 331 RRER 334
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 342 LGKGSYGSTYKAILE---DGT--TVVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
LG+G +G + DGT V VK L+E + +++++E++ T+ H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-YHEHIVK 74
Query: 395 VRAYYYSKDEKLV--VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + EK V V Y+P GSL L R+ + + A G+A++H
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH------CVGLAQLLLFAQQICEGMAYLH 128
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IGYRAPEV 505
++ + H + + NVLL D I D GLA + R + + APE
Sbjct: 129 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
+ K SDV+SFGV L E+LT
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 309 SGVQEAEKNKLCFLDGSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLRE 368
S VQ+ +N + F DG D+ G GSY + I + ++
Sbjct: 8 SIVQQLHRNSIQFTDGYEVKEDI-----------GVGSYSVCKRCIHKATNXEFAVKI-- 54
Query: 369 VAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG 428
+ +KR+ +++E++ G+H N++ ++ Y VV G L + R +
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--- 111
Query: 429 GTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC----ISDVGL 484
+ + + ++H++G H ++K SN+L + I D G
Sbjct: 112 --FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 485 AHLIN----FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540
A + T T + APEV E + D++S GVLL LTG P +G D
Sbjct: 167 AKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFA-NGPD 225
Query: 541 D 541
D
Sbjct: 226 D 226
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV---VVKRLREVAATKREFEQQMEVVGTIGK--HSNVV 393
+VLG G +G+ +K + + +G ++ V ++ E + ++ F+ + + IG H+++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ +LV Y+P GSL + ++R G L N ++IA +G+ ++
Sbjct: 79 RLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA----KGMYYLEE 133
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN------FPTTATRTIGYRAPEVTE 507
G H N+ + NVLL ++D G+A L+ + A I + A E
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 508 TRKASQKSDVYSFGVLLLEMLT 529
K + +SDV+S+GV + E++T
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMT 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGT---IGKHSNVVP 394
+ LG+GS+G A G V +K + + K + + ++E + + +H +++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ SKDE ++V Y ++ R++ A + ++ + + H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI------ISAVEYCHRH 126
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---NFPTTATRTIGYRAPEVTETR-K 510
K H ++K N+LL + LN I+D GL++++ NF T+ + Y APEV +
Sbjct: 127 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPL 534
A + DV+S GV+L ML + P
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGT---IGKHSNVVP 394
+ LG+GS+G A G V +K + + K + + ++E + + +H +++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ SKDE ++V Y ++ R++ A + ++ + + H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI------ISAVEYCHRH 131
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---NFPTTATRTIGYRAPEVTETR-K 510
K H ++K N+LL + LN I+D GL++++ NF T+ + Y APEV +
Sbjct: 132 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPL 534
A + DV+S GV+L ML + P
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGT---IGKHSNVVP 394
+ LG+GS+G A G V +K + + K + + ++E + + +H +++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ SKDE ++V Y ++ R++ A + ++ + + H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI------ISAVEYCHRH 122
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---NFPTTATRTIGYRAPEVTETR-K 510
K H ++K N+LL + LN I+D GL++++ NF T+ + Y APEV +
Sbjct: 123 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPL 534
A + DV+S GV+L ML + P
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
E +G GSY + + + T + ++ + +KR+ +++E++ G+H N++ ++ Y
Sbjct: 33 ETIGVGSYSECKRCVHK--ATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT-ARGIAFIHSEGGAK 458
+V M G L + R + L T + + ++HS+G
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQK------FFSEREASFVLHTIGKTVEYLHSQG--- 141
Query: 459 FTHGNIKSSNVLLTQDLNG--C--ISDVGLAHLIN----FPTTATRTIGYRAPEVTETRK 510
H ++K SN+L + C I D G A + T T + APEV + +
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540
+ D++S G+LL ML G P + D
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 116/295 (39%), Gaps = 47/295 (15%)
Query: 340 EVLGKGSYG-----STYKAILEDGT-TVVVKRLREVAA-TKRE-FEQQMEVVGTIGKHSN 391
+ LG G++G + Y I D TV VK L+ A T+RE +++V+ +G H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM------------- 438
+V + LV+ Y G L L R R + + M
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN------FPT 492
+ A+G+AF+ S+ H ++ + N+LLT I D GLA I
Sbjct: 149 SFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRS 551
A + + APE + +SDV+S+G+ L E+ + G +P D
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK------FYK 259
Query: 552 VVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606
+++E + E +M I +C P RP +V++IE+
Sbjct: 260 MIKEG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGT---IGKHSNVVP 394
+ LG+GS+G A G V +K + + K + + ++E + + +H +++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ SKDE ++V Y ++ R++ A + ++ + + H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI------ISAVEYCHRH 132
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---NFPTTATRTIGYRAPEVTETR-K 510
K H ++K N+LL + LN I+D GL++++ NF T+ + Y APEV +
Sbjct: 133 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPL 534
A + DV+S GV+L ML + P
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSL-FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
VV + Y +KD +V + M G L F + H G + A G+
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM----GQAGFPEARAVFYAAEICCGLED 301
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATR--TIGYRAPEVTE 507
+H E + + ++K N+LL + ISD+GLA H+ T R T+GY APEV +
Sbjct: 302 LHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVK 358
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQH 536
+ + D ++ G LL EM+ G++P Q
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSL-FMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
VV + Y +KD +V + M G L F + H G + A G+
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM----GQAGFPEARAVFYAAEICCGLED 301
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATR--TIGYRAPEVTE 507
+H E + + ++K N+LL + ISD+GLA H+ T R T+GY APEV +
Sbjct: 302 LHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVK 358
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQH 536
+ + D ++ G LL EM+ G++P Q
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 116/295 (39%), Gaps = 47/295 (15%)
Query: 340 EVLGKGSYG-----STYKAILEDGT-TVVVKRLREVAA-TKRE-FEQQMEVVGTIGKHSN 391
+ LG G++G + Y I D TV VK L+ A T+RE +++V+ +G H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM------------- 438
+V + LV+ Y G L L R R + + M
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN------FPT 492
+ A+G+AF+ S+ H ++ + N+LLT I D GLA I
Sbjct: 165 SFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRS 551
A + + APE + +SDV+S+G+ L E+ + G +P D
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK------FYK 275
Query: 552 VVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606
+++E + E +M I +C P RP +V++IE+
Sbjct: 276 MIKEG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 22/234 (9%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTYKAIL----EDGTTVVVKRLRE--VAATKREFE 377
G F ++E +++G G G L + V +K L+ +R+F
Sbjct: 39 GRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL 98
Query: 378 QQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR 437
+ ++G H N++ + ++V YM GSL L + DG +
Sbjct: 99 SEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTI--MQL 153
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATR 496
+ + G G+ ++ G + H ++ + NVL+ +L +SD GL+ ++ + P A
Sbjct: 154 VGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 497 TIG------YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
T G + APE R S SDV+SFGV++ E+L G+ P + + DV+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQM----EVVGTIGKHSNVVP 394
+V+GKGS+G A + + VK L++ A K++ E+ + V+ KH +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ + + D+ V Y+ G LF L R R L+ +R A A + ++HS
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLEPRARF-YAAEIASALGYLHS- 157
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--HLINFPTTATR--TIGYRAPEVTETRK 510
+ ++K N+LL + ++D GL ++ + TT+T T Y APEV +
Sbjct: 158 --LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPL 534
+ D + G +L EML G P
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 340 EVLGKGSYGSTYKAI---LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+ LG+G+ G A+ E+ V + ++ ++++ + + H NVV
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFY 70
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ + + + Y G LF +R + + + G+ ++H G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK 510
TH +IK N+LL + N ISD GLA + + T+ Y APE+ + R+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 511 -ASQKSDVYSFGVLLLEMLTGKAP 533
++ DV+S G++L ML G+ P
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 46/341 (13%)
Query: 307 FGSGVQEAEKNKLCFLDGSYFNFDLEDLLRAS---AEVLGKGSYGSTYKAIL------ED 357
G+GV A N F + D ++ R + LG+GS+G Y+ + E
Sbjct: 17 LGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEP 76
Query: 358 GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415
T V +K + E A+ + EF + V+ H +VV + LV+ M G
Sbjct: 77 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 416 SLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVL 470
L L R + L + +++A A G+A++++ KF H ++ + N +
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 192
Query: 471 LTQDLNGCISDVGLAHLINFPTTATRTIG-------YRAPEVTETRKASQKSDVYSFGVL 523
+ +D I D G+ I + T R G + +PE + + SDV+SFGV+
Sbjct: 193 VAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 251
Query: 524 LLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQI 582
L E+ T + P Q ++ V+ V + LL D +M + ++
Sbjct: 252 LWEIATLAEQPYQGLSNEQVLRF---------------VMEGGLLDKPDNCPDM--LFEL 294
Query: 583 ALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGTESN 623
C P RP +++ I++ +P R + +E N
Sbjct: 295 MRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEEN 335
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 76
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I T R G +
Sbjct: 137 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-ETDXXRKGGKGLLPVRWM 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 237
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M +L++ C P RP +++ I++ +P R + +
Sbjct: 238 VMEGGLLDKPDNCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 295
Query: 621 ESN 623
E N
Sbjct: 296 EEN 298
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 94
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 95 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 146
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 94
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 95 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 146
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 326 YFNFDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVG 384
+++F EDL + E+ G+G+YGS K + + G + VKR+R K + + M++
Sbjct: 16 HWDFTAEDL-KDLGEI-GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL-D 72
Query: 385 TIGKHSNVVPVRAYY---YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIA 441
+ + S+ + +Y + + + + M + S S + KI
Sbjct: 73 VVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-- 499
L T + A H + K H +IK SN+LL + N + D G++ + TR G
Sbjct: 132 LATVK--ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCR 189
Query: 500 -YRAPEVTETRKASQ----KSDVYSFGVLLLEMLTGKAP 533
Y APE + + Q +SDV+S G+ L E+ TG+ P
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 94
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 95 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 146
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 84
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I + T R G +
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 200
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 245
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 246 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 303
Query: 621 ESN 623
E N
Sbjct: 304 EEN 306
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 22/234 (9%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTYKAIL----EDGTTVVVKRLRE--VAATKREFE 377
G F ++E +++G G G L + V +K L+ +R+F
Sbjct: 39 GRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL 98
Query: 378 QQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR 437
+ ++G H N++ + ++V YM GSL L + DG +
Sbjct: 99 SEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTI--MQL 153
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-NFPTTATR 496
+ + G G+ ++ G + H ++ + NVL+ +L +SD GL+ ++ + P A
Sbjct: 154 VGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 497 TIG------YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
T G + APE R S SDV+SFGV++ E+L G+ P + + DV+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVV-KRLREVAATKREFEQQMEVVGTIGK---HSNVVPVRA 397
LGKG + Y+ D V K + + K +++M I K + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 398 YYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGA 457
++ D VV SL L R ++ + R T +G+ ++H+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ-----TIQGVQYLHNN--- 161
Query: 458 KFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI----GYRAPEVTETRKASQ 513
+ H ++K N+ L D++ I D GLA I F +T+ Y APEV + S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 514 KSDVYSFGVLLLEMLTGKAPLQHS 537
+ D++S G +L +L GK P + S
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKXQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 108/275 (39%), Gaps = 66/275 (24%)
Query: 315 EKNKLCFLDGSYFNFDLEDLLRASAEVLGKGSYGSTYKA--ILEDGTTVVVKR------- 365
EK+ LC D Y AE+ G+G+YG +KA + G V +KR
Sbjct: 2 EKDGLCRADQQY---------ECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGE 51
Query: 366 -------LREVAATK--REFEQQMEV----VGTIGKHSNVVPVRAYYYSKDEKLVVY-SY 411
+REVA + FE V V T+ + + + D+ L Y
Sbjct: 52 EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK 111
Query: 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471
+P + G + M L RG+ F+HS + H ++K N+L+
Sbjct: 112 VP-------------EPGVPTETIKDMMFQL--LRGLDFLHSH---RVVHRDLKPQNILV 153
Query: 472 TQDLNGCISDVGLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEML 528
T ++D GLA + +F T+ T+ YRAPEV + D++S G + EM
Sbjct: 154 TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Query: 529 TGKAPLQHSGHD--------DVVDLP---RWVRSV 552
K PL D DV+ LP W R V
Sbjct: 214 RRK-PLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 78
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I + T R G +
Sbjct: 139 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 194
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 239
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 240 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 297
Query: 621 ESN 623
E N
Sbjct: 298 EEN 300
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKXQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 91
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I + T R G +
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 207
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 252
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 253 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 310
Query: 621 ESN 623
E N
Sbjct: 311 EEN 313
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 82
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I + T R G +
Sbjct: 143 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 198
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 243
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 244 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 301
Query: 621 ESN 623
E N
Sbjct: 302 EEN 304
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 85
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I + T R G +
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 201
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 246
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 247 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 304
Query: 621 ESN 623
E N
Sbjct: 305 EEN 307
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 35/223 (15%)
Query: 339 AEVLGKGSYGSTYKAIL-----EDGT-TVVVKRLREVAAT--KREFEQQMEVVGTIGKHS 390
+ LG G++G +A ED V VK L+ A K +++++ +G+H
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS------------------DGGTAL 432
N+V + LV+ Y G L L R + G L
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 433 DWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---- 488
+ + + A+G+AF+ S+ H ++ + NVLLT I D GLA I
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 489 NF--PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT 529
N+ A + + APE + +SDV+S+G+LL E+ +
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG-----KHSNVVP 394
+G GSYG K + DG +V K L + T E E+QM +V + KH N+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQM-LVSEVNLLRELKHPNIV- 68
Query: 395 VRAYYYSKDEK----LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
R Y D +V Y G L ++ + + LD +++ +
Sbjct: 69 -RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKE 126
Query: 451 IH--SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-IG---YRAPE 504
H S+GG H ++K +NV L N + D GLA ++N T+ +T +G Y +PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE 186
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
++KSD++S G LL E+ P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 92
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 93 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 144
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 145 YIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 78
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N + +D I D G+ I + T R G +
Sbjct: 139 AYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 194
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 239
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M +L++ C P RP +++ I++ +P R + +
Sbjct: 240 VMEGGLLDKPDNCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 297
Query: 621 ESN 623
E N
Sbjct: 298 EEN 300
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 92
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 93 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 144
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 145 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 86
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 87 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 138
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 139 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 195
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 233
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 94
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 95 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 146
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 203
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 107
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 108 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 159
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 216
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 93
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 94 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 145
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 98
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 99 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 150
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 151 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 207
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 84
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 85 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 136
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 137 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 193
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 89
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 90 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 141
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 142 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 89
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 90 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 141
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 142 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 84
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I + T R G +
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 200
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 245
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 246 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 303
Query: 621 ESN 623
E N
Sbjct: 304 EEN 306
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 99
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 100 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 151
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 152 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G V +K ++E + ++ EF ++ +V+ + H +V +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 75
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ ++ YM G L L R T +++ + ++ S+ +F H
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 462 GNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
++ + N L+ +SD GL+ ++++ T++R + + PEV K S KSD
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 517 VYSFGVLLLEMLT-GKAPLQ 535
+++FGVL+ E+ + GK P +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYE 208
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 99
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 100 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 151
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 152 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 92
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 93 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 144
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 145 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 83
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 84 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 135
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 99
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 100 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 151
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 152 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 110
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 111 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 162
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 163 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 219
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 106
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 107 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 158
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 159 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 215
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 84
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 85 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 136
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 137 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 193
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 97
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 98 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 149
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 150 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 206
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 244
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 108/275 (39%), Gaps = 66/275 (24%)
Query: 315 EKNKLCFLDGSYFNFDLEDLLRASAEVLGKGSYGSTYKA--ILEDGTTVVVKR------- 365
EK+ LC D Y AE+ G+G+YG +KA + G V +KR
Sbjct: 2 EKDGLCRADQQY---------ECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGE 51
Query: 366 -------LREVAATK--REFEQQMEV----VGTIGKHSNVVPVRAYYYSKDEKLVVY-SY 411
+REVA + FE V V T+ + + + D+ L Y
Sbjct: 52 EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK 111
Query: 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471
+P + G + M L RG+ F+HS + H ++K N+L+
Sbjct: 112 VP-------------EPGVPTETIKDMMFQL--LRGLDFLHSH---RVVHRDLKPQNILV 153
Query: 472 TQDLNGCISDVGLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEML 528
T ++D GLA + +F T+ T+ YRAPEV + D++S G + EM
Sbjct: 154 TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Query: 529 TGKAPLQHSGHD--------DVVDLP---RWVRSV 552
K PL D DV+ LP W R V
Sbjct: 214 RRK-PLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 89
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 90 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 141
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 142 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 85
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 86 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 137
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 138 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 194
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 92
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 93 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 144
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 145 YIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 340 EVLGKGSYGSTYKAIL-----EDGT-TVVVKRLREVAAT--KREFEQQMEVVGTIGKHSN 391
+ LG G++G +A ED V VK L+ A K +++++ +G+H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNR---------SDGGTALDWNSRMKIAL 442
+V + LV+ Y G L L R + + L + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NF--PTTATR 496
A+G+AF+ S+ H ++ + NVLLT I D GLA I N+ A
Sbjct: 172 QVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556
+ + APE + +SDV+S+G+LL E+ + + L + +V +
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LGLNPYPGILVNSK 275
Query: 557 WTAEVFDVELLKYQDVEEEMV--QMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614
+ V D YQ + + I +C A P RP + +++ Q + R
Sbjct: 276 FYKLVKD----GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRE 331
Query: 615 R 615
R
Sbjct: 332 R 332
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 106
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 107 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 158
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 159 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 215
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 83
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M N L + + RG+
Sbjct: 84 DVFTPARSLEEFNDVYLVTH--------LMGADLNNIVKCAKLTDDHVQFLIYQILRGLK 135
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 109/275 (39%), Gaps = 66/275 (24%)
Query: 315 EKNKLCFLDGSYFNFDLEDLLRASAEVLGKGSYGSTYKA--ILEDGTTVVVKR------- 365
EK+ LC D Y AE+ G+G+YG +KA + G V +KR
Sbjct: 2 EKDGLCRADQQY---------ECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGE 51
Query: 366 -------LREVAATK--REFEQ----QMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY-SY 411
+REVA + FE ++ V T+ + + + D+ L Y
Sbjct: 52 EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK 111
Query: 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471
+P + G + M L RG+ F+HS + H ++K N+L+
Sbjct: 112 VP-------------EPGVPTETIKDMMFQL--LRGLDFLHSH---RVVHRDLKPQNILV 153
Query: 472 TQDLNGCISDVGLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEML 528
T ++D GLA + +F T+ T+ YRAPEV + D++S G + EM
Sbjct: 154 TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Query: 529 TGKAPLQHSGHD--------DVVDLP---RWVRSV 552
K PL D DV+ LP W R V
Sbjct: 214 RRK-PLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 107
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 108 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 159
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 216
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 98
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 99 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 150
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 151 YIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 207
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--------- 388
+ LG G++G E G V VK L R+ + ++VVG I +
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKIL------NRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
H +++ + + + +V Y+ G LF + +N LD ++ G+
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGV 129
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN---FPTTATRTIGYRAPEV 505
+ H H ++K NVLL +N I+D GL+++++ F + + Y APEV
Sbjct: 130 DYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEV 186
Query: 506 TETR-KASQKSDVYSFGVLLLEMLTGKAPL 534
R A + D++S GV+L +L G P
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 83
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 84 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 135
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 125/303 (41%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 85
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH--RNRSDGGTAL---DWNSRMKIALGTARGI 448
+ LV+ M G L L R + L + +++A A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I T R G +
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-ETDXXRKGGKGLLPVRWM 201
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 246
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 247 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 304
Query: 621 ESN 623
E N
Sbjct: 305 EEN 307
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 42/291 (14%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-------GGTALDWNSRMKIALGTA 445
+ A +V+ + G+L L R++ L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT------IG 499
+G+ F+ S K H ++ + N+LL++ I D GLA I R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558
+ APE R + +SDV+SFGVLL E+ + G +P D EE+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFC 257
Query: 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
+ + ++ D +M Q L C P RP ++V + + Q
Sbjct: 258 RRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 330 DLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKH 389
D E+L + +GKGS+G YK I VV ++ ++ + E E + + + +
Sbjct: 16 DPEELF-TKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 390 SNVVPVRAY-YYSKDEKL-VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARG 447
+ R + Y K KL ++ Y+ GS LL L+ I +G
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG------PLEETYIATILREILKG 128
Query: 448 IAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIG---YRAP 503
+ ++HSE + H +IK++NVLL++ + ++D G+A L + +G + AP
Sbjct: 129 LDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAP 533
EV + K+D++S G+ +E+ G+ P
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 44/293 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD---------GGTALDWNSRMKIALG 443
+ A +V+ + G+L L R++ L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT------ 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREE 556
+ + APE R + +SDV+SFGVLL E+ + G +P D EE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 259
Query: 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 260 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 42/291 (14%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-------GGTALDWNSRMKIALGTA 445
+ A +V+ + G+L L R++ L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT------IG 499
+G+ F+ S K H ++ + N+LL++ I D GLA I R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558
+ APE R + +SDV+SFGVLL E+ + G +P D EE+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFX 257
Query: 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
+ + ++ D +M Q L C P RP ++V + + Q
Sbjct: 258 RRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 91
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGG-----TALDWNSRMKIALGTARGI 448
+ LV+ M G L L R + +++A A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I + T R G +
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 207
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 252
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 253 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 310
Query: 621 ESN 623
E N
Sbjct: 311 EEN 313
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 93
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 94 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 145
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 93
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 94 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 145
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Query: 342 LGKGSYGSTYKAILEDGTTV----VVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVR 396
LGKG + ++ D V +V + + +RE + ME+ + H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 83
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
++ D VV SL L R ++ + R +I LG ++H
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN-- 136
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI----GYRAPEVTETRKAS 512
+ H ++K N+ L +DL I D GLA + + +T+ Y APEV + S
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHS 537
+ DV+S G ++ +L GK P + S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 131/303 (43%), Gaps = 57/303 (18%)
Query: 342 LGKGSYGSTYKA------ILEDGTTVVVKRLREVAAT--KREFEQQMEVVGTIGKHSNVV 393
+G+G++G ++A E T V VK L+E A+ + +F+++ ++ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIV 113
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLH-------------------RNRSDGGTALDW 434
+ +++ YM G L L R S G L
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 435 NSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----F 490
++ IA A G+A++ KF H ++ + N L+ +++ I+D GL+ I +
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 491 PTTATRTIGYR--APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547
I R PE + + +SDV+++GV+L E+ + G P H++V+
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI---Y 287
Query: 548 WVRSVVREEWTAEVFDVELLKY-QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606
+VR D +L ++ E+ ++++ C +K+P RP + R++++
Sbjct: 288 YVR------------DGNILACPENCPLELYNLMRL---CWSKLPADRPSFCSIHRILQR 332
Query: 607 IQQ 609
+ +
Sbjct: 333 MCE 335
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 59/295 (20%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E++G G +G +KA DG T V++R V + E++++ + + H N+V
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRR---VKYNNEKAEREVKALAKLD-HVNIVHYNGC 73
Query: 399 Y-------YSKDEKLVVYSYMPAGSL--------FMLLHRNRSDGGTALDWNSRMK---- 439
+ + D+ L Y P S + + D GT W + +
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 440 ---IAL----GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492
+AL +G+ +IHS+ K H ++K SN+ L I D GL +
Sbjct: 134 DKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 493 TATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV 549
TR+ G Y +PE ++ ++ D+Y+ G++L E+L H D + ++
Sbjct: 191 KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-------HVC-DTAFETSKFF 242
Query: 550 RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604
+ +R+ +++FD + E+ ++Q L ++K P+ RP +++R +
Sbjct: 243 -TDLRDGIISDIFDKK-------EKTLLQKL------LSKKPEDRPNTSEILRTL 283
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Query: 342 LGKGSYGSTYKAILEDGTTV----VVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVR 396
LGKG + ++ D V +V + + +RE + ME+ + H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 83
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
++ D VV SL L R ++ + R +I LG ++H
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN-- 136
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI----GYRAPEVTETRKAS 512
+ H ++K N+ L +DL I D GLA + + +T+ Y APEV + S
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHS 537
+ DV+S G ++ +L GK P + S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 43/303 (14%)
Query: 342 LGKGSYGSTYKAIL------EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ + E T V +K + E A+ + EF + V+ H +VV
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 81
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGG-----TALDWNSRMKIALGTARGI 448
+ LV+ M G L L R + +++A A G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A++++ KF H ++ + N ++ +D I D G+ I + T R G +
Sbjct: 142 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 197
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
+PE + + SDV+SFGV+L E+ T + P Q ++ V+
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--------------- 242
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGT 620
V + LL D +M + ++ C P RP +++ I++ +P R + +
Sbjct: 243 VMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 300
Query: 621 ESN 623
E N
Sbjct: 301 EEN 303
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVV-KRLREVAATKREFEQQMEVVGTIGK---HSNVVPVRA 397
LGKG + Y+ D V K + + K +++M I K + +VV
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 398 YYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGA 457
++ D VV SL L R ++ + R T +G+ ++H+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ-----TIQGVQYLHNN--- 145
Query: 458 KFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQ 513
+ H ++K N+ L D++ I D GLA I F + T Y APEV + S
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 514 KSDVYSFGVLLLEMLTGKAPLQHS 537
+ D++S G +L +L GK P + S
Sbjct: 206 EVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 34/245 (13%)
Query: 323 DGSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVK--RLREVAATKRE---FE 377
DG + FD+E +G+GS+ + YK L+ TTV V L++ TK E F+
Sbjct: 24 DGRFLKFDIE---------IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFK 73
Query: 378 QQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVY--SYMPAGSLFMLLHRNRSDGGTAL- 432
++ E + + +H N+V + S K +K +V +G+L L R + L
Sbjct: 74 EEAEXLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLR 132
Query: 433 DWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC-ISDVGLAHL--IN 489
W ++ +G+ F+H+ H ++K N+ +T I D+GLA L +
Sbjct: 133 SWCRQI------LKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185
Query: 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV 549
F T + APE E K + DVY+FG LE T + P +S + + R V
Sbjct: 186 FAKAVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYP--YSECQNAAQIYRRV 242
Query: 550 RSVVR 554
S V+
Sbjct: 243 TSGVK 247
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Query: 342 LGKGSYGSTYKAILEDGTTV----VVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVR 396
LGKG + ++ D V +V + + +RE + ME+ + H +VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 87
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
++ D VV SL L R ++ + R +I LG ++H
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN-- 140
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI----GYRAPEVTETRKAS 512
+ H ++K N+ L +DL I D GLA + + +T+ Y APEV + S
Sbjct: 141 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHS 537
+ DV+S G ++ +L GK P + S
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G V +K ++E + ++ EF ++ +V+ + H +V +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 90
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ ++ YM G L L R T +++ + ++ S+ +F H
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG------YRAPEVTETRKASQKS 515
++ + N L+ +SD GL+ + T ++G + PEV K S KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 516 DVYSFGVLLLEMLT-GKAPLQ 535
D+++FGVL+ E+ + GK P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 29/223 (13%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVRA 397
E LG G +G + I +D G V +K+ R+ + K +E+ + H NVV R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 398 Y------YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
D L+ Y G L L N+ + L + + + ++
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 452 HSEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLINFPTTATRTIG---YRAPEV 505
H + H ++K N++L Q L I D+G A ++ T +G Y APE+
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 194
Query: 506 TETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRW 548
E +K + D +SFG L E +TG P LP W
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPF----------LPNW 227
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 29/223 (13%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVRA 397
E LG G +G + I +D G V +K+ R+ + K +E+ + H NVV R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 398 Y------YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
D L+ Y G L L N+ + L + + + ++
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 452 HSEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLINFPTTATRTIG---YRAPEV 505
H + H ++K N++L Q L I D+G A ++ T +G Y APE+
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 195
Query: 506 TETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRW 548
E +K + D +SFG L E +TG P LP W
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRPF----------LPNW 228
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ L+++ D T +D ++ I L +
Sbjct: 66 LLDVIHTENK------------LYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVV-KRLREVAATKREFEQQMEVVGTIGK---HSNVVPVRA 397
LGKG + Y+ D V K + + K +++M I K + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 398 YYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGA 457
++ D VV SL L R ++ + R T +G+ ++H+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ-----TIQGVQYLHNN--- 161
Query: 458 KFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQ 513
+ H ++K N+ L D++ I D GLA I F + T Y APEV + S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 514 KSDVYSFGVLLLEMLTGKAPLQHS 537
+ D++S G +L +L GK P + S
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 89
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 90 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 141
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 142 YIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 47/302 (15%)
Query: 340 EVLGKGSYGSTYKAIL-----EDGT-TVVVKRLREVAAT--KREFEQQMEVVGTIGKHSN 391
+ LG G++G +A ED V VK L+ A K +++++ +G+H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRN----RSDGGTALDWNSR------MKIA 441
+V + LV+ Y G L L R +D A+ NS + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA-NSTASTRDLLHFS 170
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NF--PTTAT 495
A+G+AF+ S+ H ++ + NVLLT I D GLA I N+ A
Sbjct: 171 SQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 496 RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE 555
+ + APE + +SDV+S+G+LL E+ + + L + +V
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LGLNPYPGILVNS 274
Query: 556 EWTAEVFDVELLKYQDVEEEMV--QMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELR 613
++ V D YQ + + I +C A P RP + +++ Q + R
Sbjct: 275 KFYKLVKD----GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330
Query: 614 NR 615
R
Sbjct: 331 ER 332
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 93
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 94 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 145
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 45/294 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD----------GGTALDWNSRMKIAL 442
+ A +V+ + G+L L R++ L + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT----- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 498 -IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVRE 555
+ + APE R + +SDV+SFGVLL E+ + G +P D E
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------E 258
Query: 556 EWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
E+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 259 EFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 341 VLGKGSYG----STYKAILEDGTTVVVKRLREVAATKREFEQQM---EVVGTIGKHSNVV 393
VLGKGS+G S K E ++K+ +V + E M V+ GK +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKK--DVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + + + D V Y+ G L + + R A+ + + + I G+ F+
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GLFFLQ 138
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTET 508
S+G + ++K NV+L + + I+D G+ + T+ T Y APE+
Sbjct: 139 SKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 195
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+ + D ++FGVLL EML G+AP + D++
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G V +K ++E + ++ EF ++ +V+ + H +V +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 75
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ ++ YM G L L R T +++ + ++ S+ +F H
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG------YRAPEVTETRKASQKS 515
++ + N L+ +SD GL+ + T ++G + PEV K S KS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 516 DVYSFGVLLLEMLT-GKAPLQ 535
D+++FGVL+ E+ + GK P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVV-KRLREVAATKREFEQQMEVVGTIGK---HSNVVPVRA 397
LGKG + Y+ D V K + + K +++M I K + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 398 YYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGA 457
++ D VV SL L R ++ + R T +G+ ++H+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ-----TIQGVQYLHNN--- 161
Query: 458 KFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQ 513
+ H ++K N+ L D++ I D GLA I F + T Y APEV + S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 514 KSDVYSFGVLLLEMLTGKAPLQHS 537
+ D++S G +L +L GK P + S
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR--------G 447
+++++ +V+ ++ D T +D ++ I L + G
Sbjct: 71 LDVIHTENKLYLVFEFL------------HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 448 IAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAP 503
+AF HS + H ++K N+L+ + ++D GLA P T+ YRAP
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 504 EV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
E+ + S D++S G + EM+T +A
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG-----KHSNVVP 394
+G GSYG K + DG +V K L + T E E+QM +V + KH N+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQM-LVSEVNLLRELKHPNIV- 68
Query: 395 VRAYYYSKDEK----LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
R Y D +V Y G L ++ + + LD +++ +
Sbjct: 69 -RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKE 126
Query: 451 IH--SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPE 504
H S+GG H ++K +NV L N + D GLA ++N T+ + T Y +PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE 186
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
++KSD++S G LL E+ P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G V +K ++E + ++ EF ++ +V+ + H +V +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 74
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ ++ YM G L L R T +++ + ++ S+ +F H
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLH 127
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG------YRAPEVTETRKASQKS 515
++ + N L+ +SD GL+ + T ++G + PEV K S KS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 516 DVYSFGVLLLEMLT-GKAPLQ 535
D+++FGVL+ E+ + GK P +
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYE 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G V +K ++E + ++ EF ++ +V+ + H +V +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 90
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ ++ YM G L L R T +++ + ++ S+ +F H
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG------YRAPEVTETRKASQKS 515
++ + N L+ +SD GL+ + T ++G + PEV K S KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 516 DVYSFGVLLLEMLT-GKAPLQ 535
D+++FGVL+ E+ + GK P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G V +K ++E + ++ EF ++ +V+ + H +V +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 70
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ ++ YM G L L R T +++ + ++ S+ +F H
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG------YRAPEVTETRKASQKS 515
++ + N L+ +SD GL+ + T ++G + PEV K S KS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 516 DVYSFGVLLLEMLT-GKAPLQ 535
D+++FGVL+ E+ + GK P +
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE 203
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 341 VLGKGSYG----STYKAILEDGTTVVVKRLREVAATKREFEQQM---EVVGTIGKHSNVV 393
VLGKGS+G S K E ++K+ +V + E M V+ GK +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKK--DVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + + + D V Y+ G L + + R A+ + + + I G+ F+
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GLFFLQ 459
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTET 508
S+G + ++K NV+L + + I+D G+ + T+ T Y APE+
Sbjct: 460 SKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 516
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+ + D ++FGVLL EML G+AP + D++
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 33/219 (15%)
Query: 330 DLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK 388
D+E+ + E +G+G+YG YKA + G V +K++R T+ + + + +
Sbjct: 5 DMENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 389 --HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446
H N+V + +++++ +V+ ++ D +D ++ I L +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIK 110
Query: 447 --------GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTA 494
G+AF HS + H ++K N+L+ + ++D GLA P T
Sbjct: 111 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 167
Query: 495 TRTIGYRAPEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
T+ YRAPE+ + S D++S G + EM+T +A
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 340 EVLGKGSYGST-----YKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP 394
E LG+GS+G YK + + ++L + + E+++ + + +H +++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIK 73
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ + + ++V Y G LF ++ + R + ++ A I + H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA------IEYCHR 126
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---NFPTTATRTIGYRAPEVTETR- 509
K H ++K N+LL +LN I+D GL++++ NF T+ + Y APEV +
Sbjct: 127 H---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 510 KASQKSDVYSFGVLLLEMLTGKAPL 534
A + DV+S G++L ML G+ P
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG G +G V +K ++E + ++ EF ++ +V+ + H +V +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 81
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
+ ++ YM G L L R T +++ + ++ S+ +F H
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLH 134
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG------YRAPEVTETRKASQKS 515
++ + N L+ +SD GL+ + T ++G + PEV K S KS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 516 DVYSFGVLLLEMLT-GKAPLQ 535
D+++FGVL+ E+ + GK P +
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYE 214
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 342 LGKGSYGSTYKAILED------GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ D T V VK + E A+ + EF + V+ H +VV
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 84
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGI 448
+ LVV M G L L R + G +++A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A+++++ KF H N+ + N ++ D I D G+ I + T R G +
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 200
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
APE + + SD++SFGV+L E+ + + P Q ++ V+
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 257
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ + LH++ D +D ++ I L +
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKD---FMDASALTGIPLPLIKSYLFQLLQ 114
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 115 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 342 LGKGSYGSTYKAILED------GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ D T V VK + E A+ + EF + V+ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGI 448
+ LVV M G L L R + G +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A+++++ KF H N+ + N ++ D I D G+ I + T R G +
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 199
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
APE + + SD++SFGV+L E+ + + P Q ++ V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 74 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 122 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178
Query: 503 PEVTETRK-ASQKSDVYSFGVLLLEMLTGKA 532
PE+ K S D++S G + EM+T +A
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 67 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 503 PEVTETRK-ASQKSDVYSFGVLLLEMLTGKA 532
PE+ K S D++S G + EM+T +A
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 248
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 107
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 108 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 159
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T YRAPE+
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLN 216
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 74 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 122 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 67 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 66 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 67 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 66 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 257
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKSQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GL H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 68 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 5 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 64
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 65 SEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 123
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 124 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 180
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I + A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 181 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 240
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 241 KSNQEVLEF 249
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 13 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 72
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 73 SEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 131
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I + A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 249 KSNQEVLEF 257
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 110
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 111 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 162
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T YRAPE+
Sbjct: 163 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLN 219
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 294
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 341 VLGKGSYGSTYKAILED--GTT--VVVKRLR-EVAATKREFEQQM---EVVGTIGKHSNV 392
VLGKGS+G K +L D GT +K L+ +V + E M V+ + K +
Sbjct: 26 VLGKGSFG---KVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 82
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR-NRSDGGTALDWNSRMKIALGTARGIAFI 451
+ + + + D V Y+ G L + + + A+ + + + I G+ F+
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLFFL 136
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA--HLINFPTTA--TRTIGYRAPEVTE 507
H G + ++K NV+L + + I+D G+ H+++ TT T Y APE+
Sbjct: 137 HKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
+ + D +++GVLL EML G+ P D++
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 248
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 122/300 (40%), Gaps = 49/300 (16%)
Query: 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHS 390
+ LG+G +G KA TTV VK L+E A+ R+ + V+ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMK 439
+V+ + L++ Y GSL L +R G ++LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 440 IALGTARGIAFIHSEG-----GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA 494
+ +G A+ S+G K H ++ + N+L+ + ISD GL+ + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 495 TRT------IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547
+ + + A E + +SDV+SFGVLL E++T G P + + +L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ R + +E +M ++ L C + PD RP D+ + +E++
Sbjct: 267 TGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 83
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 84 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 135
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T YRAPE+
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 192
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 13 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 72
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 73 SEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 131
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I + A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 249 KSNQEVLEF 257
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D GLA H + T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 342 LGKGSYGSTYKAILE---DGT--TVVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
LG+G +G + DGT V VK L+ A + ++Q+++++ T+ H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIK 97
Query: 395 VRAYYYSKDEK--LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ +V Y+P GSL L R+ ++ + A G+A++H
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH 151
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IGYRAPEV 505
++ + H ++ + NVLL D I D GLA + R + + APE
Sbjct: 152 AQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
+ K SDV+SFGV L E+LT
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 22/219 (10%)
Query: 326 YFNFDLEDLLRASAEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVG 384
+F D E L E+ G GS+G+ Y A + + V +K++ + K+ E+ +++
Sbjct: 47 FFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMS--YSGKQSNEKWQDIIK 103
Query: 385 TIG-----KHSNVVPVRAYYYSKDEKLVVYSY-MPAGSLFMLLHRNRSDGGTALDWNSRM 438
+ +H N + R Y + +V Y + + S + +H+ L
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK------PLQEVEIA 157
Query: 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI 498
+ G +G+A++HS H ++K+ N+LL++ + D G A ++ T
Sbjct: 158 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 214
Query: 499 GYRAPEVTETRKASQ---KSDVYSFGVLLLEMLTGKAPL 534
+ APEV Q K DV+S G+ +E+ K PL
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 342 LGKGSYGSTYKAILEDGTTV----VVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVR 396
LGKG + ++ D V +V + + +RE + ME+ + H +VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 107
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
++ D VV SL L R ++ + R +I LG ++H
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN-- 160
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKAS 512
+ H ++K N+ L +DL I D GLA + + + T Y APEV + S
Sbjct: 161 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHS 537
+ DV+S G ++ +L GK P + S
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 342 LGKGSYGSTYKAILEDGTTV----VVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVR 396
LGKG + ++ D V +V + + +RE + ME+ + H +VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 105
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
++ D VV SL L R ++ + R +I LG ++H
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN-- 158
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKAS 512
+ H ++K N+ L +DL I D GLA + + + T Y APEV + S
Sbjct: 159 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHS 537
+ DV+S G ++ +L GK P + S
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 28 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 87
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 88 SEQDELDFLMEAL-IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I + A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 264 KSNQEVLEF 272
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 28 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 87
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 88 SEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 146
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I + A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 264 KSNQEVLEF 272
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 30 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 89
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 90 SEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 148
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 149 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 205
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I + A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 206 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 265
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 266 KSNQEVLEF 274
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 22/219 (10%)
Query: 326 YFNFDLEDLLRASAEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVG 384
+F D E L E+ G GS+G+ Y A + + V +K++ + K+ E+ +++
Sbjct: 8 FFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMS--YSGKQSNEKWQDIIK 64
Query: 385 TIG-----KHSNVVPVRAYYYSKDEKLVVYSY-MPAGSLFMLLHRNRSDGGTALDWNSRM 438
+ +H N + R Y + +V Y + + S + +H+ L
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK------PLQEVEIA 118
Query: 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI 498
+ G +G+A++HS H ++K+ N+LL++ + D G A ++ T
Sbjct: 119 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 175
Query: 499 GYRAPEVTETRKASQ---KSDVYSFGVLLLEMLTGKAPL 534
+ APEV Q K DV+S G+ +E+ K PL
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 259
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 312
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG-----KHSNVVP 394
+G GSYG K + DG +V K L + T E E+QM +V + KH N+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQM-LVSEVNLLRELKHPNIV- 68
Query: 395 VRAYYYSKDEK----LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
R Y D +V Y G L ++ + + LD +++ +
Sbjct: 69 -RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKE 126
Query: 451 IH--SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----FPTTATRTIGYRAPE 504
H S+GG H ++K +NV L N + D GLA ++N F T Y +PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE 186
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
++KSD++S G LL E+ P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 257
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 122/300 (40%), Gaps = 49/300 (16%)
Query: 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHS 390
+ LG+G +G KA TTV VK L+E A+ R+ + V+ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMK 439
+V+ + L++ Y GSL L +R G ++LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 440 IALGTARGIAFIHSEG-----GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA 494
+ +G A+ S+G K H ++ + N+L+ + ISD GL+ + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 495 TRT------IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547
+ + + A E + +SDV+SFGVLL E++T G P + + +L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ R + +E +M ++ L C + PD RP D+ + +E++
Sbjct: 267 TGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 342 LGKGSYGSTYKAILEDGTTV----VVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVR 396
LGKG + ++ D V +V + + +RE + ME+ + H +VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 81
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
++ D VV SL L R ++ + R +I LG ++H
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN-- 134
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKAS 512
+ H ++K N+ L +DL I D GLA + + + T Y APEV + S
Sbjct: 135 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 513 QKSDVYSFGVLLLEMLTGKAPLQHS 537
+ DV+S G ++ +L GK P + S
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 332 EDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT--KREFEQQMEVVGTIGK 388
EDL+ E +G+G++G + L D T V VK RE K +F Q+ ++
Sbjct: 114 EDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS- 170
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
H N+V + K +V + G L R++G L + +++ A G+
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGAR-LRVKTLLQMVGDAAAGM 226
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL----AHLINFPTTATRTI--GYRA 502
++ S+ H ++ + N L+T+ ISD G+ A + + R + + A
Sbjct: 227 EYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTA 283
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
PE + S +SDV+SFG+LL E + G +P
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 248
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 342 LGKGSYGSTYKAILED------GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ D T V VK + E A+ + EF + V+ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGI 448
+ LVV M G L L R + G +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A+++++ KF H ++ + N ++ D I D G+ I + T R G +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAYYRKGGKGLLPVRWM 199
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
APE + + SD++SFGV+L E+ + + P Q ++ V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 342 LGKGSYGSTYKA----ILEDGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVV 393
LG+G++G +A I + T TV VK L+E A + R +++++ IG H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 394 PVR-AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIA 441
+ A +V+ + G+L L R++ L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT---- 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 498 --IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------- 248
Query: 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVVPVRAYY 399
LG G++G YKA ++ + ++ E + + ++ ++E++ T H +V + Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-HPYIVKLLGAY 77
Query: 400 YSKDEKLVVYSYMPAGSL-FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
Y + ++ + P G++ ++L +R + R + + F+HS+ +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---R 129
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR-----TIGYRAPEVT--ETRKA 511
H ++K+ NVL+T + + ++D G++ N T R T + APEV ET K
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 512 S---QKSDVYSFGVLLLEMLTGKAP 533
+ K+D++S G+ L+EM + P
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 133 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 79
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 80 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 133 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 140 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 83
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 84 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 136
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 137 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT 529
R + +SDV+S+GV + E++T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 141 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 132 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 143 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 80
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 81 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 133
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 134 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 81
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 82 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 134
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 82
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 83 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 135
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 136 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 70 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 69 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 27/239 (11%)
Query: 330 DLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVAATKREFEQQM 380
DL+++ R + + LG G++G Y+ + V VK L EV + + E + M
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 381 EVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNS 436
E + I K H N+V + ++ M G L F+ R R ++L
Sbjct: 84 EAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVGLAHLINFPT- 492
+ +A A G ++ F H +I + N LLT G I D G+A I +
Sbjct: 143 LLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
A + + PE + K+D +SFGVLL E+ + G P + +V++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 258
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 67 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQ---QMEVVGTIGKHSNVVPVRAY 398
LG G++G YKA ++ + ++ E ++ E E ++E++ T H +V +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCD-HPYIVKLLGA 84
Query: 399 YYSKDEKLVVYSYMPAGSL-FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGA 457
YY + ++ + P G++ ++L +R + R + + F+HS+
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK--- 136
Query: 458 KFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR-----TIGYRAPEVT--ETRK 510
+ H ++K+ NVL+T + + ++D G++ N T R T + APEV ET K
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 511 AS---QKSDVYSFGVLLLEMLTGKAP 533
+ K+D++S G+ L+EM + P
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 332 EDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT--KREFEQQMEVVGTIGK 388
EDL+ E +G+G++G + L D T V VK RE K +F Q+ ++
Sbjct: 114 EDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS- 170
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
H N+V + K +V + G L R++G L + +++ A G+
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGAR-LRVKTLLQMVGDAAAGM 226
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL----AHLINFPTTATRTI--GYRA 502
++ S+ H ++ + N L+T+ ISD G+ A + + R + + A
Sbjct: 227 EYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTA 283
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
PE + S +SDV+SFG+LL E + G +P
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 67 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 66 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 170
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 67 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G++F HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 115 GLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 68 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 138/313 (44%), Gaps = 58/313 (18%)
Query: 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGT 385
F D +++ E++G G +G +KA DG T V+KR V + E++++ +
Sbjct: 9 FGMDFKEI-----ELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALAK 60
Query: 386 IGKHSNVVPVRAYY---------------YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGG 429
+ H N+V + SK + L + + G+L + + R G
Sbjct: 61 LD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---G 116
Query: 430 TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489
LD +++ +G+ +IHS+ K + ++K SN+ L I D GL +
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK 173
Query: 490 FPTTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLP 546
R+ G Y +PE ++ ++ D+Y+ G++L E+L H D +
Sbjct: 174 NDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-------HVC-DTAFETS 225
Query: 547 RWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606
++ + +R+ +++FD + E+ ++Q L ++K P+ RP +++R +
Sbjct: 226 KFF-TDLRDGIISDIFDKK-------EKTLLQKL------LSKKPEDRPNTSEILRTLTV 271
Query: 607 IQQ-PELRNRASS 618
++ PE R ++
Sbjct: 272 WKKSPEKNERHTA 284
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 11 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 71 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I GLA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 342 LGKGSYGSTYKAILED------GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ D T V VK + E A+ + EF + V+ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGI 448
+ LVV M G L L R + G +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A+++++ KF H ++ + N ++ D I D G+ I + T R G +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 199
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
APE + + SD++SFGV+L E+ + + P Q ++ V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 21/217 (9%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K L+ EV K E + + +H +
Sbjct: 14 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + + ++H
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLH 125
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL-INFPTTATRTIG---YRAPEVTET 508
SE + ++K N++L +D + I+D GL I T G Y APEV E
Sbjct: 126 SEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 183
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 21/217 (9%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K L+ EV K E + + +H +
Sbjct: 16 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + + ++H
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLH 127
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL-INFPTTATRTIG---YRAPEVTET 508
SE + ++K N++L +D + I+D GL I T G Y APEV E
Sbjct: 128 SEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 185
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 222
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 69 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T T
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 69 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 117 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 66 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 170
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 80
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 81 CRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 133
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 134 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR--------G 447
+++++ +V+ ++ D +D ++ I L + G
Sbjct: 68 LDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 448 IAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAP 503
+AF HS + H ++K N+L+ + ++D GLA P T+ YRAP
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 504 EV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
E+ + S D++S G + EM+T +A
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLL--TQDLNGCISDVGLAHLIN-------FPTTATR 496
RG+ +IHS A H ++K SN+LL T DL C D GLA + + F T
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKIC--DFGLARVADPDHDHTGFLTEYVA 191
Query: 497 TIGYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
T YRAPE+ K KS D++S G +L EML+ +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 89
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 90 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 142
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 143 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 70 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 21/217 (9%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K L+ EV K E + + +H +
Sbjct: 15 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + + ++H
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLH 126
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL-INFPTTATRTIG---YRAPEVTET 508
SE + ++K N++L +D + I+D GL I T G Y APEV E
Sbjct: 127 SEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 184
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 221
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 68 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 341 VLGKGSYGSTYKAILEDGTT-------VVVKRLREVAATKREFEQQMEVVGTIGKHSNVV 393
VLGKGS+G + +D T V+ KR + K ++++++ + H N++
Sbjct: 39 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIM 95
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ ++ K +V G LF ++ R R A +I GI ++H
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIRQVLSGITYMH 149
Query: 453 SEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVT 506
K H ++K N+LL ++D N I D GL+ IG Y APEV
Sbjct: 150 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRWVR 550
+K DV+S GV+L +L+G P + D++ +LP+W +
Sbjct: 207 HG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 259
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 27/239 (11%)
Query: 330 DLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVAATKREFEQQM 380
DL+++ R + + LG G++G Y+ + V VK L EV + + E + M
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 381 EVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNS 436
E + I K H N+V + ++ M G L F+ R R ++L
Sbjct: 84 EAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVGLAHLINFPT- 492
+ +A A G ++ F H +I + N LLT G I D G+A I +
Sbjct: 143 LLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
A + + PE + K+D +SFGVLL E+ + G P + +V++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 258
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVV--- 393
+G G+YGS A + G V VK+L + + KR + +++ ++ + KH NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 394 ----PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
P R+ D LV + M A ++ + +D + RG+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH-LMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLK 139
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPEVT-E 507
+IHS A H ++K SN+ + +D I D LA H + T T YRAPE+
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+Q D++S G ++ E+LTG+ + H D + L
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 68 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 31/209 (14%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPVR 396
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR--------GI 448
+++++ +V+ ++ D +D ++ I L + G+
Sbjct: 69 DVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPE 504
AF HS + H ++K N+L+ + ++D GLA P T+ YRAPE
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 505 V-TETRKASQKSDVYSFGVLLLEMLTGKA 532
+ + S D++S G + EM+T +A
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 340 EVLGKGSYGSTYKAILEDGTT---VVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
+VLG G++ A ED T V +K + + A +E E ++ V+ I KH N+V
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVA 80
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y S ++ + G LF R G SR+ + A + ++H
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL 135
Query: 455 GGAKFTHGNIKSSNVL---LTQDLNGCISDVGLAHLIN---FPTTATRTIGYRAPEVTET 508
G H ++K N+L L +D ISD GL+ + + +TA T GY APEV
Sbjct: 136 G---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
+ S+ D +S GV+ +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 82
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 83 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 135
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 136 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 81
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 82 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 134
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K LR EV K E + + +H +
Sbjct: 16 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + +R A + ++H
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGA-EIVSALEYLH 127
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL-INFPTTATRTIG---YRAPEVTET 508
S + +IK N++L +D + I+D GL I+ T G Y APEV E
Sbjct: 128 SR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 184
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 85
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 86 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 138
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 139 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 79
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 80 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 27/239 (11%)
Query: 330 DLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVAATKREFEQQM 380
DL+++ R + + LG G++G Y+ + V VK L EV + + E + M
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 381 EVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNS 436
E + I K H N+V + ++ M G L F+ R R ++L
Sbjct: 90 EAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 148
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVGLAHLINFPT- 492
+ +A A G ++ F H +I + N LLT G I D G+A I +
Sbjct: 149 LLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 205
Query: 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
A + + PE + K+D +SFGVLL E+ + G P + +V++
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 264
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 28 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVY 87
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 88 SEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I + A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 264 KSNQEVLEF 272
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 27/239 (11%)
Query: 330 DLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVAATKREFEQQM 380
DL+++ R + + LG G++G Y+ + V VK L EV + + E + M
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 381 EVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNS 436
E + I K H N+V + ++ M G L F+ R R ++L
Sbjct: 84 EAL-IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVGLAHLINFPT- 492
+ +A A G ++ F H +I + N LLT G I D G+A I +
Sbjct: 143 LLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
A + + PE + K+D +SFGVLL E+ + G P + +V++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 258
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKRE 375
G+ F + D + E LG G + K L+ + KR + + ++ +
Sbjct: 1 GTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 376 FEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWN 435
E+++ ++ I +H NV+ + Y +K + +++ + G LF L S L
Sbjct: 61 IEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 436 SRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINF 490
+ G+ ++HS + H ++K N++L D N I D GLAH I+F
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDF 170
Query: 491 PTTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
G + APE+ ++D++S GV+ +L+G +P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+L+ + I D GLA + + F T T
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 82
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 83 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 135
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 136 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 86
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 87 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 139
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 140 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT 529
R + +SDV+S+GV + E++T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 126/292 (43%), Gaps = 40/292 (13%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQ--------QMEVVGTIGKHSNVV 393
LG+G+Y + YK G + + L + + E E+ ++ ++ + KH+N+V
Sbjct: 10 LGEGTYATVYK-----GKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIV 63
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ +++ +V+ Y+ L + D G ++ ++ RG+A+ H
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDKD-----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA----TRTIGYRAPEV-TET 508
+ K H ++K N+L+ + ++D GLA + PT T+ YR P++ +
Sbjct: 119 Q---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD-LPRWVRSVVREEWTAEVFDVELL 567
S + D++ G + EM TG+ S ++ + + R + + E W + + E
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235
Query: 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMD-DVVRMIEQIQQPELRNRASS 618
Y + +L A P++D D ++ ++ Q E RNR S+
Sbjct: 236 TYNYPKYRAEALLSHA-----------PRLDSDGADLLTKLLQFEGRNRISA 276
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K LR EV K E + + +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + +R A + ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGA-EIVSALEYLH 122
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL-INFPTTATRTIG---YRAPEVTET 508
S + +IK N++L +D + I+D GL I+ T G Y APEV E
Sbjct: 123 SRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 324 GSYFNFDLEDLLRASAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKRE 375
G+ F + D + E LG G + K L+ + KR + + ++ +
Sbjct: 1 GTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 376 FEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWN 435
E+++ ++ I +H NV+ + Y +K + +++ + G LF L S L
Sbjct: 61 IEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 436 SRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINF 490
+ G+ ++HS + H ++K N++L D N I D GLAH I+F
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDF 170
Query: 491 PTTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
G + APE+ ++D++S GV+ +L+G +P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 82
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 83 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 135
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 136 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 341 VLGKGSYGSTYKAILEDGTT-------VVVKRLREVAATKREFEQQMEVVGTIGKHSNVV 393
VLGKGS+G + +D T V+ KR + K ++++++ + H N++
Sbjct: 33 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIM 89
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ ++ K +V G LF ++ R R A +I GI ++H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIRQVLSGITYMH 143
Query: 453 SEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVT 506
K H ++K N+LL ++D N I D GL+ IG Y APEV
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 200
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRWVR 550
+K DV+S GV+L +L+G P + D++ +LP+W +
Sbjct: 201 HG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 253
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 104
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 105 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 157
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 158 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K LR EV K E + + +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + +R A + ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGA-EIVSALEYLH 122
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--LINFPTTATR--TIGYRAPEVTET 508
S + +IK N++L +D + I+D GL + + T T T Y APEV E
Sbjct: 123 SR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 340 EVLGKGSYGSTYKAILEDGTT---VVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
+VLG G++ A ED T V +K + + A +E E ++ V+ I KH N+V
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVA 80
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y S ++ + G LF R G SR+ + A + ++H
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL 135
Query: 455 GGAKFTHGNIKSSNVL---LTQDLNGCISDVGLAHLIN---FPTTATRTIGYRAPEVTET 508
G H ++K N+L L +D ISD GL+ + + +TA T GY APEV
Sbjct: 136 G---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
+ S+ D +S GV+ +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 342 LGKGSYGSTYKAILED------GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ D T V VK + E A+ + EF + V+ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGI 448
+ LVV M G L L R + G +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A+++++ KF H ++ + N ++ D I D G+ I T R G +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-ETDXXRKGGKGLLPVRWM 199
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
APE + + SD++SFGV+L E+ + + P Q ++ V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 101/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 31 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 90
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 91 SEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 149
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 150 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 206
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 266
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 267 KSNQEVLEF 275
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 342 LGKGSYGSTYKAILED------GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ D T V VK + E A+ + EF + V+ H +VV
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 82
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGI 448
+ LVV M G L L R + G +++A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A+++++ KF H ++ + N ++ D I D G+ I + T R G +
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 198
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
APE + + SD++SFGV+L E+ + + P Q ++ V+
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 241
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 340 EVLGKGSYGSTYKAILEDGTT---VVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
+VLG G++ A ED T V +K + + A +E E ++ V+ I KH N+V
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVA 80
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y S ++ + G LF R G SR+ + A + ++H
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL 135
Query: 455 GGAKFTHGNIKSSNVL---LTQDLNGCISDVGLAHLIN---FPTTATRTIGYRAPEVTET 508
G H ++K N+L L +D ISD GL+ + + +TA T GY APEV
Sbjct: 136 G---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
+ S+ D +S GV+ +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPE 504
RG+ +IHS G H ++K SNV + +D I D GLA + T T YRAPE
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPE 190
Query: 505 VT-ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
+ +Q D++S G ++ E+L GKA S + D
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 228
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K LR EV K E + + +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + +R A + ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGA-EIVSALEYLH 122
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL-INFPTTATRTIG---YRAPEVTET 508
S + +IK N++L +D + I+D GL I+ T G Y APEV E
Sbjct: 123 SRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K LR EV K E + + +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + +R A + ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGA-EIVSALEYLH 122
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL-INFPTTATRTIG---YRAPEVTET 508
S + +IK N++L +D + I+D GL I+ T G Y APEV E
Sbjct: 123 SRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 101/249 (40%), Gaps = 27/249 (10%)
Query: 320 CFLDGSYFNFDLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVA 370
CF + DL+++ R + + LG G++G Y+ + V VK L EV
Sbjct: 54 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 113
Query: 371 ATKREFEQQMEVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRS 426
+ + E + ME + I K H N+V + ++ M G L F+ R R
Sbjct: 114 SEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 172
Query: 427 DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVG 483
++L + +A A G ++ F H +I + N LLT G I D G
Sbjct: 173 SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 229
Query: 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQH 536
+A I A + + PE + K+D +SFGVLL E+ + G P
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289
Query: 537 SGHDDVVDL 545
+ +V++
Sbjct: 290 KSNQEVLEF 298
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 79
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 80 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K LR EV K E + + +H +
Sbjct: 14 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + +R A + ++H
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGA-EIVSALEYLH 125
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--LINFPTTATR--TIGYRAPEVTET 508
S + +IK N++L +D + I+D GL + + T T T Y APEV E
Sbjct: 126 SRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 182
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 219
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 342 LGKGSYGSTYKAILED------GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ D T V VK + E A+ + EF + V+ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGI 448
+ LVV M G L L R + G +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A+++++ KF H ++ + N ++ D I D G+ I T R G +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-ETDXXRKGGKGLLPVRWM 199
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
APE + + SD++SFGV+L E+ + + P Q ++ V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 342 LGKGSYGSTYKAILED------GTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVV 393
LG+GS+G Y+ D T V VK + E A+ + EF + V+ H +VV
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 80
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGI 448
+ LVV M G L L R + G +++A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG-------YR 501
A+++++ KF H ++ + N ++ D I D G+ I T R G +
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-ETDXXRKGGKGLLPVRWM 196
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
APE + + SD++SFGV+L E+ + + P Q ++ V+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 239
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 79
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 80 CRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 340 EVLGKGSYGSTY--KAILEDGTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPVR 396
EVLG G++ + K L G +K +++ A + E ++ V+ I KH N+V +
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLE 72
Query: 397 AYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
Y S +V + G LF +L R G + ++ + I + ++H G
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILER-----GVYTEKDASLVIQ-QVLSAVKYLHENG 126
Query: 456 GAKFTHGNIKSSNVL-LTQDLNG--CISDVGLAHLIN--FPTTATRTIGYRAPEVTETRK 510
H ++K N+L LT + N I+D GL+ + +TA T GY APEV +
Sbjct: 127 ---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPL 534
S+ D +S GV+ +L G P
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 73
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 74 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 126
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 127 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K LR EV K E + + +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + +R A + ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGA-EIVSALEYLH 122
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--LINFPTTATR--TIGYRAPEVTET 508
S + +IK N++L +D + I+D GL + + T T T Y APEV E
Sbjct: 123 SRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K L+ EV K E + + +H +
Sbjct: 154 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + + ++H
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLH 265
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--LINFPTTAT--RTIGYRAPEVTET 508
SE + ++K N++L +D + I+D GL + + T T T Y APEV E
Sbjct: 266 SEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 323
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 360
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 370 AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGG 429
++ + E+++ ++ I +H NV+ + Y +K + +++ + G LF L S
Sbjct: 55 GVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 430 TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGL 484
L + G+ ++HS + H ++K N++L D N I D GL
Sbjct: 111 --LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGL 164
Query: 485 AHLINFPTTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
AH I+F G + APE+ ++D++S GV+ +L+G +P
Sbjct: 165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 27/239 (11%)
Query: 330 DLEDLLRASAEV---LGKGSYGSTYKAILE------DGTTVVVKRLREVAATKREFEQQM 380
DL+++ R + + LG G++G Y+ + V VK L EV + + E + M
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 381 EVVGTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSL--FMLLHRNRSDGGTALDWNS 436
E + I K H N+V + ++ M G L F+ R R ++L
Sbjct: 110 EAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 168
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG---CISDVGLAHLINFPT- 492
+ +A A G ++ F H +I + N LLT G I D G+A I +
Sbjct: 169 LLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545
A + + PE + K+D +SFGVLL E+ + G P + +V++
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 284
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S L + G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVY 128
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 331 LEDLLRASAE-----VLGKGSYGSTYKAIL--EDGT--TVVVKRLREVAATKREFEQQME 381
LED+L + +LGKG +GS +A L EDG+ V VK L+ + E+ +
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 382 VVGTIGK--HSNVVPVRAYYYSKDEK------LVVYSYMPAGSLFMLLHRNR-SDGGTAL 432
+ + H +V + K +V+ +M G L L +R + L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 433 DWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI---- 488
+ ++ + A G+ ++ S F H ++ + N +L +D+ C++D GL+ I
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 489 --NFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
+ + + A E + SDV++FGV + E++T G+ P
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLR-EVAATKREFEQQMEVVGTI--GKHSNV 392
++LGKG++G K IL G +K L+ EV K E + + +H +
Sbjct: 157 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ + + D V Y G LF L R R + + ++H
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLH 268
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--LINFPTTAT--RTIGYRAPEVTET 508
SE + ++K N++L +D + I+D GL + + T T T Y APEV E
Sbjct: 269 SEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 326
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545
+ D + GV++ EM+ G+ P + H+ + +L
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 363
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 72
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S L + G+
Sbjct: 73 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVY 127
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 128 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 183
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 340 EVLGKGSYGSTYKAILEDGTT---VVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVP 394
+VLG G++ A ED T V +K + + A +E E ++ V+ I KH N+V
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVA 80
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ Y S ++ + G LF R G SR+ + A + ++H
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL 135
Query: 455 GGAKFTHGNIKSSNVL---LTQDLNGCISDVGLAHLIN---FPTTATRTIGYRAPEVTET 508
G H ++K N+L L +D ISD GL+ + + +TA T GY APEV
Sbjct: 136 G---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
+ S+ D +S GV+ +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 370 AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGG 429
++ + E+++ ++ I +H NV+ + Y +K + +++ + G LF L S
Sbjct: 55 GVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 430 TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGL 484
L + G+ ++HS + H ++K N++L D N I D GL
Sbjct: 111 --LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGL 164
Query: 485 AHLINFPTTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
AH I+F G + APE+ ++D++S GV+ +L+G +P
Sbjct: 165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V + ++R T+ + + + + H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 67 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V + ++R T+ + + + + H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ +V+ ++ D +D ++ I L +
Sbjct: 66 LLDVIHTENKLYLVFEFL------------HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T T+ YRA
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 34/230 (14%)
Query: 341 VLGKGSYGSTYKAILEDGTT---VVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
+LGKGS+G K +D T VK + + +A ++ + V + K H N++ +
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 396 RAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+V G LF ++ R R A +I GI ++H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVFSGITYMHKH 140
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTATRTIG---YRAPEVTET 508
H ++K N+LL C I D GL+ T IG Y APEV
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRW 548
+K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S L + G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVY 128
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR--------G 447
+++++ +V+ ++ D +D ++ I L + G
Sbjct: 71 LDVIHTENKLYLVFEFL------------SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 448 IAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAP 503
+AF HS + H ++K N+L+ + ++D GLA P T+ YRAP
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 504 EV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
E+ + S D++S G + EM+T +A
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 72
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S L + G+
Sbjct: 73 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVY 127
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 128 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 183
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 396 RAYYYSKDEKLVVYSYMPAG-SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+++++ +V+ ++ FM + T + +G+AF HS
Sbjct: 71 LDVIHTENKLYLVFEFLSMDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEV-TETR 509
+ H ++K N+L+ + ++D GLA P T+ YRAPE+ +
Sbjct: 126 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 510 KASQKSDVYSFGVLLLEMLTGKA 532
S D++S G + EM+T +A
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 23/222 (10%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRL--REVAATKREF---EQQMEVVGTIG 387
DLLR V+G+GSY L+ + R+ +E+ + + + V
Sbjct: 55 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS-DGGTALDWNSRMKIALGTAR 446
H +V + + + ++ V Y+ G L + R R A +++ + +AL
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN--- 167
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI----GYRA 502
++H G + ++K NVLL + + ++D G+ P T T Y A
Sbjct: 168 ---YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD 544
PE+ D ++ GVL+ EM+ G++P G D D
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 263
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 22/202 (10%)
Query: 341 VLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVRA 397
++G+GSYG K +D G V +K+ E K + M + + +H N+V +
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 398 YYYSKDEKLVVYSYMPAGSLFML-LHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
K +V+ ++ L L L N LD+ K GI F HS
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSHN- 144
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPE-VTETR 509
H +IK N+L++Q + D G A + P ATR YRAPE +
Sbjct: 145 --IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW--YRAPELLVGDV 200
Query: 510 KASQKSDVYSFGVLLLEMLTGK 531
K + DV++ G L+ EM G+
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S L + G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVY 128
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 396 RAYYYSKDEKLVVYSYMPAG-SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+++++ +V+ ++ FM + T + +G+AF HS
Sbjct: 69 LDVIHTENKLYLVFEFLSMDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEV-TETR 509
+ H ++K N+L+ + ++D GLA P T+ YRAPE+ +
Sbjct: 124 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 510 KASQKSDVYSFGVLLLEMLTGKA 532
S D++S G + EM+T +A
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 341 VLGKGSYGSTYKAILEDGTT-------VVVKRLREVAATKREFEQQMEVVGTIGKHSNVV 393
VLGKGS+G + +D T V+ KR + K ++++++ + H N++
Sbjct: 56 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIM 112
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ ++ K +V G LF ++ R R A +I GI ++H
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIRQVLSGITYMH 166
Query: 453 SEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVT 506
K H ++K N+LL ++D N I D GL+ IG Y APEV
Sbjct: 167 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 223
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRWVR 550
+K DV+S GV+L +L+G P + D++ +LP+W +
Sbjct: 224 HG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 276
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 121/300 (40%), Gaps = 49/300 (16%)
Query: 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHS 390
+ LG+G +G KA TTV VK L+E A+ R+ + V+ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMK 439
+V+ + L++ Y GSL L +R G ++LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 440 IALGTARGIAFIHSEG-----GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA 494
+ +G A+ S+G H ++ + N+L+ + ISD GL+ + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 495 TRT------IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547
+ + + A E + +SDV+SFGVLL E++T G P + + +L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+ R + +E +M ++ L C + PD RP D+ + +E++
Sbjct: 267 TGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 372 TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA 431
++ + E+++ ++ I +H NV+ + Y +K + +++ + G LF L S
Sbjct: 57 SREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----- 110
Query: 432 LDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAH 486
L + G+ ++HS + H ++K N++L D N I D GLAH
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAH 166
Query: 487 LINFPTTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
I+F G + APE+ ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S T + +K L G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILN---GVY 128
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 341 VLGKGSYGSTYKAILEDGTT-------VVVKRLREVAATKREFEQQMEVVGTIGKHSNVV 393
VLGKGS+G + +D T V+ KR + K ++++++ + H N++
Sbjct: 57 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIM 113
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ ++ K +V G LF ++ R R A +I GI ++H
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIRQVLSGITYMH 167
Query: 453 SEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVT 506
K H ++K N+LL ++D N I D GL+ IG Y APEV
Sbjct: 168 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 224
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRWVR 550
+K DV+S GV+L +L+G P + D++ +LP+W +
Sbjct: 225 HG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 277
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S T + +K L G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILN---GVY 128
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFV 184
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 76
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A G+ +
Sbjct: 77 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNY 129
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 130 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 22/224 (9%)
Query: 326 YFNFDLEDLL-RASAEVLGKGSYGSTYKAILEDGTTVVVKRL--REVAATKREFEQQMEV 382
Y +D +D++ R + V+ + + +T V +RL ++ + ++ +
Sbjct: 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL 442
+ + H +++ + Y S +V+ M G LF L AL I
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMR 207
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TI 498
++F+H+ H ++K N+LL ++ +SD G + + P R T
Sbjct: 208 SLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLE-PGEKLRELCGTP 263
Query: 499 GYRAPEV-----TETRKASQKS-DVYSFGVLLLEMLTGKAPLQH 536
GY APE+ ET K D+++ GV+L +L G P H
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 34/230 (14%)
Query: 341 VLGKGSYGSTYKAILEDGTT---VVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
+LGKGS+G K +D T VK + + +A ++ + V + K H N++ +
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 396 RAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+V G LF ++ R R A +I GI ++H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVFSGITYMHKH 140
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTATRTIG---YRAPEVTET 508
H ++K N+LL C I D GL+ T IG Y APEV
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRW 548
+K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 37/212 (17%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVRAYY 399
LG G++G YKA ++ + + ++ + ++ E E M + + H N+V + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 400 YSKDEKLVVYSYMPAGSL---FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y ++ ++ + G++ + L R ++ + + T + ++H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDN-- 154
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYR----------APEV- 505
K H ++K+ N+L T D + ++D G++ TRTI R APEV
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVS------AKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 506 ----TETRKASQKSDVYSFGVLLLEMLTGKAP 533
++ R K+DV+S G+ L+EM + P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR--------G 447
+++++ +V+ ++ D +D ++ I L + G
Sbjct: 70 LDVIHTENKLYLVFEFL------------SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 448 IAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAP 503
+AF HS + H ++K N+L+ + ++D GLA P T+ YRAP
Sbjct: 118 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 504 EV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
E+ + S D++S G + EM+T +A
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 363 VKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLH 422
V+ LRE AT +E ++++ + H N++ ++ Y + +V+ M G LF L
Sbjct: 63 VQELRE--ATLKE----VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT 116
Query: 423 RNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482
L KI I +H H ++K N+LL D+N ++D
Sbjct: 117 EK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDF 168
Query: 483 GLAHLINFPTTATRTI----GYRAPEVTETRK------ASQKSDVYSFGVLLLEMLTGKA 532
G + ++ P R++ Y APE+ E ++ D++S GV++ +L G
Sbjct: 169 GFSCQLD-PGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
Query: 533 PLQH 536
P H
Sbjct: 228 PFWH 231
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S T + +K L G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILN---GVY 128
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 363 VKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLH 422
V+ LRE AT +E ++++ + H N++ ++ Y + +V+ M G LF L
Sbjct: 50 VQELRE--ATLKE----VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT 103
Query: 423 RNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482
L KI I +H H ++K N+LL D+N ++D
Sbjct: 104 EK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDF 155
Query: 483 GLAHLINFPTTATRTI----GYRAPEVTETRK------ASQKSDVYSFGVLLLEMLTGKA 532
G + ++ P R + Y APE+ E ++ D++S GV++ +L G
Sbjct: 156 GFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
Query: 533 PLQH 536
P H
Sbjct: 215 PFWH 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVR 396
LGKG+YG +K+I G V VK++ + +R F + M ++ + H N+V +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIM-ILTELSGHENIVNLL 75
Query: 397 AYYYSKDEKLV--VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ +++ V V+ YM L ++ N L+ + + + I ++HS
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI--------NFP--------------- 491
G H ++K SN+LL + + ++D GL+ N P
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 492 --TTATRTIGYRAPEV-TETRKASQKSDVYSFGVLLLEMLTGK 531
T T YRAPE+ + K ++ D++S G +L E+L GK
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 34/230 (14%)
Query: 341 VLGKGSYGSTYKAILEDGTT---VVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVPV 395
+LGKGS+G K +D T VK + + +A ++ + V + K H N++ +
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 396 RAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+V G LF ++ R R A +I GI ++H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVFSGITYMHKH 140
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTATRTIG---YRAPEVTET 508
H ++K N+LL C I D GL+ T IG Y APEV
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRW 548
+K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPTTATRTI 498
RG+ +IHS A H ++K SN+LL + I D GLA + + F T
Sbjct: 140 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 499 GYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGK 531
YRAPE+ K KS D++S G +L EML+ +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLR-----EVAATKREFE-------QQMEVVGTIGK 388
+G G+YGS AI G V +K+L E+ A + E Q V+G +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
+ +R +Y Y MP FM + G + +G+
Sbjct: 110 FTPASSLRNFY-------DFYLVMP----FMQTDLQKI-MGMEFSEEKIQYLVYQMLKGL 157
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTE 507
+IHS G H ++K N+ + +D I D GLA + T T YRAPEV
Sbjct: 158 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVIL 214
Query: 508 T-RKASQKSDVYSFGVLLLEMLTGK 531
+ +Q D++S G ++ EMLTGK
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLR-----EVAATKREFE-------QQMEVVGTIGK 388
+G G+YGS AI G V +K+L E+ A + E Q V+G +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
+ +R +Y Y MP FM + G + +G+
Sbjct: 92 FTPASSLRNFY-------DFYLVMP----FMQTDLQKI-MGLKFSEEKIQYLVYQMLKGL 139
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTE 507
+IHS G H ++K N+ + +D I D GLA + T T YRAPEV
Sbjct: 140 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVIL 196
Query: 508 T-RKASQKSDVYSFGVLLLEMLTGK 531
+ +Q D++S G ++ EMLTGK
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 37/220 (16%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREF--EQQMEVVGTIGK--HSNVVP 394
+ LG+G +G ++A + D +KR+R RE E+ M V + K H +V
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIR---LPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSD-------GGTALDWNSR---MKIALGT 444
+ K+ + P L++ + R + G ++ R + I L
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-----------FPTT 493
A + F+HS+G H ++K SN+ T D + D GL ++ P
Sbjct: 128 AEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 494 ATRT--IG---YRAPEVTETRKASQKSDVYSFGVLLLEML 528
A T +G Y +PE S K D++S G++L E+L
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPE 504
RG+ +IHS G H ++K SNV + +D I D GLA + T T YRAPE
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 505 VT-ETRKASQKSDVYSFGVLLLEMLTGKA 532
+ +Q D++S G ++ E+L GKA
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 342 LGKGSYGSTYKAILEDGTT---VVVKRL----REVAATKREFEQQMEVVGTIGKHSNVVP 394
+G G+YG+ A+ DG T V +K+L + KR + +++ ++ + +H NV+
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHM-RHENVIG 88
Query: 395 VRAYYYSKDEKLV----VYSYMP-AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
+ + + DE L Y MP G+ L ++ G + + + +G+
Sbjct: 89 LLDVF-TPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLR 142
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVT-E 507
+IH+ G H ++K N+ + +D I D GLA + T YRAPEV
Sbjct: 143 YIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILN 199
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
+ +Q D++S G ++ EM+TGK + S H D
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPE 504
RG+ +IHS G H ++K SNV + +D I D GLA + T T YRAPE
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 505 VT-ETRKASQKSDVYSFGVLLLEMLTGKA 532
+ +Q D++S G ++ E+L GKA
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 31/211 (14%)
Query: 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSNVVP 394
E +G+G+YG YKA + G V +K++R T+ + + + + H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-------- 446
+ +++++ L+++ D +D ++ I L +
Sbjct: 70 LLDVIHTENK------------LYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
G+AF HS + H ++K N+L+ + ++D GLA P T+ YRA
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKA 532
PE+ + S D++S G + EM+T +A
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARG 447
H N++ + + K +V + G LF +++R++ D D + MK L G
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD---ECDAANIMKQILS---G 158
Query: 448 IAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLINFPTTATRTIG---YR 501
I ++H H +IK N+LL LN I D GL+ + +G Y
Sbjct: 159 ICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
APEV + +K ++K DV+S GV++ +L G P D++
Sbjct: 216 APEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 338 SAEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKH 389
+ E LG G + K L+ + KR + + ++ + E+++ ++ I +H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
NV+ + Y +K + +++ + G LF L S L + G+
Sbjct: 74 PNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVY 128
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATRTIG---YR 501
++HS + H ++K N++L D N I D GLAH I+F G +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APE+ ++D++S GV+ +L+G +P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 342 LGKGSYGSTYKAILE-----DGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVVP 394
LG+G +G + G V VK L+ + + ++++E++ + H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVK 75
Query: 395 VRAYYYSKDEKLV--VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + + ++P+GSL L +N++ ++ ++K A+ +G+ ++
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYL- 130
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IGYRAPEV 505
G ++ H ++ + NVL+ + I D GL I + + APE
Sbjct: 131 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
K SDV+SFGV L E+LT
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 37/234 (15%)
Query: 341 VLGKGSYGSTYKAILEDGTT-------VVVKRLREVAATKREFEQQMEVVGTIGKHSNVV 393
VLGKGS+G + +D T V+ KR + K ++++++ + H N+
Sbjct: 33 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIX 89
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ ++ K +V G LF ++ R R A +I GI + H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIRQVLSGITYXH 143
Query: 453 SEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVT 506
K H ++K N+LL ++D N I D GL+ IG Y APEV
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL 200
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRWVR 550
+K DV+S GV+L +L+G P + D++ +LP+W +
Sbjct: 201 HG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 253
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 342 LGKGSYGSTYKAILE-----DGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVVP 394
LG+G +G + G V VK L+ + + ++++E++ + H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVK 87
Query: 395 VRAYYYSKDEKLV--VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + + ++P+GSL L +N++ ++ ++K A+ +G+ ++
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYL- 142
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-------IGYRAPEV 505
G ++ H ++ + NVL+ + I D GL I + + APE
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 506 TETRKASQKSDVYSFGVLLLEMLT 529
K SDV+SFGV L E+LT
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 363 VKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLH 422
V+ LRE AT +E ++++ + H N++ ++ Y + +V+ M G LF L
Sbjct: 63 VQELRE--ATLKE----VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT 116
Query: 423 RNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482
L KI I +H H ++K N+LL D+N ++D
Sbjct: 117 EK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDF 168
Query: 483 GLAHLINFPTTATRTI----GYRAPEVTETRK------ASQKSDVYSFGVLLLEMLTGKA 532
G + ++ P R + Y APE+ E ++ D++S GV++ +L G
Sbjct: 169 GFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
Query: 533 PLQH 536
P H
Sbjct: 228 PFWH 231
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 340 EVLGKGSYG----STYKAILEDGTTVVVKRLREVAATKRE----FEQQMEVVGTIGKHSN 391
E LG GS+G + A +V VK L+ ++ E F +++ + ++ H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRN 72
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + + K+V P GSL L R R G L + + A+ A G+ ++
Sbjct: 73 LIRLYGVVLTPPMKMVT-ELAPLGSL---LDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL 127
Query: 452 HSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLI-----NFPTTATRTI--GYRAP 503
S+ +F H ++ + N+LL T+DL I D GL + ++ R + + AP
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVK-IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
E +TR S SD + FGV L EM T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 83
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 84 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 136
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D G A L+ G + P E
Sbjct: 137 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 340 EVLGKGSYG----STYKAILEDGTTVVVKRLREVAATKRE----FEQQMEVVGTIGKHSN 391
E LG GS+G + A +V VK L+ ++ E F +++ + ++ H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRN 72
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + + K+V P GSL L R R G L + + A+ A G+ ++
Sbjct: 73 LIRLYGVVLTPPMKMVT-ELAPLGSL---LDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL 127
Query: 452 HSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLI-----NFPTTATRTI--GYRAP 503
S+ +F H ++ + N+LL T+DL I D GL + ++ R + + AP
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVK-IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
E +TR S SD + FGV L EM T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 81
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 82 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 134
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D G A L+ G + P E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT 529
R + +SDV+S+GV + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ AS+ SD+++ G ++ +++ G P +
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 340 EVLGKGSYG----STYKAILEDGTTVVVKRLREVAATKRE----FEQQMEVVGTIGKHSN 391
E LG GS+G + A +V VK L+ ++ E F +++ + ++ H N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRN 76
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + + K+V P GSL L R R G L + + A+ A G+ ++
Sbjct: 77 LIRLYGVVLTPPMKMVT-ELAPLGSL---LDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL 131
Query: 452 HSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLI-----NFPTTATRTI--GYRAP 503
S+ +F H ++ + N+LL T+DL I D GL + ++ R + + AP
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVK-IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
E +TR S SD + FGV L EM T G+ P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E LG G++G ++ G K + + +E ++ ++ +H +V +
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+ +E +++Y +M G LF + +D + + ++ +G+ +H
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHENN--- 169
Query: 459 FTHGNIKSSNVLLTQDLNGCIS--DVGL-AHLINFPTT--ATRTIGYRAPEVTETRKASQ 513
+ H ++K N++ T + + D GL AHL + T T + APEV E +
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGY 229
Query: 514 KSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+D++S GVL +L+G +P D+ +
Sbjct: 230 YTDMWSVGVLSYILLSGLSPFGGENDDETL 259
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
E LG G++G ++ G K + + +E ++ ++ +H +V +
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+ +E +++Y +M G LF + +D + + ++ +G+ +H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHENN--- 275
Query: 459 FTHGNIKSSNVLLTQDLNGCIS--DVGLAHLINFPTTATRTIG---YRAPEVTETRKASQ 513
+ H ++K N++ T + + D GL ++ + T G + APEV E +
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGY 335
Query: 514 KSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
+D++S GVL +L+G +P D+ +
Sbjct: 336 YTDMWSVGVLSYILLSGLSPFGGENDDETL 365
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 81
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 82 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 134
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D G A L+ G + P E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 20/217 (9%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTI 386
+ + D + S +VLG G G + G +K L + ++E + + G
Sbjct: 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASG-- 80
Query: 387 GKHSNVVPVRAYY----YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL 442
G H +V + Y + K L++ M G LF R + G A +I
Sbjct: 81 GPH--IVCILDVYENMHHGKRCLLIIMECMEGGELF---SRIQERGDQAFTEREAAEIMR 135
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLI--NFPTTATRT 497
I F+HS A H ++K N+L T +D ++D G A N T T
Sbjct: 136 DIGTAIQFLHSHNIA---HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 192
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
Y APEV K + D++S GV++ +L G P
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 18/216 (8%)
Query: 328 NFDLEDLLRASAEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTI 386
+ + D + S +VLG G G + G +K L + ++E + + G
Sbjct: 4 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASG-- 61
Query: 387 GKHSNVVPVRAY---YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALG 443
G H V + Y ++ K L++ M G LF R + G A +I
Sbjct: 62 GPHI-VCILDVYENMHHGKRCLLIIMECMEGGELF---SRIQERGDQAFTEREAAEIMRD 117
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLI--NFPTTATRTI 498
I F+HS A H ++K N+L T +D ++D G A N T T
Sbjct: 118 IGTAIQFLHSHNIA---HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTP 174
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
Y APEV K + D++S GV++ +L G P
Sbjct: 175 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--------- 388
+ LG G++G + G V VK L R+ + ++VVG I +
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKIL------NRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
H +++ + + + +V Y+ G LF + ++ G + +R ++ +
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH----GRVEEMEAR-RLFQQILSAV 124
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN---FPTTATRTIGYRAPEV 505
+ H H ++K NVLL +N I+D GL+++++ F T+ + Y APEV
Sbjct: 125 DYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV 181
Query: 506 TETR-KASQKSDVYSFGVLLLEMLTGKAPL 534
R A + D++S GV+L +L G P
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 340 EVLGKGSYG----STYKAILEDGTTVVVKRLREVAATKRE----FEQQMEVVGTIGKHSN 391
E LG GS+G + A +V VK L+ ++ E F +++ + ++ H N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRN 76
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + + K+V P GSL L R R G L + + A+ A G+ ++
Sbjct: 77 LIRLYGVVLTPPMKMVT-ELAPLGSL---LDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL 131
Query: 452 HSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLI-----NFPTTATRTI--GYRAP 503
S+ +F H ++ + N+LL T+DL I D GL + ++ R + + AP
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVK-IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
E +TR S SD + FGV L EM T G+ P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VL G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 86
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L++ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 87 CRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 139
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 140 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 317 NKLCFLDGSYFNFDLE-DLLRASAE---VLGKGSYG----STYKAILEDGTT--VVVKRL 366
N+ ++D + +DL+ + R + E VLG G++G +T I + G + V VK L
Sbjct: 24 NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML 83
Query: 367 REVA-ATKRE-FEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRN 424
+E A +++RE +++++ +G H N+V + +++ Y G L L
Sbjct: 84 KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 425 RS------------------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
R + L + + A A+G+ F+ + H ++ +
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAA 200
Query: 467 SNVLLTQDLNGCISDVGLAHLI----NFPT--TATRTIGYRAPEVTETRKASQKSDVYSF 520
NVL+T I D GLA I N+ A + + APE + KSDV+S+
Sbjct: 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260
Query: 521 GVLLLEMLT 529
G+LL E+ +
Sbjct: 261 GILLWEIFS 269
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 340 EVLGKGSYG----STYKAILEDGTTVVVKRLREVAATKRE----FEQQMEVVGTIGKHSN 391
E LG GS+G + A +V VK L+ ++ E F +++ + ++ H N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRN 82
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + + K+V P GSL L R R G L + + A+ A G+ ++
Sbjct: 83 LIRLYGVVLTPPMKMVT-ELAPLGSL---LDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL 137
Query: 452 HSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLI-----NFPTTATRTI--GYRAP 503
S+ +F H ++ + N+LL T+DL I D GL + ++ R + + AP
Sbjct: 138 ESK---RFIHRDLAARNLLLATRDLVK-IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
E +TR S SD + FGV L EM T G+ P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVRAYY 399
LG G++G YKA ++ + + ++ + ++ E E M + + H N+V + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 400 YSKDEKLVVYSYMPAGSL---FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y ++ ++ + G++ + L R ++ + + T + ++H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDN-- 154
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLA----HLINFPTTATRTIGYRAPEV-----TE 507
K H ++K+ N+L T D + ++D G++ I + T + APEV ++
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAP 533
R K+DV+S G+ L+EM + P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 335 LRASAE------VLGKGSYGSTYKAILEDGTTVV--VKRLREVAATKRE----FEQQMEV 382
LR AE V+G+G++G + + T V +K L + KR F ++ ++
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKL--VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKI 440
+ ++ V+ +Y +D++ +V YMP G L L+ A + + + +
Sbjct: 128 MAFA---NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 184
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-----TTAT 495
AL IHS G F H ++K N+LL + + ++D G +N TA
Sbjct: 185 ALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 496 RTIGYRAPEVTETRKAS----QKSDVYSFGVLLLEMLTGKAPL 534
T Y +PEV +++ ++ D +S GV L EML G P
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 335 LRASAE------VLGKGSYGSTYKAILEDGTTVV--VKRLREVAATKRE----FEQQMEV 382
LR AE V+G+G++G + + T V +K L + KR F ++ ++
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKL--VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKI 440
+ ++ V+ +Y +D++ +V YMP G L L+ A + + + +
Sbjct: 123 MAFA---NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 179
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-----TTAT 495
AL IHS G F H ++K N+LL + + ++D G +N TA
Sbjct: 180 ALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 496 RTIGYRAPEVTETRKAS----QKSDVYSFGVLLLEMLTGKAPL 534
T Y +PEV +++ ++ D +S GV L EML G P
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VL G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 79
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 80 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V + LRE + K +E + V+ ++ + +V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD-NPHV 113
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 114 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 166
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 167 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VL G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 86
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 87 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 139
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D GLA L+ G + P E
Sbjct: 140 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
+ ARG+ F+ S K H ++ + N+LL+++ I D GLA I R
Sbjct: 205 SFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVV 553
+ + APE + S KSDV+S+GVLL E+ + G +P D+ D +R
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE--DFCSRLR--- 316
Query: 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604
E ++ + E ++ QI L C + P RP+ ++V +
Sbjct: 317 -----------EGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 335 LRASAE------VLGKGSYGSTYKAILEDGTTVV--VKRLREVAATKRE----FEQQMEV 382
LR AE V+G+G++G + + T V +K L + KR F ++ ++
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 383 VGTIGKHSNVVPVRAYYYSKDEKL--VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKI 440
+ ++ V+ +Y +D++ +V YMP G L L+ A + + + +
Sbjct: 128 MAFA---NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 184
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-----TTAT 495
AL IHS G F H ++K N+LL + + ++D G +N TA
Sbjct: 185 ALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 496 RTIGYRAPEVTETRKAS----QKSDVYSFGVLLLEMLTGKAPL 534
T Y +PEV +++ ++ D +S GV L EML G P
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 79
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 80 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 132
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D G A L+ G + P E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
R + +SDV+S+GV + E++T G P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 81
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 82 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 134
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D G A L+ G + P E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT 529
R + +SDV+S+GV + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTV----VVKRLREVAATK--REFEQQMEVVGTIGKHSNV 392
+VLG G++G+ YK + + +G V +K LRE + K +E + V+ ++ + +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 86
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTA--LDWNSRMKIALGTARGIAF 450
+ + +L+ MP G L + ++ + G+ L+W + A+G+ +
Sbjct: 87 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNY 139
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAP------E 504
+ + H ++ + NVL+ + I+D G A L+ G + P E
Sbjct: 140 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 505 VTETRKASQKSDVYSFGVLLLEMLT 529
R + +SDV+S+GV + E++T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 32/207 (15%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+GS+G ++ +ED T +++V E+ M G +VP+
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS--PRIVPLYGAVRE 156
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA-RGIAFIHSEGGAKFT 460
+ + GSL L+ + G D R LG A G+ ++HS +
Sbjct: 157 GPWVNIFMELLEGGSLGQLV---KEQGCLPED---RALYYLGQALEGLEYLHSR---RIL 207
Query: 461 HGNIKSSNVLLTQD-LNGCISDVGLAHLIN-------------FPTTATRTIGYRAPEVT 506
HG++K+ NVLL+ D + + D G A + P T T + APEV
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET----HMAPEVV 263
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAP 533
R K DV+S ++L ML G P
Sbjct: 264 LGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 32/207 (15%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401
LG+GS+G ++ +ED T +++V E+ M G +VP+
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS--PRIVPLYGAVRE 137
Query: 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA-RGIAFIHSEGGAKFT 460
+ + GSL L+ + G D R LG A G+ ++HS +
Sbjct: 138 GPWVNIFMELLEGGSLGQLV---KEQGCLPED---RALYYLGQALEGLEYLHSR---RIL 188
Query: 461 HGNIKSSNVLLTQD-LNGCISDVGLAHLIN-------------FPTTATRTIGYRAPEVT 506
HG++K+ NVLL+ D + + D G A + P T T + APEV
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET----HMAPEVV 244
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAP 533
R K DV+S ++L ML G P
Sbjct: 245 LGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 48/222 (21%)
Query: 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP---- 394
++LG+GS+ TTV+ + L AT RE+ ++ I K N VP
Sbjct: 35 GKILGEGSFS----------TTVLAREL----ATSREYAIKILEKRHIIK-ENKVPYVTR 79
Query: 395 -------------VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMK 439
V+ Y+ + DEKL SY G L + + S T + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR--- 496
++ + ++H +G H ++K N+LL +D++ I+D G A +++ + R
Sbjct: 140 VS-----ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 497 ---TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
T Y +PE+ + A + SD+++ G ++ +++ G P +
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 125
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y +PE + S +SD
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+EM G+ P+
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 23/222 (10%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAATKREFEQQMEVVGTIG 387
DLLR V+G+GSY L+ VV K L + + V
Sbjct: 12 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS-DGGTALDWNSRMKIALGTAR 446
H +V + + + ++ V Y+ G L + R R A +++ + +AL
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN--- 124
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
++H G + ++K NVLL + + ++D G+ P T T Y A
Sbjct: 125 ---YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 178
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD 544
PE+ D ++ GVL+ EM+ G++P G D D
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 23/219 (10%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAATKREFEQQMEVVGTIG 387
DLLR V+G+GSY L+ VV K L + + V
Sbjct: 8 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS-DGGTALDWNSRMKIALGTAR 446
H +V + + + ++ V Y+ G L + R R A +++ + +AL
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN--- 120
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
++H G + ++K NVLL + + ++D G+ P T T Y A
Sbjct: 121 ---YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
PE+ D ++ GVL+ EM+ G++P G D
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 125
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y +PE + S +SD
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+EM G+ P+
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 125
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y +PE + S +SD
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+EM G+ P+
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 35/216 (16%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVVPVR 396
+G G+YGS + ++ G + VK+L + + KR + +++ ++ + KH NV+ +
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGL- 115
Query: 397 AYYYSKDEKLVVYSYMPAGSL------FMLLHRNRSD-----GGTALDWNSRMKIALGTA 445
L V++ PA SL +++ H +D L + +
Sbjct: 116 ---------LDVFT--PATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 164
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIGYRAPE 504
RG+ +IHS A H ++K SN+ + +D I D GLA H + T T YRAPE
Sbjct: 165 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 221
Query: 505 VT-ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
+ + D++S G ++ E+LTG+ + H
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDH 257
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 22/229 (9%)
Query: 326 YFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATK-----REFEQQM 380
YF ++DL + LG G++G + ++E+ ++ + + ++ + + + E ++
Sbjct: 15 YFQGTIDDLFIFKRK-LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEI 71
Query: 381 EVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKI 440
EV+ ++ H N++ + + +V G L + ++ G AL ++
Sbjct: 72 EVLKSLD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG-KALSEGYVAEL 129
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC----ISDVGLAHLI---NFPTT 493
+A+ HS+ H ++K N+L QD + I D GLA L T
Sbjct: 130 MKQMMNALAYFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
A T Y APEV + R + K D++S GV++ +LTG P + ++V
Sbjct: 186 AAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV 233
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 125
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y +PE + S +SD
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+EM G+ P+
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVRAYY 399
LG G++G YKA ++ + + ++ + ++ E E M + + H N+V + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 400 YSKDEKLVVYSYMPAGSL---FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y ++ ++ + G++ + L R ++ + + T + ++H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDN-- 154
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYR----------APEV- 505
K H ++K+ N+L T D + ++D G++ TR I R APEV
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVS------AKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 506 ----TETRKASQKSDVYSFGVLLLEMLTGKAP 533
++ R K+DV+S G+ L+EM + P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 23/219 (10%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAATKREFEQQMEVVGTIG 387
DLLR V+G+GSY L+ VV K L + + V
Sbjct: 23 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS-DGGTALDWNSRMKIALGTAR 446
H +V + + + ++ V Y+ G L + R R A +++ + +AL
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN--- 135
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRA 502
++H G + ++K NVLL + + ++D G+ P T T Y A
Sbjct: 136 ---YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
PE+ D ++ GVL+ EM+ G++P G D
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 125
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y +PE + S +SD
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+EM G+ P+
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 127
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 128 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLPPFR 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 327 FNFDLEDLLRASAEVLGKGSYGSTYKAI-LEDGTTVVVKRL-REVAATKREFEQQMEVVG 384
F+ ED+ + +VLG+G++ I L VK + ++ + +++E++
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLY 65
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
H NV+ + ++ +D +V+ M GS+ +H+ R + +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH-----FNELEASVVVQDV 120
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQ------------DLNGCISDVGLAHLINFPT 492
A + F+H++G A H ++K N+L DL I G I+ P
Sbjct: 121 ASALDFLHNKGIA---HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 493 --TATRTIGYRAPEVTE--TRKAS---QKSDVYSFGVLLLEMLTGKAPL 534
T + Y APEV E + +AS ++ D++S GV+L +L+G P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 126
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 127 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLPPFR 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 125
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 126 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFR 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 124
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 125 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPPFR 210
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 30/208 (14%)
Query: 342 LGKGSYGSTYKAILEDGTTVV---VKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVR 396
LG G+YG + D T V +K +R+ + + + +E V + H N++ +
Sbjct: 45 LGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 397 AYYYSKDEKLVVYSYMPAGSLF-MLLHR---NRSDGGTALDWNSRMKIALGTARGIAFIH 452
++ K +V G LF ++HR N D I G+ ++H
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---------IIKQVLSGVTYLH 153
Query: 453 SEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVT 506
H ++K N+LL +D I D GL+ + +G Y APEV
Sbjct: 154 KHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL 210
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPL 534
+K +K DV+S GV+L +L G P
Sbjct: 211 R-KKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 22 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 80
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 81 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 131
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 132 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 188
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 189 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 99
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 152
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y +PE + S +SD
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 212
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+EM G+ P+
Sbjct: 213 IWSMGLSLVEMAVGRYPI 230
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 332 EDLLRASAEVLGKGSYGSTYKAILED--------GTTVVVKRLREVAATKREFEQQMEVV 383
EDL+ E LG+G++ +K + + T V++K L + A + E E
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK--AHRNYSESFFEAA 63
Query: 384 GTIGK--HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIA 441
+ K H ++V + DE ++V ++ GSL L +N++ + W ++++A
Sbjct: 64 SMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKN--CINILW--KLEVA 119
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC--------ISDVGLAHLINFPTT 493
A + F+ HGN+ + N+LL ++ + +SD G++ +
Sbjct: 120 KQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 494 ATRTIGYRAPEVTETRK-ASQKSDVYSFGVLLLEMLTG-KAPLQHSGHDDVVDLPRWVRS 551
I + PE E K + +D +SFG L E+ +G PL +D R
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS------ALDSQR---- 226
Query: 552 VVREEWTAEVFDVELLKYQDVEE----EMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607
+L Y+D + + ++ + +C+ PD RP ++R + +
Sbjct: 227 -------------KLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
Query: 608 QQPELRNRAS 617
P+L R S
Sbjct: 274 FTPDLVPRGS 283
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 23 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 81
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 82 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 132
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 133 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 189
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 190 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 229
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 21 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 79
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 80 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 130
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 131 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 187
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 188 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 150
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 332 EDLLRASAEVLGKGSYGSTYKAIL---EDGTTVVVKRLREVAATKREFEQQMEVVGTIGK 388
++LL A E LG G++GS + + + V +K L++ K + E+ M + +
Sbjct: 335 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ-GTEKADTEEMMREAQIMHQ 392
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
N VR + E L++ M G LH+ + ++ ++ + G+
Sbjct: 393 LDNPYIVRLIGVCQAEALMLVMEMAGGGP---LHKFLVGKREEIPVSNVAELLHQVSMGM 449
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT--ATRTIG-----YR 501
++ + F H N+ + NVLL ISD GL+ + + R+ G +
Sbjct: 450 KYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQ 535
APE RK S +SDV+S+GV + E L+ G+ P +
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 134
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 187
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y +PE + S +SD
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 247
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+EM G+ P+
Sbjct: 248 IWSMGLSLVEMAVGRYPI 265
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 131
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 132 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPPFR 217
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 100 VKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 154
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 155 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPPFR 240
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 17 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 75
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 76 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 126
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 127 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 183
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 147
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 161
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 162 EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
Query: 543 V 543
+
Sbjct: 222 I 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 147
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 150
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 30/212 (14%)
Query: 340 EVLGKGSYGST----YKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPV 395
+V+G+G++G +KA + ++ + + + F + + VV +
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
+ +V YMP G L L+ A + + + +AL IHS G
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA------IHSMG 194
Query: 456 GAKFTHGNIKSSNVLLTQ-------DLNGC--ISDVGLAHLINFPTTATRTIGYRAPEVT 506
H ++K N+LL + D C + + G+ H TA T Y +PEV
Sbjct: 195 ---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC----DTAVGTPDYISPEVL 247
Query: 507 ETRKAS----QKSDVYSFGVLLLEMLTGKAPL 534
+++ ++ D +S GV L EML G P
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 327 FNFDLEDLLRASAEVLGKGSYGSTYKAI-LEDGTTVVVKRL-REVAATKREFEQQMEVVG 384
F+ ED+ + +VLG+G++ I L VK + ++ + +++E++
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLY 65
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
H NV+ + ++ +D +V+ M GS+ +H+ R + +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH-----FNELEASVVVQDV 120
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQ------------------DLNGCISDVGLAH 486
A + F+H++G A H ++K N+L LNG S +
Sbjct: 121 ASALDFLHNKGIA---HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 487 LINFPTTATRTIGYRAPEVTE--TRKAS---QKSDVYSFGVLLLEMLTGKAPL 534
L+ T + Y APEV E + +AS ++ D++S GV+L +L+G P
Sbjct: 178 LL----TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 152
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 153 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPPFR 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 147
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ RG+A++ + +
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYLREK--HQ 135
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y APE + S +SD
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSD 195
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+E+ G+ P+
Sbjct: 196 IWSMGLSLVELAVGRYPI 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 16 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 74
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 75 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 125
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 126 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 182
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 183 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 222
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 146
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFR 232
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 15 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 73
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 74 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 124
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 125 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 181
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 146
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFR 232
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 61 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 119
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 120 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 170
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 171 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 267
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 91
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 92 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 144
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLIN-FPTTATRTIGYRAPEVTETRKASQKSD 516
H ++K SN+L+ + D G++ LI+ + T Y +PE + S +SD
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 204
Query: 517 VYSFGVLLLEMLTGKAPL 534
++S G+ L+EM G+ P+
Sbjct: 205 IWSMGLSLVEMAVGRYPI 222
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 31 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 89
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 90 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 140
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 141 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 197
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 198 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 237
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 395 VRAYY-YSKDEKLVV-YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
V+ Y+ + DEKL SY G L + + S T + + ++ + ++H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVT 506
+G H ++K N+LL +D++ I+D G A +++ + R T Y +PE+
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
+ A + SD+++ G ++ +++ G P +
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 340 EVLGKGSYG----STYKAILEDGTTVVVKRLREVAATKRE----FEQQMEVVGTIGKHSN 391
E LG GS+G + A +V VK L+ ++ E F +++ + ++ H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRN 72
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + + K+V P GSL L R R G L + + A+ A G+ ++
Sbjct: 73 LIRLYGVVLTPPMKMVT-ELAPLGSL---LDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL 127
Query: 452 HSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLI-----NFPTTATRTI--GYRAP 503
S+ +F H ++ + N+LL T+DL I D GL + + R + + AP
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVK-IGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
E +TR S SD + FGV L EM T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL--INF---PTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA NF P TR YR
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY--YR 190
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ E++ G Q + H D
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID 230
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 340 EVLGKGSYG----STYKAILEDGTTVVVKRLREVAATKRE----FEQQMEVVGTIGKHSN 391
E LG GS+G + A +V VK L+ ++ E F +++ + ++ H N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRN 82
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + + K+V P GSL L R R G L + + A+ A G+ ++
Sbjct: 83 LIRLYGVVLTPPMKMVT-ELAPLGSL---LDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL 137
Query: 452 HSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLINFPTTATRTI---------GYR 501
S+ +F H ++ + N+LL T+DL I D GL + P + +
Sbjct: 138 ESK---RFIHRDLAARNLLLATRDLVK-IGDFGLMRAL--PQNDDHXVMQEHRKVPFAWC 191
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAP 533
APE +TR S SD + FGV L EM T G+ P
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGK---HSNVVPV 395
E LGKG++ + + + G K + + R+F Q++E I + H N+V +
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 70
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFM-LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ +V+ + G LF ++ R A ++ IA+ HS
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------LESIAYCHSN 124
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA---TRTIGYRAPEVTET 508
G H N+K N+LL G ++D GLA +N T GY +PEV +
Sbjct: 125 G---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
S+ D+++ GV+L +L G P
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 104 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 158
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 218
Query: 543 V 543
+
Sbjct: 219 I 219
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 104/243 (42%), Gaps = 27/243 (11%)
Query: 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398
AE LG+G +G ++ + + + +V T + ++ + I +H N++ +
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL--GTARGIAFIHSEGG 456
+ S +E ++++ ++ +F + +A + N R ++ + F+HS
Sbjct: 70 FESMEELVMIFEFISGLDIFERI------NTSAFELNEREIVSYVHQVCEALQFLHSHN- 122
Query: 457 AKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI----NFPTTATRTIGYRAPEVTETRK 510
H +I+ N++ + I + G A + NF T Y APEV +
Sbjct: 123 --IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP-EYYAPEVHQHDV 179
Query: 511 ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570
S +D++S G L+ +L+G P + +++ +++ E+T FD E K
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE------NIMNAEYT---FDEEAFKEI 230
Query: 571 DVE 573
+E
Sbjct: 231 SIE 233
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 42/259 (16%)
Query: 337 ASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT-----KREFEQQMEVVGTIGKHSN 391
+ E+LG G +G +K + T +K ++ T K E + ++ V+ + H+N
Sbjct: 92 SKTEILGGGRFGQVHKC---EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD-HAN 147
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + + SK++ ++V Y+ G LF + + S T LD MK GI +
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRI-IDESYNLTELDTILFMK---QICEGIRHM 203
Query: 452 HSEGGAKFTHGNIKSSNVL-LTQDLNGC-ISDVGLAHL--------INFPTTATRTIGYR 501
H H ++K N+L + +D I D GLA +NF T +
Sbjct: 204 HQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPE-----FL 255
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561
APEV S +D++S GV+ +L+G +P G +D L +++ W
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL--GDNDAETL----NNILACRW---- 305
Query: 562 FDVELLKYQDVEEEMVQML 580
D+E ++QD+ EE + +
Sbjct: 306 -DLEDEEFQDISEEAKEFI 323
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 30/236 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLR-------EVAATKREFEQQMEVVGTIGKHSN 391
E +G+G+YG+ +KA E V +KR+R ++ RE E+ KH N
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKN 62
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+V + +S + +V+ + L + LD +G+ F
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTE 507
HS H ++K N+L+ ++ ++D GLA P + T+ YR P+V
Sbjct: 118 HSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 508 TRKASQKS-DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR---SVVREEWTA 559
K S D++S G + E+ PL G+D L R R + E+W +
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPL-FPGNDVDDQLKRIFRLLGTPTEEQWPS 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 161
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
Query: 543 V 543
+
Sbjct: 222 I 222
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 161
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
Query: 543 V 543
+
Sbjct: 222 I 222
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGK---HSNVVPV 395
E LGKG++ + + + G K + + R+F Q++E I + H N+V +
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 70
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFM-LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ +V+ + G LF ++ R A ++ IA+ HS
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------LESIAYCHSN 124
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA---TRTIGYRAPEVTET 508
G H N+K N+LL G ++D GLA +N T GY +PEV +
Sbjct: 125 G---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
S+ D+++ GV+L +L G P
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGK---HSNVVPV 395
E LGKG++ + + + G K + + R+F Q++E I + H N+V +
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 69
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFM-LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ +V+ + G LF ++ R A ++ IA+ HS
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------LESIAYCHSN 123
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA---TRTIGYRAPEVTET 508
G H N+K N+LL G ++D GLA +N T GY +PEV +
Sbjct: 124 G---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 180
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
S+ D+++ GV+L +L G P
Sbjct: 181 DPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 17 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 75
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 76 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 126
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 127 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 183
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 223
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 67 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 125
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 126 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 176
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 177 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 233
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 234 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 273
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 135 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 189
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 190 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 249
Query: 543 V 543
+
Sbjct: 250 I 250
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 109 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 163
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 164 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 223
Query: 543 V 543
+
Sbjct: 224 I 224
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 112 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 166
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 226
Query: 543 V 543
+
Sbjct: 227 I 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 110 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 164
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 165 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 224
Query: 543 V 543
+
Sbjct: 225 I 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK--------- 388
+ LG G++G + G V VK L R+ + ++VVG I +
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKIL------NRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
H +++ + + + +V Y+ G LF + ++ G + +R ++ +
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH----GRVEEMEAR-RLFQQILSAV 124
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN---FPTTATRTIGYRAPEV 505
+ H H ++K NVLL +N I+D GL+++++ F + + Y APEV
Sbjct: 125 DYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV 181
Query: 506 TETR-KASQKSDVYSFGVLLLEMLTGKAPL 534
R A + D++S GV+L +L G P
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 341 VLGKGSYGSTYKAILE----DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVP 394
+LG+G +G Y+ + + V VK ++ K +F + ++ + H ++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVK 73
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ ++ ++ P G L L RN++ +L + + +L + +A++ S
Sbjct: 74 LIGII-EEEPTWIIMELYPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLES- 127
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----FPTTATRT-IGYRAPEVTETR 509
H +I N+L+ + D GL+ I + + TR I + +PE R
Sbjct: 128 --INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
+ + SDV+ F V + E+L+ GK P + DV+
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGK---HSNVVPV 395
E LGKG++ + + + G K + + R+F Q++E I + H N+V +
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 93
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR---GIAFIH 452
+ +V+ + G LF + A ++ S + + IA+ H
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDI--------VAREFYSEADASHCIQQILESIAYCH 145
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA---TRTIGYRAPEVT 506
S G H N+K N+LL G ++D GLA +N T GY +PEV
Sbjct: 146 SNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 202
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPL 534
+ S+ D+++ GV+L +L G P
Sbjct: 203 KKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 342 LGKGSYGSTYKAILED---GTTVVVKRL----REVAATKREFEQQMEVVGTIGKHSNVVP 394
LG G + Y A ED V +K + RE T + FE+++ + H N+V
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIVS 75
Query: 395 VRAYYYSKDEKLVVYSYM--PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ D +V Y+ P S ++ H S TA+++ +++ GI H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLS-VDTAINFTNQI------LDGIKHAH 128
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT------IGYRAPEVT 506
+ H +IK N+L+ + I D G+A ++ T+ T+T + Y +PE
Sbjct: 129 D---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQA 184
Query: 507 ETRKASQKSDVYSFGVLLLEMLTGKAPL 534
+ + +D+YS G++L EML G+ P
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLI 488
+LD S + A + +A++ S+ +F H +I + NVL++ N C+ D GL+ +
Sbjct: 487 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS--NDCVKLGDFGLSRYM 541
Query: 489 NFPTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDV 542
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 601
Query: 543 V 543
+
Sbjct: 602 I 602
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 341 VLGKGSYGSTYKAILE----DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVP 394
+LG+G +G Y+ + + V VK ++ K +F + ++ + H ++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVK 89
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ ++ ++ P G L L RN++ +L + + +L + +A++ S
Sbjct: 90 LIGII-EEEPTWIIMELYPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLES- 143
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----FPTTATRT-IGYRAPEVTETR 509
H +I N+L+ + D GL+ I + + TR I + +PE R
Sbjct: 144 --INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
+ + SDV+ F V + E+L+ GK P + DV+
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 331 LEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KH 389
+EDL +G+G+YG YKA +DG L+++ T E+ KH
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 390 SNVVPVRAYYYSK-DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
NV+ ++ + S D K+ + L+ ++ +R+ +++ G + +
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN----KKPVQLPRGMVKSL 133
Query: 449 AF-----IHSEGGAKFTHGNIKSSNVLLT----QDLNGCISDVGLAHLINFPTT------ 493
+ IH H ++K +N+L+ + I+D+G A L N P
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193
Query: 494 -ATRTIGYRAPE-VTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
T YRAPE + R ++ D+++ G + E+LT + P+ H +D+
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQEDI 243
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 332 EDLLRASAEVLGKGSYGSTYKAIL---EDGTTVVVKRLREVAATKREFEQQMEVVGTIGK 388
++LL A E LG G++GS + + + V +K L++ K + E+ M + +
Sbjct: 9 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ-GTEKADTEEMMREAQIMHQ 66
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
N VR + E L++ M G LH+ + ++ ++ + G+
Sbjct: 67 LDNPYIVRLIGVCQAEALMLVMEMAGGGP---LHKFLVGKREEIPVSNVAELLHQVSMGM 123
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT--ATRTIG-----YR 501
++ + F H ++ + NVLL ISD GL+ + + R+ G +
Sbjct: 124 KYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQ 535
APE RK S +SDV+S+GV + E L+ G+ P +
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH--LINF---PTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA NF P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ E++ G Q + H D
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHID 232
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S GV++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHID 232
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAY 398
LG G+ G +K + V+ ++L + A + + ++++V+ +V
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 75
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+YS E + +M GSL +L + L K+++ +G+ ++ + K
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK--HK 128
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLA-HLINFPTTATRTIG---YRAPEVTETRKASQK 514
H ++K SN+L+ + D G++ LI+ A +G Y +PE + S +
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--EMANEFVGTRSYMSPERLQGTHYSVQ 186
Query: 515 SDVYSFGVLLLEMLTGKAP 533
SD++S G+ L+EM G+ P
Sbjct: 187 SDIWSMGLSLVEMAVGRYP 205
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S GV++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHID 232
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 341 VLGKGSYGSTYKAILE----DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVP 394
+LG+G +G Y+ + + V VK ++ K +F + ++ + H ++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVK 77
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
+ ++ ++ P G L L RN++ +L + + +L + +A++ S
Sbjct: 78 LIGII-EEEPTWIIMELYPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLES- 131
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----FPTTATRT-IGYRAPEVTETR 509
H +I N+L+ + D GL+ I + + TR I + +PE R
Sbjct: 132 --INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
+ + SDV+ F V + E+L+ GK P + DV+
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 340 EVLGK-GSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVR 396
E++G+ G +G YKA ++ + + ++ + ++ E E M + + H N+V +
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 397 AYYYSKDEKLVVYSYMPAGSL---FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+Y ++ ++ + G++ + L R ++ + + T + ++H
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHD 126
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEV-- 505
K H ++K+ N+L T D + ++D G++ N T R T + APEV
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 506 ---TETRKASQKSDVYSFGVLLLEMLTGKAP 533
++ R K+DV+S G+ L+EM + P
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKRE--FEQQMEVVGTIGKHSNVVPVR 396
E LG G++ A + G VK + + A +E E ++ V+ I KH N+V +
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI-KHENIVALE 86
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG-GTALDWNSRMKIALGTARGIAFIHSEG 455
Y S + +V + G LF R G T D ++ ++ L + ++H G
Sbjct: 87 DIYESPNHLYLVMQLVSGGELF---DRIVEKGFYTEKDASTLIRQVLD---AVYYLHRMG 140
Query: 456 GAKFTHGNIKSSNVLL-TQDLNG--CISDVGLAHLI---NFPTTATRTIGYRAPEVTETR 509
H ++K N+L +QD ISD GL+ + + +TA T GY APEV +
Sbjct: 141 ---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQK 197
Query: 510 KASQKSDVYSFGVLLLEMLTGKAPL 534
S+ D +S GV+ +L G P
Sbjct: 198 PYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 341 VLGKGSYGSTYKAILED-GTTVVVKRL--REVAATKREF----EQQMEVVGTIGKHSNVV 393
++G+G +G Y D G +K L + + + E E+ M + + G +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ +++ D+ + M G L H + S G + + R A G+ +H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRF-YAAEIILGLEHMHN 310
Query: 454 EGGAKFT-HGNIKSSNVLLTQDLNGCISDVGLAHLINF----PTTATRTIGYRAPEVTET 508
+F + ++K +N+LL + + ISD+GLA +F P + T GY APEV +
Sbjct: 311 ----RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 509 RKASQKS-DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR 547
A S D +S G +L ++L G +P + D ++ R
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 341 VLGKGSYGSTYKAILED-GTTVVVKRL--REVAATKREF----EQQMEVVGTIGKHSNVV 393
++G+G +G Y D G +K L + + + E E+ M + + G +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ +++ D+ + M G L H + S G + + R A G+ +H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRF-YAAEIILGLEHMHN 310
Query: 454 EGGAKFT-HGNIKSSNVLLTQDLNGCISDVGLAHLINF----PTTATRTIGYRAPEVTET 508
+F + ++K +N+LL + + ISD+GLA +F P + T GY APEV +
Sbjct: 311 ----RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 509 RKASQKS-DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR 547
A S D +S G +L ++L G +P + D ++ R
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPYR 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPYR 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKPYR 222
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPYR 210
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 341 VLGKGSYGSTYKAILED-GTTVVVKRL--REVAATKREF----EQQMEVVGTIGKHSNVV 393
++G+G +G Y D G +K L + + + E E+ M + + G +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ +++ D+ + M G L H + S G + + R A G+ +H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRF-YAAEIILGLEHMHN 310
Query: 454 EGGAKFT-HGNIKSSNVLLTQDLNGCISDVGLAHLINF----PTTATRTIGYRAPEVTET 508
+F + ++K +N+LL + + ISD+GLA +F P + T GY APEV +
Sbjct: 311 ----RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 509 RKASQKS-DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR 547
A S D +S G +L ++L G +P + D ++ R
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 341 VLGKGSYGSTYKAILED-GTTVVVKRL--REVAATKREF----EQQMEVVGTIGKHSNVV 393
++G+G +G Y D G +K L + + + E E+ M + + G +V
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ +++ D+ + M G L H + S G + + R A G+ +H+
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRF-YAAEIILGLEHMHN 309
Query: 454 EGGAKFT-HGNIKSSNVLLTQDLNGCISDVGLAHLINF----PTTATRTIGYRAPEVTET 508
+F + ++K +N+LL + + ISD+GLA +F P + T GY APEV +
Sbjct: 310 ----RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQK 363
Query: 509 RKASQKS-DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR 547
A S D +S G +L ++L G +P + D ++ R
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 403
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 123/298 (41%), Gaps = 48/298 (16%)
Query: 340 EVLGKGSYGSTYKAILED--------GTTVVVKRLREVAATKREFEQQMEVVGTIGK--H 389
E LG+G++ +K + + T V++K L + A + E E + K H
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK--AHRNYSESFFEAASMMSKLSH 71
Query: 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449
++V DE ++V ++ GSL L +N++ + W ++++A A +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN--CINILW--KLEVAKQLAAAMH 127
Query: 450 FIHSEGGAKFTHGNIKSSNVLLTQDLNGC--------ISDVGLAHLINFPTTATRTIGYR 501
F+ HGN+ + N+LL ++ + +SD G++ + I +
Sbjct: 128 FLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 502 APEVTETRK-ASQKSDVYSFGVLLLEMLTG-KAPLQHSGHDDVVDLPRWVRSVVREEWTA 559
PE E K + +D +SFG L E+ +G PL S + +
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL----------------SALDSQRKL 228
Query: 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRAS 617
+ ++ ++Q + ++ + +C+ PD RP ++R + + P+L R S
Sbjct: 229 QFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 41/221 (18%)
Query: 341 VLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
VLG+G++G KA D +K++R ++ ++ ++ H VV A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN-HQYVVRYYAAW 71
Query: 400 YS-------------KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446
K + Y G+L+ L+H + W +I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----E 127
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI------------NFP--- 491
+++IHS+G H ++K N+ + + N I D GLA + N P
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 492 ---TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEML 528
T+A T Y A EV + T ++K D+YS G++ EM+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 342 LGKGSYGSTYKAILED-GTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRA 397
+G+GSYG +K D G V +K+ E K+ +++ ++ + KH N+V +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLE 69
Query: 398 YYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGA 457
+ K +V+ Y L L +R G + I T + + F H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPE--HLVKSITWQTLQAVNFCHKHNC- 123
Query: 458 KFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT------TATRTIGYRAPE--VTETR 509
H ++K N+L+T+ + D G A L+ P+ ATR YR+PE V +T+
Sbjct: 124 --IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR--WYRSPELLVGDTQ 179
Query: 510 KASQKSDVYSFGVLLLEMLTG 530
DV++ G + E+L+G
Sbjct: 180 YGP-PVDVWAIGCVFAELLSG 199
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 61 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVR 119
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF + ++R D S + ++G
Sbjct: 120 IVDVYENL------YAGRKCLLIVXECLDGGELFSRI-QDRGDQAFTEREASEIXKSIGE 172
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
A I ++HS H ++K N+L T I +D G A N TT T
Sbjct: 173 A--IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D +S GV+ +L G P +S H
Sbjct: 228 YYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF-YSNH 267
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY--YR 194
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 234
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 333 DLLRASAEVLGKGSYGSTYKAILEDGT--TVVVKRLREVAATKREFE------QQMEVVG 384
D + +++VLG G G + I T +K L++ +RE E Q +V
Sbjct: 15 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 73
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGT 444
+ + N+ Y + L+V + G LF R + G A +I
Sbjct: 74 IVDVYENL------YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSI 124
Query: 445 ARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI---SDVGLAHLI---NFPTTATRTI 498
I ++HS H ++K N+L T I +D G A N T T
Sbjct: 125 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTP 181
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
Y APEV K + D++S GV++ +L G P +S H
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNH 221
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490
+LD S + A + +A++ S+ +F H +I + NVL++ + D GL+ +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 163
Query: 491 PTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV+
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-------NFPTTATRTIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + T + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKPYR 574
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 193
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 233
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTTATR---TIGYRAPEVTETR 509
+ F H ++ + NVLL ISD GL+ + N+ T + + APE
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 510 KASQKSDVYSFGVLLLEMLT-GKAPLQ 535
K S KSDV+SFGVL+ E + G+ P +
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKPYR 575
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 45/288 (15%)
Query: 321 FLDGSYFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATK------- 373
F + NFD ++LRA +GKGS+G I++ T + ++ + K
Sbjct: 6 FDENEDVNFDHFEILRA----IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEV 59
Query: 374 REFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALD 433
R ++++++ + +H +V + + +++ +V + G L L +N
Sbjct: 60 RNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET-- 116
Query: 434 WNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493
+ L + + + H ++K N+LL + + I+D +A ++ T
Sbjct: 117 ------VKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
Query: 494 ATRTIG---YRAPEVTETRKASQKS---DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR 547
T G Y APE+ +RK + S D +S GV E+L G+ P
Sbjct: 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH------------ 218
Query: 548 WVRSVVREEWTAEVFDVELLKYQDV-EEEMVQMLQIALSCVAKVPDSR 594
+RS + F+ ++ Y +EMV +L+ L PD R
Sbjct: 219 -IRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLE---PNPDQR 262
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 426 SDGGTALDW---NSRMKIALGTAR------GIAFIHSEGGAKF-THGNIKSSNVLLTQDL 475
+ GG D+ + RMK A+ + + H KF H ++K+ N+LL D+
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ----KFIVHRDLKAENLLLDADM 150
Query: 476 NGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGK 531
N I+D G ++ F G Y APE+ + +K + DV+S GV+L +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 532 APL 534
P
Sbjct: 211 LPF 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 431 ALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490
+LD S + A + +A++ S+ +F H +I + NVL++ + D GL+ +
Sbjct: 487 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
Query: 491 PTTATRTIG-----YRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVV 543
T + G + APE R+ + SDV+ FGV + E+L G P Q ++DV+
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 37/213 (17%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLR---EVAATKREFEQQMEVVGTIGKHSNVVPVRA 397
LG+G+YG YKAI TV +KR+R E +++ ++ + +H N++ +++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKS 100
Query: 398 YYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA------RGIAFI 451
+ +++ Y +D +D N + + + + G+ F
Sbjct: 101 VIHHNHRLHLIFEYA------------ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 452 HSEGGAKFTHGNIKSSNVLLT-QDLNGC----ISDVGLAHLINFP----TTATRTIGYRA 502
HS + H ++K N+LL+ D + I D GLA P T T+ YR
Sbjct: 149 HSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 503 PEV-TETRKASQKSDVYSFGVLLLEMLTGKAPL 534
PE+ +R S D++S + EML K PL
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLM-KTPL 237
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 30/236 (12%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLR-------EVAATKREFEQQMEVVGTIGKHSN 391
E +G+G+YG+ +KA E V +KR+R ++ RE E+ KH N
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKN 62
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+V + +S + +V+ + L + LD +G+ F
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTE 507
HS H ++K N+L+ ++ +++ GLA P + T+ YR P+V
Sbjct: 118 HSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 508 TRKASQKS-DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR---SVVREEWTA 559
K S D++S G + E+ PL G+D L R R + E+W +
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPL-FPGNDVDDQLKRIFRLLGTPTEEQWPS 229
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
+ ++K NVLL D N ISD+GLA + T T+ T G+ APE+ + D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 517 VYSFGVLLLEMLTGKAPLQHSGH 539
++ GV L EM+ + P + G
Sbjct: 372 YFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
+ ++K NVLL D N ISD+GLA + T T+ T G+ APE+ + D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 517 VYSFGVLLLEMLTGKAPLQHSGH 539
++ GV L EM+ + P + G
Sbjct: 372 YFALGVTLYEMIAARGPFRARGE 394
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
+ ++K NVLL D N ISD+GLA + T T+ T G+ APE+ + D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 517 VYSFGVLLLEMLTGKAPLQHSGH 539
++ GV L EM+ + P + G
Sbjct: 372 YFALGVTLYEMIAARGPFRARGE 394
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVTETRKASQKSD 516
+ ++K NVLL D N ISD+GLA + T T+ T G+ APE+ + D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 517 VYSFGVLLLEMLTGKAPLQHSGH 539
++ GV L EM+ + P + G
Sbjct: 372 YFALGVTLYEMIAARGPFRARGE 394
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541
APEV + D++S G ++ EM+ G + H D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 38/259 (14%)
Query: 299 GTAEKP-----KDFGSGVQEAEKNKLCFLDGSYFN--FDLEDLLRASAEVLGKGSYGSTY 351
G+AE P + + A KN L L F+ FD+ D E +G G+YG
Sbjct: 15 GSAEPPGPVKAEPAHTAASVAAKN-LALLKARSFDVTFDVGDEYEI-IETIGNGAYGVVS 72
Query: 352 KAILE-DGTTVVVKRLR---EVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407
A G V +K++ +V + ++++++ KH N++ + KD
Sbjct: 73 SARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAI------KDILRP 125
Query: 408 VYSYMPAGSLFMLLHRNRSD------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
Y S++++L SD L RG+ ++HS A+ H
Sbjct: 126 TVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIH 182
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLI--------NFPTTATRTIGYRAPEVT-ETRKAS 512
++K SN+L+ ++ I D G+A + F T T YRAPE+ + +
Sbjct: 183 RDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYT 242
Query: 513 QKSDVYSFGVLLLEMLTGK 531
Q D++S G + EML +
Sbjct: 243 QAIDLWSVGCIFGEMLARR 261
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 339 AEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHS 390
E LG G + K LE + KR + ++ E E+++ ++ + H
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHH 75
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
NV+ + Y ++ + +++ + G LF L + S + + S +K L G+ +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILD---GVNY 130
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCIS-----DVGLAHLINFPTTATRTIG---YRA 502
+H++ K H ++K N++L D N I D GLAH I G + A
Sbjct: 131 LHTK---KIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
PE+ ++D++S GV+ +L+G +P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 426 SDGGTALDW---NSRMKIALGTAR------GIAFIHSEGGAKF-THGNIKSSNVLLTQDL 475
+ GG D+ + RMK A+ + + H KF H ++K+ N+LL D+
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ----KFIVHRDLKAENLLLDADM 150
Query: 476 NGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGK 531
N I+D G ++ F G Y APE+ + +K + DV+S GV+L +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 532 APL 534
P
Sbjct: 211 LPF 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 339 AEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHS 390
E LG G + K LE + KR + ++ E E+++ ++ + H
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHH 75
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
NV+ + Y ++ + +++ + G LF L + S + + S +K L G+ +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILD---GVNY 130
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCIS-----DVGLAHLINFPTTATRTIG---YRA 502
+H++ K H ++K N++L D N I D GLAH I G + A
Sbjct: 131 LHTK---KIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
PE+ ++D++S GV+ +L+G +P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 117/281 (41%), Gaps = 56/281 (19%)
Query: 341 VLGKGSYGSTYKAI-LEDGTTVVVK-----RLREVAATKREFEQQMEV-----VGTIGKH 389
+LGKG +G+ + L D V +K R+ + +EV VG G H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 390 SNVVPVRAYYYSKDE-KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
V+ + ++ +++ LV+ +PA LF + ++ G + SR A I
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI----TEKGPLGEGPSRCFFGQVVA-AI 152
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLN-GC--ISDVGLAHLI-NFPTT---ATRTIGYR 501
HS G H +IK N+L+ DL GC + D G L+ + P T TR Y
Sbjct: 153 QHCHSRG---VVHRDIKDENILI--DLRRGCAKLIDFGSGALLHDEPYTDFDGTRV--YS 205
Query: 502 APE-VTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560
PE ++ + + + V+S G+LL +M+ G P + E
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD---------------------QE 244
Query: 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVV 601
+ + EL V + +++ C+A P SRP +++++
Sbjct: 245 ILEAELHFPAHVSPDCCALIR---RCLAPKPSSRPSLEEIL 282
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 48/249 (19%)
Query: 330 DLEDLLRASA--EVLGKGSYGSTYKAI-LEDGTTVVVKRLRE--VAATKREFEQQMEVVG 384
D ++LL+ E +G G + A + G V +K + + + + + ++E +
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 385 TIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNR-SDGGTALDWNSRMKIAL 442
+ +H ++ + + ++ +V Y P G LF ++ ++R S+ T + +
Sbjct: 64 NL-RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-------VFR 115
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA---------HLINFPTT 493
+A++HS+G + H ++K N+L + + D GL HL T
Sbjct: 116 QIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL----QT 168
Query: 494 ATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV--------- 543
++ Y APE+ + + ++DV+S G+LL ++ G P DD V
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD----DDNVMALYKKIMR 224
Query: 544 ---DLPRWV 549
D+P+W+
Sbjct: 225 GKYDVPKWL 233
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 426 SDGGTALDW---NSRMKIALGTAR------GIAFIHSEGGAKF-THGNIKSSNVLLTQDL 475
+ GG D+ + RMK A+ + + H KF H ++K+ N+LL D+
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ----KFIVHRDLKAENLLLDADM 150
Query: 476 NGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGK 531
N I+D G ++ F G Y APE+ + +K + DV+S GV+L +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 532 APL 534
P
Sbjct: 211 LPF 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 426 SDGGTALDW---NSRMKIALGTAR------GIAFIHSEGGAKF-THGNIKSSNVLLTQDL 475
+ GG D+ + RMK A+ + + H KF H ++K+ N+LL D+
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ----KFIVHRDLKAENLLLDADM 150
Query: 476 NGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGK 531
N I+D G ++ F G Y APE+ + +K + DV+S GV+L +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 532 APL 534
P
Sbjct: 211 LPF 213
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 339 AEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHS 390
E LG G + K LE + KR + ++ E E+++ ++ + H
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHH 75
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
NV+ + Y ++ + +++ + G LF L + S + + S +K L G+ +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILD---GVNY 130
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCIS-----DVGLAHLINFPTTATRTIG---YRA 502
+H++ K H ++K N++L D N I D GLAH I G + A
Sbjct: 131 LHTK---KIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
PE+ ++D++S GV+ +L+G +P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 339 AEVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHS 390
E LG G + K LE + KR + ++ E E+++ ++ + H
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHH 75
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
NV+ + Y ++ + +++ + G LF L + S + + S +K L G+ +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILD---GVNY 130
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCIS-----DVGLAHLINFPTTATRTIG---YRA 502
+H++ K H ++K N++L D N I D GLAH I G + A
Sbjct: 131 LHTK---KIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
PE+ ++D++S GV+ +L+G +P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 29/226 (12%)
Query: 326 YFNFDLEDLLRASAEVLGKGSYGSTYKAILEDGT-----TVVVKRLREVAA----TKREF 376
YF +ED E LG G + K + GT +K+ R ++ ++ E
Sbjct: 19 YFQSMVEDHYEMGEE-LGSGQFAIVRKC-RQKGTGKEYAAKFIKKRRLXSSRRGVSREEI 76
Query: 377 EQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNS 436
E+++ ++ I +H N++ + + +K + +++ + G LF L S L +
Sbjct: 77 EREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDE 130
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFP 491
+ G+ ++HS+ + H ++K N++L D N + D G+AH I
Sbjct: 131 ATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLL-DKNVPNPRIKLIDFGIAHKIEAG 186
Query: 492 TTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
G + APE+ ++D++S GV+ +L+G +P
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 340 EVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSN 391
E LG G + K LE + KR + ++ E E+++ ++ + H N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHN 76
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
V+ + Y ++ + +++ + G LF L + S + + S +K L G+ ++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILD---GVNYL 131
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCIS-----DVGLAHLINFPTTATRTIG---YRAP 503
H++ K H ++K N++L D N I D GLAH I G + AP
Sbjct: 132 HTK---KIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
E+ ++D++S GV+ +L+G +P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 426 SDGGTALDW---NSRMKIALGTAR------GIAFIHSEGGAKF-THGNIKSSNVLLTQDL 475
+ GG D+ + RMK A+ + + H KF H ++K+ N+LL D+
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ----KFIVHRDLKAENLLLDADM 150
Query: 476 NGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGK 531
N I+D G ++ F G Y APE+ + +K + DV+S GV+L +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 532 APL 534
P
Sbjct: 211 LPF 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLR-----------------EVAATKR--EFEQQ-- 379
+G G+YG+ YKA G V +K +R EVA +R FE
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 380 ---MEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNS 436
M+V T + + V + D+ L Y L + G A
Sbjct: 77 VRLMDVCAT-SRTDREIKVTLVFEHVDQDLRTY-----------LDKAPPPGLPAETIKD 124
Query: 437 RMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---TT 493
M+ L RG+ F+H+ H ++K N+L+T ++D GLA + ++ T
Sbjct: 125 LMRQFL---RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTP 178
Query: 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGK 531
T+ YRAPEV + D++S G + EM K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
H N+V + ++ +V Y G +F D A W + K A R I
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVF--------DYLVAHGW-MKEKEARAKFRQI 115
Query: 449 AFIHSEGGAKF-THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRAPE 504
KF H ++K+ N+LL D+N I+D G ++ F G Y APE
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 175
Query: 505 VTETRKAS-QKSDVYSFGVLLLEMLTGKAPL 534
+ + +K + DV+S GV+L +++G P
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 38/259 (14%)
Query: 299 GTAEKP-----KDFGSGVQEAEKNKLCFLDGSYFN--FDLEDLLRASAEVLGKGSYGSTY 351
G+AE P + + A KN L L F+ FD+ D E +G G+YG
Sbjct: 14 GSAEPPGPVKAEPAHTAASVAAKN-LALLKARSFDVTFDVGDEYEI-IETIGNGAYGVVS 71
Query: 352 KAILE-DGTTVVVKRLR---EVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407
A G V +K++ +V + ++++++ KH N++ + KD
Sbjct: 72 SARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAI------KDILRP 124
Query: 408 VYSYMPAGSLFMLLHRNRSD------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTH 461
Y S++++L SD L RG+ ++HS A+ H
Sbjct: 125 TVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIH 181
Query: 462 GNIKSSNVLLTQDLNGCISDVGLAHLI--------NFPTTATRTIGYRAPEVT-ETRKAS 512
++K SN+L+ ++ I D G+A + F T T YRAPE+ + +
Sbjct: 182 RDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYT 241
Query: 513 QKSDVYSFGVLLLEMLTGK 531
Q D++S G + EML +
Sbjct: 242 QAIDLWSVGCIFGEMLARR 260
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 330 DLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVK--RLREVAATKR-----EFEQQME 381
D+ED E LG G + K + G K + R +++++R E E+++
Sbjct: 9 DVEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 382 VVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIA 441
++ I +H N++ + + +K + +++ + G LF L S L + +
Sbjct: 68 ILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDEATQFL 121
Query: 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGLAHLINFPTTATR 496
G+ ++HS+ + H ++K N++L D N + D G+AH I
Sbjct: 122 KQILDGVHYLHSK---RIAHFDLKPENIMLL-DKNVPNPRIKLIDFGIAHKIEAGNEFKN 177
Query: 497 TIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
G + APE+ ++D++S GV+ +L+G +P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 370 AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGG 429
++ E E+++ ++ I +H N++ + + +K + +++ + G LF L S
Sbjct: 49 GVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--- 104
Query: 430 TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG-----CISDVGL 484
L + + G+ ++HS+ + H ++K N++L D N + D G+
Sbjct: 105 --LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLL-DKNVPNPRIKLIDFGI 158
Query: 485 AHLINFPTTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
AH I G + APE+ ++D++S GV+ +L+G +P
Sbjct: 159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 86/217 (39%), Gaps = 47/217 (21%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLR--------------EVAATKR--EFEQQ----- 379
+G G+YG+ YKA G V +K +R EVA +R FE
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 380 MEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMK 439
M+V T + + V + D+ L Y L + G A M+
Sbjct: 72 MDVCAT-SRTDREIKVTLVFEHVDQDLRTY-----------LDKAPPPGLPAETIKDLMR 119
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-----FPTTA 494
L RG+ F+H+ H ++K N+L+T ++D GLA + + FP
Sbjct: 120 QFL---RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGK 531
T + YRAPEV + D++S G + EM K
Sbjct: 174 T--LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 26/176 (14%)
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
+ A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVV 553
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------------- 300
Query: 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 301 -EEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 353
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 26/173 (15%)
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT------ 497
A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREE 556
+ + APE R + +SDV+SFGVLL E+ + G +P D EE
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 304
Query: 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 305 FCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 85/215 (39%), Gaps = 43/215 (20%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLR--------------EVAATKR--EFEQQ----- 379
+G G+YG+ YKA G V +K +R EVA +R FE
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 380 MEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMK 439
M+V T + + V + D+ L Y L + G A M+
Sbjct: 72 MDVCAT-SRTDREIKVTLVFEHVDQDLRTY-----------LDKAPPPGLPAETIKDLMR 119
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT---ATR 496
L RG+ F+H+ H ++K N+L+T ++D GLA + ++
Sbjct: 120 QFL---RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGK 531
T+ YRAPEV + D++S G + EM K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTT 493
+++ + + F H G H ++K +N++++ + D G+A I N T
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 494 ATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
IG Y +PE +SDVYS G +L E+LTG+ P D V
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 85/215 (39%), Gaps = 43/215 (20%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLR--------------EVAATKR--EFEQQ----- 379
+G G+YG+ YKA G V +K +R EVA +R FE
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 380 MEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMK 439
M+V T + + V + D+ L Y L + G A M+
Sbjct: 72 MDVCAT-SRTDREIKVTLVFEHVDQDLRTY-----------LDKAPPPGLPAETIKDLMR 119
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT---ATR 496
L RG+ F+H+ H ++K N+L+T ++D GLA + ++
Sbjct: 120 QFL---RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
Query: 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGK 531
T+ YRAPEV + D++S G + EM K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 26/176 (14%)
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
+ A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVV 553
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------------- 309
Query: 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 310 -EEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 362
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 26/176 (14%)
Query: 441 ALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT--- 497
+ A+G+ F+ S K H ++ + N+LL++ I D GLA I R
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 498 ---IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVV 553
+ + APE R + +SDV+SFGVLL E+ + G +P D
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------------- 307
Query: 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609
EE+ + + ++ D +M Q L C P RP ++V + + Q
Sbjct: 308 -EEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 360
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------- 489
+ I + A + F+HS+G H ++K SN+ T D + D GL ++
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 490 ---FPTTATR-----TIGYRAPEVTETRKASQKSDVYSFGVLLLEML 528
P AT T Y +PE S K D++S G++L E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 191
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 186
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 193
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 193
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 185
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 186
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YR 185
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 230
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 41/221 (18%)
Query: 341 VLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
VLG+G++G KA D +K++R ++ ++ ++ H VV A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN-HQYVVRYYAAW 71
Query: 400 YS-------------KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446
K + Y +L+ L+H + W ++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI------------NFP--- 491
+++IHS+G H ++K N+ + + N I D GLA + N P
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 492 ---TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEML 528
T+A T Y A EV + T ++K D+YS G++ EM+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 340 EVLGKGSYGSTYKAI-----LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSN 391
E LG G + K LE + KR + + E E+++ ++ + H N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPN 76
Query: 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI 451
++ + Y ++ + +++ + G LF L + S + + S +K L G+ ++
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILD---GVNYL 131
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCIS-----DVGLAHLINFPTTATRTIG---YRAP 503
H++ K H ++K N++L D N I D GLAH I G + AP
Sbjct: 132 HTK---KIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
E+ ++D++S GV+ +L+G +P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTT 493
+++ + + F H G H ++K +N++++ + D G+A I N T
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 494 ATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
IG Y +PE +SDVYS G +L E+LTG+ P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTT 493
+++ + + F H G H ++K +N++++ + D G+A I N T
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 494 ATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
IG Y +PE +SDVYS G +L E+LTG+ P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 197
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 186
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 36/209 (17%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAYY 399
LG+GS+G ++ + G VK++R E + E+V G S +VP+
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA-RGIAFIHSEGGAK 458
+ + GSL L+ + G D R LG A G+ ++H+ +
Sbjct: 134 REGPWVNIFMELLEGGSLGQLI---KQMGCLPED---RALYYLGQALEGLEYLHTR---R 184
Query: 459 FTHGNIKSSNVLLTQDLN-GCISDVGLAHLIN-------------FPTTATRTIGYRAPE 504
HG++K+ NVLL+ D + + D G A + P T T + APE
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET----HMAPE 240
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAP 533
V + K D++S ++L ML G P
Sbjct: 241 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 51/238 (21%)
Query: 335 LRASAEVLGKGSYGSTYKAILEDGTTVVVKRLR----EVAATKREFEQQMEVVGTIGKHS 390
L S ++LG GS G+ G V VKR+ ++A +++++ H
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 69
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSL---FMLLHRNRSDGGTAL--DWNSRMKIALGTA 445
NV+ YY S+ +Y + +L ++ +N SD L ++N + + A
Sbjct: 70 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP-ISLLRQIA 125
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLT-------------QDLNGCISDVGLAHLINFPT 492
G+A +HS K H ++K N+L++ ++L ISD GL ++
Sbjct: 126 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 493 TATR--------TIGYRAPEVTE-------TRKASQKSDVYSFGVLLLEMLT-GKAPL 534
++ R T G+RAPE+ E R+ ++ D++S G + +L+ GK P
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTT 493
+++ + + F H G H ++K +N++++ + D G+A I N T
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 494 ATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
IG Y +PE +SDVYS G +L E+LTG+ P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 31/239 (12%)
Query: 329 FDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEV-VGTIG 387
+D D+L E LG G++G ++ + + V V + ++ + E+ +
Sbjct: 50 YDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL 105
Query: 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR- 446
H ++ + + K E +++ ++ G LF D A D+ + R
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELF--------DRIAAEDYKMSEAEVINYMRQ 157
Query: 447 ---GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS--DVGLAHLIN---FPTTATRTI 498
G+ +H H +IK N++ + D GLA +N T T
Sbjct: 158 ACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA 214
Query: 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557
+ APE+ + +D+++ GVL +L+G +P +G DD+ L ++V R +W
Sbjct: 215 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF--AGEDDLETL----QNVKRCDW 267
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTT 493
+++ + + F H G H ++K +N++++ + D G+A I N T
Sbjct: 136 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 494 ATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
IG Y +PE +SDVYS G +L E+LTG+ P
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YR 230
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH-----LINFPTTATRTIGYR 501
GI +HS G H ++K SN+++ D I D GLA + P TR YR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YR 192
Query: 502 APEVTETRKASQKSDVYSFGVLLLEMLTGK 531
APEV + D++S G ++ EM+ K
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 28/148 (18%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVV---GTIGKHSNVVPV 395
E +G G +GS +K + DG +KR ++ A + + + V +G+HS+VV
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM----------KIALGTA 445
+ + D L+ Y GSL A+ N R+ + L
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSL-----------ADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473
RG+ +IHS H +IK SN+ +++
Sbjct: 126 RGLRYIHS---MSLVHMDIKPSNIFISR 150
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 335 LRASAEVLGKGSYGSTYKAILEDGTTVVVKRLR----EVAATKREFEQQMEVVGTIGKHS 390
L S ++LG GS G+ G V VKR+ ++A +++++ H
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------EIKLLTESDDHP 87
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSL---FMLLHRNRSDGGTAL--DWNSRMKIALGTA 445
NV+ YY S+ +Y + +L ++ +N SD L ++N + + A
Sbjct: 88 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP-ISLLRQIA 143
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLT-------------QDLNGCISDVGLAHLINFPT 492
G+A +HS K H ++K N+L++ ++L ISD GL ++
Sbjct: 144 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 493 TATR--------TIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLT-GKAPL 534
R T G+RAPE+ E R+ ++ D++S G + +L+ GK P
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 41/221 (18%)
Query: 341 VLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
VLG+G++G KA D +K++R ++ ++ ++ H VV A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLN-HQYVVRYYAAW 71
Query: 400 YS-------------KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446
K + Y +L+ L+H + W +I
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----E 127
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI------------NFP--- 491
+++IHS+G H N+K N+ + + N I D GLA + N P
Sbjct: 128 ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 492 ---TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEML 528
T+A T Y A EV + T ++K D YS G++ E +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 335 LRASAEVLGKGSYGSTYKAILEDGTTVVVKRLR----EVAATKREFEQQMEVVGTIGKHS 390
L S ++LG GS G+ G V VKR+ ++A +++++ H
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------EIKLLTESDDHP 87
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSL---FMLLHRNRSDGGTAL--DWNSRMKIALGTA 445
NV+ YY S+ +Y + +L ++ +N SD L ++N + + A
Sbjct: 88 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP-ISLLRQIA 143
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLT-------------QDLNGCISDVGLAHLINFPT 492
G+A +HS K H ++K N+L++ ++L ISD GL ++
Sbjct: 144 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 493 TATR--------TIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLT-GKAPL 534
R T G+RAPE+ E R+ ++ D++S G + +L+ GK P
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 28/148 (18%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVV---GTIGKHSNVVPV 395
E +G G +GS +K + DG +KR ++ A + + + V +G+HS+VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM----------KIALGTA 445
+ + D L+ Y GSL A+ N R+ + L
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSL-----------ADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473
RG+ +IHS H +IK SN+ +++
Sbjct: 124 RGLRYIHS---MSLVHMDIKPSNIFISR 148
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI 448
H N+V + ++ +V Y G +F L + G + +R K +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH----GRXKEKEARAKFR-QIVSAV 126
Query: 449 AFIHSEGGAKF-THGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRAPE 504
+ H KF H ++K+ N+LL D N I+D G ++ F G Y APE
Sbjct: 127 QYCHQ----KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 505 VTETRKAS-QKSDVYSFGVLLLEMLTGKAPL 534
+ + +K + DV+S GV+L +++G P
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 28/148 (18%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVV---GTIGKHSNVVPV 395
E +G G +GS +K + DG +KR ++ A + + + V +G+HS+VV
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM----------KIALGTA 445
+ + D L+ Y GSL A+ N R+ + L
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSL-----------ADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473
RG+ +IHS H +IK SN+ +++
Sbjct: 122 RGLRYIHS---MSLVHMDIKPSNIFISR 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 28/148 (18%)
Query: 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVV---GTIGKHSNVVPV 395
E +G G +GS +K + DG +KR ++ A + + + V +G+HS+VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM----------KIALGTA 445
+ + D L+ Y GSL A+ N R+ + L
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSL-----------ADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473
RG+ +IHS H +IK SN+ +++
Sbjct: 124 RGLRYIHS---MSLVHMDIKPSNIFISR 148
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 91/234 (38%), Gaps = 49/234 (20%)
Query: 333 DLLRASAEV---LGKGSYGSTYKAILED--GTTVVVKRLREV---AATKREFEQQMEVVG 384
D+L A E+ LG+G++G + I G V VK ++ V R Q +E +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 385 TIGKHSN--VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL 442
T +S V + ++ +V+ + + + + +G + K+A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMAY 125
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH----------LIN--- 489
+ + F+HS K TH ++K N+L Q SD A+ LIN
Sbjct: 126 QICKSVNFLHSN---KLTHTDLKPENILFVQ------SDYTEAYNPKIKRDERTLINPDI 176
Query: 490 -------------FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTG 530
+T T YRAPEV SQ DV+S G +L+E G
Sbjct: 177 KVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 429 GTALDWNSRMKIALGTARGIAFIHSEGGAKF-------THGNIKSSNVLLTQDLNGCISD 481
G L R + L R +A + G A TH ++K N+L++ D + D
Sbjct: 118 GVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVD 177
Query: 482 VGLAHLINFP--TTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
G+A T T+G Y APE A+ ++D+Y+ +L E LTG P Q
Sbjct: 178 FGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 51/242 (21%)
Query: 342 LGKGSYGSTYKAI--LEDG--TTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRA 397
+G+G++ S Y A L+ G + +K L + R +++ + G NV+ V+
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR-IAAELQCLTVAGGQDNVMGVKY 87
Query: 398 YYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGA 457
+ D ++ Y+ S +L+ +L + + L + + IH G
Sbjct: 88 CFRKNDHVVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG-- 137
Query: 458 KFTHGNIKSSNVLLTQDLNG-CISDVGLAH--------LINFPTTATR------------ 496
H ++K SN L + L + D GLA L+ F + +
Sbjct: 138 -IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC 196
Query: 497 ------------TIGYRAPEV-TETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543
T G+RAPEV T+ + D++S GV+ L +L+G+ P + DD+
Sbjct: 197 LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF-YKASDDLT 255
Query: 544 DL 545
L
Sbjct: 256 AL 257
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-----VVP 394
++GKGS+G KA + V +K ++ A + + ++ ++ + KH +V
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
++ ++ ++ +V+ M + +L+ LL RN + G +L+ + + TA + F+ +
Sbjct: 121 LKRHFMFRNHLCLVFE-MLSYNLYDLL-RNTNFRGVSLNLTRKFAQQMCTA--LLFL-AT 175
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKA 511
H ++K N+LL I V + I YR+PEV
Sbjct: 176 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 512 SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
D++S G +L+EM TG+ PL SG ++V
Sbjct: 236 DLAIDMWSLGCILVEMHTGE-PL-FSGANEV 264
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------------ 491
T R + +H G+ H ++K SN+L+ + + + D GLA +I+
Sbjct: 121 TLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 492 --TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEML 528
T T YRAPEV T K S+ DV+S G +L E+
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 26/207 (12%)
Query: 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEV-VGTIGKHSNVVPVRAY 398
+LG+G+YG A + G V +K++ E+ + KH N++ + +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI--F 75
Query: 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAK 458
+ + ++ + M +R L + T R + +H G+
Sbjct: 76 NIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSN 132
Query: 459 FTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPT---------TATRTIGYRA 502
H ++K SN+L+ + + + D GLA +I+ PT ATR YRA
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR--WYRA 190
Query: 503 PEVTETR-KASQKSDVYSFGVLLLEML 528
PEV T K S+ DV+S G +L E+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 36/209 (17%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAYY 399
+G+GS+G ++ + G VK++R E + E+V G S +VP+
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA-RGIAFIHSEGGAK 458
+ + GSL L+ + G D R LG A G+ ++H+ +
Sbjct: 120 REGPWVNIFMELLEGGSLGQLI---KQMGCLPED---RALYYLGQALEGLEYLHTR---R 170
Query: 459 FTHGNIKSSNVLLTQDLN-GCISDVGLAHLIN-------------FPTTATRTIGYRAPE 504
HG++K+ NVLL+ D + + D G A + P T T + APE
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET----HMAPE 226
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAP 533
V + K D++S ++L ML G P
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 51/238 (21%)
Query: 335 LRASAEVLGKGSYGSTYKAILEDGTTVVVKRLR----EVAATKREFEQQMEVVGTIGKHS 390
L S ++LG GS G+ G V VKR+ ++A +++++ H
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 69
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSL---FMLLHRNRSDGGTAL--DWNSRMKIALGTA 445
NV+ YY S+ +Y + +L ++ +N SD L ++N + + A
Sbjct: 70 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP-ISLLRQIA 125
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLT-------------QDLNGCISDVGLAHLINFPT 492
G+A +HS K H ++K N+L++ ++L ISD GL ++
Sbjct: 126 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 493 TATR--------TIGYRAPEVTE-------TRKASQKSDVYSFGVLLLEMLT-GKAPL 534
R T G+RAPE+ E R+ ++ D++S G + +L+ GK P
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 44/225 (19%)
Query: 340 EVLGKGSYGSTY---------------KAILEDGTTVVVKRLREVAATKREFEQQMEVVG 384
+VLG G+YG + +L+ T V + E T+R+ + +
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI---- 115
Query: 385 TIGKHSNVVPVRAYYYSKDEKL-VVYSYMPAGSLFMLL-HRNRSDGGTALDWNSRMKIAL 442
+ S + Y + + KL ++ Y+ G LF L R R + + +AL
Sbjct: 116 ---RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL 172
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------ 496
+ I+ +IK N+LL + + ++D GL+ F T
Sbjct: 173 EHLHKLGIIYR---------DIKLENILLDSNGHVVLTDFGLSK--EFVADETERAYDFC 221
Query: 497 -TIGYRAPEVTETRKASQKS--DVYSFGVLLLEMLTGKAPLQHSG 538
TI Y AP++ + D +S GVL+ E+LTG +P G
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 438 MKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPTT 493
+++ + + F H G H ++K +N+L++ + D G+A I N
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 494 ATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
IG Y +PE +SDVYS G +L E+LTG+ P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 22/102 (21%)
Query: 444 TARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN-------FPT---- 492
T R + +H G+ H ++K SN+L+ + + + D GLA +I+ PT
Sbjct: 121 TLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 493 -----TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEML 528
ATR YRAPEV T K S+ DV+S G +L E+
Sbjct: 178 GMTEYVATR--WYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-----VVP 394
++GKGS+G KA + V +K ++ A + + ++ ++ + KH +V
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 101
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
++ ++ ++ +V+ M + +L+ LL RN + G +L+ + + TA + F+ +
Sbjct: 102 LKRHFMFRNHLCLVFE-MLSYNLYDLL-RNTNFRGVSLNLTRKFAQQMCTA--LLFL-AT 156
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKA 511
H ++K N+LL I V + I YR+PEV
Sbjct: 157 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPY 216
Query: 512 SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
D++S G +L+EM TG+ PL SG ++V
Sbjct: 217 DLAIDMWSLGCILVEMHTGE-PL-FSGANEV 245
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-----VVP 394
++GKGS+G KA + V +K ++ A + + ++ ++ + KH +V
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
++ ++ ++ +V+ M + +L+ LL RN + G +L+ + + TA + F+ +
Sbjct: 121 LKRHFMFRNHLCLVFE-MLSYNLYDLL-RNTNFRGVSLNLTRKFAQQMCTA--LLFL-AT 175
Query: 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKA 511
H ++K N+LL I V + I YR+PEV
Sbjct: 176 PELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 512 SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV 542
D++S G +L+EM TG+ PL SG ++V
Sbjct: 236 DLAIDMWSLGCILVEMHTGE-PL-FSGANEV 264
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 416 SLFMLLHRNRSDGGTALDW---NSRMKIALGTAR------GIAFIHSEGGAKFTHGNIKS 466
+L++++ + GG D+ + RMK ++ + + H + + H ++K+
Sbjct: 85 TLYLIM--EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKA 139
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKAS-QKSDVYSFGV 522
N+LL D+N I+D G ++ G Y APE+ + +K + DV+S GV
Sbjct: 140 ENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 523 LLLEMLTGKAPL 534
+L +++G P
Sbjct: 200 ILYTLVSGSLPF 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 36/209 (17%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAYY 399
+G+GS+G ++ + G VK++R E + E+V G S +VP+
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA-RGIAFIHSEGGAK 458
+ + GSL L+ + G D R LG A G+ ++H+ +
Sbjct: 136 REGPWVNIFMELLEGGSLGQLI---KQMGCLPED---RALYYLGQALEGLEYLHTR---R 186
Query: 459 FTHGNIKSSNVLLTQD-LNGCISDVGLAHLIN-------------FPTTATRTIGYRAPE 504
HG++K+ NVLL+ D + D G A + P T T + APE
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET----HMAPE 242
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAP 533
V + K D++S ++L ML G P
Sbjct: 243 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 426 SDGGTALDW---NSRMKIALGTAR------GIAFIHSEGGAKFTHGNIKSSNVLLTQDLN 476
+ GG D+ + RMK A+ + + H + H ++K+ N+LL D+N
Sbjct: 96 ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK---YIVHRDLKAENLLLDGDMN 152
Query: 477 GCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKA 532
I+D G ++ G Y APE+ + +K + DV+S GV+L +++G
Sbjct: 153 IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 533 PL 534
P
Sbjct: 213 PF 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 416 SLFMLLHRNRSDGGTALDW---NSRMKIALGTAR------GIAFIHSEGGAKFTHGNIKS 466
+L++++ + GG D+ + RMK ++ + + H + + H ++K+
Sbjct: 88 TLYLIMEY--ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKA 142
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRAPEVTETRKAS-QKSDVYSFGV 522
N+LL D+N I+D G ++ G Y APE+ + +K + DV+S GV
Sbjct: 143 ENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 523 LLLEMLTGKAPL 534
+L +++G P
Sbjct: 203 ILYTLVSGSLPF 214
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 49/267 (18%)
Query: 308 GSGVQE--AEKNKLCFLDGSYFNFDLEDLLRASAE--VLGKGSYGSTYKAILEDGTTVVV 363
GSG++E A K + +D D +D +SA + KG S K I G++ V
Sbjct: 14 GSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVF 73
Query: 364 KRLRE---VAATK------------REFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408
+ L E + A K + ++ + + +HS+ + +R Y Y ++ +
Sbjct: 74 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLYDYEITDQYI- 131
Query: 409 YSYMPAGSLFM--LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
Y M G++ + L + +S +D R + IH G H ++K
Sbjct: 132 YMVMECGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKP 183
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTAT------RTIGYRAPEVTETRKASQKS----- 515
+N L+ + I D G+A+ + TT+ T+ Y PE + +S+++
Sbjct: 184 ANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 242
Query: 516 ------DVYSFGVLLLEMLTGKAPLQH 536
DV+S G +L M GK P Q
Sbjct: 243 KISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-----NVV 393
+V+GKGS+G KA V +K +R R+ +++ ++ + K NV+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ + ++ + + + + +L+ L+ +N+ G K A + + +H
Sbjct: 163 HMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG---FSLPLVRKFAHSILQCLDALHK 218
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCIS--DVG---LAHLINFPTTATRTIGYRAPEVTET 508
+ H ++K N+LL Q I D G H + +R YRAPEV
Sbjct: 219 N---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF--YRAPEVILG 273
Query: 509 RKASQKSDVYSFGVLLLEMLTG 530
+ D++S G +L E+LTG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-----NVV 393
+V+GKGS+G KA V +K +R R+ +++ ++ + K NV+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ + ++ + + + + +L+ L+ +N+ G K A + + +H
Sbjct: 163 HMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG---FSLPLVRKFAHSILQCLDALHK 218
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCIS--DVG---LAHLINFPTTATRTIGYRAPEVTET 508
+ H ++K N+LL Q I D G H + +R YRAPEV
Sbjct: 219 N---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF--YRAPEVILG 273
Query: 509 RKASQKSDVYSFGVLLLEMLTG 530
+ D++S G +L E+LTG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 424 NRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL-TQDLNGCISDV 482
N + G L+ ++R+ RG+ +IHS A H ++K +N+ + T+DL I D
Sbjct: 110 NVLEQGPLLEEHARL-FMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDF 165
Query: 483 GLAHLINFPTTATR--------TIGYRAPEVTETRKASQKS-DVYSFGVLLLEMLTGKAP 533
GLA +++ P + + T YR+P + + K+ D+++ G + EMLTGK
Sbjct: 166 GLARIMD-PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
Query: 534 LQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564
+ + + L VV EE E+ V
Sbjct: 225 FAGAHELEQMQLILESIPVVHEEDRQELLSV 255
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----FPTTATRTIGYR 501
+GI ++H + K H +IK SN+L+ +D + I+D G+++ + T +
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFM 204
Query: 502 APE-VTETRK--ASQKSDVYSFGVLLLEMLTGKAPL 534
APE ++ETRK + + DV++ GV L + G+ P
Sbjct: 205 APESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 49/234 (20%)
Query: 333 DLLRASAEV---LGKGSYGSTYKAILED--GTTVVVKRLREV---AATKREFEQQMEVVG 384
D+L A E+ LG+G++G + I G V VK ++ V R Q +E +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 385 TIGKHSN--VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIAL 442
T +S V + ++ +V+ + + + + +G + K+A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMAY 125
Query: 443 GTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH----------LIN--- 489
+ + F+HS K TH ++K N+L Q SD A+ LIN
Sbjct: 126 QICKSVNFLHSN---KLTHTDLKPENILFVQ------SDYTEAYNPKIKRDERTLINPDI 176
Query: 490 -------------FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTG 530
+T YRAPEV SQ DV+S G +L+E G
Sbjct: 177 KVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 104 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 155
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPT-TATRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 156 ENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 215
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 216 EMAAGYPPF 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPT-TATRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V YMP G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYMPGGDMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 49/267 (18%)
Query: 308 GSGVQE--AEKNKLCFLDGSYFNFDLEDLLRASAE--VLGKGSYGSTYKAILEDGTTVVV 363
GSG++E A K + +D D +D +SA + KG S K I G++ V
Sbjct: 14 GSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVF 73
Query: 364 KRLRE---VAATK------------REFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408
+ L E + A K + ++ + + +HS+ + +R Y Y ++ +
Sbjct: 74 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLYDYEITDQYI- 131
Query: 409 YSYMPAGSLFM--LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
Y M G++ + L + +S +D R + IH G H ++K
Sbjct: 132 YMVMECGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKP 183
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTAT------RTIGYRAPEVTETRKASQKS----- 515
+N L+ + I D G+A+ + TT+ T+ Y PE + +S+++
Sbjct: 184 ANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 242
Query: 516 ------DVYSFGVLLLEMLTGKAPLQH 536
DV+S G +L M GK P Q
Sbjct: 243 KISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V YMP G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYMPGGDMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 369 VAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDG 428
+ + +F+ +++++ I K+ + + DE ++Y YM S+ +
Sbjct: 83 IKSKYDDFKNELQIITDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKF-----DEY 136
Query: 429 GTALDWNSRMKIALGTARGI--------AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS 480
LD N I + + I ++IH+E H ++K SN+L+ ++ +S
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI--CHRDVKPSNILMDKNGRVKLS 194
Query: 481 DVGLA-HLINFPTTATR-TIGYRAPEV--TETRKASQKSDVYSFGVLLLEMLTGKAPL 534
D G + ++++ +R T + PE E+ K D++S G+ L M P
Sbjct: 195 DFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 21/211 (9%)
Query: 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHS 390
EV+GKG++ + I E G VK + +VA + + +++ + + KH
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHML-KHP 86
Query: 391 NVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
++V + Y S +V+ +M L + + R+D G + +
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYMRQILEALRY 145
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLA-HLINFPTTATRTIG---YRAP 503
H H ++K NVLL N + D G+A L A +G + AP
Sbjct: 146 CHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
EV + + DV+ GV+L +L+G P
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLF--MLLHRNRSDGGTALDWNSRMKIALGTAR 446
H N++ + ++ K +V G LF ++L + S+ A+ MK L
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----IMKQVLS--- 115
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPTTATRTIG---Y 500
G ++H H ++K N+LL ++D I D GL+ +G Y
Sbjct: 116 GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 172
Query: 501 RAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APEV +K +K DV+S GV+L +L G P
Sbjct: 173 IAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 42/224 (18%)
Query: 339 AEVLGKGSYGSTYKAILEDG-TTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRA 397
++G+GSYG Y A ++ V +K++ + + ++ + + + + + +R
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 398 YYYSKDEKLVVYSYMPAGSLFMLLHRNRSD------GGTALDWNSRMKIALGTARGIAFI 451
Y + ++ + L+++L SD L I G FI
Sbjct: 91 Y-----DLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-------------------- 491
H G H ++K +N LL QD + + D GLA IN
Sbjct: 146 HESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 492 ------TTATRTIGYRAPEVTETRKASQKS-DVYSFGVLLLEML 528
T+ T YRAPE+ ++ KS D++S G + E+L
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 33/217 (15%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAY 398
+G G ++ + E +K + A T + ++ + + +HS+ + +R Y
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLY 78
Query: 399 YYSKDEKLVVYSYMPAGSLFM--LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y ++ + Y M G++ + L + +S +D R + IH G
Sbjct: 79 DYEITDQYI-YMVMECGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQHG- 131
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVTETRK 510
H ++K +N L+ + I D G+A+ + TT+ T+ Y PE +
Sbjct: 132 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 511 ASQKS-----------DVYSFGVLLLEMLTGKAPLQH 536
+S+++ DV+S G +L M GK P Q
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 389 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLF--MLLHRNRSDGGTALDWNSRMKIALGTAR 446
H N++ + ++ K +V G LF ++L + S+ A+ I
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVLS 132
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPTTATRTIG---Y 500
G ++H H ++K N+LL ++D I D GL+ +G Y
Sbjct: 133 GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 189
Query: 501 RAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
APEV +K +K DV+S GV+L +L G P
Sbjct: 190 IAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 28/210 (13%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPV 395
E LGKG++ + + ++ +++ + A ++ E++ + + KH N+V +
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRL 75
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLL----HRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ +++ + G LF + + + +D + +
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---------QILEAVLHC 126
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA----TRTIGYRAPE 504
H G H N+K N+LL L G ++D GLA + A T GY +PE
Sbjct: 127 HQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 183
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
V + D+++ GV+L +L G P
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 21/228 (9%)
Query: 321 FLDGSYFNFD-LEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQ 379
++DGS N D L D +E LG+G+ Y+ + ++ + K+ +
Sbjct: 42 WIDGS--NRDALSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTE 98
Query: 380 MEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF-MLLHRNRSDGGTALDWNSRM 438
+ V+ + H N++ ++ + + E +V + G LF ++ + A D ++
Sbjct: 99 IGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI 157
Query: 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFPT--- 492
+A++H G H ++K N+L D I+D GL+ ++
Sbjct: 158 ------LEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540
T T GY APE+ + D++S G++ +L G P D
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD 256
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 340 EVLGKGSYGSTYKAILEDGTTV-VVKRLREVAATKRE----FEQQMEVVGTIGKHSNVVP 394
+V+G+G++G +++ + +K L + KR F ++ +V+ G +
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITA 154
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHR--NRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + ++ +V Y G L LL + ++ A + M +A+ + + ++H
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 214
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCI--SDVGLAHLINFPTTATRTIG-----YRAPEV 505
+IK NVLL D+NG I +D G +N T ++ Y +PE+
Sbjct: 215 R---------DIKPDNVLL--DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 263
Query: 506 TETR-----KASQKSDVYSFGVLLLEMLTGKAPL 534
+ K + D +S GV + EML G+ P
Sbjct: 264 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 340 EVLGKGSYGSTYKAILEDGTTV-VVKRLREVAATKRE----FEQQMEVVGTIGKHSNVVP 394
+V+G+G++G +++ + +K L + KR F ++ +V+ G +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITA 138
Query: 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHR--NRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + ++ +V Y G L LL + ++ A + M +A+ + + ++H
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 198
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCI--SDVGLAHLINFPTTATRTIG-----YRAPEV 505
+IK NVLL D+NG I +D G +N T ++ Y +PE+
Sbjct: 199 R---------DIKPDNVLL--DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 247
Query: 506 TETR-----KASQKSDVYSFGVLLLEMLTGKAPL 534
+ K + D +S GV + EML G+ P
Sbjct: 248 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 33/217 (15%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAY 398
+G G ++ + E +K + A T + ++ + + +HS+ + +R Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLY 94
Query: 399 YYSKDEKLVVYSYMPAGSLFM--LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y ++ + Y M G++ + L + +S +D R + IH G
Sbjct: 95 DYEITDQYI-YMVMECGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQHG- 147
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVTETRK 510
H ++K +N L+ + I D G+A+ + TT+ T+ Y PE +
Sbjct: 148 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 511 ASQKS-----------DVYSFGVLLLEMLTGKAPLQH 536
+S+++ DV+S G +L M GK P Q
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 33/217 (15%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAY 398
+G G ++ + E +K + A T + ++ + + +HS+ + +R Y
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLY 74
Query: 399 YYSKDEKLVVYSYMPAGSLFM--LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y ++ + Y M G++ + L + +S +D R + IH G
Sbjct: 75 DYEITDQYI-YMVMECGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQHG- 127
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVTETRK 510
H ++K +N L+ + I D G+A+ + TT+ T+ Y PE +
Sbjct: 128 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 511 ASQKS-----------DVYSFGVLLLEMLTGKAPLQH 536
+S+++ DV+S G +L M GK P Q
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 85/226 (37%), Gaps = 45/226 (19%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY 399
++G+GSYG Y A ++ V + R FE ++ + + + + +++ Y
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVA-----IKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 400 YSKDEKLVV-YSYMPAGSLFMLLHRNRSD------GGTALDWNSRMKIALGTARGIAFIH 452
+ L++ + L+++L SD L I G FIH
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--------------------- 491
G H ++K +N LL QD + I D GLA IN
Sbjct: 149 ESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 492 --------TTATRTIGYRAPEVTETRKASQKS-DVYSFGVLLLEML 528
T+ T YRAPE+ ++ S D++S G + E+L
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 20/202 (9%)
Query: 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-----NVV 393
+V+GKG +G KA V +K +R R+ +++ ++ + K NV+
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ + ++ + + + + +L+ L+ +N+ G K A + + +H
Sbjct: 163 HMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG---FSLPLVRKFAHSILQCLDALHK 218
Query: 454 EGGAKFTHGNIKSSNVLLTQDLNGCIS--DVG---LAHLINFPTTATRTIGYRAPEVTET 508
+ H ++K N+LL Q I D G H + +R YRAPEV
Sbjct: 219 N---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF--YRAPEVILG 273
Query: 509 RKASQKSDVYSFGVLLLEMLTG 530
+ D++S G +L E+LTG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYVPGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 111 MVMEYVPGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 162
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 223 EMAAGYPPF 231
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 85/209 (40%), Gaps = 20/209 (9%)
Query: 338 SAEVLGKGSYGSTYKAIL----EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVV 393
+++ LG+G + + I ++ +K+ R + E ++ V+ V+
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS 453
+ Y + E +++ Y G +F L + + N +++ G+ ++H
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLC---LPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 454 EGGAKFTHGNIKSSNVLLTQ-----DLNGCISDVGLAHLINFPTTATRTIG---YRAPEV 505
H ++K N+LL+ D+ I D G++ I +G Y APE+
Sbjct: 150 NN---IVHLDLKPQNILLSSIYPLGDIK--IVDFGMSRKIGHACELREIMGTPEYLAPEI 204
Query: 506 TETRKASQKSDVYSFGVLLLEMLTGKAPL 534
+ +D+++ G++ +LT +P
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 26/233 (11%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVV-VKRLR------EVAATKREFEQQMEVVGTIGKHSNV 392
+ LG+G + + YKA ++ +V +K+++ R ++++++ + H N+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNI 74
Query: 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH 452
+ + + K +V+ +M ++ D L + L T +G+ ++H
Sbjct: 75 IGLLDAFGHKSNISLVFDFMETDLEVII-----KDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 453 SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR----TIGYRAPEVT-E 507
H ++K +N+LL ++ ++D GLA P A T YRAPE+
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFG 186
Query: 508 TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSV---VREEW 557
R D+++ G +L E+L + P G D+ L R ++ E+W
Sbjct: 187 ARMYGVGVDMWAVGCILAELLL-RVPFL-PGDSDLDQLTRIFETLGTPTEEQW 237
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 18/205 (8%)
Query: 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG---KHSNVVPVR 396
E LGKG++ + + + T ++ Q++E I KH N+V +
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
+ +V+ + G LF + A ++ S + + + ++
Sbjct: 97 DSISEEGFHYLVFDLVTGGELF--------EDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 457 AKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA----TRTIGYRAPEVTETR 509
H ++K N+LL G ++D GLA + A T GY +PEV
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 510 KASQKSDVYSFGVLLLEMLTGKAPL 534
+ D+++ GV+L +L G P
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 33/216 (15%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAY 398
+G G ++ + E +K + A T + ++ + + +HS+ + +R Y
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLY 75
Query: 399 YYSKDEKLVVYSYMPAGSLFM--LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y ++ + Y M G++ + L + +S +D R + IH G
Sbjct: 76 DYEITDQYI-YMVMECGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQHG- 128
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR------TIGYRAPEVTETRK 510
H ++K +N L+ + I D G+A+ + TT+ T+ Y PE +
Sbjct: 129 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 511 ASQKS-----------DVYSFGVLLLEMLTGKAPLQ 535
+S+++ DV+S G +L M GK P Q
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPVRA 397
+ LG GS+G +E G +K L + K +E E + + + V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 398 YYYSKDEK--LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
+ KD +V Y P G +F L R G + ++R A ++HS
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS-- 159
Query: 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQK 514
+ ++K N+++ Q ++D GLA + T T Y APE+ ++ ++
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 515 SDVYSFGVLLLEMLTGKAPL 534
D ++ GVL+ EM G P
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATK-REFEQQMEVVGTIGKHSNVVPVRA 397
+ LG GS+G +E G +K L + K +E E + + + V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 398 YYYSKDEK--LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
+ KD +V Y P G +F L R G + ++R A ++HS
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS-- 159
Query: 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQK 514
+ ++K N+++ Q ++D GLA + T T Y APE+ ++ ++
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 515 SDVYSFGVLLLEMLTGKAPL 534
D ++ GVL+ EM G P
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 111 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 162
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 223 EMAAGYPPF 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 139 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 190
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 250
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 251 EMAAGYPPF 259
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 49/267 (18%)
Query: 308 GSGVQE--AEKNKLCFLDGSYFNFDLEDLLRASAE--VLGKGSYGSTYKAILEDGTTVVV 363
GSG++E A K + +D D +D +SA + KG S K I G++ V
Sbjct: 14 GSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVF 73
Query: 364 KRLRE---VAATK------------REFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408
+ L E + A K + ++ + + +HS+ + +R Y Y ++ +
Sbjct: 74 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLYDYEITDQYI- 131
Query: 409 YSYMPAGSLFM--LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
Y M G++ + L + +S +D R + IH G H ++K
Sbjct: 132 YMVMECGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKP 183
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTAT------RTIGYRAPEVTETRKASQKS----- 515
+N L+ + I D G+A+ + TT+ + Y PE + +S+++
Sbjct: 184 ANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKS 242
Query: 516 ------DVYSFGVLLLEMLTGKAPLQH 536
DV+S G +L M GK P Q
Sbjct: 243 KISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 35/114 (30%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--------------- 491
G+ ++HS G H ++K +N L+ QD + + D GLA +++P
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 492 ----------------TTATRTIGYRAPEVTETRK-ASQKSDVYSFGVLLLEML 528
T T YRAPE+ ++ ++ DV+S G + E+L
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI 498
K+ + + + ++ + G H ++K SN+LL + + D G++ + R+
Sbjct: 128 KMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 499 G---YRAPEVTETRKASQ-----KSDVYSFGVLLLEMLTGKAPLQHSGHD 540
G Y APE + ++ ++DV+S G+ L+E+ TG+ P ++ D
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVLEYAPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYAPGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+++ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYAPGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+++ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 88 NSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQ-LNALD 146
NS+ K++ + L + + T+ + + + ++ L +N + PA +L+ L L
Sbjct: 433 NSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQ 492
Query: 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSI--SGAIPPL-NLPRLKILNFSNNNL 198
S NA N+ G NL RL L L NN + S AI PL + PRL +LN N+L
Sbjct: 493 ASDNALE-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 88 NSIGKLDALKILSLRSNYL--NGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNAL 145
++ + A + LRS +L N L + + L +L + + + + L + L
Sbjct: 412 KAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVL---HLAHKDLTVLCHLEQLLLVTHL 468
Query: 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGS 201
DLS N +PP L L +L +N++ NLPRL+ L NN L S
Sbjct: 469 DLSHNRLRA-LPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQS 523
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 88 NSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQ-LNALD 146
NS+ K++ + L + + T+ + + + ++ L +N + PA +L+ L L
Sbjct: 433 NSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQ 492
Query: 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSI--SGAIPPL-NLPRLKILNFSNNNL 198
S NA N+ G NL RL L L NN + S AI PL + PRL +LN N+L
Sbjct: 493 ASDNALE-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 88 NSIGKLDALKILSLRSNYL--NGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNAL 145
++ + A + LRS +L N L + + L +L + + + + L + L
Sbjct: 412 KAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVL---HLAHKDLTVLCHLEQLLLVTHL 468
Query: 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGS 201
DLS N +PP L L +L +N++ NLPRL+ L NN L S
Sbjct: 469 DLSHNRLRA-LPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQS 523
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 139 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 190
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPT-TATRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 250
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 251 EMAAGYPPF 259
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 83/210 (39%), Gaps = 28/210 (13%)
Query: 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPV 395
E LGKG++ + + ++ ++ + A ++ E++ + + KH N+V +
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLL-KHPNIVRL 86
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLL----HRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ +++ + G LF + + + +D + +
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---------QILEAVLHC 137
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA----TRTIGYRAPE 504
H G H ++K N+LL L G ++D GLA + A T GY +PE
Sbjct: 138 HQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 194
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
V + D+++ GV+L +L G P
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 28/210 (13%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIG---KHSNVVPV 395
E +GKG++ + + L G K + + R+ Q++E I KHSN+V +
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD-HQKLEREARICRLLKHSNIVRL 68
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLL----HRNRSDGGTALDWNSRMKIALGTARGIAFI 451
+ +V+ + G LF + + + +D + +
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ---------QILEAVLHC 119
Query: 452 HSEGGAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA----TRTIGYRAPE 504
H G H ++K N+LL G ++D GLA + A T GY +PE
Sbjct: 120 HQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 505 VTETRKASQKSDVYSFGVLLLEMLTGKAPL 534
V + D+++ GV+L +L G P
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYAPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+++ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 33/217 (15%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAY 398
+G G ++ + E +K + A T + ++ + + +HS+ + +R Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLY 94
Query: 399 YYSKDEKLVVYSYMPAGSLFM--LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456
Y ++ + Y M G++ + L + +S +D R + IH G
Sbjct: 95 DYEITDQYI-YMVMECGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQHG- 147
Query: 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN------FPTTATRTIGYRAPEVTETRK 510
H ++K +N L+ + I D G+A+ + + T+ Y PE +
Sbjct: 148 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 511 ASQKS-----------DVYSFGVLLLEMLTGKAPLQH 536
+S+++ DV+S G +L M GK P Q
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y P G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYAPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+++ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYAPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+++ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYAPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+++ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFE----QQMEVVGTIGKHSNVVPVR 396
+G+G++G +KA + G V +K++ + K F ++++++ + KH NVV +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLL-KHENVVNLI 83
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR--------GI 448
+K Y+ GS++++ D L N +K L + G+
Sbjct: 84 EICRTKASP---YNRC-KGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGL 138
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA--------TRTIGY 500
+IH K H ++K++NVL+T+D ++D GLA + + T+ Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 501 RAPE-VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
R PE + R D++ G ++ EM T +Q
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y P G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYAPGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+++ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFE----QQMEVVGTIGKHSNVVPVR 396
+G+G++G +KA + G V +K++ + K F ++++++ + KH NVV +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLL-KHENVVNLI 82
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR--------GI 448
+K Y+ GS++++ D L N +K L + G+
Sbjct: 83 EICRTKASP---YNRC-KGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGL 137
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA--------TRTIGY 500
+IH K H ++K++NVL+T+D ++D GLA + + T+ Y
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 501 RAPE-VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
R PE + R D++ G ++ EM T +Q
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 230
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA--------TRTI 498
G+ +IH K H ++K++NVL+T+D ++D GLA + + T+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 499 GYRAPE-VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
YR PE + R D++ G ++ EM T +Q
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 102/283 (36%), Gaps = 64/283 (22%)
Query: 341 VLGKGSYGSTYKAI-LEDGTTVVVK-----RLREVAATKREFEQQMEVV---GTIGKHSN 391
+LG G +GS Y I + D V +K R+ + MEVV S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 392 VVPVRAYYYSKDEKLVVYSYM-PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF 450
V+ + ++ D +++ M P LF + AL +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRH 129
Query: 451 IHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA------------TRTI 498
H+ G H +IK N+L+ DLN G LI+F + A TR
Sbjct: 130 CHNCG---VLHRDIKDENILI--DLNR-----GELKLIDFGSGALLKDTVYTDFDGTRV- 178
Query: 499 GYRAPE-VTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557
Y PE + R + + V+S G+LL +M+ G P +H
Sbjct: 179 -YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------------------- 217
Query: 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDV 600
E+ ++ Q V E +++ C+A P RP +++
Sbjct: 218 -EEIIRGQVFFRQRVSSECQHLIRW---CLALRPSDRPTFEEI 256
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 342 LGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFE----QQMEVVGTIGKHSNVVPVR 396
+G+G++G +KA + G V +K++ + K F ++++++ + KH NVV +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLL-KHENVVNLI 83
Query: 397 AYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR--------GI 448
+K Y+ GS++++ D L N +K L + G+
Sbjct: 84 EICRTKASP---YNRC-KGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGL 138
Query: 449 AFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA--------TRTIGY 500
+IH K H ++K++NVL+T+D ++D GLA + + T+ Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 501 RAPE-VTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
R PE + R D++ G ++ EM T +Q
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 113 MVMEYVAGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 164
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 165 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 224
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 225 EMAAGYPPF 233
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTI-------G 499
G+ ++HS+G H +IK N+LLT IS +G+A ++ P A T
Sbjct: 121 GLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALH-PFAADDTCRTSQGSPA 176
Query: 500 YRAPEVTETRK--ASQKSDVYSFGVLLLEMLTGKAPLQ 535
++ PE+ + K D++S GV L + TG P +
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 139 MVMEYVAGGEMFSHLRRI----GRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 190
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 250
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 251 EMAAGYPPF 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFAEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTATR-TIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 23/116 (19%)
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVL-------LTQDLNGC------------IS 480
+A + + F+H K TH ++K N+L LT +L +
Sbjct: 142 MAFQLCQAVKFLHDN---KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVV 198
Query: 481 DVGLAHLIN-FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535
D G A + +T T YRAPEV SQ DV+S G ++ E G Q
Sbjct: 199 DFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQ 254
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 119 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 231 EMAAGYPPF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 125 LQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG--AIPP 182
Q N+ + R+L LDLS P F +L+ L +LN+ +N+ P
Sbjct: 481 FQENFLPDIFTELRNLTF--LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 538
Query: 183 LNLPRLKILNFSNNNLNGSIPDSLQTFPNS 212
L L++L++S N++ S LQ FP+S
Sbjct: 539 KCLNSLQVLDYSLNHIMTSKKQELQHFPSS 568
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 125 LQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG--AIPP 182
Q N+ + R+L LDLS P F +L+ L +LN+ +N+ P
Sbjct: 162 FQENFLPDIFTELRNLTF--LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 219
Query: 183 LNLPRLKILNFSNNNLNGSIPDSLQTFPNS 212
L L++L++S N++ S LQ FP+S
Sbjct: 220 KCLNSLQVLDYSLNHIMTSKKQELQHFPSS 249
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 125 LQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG--AIPP 182
Q N+ + R+L LDLS P F +L+ L +LN+ +N+ P
Sbjct: 457 FQENFLPDIFTELRNLTF--LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 514
Query: 183 LNLPRLKILNFSNNNLNGSIPDSLQTFPNS 212
L L++L++S N++ S LQ FP+S
Sbjct: 515 KCLNSLQVLDYSLNHIMTSKKQELQHFPSS 544
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFE------------QQMEVVGTIGKH 389
+ GSYG+ + +G V +KR+ + R +++ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HH 88
Query: 390 SNVVPVRAYYYSKDE----KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
N++ +R + +E KL + + + L ++H R I LG
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRA 502
+H A H ++ N+LL + + I D LA T + YRA
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 503 PE-VTETRKASQKSDVYSFGVLLLEMLTGKA 532
PE V + + ++ D++S G ++ EM KA
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 342 LGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFE------------QQMEVVGTIGKH 389
+ GSYG+ + +G V +KR+ + R +++ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HH 88
Query: 390 SNVVPVRAYYYSKDE----KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445
N++ +R + +E KL + + + L ++H R I LG
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIG---YRA 502
+H A H ++ N+LL + + I D LA T + YRA
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 503 PE-VTETRKASQKSDVYSFGVLLLEMLTGKA 532
PE V + + ++ D++S G ++ EM KA
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+++ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 230 EMAAGYPPF 238
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 90 IGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSF 149
I L L LSL N + P + S++SL Y N + + P +LN+L +
Sbjct: 173 IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPVANXTRLNSLKIGN 230
Query: 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNG-SIPDSLQT 208
N T P NL++L L + N IS +L +LK LN +N ++ S+ ++L
Sbjct: 231 NKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISDISVLNNLSQ 288
Query: 209 FPNSSFVGNSML 220
NS F+ N+ L
Sbjct: 289 L-NSLFLNNNQL 299
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 20/206 (9%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIG---KHSNVVPV 395
E LGKG++ + + + G K + + R+ Q++E I KH N+V +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRL 68
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
+ +V+ + G LF + A ++ S + + + ++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELF--------EDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 456 GAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA----TRTIGYRAPEVTET 508
H ++K N+LL G ++D GLA + A T GY +PEV
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
+ D+++ GV+L +L G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 105 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 156
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ + ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 157 ENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 216
Query: 526 EMLTGKAPL 534
EM G P
Sbjct: 217 EMAAGYPPF 225
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 85/231 (36%), Gaps = 42/231 (18%)
Query: 342 LGKGSYGSTYKA-ILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400
+G G++G +++ VK +R + R + + +++ I Y+
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYH 102
Query: 401 SKDEKLVVYSYM-----PAG-SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE 454
K + Y +M P G SL+ ++ RN +G D I L + ++
Sbjct: 103 GK---FMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIED------IKLYCIEILKALNYL 153
Query: 455 GGAKFTHGNIKSSNVLL-------------------------TQDLNGCISDVGLAHLI- 488
TH ++K N+LL T+ + D G A
Sbjct: 154 RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS 213
Query: 489 NFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539
++ + T YRAPEV SD++SFG +L E+ TG + H
Sbjct: 214 DYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH 264
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKS 466
+V Y+ G +F L R G + ++R A ++HS + ++K
Sbjct: 118 MVMEYVAGGEMFSHLRRI----GRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 467 SNVLLTQDLNGCISDVGLAHLINFPTTA-TRTIGYRAPEVTETRKASQKSDVYSFGVLLL 525
N+L+ Q ++D G A + T T Y APE+ ++ ++ D ++ GVL+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 526 EMLTGKAPL 534
+M G P
Sbjct: 230 QMAAGYPPF 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 20/206 (9%)
Query: 340 EVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIG---KHSNVVPV 395
E LGKG++ + + + G K + + R+ Q++E I KH N+V +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRL 68
Query: 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG 455
+ +V+ + G LF + A ++ S + + + ++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELF--------EDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 456 GAKFTHGNIKSSNVLLTQDLNGC---ISDVGLAHLINFPTTA----TRTIGYRAPEVTET 508
H ++K N+LL G ++D GLA + A T GY +PEV
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 509 RKASQKSDVYSFGVLLLEMLTGKAPL 534
+ D+++ GV+L +L G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 24/129 (18%)
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVL--------LTQDLNGC-----------IS 480
+A + F+H + TH ++K N+L L + C ++
Sbjct: 137 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 481 DVGLAHLIN-FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSG 538
D G A + TT T YR PEV +Q DV+S G +L E G Q H
Sbjct: 194 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 253
Query: 539 HDDVVDLPR 547
+ +V + +
Sbjct: 254 REHLVMMEK 262
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 24/129 (18%)
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVL--------LTQDLNGC-----------IS 480
+A + F+H + TH ++K N+L L + C ++
Sbjct: 128 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 481 DVGLAHLIN-FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSG 538
D G A + TT T YR PEV +Q DV+S G +L E G Q H
Sbjct: 185 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244
Query: 539 HDDVVDLPR 547
+ +V + +
Sbjct: 245 REHLVMMEK 253
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 89 SIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148
+I L ++K L L S + P + +S+LQ +YL N + + P L L +
Sbjct: 102 AIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIG 159
Query: 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIP 203
NA ++ P NL++L L +N IS P +LP L ++ NN ++ P
Sbjct: 160 -NAQVSDLTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP 212
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 24/129 (18%)
Query: 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVL--------LTQDLNGC-----------IS 480
+A + F+H + TH ++K N+L L + C ++
Sbjct: 160 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 481 DVGLAHLIN-FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ-HSG 538
D G A + TT T YR PEV +Q DV+S G +L E G Q H
Sbjct: 217 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 276
Query: 539 HDDVVDLPR 547
+ +V + +
Sbjct: 277 REHLVMMEK 285
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,909,420
Number of Sequences: 62578
Number of extensions: 688003
Number of successful extensions: 3613
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 659
Number of HSP's that attempted gapping in prelim test: 1936
Number of HSP's gapped (non-prelim): 1308
length of query: 627
length of database: 14,973,337
effective HSP length: 105
effective length of query: 522
effective length of database: 8,402,647
effective search space: 4386181734
effective search space used: 4386181734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)